BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042564
(498 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/460 (43%), Positives = 282/460 (61%), Gaps = 16/460 (3%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
FDFDLFVIG+GSGGVRAAR + G +V I E +GGTCVIRGCVPKK+
Sbjct: 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY----------RIGGTCVIRGCVPKKL 74
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYE 141
Y + + E + +GW+ + I F+W+KL+ K EI RL G+Y+ L N+ V +YE
Sbjct: 75 YFYASQYAQEFSKSIGFGWKYADPI-FNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYE 133
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR-AQRAPIPGQELAITSDEALSLEEL 200
V + +E++ + G ++S A+ ILIATG++ + I G +L +TS+E LE+L
Sbjct: 134 SRAVFVDEHTLELS-VTGERIS--AEKILIATGAKIVSNSAIKGSDLCLTSNEIFDLEKL 190
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
PK V++GGGYI VEFA+I+ G+G LL R +L LR FD ++R ++ + +GI++
Sbjct: 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISII 250
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKV 320
T+ ++ +E V+ +G+ I AD V+ ATGR PNT L L+ GV+V++ GAV V
Sbjct: 251 YEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVV 310
Query: 321 DENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPP 380
DE TNV IWAVGDVT + LTPVA+ + CF K F PDY + AVF P
Sbjct: 311 DEKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPE 370
Query: 381 LSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCG 440
+ VGLSEE A+ + K + ++ + F PMRN +SG EK MKLVVD E+ V+GA + G
Sbjct: 371 IGTVGLSEEDALHRYK-RVEIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLG 429
Query: 441 PEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTM 480
A EI Q I ++LK TK FD T+ +HP+ +EE VTM
Sbjct: 430 ENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTM 469
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 348 bits (892), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 204/469 (43%), Positives = 285/469 (60%), Gaps = 19/469 (4%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
FD+DLFVIG GSGGVR+ R +A G KV I E F GGTCVIRGCVPKK+
Sbjct: 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAE-EFR---------YGGTCVIRGCVPKKL 53
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYE 141
VY + F EDA +GW V E FDW KL+ K EI RL G+Y++ L+NAG ++ +
Sbjct: 54 YVYASQFAEHFEDAAGFGWTVGES-RFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILD 112
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR-AQRAPIPGQELAITSDEALSLEEL 200
++ GPN V +L + + +A+ I+IA G + +PG EL ITS+EA L L
Sbjct: 113 TRAELAGPNTV---KLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNEAFDLPAL 169
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P+ ++ GGGYIAVEFA+I+ G+G L++R + L FD + R + E +GI +
Sbjct: 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDXRRGLHAAXEEKGIRIL 229
Query: 261 PRTTIKELIKSEEGVKVIT--DHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAV 318
I+ + +G +V T HGE IVAD V A GR PNT L L+A GV ++ GA+
Sbjct: 230 CEDIIQSVSADADGRRVATTXKHGE-IVADQVXLALGRXPNTNGLGLEAAGVRTNELGAI 288
Query: 319 KVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCI 378
VD SRT+ P I+A+GDVT+R+ LTPVA+ E CF +T + P PD+ + AVF
Sbjct: 289 IVDAFSRTSTPGIYALGDVTDRVQLTPVAIHEAXCFIETEYKNNPTSPDHDLIATAVFSQ 348
Query: 379 PPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASM 438
P + VG++EE+A + + +I V+ + F P + T+SGR+EKT+ KLVV+A KV+GA +
Sbjct: 349 PEIGTVGITEEEAARKFQ-EIEVYRAEFRPXKATLSGRKEKTIXKLVVNAADRKVVGAHI 407
Query: 439 CGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRV 487
G +A E Q + ++L+ G TK FD T +HP++AEE VT + RV
Sbjct: 408 LGHDAGEXAQLLGISLRAGCTKDDFDRTXAVHPTAAEELVTXYQPSYRV 456
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 335 bits (859), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 281/478 (58%), Gaps = 28/478 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAK-VGICELPFHPISSEVIGGVGGTCVIRGCVPKKIL 82
+DL VIGAGSGG+ A +A+ K V + +L H +GGTCV GCVPKK++
Sbjct: 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPH-YAALGGTCVNVGCVPKKLM 62
Query: 83 VYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLY 140
V GA++ + ++ +GWE+ E + +WK L+ K + +N Y+ + ++ G+ +
Sbjct: 63 VTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFH 122
Query: 141 EGEGKI-----------VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI 189
+G G + PN + LD ++IL+ATGS Q I G +L I
Sbjct: 123 QGFGALQDNHTVLVRESADPNSAVLETLD-------TEYILLATGSWPQHLGIEGDDLCI 175
Query: 190 TSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRA 246
TS+EA L+E PKRA+ +GGGYI++EFA I ++ G VDL +R ++ LRGFD E+R
Sbjct: 176 TSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRK 235
Query: 247 VVARNLEGRGINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ L GIN+ ++ K+ +G + V+ + G E DVV+ A GR P ++ L L
Sbjct: 236 QLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQL 295
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCK 365
+ GVEV + GA+KVD S+TNV +I+A+GDVT+R+ LTPVA+ EG F TVF +P
Sbjct: 296 EKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRA 355
Query: 366 PDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVM-KL 424
D+ V CAVF IPP+ V G EE A ++ + V+ SSF P+ + ISG K M ++
Sbjct: 356 TDHTKVACAVFSIPPMGVCGYVEEDAAKK-YDQVAVYESSFTPLMHNISGSTYKKFMVRI 414
Query: 425 VVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
V + +VLG M G +PEI+Q +A+ LK GA + F +T+G+HP+SAEE +MR+
Sbjct: 415 VTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRT 472
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 335 bits (858), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 280/478 (58%), Gaps = 28/478 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAK-VGICELPFHPISSEVIGGVGGTCVIRGCVPKKIL 82
+DL VIGAGSGG+ A +A+ K V + +L H +GGTCV GCVPKK++
Sbjct: 5 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPH-YAALGGTCVNVGCVPKKLM 63
Query: 83 VYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLY 140
V GA++ + ++ +GWE+ E + +WK L+ K + +N Y+ + ++ G+ +
Sbjct: 64 VTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFH 123
Query: 141 EGEGKI-----------VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI 189
+G G + PN + LD ++IL+ATGS Q I G +L I
Sbjct: 124 QGWGALQDNHTVLVRESADPNSAVLETLD-------TEYILLATGSWPQHLGIEGDDLCI 176
Query: 190 TSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRA 246
TS+EA L+E PKRA+ +GGGYI++EFA I ++ G VDL +R ++ LRGFD E+R
Sbjct: 177 TSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRK 236
Query: 247 VVARNLEGRGINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ L GIN+ ++ K+ +G + V+ + G E DVV+ A GR P ++ L L
Sbjct: 237 QLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQL 296
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCK 365
GVEV + GA+KVD S+TNV +I+A+GDVT+R+ LTPVA+ EG F TVF +P
Sbjct: 297 DKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRA 356
Query: 366 PDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVM-KL 424
D+ V CAVF IPP+ V G EE A ++ + V+ SSF P+ + ISG K M ++
Sbjct: 357 TDHTKVACAVFSIPPMGVCGYVEEDAAKK-YDQVAVYESSFTPLMHNISGSTYKKFMVRI 415
Query: 425 VVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
V + +VLG M G +PEI+Q +A+ LK GA + F +T+G+HP+SAEE +MR+
Sbjct: 416 VTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRT 473
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 335 bits (858), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 280/478 (58%), Gaps = 28/478 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAK-VGICELPFHPISSEVIGGVGGTCVIRGCVPKKIL 82
+DL VIGAGSGG+ A +A+ K V + +L H +GGTCV GCVPKK++
Sbjct: 5 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPH-YAALGGTCVNVGCVPKKLM 63
Query: 83 VYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLY 140
V GA++ + ++ +GWE+ E + +WK L+ K + +N Y+ + ++ G+ +
Sbjct: 64 VTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFH 123
Query: 141 EGEGKI-----------VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI 189
+G G + PN + LD ++IL+ATGS Q I G +L I
Sbjct: 124 QGFGALQDNHTVLVRESADPNSAVLETLD-------TEYILLATGSWPQHLGIEGDDLCI 176
Query: 190 TSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRA 246
TS+EA L+E PKRA+ +GGGYI++EFA I ++ G VDL +R ++ LRGFD E+R
Sbjct: 177 TSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRK 236
Query: 247 VVARNLEGRGINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ L GIN+ ++ K+ +G + V+ + G E DVV+ A GR P ++ L L
Sbjct: 237 QLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQL 296
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCK 365
GVEV + GA+KVD S+TNV +I+A+GDVT+R+ LTPVA+ EG F TVF +P
Sbjct: 297 DKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRA 356
Query: 366 PDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVM-KL 424
D+ V CAVF IPP+ V G EE A ++ + V+ SSF P+ + ISG K M ++
Sbjct: 357 TDHTKVACAVFSIPPMGVCGYVEEDAAKK-YDQVAVYESSFTPLMHNISGSTYKKFMVRI 415
Query: 425 VVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
V + +VLG M G +PEI+Q +A+ LK GA + F +T+G+HP+SAEE +MR+
Sbjct: 416 VTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRT 473
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 332 bits (851), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/478 (39%), Positives = 280/478 (58%), Gaps = 28/478 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAK-VGICELPFHPISSEVIGGVGGTCVIRGCVPKKIL 82
+DL VIGAGSGG+ A +A+ K V + +L H +GGTCV GCVPKK++
Sbjct: 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPH-YAALGGTCVNVGCVPKKLM 62
Query: 83 VYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLY 140
V GA++ + ++ +GWE+ E + +WK L+ K + +N Y+ + ++ G+ +
Sbjct: 63 VTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFH 122
Query: 141 EGEGKI-----------VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI 189
+G G + PN + LD ++IL+ATGS Q I G +L I
Sbjct: 123 QGFGALQDNHTVLVRESADPNSAVLETLD-------TEYILLATGSWPQHLGIEGDDLCI 175
Query: 190 TSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRA 246
TS+EA L+E PKRA+ +GGGYI++EFA I ++ G VDL +R ++ LRGFD E+R
Sbjct: 176 TSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRK 235
Query: 247 VVARNLEGRGINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ L GIN+ ++ K+ +G + V+ + G E DVV+ A GR P ++ L L
Sbjct: 236 QLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQL 295
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCK 365
+ GVEV + GA+KVD S+TNV +I+A+GDVT+R+ LTPVA+ EG F TVF +P
Sbjct: 296 EKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRA 355
Query: 366 PDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVM-KL 424
D+ V CAVF IPP+ V G EE A ++ + V+ SSF P+ + ISG K M ++
Sbjct: 356 TDHTKVACAVFSIPPMGVCGYVEEDAAKK-YDQVAVYESSFTPLMHNISGSTYKKFMVRI 414
Query: 425 VVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
V + +VLG M G +PEI+Q +A+ LK GA + +T+G+HP+SAEE +MR+
Sbjct: 415 VTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDVYNTIGVHPTSAEELCSMRT 472
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 328 bits (840), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 284/488 (58%), Gaps = 20/488 (4%)
Query: 24 FDLFVIGAGSGGVRAARFSA-NFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKIL 82
+DL V+GAGSGG+ A +A KV + ++ + +GGTCV GCVPKK++
Sbjct: 25 YDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQ-ATHGPPLFAALGGTCVNVGCVPKKLM 83
Query: 83 VYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLY 140
V GA + + ++ +GWE+ E + +WK L+ K + +N YK + ++ G+ +
Sbjct: 84 VTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFH 143
Query: 141 EGEGKIVGPNEVEVTQLDGTKL----SYSAKHILIATGSRAQRAPIPGQELAITSDEALS 196
G G + + V V + + + ++ILIATGS R +PG E ITS+EA
Sbjct: 144 MGFGALQDAHTVVVRKSEDPHSDVLETLDTEYILIATGSWPTRLGVPGDEFCITSNEAFY 203
Query: 197 LEELPKRAVVLGGGYIAVEFASIWRGM---GSTVDLLFRKELPLRGFDDEMRAVVARNLE 253
LE+ PKR + +GGGYIAVEFA I+ G G VDL +R +L LRGFD E+R + + L
Sbjct: 204 LEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLG 263
Query: 254 GRGINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEV 312
GI + ++ K+E+G V + G E D V+ A GR P ++ L L GV
Sbjct: 264 ANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRT 323
Query: 313 DQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVP 372
+ GAV+VD S+T+V +I+A+GDVTNR+ LTPVA+ EG F +TVFGG+P D+ V
Sbjct: 324 GKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAINEGAAFVETVFGGKPRATDHTKVA 383
Query: 373 CAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVM-KLVVDAETE 431
CAVF IPP+ G++EE+A + + + V+ SSF P+ + ISG + K M +++ +
Sbjct: 384 CAVFSIPPIGTCGMTEEEAAKNYE-TVAVYASSFTPLMHNISGSKHKEFMIRIITNESNG 442
Query: 432 KVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVT------R 485
+VLG M G APEI+Q + + +K GA + F ST+G+HP+SAEE +MR+ +
Sbjct: 443 EVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEELCSMRTPAYFYESGK 502
Query: 486 RVAAASSN 493
RV SSN
Sbjct: 503 RVEKLSSN 510
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 328 bits (840), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 284/488 (58%), Gaps = 20/488 (4%)
Query: 24 FDLFVIGAGSGGVRAARFSA-NFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKIL 82
+DL V+GAGSGG+ A +A KV + ++ + +GGTCV GCVPKK++
Sbjct: 25 YDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQ-ATHGPPLFAALGGTCVNVGCVPKKLM 83
Query: 83 VYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLY 140
V GA + + ++ +GWE+ E + +WK L+ K + +N YK + ++ G+ +
Sbjct: 84 VTGAQYMDLIRESGGFGWEMDRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFH 143
Query: 141 EGEGKIVGPNEVEVTQLDGTKL----SYSAKHILIATGSRAQRAPIPGQELAITSDEALS 196
G G + + V V + + + ++ILIATGS R +PG E ITS+EA
Sbjct: 144 MGFGALQDAHTVVVRKSEDPHSDVLETLDTEYILIATGSWPTRLGVPGDEFCITSNEAFY 203
Query: 197 LEELPKRAVVLGGGYIAVEFASIWRGM---GSTVDLLFRKELPLRGFDDEMRAVVARNLE 253
LE+ PKR + +GGGYIAVEFA I+ G G VDL +R +L LRGFD E+R + + L
Sbjct: 204 LEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLG 263
Query: 254 GRGINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEV 312
GI + ++ K+E+G V + G E D V+ A GR P ++ L L GV
Sbjct: 264 ANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRT 323
Query: 313 DQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVP 372
+ GAV+VD S+T+V +I+A+GDVTNR+ LTPVA+ EG F +TVFGG+P D+ V
Sbjct: 324 GKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAINEGAAFVETVFGGKPRATDHTKVA 383
Query: 373 CAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVM-KLVVDAETE 431
CAVF IPP+ G++EE+A + + + V+ SSF P+ + ISG + K M +++ +
Sbjct: 384 CAVFSIPPIGTCGMTEEEAAKNYE-TVAVYASSFTPLMHNISGSKHKEFMIRIITNESNG 442
Query: 432 KVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVT------R 485
+VLG M G APEI+Q + + +K GA + F ST+G+HP+SAEE +MR+ +
Sbjct: 443 EVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEELCSMRTPAYFYESGK 502
Query: 486 RVAAASSN 493
RV SSN
Sbjct: 503 RVEKLSSN 510
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 325 bits (833), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 190/477 (39%), Positives = 277/477 (58%), Gaps = 26/477 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSAN-FGAKVGICEL------PFHPISSEVIGGVGGTCVIRGC 76
FDL VIGAGSGG+ A +A +G +V + ++ PF+ +GGTCV GC
Sbjct: 5 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFY-------AALGGTCVNVGC 57
Query: 77 VPKKILVYGASFGGELEDARSYGWEVH-EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA 135
VPKK++V GA + L ++ +GWE + +WKKL+ K + +L +N Y+ + ++
Sbjct: 58 VPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDT 117
Query: 136 -GVKLYEGEGKIVGPNEVEVTQL----DGTKLSYSAKHILIATGSRAQRAPIPGQELAIT 190
G+ + G G + N V V + K A HIL+ATGS Q IPG E I+
Sbjct: 118 EGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCIS 177
Query: 191 SDEALSLEELPKRAVVLGGGYIAVEFASIWRGM---GSTVDLLFRKELPLRGFDDEMRAV 247
S+EA L E P+R + +GGG+I+VEFA I+ G V L +R L LRGFD+ +R
Sbjct: 178 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREE 237
Query: 248 VARNLEGRGINLHPRTTIKELIKSEEGVKVIT-DHGEEIVADVVLFATGRAPNTKRLNLK 306
V + L GI + ++ + +G K +T + G+ + DVV+ A GR P T L L
Sbjct: 238 VTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLG 297
Query: 307 AVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKP 366
VGV++ G V+VDE SRTNVP+I+A+GD+T+R+ LTPVA+ EG TVFG +P K
Sbjct: 298 NVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKT 357
Query: 367 DYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISG-RQEKTVMKLV 425
D+ V AVF IPP+ GL EE A ++ + + V+ SSF P+ + ISG + +K V K+V
Sbjct: 358 DHTRVASAVFSIPPIGTCGLIEEVAAKEFE-KVAVYMSSFTPLMHNISGSKYKKFVAKIV 416
Query: 426 VDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
+ VLG + G APEI+Q + V L+ A + F +T+G+HP+SAEE +MR+
Sbjct: 417 TNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRT 473
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 325 bits (833), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 190/477 (39%), Positives = 277/477 (58%), Gaps = 26/477 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSAN-FGAKVGICEL------PFHPISSEVIGGVGGTCVIRGC 76
FDL VIGAGSGG+ A +A +G +V + ++ PF+ +GGTCV GC
Sbjct: 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFY-------AALGGTCVNVGC 60
Query: 77 VPKKILVYGASFGGELEDARSYGWEVH-EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA 135
VPKK++V GA + L ++ +GWE + +WKKL+ K + +L +N Y+ + ++
Sbjct: 61 VPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDT 120
Query: 136 -GVKLYEGEGKIVGPNEVEVTQL----DGTKLSYSAKHILIATGSRAQRAPIPGQELAIT 190
G+ + G G + N V V + K A HIL+ATGS Q IPG E I+
Sbjct: 121 EGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCIS 180
Query: 191 SDEALSLEELPKRAVVLGGGYIAVEFASIWRGM---GSTVDLLFRKELPLRGFDDEMRAV 247
S+EA L E P+R + +GGG+I+VEFA I+ G V L +R L LRGFD+ +R
Sbjct: 181 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREE 240
Query: 248 VARNLEGRGINLHPRTTIKELIKSEEGVKVIT-DHGEEIVADVVLFATGRAPNTKRLNLK 306
V + L GI + ++ + +G K +T + G+ + DVV+ A GR P T L L
Sbjct: 241 VTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLG 300
Query: 307 AVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKP 366
VGV++ G V+VDE SRTNVP+I+A+GD+T+R+ LTPVA+ EG TVFG +P K
Sbjct: 301 NVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKT 360
Query: 367 DYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISG-RQEKTVMKLV 425
D+ V AVF IPP+ GL EE A ++ + + V+ SSF P+ + ISG + +K V K+V
Sbjct: 361 DHTRVASAVFSIPPIGTCGLIEEVAAKEFE-KVAVYMSSFTPLMHNISGSKYKKFVAKIV 419
Query: 426 VDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
+ VLG + G APEI+Q + V L+ A + F +T+G+HP+SAEE +MR+
Sbjct: 420 TNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRT 476
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 318 bits (814), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 185/466 (39%), Positives = 263/466 (56%), Gaps = 20/466 (4%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
FDL IG GSGG+ A +A FG +V + E +GGTCV GCVPKK++
Sbjct: 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIESK----------ALGGTCVNVGCVPKKVMW 54
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
Y + + DA +G + DW +L+ + I +N + + G+ +G
Sbjct: 55 YASHLAEAVRDAPGFGVQASGGT-LDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGH 113
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKR 203
+ V + +EV +G +LS A HI+IATG R +PG EL ITSD +L++ PKR
Sbjct: 114 ARFVDAHTIEV---EGQRLS--ADHIVIATGGRPIVPRLPGAELGITSDGFFALQQQPKR 168
Query: 204 AVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRT 263
++G GYI +E A + R GS V ++ ++ L FD + A +A N+ +GI H
Sbjct: 169 VAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEF 228
Query: 264 TIKELIKSEEGVKVITDHGEEIVA-DVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDE 322
+ L + +G ++ G + D V++A GRAPNT+ L L+A G+EV G V D
Sbjct: 229 AVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDA 288
Query: 323 NSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQP-CKPDYRDVPCAVFCIPPL 381
TNVP ++A+GD+T R LTPVA+ G A+ +F GQ K DY ++P VF PPL
Sbjct: 289 YQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPL 348
Query: 382 SVVGLSEEQAIEQGKGDIL-VFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCG 440
S VGLSE +A E+ GD+L V+ +SF PMR ++ KT MKLV ++V+G + G
Sbjct: 349 SKVGLSEPEARER-LGDVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIG 407
Query: 441 PEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
A E++QG AVA+K GATKA FD+TV IHP SAEE VT++ RR
Sbjct: 408 DGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEELVTLKEPVRR 453
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 275/477 (57%), Gaps = 27/477 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSAN-FGAKVGICEL------PFHPISSEVIGGVGGTCVIRGC 76
FDL VIGAGSGG+ AA +A + +V + ++ PF +GGTCV GC
Sbjct: 5 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPF-------FSALGGTCVNVGC 57
Query: 77 VPKKILVYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA 135
VPKK++V GA + L ++ +GWE + +WK L+ K + +L +N Y + +
Sbjct: 58 VPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDT 117
Query: 136 -GVKLYEGEGKIVGPNEVEVTQ----LDGTKLSYSAKHILIATGSRAQRAPIPGQELAIT 190
G++ + G G + N V V + K +HIL+A+GS IPG E I+
Sbjct: 118 EGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIEHCIS 177
Query: 191 SDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRAV 247
S+EA L E P+R + +GGG+I+VEFA I ++ V L +R E+ LRGFD +R
Sbjct: 178 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREE 237
Query: 248 VARNLEGRGINLHPRTTIKELIKSEEGVKVIT-DHGEEIVADVVLFATGRAPNTKRLNLK 306
+ + L GI + + ++ + +G K +T + G+++ D+V+ A GR+P TK L L+
Sbjct: 238 LTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 297
Query: 307 AVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKP 366
GV + + G V+VDE SRTNV +I+A+GDVTNR+ LTPVA+ E TVFG P K
Sbjct: 298 NAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTTPRKT 356
Query: 367 DYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT-VMKLV 425
D+ V AVF IPP+ GL EE A ++ + + V+ SSF P+ + +SG + KT V K++
Sbjct: 357 DHTRVASAVFSIPPIGTCGLIEEVASKRYE-VVAVYLSSFTPLMHKVSGSKYKTFVAKII 415
Query: 426 VDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
+ VLG + G APEI+QGI + LK A + F +T+G+HP+SAEE +MR+
Sbjct: 416 TNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEELCSMRT 472
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 308 bits (789), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 277/477 (58%), Gaps = 27/477 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSAN-FGAKVGICEL------PFHPISSEVIGGVGGTCVIRGC 76
FDL VIGAGSGG+ AA +A + +V + ++ PF +GGTCV GC
Sbjct: 5 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPF-------FSALGGTCVNVGC 57
Query: 77 VPKKILVYGASFGGELEDARSYGWEVHEK-IDFDWKKLLQKKTDEILRLNGIYKRLLSNA 135
VPKK++V GA + L ++ +GWE + +WKKL+ K + +L +N Y+ + +
Sbjct: 58 VPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDT 117
Query: 136 -GVKLYEGEGKIVGPNEVEVTQ----LDGTKLSYSAKHILIATGSRAQRAPIPGQELAIT 190
G++ + G G + N V V + K ++IL+A+GS IPG E I+
Sbjct: 118 EGLEFFLGWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPHMPNIPGIEHCIS 177
Query: 191 SDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRAV 247
S+EA L E P+R + +GGG+I+VEFA I ++ V L +R E+ LRGFD +R
Sbjct: 178 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREE 237
Query: 248 VARNLEGRGINLHPRTTIKELIKSEEGVKVIT-DHGEEIVADVVLFATGRAPNTKRLNLK 306
+ + L GI + + ++ + +G K +T + G+++ D+V+ A GR+P TK L L+
Sbjct: 238 LTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 297
Query: 307 AVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKP 366
GV + + G V+VDE SRTNV +I+A+GDVTNR+ LTPVA+ E TVFG P K
Sbjct: 298 NAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTNPRKT 356
Query: 367 DYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT-VMKLV 425
D+ V AVF IPP+ GL EE A ++ + + V+ SSF P+ + ISG + KT V K++
Sbjct: 357 DHTRVASAVFSIPPIGTCGLIEEVASKRYE-VVAVYLSSFTPLMHNISGSKYKTFVAKII 415
Query: 426 VDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
+ VLG + G APEI+QG+ + LK A + F +T+G+HP+SAEE +MR+
Sbjct: 416 TNHSDGTVLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGVHPTSAEELCSMRT 472
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 308 bits (789), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 275/477 (57%), Gaps = 27/477 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSAN-FGAKVGICEL------PFHPISSEVIGGVGGTCVIRGC 76
FDL VIGAGSGG+ AA +A + +V + ++ PF +GGTCV GC
Sbjct: 4 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPF-------FSALGGTCVNVGC 56
Query: 77 VPKKILVYGASFGGELEDARSYGWEVHEK-IDFDWKKLLQKKTDEILRLNGIYKRLLSNA 135
VPKK++V GA + L ++ +GWE + +WK L+ K + +L +N Y + +
Sbjct: 57 VPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDT 116
Query: 136 -GVKLYEGEGKIVGPNEVEVTQ----LDGTKLSYSAKHILIATGSRAQRAPIPGQELAIT 190
G++ + G G + N V V + K +HIL+A+GS IPG E I+
Sbjct: 117 EGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIEHCIS 176
Query: 191 SDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRAV 247
S+EA L E P+R + +GGG+I+VEFA I ++ V L +R E+ LRGFD +R
Sbjct: 177 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREE 236
Query: 248 VARNLEGRGINLHPRTTIKELIKSEEGVKVIT-DHGEEIVADVVLFATGRAPNTKRLNLK 306
+ + L GI + + ++ + +G K +T + G+++ D+V+ A GR+P TK L L+
Sbjct: 237 LTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 296
Query: 307 AVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKP 366
GV + + G V+VDE SRTNV +I+A+GDVTNR+ LTPVA+ E TVFG P K
Sbjct: 297 NAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTTPRKT 355
Query: 367 DYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT-VMKLV 425
D+ V AVF IPP+ GL EE A ++ + + V+ SSF P+ + +SG + KT V K++
Sbjct: 356 DHTRVASAVFSIPPIGTCGLIEEVASKRYE-VVAVYLSSFTPLMHKVSGSKYKTFVAKII 414
Query: 426 VDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
+ VLG + G APEI+QGI + LK A + F +T+G+HP+SAEE +MR+
Sbjct: 415 TNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEELCSMRT 471
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 308 bits (789), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 275/477 (57%), Gaps = 27/477 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSAN-FGAKVGICEL------PFHPISSEVIGGVGGTCVIRGC 76
FDL VIGAGSGG+ AA +A + +V + ++ PF +GGTCV GC
Sbjct: 6 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPF-------FSALGGTCVNVGC 58
Query: 77 VPKKILVYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA 135
VPKK++V GA + L ++ +GWE + +WK L+ K + +L +N Y + +
Sbjct: 59 VPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDT 118
Query: 136 -GVKLYEGEGKIVGPNEVEVTQ----LDGTKLSYSAKHILIATGSRAQRAPIPGQELAIT 190
G++ + G G + N V V + K +HIL+A+GS IPG E I+
Sbjct: 119 EGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIEHCIS 178
Query: 191 SDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRAV 247
S+EA L E P+R + +GGG+I+VEFA I ++ V L +R E+ LRGFD +R
Sbjct: 179 SNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREE 238
Query: 248 VARNLEGRGINLHPRTTIKELIKSEEGVKVIT-DHGEEIVADVVLFATGRAPNTKRLNLK 306
+ + L GI + + ++ + +G K +T + G+++ D+V+ A GR+P TK L L+
Sbjct: 239 LTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQ 298
Query: 307 AVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKP 366
GV + + G V+VDE SRTNV +I+A+GDVTNR+ LTPVA+ E TVFG P K
Sbjct: 299 NAGVMI-KNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTTPRKT 357
Query: 367 DYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT-VMKLV 425
D+ V AVF IPP+ GL EE A ++ + + V+ SSF P+ + +SG + KT V K++
Sbjct: 358 DHTRVASAVFSIPPIGTCGLIEEVASKRYE-VVAVYLSSFTPLMHKVSGSKYKTFVAKII 416
Query: 426 VDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482
+ VLG + G APEI+QGI + LK A + F +T+G+HP+SAEE +MR+
Sbjct: 417 TNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEELCSMRT 473
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/478 (38%), Positives = 266/478 (55%), Gaps = 40/478 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +A +A GA+ + E H + GGTCV GCVPKK++
Sbjct: 4 YDYLVIGGGSGGLESAWRAAELGARAAVVE--SHKL--------GGTCVNVGCVPKKVMW 53
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
A + D YG+ E F+W+ + +K+ + RLN IY+ L+ + +++ G
Sbjct: 54 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 112
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEEL 200
+ + ++ G K Y+A HILIATG S + IPG L ITSD LEEL
Sbjct: 113 AAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 169
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+ +
Sbjct: 170 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 229
Query: 261 PRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ +KE+ K+ G++V I D D +L+A GR PNTK L+L
Sbjct: 230 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDCLLWAIGRVPNTKDLSL 283
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQPC 364
+G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 284 NKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDS 343
Query: 365 KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMK 423
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K VMK
Sbjct: 344 KLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 403
Query: 424 LVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 404 MVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 461
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/478 (38%), Positives = 266/478 (55%), Gaps = 40/478 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +A +A GA+ + E H + GGTCV GCVPKK++
Sbjct: 21 YDYLVIGGGSGGLESAWRAAELGARAAVVE--SHKL--------GGTCVNVGCVPKKVMW 70
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
A + D YG+ E F+W+ + +K+ + RLN IY+ L+ + +++ G
Sbjct: 71 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEEL 200
+ + ++ G K Y+A HILIATG S + IPG L ITSD LEEL
Sbjct: 130 AAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 186
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+ +
Sbjct: 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 246
Query: 261 PRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ +KE+ K+ G++V I D D +L+A GR PNTK L+L
Sbjct: 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDCLLWAIGRVPNTKDLSL 300
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQPC 364
+G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 301 NKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDS 360
Query: 365 KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMK 423
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K VMK
Sbjct: 361 KLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 420
Query: 424 LVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 421 MVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 267/478 (55%), Gaps = 40/478 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +AR +A GA+ + E H + GGTCV GCVPKK++
Sbjct: 4 YDYLVIGGGSGGLASARRAAELGARAAVVE--SHKL--------GGTCVNVGCVPKKVMW 53
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
A + D YG+ E F+W+ + +K+ + RLN IY+ L+ + +++ G
Sbjct: 54 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 112
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEEL 200
+ + ++ G K Y+A HILIATG S + IPG L ITSD LEEL
Sbjct: 113 AAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 169
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+ +
Sbjct: 170 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 229
Query: 261 PRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ +KE+ K+ G++V I D D +L+A GR PNTK L+L
Sbjct: 230 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDCLLWAIGRVPNTKDLSL 283
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQPC 364
+G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 284 NKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDS 343
Query: 365 KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMK 423
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K VMK
Sbjct: 344 KLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 403
Query: 424 LVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 404 MVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 461
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 267/478 (55%), Gaps = 40/478 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +AR +A GA+ + E H + GGTCV GCVPKK++
Sbjct: 20 YDYLVIGGGSGGLASARRAAELGARAAVVE--SHKL--------GGTCVNVGCVPKKVMW 69
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
A + D YG+ E F+W+ + +K+ + RLN IY+ L+ + +++ G
Sbjct: 70 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 128
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEEL 200
+ + ++ G K Y+A HILIATG S + IPG L ITSD LEEL
Sbjct: 129 AAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 185
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+ +
Sbjct: 186 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 245
Query: 261 PRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ +KE+ K+ G++V I D D +L+A GR PNTK L+L
Sbjct: 246 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDCLLWAIGRVPNTKDLSL 299
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQPC 364
+G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 300 NKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDS 359
Query: 365 KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMK 423
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K VMK
Sbjct: 360 KLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 419
Query: 424 LVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 420 MVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 477
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 267/478 (55%), Gaps = 40/478 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +AR +A GA+ + E H + GGTCV GCVPKK++
Sbjct: 21 YDYLVIGGGSGGLASARRAAELGARAAVVE--SHKL--------GGTCVNVGCVPKKVMW 70
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
A + D YG+ E F+W+ + +K+ + RLN IY+ L+ + +++ G
Sbjct: 71 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEEL 200
+ + ++ G K Y+A HILIATG S + IPG L ITSD LEEL
Sbjct: 130 AAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 186
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+ +
Sbjct: 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 246
Query: 261 PRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ +KE+ K+ G++V I D D +L+A GR PNTK L+L
Sbjct: 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDCLLWAIGRVPNTKDLSL 300
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQPC 364
+G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 301 NKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDS 360
Query: 365 KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMK 423
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K VMK
Sbjct: 361 KLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 420
Query: 424 LVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 421 MVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 267/478 (55%), Gaps = 40/478 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +AR +A GA+ + E H + GGTCV GCVPKK++
Sbjct: 22 YDYLVIGGGSGGLASARRAAELGARAAVVE--SHKL--------GGTCVNVGCVPKKVMW 71
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
A + D YG+ E F+W+ + +K+ + RLN IY+ L+ + +++ G
Sbjct: 72 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 130
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEEL 200
+ + ++ G K Y+A HILIATG S + IPG L ITSD LEEL
Sbjct: 131 AAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 187
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+ +
Sbjct: 188 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 247
Query: 261 PRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ +KE+ K+ G++V I D D +L+A GR PNTK L+L
Sbjct: 248 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDCLLWAIGRVPNTKDLSL 301
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQPC 364
+G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 302 NKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDS 361
Query: 365 KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMK 423
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K VMK
Sbjct: 362 KLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 421
Query: 424 LVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 422 MVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 479
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 184/478 (38%), Positives = 266/478 (55%), Gaps = 40/478 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +AR +A GA+ + E H + GGTCV G VPKK++
Sbjct: 21 YDYLVIGGGSGGLASARRAAELGARAAVVE--SHKL--------GGTCVNVGXVPKKVMW 70
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
A + D YG+ E F+W+ + +K+ + RLN IY+ L+ + +++ G
Sbjct: 71 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEEL 200
+ + ++ G K Y+A HILIATG S + IPG L ITSD LEEL
Sbjct: 130 AAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 186
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+ +
Sbjct: 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNXTEELENAGVEVL 246
Query: 261 PRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ +KE+ K+ G++V I D D +L+A GR PNTK L+L
Sbjct: 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDXLLWAIGRVPNTKDLSL 300
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQPC 364
+G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 301 NKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDS 360
Query: 365 KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMK 423
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K VMK
Sbjct: 361 KLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 420
Query: 424 LVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 421 MVXANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 291 bits (745), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 184/478 (38%), Positives = 266/478 (55%), Gaps = 40/478 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +AR +A GA+ + E H + GGT V GCVPKK++
Sbjct: 21 YDYLVIGGGSGGLASARRAAELGARAAVVE--SHKL--------GGTXVNVGCVPKKVMW 70
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
A + D YG+ E F+W+ + +K+ + RLN IY+ L+ + +++ G
Sbjct: 71 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEEL 200
+ + ++ G K Y+A HILIATG S + IPG L ITSD LEEL
Sbjct: 130 AAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 186
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+ +
Sbjct: 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 246
Query: 261 PRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ +KE+ K+ G++V I D D +L+A GR PNTK L+L
Sbjct: 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDCLLWAIGRVPNTKDLSL 300
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQPC 364
+G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 301 NKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDS 360
Query: 365 KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMK 423
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K VMK
Sbjct: 361 KLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 420
Query: 424 LVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 421 MVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 291 bits (745), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 184/478 (38%), Positives = 266/478 (55%), Gaps = 40/478 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +AR +A GA+ + E H + GGTCV G VPKK++
Sbjct: 21 YDYLVIGGGSGGLASARRAAELGARAAVVE--SHKL--------GGTCVNVGXVPKKVMW 70
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
A + D YG+ E F+W+ + +K+ + RLN IY+ L+ + +++ G
Sbjct: 71 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 129
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEEL 200
+ + ++ G K Y+A HILIATG S + IPG L ITSD LEEL
Sbjct: 130 AAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 186
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+ +
Sbjct: 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVL 246
Query: 261 PRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRLNL 305
+ +KE+ K+ G++V I D D +L+A GR PNTK L+L
Sbjct: 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDCLLWAIGRVPNTKDLSL 300
Query: 306 KAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQPC 364
+G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 301 NKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDS 360
Query: 365 KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMK 423
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K VMK
Sbjct: 361 KLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 420
Query: 424 LVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 421 MVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 478
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 287 bits (735), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 185/480 (38%), Positives = 267/480 (55%), Gaps = 42/480 (8%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGG+ +AR +A GA+ + E H + GGTCV GCVPKK++
Sbjct: 4 YDYLVIGGGSGGLASARRAAELGARAAVVE--SHKL--------GGTCVNVGCVPKKVMW 53
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKK-TDEILRLNGI-YKRLLSNAGVKLYE 141
A + D YG+ E F+W+ + +K+ + RLN I Y+ L+ + +++
Sbjct: 54 NTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAXYVSRLNAIXYQNNLTKSHIEIIR 112
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLE 198
G + + ++ G K Y+A HILIATG S + IPG L ITSD LE
Sbjct: 113 GHAAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLE 169
Query: 199 ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN 258
ELP R+V++G GYIAVE A I +GS L+ R + LR FD + LE G+
Sbjct: 170 ELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVE 229
Query: 259 LHPRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGRAPNTKRL 303
+ + +KE+ K+ G++V I D D +L+A GR PNTK L
Sbjct: 230 VLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPD------VDCLLWAIGRVPNTKDL 283
Query: 304 NLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF-GGQ 362
+L +G++ D G + VDE TNV I+AVGDV + LTPVA+ G A +F +
Sbjct: 284 SLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKE 343
Query: 363 PCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTV 421
K DY ++P VF PP+ VGL+E++AI + G ++ +++SF PM + ++ R+ K V
Sbjct: 344 DSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCV 403
Query: 422 MKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
MK+V + EKV+G M G E++QG AVA+K GATKA FD+TV IHP+S+EE VT+R
Sbjct: 404 MKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR 463
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 284 bits (727), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 282/484 (58%), Gaps = 18/484 (3%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
+D+DL +IG GSGG+ AA+ +A +G KV + + P G+GGTCV GC+PKK+
Sbjct: 33 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDF-VTPTPLGTRWGLGGTCVNVGCIPKKL 91
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYE 141
+ A G L+D+R+YGW+V E + DW ++++ + I LN Y+ L V
Sbjct: 92 MHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYEN 151
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEEL 200
G+ +GP+ ++ T G + YSA+ LIATG R + IPG +E I+SD+ SL
Sbjct: 152 AYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYC 211
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P + +V+G Y+A+E A G+G V ++ R L LRGFD +M + ++E GI
Sbjct: 212 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFI 270
Query: 261 PRTTIKELIKSEEG----VKVI--TDHGEEIV---ADVVLFATGRAPNTKRLNLKAVGVE 311
+ ++ + E G ++V+ + + EEI+ + V+ A GR T+++ L+ VGV+
Sbjct: 271 RQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVK 330
Query: 312 VDQ-TGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYR 369
+++ TG + V + +TNVP I+A+GD+ +++ LTPVA+ G A+ ++ G K DY
Sbjct: 331 INEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYE 390
Query: 370 DVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGR-QEKTVMKLVVD 427
+VP VF GLSEE+A+E+ G+ +I V+ S F P+ TI R K K++ +
Sbjct: 391 NVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICN 450
Query: 428 A-ETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
+ E+V+G + GP A E+ QG A ALKCG TK Q DST+GIHP AE F T+ SVT+R
Sbjct: 451 TKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTL-SVTKR 509
Query: 487 VAAA 490
A+
Sbjct: 510 SGAS 513
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 284 bits (726), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 282/484 (58%), Gaps = 18/484 (3%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
+D+DL +IG GSGG+ AA+ +A +G KV + + P G+GGTCV GC+PKK+
Sbjct: 25 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDF-VTPTPLGTRWGLGGTCVNVGCIPKKL 83
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYE 141
+ A G L+D+R+YGW+V E + DW ++++ + I LN Y+ L V
Sbjct: 84 MHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYEN 143
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEEL 200
G+ +GP+ ++ T G + YSA+ LIATG R + IPG +E I+SD+ SL
Sbjct: 144 AYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYC 203
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P + +V+G Y+A+E A G+G V ++ R L LRGFD +M + ++E GI
Sbjct: 204 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFI 262
Query: 261 PRTTIKELIKSEEG----VKVI--TDHGEEIV---ADVVLFATGRAPNTKRLNLKAVGVE 311
+ ++ + E G ++V+ + + EEI+ + V+ A GR T+++ L+ VGV+
Sbjct: 263 RQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVK 322
Query: 312 VDQ-TGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYR 369
+++ TG + V + +TNVP I+A+GD+ +++ LTPVA+ G A+ ++ G K DY
Sbjct: 323 INEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYE 382
Query: 370 DVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGR-QEKTVMKLVVD 427
+VP VF GLSEE+A+E+ G+ +I V+ S F P+ TI R K K++ +
Sbjct: 383 NVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICN 442
Query: 428 A-ETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
+ E+V+G + GP A E+ QG A ALKCG TK Q DST+GIHP AE F T+ SVT+R
Sbjct: 443 TKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTL-SVTKR 501
Query: 487 VAAA 490
A+
Sbjct: 502 SGAS 505
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 284 bits (726), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 282/484 (58%), Gaps = 18/484 (3%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
+D+DL +IG GSGG+ AA+ +A +G KV + + P G+GGTCV GC+PKK+
Sbjct: 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDF-VTPTPLGTRWGLGGTCVNVGCIPKKL 89
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYE 141
+ A G L+D+R+YGW+V E + DW ++++ + I LN Y+ L V
Sbjct: 90 MHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYEN 149
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEEL 200
G+ +GP+ ++ T G + YSA+ LIATG R + IPG +E I+SD+ SL
Sbjct: 150 AYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYC 209
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P + +V+G Y+A+E A G+G V ++ R L LRGFD +M + ++E GI
Sbjct: 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFI 268
Query: 261 PRTTIKELIKSEEG----VKVI--TDHGEEIV---ADVVLFATGRAPNTKRLNLKAVGVE 311
+ ++ + E G ++V+ + + EEI+ + V+ A GR T+++ L+ VGV+
Sbjct: 269 RQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVK 328
Query: 312 VDQ-TGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYR 369
+++ TG + V + +TNVP I+A+GD+ +++ LTPVA+ G A+ ++ G K DY
Sbjct: 329 INEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYE 388
Query: 370 DVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGR-QEKTVMKLVVD 427
+VP VF GLSEE+A+E+ G+ +I V+ S F P+ TI R K K++ +
Sbjct: 389 NVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICN 448
Query: 428 A-ETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
+ E+V+G + GP A E+ QG A ALKCG TK Q DST+GIHP AE F T+ SVT+R
Sbjct: 449 TKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTL-SVTKR 507
Query: 487 VAAA 490
A+
Sbjct: 508 SGAS 511
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 284 bits (726), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 282/484 (58%), Gaps = 18/484 (3%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
+D+DL +IG GSGG+ AA+ +A +G KV + + P G+GGTCV GC+PKK+
Sbjct: 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDF-VTPTPLGTRWGLGGTCVNVGCIPKKL 89
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYE 141
+ A G L+D+R+YGW+V E + DW ++++ + I LN Y+ L V
Sbjct: 90 MHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYEN 149
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEEL 200
G+ +GP+ ++ T G + YSA+ LIATG R + IPG +E I+SD+ SL
Sbjct: 150 AYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYC 209
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P + +V+G Y+A+E A G+G V ++ R L LRGFD +M + ++E GI
Sbjct: 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFI 268
Query: 261 PRTTIKELIKSEEG----VKVI--TDHGEEIV---ADVVLFATGRAPNTKRLNLKAVGVE 311
+ ++ + E G ++V+ + + EEI+ + V+ A GR T+++ L+ VGV+
Sbjct: 269 RQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVK 328
Query: 312 VDQ-TGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYR 369
+++ TG + V + +TNVP I+A+GD+ +++ LTPVA+ G A+ ++ G K DY
Sbjct: 329 INEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYE 388
Query: 370 DVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGR-QEKTVMKLVVD 427
+VP VF GLSEE+A+E+ G+ +I V+ S F P+ TI R K K++ +
Sbjct: 389 NVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICN 448
Query: 428 A-ETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
+ E+V+G + GP A E+ QG A ALKCG TK Q DST+GIHP AE F T+ SVT+R
Sbjct: 449 TKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTL-SVTKR 507
Query: 487 VAAA 490
A+
Sbjct: 508 SGAS 511
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 259/471 (54%), Gaps = 24/471 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D VIG GSGGV +AR +A++GAK + E +GGTCV GCVPKK++
Sbjct: 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEAK----------ALGGTCVNVGCVPKKVMW 61
Query: 84 YGASFGGELEDARSYGWEVH-----EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVK 138
Y + + A YG + E + F+W + QK+ + RLNGIY++ L V
Sbjct: 62 YASDLATRVSHANEYGLYQNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVD 121
Query: 139 LYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSL 197
+ G + VEV + D T YSA HIL+ATG +A IPG EL SD L
Sbjct: 122 VVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGFELGTDSDGFFRL 181
Query: 198 EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGI 257
EE PK+ VV+G GYI +E A ++ G+GS L+ R E LR FD+ ++ + + GI
Sbjct: 182 EEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGI 241
Query: 258 NLHPRTTIKELIKSEEGVKV---ITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQ 314
N+H + I ++ K+ E K+ + D D +++ GR + + + VG++++
Sbjct: 242 NVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLG-MGSENVGIKLNS 300
Query: 315 TGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPC---KPDYRDV 371
+ DE TNVP+I+++GDV ++ LTPVA+ G + +FG + K DY +V
Sbjct: 301 HDQIIADEYQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENV 360
Query: 372 PCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAET 430
P +F P +G+SE++AIE+ GK +I V+ S F M + + T K+V
Sbjct: 361 PSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPN 420
Query: 431 EKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
EKV+G + G + EI+QG VA+K GATKA FD+ V IHP+SAEE VTMR
Sbjct: 421 EKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTMR 471
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 281 bits (719), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 183/480 (38%), Positives = 274/480 (57%), Gaps = 18/480 (3%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
+DFDL +IG GSGG+ AA+ +A F KV + + P G+GGTCV GC+PKK+
Sbjct: 11 YDFDLIIIGGGSGGLAAAKEAAKFDKKVMVLDF-VTPTPLGTNWGLGGTCVNVGCIPKKL 69
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYE 141
+ A G L+D+R+YGW++ + + DW+K+ + + I LN Y+ L V
Sbjct: 70 MHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYEN 129
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEEL 200
GK +GP+++ T G + YSA+ LIATG R + IPG +E I+SD+ SL
Sbjct: 130 AYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYC 189
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P + +V+G Y+A+E A G+G V ++ R L LRGFD +M + ++E GI
Sbjct: 190 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFI 248
Query: 261 PRTTIKELIKSEEG------VKVITDHGEEIVAD---VVLFATGRAPNTKRLNLKAVGVE 311
+ ++ + E G V + + EE + D VL A GR T+ + L+ VGV+
Sbjct: 249 RQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVK 308
Query: 312 VDQ-TGAVKVDENSRTNVPSIWAVGDVTN-RMNLTPVALMEGTCFAKTVFGGQPCKPDYR 369
+++ TG + V + +TNVP I+A+GD+ ++ LTPVA+ G A+ ++GG K DY
Sbjct: 309 INEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYD 368
Query: 370 DVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGR-QEKTVMKLVVD 427
+VP VF GLSEE+A+E+ G+ +I V+ S F P+ T+ R K K++ +
Sbjct: 369 NVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKVICN 428
Query: 428 -AETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
+ E+V+G + GP A E+ QG A ALKCG TK Q DST+GIHP AE F T+ SVT+R
Sbjct: 429 LKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAEIFTTL-SVTKR 487
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 281 bits (719), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 183/480 (38%), Positives = 274/480 (57%), Gaps = 18/480 (3%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
+DFDL +IG GSGG+ AA+ +A F KV + + P G+GGTCV GC+PKK+
Sbjct: 11 YDFDLIIIGGGSGGLAAAKEAAKFDKKVMVLDF-VTPTPLGTRWGLGGTCVNVGCIPKKL 69
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYE 141
+ A G L+D+R+YGW++ + + DW+K+ + + I LN Y+ L V
Sbjct: 70 MHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYEN 129
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEEL 200
GK +GP+++ T G + YSA+ LIATG R + IPG +E I+SD+ SL
Sbjct: 130 AYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYC 189
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P + +V+G Y+A+E A G+G V ++ R L LRGFD +M + ++E GI
Sbjct: 190 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFI 248
Query: 261 PRTTIKELIKSEEG------VKVITDHGEEIVAD---VVLFATGRAPNTKRLNLKAVGVE 311
+ ++ + E G V + + EE + D VL A GR T+ + L+ VGV+
Sbjct: 249 RQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVK 308
Query: 312 VDQ-TGAVKVDENSRTNVPSIWAVGDVTN-RMNLTPVALMEGTCFAKTVFGGQPCKPDYR 369
+++ TG + V + +TNVP I+A+GD+ ++ LTPVA+ G A+ ++GG K DY
Sbjct: 309 INEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYD 368
Query: 370 DVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGR-QEKTVMKLVVD 427
+VP VF GLSEE+A+E+ G+ +I V+ S F P+ T+ R K K++ +
Sbjct: 369 NVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKVICN 428
Query: 428 -AETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
+ E+V+G + GP A E+ QG A ALKCG TK Q DST+GIHP AE F T+ SVT+R
Sbjct: 429 LKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAEIFTTL-SVTKR 487
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/419 (37%), Positives = 233/419 (55%), Gaps = 10/419 (2%)
Query: 67 VGGTCVIRGCVPKKILVYGASFGGELE-DARSYGWEVHEKIDFDWKKLLQKKTDEILRLN 125
+GGTCV GCVPKK++ + A + YG++ F+W+ L+ +T I R++
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTIN-KFNWETLIASRTAYIDRIH 96
Query: 126 GIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQ 185
Y+ +L V + +G + V +EV +G ++ A HILIATG R IPG
Sbjct: 97 TSYENVLGKNNVDVIKGFARFVDAKTLEV---NGETIT--ADHILIATGGRPSHPDIPGV 151
Query: 186 ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMR 245
E I SD +L LP+R V+G GYIAVE A + G+G+ L RK PLR FD +
Sbjct: 152 EYGIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMIS 211
Query: 246 AVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLN 304
+ + G LH K ++K+ +G + + + G D +++A GR P +N
Sbjct: 212 ETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNIN 271
Query: 305 LKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPC 364
L+A GV+ ++ G + VD+ TN+ I+AVGD T + LTPVA+ G ++ +F +P
Sbjct: 272 LEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPD 331
Query: 365 KP-DYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVM 422
+ DY ++P VF PP+ VGL+E QA EQ G + V+ SSF M ++ ++ M
Sbjct: 332 EHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRM 391
Query: 423 KLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
KLV EK++G G E++QG AVALK GATK FD+TV IHP++AEEFVTMR
Sbjct: 392 KLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR 450
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 267 bits (683), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 252/478 (52%), Gaps = 19/478 (3%)
Query: 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKIL 82
FDL VIG GSGG+ A+ +A G KV + + P G+GGTCV GC+PKK++
Sbjct: 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADY-VEPSPRGTKWGLGGTCVNVGCIPKKLM 64
Query: 83 VYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG 142
A GG + DA YGWEV + + +WK + + + + LN ++ L + VK +
Sbjct: 65 HQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI 124
Query: 143 EGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIP---GQELAITSDEALSLEE 199
+ V + V G SA+HI+IATG R R P E ITSD+ L+E
Sbjct: 125 KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRP-RYPTQVKGALEYGITSDDIFWLKE 183
Query: 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINL 259
P + +V+G Y+A+E A G+G ++ R +PLRGFD +M ++V ++E G
Sbjct: 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMR-SIPLRGFDQQMSSLVTEHMESHGTQF 242
Query: 260 HP---RTTIKELIKSEEGVKVITDH--GEEIVA--DVVLFATGRAPNTKRLNLKAVGVEV 312
+ IK+L ++ V DH G+E D VL+A GR P T+ LNL+ G+
Sbjct: 243 LKGCVPSHIKKLPTNQLQV-TWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGIST 301
Query: 313 D-QTGAVKVDENSRTNVPSIWAVGDVTN-RMNLTPVALMEGTCFAKTVFGGQPCKPDYRD 370
+ + + VD T+VP I+A+GDV R LTP A+ G A+ +FG DY +
Sbjct: 302 NPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSN 361
Query: 371 VPCAVFCIPPLSVVGLSEEQAIE-QGKGDILVFTSSFNPMRNTISGRQ-EKTVMKLVVDA 428
VP VF VGLSEE+A+ G+ + V+ + + P+ T++ R + +K+V
Sbjct: 362 VPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMR 421
Query: 429 ETEK-VLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTR 485
E + VLG GP A E+ QG A+ +KCGA+ AQ TVGIHP+ +EE V + R
Sbjct: 422 EPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKR 479
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 252/478 (52%), Gaps = 19/478 (3%)
Query: 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKIL 82
FDL VIG GSGG+ A+ +A G KV + + P G+GGTCV GC+PKK++
Sbjct: 32 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADY-VEPSPRGTKWGLGGTCVNVGCIPKKLM 90
Query: 83 VYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG 142
A GG + DA YGWEV + + +WK + + + + LN ++ L + VK +
Sbjct: 91 HQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI 150
Query: 143 EGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIP---GQELAITSDEALSLEE 199
+ V + V G SA+HI+IATG R R P E ITSD+ L+E
Sbjct: 151 KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRP-RYPTQVKGALEYGITSDDIFWLKE 209
Query: 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINL 259
P + +V+G Y+A+E A G+G ++ R +PLRGFD +M ++V ++E G
Sbjct: 210 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMR-SIPLRGFDQQMSSLVTEHMESHGTQF 268
Query: 260 HP---RTTIKELIKSEEGVKVITDH--GEEIVA--DVVLFATGRAPNTKRLNLKAVGVEV 312
+ IK+L ++ V DH G+E D VL+A GR P T+ LNL+ G+
Sbjct: 269 LKGCVPSHIKKLPTNQLQV-TWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGIST 327
Query: 313 D-QTGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRD 370
+ + + VD T+VP I+A+GDV R LTP A+ G A+ +FG DY +
Sbjct: 328 NPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSN 387
Query: 371 VPCAVFCIPPLSVVGLSEEQAIE-QGKGDILVFTSSFNPMRNTISGRQ-EKTVMKLVVDA 428
VP VF VGLSEE+A+ G+ + V+ + + P+ T++ R + +K+V
Sbjct: 388 VPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMR 447
Query: 429 ETEK-VLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTR 485
E + VLG GP A E+ QG A+ +KCGA+ AQ TVGIHP+ +EE V + R
Sbjct: 448 EPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKR 505
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 265/487 (54%), Gaps = 22/487 (4%)
Query: 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVP 78
++ +D+DL VIG GSGG+ A + +A +GAK + + P G+GGTCV GC+P
Sbjct: 103 ESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY-VEPTPIGTTWGLGGTCVNVGCIP 161
Query: 79 KKILVYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGV 137
KK++ LEDA +GW + KI +W +++ I LN YK L + V
Sbjct: 162 KKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQV 221
Query: 138 KLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQ-ELAITSDEALS 196
+G+++ P+EV++T + + + I++ATG R + IPG E ITSD+ S
Sbjct: 222 TYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFS 281
Query: 197 LEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRG 256
L P + +V+G Y+A+E A +G V ++ R L LRGFD +M V +E G
Sbjct: 282 LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSIL-LRGFDQQMAEKVGDYMENHG 340
Query: 257 INLHPRTT---IKEL--IKSEE---GVKVITDHGE-----EIVADVVLFATGRAPNTKRL 303
+ IK+L + +E G+ ++ H E + V+FA GR P ++
Sbjct: 341 VKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKV 400
Query: 304 NLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQ 362
+ VGV++D+ G V ++ +T V +++A+GD+ + LTPVA+ G A+ +F G
Sbjct: 401 LCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGA 460
Query: 363 PCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTV 421
DY +V VF GLSEE AIE+ G DI V+ S+F P+ T++ R++
Sbjct: 461 TELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVC 520
Query: 422 -MKLVV-DAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVT 479
MKLV ++ +VLG + GP A EI QG AVA+K GATKA FD T+GIHP+ +E F T
Sbjct: 521 YMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTT 580
Query: 480 MRSVTRR 486
+ VT++
Sbjct: 581 LH-VTKK 586
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 265/487 (54%), Gaps = 22/487 (4%)
Query: 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVP 78
++ +D+DL VIG GSGG+ A + +A +GAK + + P G+GGTCV GC+P
Sbjct: 103 ESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY-VEPTPIGTTWGLGGTCVNVGCIP 161
Query: 79 KKILVYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGV 137
KK++ LEDA +GW + KI +W +++ I LN YK L + V
Sbjct: 162 KKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQV 221
Query: 138 KLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQ-ELAITSDEALS 196
+G+++ P+EV++T + + + I++ATG R + IPG E ITSD+ S
Sbjct: 222 TYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFS 281
Query: 197 LEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRG 256
L P + +V+G Y+A+E A +G V ++ R L LRGFD +M V +E G
Sbjct: 282 LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSIL-LRGFDQQMAEKVGDYMENHG 340
Query: 257 INLHPRTT---IKEL--IKSEE---GVKVITDHGE-----EIVADVVLFATGRAPNTKRL 303
+ IK+L + +E G+ ++ H E + V+FA GR P ++
Sbjct: 341 VKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKV 400
Query: 304 NLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQ 362
+ VGV++D+ G V ++ +T V +++A+GD+ + LTPVA+ G A+ +F G
Sbjct: 401 LCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGA 460
Query: 363 PCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTV 421
DY +V VF GLSEE AIE+ G DI V+ S+F P+ T++ R++
Sbjct: 461 TELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVC 520
Query: 422 -MKLVV-DAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVT 479
MKLV ++ +VLG + GP A EI QG AVA+K GATKA FD T+GIHP+ +E F T
Sbjct: 521 YMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTT 580
Query: 480 MRSVTRR 486
+ VT++
Sbjct: 581 LH-VTKK 586
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 264 bits (675), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 265/487 (54%), Gaps = 22/487 (4%)
Query: 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVP 78
++ +D+DL VIG GSGG+ A + +A +GAK + + P G+GGTCV GC+P
Sbjct: 103 ESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY-VEPTPIGTTWGLGGTCVNVGCIP 161
Query: 79 KKILVYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGV 137
KK++ LEDA +GW + KI +W +++ I LN YK L + V
Sbjct: 162 KKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQV 221
Query: 138 KLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQ-ELAITSDEALS 196
+G+++ P+EV++T + + + I++ATG R + IPG E ITSD+ S
Sbjct: 222 TYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFS 281
Query: 197 LEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRG 256
L P + +V+G Y+A+E A +G V ++ R L LRGFD +M V +E G
Sbjct: 282 LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSIL-LRGFDQQMAEKVGDYMENHG 340
Query: 257 INLHPRTT---IKEL--IKSEE---GVKVITDHGE-----EIVADVVLFATGRAPNTKRL 303
+ IK+L + +E G+ ++ H E + V+FA GR P ++
Sbjct: 341 VKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKV 400
Query: 304 NLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQ 362
+ VGV++D+ G V ++ +T V +++A+GD+ + LTPVA+ G A+ +F G
Sbjct: 401 LCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGA 460
Query: 363 PCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTV 421
DY +V VF GLSEE AIE+ G DI V+ S+F P+ T++ R++
Sbjct: 461 TELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVC 520
Query: 422 -MKLVV-DAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVT 479
MKLV ++ +VLG + GP A EI QG AVA+K GATKA FD T+GIHP+ +E F T
Sbjct: 521 YMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTT 580
Query: 480 MRSVTRR 486
+ VT++
Sbjct: 581 LH-VTKK 586
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 229/419 (54%), Gaps = 10/419 (2%)
Query: 67 VGGTCVIRGCVPKKILVYGASFGGELE-DARSYGWEVHEKIDFDWKKLLQKKTDEILRLN 125
+GGTCV GCVPKK++ + A + YG++ F+W+ L+ +T I R++
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTIN-KFNWETLIASRTAYIDRIH 96
Query: 126 GIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQ 185
Y+ +L V + +G + V +EV +G ++ A HILIATG R IPG
Sbjct: 97 TSYENVLGKNNVDVIKGFARFVDAKTLEV---NGETIT--ADHILIATGGRPSHPDIPGV 151
Query: 186 ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMR 245
E I SD +L LP+R V+G GYI VE + G+G+ L + PL FD +
Sbjct: 152 EYGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMIS 211
Query: 246 AVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLN 304
+ + G LH K ++K+ +G + + + G D +++A GR P +N
Sbjct: 212 ETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNIN 271
Query: 305 LKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPC 364
L+A GV+ ++ G + VD+ TN+ I+AVGD T + LTPVA+ G ++ +F +P
Sbjct: 272 LEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPD 331
Query: 365 KP-DYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEKTVM 422
+ DY ++P VF PP+ VGL+E QA EQ G + V+ SSF M ++ ++ M
Sbjct: 332 EHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRM 391
Query: 423 KLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
KLV EK++G G E++QG AVALK GATK FD+TV IHP++AEEFVTMR
Sbjct: 392 KLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR 450
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 258/479 (53%), Gaps = 15/479 (3%)
Query: 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVP 78
Q +D+DL VIG GS G+ A+ + GA+V + + GVGGTCV GC+P
Sbjct: 1 QGSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIP 60
Query: 79 KKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVK 138
KK++ + G + +A +YGW V +KI DW KL+Q + I +N + + L + V+
Sbjct: 61 KKLMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE 120
Query: 139 LYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQ-ELAITSDEALSL 197
G G V + + + +L + + +A+ +IA G R + IPG E ITSD+ SL
Sbjct: 121 YINGLGSFVDSHTL-LAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSL 179
Query: 198 EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGI 257
+ P + +V+G GYI +E A +G+G ++ R + LRGFD +M +VA ++E RGI
Sbjct: 180 DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGI 238
Query: 258 NLHPRTTIKELIKSEEGVKVI------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVE 311
+T + K ++G ++ T E V D VL+A GR LNL GV
Sbjct: 239 PFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVT 298
Query: 312 VDQTGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRD 370
V Q + VD TNV +I+AVGD+ + LTPVA++ G A+ ++GG + DY+D
Sbjct: 299 V-QKDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKD 357
Query: 371 VPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEK-TVMKLVVDA 428
V VF + VGLSEE A++Q G +I VF + P I + + +K V +
Sbjct: 358 VATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAER 417
Query: 429 E-TEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
++V G GP A E++QG A ALK G T +TVGIHP++AEEF T ++T+R
Sbjct: 418 HGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEF-TRLAITKR 475
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 258/479 (53%), Gaps = 15/479 (3%)
Query: 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVP 78
Q +D+DL VIG GS G+ A+ + GA+V + + GVGGTCV GC+P
Sbjct: 5 QGSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIP 64
Query: 79 KKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVK 138
KK++ + G + +A +YGW V +KI DW KL+Q + I +N + + L + V+
Sbjct: 65 KKLMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE 124
Query: 139 LYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQ-ELAITSDEALSL 197
G G V + + + +L + + +A+ +IA G R + IPG E ITSD+ SL
Sbjct: 125 YINGLGSFVDSHTL-LAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSL 183
Query: 198 EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGI 257
+ P + +V+G GYI +E A +G+G ++ R + LRGFD +M +VA ++E RGI
Sbjct: 184 DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGI 242
Query: 258 NLHPRTTIKELIKSEEGVKVI------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVE 311
+T + K ++G ++ T E V D VL+A GR LNL GV
Sbjct: 243 PFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVT 302
Query: 312 VDQTGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRD 370
V Q + VD TNV +I+AVGD+ + LTPVA++ G A+ ++GG + DY+D
Sbjct: 303 V-QKDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKD 361
Query: 371 VPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEK-TVMKLVVDA 428
V VF + VGLSEE A++Q G +I VF + P I + + +K V +
Sbjct: 362 VATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAER 421
Query: 429 E-TEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
++V G GP A E++QG A ALK G T +TVGIHP++AEEF T ++T+R
Sbjct: 422 HGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEF-TRLAITKR 479
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 258/479 (53%), Gaps = 15/479 (3%)
Query: 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVP 78
Q +D+DL VIG GS G+ A+ + GA+V + + GVGGTCV GC+P
Sbjct: 5 QGSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIP 64
Query: 79 KKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVK 138
KK++ + G + +A +YGW V +KI DW KL+Q + I +N + + L + V+
Sbjct: 65 KKLMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE 124
Query: 139 LYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQ-ELAITSDEALSL 197
G G V + + + +L + + +A+ +IA G R + IPG E ITSD+ SL
Sbjct: 125 YINGLGSFVDSHTL-LAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSL 183
Query: 198 EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGI 257
+ P + +V+G GYI +E A +G+G ++ R + LRGFD +M +VA ++E RGI
Sbjct: 184 DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGI 242
Query: 258 NLHPRTTIKELIKSEEGVKVI------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVE 311
+T + K ++G ++ T E V D VL+A GR LNL GV
Sbjct: 243 PFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVT 302
Query: 312 VDQTGAVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRD 370
V Q + VD TNV +I+AVGD+ + LTPVA++ G A+ ++GG + DY+D
Sbjct: 303 V-QKDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKD 361
Query: 371 VPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGRQEK-TVMKLVVDA 428
V VF + VGLSEE A++Q G +I VF + P I + + +K V +
Sbjct: 362 VATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAER 421
Query: 429 E-TEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRR 486
++V G GP A E++QG A ALK G T +TVGIHP++AEEF T ++T+R
Sbjct: 422 HGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEF-TRLAITKR 479
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 260/500 (52%), Gaps = 38/500 (7%)
Query: 10 ELSQPNQEEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGG 69
EL++ EE T +D+D VIG G GG+ +A+ +A GA+V + + P S G+GG
Sbjct: 30 ELTKNKVEEHT-YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDY-VKPSSQGTKWGIGG 87
Query: 70 TCVIRGCVPKKILVYGASFGGELE-DARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIY 128
TCV GCVPKK++ Y G + D+++YGW+ + + DWKKL+ I LN Y
Sbjct: 88 TCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF-DNLKHDWKKLVTTVQSHIRSLNFSY 146
Query: 129 KRLLSNAGVKLYEGEGKIVGPNEVEVTQLDG---TKLSYSAKHILIATGSRAQRAPIP-- 183
L ++ VK G K+ N V L G + + + K+ILIATG R IP
Sbjct: 147 MTGLRSSKVKYINGLAKLKDKNTVSY-YLKGDLSKEETVTGKYILIATGCRPH---IPDD 202
Query: 184 ---GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGF 240
+EL+ITSD+ SL++ P + +V+G Y+A+E + +G V + R + LRGF
Sbjct: 203 VEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGF 261
Query: 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKV-ITDHGEEIVADVVLFATGRAPN 299
D + V +E +G+ K+L K ++ + V +D E+ D VL+A GR +
Sbjct: 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELY-DTVLYAIGRKGD 320
Query: 300 TKRLNLKAVGVEVDQTG-AVKVDENSRTNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKT 357
LNL+++ + V+++ + D S TN+PSI+AVGDV N L PVA+ G A+
Sbjct: 321 IDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARR 380
Query: 358 VFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIE-QGKGDILVFTSSFNPMRNTISGR 416
+F DY +P +++ G SEE+A E GK ++ VF FN + + R
Sbjct: 381 LFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHR 440
Query: 417 QEK---------------TVMKLV-VDAETEKVLGASMCGPEAPEIMQGIAVALKCGATK 460
Q+ + KLV + E +V+G GP A E+ QG+A+AL+ K
Sbjct: 441 QKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKK 500
Query: 461 AQFDSTVGIHPSSAEEFVTM 480
FD+ +GIHP+ AE F+ +
Sbjct: 501 KDFDNCIGIHPTDAESFMNL 520
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 267/513 (52%), Gaps = 74/513 (14%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+DL VIG GSGG+ AAR +A AKV + E +GGTCV GCVPKKI+
Sbjct: 3 YDLIVIGGGSGGMAAARRAARHNAKVALVEK----------SRLGGTCVNVGCVPKKIMF 52
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
AS LE++R YG++ K F+ L++++ I RLN IY++ LS V LYEG
Sbjct: 53 NAASVHDILENSRHYGFDT--KFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT 110
Query: 144 GKIVGPNEVEV--TQLDGTKLS-------YSAKHILIATGSRAQRAPIPGQELAITSDEA 194
+ N + + T+ + K + ++ILIA G++ P+ G E I+SDE
Sbjct: 111 ASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGIENTISSDEF 170
Query: 195 LSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEG 254
+++E K+ ++G GYIAVE ++ + +G + R LR FD+ + V+ +++
Sbjct: 171 FNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKK 229
Query: 255 RGINLHPRTTIKELIK-SEEGVKV------ITDHGEEIVADVVLFATGRAPNTKRLNLKA 307
IN+ + E+ K S++ + + I +H D V++ GR+P+T+ L L+
Sbjct: 230 NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEH-----FDHVIYCVGRSPDTENLKLEK 284
Query: 308 VGVEVDQTGAVKVDENSRTNVPSIWAVGD------------------------------- 336
+ VE + V VDEN RT+V +I+AVGD
Sbjct: 285 LNVETNNNYIV-VDENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENV 343
Query: 337 ---VTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIE 393
+ + LTPVA+ G A +F + K +Y+ +P +F PP+ +GLSEE AI+
Sbjct: 344 TEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIFSHPPIGTIGLSEEAAIQ 403
Query: 394 -QGKGDILVFTSSFNPMRNTISG----RQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQ 448
GK ++ ++ S F + ++ +EKT +KLV + E + G + G A EI+Q
Sbjct: 404 IYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQ 463
Query: 449 GIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481
G AVALK ATK FD T+ IHP++AEEF+T++
Sbjct: 464 GFAVALKMNATKKDFDETIPIHPTAAEEFLTLQ 496
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 228/458 (49%), Gaps = 18/458 (3%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
+ + V+GAG GG AA +A G KV I E G +GG C+ GC+P K
Sbjct: 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEK----------GNLGGVCLNVGCIPSKA 51
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYE 141
L+ + + + + G + E + D+ K+ + K + +L G + LL V++ +
Sbjct: 52 LISASHRYEQAKHSEEMGIKA-ENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVK 110
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEEL 200
GE V N V V D + +Y+ K+ +IATGSR P + S AL+L E+
Sbjct: 111 GEAYFVDANTVRVVNGDSAQ-TYTFKNAIIATGSRPIELPNFKFSNRILDSTGALNLGEV 169
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
PK VV+GGGYI +E + + G+ V +L L GF+ +M A++ + L+ +G+ +
Sbjct: 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVV 229
Query: 261 PRTTIKELIKSEEGVKVITDHGEE---IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGA 317
K + E+GV V + E I AD VL GR PNT L L+ +G+++ G
Sbjct: 230 TNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGL 289
Query: 318 VKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFC 377
++VD+ RT+VP+I+A+GD+ L A EG A+ + G P DY +P VF
Sbjct: 290 IEVDQQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAI-AGHPSAVDYVAIPAVVFS 348
Query: 378 IPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGAS 437
P + VG E+QA ++G D++ F ++ +KLVV E ++GA
Sbjct: 349 DPECASVGYFEQQAKDEGI-DVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQ 407
Query: 438 MCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAE 475
+ GP A +++ + +A++ G T T+ HP+ E
Sbjct: 408 IIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGE 445
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 225/442 (50%), Gaps = 17/442 (3%)
Query: 45 FGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDA-RSYGWEVH 103
+ A + +L F E G +GGTC+ GC+P K L++ + E + + ++G +V
Sbjct: 19 YVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKV- 77
Query: 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLS 163
++ D ++ +K + L + L V +G GK V P+E+ V ++G
Sbjct: 78 SNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTV 137
Query: 164 YSAKHILIATGSRAQRAP--IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWR 221
KHI+IATGS + P ++ ++S AL+L E+PK+ VV+G GYI +E S+W
Sbjct: 138 VKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWG 197
Query: 222 GMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITD 280
+GS V ++ F E+ + D E+R R+LE +G+ +T + + S +GVK+ +
Sbjct: 198 RIGSEVTVVEFASEI-VPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVE 256
Query: 281 ---HGEEIV--ADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVG 335
GE+ + ADVVL + GR P T LNL +GVE D+ G + V+E TNV ++A+G
Sbjct: 257 PSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIG 316
Query: 336 DVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 395
DV L A +G + G+ DY VP V+ P ++ VG +EEQ E G
Sbjct: 317 DVIPGPMLAHKAEEDGVACVE-YLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETG 375
Query: 396 KGDILVFTSSFNPMRNTISGRQEKT--VMKLVVDAETEKVLGASMCGPEAPEIMQGIAVA 453
+ F M N+ + + ++K++ + ET+K+LG + P A E++ A+A
Sbjct: 376 ---VEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIA 432
Query: 454 LKCGATKAQFDSTVGIHPSSAE 475
L+ A+ HP+ +E
Sbjct: 433 LQYDASSEDIARVCHAHPTMSE 454
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 230/471 (48%), Gaps = 31/471 (6%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
D D+ VIG+G GG AA +A G F + E +GGTC+ GC+P K
Sbjct: 26 IDADVTVIGSGPGGYVAAIKAAQLG---------FKTVCIEKNETLGGTCLNVGCIPSKA 76
Query: 82 LVYGASFG--GELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKL 139
L+ + + +D S G E+ E + + K++++K+ + L G L V
Sbjct: 77 LLNNSHYYHMAHGKDFASRGIEMSE-VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVH 135
Query: 140 YEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEAL 195
G GKI G N+V T+ DG K+ILIATGS P PG ++ ++S AL
Sbjct: 136 VNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEV--TPFPGITIDEDTIVSSTGAL 193
Query: 196 SLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEG 254
SL+++P++ VV+G G I VE S+W+ +G+ V + F + G D E+ R L+
Sbjct: 194 SLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQK 253
Query: 255 RGINLHPRTTIKELIKSEEG---VKVITDHG---EEIVADVVLFATGRAPNTKRLNLKAV 308
+G T + K +G V + G E I DV+L GR P TK L L+ +
Sbjct: 254 QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEEL 313
Query: 309 GVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDY 368
G+E+D G + V+ +T +P+I+A+GDV L A EG + + GG DY
Sbjct: 314 GIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG-AVHIDY 372
Query: 369 RDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT--VMKLVV 426
VP ++ P ++ VG SEEQ E+G I F N+ + T ++K++
Sbjct: 373 NCVPSVIYTHPEVAWVGKSEEQLKEEG---IEYKVGKFPFAANSRAKTNADTDGMVKILG 429
Query: 427 DAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEF 477
T++VLGA + GP A E++ A+AL+ GA+ HP+ +E F
Sbjct: 430 QKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 480
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 231/471 (49%), Gaps = 31/471 (6%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
D D+ VIG+G GG AA +A G F + E +GGTC+ GC+P K
Sbjct: 5 IDADVTVIGSGPGGYVAAIKAAQLG---------FKTVCIEKNETLGGTCLNVGCIPSKA 55
Query: 82 LVYGASFG--GELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKL 139
L+ + + +D S G E+ E + + K++++K+ + L G L V
Sbjct: 56 LLNNSHYYHMAHGKDFASRGIEMSE-VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVH 114
Query: 140 YEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEAL 195
G GKI G N+V T+ DG K+ILIATGS + P PG ++ ++S AL
Sbjct: 115 VNGYGKITGKNQVTATKADGGTQVIDTKNILIATGS--EVTPFPGITIDEDTIVSSTGAL 172
Query: 196 SLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEG 254
SL+++P++ VV+G G I VE S+W+ +G+ V + F + G D E+ R L+
Sbjct: 173 SLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQK 232
Query: 255 RGINLHPRTTIKELIKSEEG---VKVITDHG---EEIVADVVLFATGRAPNTKRLNLKAV 308
+G T + K +G V + G E I DV+L GR P TK L L+ +
Sbjct: 233 QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEEL 292
Query: 309 GVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDY 368
G+E+D G + V+ +T +P+I+A+GDV L A EG + + GG DY
Sbjct: 293 GIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG-AVHIDY 351
Query: 369 RDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT--VMKLVV 426
VP ++ P ++ VG SEEQ E+G I F N+ + T ++K++
Sbjct: 352 NCVPSVIYTHPEVAWVGKSEEQLKEEG---IEYKVGKFPFAANSRAKTNADTDGMVKILG 408
Query: 427 DAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEF 477
T++VLGA + GP A E++ A+AL+ GA+ HP+ +E F
Sbjct: 409 QKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 459
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 229/471 (48%), Gaps = 31/471 (6%)
Query: 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
D D+ VIG+G GG AA +A G F + E +GGTC+ GC+P K
Sbjct: 5 IDADVTVIGSGPGGYVAAIKAAQLG---------FKTVCIEKNETLGGTCLNVGCIPSKA 55
Query: 82 LVYGASFG--GELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKL 139
L+ + + D S G E+ E + + K++++K+ + L G L V
Sbjct: 56 LLNNSHYYHMAHGTDFASRGIEMSE-VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVH 114
Query: 140 YEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEAL 195
G GKI G N+V T+ DG K+ILIATGS P PG ++ ++S AL
Sbjct: 115 VNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEV--TPFPGITIDEDTIVSSTGAL 172
Query: 196 SLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEG 254
SL+++P++ VV+G G I VE S+W+ +G+ V + F + G D E+ R L+
Sbjct: 173 SLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQK 232
Query: 255 RGINLHPRTTIKELIKSEEG---VKVITDHG---EEIVADVVLFATGRAPNTKRLNLKAV 308
+G T + K +G V + G E I DV+L GR P TK L L+ +
Sbjct: 233 QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEEL 292
Query: 309 GVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDY 368
G+E+D G + V+ +T +P+I+A+GDV L A EG + + GG DY
Sbjct: 293 GIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG-AVHIDY 351
Query: 369 RDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT--VMKLVV 426
VP ++ P ++ VG SEEQ E+G I F N+ + T ++K++
Sbjct: 352 NCVPSVIYTHPEVAWVGKSEEQLKEEG---IEYKVGKFPFAANSRAKTNADTDGMVKILG 408
Query: 427 DAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEF 477
T++VLGA + GP A E++ A+AL+ GA+ HP+ +E F
Sbjct: 409 QKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 459
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 233/460 (50%), Gaps = 12/460 (2%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
FD+ VIGAG GG AA +A G K E I E +GGTC+ GC+P K L+
Sbjct: 4 FDVVVIGAGPGGYVAAIRAAQLGLKTACIE---KYIGKEGKVALGGTCLNVGCIPSKALL 60
Query: 84 YGASFGGELEDA-RSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG 142
+ E ++A + +G E + + D ++ +K + + L G L GV +EG
Sbjct: 61 DSSYKYHEAKEAFKVHGIEA-KGVTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG 119
Query: 143 EGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR-AQRAPIP-GQELAITSDEALSLEEL 200
GK++ +VEVT LDG A++++IA+GSR + P P ++ + S AL + +
Sbjct: 120 HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLSDDIIVDSTGALEFQAV 179
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN-- 258
PK+ V+G G I +E S+W +G+ V +L + L D+++ + L +G+N
Sbjct: 180 PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR 239
Query: 259 LHPRTTIKELIKSEEGVKVITDHGEEI-VADVVLFATGRAPNTKRLNLKAVGVEVDQTGA 317
L R T E+ K + V +GE+ D ++ A GR P T L GV +D+ G
Sbjct: 240 LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF 299
Query: 318 VKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFC 377
+ VD++ +T+VP ++A+GDV L A EG A+ + G + +Y +P ++
Sbjct: 300 IYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERI-AGHKAQMNYDLIPSVIYT 358
Query: 378 IPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGAS 437
P ++ VG +E+ +G ++ V T F ++ ++K++ DA+T++VLG
Sbjct: 359 HPEIAWVGKTEQTLKAEGV-EVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVH 417
Query: 438 MCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEF 477
+ GP A E++Q A+ ++ G + V HP+ +E
Sbjct: 418 VIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEAL 457
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 238/464 (51%), Gaps = 31/464 (6%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+DL VIG G GG AA +A G KV E G VGG C+ GC+P K L+
Sbjct: 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVE----------AGEVGGVCLNVGCIPTKALL 56
Query: 84 YGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
+ A L+ A +G + K + D KKL + + +L G LL GV+L G
Sbjct: 57 HAAETLHHLKVAEGFGLKA--KPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGF 114
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRA-QRAPIPGQELAITSDEALSLEE-LP 201
++VGP EVEV G + Y AK +++ATGS + P E S AL +EE LP
Sbjct: 115 ARLVGPKEVEV---GGER--YGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLP 169
Query: 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINLH 260
KR +V+GGG + +E ++R +G+ V L+ + E+ +G D E A++ R LE GI +
Sbjct: 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQG-DPETAALLRRALEKEGIRVR 228
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFAT-----GRAPNTKRLNLKAVGVEVDQT 315
+T K ++G+ V + E + V+ GR P T+ L L+ GV+VD+
Sbjct: 229 TKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDER 288
Query: 316 GAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAV 375
G ++V+ T+VP ++A+GD L A+ EG A+ G+ DY+ VP V
Sbjct: 289 GFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENA-AGKDSAFDYQ-VPSVV 346
Query: 376 FCIPPLSVVGLSEEQAIEQG-KGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVL 434
+ P + VGL+EE+A G K + F + + T+ G + ++K+V D ET+ +L
Sbjct: 347 YTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAE--GMVKVVGDEETDLLL 404
Query: 435 GASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFV 478
G + GP+A E++ A+AL+ GAT TV HP+ +E +
Sbjct: 405 GVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLM 448
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 231/461 (50%), Gaps = 14/461 (3%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
FD+ VIGAG GG AA SA G K + E E +GGTC+ GC+P K L+
Sbjct: 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIE---KYKGKEGKTALGGTCLNVGCIPSKALL 60
Query: 84 YGA-SFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILR-LNGIYKRLLSNAGVKLYE 141
+ F E + +G E + D ++ +K D+I+R L G L+ GV L+E
Sbjct: 61 DSSYKFHEAHESFKLHGISTGE-VAIDVPTMIARK-DQIVRNLTGGVASLIKANGVTLFE 118
Query: 142 GEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR-AQRAPIP-GQELAITSDEALSLEE 199
G GK++ +VEVT DG+ +++++A+GS+ + P P Q++ + S AL +
Sbjct: 119 GHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQN 178
Query: 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN- 258
+P + V+G G I +E S+W +G+ V +L + L D+++ + L +G+
Sbjct: 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKI 238
Query: 259 -LHPRTTIKELIKSEEGVKVITDHGEEIVA-DVVLFATGRAPNTKRLNLKAVGVEVDQTG 316
L R T E+ + VK + GE+ A D ++ A GR P T L GV +D+ G
Sbjct: 239 LLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERG 298
Query: 317 AVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVF 376
+ VD+ T+VP ++A+GDV L A EG A+ + G + +Y +P ++
Sbjct: 299 FIYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERI-AGHKAQMNYDLIPAVIY 357
Query: 377 CIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGA 436
P ++ VG + EQA++ I V F ++ +K++ DA+T++VLG
Sbjct: 358 THPEIAGVGKT-EQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGV 416
Query: 437 SMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEF 477
+ GP A E++Q A+A++ G + V HP+ +E
Sbjct: 417 HVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEAL 457
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 226/468 (48%), Gaps = 46/468 (9%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKIL- 82
+DL VIGAG GG AA +A G KVG+ E +GGTC+ GC+P K L
Sbjct: 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKE---------KALGGTCLRVGCIPSKALL 52
Query: 83 -----VYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLN--GIYKRLLSNA 135
+Y A G L A+ G ++ D L+ K D++++ N G+ + L
Sbjct: 53 ETTERIYEAKKG--LLGAKVKG------VELDLPALMAHK-DKVVQANTQGV-EFLFKKN 102
Query: 136 GVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQ---ELAITSD 192
G+ ++G + + +V V + T A++ILIATGS A P Q E +TS
Sbjct: 103 GIARHQGTARFLSERKVLVEE---TGEELEARYILIATGS-APLIPPWAQVDYERVVTST 158
Query: 193 EALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNL 252
EALS E+PKR +V+GGG I +E +W +G+ V +L + L D E+ R
Sbjct: 159 EALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVF 218
Query: 253 EGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEV 312
+ +G+ + + ++ +G +V + GE + AD VL A GR P T+ L+L+ G+
Sbjct: 219 KKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLST 278
Query: 313 DQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVP 372
D+ G + VDE+ RT VP I+A+GDV L A EG + + G DY+ +P
Sbjct: 279 DERGRIPVDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGF-GHVDYQAIP 337
Query: 373 CAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGR-----QEKTVMKLVVD 427
V+ P ++ VG +EE+ QG + SGR + + +K++
Sbjct: 338 SVVYTHPEIAAVGYTEEELKAQG------IPYKVGKFPYSASGRARAMGETEGFIKVLAH 391
Query: 428 AETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAE 475
A+T+++LG G +++ A+AL A+ HPS +E
Sbjct: 392 AKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSE 439
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 234/484 (48%), Gaps = 38/484 (7%)
Query: 10 ELSQPNQEEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGG 69
+L N Q+ +DL VIG+G GG A +A G KV + E GG
Sbjct: 12 DLGTENLYFQSXXAYDLIVIGSGPGGYVCAIKAAQLGXKVAVVEKR---------STYGG 62
Query: 70 TCVIRGCVPKKILVYGA-SFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGI 127
TC+ GC+P K L++ + F + G EV + K++ K K ++G+
Sbjct: 63 TCLNVGCIPSKALLHASEXFHQAQHGLEALGVEVANPKLNLQ-KXXAHKDATVKSNVDGV 121
Query: 128 YKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQEL 187
L + ++G GK++G +V VT G + AK+++IATGS A IPG E+
Sbjct: 122 -SFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDV--AGIPGVEV 178
Query: 188 A------ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFD 241
A ++S AL+LE++P +V+GGG I +E S+W +G+ V ++ + L G D
Sbjct: 179 AFDEKTIVSSTGALALEKVPASXIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGXD 238
Query: 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITD-----HGEEIVADVVLFATGR 296
E+ + R L +GI+ + +KS +G KV + + A+VVL ATGR
Sbjct: 239 GEVAKQLQRXLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298
Query: 297 APNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAK 356
P+T L L GV +D G V++D + +T++ ++A+GDV L A EG A+
Sbjct: 299 KPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGPXLAHKAEDEGVAVAE 358
Query: 357 TVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGR 416
+ GQ +Y +P V+ P ++ VG +EE+ G + + P T +GR
Sbjct: 359 -IIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAG----VAYKIGKFPF--TANGR 411
Query: 417 -----QEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHP 471
Q +K++ D ET++VLG + G A E + IAV + G + T HP
Sbjct: 412 ARAXLQTDGFVKILADKETDRVLGGHIIGFGAGEXIHEIAVLXEFGGSSEDLGRTCHAHP 471
Query: 472 SSAE 475
+ +E
Sbjct: 472 TXSE 475
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 229/471 (48%), Gaps = 31/471 (6%)
Query: 25 DLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVY 84
D+ +IG G G AA +A G F+ E G +GGTC+ GC+P K L+
Sbjct: 7 DVVIIGGGPAGYVAAIKAAQLG---------FNTACVEKRGKLGGTCLNVGCIPSKALLN 57
Query: 85 GASFGGELE-DARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE 143
+ ++ +A+ G +V+ I + + K D + +L G + L V Y+G
Sbjct: 58 NSHLFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGN 117
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHIL------IATGSRAQRAPIPG----QELAITSDE 193
G ++ VT +DG + + HIL +ATGS P PG +E ++S
Sbjct: 118 GSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV--TPFPGIEIDEEKIVSSTG 175
Query: 194 ALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLE 253
ALSL+E+PKR ++GGG I +E S++ +GS V ++ + D E+ + L+
Sbjct: 176 ALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLK 235
Query: 254 GRGINLHPRTTIKELIKSEEG--VKVI-----TDHGEEIVADVVLFATGRAPNTKRLNLK 306
+G++ T + ++++ V+++ T+ E + A+V+L A GR P L +
Sbjct: 236 KQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAE 295
Query: 307 AVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKP 366
+G+EVD+ G + +D+ + P I VGDVT L A EG + + G
Sbjct: 296 KIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGH-GHV 354
Query: 367 DYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVV 426
+Y ++P ++ P ++ VG +EEQ E G D + F + + + +K+++
Sbjct: 355 NYNNIPSVMYSHPEVAWVGKTEEQLKEAGI-DYKIGKFPFAANSRAKTNQDTEGFVKILI 413
Query: 427 DAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEF 477
D++TE++LGA + GP A E++ +AL+ GA+ HP+ +E F
Sbjct: 414 DSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAF 464
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 205/435 (47%), Gaps = 24/435 (5%)
Query: 28 VIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGAS 87
VIG+G + AA + GA+V + E G +GGTCV GCVP KI++ A
Sbjct: 9 VIGSGGAAMAAALKAVEQGAQVTLIER----------GTIGGTCVNVGCVPSKIMIRAAH 58
Query: 88 FGGELEDARSYGWEVHEKIDFDWKKLL---QKKTDEILRLNGIYKRLLS-NAGVKLYEGE 143
++ G D KLL Q + DE+ Y+ +L N + + GE
Sbjct: 59 IAHLRRESPFDGGIAATVPTIDRSKLLAQQQARVDELRHAK--YEGILGGNPAITVVHGE 116
Query: 144 GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELP 201
+ + V +G + L+ATG+ PIPG + TS EAL+ + +P
Sbjct: 117 ARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEALASDTIP 176
Query: 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHP 261
+R V+G +A+E A + +GS V +L R L R D + V GI +
Sbjct: 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFRE-DPAIGEAVTAAFRAEGIEVLE 235
Query: 262 RTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVD 321
T ++ + + T HGE + AD +L ATGR PNT+ L L A GV V+ GA+ +D
Sbjct: 236 HTQASQVAHMDGEFVLTTTHGE-LRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVID 294
Query: 322 ENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPL 381
+ RT+ P+I+A GD T++ VA GT A + GG D +P VF P +
Sbjct: 295 QGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAAL-DLTAMPAVVFTDPQV 353
Query: 382 SVVGLSEEQAIEQG-KGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCG 440
+ VG SE +A G + D T P ++ + +KLV++ + +++G
Sbjct: 354 ATVGYSEAEAHHDGIETDSRTLTLDNVP--RALANFDTRGFIKLVIEEGSHRLIGVQAVA 411
Query: 441 PEAPEIMQGIAVALK 455
PEA E++Q A+A++
Sbjct: 412 PEAGELIQTAALAIR 426
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 203/417 (48%), Gaps = 21/417 (5%)
Query: 67 VGGTCVIRGCVPKKILVYGA---SFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILR 123
+GGTC+ GC+P K L++ A + G V D + + K + R
Sbjct: 39 LGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASP-RLDIGQSVAWKDGIVDR 97
Query: 124 LNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-I 182
L LL GVK+ G K++ +VEV DG ++ +H+L+ATGS + P +
Sbjct: 98 LTTGVAALLKKHGVKVVHGWAKVLDGKQVEV---DGQRIQ--CEHLLLATGSSSVELPML 152
Query: 183 PGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDD 242
P I+S EAL+ + LP+ VV+GGGYI +E +R +G+ V ++ +E L +D
Sbjct: 153 PLGGPVISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDS 212
Query: 243 EMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGE----EIVADVVLFATGRAP 298
E+ A VA +L+ GI LH + ++ E ++ + G+ + AD VL A GR P
Sbjct: 213 ELTAPVAESLKKLGIALH----LGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRP 268
Query: 299 NTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTV 358
TK NL+ + ++++ A+ +DE +T++ ++WA+GDV L A+ +G A+ +
Sbjct: 269 RTKGFNLECLDLKMN-GAAIAIDERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAE-I 326
Query: 359 FGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQE 418
G+ + + + F P + VVG + EQA +QG D +V F +S +
Sbjct: 327 IAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGL-DCIVAQFPFAANGRAMSLESK 385
Query: 419 KTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAE 475
+++V + +LG G E+ A +L+ GA T+ HP+ E
Sbjct: 386 SGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGE 442
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 221/466 (47%), Gaps = 29/466 (6%)
Query: 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPK 79
TH+D + V+GAG GG AA +A G I E + GG C+ GC+P
Sbjct: 4 THYD--VVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW----------GGVCLNVGCIPS 51
Query: 80 KILVYGASFGGEL-EDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVK 138
K L+ A +DA+++G D+ +K E R+ G++ + N +
Sbjct: 52 KALLRNAELVHIFTKDAKAFGISGEVTFDYGIAYDRSRKVAE-GRVAGVHFLMKKNKITE 110
Query: 139 LYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELA---ITSDEAL 195
++ G G N + V DG S + + +IATGS + +PG L+ +T +E +
Sbjct: 111 IH-GYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRL--VPGTSLSANVVTYEEQI 167
Query: 196 SLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP--LRGFDDEMRAVVARNLE 253
ELPK ++ G G I +EF + + G VD+ + LP L D ++ + + +
Sbjct: 168 LSRELPKSIIIAGAGAIGMEFGYVLKNYG--VDVTIVEFLPRALPNEDADVSKEIEKQFK 225
Query: 254 GRGINLHPRTTIKELIKSEEGVKV-ITDHG--EEIVADVVLFATGRAPNTKRLNLKAVGV 310
G+ + T ++ + V V +T G +E+ A+ VL A G APN + L GV
Sbjct: 226 KLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGV 285
Query: 311 EVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCK-PDYR 369
+ A+ VD+ RTNV I+A+GDV + L VA +G A+T+ G + D+R
Sbjct: 286 ALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHR 345
Query: 370 DVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAE 429
+P A FC P ++ GL+E+QA +G D++V F +KLV DA+
Sbjct: 346 MLPRATFCQPNVASFGLTEQQARNEGY-DVVVAKFPFTANAKAHGVGDPSGFVKLVADAK 404
Query: 430 TEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAE 475
++LG + G + E++ + +A + T ++ V HP+ +E
Sbjct: 405 HGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSE 450
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 205/441 (46%), Gaps = 17/441 (3%)
Query: 47 AKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARS----YGWEV 102
A + +L E G +GGTC+ GC+P K L++ DA + YG
Sbjct: 17 ASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHL---YHDAHANFARYGLMG 73
Query: 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKL 162
E + D K+ Q+K + L G + L V Y+GEG + + V LDG +
Sbjct: 74 GEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQE 133
Query: 163 SYSAKHILIATGSRAQRAP-IPGQE-LAITSDEALSLEELPKRAVVLGGGYIAVEFASIW 220
K +IATGS P +P E + ++S AL+L +PK VV+GGG I +E S+W
Sbjct: 134 MLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVW 193
Query: 221 RGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT 279
+G+ V ++ F +D A+V + + T + + + V +
Sbjct: 194 ARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEV 253
Query: 280 D----HGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVG 335
+ E + + +L + GR P T L L + V ++ G VK+ ++ T++P ++A+G
Sbjct: 254 EGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIG 313
Query: 336 DVTNR-MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ 394
DV ++ L A EG A+ + G+P +Y +P ++ +P ++ VG SE++ ++
Sbjct: 314 DVVDKGPMLAHKAEDEGVACAE-ILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDELKKE 372
Query: 395 GKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVAL 454
G V FN + E +K++VD T+++LG + A E++ +A+
Sbjct: 373 GVA-YKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAM 431
Query: 455 KCGATKAQFDSTVGIHPSSAE 475
+ GA+ T HP+ +E
Sbjct: 432 EYGASSEDVGRTCHAHPTMSE 452
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 217/462 (46%), Gaps = 27/462 (5%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83
+D+ V+GAG GG AA +A G I E + GG C+ GC+P K L+
Sbjct: 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW----------GGVCLNVGCIPSKALL 53
Query: 84 YGASFGGEL-EDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG 142
A +DA+++G D+ +K E R+ G++ N +++ G
Sbjct: 54 RNAELVHIFTKDAKAFGISGEVTFDYGIAYDRSRKVAE-GRVAGVHFLXKKNKITEIH-G 111
Query: 143 EGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELA---ITSDEALSLEE 199
G N + V DG S + + +IATGS + +PG L+ +T +E + E
Sbjct: 112 YGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRL--VPGTSLSANVVTYEEQILSRE 169
Query: 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP--LRGFDDEMRAVVARNLEGRGI 257
LPK ++ G G I EF + + G VD+ + LP L D ++ + + + G+
Sbjct: 170 LPKSIIIAGAGAIGXEFGYVLKNYG--VDVTIVEFLPRALPNEDADVSKEIEKQFKKLGV 227
Query: 258 NLHPRTTIKELIKSEEGVKV-ITDHG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQ 314
+ T ++ + V V +T G +E+ A+ VL A G APN + L GV +
Sbjct: 228 TILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTD 287
Query: 315 TGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCK-PDYRDVPC 373
A+ VD+ RTNV I+A+GDV + L VA +G A+T+ G + D+R +P
Sbjct: 288 RKAIGVDDYXRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRXLPR 347
Query: 374 AVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKV 433
A FC P ++ GL+E+QA +G D++V F +KLV DA+ ++
Sbjct: 348 ATFCQPNVASFGLTEQQARNEGY-DVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGEL 406
Query: 434 LGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAE 475
LG + G + E++ + +A + T ++ V HP+ +E
Sbjct: 407 LGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTXSE 448
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 205/435 (47%), Gaps = 47/435 (10%)
Query: 65 GGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV----HEKIDFDWKKLLQKKTDE 120
G +GG C+ GCVP K + + W + + KI D+ + Q + D
Sbjct: 37 GELGGNCLYSGCVPSK----------TVREVIQTAWRLTNIANVKIPLDFSTV-QDRKDY 85
Query: 121 I--LRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ 178
+ LR + + + Y+G KI P V V +G ++ ++++IA+G+
Sbjct: 86 VQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA 145
Query: 179 RAPIPGQELAITSDEAL----SLEELPKRAVVLGGGYIAVEFASIWRGMG---STVDLLF 231
+ +PG E +TSD+ S +LP+ V++G GYI +E ASI+R MG +++L
Sbjct: 146 KLRLPGVEYCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD 205
Query: 232 RKELPLRGFD--DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHG--EEIVA 287
R + L D + + +++ N++ P T +K++ E V T G + I
Sbjct: 206 RALITLEDQDIVNTLLSILKLNIKFNS----PVTEVKKIKDDEYEVIYSTKDGSKKSIFT 261
Query: 288 DVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVA 347
+ V+ A GR P + +G+ + +TG V VDE +TN+P+++A GD A
Sbjct: 262 NSVVLAAGRRPVIPE-GAREIGLSISKTGIV-VDETMKTNIPNVFATGDANGLAPYYHAA 319
Query: 348 LMEGTCFAKTVFG-GQPCKPDYRDV---PCAVFCIPPLSVVGLSEEQAIEQGKGDILVFT 403
+ A + G P DY DV P ++ IP LS VG+ +A + G I +
Sbjct: 320 VRMSIAAANNIMANGMPV--DYVDVKSIPVTIYTIPSLSYVGILPSKARKMG---IEIVE 374
Query: 404 SSFNPMRNTISGR---QEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATK 460
+ +N M +S + Q++ V+KL+ + + +++GA M G + ++ + +A+ G
Sbjct: 375 AEYN-MEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNA 433
Query: 461 AQFDSTVGIHPSSAE 475
Q S HPS+ E
Sbjct: 434 KQLASFAEQHPSTNE 448
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 215/455 (47%), Gaps = 27/455 (5%)
Query: 38 AARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARS 97
AA +A+ G KV I E +GG C+ GC+P K L++ A+ E+ +
Sbjct: 21 AAFAAADEGLKVAIVER---------YKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAA 71
Query: 98 YGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQL 157
G + E + D L K + RL G + + V + +G+G+ + P+ +EV+
Sbjct: 72 NGIKYPEP-ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLT 130
Query: 158 DGTKLSYSA----------KHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVV 206
G +A K+ +IA GSR + P IP I S AL+L+E+P + ++
Sbjct: 131 AGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSSGALALKEVPGKLLI 190
Query: 207 LGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIK 266
+GGG I +E +++ +GS +D++ + ++G D ++ V + E R N+ T
Sbjct: 191 IGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTV 250
Query: 267 ELIKSEEGVKVITDHG----EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDE 322
+ E+GV V + E D VL A GRAPN K ++ + GV V G ++VD+
Sbjct: 251 AVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDK 310
Query: 323 NSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLS 382
RTNVP I+A+GD+ + L A+ EG A+ G D R +P + P ++
Sbjct: 311 QMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENC-AGHKAYFDARVIPGVAYTSPEVA 369
Query: 383 VVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPE 442
VG +E A + I + I+ +K KL+ DAET +++G + GP
Sbjct: 370 WVGETELSAKASAR-KITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPN 428
Query: 443 APEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEF 477
+++ + +A++ G A T+ HP+ E
Sbjct: 429 GGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESI 463
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 215/455 (47%), Gaps = 27/455 (5%)
Query: 38 AARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARS 97
AA +A+ G KV I E +GG C+ GC+P K L++ A+ E+ +
Sbjct: 21 AAFAAADEGLKVAIVER---------YKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAA 71
Query: 98 YGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQL 157
G + E + D L K + RL G + + V + +G+G+ + P+ +EV+
Sbjct: 72 NGIKYPEP-ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLT 130
Query: 158 DGTKLSYSA----------KHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVV 206
G +A K+ +IA GSR + P IP I S AL+L+E+P + ++
Sbjct: 131 AGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSSGALALKEVPGKLLI 190
Query: 207 LGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIK 266
+GGG I +E +++ +GS +D++ + ++G D ++ V + E R N+ T
Sbjct: 191 IGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTV 250
Query: 267 ELIKSEEGVKVITDHG----EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDE 322
+ E+GV V + E D VL A GRAPN K ++ + GV V G ++VD+
Sbjct: 251 AVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDK 310
Query: 323 NSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLS 382
RTNVP I+A+GD+ + L A+ EG A+ G D R +P + P ++
Sbjct: 311 QMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENC-AGHKAYFDARVIPGVAYTSPEVA 369
Query: 383 VVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPE 442
VG +E A + I + I+ +K KL+ DAET +++G + GP
Sbjct: 370 WVGETELSAKASAR-KITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPN 428
Query: 443 APEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEF 477
+++ + +A++ G A T+ HP+ E
Sbjct: 429 GGDMIGEVYLAIEMGCDAADIGKTIHPHPTLGESI 463
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 198/468 (42%), Gaps = 41/468 (8%)
Query: 26 LFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVI----GGVGGTCVIRGCVPKKI 81
+ ++G G G AA +A HP +++V G+GG V+ CVP K
Sbjct: 5 IVILGGGPAGYEAALVAATS-----------HPETTQVTVIDCDGIGGAAVLDDCVPSKT 53
Query: 82 LVYGASFGGELEDARSYGWEVHEKIDFDWKKL------LQKKTDEILRLNGIYKRLLSNA 135
+ EL A G+ IDFD K+ + KT + I +LLS
Sbjct: 54 FIASTGLRTELRRAPHLGFH----IDFDDAKISLPQIHARVKTLAAAQSADITAQLLS-M 108
Query: 136 GVKLYEGEGKIV------GPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI--PGQEL 187
GV++ G G+++ + ++ T DG+ + A +L+ATG+ + P P E
Sbjct: 109 GVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSAQPDGER 168
Query: 188 AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAV 247
+T + L+ LP +V+G G EF + +G V ++ ++ L D + V
Sbjct: 169 ILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALV 228
Query: 248 VARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKA 307
+ + RG+ L + ++ GV V G + L G PNT L L+
Sbjct: 229 LEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLER 288
Query: 308 VGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPD 367
VG+++ + + VD SRT I+A GD T + L VA M+G G
Sbjct: 289 VGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIR 348
Query: 368 YRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT---VMKL 424
R V VF P ++ VG+ + I+ G + + P+R + + +K+
Sbjct: 349 LRTVAATVFTRPEIAAVGV-PQSVIDAGS---VAARTIMLPLRTNARAKMSEMRHGFVKI 404
Query: 425 VVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPS 472
T V+G + P A E++ IAVA++ T + T+ ++PS
Sbjct: 405 FCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPS 452
>pdb|3IC9|A Chain A, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|B Chain B, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|C Chain C, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|D Chain D, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h
Length = 492
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 198/483 (40%), Gaps = 40/483 (8%)
Query: 25 DLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVY 84
D+ +IG G+ G A R + KV + E G G TC GC P K+L+
Sbjct: 10 DVAIIGTGTAGXGAYRAAKKHTDKVVLIEG----------GAYGTTCARVGCXPSKLLIA 59
Query: 85 GASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEG 144
A +G +V ++I + K + ++ E R G V+ ++ +
Sbjct: 60 AADASYHASQTDLFGIQV-DRISVNGKAVXKRIQTERDRFVGFVVE-----SVESFDEQD 113
Query: 145 KIVGPNEV---EVTQLDGTKLSYSAKHILIATGSRAQRAPI---PGQELAITSDEALSLE 198
KI G + Q+D AK I+IATGSR G L +T+D L
Sbjct: 114 KIRGFAKFLDEHTLQVDDHS-QVIAKRIVIATGSRPNYPEFLAAAGSRL-LTNDNLFELN 171
Query: 199 ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN 258
+LPK V G G I +E +G V +F + + DE A
Sbjct: 172 DLPKSVAVFGPGVIGLELGQALSRLGVIVK-VFGRSGSVANLQDEEXKRYAEKTFNEEFY 230
Query: 259 LHPRTTIKELIKSEEGVKVI--TDHGEEIVA--DVVLFATGRAPNTKRLNLKAVGVEVDQ 314
+ + I+ E+ V+VI G++ VL ATGR N +L L+ +E+D+
Sbjct: 231 FDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDK 290
Query: 315 TGAVKVDENS-RTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPC-KPDYRDVP 372
+ DE + +T+V I+ GD N + L A +G A T G P R P
Sbjct: 291 KNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKV-AGTNAGAYPVIAQGQRRAP 349
Query: 373 CA-VFCIPPLSVVGLS----EEQAIEQGKGDILVFTSSFNPM-RNTISGRQEKTVMKLVV 426
+ VF P ++ VGLS E+ +Q + +V SF R+ + G+ K ++ +
Sbjct: 350 LSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVXGKN-KGLLNVYA 408
Query: 427 DAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVT-MRSVTR 485
D + + LGA GP A I +A A + T + HP E T +R +
Sbjct: 409 DRTSGEFLGAEXFGPAAEHIGHLLAWARQQQXTVQAXLTXPFYHPVIEEGLRTALRDAQQ 468
Query: 486 RVA 488
++A
Sbjct: 469 KLA 471
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 204/486 (41%), Gaps = 71/486 (14%)
Query: 15 NQEEQTHFDFDLFVIGAGSGG-VRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVI 73
N +E ++D IG G+ G +A A G ++ + PF +GG+C
Sbjct: 35 NVDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF----------LGGSCPH 84
Query: 74 RGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRL--NGIYKRL 131
CVP + + EL AR++ + + D K + K+ ++ R NG + +
Sbjct: 85 NACVPHHLF---SDCAAELMLARTFSGQ-YWFPDMTEKVVGIKEVVDLFRAGRNGPHGIM 140
Query: 132 LSNAGVKL-----YEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQE 186
+ +L K++ + VE + AK++++A G+ +PG
Sbjct: 141 NFQSKEQLNLEYILNCPAKVIDNHTVE-----AAGKVFKAKNLILAVGAGPGTLDVPGVN 195
Query: 187 LAITSDEALSLEELPKR----AVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGF-D 241
D A +EEL VV+GG AVE+ + G +L R E PL+ D
Sbjct: 196 AKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLIKD 254
Query: 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEG----VKVITDHGE-EIVADVVLFATGR 296
+E RA V ++ +G+ + + + + + G V +T +GE I D V G
Sbjct: 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314
Query: 297 APNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGT---C 353
P + L K +G+++ G V V+E +T+VP+++AVGD+ P+ + + C
Sbjct: 315 QPRSAEL-AKILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIG----GPMEMFKARKSGC 369
Query: 354 FAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILV------------ 401
+A G+ ++ P + +S +G+ EE+A G + +
Sbjct: 370 YAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPPDTENGLNV 429
Query: 402 --------FTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVA 453
+F +SG Q K+V+DA+T KVLGA G A + Q + V
Sbjct: 430 ALPASDRTMLYAFGKGTAHMSGFQ-----KIVIDAKTRKVLGAHHVGYGAKDAFQYLNVL 484
Query: 454 LKCGAT 459
+K G T
Sbjct: 485 IKQGLT 490
>pdb|2BC1|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BC1|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BCP|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
pdb|2BCP|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
Length = 490
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 167/374 (44%), Gaps = 56/374 (14%)
Query: 129 KRLLSNAGVKLY-EGEGKIVGPNEVEVTQL-DGTKLSYSAKHILIATGSRAQRAPIPGQE 186
K L + G K+Y E + + + VT L DG + ++ ATGS+ PI G E
Sbjct: 99 KEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAE 158
Query: 187 LAITSDE-ALSLEELP--------------------KRAVVLGGGYIAVEFASIWRGMGS 225
+ S E +LE L KR V+G GYI VE A ++ G
Sbjct: 159 IKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGK 218
Query: 226 TVDLLFRKELPLRGF-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEE 284
V L+ + L G+ D ++ ++A+N+E GI L T+KE+ + + K+ITD E
Sbjct: 219 EVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIITDKNEY 278
Query: 285 IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDV------- 337
V D+V+ A G PNT N K +++ + GA V++ T++P ++A+GD
Sbjct: 279 DV-DMVILAVGFRPNTTLGNGK---IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNA 334
Query: 338 ---TNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPC------AVFCIPPLSVVGLSE 388
TN + L A+ G A C D + +++ + +S GL+
Sbjct: 335 TRDTNYIALASNAVRTGIVAAH-----NACGTDLEGIGVQGSNGISIYGLHMVS-TGLTL 388
Query: 389 EQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQ 448
E+A G D V + N I +K+V D ++ ++LGA M E ++
Sbjct: 389 EKAKRLGF-DAAVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAARE--DVSM 445
Query: 449 GI---AVALKCGAT 459
GI ++A++ G T
Sbjct: 446 GIHMFSLAIQEGVT 459
>pdb|2BC0|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
pdb|2BC0|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
Length = 490
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 167/374 (44%), Gaps = 56/374 (14%)
Query: 129 KRLLSNAGVKLY-EGEGKIVGPNEVEVTQL-DGTKLSYSAKHILIATGSRAQRAPIPGQE 186
K L + G K+Y E + + + VT L DG + ++ ATGS+ PI G E
Sbjct: 99 KEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAE 158
Query: 187 LAITSDE-ALSLEELP--------------------KRAVVLGGGYIAVEFASIWRGMGS 225
+ S E +LE L KR V+G GYI VE A ++ G
Sbjct: 159 IKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGK 218
Query: 226 TVDLLFRKELPLRGF-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEE 284
V L+ + L G+ D ++ ++A+N+E GI L T+KE+ + + K+ITD E
Sbjct: 219 EVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIITDKNEY 278
Query: 285 IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDV------- 337
V D+V+ A G PNT N K +++ + GA V++ T++P ++A+GD
Sbjct: 279 DV-DMVILAVGFRPNTTLGNGK---IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNA 334
Query: 338 ---TNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPC------AVFCIPPLSVVGLSE 388
TN + L A+ G A C D + +++ + +S GL+
Sbjct: 335 TRDTNYIALASNAVRTGIVAAH-----NACGTDLEGIGVQGSNGISIYGLHMVS-TGLTL 388
Query: 389 EQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQ 448
E+A G D V + N I +K+V D ++ ++LGA M E ++
Sbjct: 389 EKAKRLGF-DAAVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAARE--DVSM 445
Query: 449 GI---AVALKCGAT 459
GI ++A++ G T
Sbjct: 446 GIHMFSLAIQEGVT 459
>pdb|3IWA|A Chain A, Crystal Structure Of A Fad-Dependent Pyridine
Nucleotide-Disulphide Oxidoreductase From Desulfovibrio
Vulgaris
Length = 472
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 151/317 (47%), Gaps = 43/317 (13%)
Query: 150 NEVEVTQL-DGTKLSYSAKHILIATGSRAQRAPIPGQELA----ITS-DEA------LSL 197
+ VE+ L G + + +++A GS+A R P+ G +LA +T+ DEA +S
Sbjct: 97 HTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA 156
Query: 198 EELPKRAVVLGGGYI----AVEFASIWRGMGSTVDLLFRKELPLRGFDDE-MRAVVARNL 252
E+ K AV++GGG+I AV A +W G+ +TV L + +P GF + + ++ +L
Sbjct: 157 GEVSK-AVIVGGGFIGLEMAVSLADMW-GIDTTVVELADQIMP--GFTSKSLSQMLRHDL 212
Query: 253 EGRGINLHPRTTIKELIKSEEG--VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGV 310
E + +H + L + E G +VITD + AD+V+ A G +PNT+ + G+
Sbjct: 213 EKNDVVVHTGEKVVRL-EGENGKVARVITDK-RTLDADLVILAAGVSPNTQLA--RDAGL 268
Query: 311 EVDQTGAVKVDENSRTNVPSIWAVGD-------VTNRMNLTPVALM---EGTCFAKTVFG 360
E+D GA+ VD RT+ P I+A GD VT + P+ M +G +
Sbjct: 269 ELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328
Query: 361 GQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT 420
G P S GL+ E A+ +G + V F+ EKT
Sbjct: 329 GDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQFDRAHF----YPEKT 384
Query: 421 VM--KLVVDAETEKVLG 435
+M +LVVD T +VLG
Sbjct: 385 IMTLQLVVDRPTRRVLG 401
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 28/339 (8%)
Query: 158 DGTKLSYSAKHILIATGSRAQRAPIPGQEL--AITSD---EALSLEELPKR-----AVVL 207
+G + SY +++ A G+ Q I G L T+D +AL++ E ++ V++
Sbjct: 95 NGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVII 154
Query: 208 GGGYIAVEFASIWRGMGSTVDLLFRKELPL-RGFDDEMRAVVARNLEGRGINLHPRTTIK 266
GGGYI +E A + G V ++ R E L R FD E+ ++ L+ + +NL +
Sbjct: 155 GGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLK-KHVNLRLQEITM 213
Query: 267 ELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRT 326
++ E KV+TD G E A++V+ ATG PN + K +GV + +TGA+ +E +T
Sbjct: 214 KIEGEERVEKVVTDAG-EYKAELVILATGIKPNIEL--AKQLGVRIGETGAIWTNEKMQT 270
Query: 327 NVPSIWAVGDVTNRMN----------LTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVF 376
+V +++A GDV + L P G + G + P F
Sbjct: 271 SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKF 330
Query: 377 CIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGA 436
+ GL+E +A+++G F + GR+ +K VVD ET ++LG
Sbjct: 331 MDVEIGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGRE--IWLKGVVDNETNRLLGV 388
Query: 437 SMCGPEA-PEIMQGIAVALKCGATKAQFDSTVGIHPSSA 474
+ G + P I A+ + TK F + + P A
Sbjct: 389 QVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFA 427
>pdb|1F8W|A Chain A, Crystal Structure Of Nadh Peroxidase Mutant: R303m
Length = 447
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 177/433 (40%), Gaps = 74/433 (17%)
Query: 80 KILVYGASFGG--------ELEDARSYGWEVHEKIDF------DWKKLLQKKTDEILRLN 125
K++V G+S GG L W +EK DF + L+ K ++ +
Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQW--YEKGDFISFLSXGMQLYLEGKVKDVNSVR 59
Query: 126 GIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLD---GTKLSYSAKHILIATGSRAQRAP 181
+ + + GV ++ E + P E +VT D G + + ++I+ G+
Sbjct: 60 YMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD 119
Query: 182 IPGQEL-----------AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 230
IPG++L AI + E+ VV+G GYI +E A + G V ++
Sbjct: 120 IPGKDLDNIYLMRGRQWAIKLKQKTVDPEV-NNVVVIGSGYIGIEAAEAFAKAGKKVTVI 178
Query: 231 FRKELPLRGF-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADV 289
+ PL + D E V+ +E I + T++ KV+TD AD+
Sbjct: 179 DILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNA-YDADL 237
Query: 290 VLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT----------N 339
V+ A G PNT L +E+ G +K DE RT+ P ++AVGD T
Sbjct: 238 VVVAVGVRPNTAWLKGT---LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEV 294
Query: 340 RMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVP-------CAVFCIPPLSVVGLSEEQAI 392
+ L A+ +G K + +P KP P AVF + G++E A
Sbjct: 295 NIALATNAMKQGRFAVKNL--EEPVKP----FPGVQGSSGLAVFDY-KFASTGINEVMAQ 347
Query: 393 EQGKGDILV-----FTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGAS-MCGPEAPEI 446
+ GK V + FNP ++K KLV D ET ++LGA M +
Sbjct: 348 KLGKETKAVTVVEDYLMDFNP-------DKQKAWFKLVYDPETTQILGAQLMSKADLTAN 400
Query: 447 MQGIAVALKCGAT 459
+ I++A++ T
Sbjct: 401 INAISLAIQAKMT 413
>pdb|2CDU|A Chain A, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
pdb|2CDU|B Chain B, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
Length = 452
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 169 ILIATGSRAQRAPIPGQE-----LAITSDEALSL-EELPKRAVV--LGGGYIAVEFASIW 220
+++ TGS+ PIPG + L ++A L EE PK + +G GYI E A +
Sbjct: 109 LIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAY 168
Query: 221 RGMGSTVDLLFRKELPL-RGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT 279
V+L+ E L + FD E ++A++ E G+NL + + + ++ + T
Sbjct: 169 SNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKT 228
Query: 280 DHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGD 336
G+EI +D+ + G PNT+ L K ++ GA+ DE ++ I+A GD
Sbjct: 229 LDGKEIKSDIAILCIGFRPNTELLKGKVAMLD---NGAIITDEYMHSSNRDIFAAGD 282
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 176/433 (40%), Gaps = 74/433 (17%)
Query: 80 KILVYGASFGG--------ELEDARSYGWEVHEKIDF------DWKKLLQKKTDEILRLN 125
K++V G+S GG L W +EK DF + L+ K ++ +
Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQW--YEKGDFISFCSCGMQLYLEGKVKDVNSVR 59
Query: 126 GIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLD---GTKLSYSAKHILIATGSRAQRAP 181
+ + + GV ++ E + P E +VT D G + + ++I+ G+
Sbjct: 60 YMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD 119
Query: 182 IPGQEL-----------AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 230
IPG++L AI + E+ VV+G GYI +E A + G V ++
Sbjct: 120 IPGKDLDNIYLMRGRQWAIKLKQKTVDPEV-NNVVVIGSGYIGIEAAEAFAKAGKKVTVI 178
Query: 231 FRKELPLRGF-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADV 289
+ PL + D E V+ +E I + T++ KV+TD AD+
Sbjct: 179 DILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNA-YDADL 237
Query: 290 VLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT----------N 339
V+ A G PNT L +E+ G +K DE RT+ P ++AVGD T
Sbjct: 238 VVVAVGVRPNTAWLKGT---LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEV 294
Query: 340 RMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVP-------CAVFCIPPLSVVGLSEEQAI 392
+ L A +G K + +P KP P AVF + G++E A
Sbjct: 295 NIALATNARKQGRFAVKNL--EEPVKP----FPGVQGSSGLAVFDYK-FASTGINEVMAQ 347
Query: 393 EQGKGDILV-----FTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGAS-MCGPEAPEI 446
+ GK V + FNP ++K KLV D ET ++LGA M +
Sbjct: 348 KLGKETKAVTVVEDYLMDFNP-------DKQKAWFKLVYDPETTQILGAQLMSKADLTAN 400
Query: 447 MQGIAVALKCGAT 459
+ I++A++ T
Sbjct: 401 INAISLAIQAKMT 413
>pdb|1NHS|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 176/433 (40%), Gaps = 74/433 (17%)
Query: 80 KILVYGASFGG--------ELEDARSYGWEVHEKIDF------DWKKLLQKKTDEILRLN 125
K++V G+S GG L W +EK DF + L+ K ++ +
Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQW--YEKGDFISFLCXGMQLYLEGKVKDVNSVR 59
Query: 126 GIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLD---GTKLSYSAKHILIATGSRAQRAP 181
+ + + GV ++ E + P E +VT D G + + ++I+ G+
Sbjct: 60 YMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD 119
Query: 182 IPGQEL-----------AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 230
IPG++L AI + E+ VV+G GYI +E A + G V ++
Sbjct: 120 IPGKDLDNIYLMRGRQWAIKLKQKTVDPEV-NNVVVIGSGYIGIEAAEAFAKAGKKVTVI 178
Query: 231 FRKELPLRGF-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADV 289
+ PL + D E V+ +E I + T++ KV+TD AD+
Sbjct: 179 DILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNA-YDADL 237
Query: 290 VLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT----------N 339
V+ A G PNT L +E+ G +K DE RT+ P ++AVGD T
Sbjct: 238 VVVAVGVRPNTAWLKGT---LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEV 294
Query: 340 RMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVP-------CAVFCIPPLSVVGLSEEQAI 392
+ L A +G K + +P KP P AVF + G++E A
Sbjct: 295 NIALATNARKQGRFAVKNL--EEPVKP----FPGVQGSSGLAVFDYK-FASTGINEVMAQ 347
Query: 393 EQGKGDILV-----FTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGAS-MCGPEAPEI 446
+ GK V + FNP ++K KLV D ET ++LGA M +
Sbjct: 348 KLGKETKAVTVVEDYLMDFNP-------DKQKAWFKLVYDPETTQILGAQLMSKADLTAN 400
Query: 447 MQGIAVALKCGAT 459
+ I++A++ T
Sbjct: 401 INAISLAIQAKMT 413
>pdb|1NHP|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 176/433 (40%), Gaps = 74/433 (17%)
Query: 80 KILVYGASFGG--------ELEDARSYGWEVHEKIDF------DWKKLLQKKTDEILRLN 125
K++V G+S GG L W +EK DF + L+ K ++ +
Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQW--YEKGDFISFLSAGMQLYLEGKVKDVNSVR 59
Query: 126 GIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLD---GTKLSYSAKHILIATGSRAQRAP 181
+ + + GV ++ E + P E +VT D G + + ++I+ G+
Sbjct: 60 YMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD 119
Query: 182 IPGQEL-----------AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 230
IPG++L AI + E+ VV+G GYI +E A + G V ++
Sbjct: 120 IPGKDLDNIYLMRGRQWAIKLKQKTVDPEV-NNVVVIGSGYIGIEAAEAFAKAGKKVTVI 178
Query: 231 FRKELPLRGF-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADV 289
+ PL + D E V+ +E I + T++ KV+TD AD+
Sbjct: 179 DILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNA-YDADL 237
Query: 290 VLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT----------N 339
V+ A G PNT L +E+ G +K DE RT+ P ++AVGD T
Sbjct: 238 VVVAVGVRPNTAWLKGT---LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEV 294
Query: 340 RMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVP-------CAVFCIPPLSVVGLSEEQAI 392
+ L A +G K + +P KP P AVF + G++E A
Sbjct: 295 NIALATNARKQGRFAVKNL--EEPVKP----FPGVQGSSGLAVFDYK-FASTGINEVMAQ 347
Query: 393 EQGKGDILV-----FTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGAS-MCGPEAPEI 446
+ GK V + FNP ++K KLV D ET ++LGA M +
Sbjct: 348 KLGKETKAVTVVEDYLMDFNP-------DKQKAWFKLVYDPETTQILGAQLMSKADLTAN 400
Query: 447 MQGIAVALKCGAT 459
+ I++A++ T
Sbjct: 401 INAISLAIQAKMT 413
>pdb|1JOA|A Chain A, Nadh Peroxidase With Cysteine-Sulfenic Acid
pdb|1NPX|A Chain A, Structure Of Nadh Peroxidase From Streptococcus Faecalis
10c1 Refined At 2.16 Angstroms Resolution
pdb|2NPX|A Chain A, Nadh Binding Site And Catalysis Of Nadh Peroxidase
Length = 447
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 176/433 (40%), Gaps = 74/433 (17%)
Query: 80 KILVYGASFGG--------ELEDARSYGWEVHEKIDF------DWKKLLQKKTDEILRLN 125
K++V G+S GG L W +EK DF + L+ K ++ +
Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQW--YEKGDFISFLSXGMQLYLEGKVKDVNSVR 59
Query: 126 GIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLD---GTKLSYSAKHILIATGSRAQRAP 181
+ + + GV ++ E + P E +VT D G + + ++I+ G+
Sbjct: 60 YMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD 119
Query: 182 IPGQEL-----------AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 230
IPG++L AI + E+ VV+G GYI +E A + G V ++
Sbjct: 120 IPGKDLDNIYLMRGRQWAIKLKQKTVDPEV-NNVVVIGSGYIGIEAAEAFAKAGKKVTVI 178
Query: 231 FRKELPLRGF-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADV 289
+ PL + D E V+ +E I + T++ KV+TD AD+
Sbjct: 179 DILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNA-YDADL 237
Query: 290 VLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT----------N 339
V+ A G PNT L +E+ G +K DE RT+ P ++AVGD T
Sbjct: 238 VVVAVGVRPNTAWLKGT---LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEV 294
Query: 340 RMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVP-------CAVFCIPPLSVVGLSEEQAI 392
+ L A +G K + +P KP P AVF + G++E A
Sbjct: 295 NIALATNARKQGRFAVKNL--EEPVKP----FPGVQGSSGLAVFDYK-FASTGINEVMAQ 347
Query: 393 EQGKGDILV-----FTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGAS-MCGPEAPEI 446
+ GK V + FNP ++K KLV D ET ++LGA M +
Sbjct: 348 KLGKETKAVTVVEDYLMDFNP-------DKQKAWFKLVYDPETTQILGAQLMSKADLTAN 400
Query: 447 MQGIAVALKCGAT 459
+ I++A++ T
Sbjct: 401 INAISLAIQAKMT 413
>pdb|1NHQ|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 176/433 (40%), Gaps = 74/433 (17%)
Query: 80 KILVYGASFGG--------ELEDARSYGWEVHEKIDF------DWKKLLQKKTDEILRLN 125
K++V G+S GG L W +EK DF + L+ K ++ +
Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQW--YEKGDFISFLSSGMQLYLEGKVKDVNSVR 59
Query: 126 GIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLD---GTKLSYSAKHILIATGSRAQRAP 181
+ + + GV ++ E + P E +VT D G + + ++I+ G+
Sbjct: 60 YMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD 119
Query: 182 IPGQEL-----------AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 230
IPG++L AI + E+ VV+G GYI +E A + G V ++
Sbjct: 120 IPGKDLDNIYLMRGRQWAIKLKQKTVDPEV-NNVVVIGSGYIGIEAAEAFAKAGKKVTVI 178
Query: 231 FRKELPLRGF-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADV 289
+ PL + D E V+ +E I + T++ KV+TD AD+
Sbjct: 179 DILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNA-YDADL 237
Query: 290 VLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT----------N 339
V+ A G PNT L +E+ G +K DE RT+ P ++AVGD T
Sbjct: 238 VVVAVGVRPNTAWLKGT---LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEV 294
Query: 340 RMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVP-------CAVFCIPPLSVVGLSEEQAI 392
+ L A +G K + +P KP P AVF + G++E A
Sbjct: 295 NIALATNARKQGRFAVKNL--EEPVKP----FPGVQGSSGLAVFDYK-FASTGINEVMAQ 347
Query: 393 EQGKGDILV-----FTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGAS-MCGPEAPEI 446
+ GK V + FNP ++K KLV D ET ++LGA M +
Sbjct: 348 KLGKETKAVTVVEDYLMDFNP-------DKQKAWFKLVYDPETTQILGAQLMSKADLTAN 400
Query: 447 MQGIAVALKCGAT 459
+ I++A++ T
Sbjct: 401 INAISLAIQAKMT 413
>pdb|3NTD|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
pdb|3NTD|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
Length = 565
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 160/387 (41%), Gaps = 67/387 (17%)
Query: 157 LDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELP--------------K 202
LDG++ S +L++ G+ PIPG + +T SL +P +
Sbjct: 97 LDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTH----SLRNIPDMDRILQTIQMNNVE 152
Query: 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPR 262
A V+GGG+I +E +G LL + + D EM + + +G++L
Sbjct: 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLG 212
Query: 263 TTIKEL-------IKSEEG------------VKVITDHGEEIVADVVLFATGRAPNTKRL 303
T + E+ + S+ + + +GE + D+++ A G P T+
Sbjct: 213 TALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQL- 271
Query: 304 NLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGD-------VTNRMNLTPV---ALMEGTC 353
+ G+ + + G +KV+ +T+ P+I+AVGD VT + L P+ A +G
Sbjct: 272 -ARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRM 330
Query: 354 FAKTVFGGQPCKPDYRDVP-CAVFCIPPLSVVGLSEEQAIEQGKG--DILVFT---SSFN 407
A +FG + + C VF + + G +E+Q + G + V T +S+
Sbjct: 331 AADNMFGREERYQGTQGTAICKVFDL-AVGATGKNEKQLKQAGIAFEKVYVHTASHASYY 389
Query: 408 PMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEA-PEIMQGIAVALKCGATKAQFDST 466
P +S KL+ D + GA G + + + +AVA + G T Q
Sbjct: 390 PGAEVVS-------FKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVEQLQH- 441
Query: 467 VGIHPSSAEEFVTMRSVTRRVAAASSN 493
+ S A + + + V + A +SN
Sbjct: 442 --LELSYAPPYGSAKDVINQAAFVASN 466
>pdb|2V3A|A Chain A, Crystal Structure Of Rubredoxin Reductase From Pseudomonas
Aeruginosa.
pdb|2V3B|A Chain A, Crystal Structure Of The Electron Transfer Complex
Rubredoxin - Rubredoxin Reductase From Pseudomonas
Aeruginosa
Length = 384
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRA-VVARNLEGRGINLH 260
+R ++LG G I EFA+ G +D++ E + G A V LEG G+ H
Sbjct: 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFH 205
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKV 320
+ L K+ EG++ GE I D+V+ A G P T+ A G+ V++ + V
Sbjct: 206 LGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAF--AAGLAVNR--GIVV 261
Query: 321 DENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTV---FGGQPCKPDYRDVP----- 372
D + RT+ +I+A+GD L + +M A+ + G P + Y +P
Sbjct: 262 DRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKT 321
Query: 373 --CAVFCIPP 380
C + PP
Sbjct: 322 PACPLVVSPP 331
>pdb|3NTA|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
pdb|3NTA|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
Length = 574
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 156/387 (40%), Gaps = 67/387 (17%)
Query: 157 LDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELP--------------K 202
LDG++ S +L++ G+ PIPG + +T SL +P +
Sbjct: 97 LDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTH----SLRNIPDXDRILQTIQXNNVE 152
Query: 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPR 262
A V+GGG+I +E +G LL + D E + + +G++L
Sbjct: 153 HATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLG 212
Query: 263 TTIKEL-------IKSEEG------------VKVITDHGEEIVADVVLFATGRAPNTKRL 303
T + E+ + S+ + + +GE + D+++ A G P T+
Sbjct: 213 TALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLA 272
Query: 304 NLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGD-------VTNRMNLTPV---ALMEGTC 353
+ G+ + + G +KV+ +T+ P+I+AVGD VT + L P+ A +G
Sbjct: 273 --RDAGLAIGELGGIKVNAXXQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRX 330
Query: 354 FAKTVFGGQPCKPDYRDVP-CAVFCIPPLSVVGLSEEQAIEQGKG--DILVFT---SSFN 407
A FG + + C VF + + G +E+Q + G + V T +S+
Sbjct: 331 AADNXFGREERYQGTQGTAICKVFDL-AVGATGKNEKQLKQAGIAFEKVYVHTASHASYY 389
Query: 408 PMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGI-AVALKCGATKAQFDST 466
P +S KL+ D + GA G + + + AVA + G T Q
Sbjct: 390 PGAEVVS-------FKLLFDPVKGTIFGAQAVGKDGIDKRIDVXAVAQRAGXTVEQLQH- 441
Query: 467 VGIHPSSAEEFVTMRSVTRRVAAASSN 493
+ S A + + + V + A +SN
Sbjct: 442 --LELSYAPPYGSAKDVINQAAFVASN 466
>pdb|3NT6|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
pdb|3NT6|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
Length = 574
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 156/387 (40%), Gaps = 67/387 (17%)
Query: 157 LDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELP--------------K 202
LDG++ S +L++ G+ PIPG + +T SL +P +
Sbjct: 97 LDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTH----SLRNIPDXDRILQTIQXNNVE 152
Query: 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPR 262
A V+GGG+I +E +G LL + D E + + +G++L
Sbjct: 153 HATVVGGGFIGLEXXESLHHLGIKTTLLELADQVXTPVDREXAGFAHQAIRDQGVDLRLG 212
Query: 263 TTIKEL-------IKSEEG------------VKVITDHGEEIVADVVLFATGRAPNTKRL 303
T + E+ + S+ + + +GE + D+++ A G P T+
Sbjct: 213 TALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLA 272
Query: 304 NLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGD-------VTNRMNLTPV---ALMEGTC 353
+ G+ + + G +KV+ +T+ P+I+AVGD VT + L P+ A +G
Sbjct: 273 --RDAGLAIGELGGIKVNAXXQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRX 330
Query: 354 FAKTVFGGQPCKPDYRDVP-CAVFCIPPLSVVGLSEEQAIEQGKG--DILVFT---SSFN 407
A FG + + C VF + + G +E+Q + G + V T +S+
Sbjct: 331 AADNXFGREERYQGTQGTAICKVFDL-AVGATGKNEKQLKQAGIAFEKVYVHTASHASYY 389
Query: 408 PMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGI-AVALKCGATKAQFDST 466
P +S KL+ D + GA G + + + AVA + G T Q
Sbjct: 390 PGAEVVS-------FKLLFDPVKGTIFGAQAVGKDGIDKRIDVXAVAQRAGXTVEQLQH- 441
Query: 467 VGIHPSSAEEFVTMRSVTRRVAAASSN 493
+ S A + + + V + A +SN
Sbjct: 442 --LELSYAPPYGSAKDVINQAAFVASN 466
>pdb|3CGC|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGC|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGE|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGE|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 13/185 (7%)
Query: 162 LSYSAKHILIATGSRAQRAPIPGQELA------ITSDEALSLEELPKRAV----VLGGGY 211
+S +LIATG R G++L D L+ L V ++GGG
Sbjct: 137 FEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGA 196
Query: 212 IAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKS 271
I +E A + +G V ++ R + +D +M + + + I + +K +
Sbjct: 197 IGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGN 256
Query: 272 EEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSI 331
E V TD G AD+VL + G PNT L + + + GA++V+ +TNV +
Sbjct: 257 ERVEAVETDKGT-YKADLVLVSVGVKPNTDFL--EGTNIRTNHKGAIEVNAYMQTNVQDV 313
Query: 332 WAVGD 336
+A GD
Sbjct: 314 YAAGD 318
>pdb|3FG2|P Chain P, Crystal Structure Of Ferredoxin Reductase For The Cyp199a2
System From Rhodopseudomonas Palustris
Length = 404
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 159 GTKLSYSAKHILIATGSRAQRAPIPGQELAI-----TSDEALSLEE-LP--KRAVVLGGG 210
GT + Y H+++ATG+R + +P L T DE+ L + +P K VV+G G
Sbjct: 94 GTAIEYG--HLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAG 151
Query: 211 YIAVEFASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELI 269
+I +EFA+ R G VD++ + R E+ + G GI +H E+
Sbjct: 152 FIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIA 211
Query: 270 KSEEGVK-VITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNV 328
+ V V+ G + D+V+ G PN + + A G + VD+ T+
Sbjct: 212 AEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVE---IAAAAGLPTAAGII-VDQQLLTSD 267
Query: 329 PSIWAVGDVTNRMNLTPVALMEGTCFAKTV 358
P I A+GD AL E F +T+
Sbjct: 268 PHISAIGD---------CALFESVRFGETM 288
>pdb|2GR3|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
Length = 408
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 149 PNEVEVTQLDGTKLSYSAKHILIATGS--RA----QRAPIPGQELAITSDEALSLEEL-P 201
P V DG L Y +++ATG+ RA Q A +P L D L P
Sbjct: 87 PQAHTVALSDGRTLPYGT--LVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRP 144
Query: 202 K-RAVVLGGGYIAVEFASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINL 259
+ R +++GGG I +E A+ R G V L+ + L R + VAR +G++L
Sbjct: 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDL 204
Query: 260 HPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVK 319
+ + S +GV V+ D G I AD+V+ G N +A G+ D +
Sbjct: 205 RFE---RSVTGSVDGV-VLLDDGTRIAADMVVVGIGVLANDALA--RAAGLACDD--GIF 256
Query: 320 VDENSRTNVPSIWAVGDVTNRMN 342
VD RT P ++A+GDVT + N
Sbjct: 257 VDAYGRTTCPDVYALGDVTRQRN 279
>pdb|1D7Y|A Chain A, Crystal Structure Of Nadh-Dependent Ferredoxin Reductase,
Bpha4
pdb|1F3P|A Chain A, Ferredoxin Reductase (Bpha4)-Nadh Complex
pdb|2GQW|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2GR0|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (oxidized
Form, Nad+ Complex)
pdb|2GR1|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Hydroquinone)
pdb|2GR2|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2YVF|A Chain A, Crystal Structure Of Ferredoxin Reductase Bpha4
(Hydroquinone)
pdb|2YVG|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Blue-Semiquinone)
pdb|2YVJ|A Chain A, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
pdb|2YVJ|P Chain P, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
Length = 408
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 149 PNEVEVTQLDGTKLSYSAKHILIATGS--RA----QRAPIPGQELAITSDEALSLEEL-P 201
P V DG L Y +++ATG+ RA Q A +P L D L P
Sbjct: 87 PQAHTVALSDGRTLPYGT--LVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRP 144
Query: 202 K-RAVVLGGGYIAVEFASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINL 259
+ R +++GGG I +E A+ R G V L+ + L R + VAR +G++L
Sbjct: 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDL 204
Query: 260 HPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVK 319
+ + S +GV V+ D G I AD+V+ G N +A G+ D +
Sbjct: 205 RFE---RSVTGSVDGV-VLLDDGTRIAADMVVVGIGVLANDALA--RAAGLACDD--GIF 256
Query: 320 VDENSRTNVPSIWAVGDVTNRMN 342
VD RT P ++A+GDVT + N
Sbjct: 257 VDAYGRTTCPDVYALGDVTRQRN 279
>pdb|3OC4|A Chain A, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
pdb|3OC4|B Chain B, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
Length = 452
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 24/240 (10%)
Query: 118 TDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRA 177
T+E LR I +LL N V + E +++ E Q YS +++ATG+
Sbjct: 64 TEEELRRQKI--QLLLNREVVAXDVENQLIAWTRKEEQQW------YSYDKLILATGASQ 115
Query: 178 QRAPIPGQE--------LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDL 229
I G + + A+ L E + V+G G I E TV +
Sbjct: 116 FSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGXEAIDFLVKXKKTVHV 175
Query: 230 LFRKE--LPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVA 287
E LP + FD E A V ++LE + + H T+ + ++ G+ V+ +EI
Sbjct: 176 FESLENLLP-KYFDKEXVAEVQKSLEKQAVIFHFEETVLGIEETANGI-VLETSEQEISC 233
Query: 288 DVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVA 347
D +FA P L+ K + +DQT + VD +T+VP+++A+GD + N PVA
Sbjct: 234 DSGIFALNLHPQLAYLD-KKIQRNLDQT--IAVDAYLQTSVPNVFAIGDCISVXN-EPVA 289
>pdb|3CGB|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGB|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 13/192 (6%)
Query: 162 LSYSAKHILIATGSRAQRAPIPGQELA------ITSDEALSLEELPKRAV----VLGGGY 211
+S +LIATG R G++L D L+ L V ++GGG
Sbjct: 137 FEFSYDRLLIATGVRPVXPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGA 196
Query: 212 IAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKS 271
I +E A + +G V + R + +D + + + + I + +K +
Sbjct: 197 IGLEXAETFVELGKKVRXIERNDHIGTIYDGDXAEYIYKEADKHHIEILTNENVKAFKGN 256
Query: 272 EEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSI 331
E V TD G AD+VL + G PNT L + + + GA++V+ +TNV +
Sbjct: 257 ERVEAVETDKGT-YKADLVLVSVGVKPNTDFL--EGTNIRTNHKGAIEVNAYXQTNVQDV 313
Query: 332 WAVGDVTNRMNL 343
+A GD ++
Sbjct: 314 YAAGDCATHYHV 325
>pdb|1TRB|A Chain A, Convergent Evolution Of Similar Function In Two
Structurally Divergent Enzymes
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 156 QLDGTKLSYSAKHILIATGSRAQRAPIPGQEL--------AITSDEALSLEELPKRAVVL 207
+L+G Y+ ++IATG+ A+ +P +E TSD + + V+
Sbjct: 95 RLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQ---KVAVI 151
Query: 208 GGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR---NLEGRGINLHPRTT 264
GGG AVE A + S V L+ R++ GF E + ++ R +E I LH T
Sbjct: 152 GGGNTAVEEALYLSNIASEVHLIHRRD----GFRAE-KILIKRLMDKVENGNIILHTNRT 206
Query: 265 IKELIKSEEGVKVI-------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGA 317
++E+ + GV + +D+ E + + A G +PNT + +E+ + G
Sbjct: 207 LEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQ---LEL-ENGY 262
Query: 318 VKVDEN-----SRTNVPSIWAVGDVTNRMNLTPVALMEGTCFA 355
+KV ++T++P ++A GDV + + + C A
Sbjct: 263 IKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMA 305
>pdb|1TDF|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin
Reductase Refined At 2 Angstrom Resolution: Implications
For A Large Conformational Change During Catalysis
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 156 QLDGTKLSYSAKHILIATGSRAQRAPIPGQEL--------AITSDEALSLEELPKRAVVL 207
+L+G Y+ ++IATG+ A+ +P +E TSD + + V+
Sbjct: 95 RLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQ---KVAVI 151
Query: 208 GGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR---NLEGRGINLHPRTT 264
GGG AVE A + S V L+ R++ GF E + ++ R +E I LH T
Sbjct: 152 GGGNTAVEEALYLSNIASEVHLIHRRD----GFRAE-KILIKRLMDKVENGNIILHTNRT 206
Query: 265 IKELIKSEEGVKVI-------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGA 317
++E+ + GV + +D+ E + + A G +PNT + +E+ + G
Sbjct: 207 LEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQ---LEL-ENGY 262
Query: 318 VKVDEN-----SRTNVPSIWAVGDVTNRMNLTPVALMEGTCFA 355
+KV ++T++P ++A GDV + + + C A
Sbjct: 263 IKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMA 305
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 203 RAVVLGGGYIAVE-FASIW-RGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
+ +V+G GY+++E +++ RG+ T L+ R + + D +M + L+ R I
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPT--LIHRSDKINKLMDADMNQPILDELDKREIPYR 206
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKV 320
+ E I + G ++ G+ D+++ G PN+K + ++ +++D+ G + V
Sbjct: 207 ----LNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGFIPV 260
Query: 321 DENSRTNVPSIWAVGDV 337
++ TNVP+I+A+GD+
Sbjct: 261 NDKFETNVPNIYAIGDI 277
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 203 RAVVLGGGYIAVE-FASIW-RGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
+ +V+G GY+++E +++ RG+ T L+ R + + D +M + L+ R I
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPT--LIHRSDKINKLMDADMNQPILDELDKREIPYR 206
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKV 320
+ E I + G ++ G+ D+++ G PN+K + ++ +++D+ G + V
Sbjct: 207 ----LNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGFIPV 260
Query: 321 DENSRTNVPSIWAVGDV 337
++ TNVP+I+A+GD+
Sbjct: 261 NDKFETNVPNIYAIGDI 277
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 203 RAVVLGGGYIAVE-FASIW-RGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
+ +V+G GY+++E +++ RG+ T L+ R + + D +M + L+ R I
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPT--LIHRSDKINKLMDADMNQPILDELDKREIPYR 206
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKV 320
+ E I + G ++ G+ D+++ G PN+K + ++ +++D+ G + V
Sbjct: 207 ----LNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGFIPV 260
Query: 321 DENSRTNVPSIWAVGDV 337
++ TNVP+I+A+GD+
Sbjct: 261 NDKFETNVPNIYAIGDI 277
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 203 RAVVLGGGYIAVE-FASIW-RGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
+ +V+G GY+++E +++ RG+ T L+ R + + D +M + L+ R I
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPT--LIHRSDKINKLMDADMNQPILDELDKREIPYR 206
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKV 320
+ E I + G ++ G+ D+++ G PN+K + ++ +++D+ G + V
Sbjct: 207 ----LNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGFIPV 260
Query: 321 DENSRTNVPSIWAVGDV 337
++ TNVP+I+A+GD+
Sbjct: 261 NDKFETNVPNIYAIGDI 277
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 203 RAVVLGGGYIAVE-FASIW-RGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
+ +V+G GY+++E +++ RG+ T L+ R + + D +M + L+ R I
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPT--LIHRSDKINKLMDADMNQPILDELDKREIPYR 206
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKV 320
+ E I + G ++ G+ D+++ G PN+K + ++ +++D+ G + V
Sbjct: 207 ----LNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGFIPV 260
Query: 321 DENSRTNVPSIWAVGDV 337
++ TNVP+I+A+GD+
Sbjct: 261 NDKFETNVPNIYAIGDI 277
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 203 RAVVLGGGYIAVE-FASIW-RGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
+ +V+G GY+++E +++ RG+ T L+ R + + D +M + L+ R I
Sbjct: 150 KVLVVGAGYVSLEVLENLYERGLHPT--LIHRSDKINKLMDADMNQPILDELDKREIPYR 207
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKV 320
+ E I + G ++ G+ D+++ G PN+K + ++ +++D+ G + V
Sbjct: 208 ----LNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGFIPV 261
Query: 321 DENSRTNVPSIWAVGDV 337
++ TNVP+I+A+GD+
Sbjct: 262 NDKFETNVPNIYAIGDI 278
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 203 RAVVLGGGYIAVE-FASIW-RGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
+ +V+G GY+++E +++ RG+ T L+ R + + D +M + L+ R I
Sbjct: 149 KVLVVGAGYVSLEVLENLYERGLHPT--LIHRSDKINKLMDADMNQPILDELDKREIPYR 206
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKV 320
+ E I + G ++ G+ D+++ G PN+K + ++ +++D+ G + V
Sbjct: 207 ----LNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGFIPV 260
Query: 321 DENSRTNVPSIWAVGDV 337
++ TNVP+I+A+GD+
Sbjct: 261 NDKFETNVPNIYAIGDI 277
>pdb|3EF6|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Reductase
pdb|4EMI|A Chain A, Toluene Dioxygenase Reductase In Reduced State In Complex
With Nad+
pdb|4EMJ|A Chain A, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 410
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 140 YEGEGKIVGPNEVEVTQLD----------GTKLSYSAKHILIATGSRAQRAPIPGQEL-- 187
+ GE +I EVT LD GT LS A I+IATGSRA+ +PG +L
Sbjct: 66 WYGEARIDMLTGPEVTALDVQTRTISLDDGTTLS--ADAIVIATGSRARTMALPGSQLPG 123
Query: 188 AITSDEALSLEEL------PKRAVVLGGGYIAVEFASIWRGMGSTVDLL-FRKELPLRGF 240
+T ++ L R +++GGG I E A+ R +G +V +L EL +R
Sbjct: 124 VVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVL 183
Query: 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNT 300
+ A + L G+ + T + + +V+ G VAD L G P
Sbjct: 184 GRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPAD 243
Query: 301 KRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTN 339
+ + G+ D+ V VD T ++AVGDV +
Sbjct: 244 QL--ARQAGLACDR--GVIVDHCGATLAKGVFAVGDVAS 278
>pdb|1F6M|A Chain A, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|B Chain B, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|E Chain E, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|F Chain F, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 320
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 156 QLDGTKLSYSAKHILIATGSRAQRAPIPGQEL--------AITSDEALSLEELPKRAVVL 207
+L+G Y+ ++IATG+ A+ +P +E + T D + + V+
Sbjct: 95 RLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSASATCDGFFYRNQ---KVAVI 151
Query: 208 GGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR---NLEGRGINLHPRTT 264
GGG AVE A + S V L+ R++ GF E + ++ R +E I LH T
Sbjct: 152 GGGNTAVEEALYLSNIASEVHLIHRRD----GFRAE-KILIKRLMDKVENGNIILHTNRT 206
Query: 265 IKELIKSEEGVKVI-------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGA 317
++E+ + GV + +D+ E + + A G +PNT + +E+ + G
Sbjct: 207 LEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQ---LEL-ENGY 262
Query: 318 VKVDEN-----SRTNVPSIWAVGDVTNRMNLTPVALMEGTCFA 355
+KV ++T++P ++A GDV + + + C A
Sbjct: 263 IKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMA 305
>pdb|1CL0|A Chain A, Crystal Structure Of Reduced Thioredoxin Reductase From
Escherichia Coli
Length = 320
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 156 QLDGTKLSYSAKHILIATGSRAQRAPIPGQEL-------AITSDEALSLEELPKRAVVLG 208
+L+G Y+ ++IATG+ A+ +P +E A + + ++ V+G
Sbjct: 95 RLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRN--QKVAVIG 152
Query: 209 GGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR---NLEGRGINLHPRTTI 265
GG AVE A + S V L+ R++ GF E + ++ R +E I LH T+
Sbjct: 153 GGNTAVEEALYLSNIASEVHLIHRRD----GFRAE-KILIKRLMDKVENGNIILHTNRTL 207
Query: 266 KELIKSEEGVKVI-------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAV 318
+E+ + GV + +D+ E + + A G +PNT + +E+ + G +
Sbjct: 208 EEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQ---LEL-ENGYI 263
Query: 319 KVDEN-----SRTNVPSIWAVGDVTNRMNLTPVALMEGTCFA 355
KV ++T++P ++A GDV + + + C A
Sbjct: 264 KVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMA 305
>pdb|1TDE|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin
Reductase Refined At 2 Angstrom Resolution: Implications
For A Large Conformational Change During Catalysis
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 156 QLDGTKLSYSAKHILIATGSRAQRAPIPGQEL-------AITSDEALSLEELPKRAVVLG 208
+L+G Y+ ++IATG+ A+ +P +E A + + ++ V+G
Sbjct: 95 RLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRN--QKVAVIG 152
Query: 209 GGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR---NLEGRGINLHPRTTI 265
GG AVE A + S V L+ R++ GF E + ++ R +E I LH T+
Sbjct: 153 GGNTAVEEALYLSNIASEVHLIHRRD----GFRAE-KILIKRLMDKVENGNIILHTNRTL 207
Query: 266 KELIKSEEGVKVI-------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAV 318
+E+ + GV + +D+ E + + A G +PNT + +E+ + G +
Sbjct: 208 EEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQ---LEL-ENGYI 263
Query: 319 KVDEN-----SRTNVPSIWAVGDVTNRMNLTPVALMEGTCFA 355
KV ++T++P ++A GDV + + + C A
Sbjct: 264 KVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMA 305
>pdb|3ICR|A Chain A, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICR|B Chain B, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICS|A Chain A, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICS|B Chain B, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICT|A Chain A, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
pdb|3ICT|B Chain B, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
Length = 588
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 198 EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGI 257
E+ P+ A V+GGG+I VE R G V L+ D E A V + + +
Sbjct: 184 EKKPRHATVIGGGFIGVEXVENLRERGIEVTLVEXANQVXPPIDYEXAAYVHEHXKNHDV 243
Query: 258 NLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGA 317
L + L E G V G I D ++ A G P + K G+ + G
Sbjct: 244 ELVFEDGVDAL--EENGAVVRLKSGSVIQTDXLILAIGVQPESSL--AKGAGLALGVRGT 299
Query: 318 VKVDENSRTNVPSIWAVGD 336
+KV+E +T+ P I+A+GD
Sbjct: 300 IKVNEKFQTSDPHIYAIGD 318
>pdb|3F8D|A Chain A, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|B Chain B, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|C Chain C, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|D Chain D, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
Length = 323
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 30/206 (14%)
Query: 161 KLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEELP----KRAVVLGGGYIAVE 215
K + A +++ G + ++ +PG QE A S+ + P + V+GGG A+E
Sbjct: 109 KGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALE 168
Query: 216 FASIWRGMGSTVDLLFRKELPLRGFDDEMRA--VVARNLEGR-GINLHPRTTIKELIKSE 272
A I + V L+ R+ D +A + ++ + + + +KE IK +
Sbjct: 169 GAEILSSYSTKVYLIHRR--------DTFKAQPIYVETVKKKPNVEFVLNSVVKE-IKGD 219
Query: 273 EGVKVI------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRT 326
+ VK + T +E+ + V G P T K+ G+E D G +KVDE RT
Sbjct: 220 KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFA--KSNGIETDTNGYIKVDEWMRT 277
Query: 327 NVPSIWAVGDVTN-----RMNLTPVA 347
+VP ++A GD T+ R +T VA
Sbjct: 278 SVPGVFAAGDCTSAWLGFRQVITAVA 303
>pdb|3F8P|A Chain A, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|B Chain B, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|C Chain C, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|D Chain D, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8R|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
Length = 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 30/206 (14%)
Query: 161 KLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEELP----KRAVVLGGGYIAVE 215
K + A +++ G + ++ +PG QE A S+ + P + V+GGG A+E
Sbjct: 109 KGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALE 168
Query: 216 FASIWRGMGSTVDLLFRKELPLRGFDDEMRA--VVARNLEGR-GINLHPRTTIKELIKSE 272
A I + V L+ R+ D +A + ++ + + + +KE IK +
Sbjct: 169 GAEILSSYSTKVYLIHRR--------DTFKAQPIYVETVKKKPNVEFVLNSVVKE-IKGD 219
Query: 273 EGVKVI------TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRT 326
+ VK + T +E+ + V G P T K+ G+E D G +KVDE RT
Sbjct: 220 KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFA--KSNGIETDTNGYIKVDEWMRT 277
Query: 327 NVPSIWAVGDVTN-----RMNLTPVA 347
+VP ++A GD T+ R +T VA
Sbjct: 278 SVPGVFAAGDCTSAWLGFRQVITAVA 303
>pdb|4A5L|A Chain A, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica
pdb|4A5L|B Chain B, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica
pdb|4A65|A Chain A, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica With Aucn
pdb|4A65|B Chain B, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica With Aucn
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 34/208 (16%)
Query: 167 KHILIATGSRAQRAPIPGQELAI---TSDEALSLEELP----KRAVVLGGGYIAVEFASI 219
K ++IATG+ A+R +PG++ S A+ +P K +V+GGG A+E A
Sbjct: 111 KSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALH 170
Query: 220 WRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTI---KELIKSE---- 272
GS V +L R+ D RA ++ ++ R +N HP+ + EL++ E
Sbjct: 171 LTKYGSKVIILHRR--------DAFRA--SKTMQERVLN-HPKIEVIWNSELVELEGDGD 219
Query: 273 --EGVKVIT-DHGEEIVADV--VLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTN 327
G K+ GE V V + +A G +PN+K L + V+ G + + E +T+
Sbjct: 220 LLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQ---VKTADDGYI-LTEGPKTS 275
Query: 328 VPSIWAVGDVTNRMNLTPVALMEGTCFA 355
V ++A GDV +R+ + C A
Sbjct: 276 VDGVFACGDVCDRVYRQAIVAAGSGCMA 303
>pdb|3LXD|A Chain A, Crystal Structure Of Ferredoxin Reductase Arr From
Novosphingobium Aromaticivorans
Length = 415
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 83/200 (41%), Gaps = 25/200 (12%)
Query: 158 DGTKLSYSAKHILIATGSRAQRAPIPGQELA-----ITSDEA----LSLEELPKRAVVLG 208
DG+ + Y ++ ATG +R G +LA T ++A L+ K AVV+G
Sbjct: 102 DGSAIEYG--KLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIG 159
Query: 209 GGYIAVEFASIWRGMGSTVDLLFRKELP---LRGFDDEMRAVVARNLEGRGINLHPRTTI 265
GGYI +E A++ G V LL + LP R + + G++L RT
Sbjct: 160 GGYIGLEAAAVLTKFGVNVTLL--EALPRVLARVAGEALSEFYQAEHRAHGVDL--RTGA 215
Query: 266 KELIKSEEGVKVI---TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDE 322
+G KV G I AD+V+ G P L + V VDE
Sbjct: 216 AMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGAL----ISAGASGGNGVDVDE 271
Query: 323 NSRTNVPSIWAVGDVTNRMN 342
RT++ ++A+GD N
Sbjct: 272 FCRTSLTDVYAIGDCAAHAN 291
>pdb|3CTY|A Chain A, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
pdb|3CTY|B Chain B, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
Length = 319
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 49/203 (24%)
Query: 163 SYSAKHILIATGSRAQRAPIPGQE--------LAITSDEALSLEELPKRAVVLGGG---- 210
+Y AK+++I TG+ + + G+ T D L KR V +GGG
Sbjct: 112 TYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFK---GKRVVTIGGGNSGA 168
Query: 211 --------YIA----VEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN 258
Y+ +E+ + + V + ++ +P + ++ +V + G+
Sbjct: 169 IAAISMSEYVKNVTIIEYMPKYMCENAYVQEIKKRNIPYI-MNAQVTEIVGDGKKVTGVK 227
Query: 259 LHPRTTIKELIKSEEGVKVITDHGEE--IVADVVLFATGRAPNTKRLNLKAVGVEVDQTG 316
RTT GEE I D V G P T L K GV++D+ G
Sbjct: 228 YKDRTT-----------------GEEKLIETDGVFIYVGLIPQTSFL--KDSGVKLDERG 268
Query: 317 AVKVDENSRTNVPSIWAVGDVTN 339
+ VD RT+VP ++A GDVT+
Sbjct: 269 YIVVDSRQRTSVPGVYAAGDVTS 291
>pdb|2Q7V|A Chain A, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
pdb|2Q7V|B Chain B, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
Length = 325
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 24/196 (12%)
Query: 159 GTKLSYSAKHILIATGSRAQRAPIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIA 213
G Y AK +++ATG+ ++ IPG++ T K+ VV+GGG A
Sbjct: 105 GYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAA 164
Query: 214 VEFASIWRGMGSTVDLLFRKELPLRGFDDEMRA---VVARNLEGRGINLHPRTTIKEL-- 268
VE V ++ R+ D +RA AR + T ++E+
Sbjct: 165 VEEGMFLTKFADEVTVIHRR--------DTLRANKVAQARAFANPKMKFIWDTAVEEIQG 216
Query: 269 IKSEEGVK---VITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSR 325
S GVK + T E+ D V G PNT + V + G V V +
Sbjct: 217 ADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT---VSLRDDGYVDVRDEIY 273
Query: 326 TNVPSIWAVGDVTNRM 341
TN+P ++A GDV++ +
Sbjct: 274 TNIPMLFAAGDVSDYI 289
>pdb|1XHC|A Chain A, Nadh Oxidase /nitrite Reductase From Pyrococcus Furiosus
Pfu-1140779- 001
Length = 367
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 22/225 (9%)
Query: 169 ILIATGSRAQRAPIPGQELAITSDEALSLEELPK------RAVVLGGGYIAVEFASIWRG 222
+++ATG+RA+ I G+E +T + + + A+++GGG+I +E A
Sbjct: 105 LVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAE 164
Query: 223 MGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHG 282
G V L+ R + L G D+E+ ++ LE G+ + + E +EEG V+T+ G
Sbjct: 165 AGYHVKLIHRGAMFL-GLDEELSNMIKDMLEETGVKFFLNSELLE--ANEEG--VLTNSG 219
Query: 283 EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTG-AVKVDENSRTNVPSIWAVGDVTNRM 341
I V + A G PN + TG + +D+N RT+ ++A+GD
Sbjct: 220 -FIEGKVKICAIGIVPNVDLARRSGI-----HTGRGILIDDNFRTSAKDVYAIGDCAEYS 273
Query: 342 NL---TPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSV 383
+ T A ME + G+P + +++ VF L +
Sbjct: 274 GIIAGTAKAAMEQARVLADILKGEPRRYNFK-FRSTVFKFGKLQI 317
>pdb|3ITJ|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
Length = 338
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 32/190 (16%)
Query: 169 ILIATGSRAQRAPIPGQELAIT---SDEALSLEELP----KRAVVLGGGYIAVEFASIWR 221
I++ATG+ A+R +PG+E S A+ +P K V+GGG A E A
Sbjct: 134 IILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLT 193
Query: 222 GMGSTVDLLFRKE-------LPLRGFDDE----MRAVVARNLEGRGINLHPRTTIKELIK 270
GS V +L RK+ + R +E + VA +G G L IK K
Sbjct: 194 KYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNTKK 252
Query: 271 SEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVK-VDENSRTNVP 329
+EE ++ + +A G P TK + A V+ D+ G +K V +S T+VP
Sbjct: 253 NEE---------TDLPVSGLFYAIGHTPATK---IVAGQVDTDEAGYIKTVPGSSLTSVP 300
Query: 330 SIWAVGDVTN 339
+A GDV +
Sbjct: 301 GFFAAGDVQD 310
>pdb|3D8X|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Nadph
Dependent Thioredoxin Reductase 1
pdb|3D8X|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Nadph
Dependent Thioredoxin Reductase 1
Length = 326
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 32/190 (16%)
Query: 169 ILIATGSRAQRAPIPGQELAIT---SDEALSLEELP----KRAVVLGGGYIAVEFASIWR 221
I++ATG+ A+R +PG+E S A+ +P K V+GGG A E A
Sbjct: 122 IILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLT 181
Query: 222 GMGSTVDLLFRKE-------LPLRGFDDE----MRAVVARNLEGRGINLHPRTTIKELIK 270
GS V +L RK+ + R +E + VA +G G L IK K
Sbjct: 182 KYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNTKK 240
Query: 271 SEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVK-VDENSRTNVP 329
+EE ++ + +A G P TK + A V+ D+ G +K V +S T+VP
Sbjct: 241 NEE---------TDLPVSGLFYAIGHTPATK---IVAGQVDTDEAGYIKTVPGSSLTSVP 288
Query: 330 SIWAVGDVTN 339
+A GDV +
Sbjct: 289 GFFAAGDVQD 298
>pdb|4GCM|A Chain A, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
pdb|4GCM|B Chain B, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
Length = 312
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 31/193 (16%)
Query: 165 SAKHILIATGSRAQRAPIPG-QELA-------ITSDEALSLEELPKRAVVLGGGYIAVEF 216
+AK ++IATG+ ++ +PG QEL D A KR V+GGG AVE
Sbjct: 104 TAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKN---KRLFVIGGGDSAVEE 160
Query: 217 ASIWRGMGSTVDLLFRKELPLRGFDDEMRA---VVARNLEGRGINLHPRTTIKELIKSEE 273
+ V ++ R+ DE+RA + R + I+ T+K + + +
Sbjct: 161 GTFLTKFADKVTIVHRR--------DELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDG 212
Query: 274 GVKVIT-----DHGEEIV-ADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTN 327
V +T D EE AD V G P T K +G+ D G + ++ T+
Sbjct: 213 KVGSVTLTSTKDGSEETHEADGVFIYIGXKPLT--APFKDLGITND-VGYIVTKDDXTTS 269
Query: 328 VPSIWAVGDVTNR 340
VP I+A GDV ++
Sbjct: 270 VPGIFAAGDVRDK 282
>pdb|1FL2|A Chain A, Catalytic Core Component Of The Alkylhydroperoxide
Reductase Ahpf From E.Coli
Length = 310
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 166 AKHILIATGSRAQRAPIPGQELAITSDEALSLEELP---------KRAVVLGGGYIAVEF 216
A+ I++ATG++ + +PG++ T + P KR V+GGG VE
Sbjct: 104 ARSIIVATGAKWRNMNVPGEDQYRTK----GVTYCPHCDGPLFKGKRVAVIGGGNSGVEA 159
Query: 217 ASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGV 275
A G+ V LL F E+ D++ R+L+ I L+ +TT +K +
Sbjct: 160 AIDLAGIVEHVTLLEFAPEMKA----DQVLQDKLRSLKNVDIILNAQTT---EVKGDGSK 212
Query: 276 KVITDHGEEIVADV-------VLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNV 328
V ++ + + D+ + G PNT L VE ++ G + +D TNV
Sbjct: 213 VVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLE---GAVERNRMGEIIIDAKCETNV 269
Query: 329 PSIWAVGDVT 338
++A GD T
Sbjct: 270 KGVFAAGDCT 279
>pdb|1VDC|A Chain A, Structure Of Nadph Dependent Thioredoxin Reductase
Length = 333
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRA---VVARNLEGRGIN 258
K V+GGG A+E A+ GS V ++ R+ D RA + R L I+
Sbjct: 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRR--------DAFRASKIMQQRALSNPKID 211
Query: 259 LHPRTTIKELIKSEE-----GVKV---ITDHGEEIVADVVLFATGRAPNTKRLNLKAVGV 310
+ +++ E E G+KV +T ++ + FA G P TK L+ GV
Sbjct: 212 VIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD---GGV 268
Query: 311 EVDQTGAVKVDE-NSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFA 355
E+D G V ++T+VP ++A GDV ++ + C A
Sbjct: 269 ELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMA 314
>pdb|1Q1R|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1R|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
Length = 431
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 40/265 (15%)
Query: 153 EVTQLDGTKLSYSAKHILIATGSRAQRAPIPG---------QELAITSDEALSLEEL--P 201
+V DG L Y +++ATG R + P+ + L D +L
Sbjct: 92 QVILSDGRALDYD--RLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIAD 149
Query: 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGR-GINLH 260
R VV+GGGYI +E A+ V LL L + +L G+++
Sbjct: 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIR 209
Query: 261 PRTTIKELIKSEEGVK---VITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGA 317
T + S + K V+ + G + AD+V+ G PN + + A G++VD
Sbjct: 210 TGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELAS--AAGLQVDN--G 265
Query: 318 VKVDENSRTNVPSIWAVGDVTN----------RMNLTPVALMEGTCFAKTVFGGQPCKPD 367
+ ++E+ +T+ P I AVGD R+ P AL + A + G P
Sbjct: 266 IVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP---- 321
Query: 368 YRDVPCAVFCIPP----LSVVGLSE 388
RD F L +VGLSE
Sbjct: 322 -RDEAAPWFWSDQYEIGLKMVGLSE 345
>pdb|3LB8|A Chain A, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
pdb|3LB8|B Chain B, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
Length = 436
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 40/265 (15%)
Query: 153 EVTQLDGTKLSYSAKHILIATGSRAQRAPIPG---------QELAITSDEALSLEEL--P 201
+V DG L Y +++ATG R + P+ + L D +L
Sbjct: 91 QVILSDGRALDYD--RLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIAD 148
Query: 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGR-GINLH 260
R VV+GGGYI +E A+ V LL L + +L G+++
Sbjct: 149 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIR 208
Query: 261 PRTTIKELIKSEEGVK---VITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGA 317
T + S + K V+ + G + AD+V+ G PN + + A G++VD
Sbjct: 209 TGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELAS--AAGLQVDN--G 264
Query: 318 VKVDENSRTNVPSIWAVGDVTN----------RMNLTPVALMEGTCFAKTVFGGQPCKPD 367
+ ++E+ +T+ P I AVGD R+ P AL + A + G P
Sbjct: 265 IVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP---- 320
Query: 368 YRDVPCAVFCIPP----LSVVGLSE 388
RD F L +VGLSE
Sbjct: 321 -RDEAAPWFWSDQYEIGLKMVGLSE 344
>pdb|3KLJ|A Chain A, Crystal Structure Of Nadh:rubredoxin Oxidoreductase From
Clostridium Acetobutylicum
Length = 385
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 26/198 (13%)
Query: 147 VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQE--LAITS-DEALSLEELPK- 202
+ PN VT G K+ Y + ++IA+GS A + +P + ++ S D+AL +++ K
Sbjct: 88 IDPNNKLVTLKSGEKIKY--EKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKN 145
Query: 203 --RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL-RGFDDEMRAVVARNLEGRGINL 259
+A ++GGG + +E A G+ + E PL R D + + L+ GI +
Sbjct: 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKI 205
Query: 260 HPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVK 319
+ + +E+ G+ I + V+ A G PN + E+ +
Sbjct: 206 YTNSNFEEM-------------GDLIRSSCVITAVGVKPNLDFIK----DTEIASKRGIL 248
Query: 320 VDENSRTNVPSIWAVGDV 337
V+++ T++ I+A GDV
Sbjct: 249 VNDHMETSIKDIYACGDV 266
>pdb|1HYU|A Chain A, Crystal Structure Of Intact Ahpf
Length = 521
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 166 AKHILIATGSRAQRAPIPGQELAITSDEALSLEELP---------KRAVVLGGGYIAVEF 216
A+ I+IATG++ + +PG++ T + P KR V+GGG VE
Sbjct: 315 ARSIIIATGAKWRNMNVPGEDQYRTK----GVTYCPHCDGPLFKGKRVAVIGGGNSGVEA 370
Query: 217 ASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGV 275
A G+ V LL F E+ D++ R+L+ I L+ +TT +K +
Sbjct: 371 AIDLAGIVEHVTLLEFAPEMKA----DQVLQDKVRSLKNVDIILNAQTT---EVKGDGSK 423
Query: 276 KVITDHGEEIVADV-------VLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNV 328
V ++ + + D+ + G PNT L +E ++ G + +D T+V
Sbjct: 424 VVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLE---GALERNRMGEIIIDAKCETSV 480
Query: 329 PSIWAVGDVT 338
++A GD T
Sbjct: 481 KGVFAAGDCT 490
>pdb|2ZBW|A Chain A, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
pdb|2ZBW|B Chain B, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
Length = 335
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 163 SYSAKHILIATGSRA---QRAPIPGQE--------LAITSDEALSLEELPKRAVVLGGGY 211
+Y+AK ++IA G A +R PG+ A+ S KR +++GGG
Sbjct: 107 AYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKAEFQ----GKRVLIVGGGD 162
Query: 212 IAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKS 271
AV++A + L+ R+ R + ++ + + EGR L P + ++
Sbjct: 163 SAVDWALNLLDTARRITLIHRRP-QFRAHEASVKELXKAHEEGRLEVLTPYELRR--VEG 219
Query: 272 EEGVK---VITDHGEEIVA---DVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSR 325
+E V+ V + +E +A D VL G TK L G+ +++ +KVD
Sbjct: 220 DERVRWAVVFHNQTQEELALEVDAVLILAGYI--TKLGPLANWGLALEKN-KIKVDTTXA 276
Query: 326 TNVPSIWAVGDVTNRMNLTPVALM 349
T++P ++A GD+ P+ ++
Sbjct: 277 TSIPGVYACGDIVTYPGKLPLIVL 300
>pdb|3E1T|A Chain A, Structure And Action Of The Myxobacterial Chondrochloren
Halogenase Cndh, A New Variant Of Fad-Dependent
Halogenases
Length = 512
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE---LPFHPISSEVI-GGVGGTCVIRGCVPK 79
FDL VIG G GG A F A G +V + E P H I ++ V G C + G +
Sbjct: 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDE 67
Query: 80 KI-----LVYGASF-GGELEDARSYGWEVHEKIDFDWKKLLQK-KTDEILRLN----GIY 128
+ G +F G+ + ++G+ H + + +++ + D++L N G+
Sbjct: 68 MKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVD 127
Query: 129 KRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQEL 187
R L+EGE + VG V +G +L A+ I+ A+G+R + + G+ +
Sbjct: 128 VRERHEVIDVLFEGE-RAVG---VRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERV 182
>pdb|2Q0K|A Chain A, Oxidized Thioredoxin Reductase From Helicobacter Pylori In
Complex With Nadp+
pdb|2Q0K|B Chain B, Oxidized Thioredoxin Reductase From Helicobacter Pylori In
Complex With Nadp+
pdb|2Q0L|A Chain A, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|2Q0L|B Chain B, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|3ISH|A Chain A, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|B Chain B, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|C Chain C, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
Length = 311
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 20/189 (10%)
Query: 163 SYSAKHILIATGSRAQRAPIPGQ-----ELAITSDEALSLEELPKRAVVLGGGYIAVEFA 217
++ AK ++IATG +R I G+ + T K VLGGG AVE A
Sbjct: 100 TFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEA 159
Query: 218 SIWRGMGSTVDLLFRKELPLRGFD-DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVK 276
+ V L+ R++ GF + A+N + I ++E+ GV
Sbjct: 160 IYLANICKKVYLIHRRD----GFRCAPITLEHAKNNDK--IEFLTPYVVEEIKGDASGVS 213
Query: 277 VI------TDHGEEIVADVVLFATGRAPNTKRLNLK--AVGVEVDQTGAVKVDENSRTNV 328
+ T+ E+V G N L + ++ + D+ G++ VD + +TNV
Sbjct: 214 SLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNV 273
Query: 329 PSIWAVGDV 337
++A GD+
Sbjct: 274 QGLFAAGDI 282
>pdb|2A87|A Chain A, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
pdb|2A87|B Chain B, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
Length = 335
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 142/362 (39%), Gaps = 79/362 (21%)
Query: 14 PNQEEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVI 73
P + H D+ VIG+G G AA ++A + + L F
Sbjct: 5 PVHDRAHHPVRDVIVIGSGPAGYTAALYAA----RAQLAPLVFE---------------- 44
Query: 74 RGCVPKKILVYGASFGGEL---EDARSY-GWEVHEKIDFDWKKLLQKKTDEILRLNGIYK 129
G SFGG L D +Y G+ + +L+ + ++ LR G
Sbjct: 45 -----------GTSFGGALMTTTDVENYPGF----RNGITGPELMDEMREQALRF-GADL 88
Query: 130 RLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QEL- 187
R+ V L+ GP + VT DG ++ A+ +++A G+ A+ +PG QEL
Sbjct: 89 RMEDVESVSLH-------GPLKSVVTA-DGQ--THRARAVILAMGAAARYLQVPGEQELL 138
Query: 188 -----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDD 242
+ + + + + V+GGG A+E A+ +V L+ R+ D
Sbjct: 139 GRGVSSCATCDGFFFRD--QDIAVIGGGDSAMEEATFLTRFARSVTLVHRR--------D 188
Query: 243 EMRA---VVARNLEGRGINLHPRTTIKELI--KSEEGVKV-ITDHGEEIVADV--VLFAT 294
E RA ++ R I T+ + + G++V T+ G E V V A
Sbjct: 189 EFRASKIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAI 248
Query: 295 GRAPNTKRLNLKAVGVEVDQTGAVKVD-ENSRTNVPSIWAVGDVTNRMNLTPVALMEGTC 353
G P R L ++VD G V V + T++P ++A GD+ +R V C
Sbjct: 249 GHEP---RSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGC 305
Query: 354 FA 355
A
Sbjct: 306 AA 307
>pdb|4FDC|B Chain B, Crystal Structure Of The E493v Mutant Of Human Apoptosis
Inducing Factor (Aif)
Length = 514
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 56/240 (23%)
Query: 132 LSNAGVKLYEGEGKI---VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQEL 187
+ N GV + G+ + V N V++ DG++++Y + LIATG + + I
Sbjct: 118 IENGGVAVLTGKKVVQLDVRDNMVKLN--DGSQITY--EKCLIATGGTPRSLSAIDRAGA 173
Query: 188 AITSDEAL--------SLEELP---KRAVVLGGGYIAVEFASIW----RGMGSTVDLLFR 232
+ S L SLE++ K ++GGG++ E A R +G+ V LF
Sbjct: 174 EVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLF- 232
Query: 233 KELPLRG-----FDDEMRAVVARNLEGRGINLHPRTTI--------KELIKSEEGVKVIT 279
P +G + + + G+ + P + K LIK ++G KV T
Sbjct: 233 ---PEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVET 289
Query: 280 DHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQT-GAVKVDE--NSRTNVPSIWAVGD 336
DH ++ A G PN + K G+E+D G +V+ +R+N IW GD
Sbjct: 290 DH--------IVAAVGLEPNVEL--AKTGGLEIDSDFGGFRVNAELQARSN---IWVAGD 336
>pdb|1M6I|A Chain A, Crystal Structure Of Apoptosis Inducing Factor (Aif)
Length = 493
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 56/240 (23%)
Query: 132 LSNAGVKLYEGEGKI---VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQEL 187
+ N GV + G+ + V N V++ DG++++Y + LIATG + + I
Sbjct: 100 IENGGVAVLTGKKVVQLDVRDNMVKLN--DGSQITY--EKCLIATGGTPRSLSAIDRAGA 155
Query: 188 AITSDEAL--------SLEELP---KRAVVLGGGYIAVEFASIW----RGMGSTVDLLFR 232
+ S L SLE++ K ++GGG++ E A R +G+ V LF
Sbjct: 156 EVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLF- 214
Query: 233 KELPLRG-----FDDEMRAVVARNLEGRGINLHPRTTI--------KELIKSEEGVKVIT 279
P +G + + + G+ + P + K LIK ++G KV T
Sbjct: 215 ---PEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVET 271
Query: 280 DHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQT-GAVKVDE--NSRTNVPSIWAVGD 336
DH ++ A G PN + K G+E+D G +V+ +R+N IW GD
Sbjct: 272 DH--------IVAAVGLEPNVEL--AKTGGLEIDSDFGGFRVNAELQARSN---IWVAGD 318
>pdb|2EEZ|A Chain A, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|C Chain C, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|D Chain D, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|E Chain E, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|F Chain F, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
pdb|2EEZ|G Chain G, Crystal Structure Of Alanine Dehydrogenase From Themus
Thermophilus
Length = 369
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 62/165 (37%), Gaps = 26/165 (15%)
Query: 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260
P V+LGGG + A I GMG+ V +L L+ DD GR I
Sbjct: 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDD--------VFGGRVIT-- 215
Query: 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKA--------VGVEV 312
L +E +K H + ++ VL +AP ++ + V V V
Sbjct: 216 -------LTATEANIKKSVQHADLLIG-AVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAV 267
Query: 313 DQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKT 357
DQ G V+ + P+ G V + P A+ + FA T
Sbjct: 268 DQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALT 312
>pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
Reductase R2 From Chlamydia Trachomatis
Length = 346
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 145 KIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIP-GQELAITSDEALSLEELPKR 203
++V N+V+V QL K ++ +H L + IP G+++ + + LS +E +R
Sbjct: 19 RLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDE--RR 76
Query: 204 AVVLGGGYIA 213
++L G+ +
Sbjct: 77 VILLNLGFFS 86
>pdb|3E0S|A Chain A, Crystal Structure Of An Uncharacterized Protein From
Chlorobium Tepidum
pdb|3E0S|B Chain B, Crystal Structure Of An Uncharacterized Protein From
Chlorobium Tepidum
Length = 326
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 58 PISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKL 113
P+++E G V + + KK+LV+G G E DA E+HE + D KKL
Sbjct: 166 PLAAEPTGDVAAKTIRKAL--KKVLVHGRRTGSETSDA-----ELHE-LRIDCKKL 213
>pdb|3FIM|B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus
Eryingii
Length = 566
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 23 DFDLFVIGAGSGG-VRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKI 81
DFD V+GAG+ G V AAR + + V + E +S E + G + G VP I
Sbjct: 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEA---GVSDENVLGAEAPLLAPGLVPNSI 58
Query: 82 LVY 84
+
Sbjct: 59 FDW 61
>pdb|2VHV|A Chain A, Crystal Structure Of The D270a Mutant Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis In Complex
With Nadh.
pdb|2VHV|B Chain B, Crystal Structure Of The D270a Mutant Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis In Complex
With Nadh
Length = 377
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 25 DLFVIGAGSGGVRAARFSANFGAKVGICEL 54
D+ VIGAG+ G AAR + GA V + ++
Sbjct: 170 DVVVIGAGTAGYNAARIANGMGATVTVLDI 199
>pdb|2VHW|A Chain A, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|B Chain B, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|C Chain C, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|D Chain D, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|E Chain E, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHW|F Chain F, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Open And Closed
Conformation
pdb|2VHX|A Chain A, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|B Chain B, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|C Chain C, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|D Chain D, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|E Chain E, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHX|F Chain F, Crystal Structure Of The Ternary Complex Of L-Alanine
Dehydrogenase From Mycobacterium Tuberculosis With Nad+
And Pyruvate
pdb|2VHY|A Chain A, Crystal Structure Of Apo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2VHY|B Chain B, Crystal Structure Of Apo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2VHZ|A Chain A, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Closed Conformation
pdb|2VHZ|B Chain B, Crystal Structure Of Holo L-Alanine Dehydrogenase From
Mycobacterium Tuberculosis In The Closed Conformation
Length = 377
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 25 DLFVIGAGSGGVRAARFSANFGAKVGICEL 54
D+ VIGAG+ G AAR + GA V + ++
Sbjct: 170 DVVVIGAGTAGYNAARIANGMGATVTVLDI 199
>pdb|2VOE|A Chain A, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|B Chain B, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|C Chain C, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|D Chain D, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|E Chain E, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOE|F Chain F, Crystal Structure Of Rv2780 From M. Tuberculosis H37rv
pdb|2VOJ|A Chain A, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
pdb|2VOJ|C Chain C, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
pdb|2VOJ|E Chain E, Ternary Complex Of M. Tuberculosis Rv2780 With Nad And
Pyruvate
Length = 371
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 25 DLFVIGAGSGGVRAARFSANFGAKVGICEL 54
D+ VIGAG+ G AAR + GA V + ++
Sbjct: 170 DVVVIGAGTAGYNAARIANGMGATVTVLDI 199
>pdb|1LY1|A Chain A, Structure And Mechanism Of T4 Polynucleotide Kinase
Length = 181
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 95 ARSYGWEVHEKI-DFDWKKLLQKKTDE------ILRLNGIYKRLLSNAGVKLYEGEGKIV 147
A+ YGW+V K+ D W +L+++ + I L +YK + G+ +Y G
Sbjct: 100 AKEYGWKVEHKVFDVPWTELVKRNSKRGTKAVPIDVLRSMYKSMREYLGLPVYNG---TP 156
Query: 148 GPNEVEVTQLDGT 160
G + + +DGT
Sbjct: 157 GKPKAVIFDVDGT 169
>pdb|2IA5|A Chain A, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|B Chain B, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|C Chain C, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|D Chain D, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|E Chain E, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|F Chain F, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|G Chain G, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|H Chain H, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|I Chain I, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|J Chain J, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|K Chain K, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium.
pdb|2IA5|L Chain L, T4 Polynucleotide KinasePHOSPHATASE WITH BOUND SULFATE AND
Magnesium
Length = 301
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 95 ARSYGWEVHEKI-DFDWKKLLQKKTDE------ILRLNGIYKRLLSNAGVKLYEGEGKIV 147
A+ YGW+V K+ D W +L+++ + I L +YK + G+ +Y G
Sbjct: 100 AKEYGWKVEHKVFDVPWTELVKRNSKRGTKAVPIDVLRSMYKSMREYLGLPVYNG---TP 156
Query: 148 GPNEVEVTQLDGT 160
G + + +DGT
Sbjct: 157 GKPKAVIFDVDGT 169
>pdb|3GD4|A Chain A, Crystal Structure Of The Reduced, Nad-Bound Form Of Murine
Apoptosis Inducing Factor
pdb|3GD4|B Chain B, Crystal Structure Of The Reduced, Nad-Bound Form Of Murine
Apoptosis Inducing Factor
Length = 511
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 33/153 (21%)
Query: 202 KRAVVLGGGYIAVEFASIW--RGMGSTVDLLFRKELPLRG-----FDDEMRAVVARNLEG 254
K V+GGG++ E A + S ++++ + P +G + ++
Sbjct: 199 KSITVIGGGFLGSELACALGRKSQASGIEVI--QLFPEKGNMGKILPQYLSNWTMEKVKR 256
Query: 255 RGINLHPRTTIKE--------LIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLK 306
G+ + P ++ LIK ++G KV TDH ++ A G PN + K
Sbjct: 257 EGVKVMPNAIVQSVGVSGGRLLIKLKDGRKVETDH--------IVTAVGLEPNVEL--AK 306
Query: 307 AVGVEVDQT-GAVKVDE--NSRTNVPSIWAVGD 336
G+E+D G +V+ +R+N IW GD
Sbjct: 307 TGGLEIDSDFGGFRVNAELQARSN---IWVAGD 336
>pdb|1GV4|A Chain A, Murine Apoptosis-Inducing Factor (Aif)
pdb|1GV4|B Chain B, Murine Apoptosis-Inducing Factor (Aif)
Length = 528
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 33/153 (21%)
Query: 202 KRAVVLGGGYIAVEFASIW--RGMGSTVDLLFRKELPLRG-----FDDEMRAVVARNLEG 254
K V+GGG++ E A + S ++++ + P +G + ++
Sbjct: 218 KSITVIGGGFLGSELACALGRKSQASGIEVI--QLFPEKGNMGKILPQYLSNWTMEKVKR 275
Query: 255 RGINLHPRTTIKE--------LIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLK 306
G+ + P ++ LIK ++G KV TDH ++ A G PN + K
Sbjct: 276 EGVKVMPNAIVQSVGVSGGRLLIKLKDGRKVETDH--------IVTAVGLEPNVEL--AK 325
Query: 307 AVGVEVDQT-GAVKVDE--NSRTNVPSIWAVGD 336
G+E+D G +V+ +R+N IW GD
Sbjct: 326 TGGLEIDSDFGGFRVNAELQARSN---IWVAGD 355
>pdb|3GD3|A Chain A, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|B Chain B, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|C Chain C, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|D Chain D, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
Length = 535
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 33/153 (21%)
Query: 202 KRAVVLGGGYIAVEFASIW--RGMGSTVDLLFRKELPLRG-----FDDEMRAVVARNLEG 254
K V+GGG++ E A + S ++++ + P +G + ++
Sbjct: 223 KSITVIGGGFLGSELACALGRKSQASGIEVI--QLFPEKGNMGKILPQYLSNWTMEKVKR 280
Query: 255 RGINLHPRTTIKE--------LIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLK 306
G+ + P ++ LIK ++G KV TDH ++ A G PN + K
Sbjct: 281 EGVKVMPNAIVQSVGVSGGRLLIKLKDGRKVETDH--------IVTAVGLEPNVEL--AK 330
Query: 307 AVGVEVDQT-GAVKVDE--NSRTNVPSIWAVGD 336
G+E+D G +V+ +R+N IW GD
Sbjct: 331 TGGLEIDSDFGGFRVNAELQARSN---IWVAGD 360
>pdb|1RP0|A Chain A, Crystal Structure Of Thi1 Protein From Arabidopsis
Thaliana
pdb|1RP0|B Chain B, Crystal Structure Of Thi1 Protein From Arabidopsis
Thaliana
Length = 284
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 20 THFDFDLFVIGAGSGGVRAA-RFSANFGAKVGICELPFHPISSEVIGG 66
T+ + D+ V+GAGS G+ AA S N +V I E P +GG
Sbjct: 36 TYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGG 83
>pdb|2VDC|G Chain G, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|H Chain H, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|I Chain I, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|J Chain J, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|K Chain K, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|L Chain L, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications
Length = 456
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 115/302 (38%), Gaps = 51/302 (16%)
Query: 93 EDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEV 152
E+ R+ G+EVH +D L +L ++ + VKL G I PN
Sbjct: 139 EELRAKGYEVHVYDRYDRMGGLLVYGIPGFKL----EKSVVERRVKLLADAGVIYHPN-F 193
Query: 153 EVTQLDGTKLSYSAKHI--LIATG-SRAQRAPIPGQELA--------------------I 189
EV + D + KH+ L+ATG +A+ PG L +
Sbjct: 194 EVGR-DASLPELRRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTV 252
Query: 190 TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGST-VDLLFRKELPLRGFDDEMRAVV 248
+ E SL K VVLGGG A++ G+T V L+R++ + R V
Sbjct: 253 EAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR--KNMPGSQREVA 310
Query: 249 ARNLEG---------RGINLHPRTTIKELIKSEEGV---------KVITDHGEEIVADVV 290
EG G T ++ GV +VI + AD+V
Sbjct: 311 HAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLV 370
Query: 291 LFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSR-TNVPSIWAVGDVTNRMNLTPVALM 349
+ A G P ++V + G + VD ++ TN+ ++A GD+ +L A+
Sbjct: 371 IKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIR 430
Query: 350 EG 351
+G
Sbjct: 431 DG 432
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,578,615
Number of Sequences: 62578
Number of extensions: 624488
Number of successful extensions: 2457
Number of sequences better than 100.0: 182
Number of HSP's better than 100.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 1839
Number of HSP's gapped (non-prelim): 221
length of query: 498
length of database: 14,973,337
effective HSP length: 103
effective length of query: 395
effective length of database: 8,527,803
effective search space: 3368482185
effective search space used: 3368482185
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)