Query 042564
Match_columns 498
No_of_seqs 344 out of 3361
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 12:37:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1b_A TRXR, thioredoxin reduc 100.0 7.1E-82 2.4E-86 652.9 49.7 456 22-480 41-520 (542)
2 4dna_A Probable glutathione re 100.0 2.4E-75 8.3E-80 600.7 48.7 443 23-481 5-450 (463)
3 3dk9_A Grase, GR, glutathione 100.0 3.3E-75 1.1E-79 602.3 48.2 445 22-480 19-477 (478)
4 3dgh_A TRXR-1, thioredoxin red 100.0 8.4E-75 2.9E-79 599.9 50.5 457 22-481 8-475 (483)
5 3qfa_A Thioredoxin reductase 1 100.0 1.1E-74 3.7E-79 602.6 51.5 460 20-481 29-503 (519)
6 2wpf_A Trypanothione reductase 100.0 5.9E-75 2E-79 601.2 48.8 459 20-481 4-475 (495)
7 3urh_A Dihydrolipoyl dehydroge 100.0 3.7E-74 1.3E-78 596.2 54.5 449 20-482 22-482 (491)
8 2hqm_A GR, grase, glutathione 100.0 1.6E-74 5.3E-79 596.6 51.2 452 17-479 5-469 (479)
9 3dgz_A Thioredoxin reductase 2 100.0 9.9E-75 3.4E-79 599.8 49.4 458 22-481 5-475 (488)
10 3o0h_A Glutathione reductase; 100.0 6E-75 2E-79 600.9 47.1 451 17-482 19-471 (484)
11 1ges_A Glutathione reductase; 100.0 6.8E-75 2.3E-79 594.7 46.9 443 21-479 2-448 (450)
12 1fec_A Trypanothione reductase 100.0 1.8E-74 6.1E-79 597.2 49.8 457 22-481 2-471 (490)
13 3l8k_A Dihydrolipoyl dehydroge 100.0 1.2E-73 4E-78 588.4 51.9 440 21-482 2-455 (466)
14 2r9z_A Glutathione amide reduc 100.0 1.1E-73 3.8E-78 587.5 50.3 445 20-481 1-448 (463)
15 3lad_A Dihydrolipoamide dehydr 100.0 1.6E-73 5.4E-78 589.7 50.3 455 22-482 2-462 (476)
16 3ic9_A Dihydrolipoamide dehydr 100.0 9.3E-74 3.2E-78 592.1 47.5 452 23-490 8-473 (492)
17 2qae_A Lipoamide, dihydrolipoy 100.0 1.3E-72 4.3E-77 581.5 52.8 449 23-482 2-459 (468)
18 1ojt_A Surface protein; redox- 100.0 5.8E-73 2E-77 585.7 50.3 452 20-483 3-469 (482)
19 1onf_A GR, grase, glutathione 100.0 9.9E-73 3.4E-77 586.0 50.9 445 23-481 2-496 (500)
20 2eq6_A Pyruvate dehydrogenase 100.0 2.9E-72 1E-76 577.4 51.2 440 23-482 6-452 (464)
21 1zmd_A Dihydrolipoyl dehydroge 100.0 4.9E-72 1.7E-76 578.0 51.4 449 22-482 5-464 (474)
22 1ebd_A E3BD, dihydrolipoamide 100.0 9.4E-72 3.2E-76 572.9 52.9 445 23-481 3-451 (455)
23 1xdi_A RV3303C-LPDA; reductase 100.0 3.8E-72 1.3E-76 582.0 49.4 449 23-482 2-462 (499)
24 2a8x_A Dihydrolipoyl dehydroge 100.0 6.4E-72 2.2E-76 575.6 49.8 447 23-482 3-455 (464)
25 1dxl_A Dihydrolipoamide dehydr 100.0 2.5E-71 8.5E-76 572.6 49.8 449 22-482 5-461 (470)
26 1zk7_A HGII, reductase, mercur 100.0 2E-70 6.8E-75 565.0 55.9 448 20-482 1-453 (467)
27 1v59_A Dihydrolipoamide dehydr 100.0 7.7E-70 2.6E-74 562.4 50.1 449 21-482 3-469 (478)
28 1lvl_A Dihydrolipoamide dehydr 100.0 1.9E-69 6.4E-74 555.6 48.7 439 23-482 5-449 (458)
29 2yqu_A 2-oxoglutarate dehydrog 100.0 2.5E-69 8.5E-74 554.9 49.4 444 23-482 1-446 (455)
30 1mo9_A ORF3; nucleotide bindin 100.0 7.1E-70 2.4E-74 567.3 41.1 441 19-485 39-518 (523)
31 2x8g_A Thioredoxin glutathione 100.0 9.5E-68 3.3E-72 561.0 49.8 459 21-481 105-582 (598)
32 4eqs_A Coenzyme A disulfide re 100.0 1.8E-61 6.1E-66 492.6 36.2 400 25-478 2-427 (437)
33 3kd9_A Coenzyme A disulfide re 100.0 2.2E-59 7.4E-64 480.2 40.4 415 23-490 3-443 (449)
34 3oc4_A Oxidoreductase, pyridin 100.0 1.7E-59 5.7E-64 481.3 37.3 408 24-486 3-437 (452)
35 3iwa_A FAD-dependent pyridine 100.0 3.8E-59 1.3E-63 481.4 38.6 420 23-486 3-456 (472)
36 2cdu_A NADPH oxidase; flavoenz 100.0 3.4E-57 1.2E-61 464.4 43.2 412 24-484 1-440 (452)
37 2bc0_A NADH oxidase; flavoprot 100.0 1.2E-57 4E-62 471.9 37.4 409 23-485 35-486 (490)
38 3cgb_A Pyridine nucleotide-dis 100.0 2.8E-57 9.5E-62 467.9 39.2 415 23-486 36-478 (480)
39 1nhp_A NADH peroxidase; oxidor 100.0 8.3E-57 2.8E-61 460.8 38.0 412 24-487 1-442 (447)
40 3ics_A Coenzyme A-disulfide re 100.0 9.5E-57 3.3E-61 475.9 33.9 404 22-477 35-470 (588)
41 3ntd_A FAD-dependent pyridine 100.0 1.8E-56 6.1E-61 472.3 34.6 405 24-478 2-455 (565)
42 2v3a_A Rubredoxin reductase; a 100.0 1.2E-47 4E-52 385.3 26.5 359 21-451 2-377 (384)
43 3klj_A NAD(FAD)-dependent dehy 100.0 8.5E-48 2.9E-52 384.8 23.8 362 22-479 8-384 (385)
44 1xhc_A NADH oxidase /nitrite r 100.0 2.2E-47 7.4E-52 380.1 19.9 333 24-444 9-354 (367)
45 1q1r_A Putidaredoxin reductase 100.0 1.6E-45 5.3E-50 374.8 27.4 379 22-473 3-411 (431)
46 2gqw_A Ferredoxin reductase; f 100.0 3.3E-44 1.1E-48 362.6 36.1 364 22-466 6-395 (408)
47 3lxd_A FAD-dependent pyridine 100.0 9.2E-43 3.2E-47 353.3 30.4 369 22-465 8-405 (415)
48 3ef6_A Toluene 1,2-dioxygenase 100.0 4.7E-43 1.6E-47 354.5 26.5 366 24-465 3-393 (410)
49 3fg2_P Putative rubredoxin red 100.0 7E-42 2.4E-46 345.5 28.3 367 24-465 2-394 (404)
50 4gcm_A TRXR, thioredoxin reduc 100.0 1E-40 3.5E-45 325.5 32.1 285 22-359 5-302 (312)
51 4a5l_A Thioredoxin reductase; 100.0 5.3E-40 1.8E-44 320.6 26.9 292 20-359 1-308 (314)
52 2q7v_A Thioredoxin reductase; 100.0 4.1E-38 1.4E-42 308.8 31.3 288 20-360 5-309 (325)
53 1m6i_A Programmed cell death p 100.0 5.2E-39 1.8E-43 332.0 26.1 326 18-373 6-361 (493)
54 2q0l_A TRXR, thioredoxin reduc 100.0 1.7E-37 6E-42 302.4 32.9 284 24-359 2-305 (311)
55 3cty_A Thioredoxin reductase; 100.0 2.4E-37 8.1E-42 302.6 31.6 287 19-359 12-312 (319)
56 4fk1_A Putative thioredoxin re 100.0 6.5E-38 2.2E-42 304.4 25.6 281 21-359 4-296 (304)
57 3f8d_A Thioredoxin reductase ( 100.0 2.3E-37 8E-42 302.8 28.9 284 23-359 15-313 (323)
58 3r9u_A Thioredoxin reductase; 100.0 7.3E-37 2.5E-41 298.2 31.1 289 22-359 3-308 (315)
59 2zbw_A Thioredoxin reductase; 100.0 3.6E-37 1.2E-41 303.4 28.6 293 22-360 4-314 (335)
60 1fl2_A Alkyl hydroperoxide red 100.0 1.1E-36 3.8E-41 296.5 31.1 282 23-359 1-301 (310)
61 1trb_A Thioredoxin reductase; 100.0 1.2E-36 4.2E-41 297.5 27.6 287 22-359 4-310 (320)
62 3fbs_A Oxidoreductase; structu 100.0 1.4E-36 4.7E-41 293.7 25.6 276 23-359 2-288 (297)
63 3itj_A Thioredoxin reductase 1 100.0 1.6E-36 5.4E-41 298.9 26.2 294 18-359 17-331 (338)
64 2a87_A TRXR, TR, thioredoxin r 100.0 2.7E-36 9.1E-41 297.2 26.8 289 19-359 10-312 (335)
65 3ab1_A Ferredoxin--NADP reduct 100.0 2.4E-36 8.1E-41 300.6 25.7 295 20-360 11-325 (360)
66 4g6h_A Rotenone-insensitive NA 100.0 4.9E-37 1.7E-41 316.8 19.3 291 23-360 42-398 (502)
67 3lzw_A Ferredoxin--NADP reduct 100.0 2.2E-36 7.6E-41 297.1 22.7 286 23-360 7-312 (332)
68 1vdc_A NTR, NADPH dependent th 100.0 5.7E-35 1.9E-39 287.4 28.2 289 23-359 8-319 (333)
69 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.4E-34 4.9E-39 300.6 30.5 284 21-359 210-512 (521)
70 3d1c_A Flavin-containing putat 100.0 2.1E-35 7.3E-40 294.6 22.2 313 23-361 4-337 (369)
71 4a9w_A Monooxygenase; baeyer-v 100.0 9E-34 3.1E-38 281.1 22.8 300 23-360 3-349 (357)
72 3sx6_A Sulfide-quinone reducta 100.0 1.8E-33 6.1E-38 286.8 23.3 282 23-359 4-340 (437)
73 2xve_A Flavin-containing monoo 100.0 9.2E-33 3.1E-37 283.1 25.3 305 24-362 3-340 (464)
74 2vdc_G Glutamate synthase [NAD 100.0 6.5E-34 2.2E-38 289.8 16.5 276 22-359 121-440 (456)
75 1gte_A Dihydropyrimidine dehyd 100.0 7.1E-34 2.4E-38 316.4 16.7 277 23-360 187-505 (1025)
76 3h8l_A NADH oxidase; membrane 100.0 2.3E-32 7.7E-37 276.5 21.3 281 24-360 2-333 (409)
77 3vrd_B FCCB subunit, flavocyto 100.0 2.1E-33 7.1E-38 283.5 13.4 282 24-359 3-320 (401)
78 2gv8_A Monooxygenase; FMO, FAD 100.0 2.9E-31 1E-35 271.3 22.1 298 22-361 5-360 (447)
79 3hyw_A Sulfide-quinone reducta 100.0 6.3E-32 2.1E-36 274.6 16.6 281 24-359 3-329 (430)
80 3h28_A Sulfide-quinone reducta 100.0 4.1E-32 1.4E-36 276.3 15.3 280 24-359 3-329 (430)
81 1lqt_A FPRA; NADP+ derivative, 100.0 4.7E-32 1.6E-36 276.5 15.0 276 23-360 3-384 (456)
82 3s5w_A L-ornithine 5-monooxyge 100.0 3E-30 1E-34 265.4 25.5 313 22-359 29-445 (463)
83 2gag_A Heterotetrameric sarcos 100.0 9.7E-31 3.3E-35 289.2 21.7 279 18-360 123-441 (965)
84 1cjc_A Protein (adrenodoxin re 100.0 2.6E-31 9E-36 271.3 15.4 276 23-360 6-392 (460)
85 1o94_A Tmadh, trimethylamine d 100.0 1.5E-31 5.1E-36 288.2 14.3 274 21-361 387-698 (729)
86 3k30_A Histamine dehydrogenase 100.0 4.5E-31 1.5E-35 283.4 13.1 270 18-361 386-673 (690)
87 1y56_A Hypothetical protein PH 100.0 4.5E-29 1.5E-33 257.7 18.3 254 22-360 107-374 (493)
88 1ps9_A 2,4-dienoyl-COA reducta 100.0 6.6E-29 2.3E-33 265.9 20.3 255 22-358 372-671 (671)
89 3gwf_A Cyclohexanone monooxyge 100.0 9.9E-29 3.4E-33 256.9 19.1 300 23-359 8-453 (540)
90 3uox_A Otemo; baeyer-villiger 99.9 8.1E-27 2.8E-31 242.7 21.8 303 22-359 8-462 (545)
91 4ap3_A Steroid monooxygenase; 99.9 3E-26 1E-30 238.7 21.3 301 21-359 19-467 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 9.6E-26 3.3E-30 235.6 17.7 303 22-359 15-462 (542)
93 2ywl_A Thioredoxin reductase r 99.9 2.9E-23 1E-27 184.9 15.9 151 203-360 3-168 (180)
94 2e5v_A L-aspartate oxidase; ar 99.8 4.3E-22 1.5E-26 204.1 2.2 311 25-358 1-364 (472)
95 4b63_A L-ornithine N5 monooxyg 99.8 5.1E-18 1.7E-22 175.2 29.2 236 123-360 146-484 (501)
96 2gqf_A Hypothetical protein HI 99.8 2.3E-19 7.9E-24 179.8 3.9 201 22-242 3-267 (401)
97 3fpz_A Thiazole biosynthetic e 99.7 2.6E-20 8.8E-25 182.1 -15.8 244 22-359 64-321 (326)
98 2cul_A Glucose-inhibited divis 99.6 1.4E-15 4.9E-20 140.7 11.6 157 202-360 4-229 (232)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.6 1.9E-17 6.4E-22 168.2 -1.9 96 243-340 205-308 (431)
100 3ces_A MNMG, tRNA uridine 5-ca 99.6 8.3E-15 2.8E-19 152.3 13.3 170 22-231 27-220 (651)
101 2zxi_A TRNA uridine 5-carboxym 99.5 1E-13 3.4E-18 143.7 12.0 171 22-232 26-220 (637)
102 1chu_A Protein (L-aspartate ox 99.3 9.2E-12 3.1E-16 129.3 11.0 32 22-54 7-38 (540)
103 1rp0_A ARA6, thiazole biosynth 99.3 1.5E-11 5.1E-16 117.2 10.4 159 202-360 40-272 (284)
104 1kf6_A Fumarate reductase flav 99.2 4.9E-11 1.7E-15 125.3 12.7 32 23-54 5-38 (602)
105 3dme_A Conserved exported prot 99.2 5.8E-10 2E-14 110.0 19.1 58 241-298 149-209 (369)
106 3cp8_A TRNA uridine 5-carboxym 99.2 2.7E-12 9.2E-17 133.5 2.0 174 19-231 17-214 (641)
107 3gyx_A Adenylylsulfate reducta 99.2 2.1E-10 7E-15 121.4 15.8 34 22-55 21-60 (662)
108 3v76_A Flavoprotein; structura 99.1 5.8E-10 2E-14 111.8 14.9 57 242-299 132-188 (417)
109 1ryi_A Glycine oxidase; flavop 99.0 8.1E-10 2.8E-14 109.8 12.0 58 241-299 163-220 (382)
110 1y56_B Sarcosine oxidase; dehy 99.0 1.3E-08 4.6E-13 101.0 20.1 57 241-298 148-205 (382)
111 2gag_B Heterotetrameric sarcos 99.0 5.9E-09 2E-13 104.3 17.3 57 241-298 173-230 (405)
112 3nix_A Flavoprotein/dehydrogen 99.0 4.9E-09 1.7E-13 105.6 15.8 57 242-298 106-166 (421)
113 3ps9_A TRNA 5-methylaminomethy 99.0 1.6E-08 5.4E-13 108.2 19.4 59 241-299 416-474 (676)
114 2oln_A NIKD protein; flavoprot 99.0 2.9E-08 1E-12 99.1 20.3 55 242-297 153-207 (397)
115 3nlc_A Uncharacterized protein 99.0 1.9E-09 6.7E-14 111.2 11.9 59 242-300 220-279 (549)
116 2cul_A Glucose-inhibited divis 99.0 1.9E-09 6.6E-14 99.3 10.5 121 23-179 3-127 (232)
117 3pvc_A TRNA 5-methylaminomethy 99.0 1.2E-08 4.3E-13 109.2 18.3 59 241-299 411-470 (689)
118 2gf3_A MSOX, monomeric sarcosi 99.0 3.3E-08 1.1E-12 98.3 19.9 72 225-299 135-206 (389)
119 2i0z_A NAD(FAD)-utilizing dehy 99.0 4.3E-09 1.5E-13 106.9 13.4 141 22-177 25-191 (447)
120 2ywl_A Thioredoxin reductase r 99.0 3.4E-09 1.1E-13 93.5 10.8 109 24-179 2-112 (180)
121 3rp8_A Flavoprotein monooxygen 98.9 5.6E-09 1.9E-13 104.7 13.4 58 242-301 127-184 (407)
122 1rp0_A ARA6, thiazole biosynth 98.9 8.6E-09 3E-13 98.0 13.5 33 22-54 38-71 (284)
123 3i3l_A Alkylhalidase CMLS; fla 98.9 1.3E-08 4.4E-13 106.6 15.4 58 242-299 128-189 (591)
124 3cgv_A Geranylgeranyl reductas 98.9 1E-08 3.5E-13 102.2 14.0 56 243-298 103-162 (397)
125 1y0p_A Fumarate reductase flav 98.9 4.6E-09 1.6E-13 110.1 11.3 32 23-54 126-157 (571)
126 3dje_A Fructosyl amine: oxygen 98.9 5.2E-08 1.8E-12 98.6 17.7 59 241-299 160-222 (438)
127 2bry_A NEDD9 interacting prote 98.9 6E-09 2E-13 107.2 10.1 137 21-182 90-235 (497)
128 2uzz_A N-methyl-L-tryptophan o 98.9 6.7E-08 2.3E-12 95.4 17.4 56 242-298 149-204 (372)
129 4at0_A 3-ketosteroid-delta4-5a 98.9 2.9E-08 9.9E-13 102.5 15.1 34 21-54 39-72 (510)
130 2bry_A NEDD9 interacting prote 98.8 1.6E-09 5.4E-14 111.5 5.2 138 165-302 37-234 (497)
131 4gut_A Lysine-specific histone 98.8 2.2E-09 7.5E-14 115.4 6.1 42 255-296 542-583 (776)
132 3oz2_A Digeranylgeranylglycero 98.8 2.4E-08 8.3E-13 99.2 12.7 57 243-299 103-163 (397)
133 1qo8_A Flavocytochrome C3 fuma 98.8 3.2E-08 1.1E-12 103.5 14.1 33 22-54 120-152 (566)
134 3nyc_A D-arginine dehydrogenas 98.8 4.7E-08 1.6E-12 96.8 14.5 57 241-298 153-209 (381)
135 3e1t_A Halogenase; flavoprotei 98.8 2.4E-08 8.2E-13 103.2 12.6 33 22-54 6-38 (512)
136 3jsk_A Cypbp37 protein; octame 98.8 5E-09 1.7E-13 100.9 6.9 48 23-79 79-128 (344)
137 1pj5_A N,N-dimethylglycine oxi 98.8 1.1E-07 3.9E-12 104.0 18.5 57 241-298 150-207 (830)
138 4dgk_A Phytoene dehydrogenase; 98.8 8.2E-08 2.8E-12 98.9 16.1 58 242-299 221-279 (501)
139 3alj_A 2-methyl-3-hydroxypyrid 98.8 5.5E-08 1.9E-12 96.5 13.7 32 23-54 11-42 (379)
140 3axb_A Putative oxidoreductase 98.8 2E-08 6.7E-13 102.1 10.6 56 242-298 181-254 (448)
141 3ka7_A Oxidoreductase; structu 98.8 1.3E-07 4.5E-12 95.2 16.1 59 242-301 196-255 (425)
142 3nrn_A Uncharacterized protein 98.7 2E-08 7E-13 101.1 9.7 58 241-300 188-245 (421)
143 4a9w_A Monooxygenase; baeyer-v 98.7 1.7E-07 5.7E-12 91.8 15.4 96 202-298 4-132 (357)
144 2h88_A Succinate dehydrogenase 98.7 4.2E-08 1.4E-12 103.0 10.9 34 21-54 16-49 (621)
145 3kkj_A Amine oxidase, flavin-c 98.7 1.4E-08 4.9E-13 95.3 5.8 41 23-72 2-42 (336)
146 2wdq_A Succinate dehydrogenase 98.7 7.4E-08 2.5E-12 100.9 10.9 32 23-54 7-38 (588)
147 1yvv_A Amine oxidase, flavin-c 98.7 1.5E-07 5.2E-12 91.4 12.5 32 23-54 2-33 (336)
148 1d4d_A Flavocytochrome C fumar 98.7 2.9E-07 1E-11 96.2 15.4 32 23-54 126-157 (572)
149 2xdo_A TETX2 protein; tetracyc 98.6 2.8E-07 9.6E-12 92.0 13.9 43 11-54 15-57 (398)
150 2e4g_A Tryptophan halogenase; 98.6 4.4E-07 1.5E-11 94.5 15.8 58 242-300 194-254 (550)
151 2aqj_A Tryptophan halogenase, 98.6 2.5E-07 8.6E-12 96.1 13.6 33 22-54 4-39 (538)
152 3f8d_A Thioredoxin reductase ( 98.6 2.4E-07 8.3E-12 89.3 12.4 100 202-302 16-129 (323)
153 2gmh_A Electron transfer flavo 98.6 3.3E-07 1.1E-11 96.0 14.1 33 22-54 34-72 (584)
154 2zbw_A Thioredoxin reductase; 98.6 6.6E-07 2.3E-11 86.9 14.9 96 202-297 6-120 (335)
155 2x3n_A Probable FAD-dependent 98.6 3.7E-07 1.3E-11 91.1 12.9 32 23-54 6-37 (399)
156 3atr_A Conserved archaeal prot 98.6 1.2E-07 4.2E-12 96.3 9.4 33 22-54 5-37 (453)
157 3lzw_A Ferredoxin--NADP reduct 98.6 2.4E-07 8.1E-12 89.8 11.1 100 202-302 8-130 (332)
158 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 1.8E-07 6E-12 91.4 10.2 31 24-54 2-35 (342)
159 3fbs_A Oxidoreductase; structu 98.6 6.2E-07 2.1E-11 85.3 13.7 100 202-302 3-116 (297)
160 2q0l_A TRXR, thioredoxin reduc 98.6 7.3E-07 2.5E-11 85.6 14.2 99 203-302 3-118 (311)
161 1k0i_A P-hydroxybenzoate hydro 98.6 4E-07 1.4E-11 90.6 12.6 32 23-54 2-33 (394)
162 2bs2_A Quinol-fumarate reducta 98.6 1.1E-06 3.6E-11 93.0 16.3 32 23-54 5-36 (660)
163 3ihg_A RDME; flavoenzyme, anth 98.5 5.7E-07 1.9E-11 93.4 13.8 33 22-54 4-36 (535)
164 3c4n_A Uncharacterized protein 98.5 1.7E-07 5.8E-12 93.8 9.5 32 23-54 36-69 (405)
165 3fmw_A Oxygenase; mithramycin, 98.5 3.1E-07 1.1E-11 95.8 11.7 33 22-54 48-80 (570)
166 3da1_A Glycerol-3-phosphate de 98.5 5.2E-07 1.8E-11 94.0 13.0 58 241-298 169-232 (561)
167 2qa1_A PGAE, polyketide oxygen 98.5 2E-07 6.8E-12 95.9 9.5 36 19-54 7-42 (500)
168 3ab1_A Ferredoxin--NADP reduct 98.5 1.2E-06 4.2E-11 86.0 14.7 97 202-298 15-131 (360)
169 3itj_A Thioredoxin reductase 1 98.5 4.6E-07 1.6E-11 87.9 11.4 101 201-302 22-146 (338)
170 3c96_A Flavin-containing monoo 98.5 4.8E-07 1.6E-11 90.7 11.8 34 21-54 2-36 (410)
171 2vou_A 2,6-dihydroxypyridine h 98.5 4.6E-07 1.6E-11 90.4 11.6 32 23-54 5-36 (397)
172 3alj_A 2-methyl-3-hydroxypyrid 98.5 1.2E-06 4.1E-11 86.7 13.1 97 201-300 11-162 (379)
173 2gqf_A Hypothetical protein HI 98.5 1.1E-06 3.8E-11 87.5 12.7 98 202-300 5-170 (401)
174 2pyx_A Tryptophan halogenase; 98.4 1.3E-06 4.5E-11 90.4 13.0 54 124-179 177-235 (526)
175 2gjc_A Thiazole biosynthetic e 98.4 8.7E-08 3E-12 91.8 3.7 33 22-54 64-98 (326)
176 1jnr_A Adenylylsulfate reducta 98.4 2.4E-06 8.3E-11 90.4 14.7 35 21-55 20-58 (643)
177 3klj_A NAD(FAD)-dependent dehy 98.4 1.1E-06 3.9E-11 87.0 11.4 99 202-302 10-120 (385)
178 3d1c_A Flavin-containing putat 98.4 2.6E-06 8.8E-11 83.8 13.9 98 202-300 5-145 (369)
179 2q7v_A Thioredoxin reductase; 98.4 1.9E-06 6.3E-11 83.3 12.6 99 202-301 9-126 (325)
180 2x3n_A Probable FAD-dependent 98.4 1.3E-06 4.4E-11 87.1 11.6 99 202-300 7-168 (399)
181 1fl2_A Alkyl hydroperoxide red 98.4 1.4E-06 4.7E-11 83.6 11.3 99 203-301 3-118 (310)
182 2qcu_A Aerobic glycerol-3-phos 98.4 6.5E-06 2.2E-10 84.6 17.0 32 23-54 3-34 (501)
183 2qa2_A CABE, polyketide oxygen 98.4 2.6E-06 8.8E-11 87.5 13.9 33 22-54 11-43 (499)
184 2gv8_A Monooxygenase; FMO, FAD 98.4 1.7E-06 5.7E-11 87.8 12.2 101 201-301 6-182 (447)
185 1vdc_A NTR, NADPH dependent th 98.4 1.1E-06 3.9E-11 85.1 10.5 99 202-302 9-128 (333)
186 4gde_A UDP-galactopyranose mut 98.4 1.6E-07 5.3E-12 97.1 4.5 53 242-296 222-274 (513)
187 2dkh_A 3-hydroxybenzoate hydro 98.4 3E-06 1E-10 89.8 14.2 38 17-54 26-64 (639)
188 2vou_A 2,6-dihydroxypyridine h 98.4 2.3E-06 7.8E-11 85.3 12.4 100 201-300 5-155 (397)
189 3gwf_A Cyclohexanone monooxyge 98.4 3.5E-06 1.2E-10 87.3 14.2 100 202-301 9-152 (540)
190 4ap3_A Steroid monooxygenase; 98.4 1.8E-06 6.3E-11 89.5 12.1 100 202-301 22-164 (549)
191 2bcg_G Secretory pathway GDP d 98.4 3.3E-07 1.1E-11 93.1 6.3 57 242-299 242-301 (453)
192 3sx6_A Sulfide-quinone reducta 98.4 4.5E-07 1.5E-11 91.7 7.2 98 202-302 5-116 (437)
193 1v0j_A UDP-galactopyranose mut 98.4 2.9E-07 9.9E-12 91.9 5.6 47 18-73 2-49 (399)
194 1yvv_A Amine oxidase, flavin-c 98.4 4.7E-06 1.6E-10 80.8 14.0 98 202-300 3-164 (336)
195 2xve_A Flavin-containing monoo 98.3 3.1E-06 1.1E-10 86.1 12.9 101 202-302 3-172 (464)
196 3cty_A Thioredoxin reductase; 98.3 4E-06 1.4E-10 80.7 13.0 99 202-302 17-130 (319)
197 4fk1_A Putative thioredoxin re 98.3 4.6E-06 1.6E-10 79.8 13.1 100 203-302 8-121 (304)
198 3r9u_A Thioredoxin reductase; 98.3 3.4E-06 1.2E-10 80.8 12.2 98 202-302 5-122 (315)
199 2i0z_A NAD(FAD)-utilizing dehy 98.3 5.2E-06 1.8E-10 84.1 14.0 98 202-299 27-192 (447)
200 1trb_A Thioredoxin reductase; 98.3 3.2E-06 1.1E-10 81.3 11.1 99 202-302 6-120 (320)
201 2weu_A Tryptophan 5-halogenase 98.3 4.8E-06 1.6E-10 85.9 13.0 32 23-54 2-36 (511)
202 3g5s_A Methylenetetrahydrofola 98.3 1.6E-06 5.5E-11 84.0 8.5 53 24-79 2-54 (443)
203 2a87_A TRXR, TR, thioredoxin r 98.3 4.8E-06 1.6E-10 80.8 11.8 100 201-302 14-130 (335)
204 2r0c_A REBC; flavin adenine di 98.3 6.4E-06 2.2E-10 85.6 13.3 32 23-54 26-57 (549)
205 3uox_A Otemo; baeyer-villiger 98.2 5.2E-06 1.8E-10 86.1 12.1 100 202-301 10-152 (545)
206 4a5l_A Thioredoxin reductase; 98.2 6.5E-06 2.2E-10 78.9 12.0 99 203-302 6-125 (314)
207 1q1r_A Putidaredoxin reductase 98.2 2.2E-06 7.6E-11 86.3 9.0 100 201-302 4-118 (431)
208 1hyu_A AHPF, alkyl hydroperoxi 98.2 5.6E-06 1.9E-10 85.5 11.9 101 201-301 212-329 (521)
209 3ihm_A Styrene monooxygenase A 98.2 1.1E-06 3.7E-11 88.7 6.3 55 23-83 22-76 (430)
210 3h8l_A NADH oxidase; membrane 98.2 1.5E-06 5E-11 87.1 7.1 98 202-302 2-117 (409)
211 3h28_A Sulfide-quinone reducta 98.2 7.7E-07 2.6E-11 89.7 4.7 97 202-301 3-112 (430)
212 3kd9_A Coenzyme A disulfide re 98.2 4.9E-06 1.7E-10 84.3 10.6 99 202-302 4-118 (449)
213 3ef6_A Toluene 1,2-dioxygenase 98.2 5.7E-06 2E-10 82.7 10.9 99 202-302 3-115 (410)
214 3hyw_A Sulfide-quinone reducta 98.2 5.5E-07 1.9E-11 90.8 3.0 98 201-301 2-112 (430)
215 3oc4_A Oxidoreductase, pyridin 98.2 3.1E-06 1.1E-10 85.9 8.3 101 202-302 3-119 (452)
216 1s3e_A Amine oxidase [flavin-c 98.2 1.3E-06 4.5E-11 90.4 5.6 53 242-297 215-267 (520)
217 3hdq_A UDP-galactopyranose mut 98.2 1.8E-06 6.2E-11 85.4 6.2 44 20-72 26-69 (397)
218 1xhc_A NADH oxidase /nitrite r 98.2 2.4E-06 8.1E-11 84.2 6.8 98 201-302 8-117 (367)
219 3fg2_P Putative rubredoxin red 98.1 2.9E-06 1E-10 84.7 7.5 98 202-302 2-114 (404)
220 2rgh_A Alpha-glycerophosphate 98.1 2.3E-05 8E-10 81.7 14.5 33 22-54 31-63 (571)
221 1lvl_A Dihydrolipoamide dehydr 98.1 4E-06 1.4E-10 85.2 8.3 100 24-181 172-272 (458)
222 2e1m_A L-glutamate oxidase; L- 98.1 2.1E-06 7.2E-11 84.2 5.7 43 21-72 42-85 (376)
223 2xdo_A TETX2 protein; tetracyc 98.1 1.2E-05 4.3E-10 79.9 11.4 101 201-301 26-185 (398)
224 1k0i_A P-hydroxybenzoate hydro 98.1 1.2E-05 4.2E-10 79.8 11.3 99 203-301 4-166 (394)
225 2eq6_A Pyruvate dehydrogenase 98.1 1.2E-05 4.2E-10 81.7 11.2 100 24-181 170-275 (464)
226 4hb9_A Similarities with proba 98.1 7.2E-06 2.4E-10 81.7 9.3 30 25-54 3-32 (412)
227 2yqu_A 2-oxoglutarate dehydrog 98.1 9.7E-06 3.3E-10 82.3 10.4 98 24-181 168-268 (455)
228 3s5w_A L-ornithine 5-monooxyge 98.1 8.8E-06 3E-10 82.8 9.9 99 203-301 32-195 (463)
229 2b9w_A Putative aminooxidase; 98.1 2.8E-06 9.5E-11 85.4 5.9 54 244-298 205-258 (424)
230 3ics_A Coenzyme A-disulfide re 98.1 6.9E-06 2.4E-10 86.3 9.0 102 201-302 36-156 (588)
231 3iwa_A FAD-dependent pyridine 98.1 8.4E-06 2.9E-10 83.2 9.3 101 202-302 4-129 (472)
232 3p1w_A Rabgdi protein; GDI RAB 98.1 2.9E-06 9.9E-11 85.7 5.7 56 242-297 256-313 (475)
233 3lxd_A FAD-dependent pyridine 98.1 6.4E-06 2.2E-10 82.5 8.3 99 202-302 10-123 (415)
234 3ihg_A RDME; flavoenzyme, anth 98.1 2.4E-05 8.1E-10 81.1 12.7 97 202-298 6-183 (535)
235 2vvm_A Monoamine oxidase N; FA 98.1 3E-06 1E-10 87.0 5.8 56 242-297 255-311 (495)
236 4gcm_A TRXR, thioredoxin reduc 98.1 2.8E-05 9.7E-10 74.4 12.2 98 203-302 8-120 (312)
237 3atr_A Conserved archaeal prot 98.1 2.7E-05 9.3E-10 78.9 12.7 99 202-300 7-164 (453)
238 3vrd_B FCCB subunit, flavocyto 98.1 3.2E-06 1.1E-10 84.3 5.6 99 201-302 2-112 (401)
239 1rsg_A FMS1 protein; FAD bindi 98.1 2.3E-06 8E-11 88.3 4.8 40 257-296 215-255 (516)
240 3ces_A MNMG, tRNA uridine 5-ca 98.1 2.5E-05 8.4E-10 81.5 12.3 98 202-300 29-183 (651)
241 3qj4_A Renalase; FAD/NAD(P)-bi 98.0 1.7E-05 5.9E-10 77.1 10.5 94 203-296 3-163 (342)
242 1sez_A Protoporphyrinogen oxid 98.0 3E-06 1E-10 87.3 5.2 43 20-71 10-52 (504)
243 1i8t_A UDP-galactopyranose mut 98.0 3.3E-06 1.1E-10 83.1 5.3 42 23-73 1-42 (367)
244 4hb9_A Similarities with proba 98.0 4.2E-05 1.4E-09 76.1 13.5 98 203-300 3-168 (412)
245 2yg5_A Putrescine oxidase; oxi 98.0 2.6E-06 9E-11 86.4 4.5 51 243-297 216-267 (453)
246 1w4x_A Phenylacetone monooxyge 98.0 3.8E-05 1.3E-09 79.7 13.3 96 202-297 17-153 (542)
247 2gqw_A Ferredoxin reductase; f 98.0 1.1E-05 3.6E-10 80.7 8.6 100 201-302 7-117 (408)
248 3ntd_A FAD-dependent pyridine 98.0 7.5E-06 2.6E-10 85.5 7.8 101 202-302 2-121 (565)
249 3nks_A Protoporphyrinogen oxid 98.0 3.7E-06 1.3E-10 85.9 5.1 55 242-297 234-289 (477)
250 1d5t_A Guanine nucleotide diss 98.0 5.2E-06 1.8E-10 83.7 6.0 58 242-299 234-291 (433)
251 2v3a_A Rubredoxin reductase; a 98.0 3.1E-05 1.1E-09 76.6 11.6 98 23-179 145-245 (384)
252 2zxi_A TRNA uridine 5-carboxym 98.0 5.1E-05 1.7E-09 78.8 13.3 98 202-300 28-182 (637)
253 1ebd_A E3BD, dihydrolipoamide 98.0 2E-05 6.7E-10 80.0 10.1 101 23-181 170-274 (455)
254 2jae_A L-amino acid oxidase; o 98.0 5.2E-06 1.8E-10 85.1 5.9 53 243-297 240-295 (489)
255 3fmw_A Oxygenase; mithramycin, 98.0 2.2E-05 7.4E-10 81.9 10.6 99 202-300 50-209 (570)
256 1c0p_A D-amino acid oxidase; a 98.0 5.3E-06 1.8E-10 81.5 5.6 35 20-54 3-37 (363)
257 3cp8_A TRNA uridine 5-carboxym 98.0 5.2E-05 1.8E-09 79.0 13.2 97 202-299 22-175 (641)
258 1nhp_A NADH peroxidase; oxidor 98.0 1.3E-05 4.4E-10 81.2 8.5 100 203-302 2-119 (447)
259 1ges_A Glutathione reductase; 98.0 1.6E-05 5.4E-10 80.5 9.1 97 24-180 168-268 (450)
260 1y0p_A Fumarate reductase flav 98.0 5.2E-05 1.8E-09 79.2 13.1 98 202-299 127-318 (571)
261 3i6d_A Protoporphyrinogen oxid 98.0 3E-06 1E-10 86.2 3.5 52 243-296 236-287 (470)
262 2qa2_A CABE, polyketide oxygen 98.0 6.8E-05 2.3E-09 76.9 13.6 98 202-299 13-167 (499)
263 2ivd_A PPO, PPOX, protoporphyr 98.0 5.4E-06 1.9E-10 84.7 5.3 53 242-297 238-293 (478)
264 2cdu_A NADPH oxidase; flavoenz 98.0 9.8E-06 3.3E-10 82.2 7.0 100 203-302 2-121 (452)
265 2qa1_A PGAE, polyketide oxygen 97.9 7.2E-05 2.5E-09 76.7 13.4 99 202-300 12-167 (500)
266 2r9z_A Glutathione amide reduc 97.9 3.4E-05 1.2E-09 78.4 10.9 98 24-180 167-267 (463)
267 1v59_A Dihydrolipoamide dehydr 97.9 3.1E-05 1.1E-09 79.0 10.7 99 24-180 184-290 (478)
268 2bc0_A NADH oxidase; flavoprot 97.9 8.3E-06 2.9E-10 83.6 6.3 101 202-302 36-153 (490)
269 3e1t_A Halogenase; flavoprotei 97.9 0.0001 3.6E-09 75.8 14.4 99 202-300 8-174 (512)
270 3cgb_A Pyridine nucleotide-dis 97.9 1.8E-05 6.2E-10 80.8 8.4 101 202-302 37-156 (480)
271 3c96_A Flavin-containing monoo 97.9 5.8E-05 2E-09 75.3 11.9 98 202-300 5-171 (410)
272 2vdc_G Glutamate synthase [NAD 97.9 6.2E-06 2.1E-10 83.5 4.8 89 201-298 122-219 (456)
273 3pl8_A Pyranose 2-oxidase; sub 97.9 7.3E-06 2.5E-10 86.3 5.3 58 254-311 272-337 (623)
274 1onf_A GR, grase, glutathione 97.9 4.2E-05 1.4E-09 78.5 10.8 98 24-180 177-278 (500)
275 3l8k_A Dihydrolipoyl dehydroge 97.9 5.8E-05 2E-09 76.7 11.6 97 203-302 6-148 (466)
276 2bi7_A UDP-galactopyranose mut 97.9 9.8E-06 3.3E-10 80.2 5.6 41 23-72 3-43 (384)
277 2a8x_A Dihydrolipoyl dehydroge 97.9 3E-05 1E-09 78.9 9.3 100 24-181 172-275 (464)
278 1qo8_A Flavocytochrome C3 fuma 97.9 7.1E-05 2.4E-09 78.1 12.2 98 202-299 122-313 (566)
279 4dsg_A UDP-galactopyranose mut 97.9 1.3E-05 4.3E-10 82.0 6.2 42 22-72 8-50 (484)
280 4eqs_A Coenzyme A disulfide re 97.9 2.1E-05 7.1E-10 79.3 7.5 100 203-302 2-120 (437)
281 3lov_A Protoporphyrinogen oxid 97.9 9.2E-06 3.1E-10 82.9 4.9 50 244-296 238-287 (475)
282 2qae_A Lipoamide, dihydrolipoy 97.8 4.8E-05 1.6E-09 77.4 9.7 99 24-180 175-279 (468)
283 1fec_A Trypanothione reductase 97.8 5.2E-05 1.8E-09 77.6 9.7 97 24-180 188-291 (490)
284 1dxl_A Dihydrolipoamide dehydr 97.8 6.9E-05 2.4E-09 76.3 10.6 98 202-302 7-155 (470)
285 1zk7_A HGII, reductase, mercur 97.8 0.00013 4.3E-09 74.2 12.5 99 201-302 4-154 (467)
286 2wpf_A Trypanothione reductase 97.8 5.5E-05 1.9E-09 77.5 9.8 97 24-180 192-295 (495)
287 2iid_A L-amino-acid oxidase; f 97.8 1.3E-05 4.4E-10 82.4 5.1 52 243-297 242-297 (498)
288 1d4d_A Flavocytochrome C fumar 97.8 0.00016 5.6E-09 75.4 13.5 98 202-299 127-318 (572)
289 2hqm_A GR, grase, glutathione 97.8 4.7E-05 1.6E-09 77.7 9.2 97 24-179 186-287 (479)
290 4g6h_A Rotenone-insensitive NA 97.8 2E-05 6.7E-10 80.9 6.3 100 202-302 43-173 (502)
291 1zmd_A Dihydrolipoyl dehydroge 97.8 5.8E-05 2E-09 76.9 9.8 98 202-302 7-156 (474)
292 2gmh_A Electron transfer flavo 97.8 0.00021 7.1E-09 74.7 13.7 99 202-300 36-219 (584)
293 1xdi_A RV3303C-LPDA; reductase 97.8 6E-05 2E-09 77.4 9.4 97 24-180 183-282 (499)
294 1mo9_A ORF3; nucleotide bindin 97.8 5.9E-05 2E-09 77.9 9.2 98 24-180 215-319 (523)
295 1ojt_A Surface protein; redox- 97.7 0.00016 5.4E-09 73.8 12.0 97 202-301 7-163 (482)
296 4b1b_A TRXR, thioredoxin reduc 97.7 9.5E-05 3.2E-09 76.3 10.3 96 24-180 224-322 (542)
297 3urh_A Dihydrolipoyl dehydroge 97.7 0.00016 5.6E-09 73.9 12.0 95 202-299 26-171 (491)
298 3ic9_A Dihydrolipoamide dehydr 97.7 8.9E-05 3.1E-09 75.9 9.6 99 24-181 175-278 (492)
299 1b37_A Protein (polyamine oxid 97.7 2.6E-05 8.9E-10 79.5 5.4 54 243-296 207-268 (472)
300 3c4n_A Uncharacterized protein 97.7 7.7E-05 2.6E-09 74.4 8.6 96 202-298 37-236 (405)
301 1y56_A Hypothetical protein PH 97.7 3.4E-05 1.1E-09 79.1 6.0 99 202-302 109-223 (493)
302 1m6i_A Programmed cell death p 97.7 3E-05 1E-09 79.4 5.4 97 202-300 12-146 (493)
303 3lad_A Dihydrolipoamide dehydr 97.7 0.00019 6.4E-09 73.2 11.1 99 24-180 181-283 (476)
304 1cjc_A Protein (adrenodoxin re 97.7 1.3E-05 4.6E-10 81.2 2.4 90 200-298 5-106 (460)
305 2qcu_A Aerobic glycerol-3-phos 97.6 0.00035 1.2E-08 71.6 12.9 56 244-299 151-211 (501)
306 3dk9_A Grase, GR, glutathione 97.6 0.0002 6.8E-09 73.0 10.8 99 24-180 188-296 (478)
307 3dgz_A Thioredoxin reductase 2 97.6 0.00032 1.1E-08 71.7 12.1 98 24-180 186-290 (488)
308 2aqj_A Tryptophan halogenase, 97.6 0.00066 2.3E-08 70.2 14.6 54 246-300 169-224 (538)
309 3o0h_A Glutathione reductase; 97.6 0.00016 5.5E-09 73.8 9.4 99 23-181 191-292 (484)
310 3jsk_A Cypbp37 protein; octame 97.6 0.00048 1.6E-08 66.2 11.8 158 202-359 80-331 (344)
311 2z3y_A Lysine-specific histone 97.6 6.5E-05 2.2E-09 79.8 6.2 40 256-295 410-455 (662)
312 3c4a_A Probable tryptophan hyd 97.5 5.4E-05 1.8E-09 74.8 4.8 31 24-54 1-33 (381)
313 2gjc_A Thiazole biosynthetic e 97.5 0.001 3.4E-08 63.6 13.3 157 202-359 66-321 (326)
314 3g3e_A D-amino-acid oxidase; F 97.5 4.6E-05 1.6E-09 74.3 4.0 47 241-299 141-187 (351)
315 3qfa_A Thioredoxin reductase 1 97.5 0.00095 3.3E-08 68.7 13.6 98 202-302 33-189 (519)
316 4dna_A Probable glutathione re 97.5 0.00027 9.2E-09 71.7 9.2 98 23-181 170-272 (463)
317 2xag_A Lysine-specific histone 97.5 0.00011 3.9E-09 79.5 6.3 34 21-54 276-309 (852)
318 3dgh_A TRXR-1, thioredoxin red 97.5 0.00069 2.4E-08 69.1 11.9 98 24-180 188-292 (483)
319 1gte_A Dihydropyrimidine dehyd 97.5 5.3E-05 1.8E-09 84.5 3.8 93 201-300 187-290 (1025)
320 1lqt_A FPRA; NADP+ derivative, 97.5 2.3E-05 8E-10 79.3 0.9 88 201-297 3-107 (456)
321 2r0c_A REBC; flavin adenine di 97.4 0.00042 1.4E-08 71.9 10.2 95 202-299 27-197 (549)
322 1pn0_A Phenol 2-monooxygenase; 97.4 7.4E-05 2.5E-09 79.3 4.5 32 23-54 8-44 (665)
323 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00017 5.7E-09 76.9 6.8 87 201-302 373-471 (671)
324 2x8g_A Thioredoxin glutathione 97.4 0.00078 2.7E-08 70.7 11.8 30 24-53 287-316 (598)
325 2gag_A Heterotetrameric sarcos 97.4 0.0004 1.4E-08 76.9 9.7 101 202-302 129-257 (965)
326 3t37_A Probable dehydrogenase; 97.4 0.00011 3.8E-09 75.8 4.6 33 23-55 17-50 (526)
327 2dkh_A 3-hydroxybenzoate hydro 97.4 0.001 3.5E-08 70.3 12.1 97 202-298 33-211 (639)
328 2e5v_A L-aspartate oxidase; ar 97.4 0.001 3.4E-08 67.6 11.5 97 203-300 1-178 (472)
329 4at0_A 3-ketosteroid-delta4-5a 97.3 0.0013 4.3E-08 67.6 12.3 56 243-298 203-264 (510)
330 3k30_A Histamine dehydrogenase 97.3 0.00098 3.4E-08 71.1 11.7 99 24-179 524-626 (690)
331 2weu_A Tryptophan 5-halogenase 97.3 0.0016 5.4E-08 66.9 12.6 53 247-300 178-232 (511)
332 1vg0_A RAB proteins geranylger 97.3 0.00026 8.7E-09 73.8 6.3 58 242-299 378-438 (650)
333 1kdg_A CDH, cellobiose dehydro 97.3 0.00019 6.4E-09 74.5 5.2 33 22-54 6-38 (546)
334 1ju2_A HydroxynitrIle lyase; f 97.3 0.00012 4E-09 75.8 3.4 33 21-54 24-56 (536)
335 3q9t_A Choline dehydrogenase a 97.2 0.00023 7.8E-09 74.0 4.8 33 22-54 5-38 (577)
336 2pyx_A Tryptophan halogenase; 97.1 0.0036 1.2E-07 64.5 13.2 53 247-300 180-235 (526)
337 3c4a_A Probable tryptophan hyd 97.1 0.00028 9.4E-09 69.7 3.8 86 203-299 2-144 (381)
338 3qvp_A Glucose oxidase; oxidor 97.0 0.00039 1.3E-08 72.2 4.6 35 22-56 18-53 (583)
339 1kf6_A Fumarate reductase flav 97.0 0.0038 1.3E-07 65.3 11.7 94 203-296 7-195 (602)
340 1coy_A Cholesterol oxidase; ox 97.0 0.00059 2E-08 70.0 5.3 35 21-55 9-43 (507)
341 1o94_A Tmadh, trimethylamine d 97.0 0.0027 9.2E-08 68.1 10.5 31 23-53 528-560 (729)
342 3fim_B ARYL-alcohol oxidase; A 96.9 0.00044 1.5E-08 71.7 3.6 34 23-56 2-36 (566)
343 3i6d_A Protoporphyrinogen oxid 96.9 0.004 1.4E-07 62.8 10.6 35 202-236 6-46 (470)
344 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00047 1.6E-08 72.8 3.5 32 23-54 56-95 (721)
345 1n4w_A CHOD, cholesterol oxida 96.8 0.00078 2.7E-08 69.1 4.4 34 22-55 4-37 (504)
346 2rgh_A Alpha-glycerophosphate 96.8 0.013 4.5E-07 60.8 13.5 51 248-298 194-250 (571)
347 1pn0_A Phenol 2-monooxygenase; 96.7 0.0093 3.2E-07 63.2 12.0 32 203-234 10-46 (665)
348 1gpe_A Protein (glucose oxidas 96.7 0.0018 6.1E-08 67.6 6.2 35 22-56 23-58 (587)
349 2wdq_A Succinate dehydrogenase 96.6 0.019 6.6E-07 59.8 13.7 32 203-234 9-40 (588)
350 2jbv_A Choline oxidase; alcoho 96.6 0.0014 4.8E-08 67.8 4.9 34 22-55 12-46 (546)
351 2h88_A Succinate dehydrogenase 96.4 0.033 1.1E-06 58.2 13.6 50 249-298 162-217 (621)
352 1chu_A Protein (L-aspartate ox 96.4 0.0085 2.9E-07 61.8 8.9 33 202-235 9-41 (540)
353 4b63_A L-ornithine N5 monooxyg 96.2 0.027 9.4E-07 57.4 11.5 100 203-302 41-218 (501)
354 2bs2_A Quinol-fumarate reducta 96.1 0.039 1.3E-06 58.2 12.1 50 249-298 165-220 (660)
355 3pl8_A Pyranose 2-oxidase; sub 95.9 0.016 5.6E-07 60.7 8.5 33 202-234 47-79 (623)
356 3kkj_A Amine oxidase, flavin-c 95.9 0.0073 2.5E-07 55.5 5.2 34 203-236 4-37 (336)
357 1jnr_A Adenylylsulfate reducta 95.3 0.086 2.9E-06 55.5 11.3 33 202-234 23-59 (643)
358 3eag_A UDP-N-acetylmuramate:L- 95.0 0.098 3.4E-06 50.0 9.9 30 24-53 5-35 (326)
359 2g1u_A Hypothetical protein TM 95.0 0.028 9.5E-07 47.3 5.1 32 23-54 19-50 (155)
360 4dgk_A Phytoene dehydrogenase; 94.8 0.019 6.5E-07 58.5 4.4 35 202-236 2-36 (501)
361 3fwz_A Inner membrane protein 94.7 0.041 1.4E-06 45.4 5.4 31 23-53 7-37 (140)
362 2vvm_A Monoamine oxidase N; FA 94.5 0.065 2.2E-06 54.4 7.6 41 23-72 39-79 (495)
363 3gyx_A Adenylylsulfate reducta 94.4 0.077 2.6E-06 55.9 8.0 33 202-234 23-61 (662)
364 3eag_A UDP-N-acetylmuramate:L- 94.4 0.055 1.9E-06 51.7 6.3 78 201-302 4-82 (326)
365 3oz2_A Digeranylgeranylglycero 94.3 0.041 1.4E-06 53.7 5.4 34 203-236 6-39 (397)
366 3p1w_A Rabgdi protein; GDI RAB 94.0 0.098 3.4E-06 52.6 7.4 50 15-73 12-61 (475)
367 3dfz_A SIRC, precorrin-2 dehyd 93.9 0.1 3.4E-06 46.7 6.5 75 200-299 30-104 (223)
368 3llv_A Exopolyphosphatase-rela 93.9 0.061 2.1E-06 44.2 4.8 30 24-53 7-36 (141)
369 1id1_A Putative potassium chan 93.7 0.073 2.5E-06 44.5 5.1 30 24-53 4-33 (153)
370 1lss_A TRK system potassium up 93.7 0.062 2.1E-06 43.9 4.4 30 24-53 5-34 (140)
371 2g1u_A Hypothetical protein TM 93.6 0.093 3.2E-06 44.0 5.5 35 200-234 18-52 (155)
372 3ic5_A Putative saccharopine d 93.4 0.073 2.5E-06 41.9 4.4 30 24-53 6-36 (118)
373 3lk7_A UDP-N-acetylmuramoylala 93.4 0.048 1.6E-06 54.8 3.9 80 201-302 9-88 (451)
374 1d5t_A Guanine nucleotide diss 93.4 0.097 3.3E-06 52.2 6.1 44 20-72 3-46 (433)
375 3ihm_A Styrene monooxygenase A 93.3 0.069 2.3E-06 53.2 4.8 35 200-234 21-55 (430)
376 3nrn_A Uncharacterized protein 93.2 0.086 3E-06 52.2 5.4 35 202-236 1-35 (421)
377 3rp8_A Flavoprotein monooxygen 93.1 0.093 3.2E-06 51.7 5.5 36 201-236 23-58 (407)
378 3nix_A Flavoprotein/dehydrogen 93.0 0.06 2E-06 53.3 4.0 33 202-234 6-38 (421)
379 2iid_A L-amino-acid oxidase; f 93.0 0.077 2.6E-06 53.9 4.7 38 200-237 32-69 (498)
380 3dme_A Conserved exported prot 92.8 0.11 3.8E-06 50.1 5.4 33 202-234 5-37 (369)
381 3ka7_A Oxidoreductase; structu 92.7 0.1 3.6E-06 51.6 5.3 34 203-236 2-35 (425)
382 3i3l_A Alkylhalidase CMLS; fla 92.7 0.1 3.6E-06 54.2 5.4 35 201-235 23-57 (591)
383 2oln_A NIKD protein; flavoprot 92.7 0.12 4E-06 50.7 5.5 33 203-235 6-38 (397)
384 3v76_A Flavoprotein; structura 92.5 0.12 4E-06 51.3 5.2 35 201-235 27-61 (417)
385 1ryi_A Glycine oxidase; flavop 92.5 0.11 3.9E-06 50.4 5.1 33 202-234 18-50 (382)
386 3k7m_X 6-hydroxy-L-nicotine ox 92.5 0.12 4E-06 51.3 5.3 33 203-235 3-35 (431)
387 4gde_A UDP-galactopyranose mut 92.5 0.1 3.6E-06 53.0 5.0 34 203-236 12-46 (513)
388 3cgv_A Geranylgeranyl reductas 92.3 0.13 4.6E-06 50.2 5.4 34 203-236 6-39 (397)
389 2uzz_A N-methyl-L-tryptophan o 92.3 0.098 3.4E-06 50.7 4.3 33 203-235 4-36 (372)
390 2gf3_A MSOX, monomeric sarcosi 92.2 0.13 4.5E-06 50.1 5.2 33 203-235 5-37 (389)
391 3c85_A Putative glutathione-re 92.1 0.14 4.9E-06 44.1 4.7 31 23-53 39-70 (183)
392 1c0p_A D-amino acid oxidase; a 92.1 0.15 5.1E-06 49.3 5.3 33 202-234 7-39 (363)
393 2b9w_A Putative aminooxidase; 92.1 0.15 5.2E-06 50.4 5.4 36 201-236 6-42 (424)
394 2e1m_A L-glutamate oxidase; L- 92.1 0.16 5.4E-06 49.5 5.4 35 201-235 44-79 (376)
395 3dfz_A SIRC, precorrin-2 dehyd 92.0 0.14 4.8E-06 45.8 4.6 31 23-53 31-61 (223)
396 2hmt_A YUAA protein; RCK, KTN, 92.0 0.13 4.6E-06 41.9 4.2 30 24-53 7-36 (144)
397 3g5s_A Methylenetetrahydrofola 91.9 0.16 5.6E-06 49.4 5.2 33 202-234 2-34 (443)
398 1y56_B Sarcosine oxidase; dehy 91.9 0.14 4.8E-06 49.8 4.9 33 202-234 6-38 (382)
399 2bcg_G Secretory pathway GDP d 91.8 0.3 1E-05 48.9 7.3 47 17-72 5-51 (453)
400 4hv4_A UDP-N-acetylmuramate--L 91.7 0.38 1.3E-05 48.8 7.9 31 23-53 22-53 (494)
401 4dio_A NAD(P) transhydrogenase 91.5 0.15 5E-06 49.9 4.4 30 24-53 191-220 (405)
402 3nks_A Protoporphyrinogen oxid 91.5 0.25 8.5E-06 49.7 6.4 40 24-72 3-44 (477)
403 1rsg_A FMS1 protein; FAD bindi 91.5 0.17 6E-06 51.6 5.2 35 202-236 9-44 (516)
404 2jae_A L-amino acid oxidase; o 91.4 0.19 6.6E-06 50.8 5.5 36 201-236 11-46 (489)
405 1kyq_A Met8P, siroheme biosynt 91.4 0.12 4.2E-06 47.7 3.6 32 23-54 13-44 (274)
406 4e12_A Diketoreductase; oxidor 91.2 0.2 6.8E-06 46.7 5.0 30 24-53 5-34 (283)
407 3nyc_A D-arginine dehydrogenas 91.2 0.17 5.6E-06 49.1 4.6 35 201-236 9-43 (381)
408 3fwz_A Inner membrane protein 91.2 0.26 8.9E-06 40.4 5.1 34 200-233 6-39 (140)
409 2bi7_A UDP-galactopyranose mut 90.9 0.23 7.9E-06 48.6 5.3 35 202-236 4-38 (384)
410 3dje_A Fructosyl amine: oxygen 90.9 0.23 7.7E-06 49.4 5.3 34 202-235 7-41 (438)
411 2ivd_A PPO, PPOX, protoporphyr 90.8 0.21 7.1E-06 50.3 5.0 36 201-236 16-51 (478)
412 2gag_B Heterotetrameric sarcos 90.8 0.18 6.2E-06 49.4 4.4 33 202-234 22-56 (405)
413 4hv4_A UDP-N-acetylmuramate--L 90.7 0.23 8E-06 50.3 5.2 76 200-302 21-97 (494)
414 2x5o_A UDP-N-acetylmuramoylala 90.7 0.14 4.8E-06 51.1 3.6 31 24-54 6-36 (439)
415 2yg5_A Putrescine oxidase; oxi 90.7 0.25 8.4E-06 49.4 5.4 35 202-236 6-40 (453)
416 2e4g_A Tryptophan halogenase; 90.6 0.16 5.6E-06 52.3 4.0 34 201-234 25-61 (550)
417 3hdq_A UDP-galactopyranose mut 90.5 0.28 9.4E-06 48.2 5.4 35 202-236 30-64 (397)
418 3lk7_A UDP-N-acetylmuramoylala 90.5 0.2 7E-06 50.1 4.5 31 23-53 9-39 (451)
419 3hn7_A UDP-N-acetylmuramate-L- 90.4 0.37 1.3E-05 49.3 6.4 82 196-302 14-96 (524)
420 3nlc_A Uncharacterized protein 90.4 0.15 5E-06 52.4 3.4 42 318-359 497-539 (549)
421 1b37_A Protein (polyamine oxid 90.4 0.32 1.1E-05 48.9 5.9 41 22-71 3-44 (472)
422 1sez_A Protoporphyrinogen oxid 90.3 0.26 9E-06 50.0 5.3 36 201-236 13-48 (504)
423 3pvc_A TRNA 5-methylaminomethy 90.2 0.28 9.4E-06 52.1 5.5 35 201-235 264-298 (689)
424 1id1_A Putative potassium chan 90.2 0.44 1.5E-05 39.6 5.7 33 201-233 3-35 (153)
425 3fpz_A Thiazole biosynthetic e 90.1 0.23 7.9E-06 47.2 4.4 63 202-264 66-138 (326)
426 3p2y_A Alanine dehydrogenase/p 90.0 0.2 6.8E-06 48.5 3.8 30 24-53 185-214 (381)
427 3g3e_A D-amino-acid oxidase; F 90.0 0.21 7.3E-06 47.9 4.1 32 203-234 2-39 (351)
428 3llv_A Exopolyphosphatase-rela 89.9 0.33 1.1E-05 39.6 4.6 32 202-233 7-38 (141)
429 3ps9_A TRNA 5-methylaminomethy 89.9 0.29 9.9E-06 51.8 5.3 33 202-234 273-305 (676)
430 3l4b_C TRKA K+ channel protien 89.8 0.25 8.5E-06 44.0 4.1 29 25-53 2-30 (218)
431 1v0j_A UDP-galactopyranose mut 89.7 0.26 8.9E-06 48.5 4.5 35 202-236 8-43 (399)
432 1f0y_A HCDH, L-3-hydroxyacyl-C 89.5 0.34 1.2E-05 45.5 5.0 30 24-53 16-45 (302)
433 2a9f_A Putative malic enzyme ( 89.4 0.26 8.9E-06 47.7 4.0 32 23-54 188-220 (398)
434 1s3e_A Amine oxidase [flavin-c 89.3 0.35 1.2E-05 49.3 5.3 43 21-72 2-44 (520)
435 1x13_A NAD(P) transhydrogenase 89.3 0.29 9.9E-06 48.1 4.4 30 24-53 173-202 (401)
436 1i8t_A UDP-galactopyranose mut 89.2 0.31 1.1E-05 47.3 4.6 33 203-235 3-35 (367)
437 3doj_A AT3G25530, dehydrogenas 89.0 0.44 1.5E-05 45.0 5.3 30 24-53 22-51 (310)
438 1bg6_A N-(1-D-carboxylethyl)-L 88.9 0.33 1.1E-05 46.7 4.6 30 24-53 5-34 (359)
439 1t2d_A LDH-P, L-lactate dehydr 88.9 0.39 1.3E-05 45.6 4.9 30 24-53 5-35 (322)
440 2x5o_A UDP-N-acetylmuramoylala 88.8 0.17 5.6E-06 50.6 2.3 75 201-301 5-79 (439)
441 3qha_A Putative oxidoreductase 88.7 0.4 1.4E-05 45.0 4.8 35 20-54 12-46 (296)
442 3ado_A Lambda-crystallin; L-gu 88.7 0.37 1.3E-05 45.5 4.5 30 24-53 7-36 (319)
443 2ewd_A Lactate dehydrogenase,; 88.6 0.34 1.2E-05 45.9 4.3 31 23-53 4-35 (317)
444 4ffl_A PYLC; amino acid, biosy 88.5 0.37 1.3E-05 46.6 4.6 31 24-54 2-32 (363)
445 3da1_A Glycerol-3-phosphate de 88.5 0.42 1.4E-05 49.3 5.2 34 201-234 18-51 (561)
446 1l7d_A Nicotinamide nucleotide 88.5 0.36 1.2E-05 47.2 4.4 31 23-53 172-202 (384)
447 1lss_A TRK system potassium up 88.5 0.58 2E-05 37.8 5.1 32 202-233 5-36 (140)
448 3axb_A Putative oxidoreductase 88.4 0.3 1E-05 48.7 3.9 31 202-232 24-55 (448)
449 3ic5_A Putative saccharopine d 88.2 0.47 1.6E-05 37.0 4.3 32 202-233 6-38 (118)
450 1pzg_A LDH, lactate dehydrogen 87.9 0.42 1.4E-05 45.6 4.4 30 24-53 10-40 (331)
451 1pjc_A Protein (L-alanine dehy 87.8 0.42 1.4E-05 46.3 4.4 30 24-53 168-197 (361)
452 4dsg_A UDP-galactopyranose mut 87.8 0.58 2E-05 47.3 5.6 36 201-236 9-45 (484)
453 2z3y_A Lysine-specific histone 87.7 0.52 1.8E-05 49.7 5.4 36 201-236 107-142 (662)
454 1vl6_A Malate oxidoreductase; 87.7 0.39 1.3E-05 46.4 4.0 32 23-54 192-224 (388)
455 3orq_A N5-carboxyaminoimidazol 87.5 0.64 2.2E-05 45.2 5.6 32 23-54 12-43 (377)
456 2xag_A Lysine-specific histone 87.5 0.55 1.9E-05 50.8 5.5 35 201-235 278-312 (852)
457 3i83_A 2-dehydropantoate 2-red 87.5 0.46 1.6E-05 45.1 4.5 30 24-53 3-32 (320)
458 2hmt_A YUAA protein; RCK, KTN, 87.3 0.62 2.1E-05 37.8 4.6 32 202-233 7-38 (144)
459 1lld_A L-lactate dehydrogenase 87.3 0.5 1.7E-05 44.7 4.6 30 24-53 8-39 (319)
460 3hn2_A 2-dehydropantoate 2-red 87.2 0.5 1.7E-05 44.6 4.5 30 24-53 3-32 (312)
461 1y6j_A L-lactate dehydrogenase 87.1 0.56 1.9E-05 44.5 4.7 30 24-53 8-39 (318)
462 1jw9_B Molybdopterin biosynthe 87.1 0.42 1.4E-05 43.5 3.7 31 24-54 32-63 (249)
463 3ghy_A Ketopantoate reductase 86.8 0.62 2.1E-05 44.5 5.0 30 24-53 4-33 (335)
464 3ado_A Lambda-crystallin; L-gu 86.7 0.33 1.1E-05 45.9 2.9 34 201-234 6-39 (319)
465 2raf_A Putative dinucleotide-b 86.7 0.78 2.7E-05 40.5 5.2 35 200-234 18-52 (209)
466 3phh_A Shikimate dehydrogenase 86.5 0.77 2.6E-05 42.2 5.2 32 23-54 118-149 (269)
467 3q2o_A Phosphoribosylaminoimid 86.5 0.69 2.3E-05 45.2 5.2 33 22-54 13-45 (389)
468 1pj5_A N,N-dimethylglycine oxi 86.3 0.59 2E-05 50.7 5.0 34 202-235 5-39 (830)
469 1vg0_A RAB proteins geranylger 86.3 2.2 7.7E-05 44.3 9.1 47 17-72 2-48 (650)
470 3lov_A Protoporphyrinogen oxid 86.3 0.77 2.6E-05 46.1 5.6 41 23-72 4-46 (475)
471 3gvi_A Malate dehydrogenase; N 86.2 0.65 2.2E-05 44.0 4.7 30 24-53 8-38 (324)
472 2ew2_A 2-dehydropantoate 2-red 86.2 0.6 2E-05 43.9 4.5 29 25-53 5-33 (316)
473 3k96_A Glycerol-3-phosphate de 86.1 0.67 2.3E-05 44.7 4.8 30 24-53 30-59 (356)
474 3tl2_A Malate dehydrogenase; c 86.0 0.78 2.7E-05 43.3 5.1 30 24-53 9-39 (315)
475 2y0c_A BCEC, UDP-glucose dehyd 85.9 0.62 2.1E-05 46.9 4.6 30 24-53 9-38 (478)
476 3k5i_A Phosphoribosyl-aminoimi 85.9 0.57 1.9E-05 46.1 4.2 36 18-53 19-54 (403)
477 2eez_A Alanine dehydrogenase; 85.8 0.62 2.1E-05 45.2 4.4 30 24-53 167-196 (369)
478 3l6d_A Putative oxidoreductase 85.7 0.93 3.2E-05 42.6 5.5 31 23-53 9-39 (306)
479 3oj0_A Glutr, glutamyl-tRNA re 85.7 0.32 1.1E-05 40.0 2.0 31 23-53 21-51 (144)
480 3dtt_A NADP oxidoreductase; st 85.7 0.73 2.5E-05 41.8 4.6 32 23-54 19-50 (245)
481 3hn7_A UDP-N-acetylmuramate-L- 85.6 2.5 8.5E-05 43.1 8.9 30 24-53 20-50 (524)
482 2vhw_A Alanine dehydrogenase; 85.5 0.66 2.2E-05 45.1 4.4 30 24-53 169-198 (377)
483 1kyq_A Met8P, siroheme biosynt 85.3 0.63 2.2E-05 42.9 3.9 35 200-234 12-46 (274)
484 2v6b_A L-LDH, L-lactate dehydr 85.2 0.74 2.5E-05 43.3 4.5 29 25-53 2-32 (304)
485 2hjr_A Malate dehydrogenase; m 85.1 0.8 2.7E-05 43.6 4.7 30 24-53 15-45 (328)
486 3gg2_A Sugar dehydrogenase, UD 85.1 0.73 2.5E-05 46.0 4.6 30 24-53 3-32 (450)
487 3l9w_A Glutathione-regulated p 84.9 0.81 2.8E-05 45.1 4.8 30 24-53 5-34 (413)
488 3c85_A Putative glutathione-re 84.8 0.92 3.2E-05 38.8 4.6 33 201-233 39-72 (183)
489 4g65_A TRK system potassium up 84.7 0.46 1.6E-05 47.6 3.0 31 24-54 4-34 (461)
490 1ks9_A KPA reductase;, 2-dehyd 84.7 0.96 3.3E-05 41.9 5.1 30 25-54 2-31 (291)
491 2raf_A Putative dinucleotide-b 84.7 0.87 3E-05 40.1 4.5 31 24-54 20-50 (209)
492 1pjq_A CYSG, siroheme synthase 84.7 0.69 2.3E-05 46.3 4.2 31 24-54 13-43 (457)
493 1nyt_A Shikimate 5-dehydrogena 84.7 0.89 3.1E-05 41.9 4.7 30 24-53 120-149 (271)
494 2dpo_A L-gulonate 3-dehydrogen 84.6 0.84 2.9E-05 43.2 4.6 30 24-53 7-36 (319)
495 2qrj_A Saccharopine dehydrogen 84.5 0.88 3E-05 44.1 4.7 31 23-53 214-248 (394)
496 1ez4_A Lactate dehydrogenase; 84.5 0.74 2.5E-05 43.6 4.2 34 20-53 2-37 (318)
497 3g0o_A 3-hydroxyisobutyrate de 84.4 0.86 3E-05 42.7 4.6 30 24-53 8-37 (303)
498 3rui_A Ubiquitin-like modifier 84.4 0.89 3E-05 43.2 4.6 32 23-54 34-66 (340)
499 4a7p_A UDP-glucose dehydrogena 84.0 1.1 3.6E-05 44.7 5.2 32 23-54 8-39 (446)
500 3vtf_A UDP-glucose 6-dehydroge 83.9 0.79 2.7E-05 45.4 4.2 31 23-53 21-51 (444)
No 1
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=7.1e-82 Score=652.91 Aligned_cols=456 Identities=33% Similarity=0.547 Sum_probs=383.1
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHh-hhhcCCc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELE-DARSYGW 100 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~-~~~~~g~ 100 (498)
.+|||+||||||||+.||.++++.|++|+|||+.... ....++.+||+|+|+||+|+|.|+.+++..+..+ ....||+
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~-~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi 119 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPS-SQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGW 119 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCC-TTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccc-cccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCc
Confidence 3699999999999999999999999999999942111 1112567999999999999999999998887765 5667888
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCC--CceEEEEcCeEEEcCCCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLD--GTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~--g~~~~~~~d~liiAtG~~p~ 178 (498)
... ...+||..++.+++..++++...+...+++.+|+++.|.+.+++++++.|...+ +..+.++++++|||||++|.
T Consensus 120 ~~~-~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~ 198 (542)
T 4b1b_A 120 KFD-NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPH 198 (542)
T ss_dssp EEE-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEEC
T ss_pred ccC-cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCC
Confidence 764 478999999999999999998888888999999999999999999999986542 34568999999999999999
Q ss_pred CCCCCCC--CcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCC
Q 042564 179 RAPIPGQ--ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRG 256 (498)
Q Consensus 179 ~p~i~g~--~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~G 256 (498)
.|+.++. +.++|++++++++++|++++|||||++|+|+|+.|+++|++||++.+ +++++.+|+++.+.+.+.|++.|
T Consensus 199 ~P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~g 277 (542)
T 4b1b_A 199 IPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQG 277 (542)
T ss_dssp CCSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTT
T ss_pred CCCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccccchhHHHHHHHHHHhhc
Confidence 9965444 34789999999999999999999999999999999999999999987 56788999999999999999999
Q ss_pred CEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCe-EcCCCCCCCCCCeEEec
Q 042564 257 INLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAV-KVDENSRTNVPSIWAVG 335 (498)
Q Consensus 257 v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i-~vd~~~~t~~~~iya~G 335 (498)
|.++++..+.++...++.+.+.+.+++.+.+|.|++|+|++||++.|+++..|+.++.++++ .+|+++|||+|||||+|
T Consensus 278 i~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiG 357 (542)
T 4b1b_A 278 VMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVG 357 (542)
T ss_dssp CEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECT
T ss_pred ceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEec
Confidence 99999999999999988899999999999999999999999999999999999999876654 78889999999999999
Q ss_pred ccCCC-CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCC-CEEEEEEecCCCcccc
Q 042564 336 DVTNR-MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKG-DILVFTSSFNPMRNTI 413 (498)
Q Consensus 336 D~~~~-~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~-~~~~~~~~~~~~~~~~ 413 (498)
||++. +++++.|.+||+++++|+++......+|..+|+++|++|++|+||+||+||+++++. ++.++...+.....+.
T Consensus 358 Dv~~~~p~La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~~~~~~~ 437 (542)
T 4b1b_A 358 DVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISA 437 (542)
T ss_dssp TSBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHCTTTEEEEEC---------
T ss_pred cccCCchhHHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCCCCcEEEEEeeccchhhhh
Confidence 99976 689999999999999999998877789999999999999999999999999987443 5555555544333221
Q ss_pred ---------------ccCCceeEEEEEE-ECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHH
Q 042564 414 ---------------SGRQEKTVMKLVV-DAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEF 477 (498)
Q Consensus 414 ---------------~~~~~~~~~kl~~-~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~ 477 (498)
....+.+|+|+++ ++++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|+|
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i~~HPTlsE~l 517 (542)
T 4b1b_A 438 VHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESF 517 (542)
T ss_dssp --------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC-----------
T ss_pred hhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccCCcCCCHHHHH
Confidence 1234678999985 567899999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 042564 478 VTM 480 (498)
Q Consensus 478 ~~~ 480 (498)
.++
T Consensus 518 ~~~ 520 (542)
T 4b1b_A 518 MNL 520 (542)
T ss_dssp ---
T ss_pred HHH
Confidence 986
No 2
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-75 Score=600.72 Aligned_cols=443 Identities=45% Similarity=0.798 Sum_probs=409.4
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+|||+||||||+|+++|+.|++.|++|+||| +..+||+|.++||+|++.++..+.....+.....|++..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liE----------k~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~ 74 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAE----------EFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTV 74 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEe----------CCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 5999999999999999999999999999999 677999999999999999999999998888899998875
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCC-CCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ-RAP 181 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~-~p~ 181 (498)
. ...++|..+..+.......+...+...+.+.+++++.+++.+++++.+.+. .++ ..+.||++|+|||+.|. .|+
T Consensus 75 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~-~~~--~~~~~d~lviAtG~~p~~~p~ 150 (463)
T 4dna_A 75 G-ESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLL-ASG--KTVTAERIVIAVGGHPSPHDA 150 (463)
T ss_dssp C-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEET-TTT--EEEEEEEEEECCCEEECCCTT
T ss_pred C-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEe-cCC--eEEEeCEEEEecCCCcccCCC
Confidence 4 357899999999998888888888888888899999999999988776653 344 38999999999999999 999
Q ss_pred CCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEc
Q 042564 182 IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHP 261 (498)
Q Consensus 182 i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~ 261 (498)
+||.+.++++++++.+...+++++|||+|++|+|+|..+.++|.+|+++++.+.+++.+++++.+.+.+.+++.||++++
T Consensus 151 i~G~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~ 230 (463)
T 4dna_A 151 LPGHELCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILC 230 (463)
T ss_dssp STTGGGCBCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCccccccHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEC
Confidence 99998889999999998899999999999999999999999999999999999999989999999999999999999999
Q ss_pred CccEEEEEEeCCe-EEEE-ECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecccCC
Q 042564 262 RTTIKELIKSEEG-VKVI-TDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTN 339 (498)
Q Consensus 262 ~~~v~~i~~~~~~-~~v~-~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~~ 339 (498)
++.|.++..++++ +.+. +.+|+ +++|.||+|+|++|+.++++++..|++++++|+|.||+++||++|+|||+|||++
T Consensus 231 ~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~ 309 (463)
T 4dna_A 231 EDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTD 309 (463)
T ss_dssp SCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGGS
T ss_pred CCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEecCC
Confidence 9999999887555 6788 88888 9999999999999999988788899999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCccccccCCce
Q 042564 340 RMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEK 419 (498)
Q Consensus 340 ~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (498)
.+++++.|..||+++|+||++......++..+|+++|++|+++++|+||+||+++| .++.++...|....+++....+.
T Consensus 310 ~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 388 (463)
T 4dna_A 310 RVQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKF-QEIEVYRAEFRPMKATLSGRKEK 388 (463)
T ss_dssp SCCCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHHS-SEEEEEEEEECCTTHHHHCCCCC
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHcC-CCeEEEEEeccccchhhcCCCce
Confidence 99999999999999999999876666788899999999999999999999999985 46788888888888777677789
Q ss_pred eEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 420 TVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 420 ~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|++.+++
T Consensus 389 ~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 450 (463)
T 4dna_A 389 TIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTMY 450 (463)
T ss_dssp EEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGGTCCC
T ss_pred EEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999988765
No 3
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=3.3e-75 Score=602.35 Aligned_cols=445 Identities=40% Similarity=0.675 Sum_probs=404.7
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
.+|||+||||||||+++|+.|++.|++|+||| +..+||+|.++||+|++.++..+.....+.....|++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE----------~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~ 88 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFP 88 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEe----------cCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 46899999999999999999999999999999 66889999999999999999999888888888888876
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC-
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRA- 180 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p- 180 (498)
.. ...++|..+..+.......+...+...+.+.+++++.+++.+++++.+.+.. +++ +++||+||||||++|..|
T Consensus 89 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~-~g~--~~~~d~lviAtG~~p~~p~ 164 (478)
T 3dk9_A 89 SC-EGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEV-SGK--KYTAPHILIATGGMPSTPH 164 (478)
T ss_dssp CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEE-TTE--EEECSCEEECCCEEECCCC
T ss_pred CC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEE-CCE--EEEeeEEEEccCCCCCCCC
Confidence 54 3678999999999998888888888888889999999999998887766664 443 799999999999999999
Q ss_pred --CCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCE
Q 042564 181 --PIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN 258 (498)
Q Consensus 181 --~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 258 (498)
++||.+.++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.+++.||+
T Consensus 165 ~~~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~ 244 (478)
T 3dk9_A 165 ESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVE 244 (478)
T ss_dssp TTTSTTGGGSBCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCE
T ss_pred cCCCCCCceeEchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCE
Confidence 999988888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCccEEEEEEeCCe--EEEEECC-------CeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCC
Q 042564 259 LHPRTTIKELIKSEEG--VKVITDH-------GEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVP 329 (498)
Q Consensus 259 i~~~~~v~~i~~~~~~--~~v~~~~-------g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~ 329 (498)
+++++.|.++..++++ +.+.+.+ |+++++|.||+|+|++|+.+.+.++..|++++++|+|.||++++|++|
T Consensus 245 i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~ 324 (478)
T 3dk9_A 245 VLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVK 324 (478)
T ss_dssp EETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSST
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCC
Confidence 9999999999876555 5666664 267999999999999999997778889999999999999999999999
Q ss_pred CeEEecccCCCCCChHHHHHHHHHHHHHHhCC-CCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCC-CCEEEEEEecC
Q 042564 330 SIWAVGDVTNRMNLTPVALMEGTCFAKTVFGG-QPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGK-GDILVFTSSFN 407 (498)
Q Consensus 330 ~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~-~~~~~~~~~~~ 407 (498)
||||+|||++.+.+++.|..||+++|+||++. .....++..+|+++|++|++++||+||+||++++. .++.++...+.
T Consensus 325 ~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~ 404 (478)
T 3dk9_A 325 GIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFT 404 (478)
T ss_dssp TEEECGGGGCSSCCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEEC
T ss_pred CEEEEEecCCCCccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEeeCCHHHHHhhCCCccEEEEEeecC
Confidence 99999999988999999999999999999986 34556888999999999999999999999998743 26778888888
Q ss_pred CCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHH
Q 042564 408 PMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTM 480 (498)
Q Consensus 408 ~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~ 480 (498)
+..++...+.+.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|+|.++
T Consensus 405 ~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 477 (478)
T 3dk9_A 405 PMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTL 477 (478)
T ss_dssp CGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGSC
T ss_pred cchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHhc
Confidence 8888776677889999999999999999999999999999999999999999999999999999999987643
No 4
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=8.4e-75 Score=599.85 Aligned_cols=457 Identities=37% Similarity=0.610 Sum_probs=402.1
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
.+|||+||||||||++||++|++.|++|+|||+............+||+|+++||+|+|.++..+.....+.....||+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 46999999999999999999999999999999421111112234589999999999999999999988888888899988
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
......++|..+..+....++.+...+...+...+++++.+.+.+++++.+.|.+.+|. ..++||+||||||++|..|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~-~~~~~d~lviATGs~p~~p~ 166 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGE-RTITAQTFVIAVGGRPRYPD 166 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCC-EEEEEEEEEECCCEEECCCS
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCe-EEEEcCEEEEeCCCCcCCCC
Confidence 76556889999999999888888877777888899999999999999999999887764 57999999999999999999
Q ss_pred CCCC-CcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEE
Q 042564 182 IPGQ-ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260 (498)
Q Consensus 182 i~g~-~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 260 (498)
+||. +..+++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++ +.+++.+++++.+.+.+.+++.||+++
T Consensus 167 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~ 245 (483)
T 3dgh_A 167 IPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFL 245 (483)
T ss_dssp STTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEE
Confidence 9998 44678899998888899999999999999999999999999999998 467888999999999999999999999
Q ss_pred cCccEEEEEEeCCe-EEEEECCCe-----EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEe
Q 042564 261 PRTTIKELIKSEEG-VKVITDHGE-----EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAV 334 (498)
Q Consensus 261 ~~~~v~~i~~~~~~-~~v~~~~g~-----~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~ 334 (498)
+++.|.++..++++ +.+++.+++ ++++|.|++|+|++|+++++.++..|+++++ |+|.||++++|++|+|||+
T Consensus 246 ~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t~~~~IyA~ 324 (483)
T 3dgh_A 246 RKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEATNVANIYAV 324 (483)
T ss_dssp ETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBCSSTTEEEC
T ss_pred eCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCccCCCCEEEE
Confidence 99999999875543 666665543 7999999999999999998777899999998 9999999999999999999
Q ss_pred cccC-CCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHc-CCCCEEEEEEecCCCccc
Q 042564 335 GDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNT 412 (498)
Q Consensus 335 GD~~-~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~-~~~~~~~~~~~~~~~~~~ 412 (498)
|||+ +.+.+++.|.+||+++|+||++......++..+|+++|++|++++||+||+||+++ +...+.++...+.+..++
T Consensus 325 GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~ 404 (483)
T 3dgh_A 325 GDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFF 404 (483)
T ss_dssp STTBTTSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCGGGT
T ss_pred EcccCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEECCCccEEEeCCHHHHHhhCCCCCEEEEEEeecchhhh
Confidence 9998 56889999999999999999987666678889999999999999999999999986 223577777667665544
Q ss_pred ccc-CCceeEEEEEEECC-CCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 413 ISG-RQEKTVMKLVVDAE-TEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 413 ~~~-~~~~~~~kl~~~~~-~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
... ..+.+|+|+++|++ +++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|++.+++
T Consensus 405 ~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (483)
T 3dgh_A 405 IPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLA 475 (483)
T ss_dssp TTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGGCC
T ss_pred hhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHH
Confidence 322 34678999999986 8999999999999999999999999999999999999999999999988754
No 5
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.1e-74 Score=602.63 Aligned_cols=460 Identities=37% Similarity=0.668 Sum_probs=401.7
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
|+.+|||+||||||||++||+.|++.|++|+|||+.... .......+||+|.++||+|+|.++..+.....+.....||
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~-~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g 107 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPT-PLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYG 107 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCC-TTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCcc-ccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcC
Confidence 345799999999999999999999999999999941110 0011237899999999999999999998888888899999
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
+.......++|..+..+.+...+.+...+...++..+|+++.+.+.+++++.+.|...+|+..+++||+||||||++|+.
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 88765568999999999998888888888888888999999999999999999998877765689999999999999999
Q ss_pred CCCCCCC-cccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCE
Q 042564 180 APIPGQE-LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN 258 (498)
Q Consensus 180 p~i~g~~-~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 258 (498)
|++||.+ .++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++. .+++.+|+++.+.+.+.+++.||+
T Consensus 188 p~i~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV~ 266 (519)
T 3qfa_A 188 LGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIK 266 (519)
T ss_dssp CCCTTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCCCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cccccCCHHHHHHHHHHHHHCCCE
Confidence 9999964 46788999998888999999999999999999999999999999984 678889999999999999999999
Q ss_pred EEcCccEEEEEEeC----CeEEEE--ECCC-e--EEEcCEEEEecCCCcCCCCCCcccCCceeC-CCCCeEcCCCCCCCC
Q 042564 259 LHPRTTIKELIKSE----EGVKVI--TDHG-E--EIVADVVLFATGRAPNTKRLNLKAVGVEVD-QTGAVKVDENSRTNV 328 (498)
Q Consensus 259 i~~~~~v~~i~~~~----~~~~v~--~~~g-~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~-~~g~i~vd~~~~t~~ 328 (498)
+++++.+.++...+ +.+.+. ..+| + .+++|.|++|+|++||++.+.++..|++++ ++|+|.||+++||++
T Consensus 267 v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~Ts~ 346 (519)
T 3qfa_A 267 FIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNV 346 (519)
T ss_dssp EEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBCSS
T ss_pred EEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCccCC
Confidence 99998888886543 334443 4455 2 578999999999999999887888999998 679999999999999
Q ss_pred CCeEEecccC-CCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCC-CCEEEEEEec
Q 042564 329 PSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGK-GDILVFTSSF 406 (498)
Q Consensus 329 ~~iya~GD~~-~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~-~~~~~~~~~~ 406 (498)
|||||+|||+ +.+.+++.|..||+++|+||++......++..+|+++|++|++++||+||+||++++. ..+.++...|
T Consensus 347 ~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~ 426 (519)
T 3qfa_A 347 PYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 426 (519)
T ss_dssp TTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEEEEE
T ss_pred CCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCCCEEEEEEec
Confidence 9999999998 6688999999999999999998776777889999999999999999999999998621 2577777777
Q ss_pred CCCccccccC-CceeEEEEEEEC-CCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 407 NPMRNTISGR-QEKTVMKLVVDA-ETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 407 ~~~~~~~~~~-~~~~~~kl~~~~-~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
.+..++.... .+.+|+|+++|+ ++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|++.+++
T Consensus 427 ~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~~ 503 (519)
T 3qfa_A 427 WPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTLS 503 (519)
T ss_dssp CCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCTTCGGGGGGGCC
T ss_pred cchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHH
Confidence 6655554332 467999999997 58999999999999999999999999999999999999999999999988765
No 6
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=5.9e-75 Score=601.19 Aligned_cols=459 Identities=40% Similarity=0.704 Sum_probs=409.8
Q ss_pred CCCCccEEEECCChhHHHHHHHHHh-CCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcC
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSAN-FGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSY 98 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 98 (498)
|+.+|||+||||||||+++|++|++ .|++|+|||++. .+..+.+..+||+|.++||+|+|.++..+.+...+.....|
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~-~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~ 82 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQT-SHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGF 82 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCS-SSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEeccc-ccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhc
Confidence 5556999999999999999999999 999999999321 11222356789999999999999999999888888888888
Q ss_pred Cccccccc--ccCHHHHHHHHHHHHHHHhHHHHHHHHhC-CcEEEEeEEEEEeCCEEEEEeCCC----ceEEEEcCeEEE
Q 042564 99 GWEVHEKI--DFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQLDG----TKLSYSAKHILI 171 (498)
Q Consensus 99 g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~~~~i~~~~~~v~~~~g----~~~~~~~d~lii 171 (498)
++... .+ .++|..+..+....+.++...+...+++. +++++.+++.+++++.+.+...++ ....++||+|||
T Consensus 83 g~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lVi 161 (495)
T 2wpf_A 83 GWEFD-GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILL 161 (495)
T ss_dssp TEECC-GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEE
T ss_pred CcccC-CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEE
Confidence 88654 34 68999999999998888888888888888 999999999999998887753111 024799999999
Q ss_pred cCCCCCCCCCCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHC---CCcEEEEeeCCCCCCCCCHHHHHHH
Q 042564 172 ATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGM---GSTVDLLFRKELPLRGFDDEMRAVV 248 (498)
Q Consensus 172 AtG~~p~~p~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~---g~~V~lv~~~~~~l~~~~~~~~~~l 248 (498)
|||++|+.|++||.+.++++++++.+...+++++|||+|++|+|+|..|.++ |.+|+++++.+.+++.+++++.+.+
T Consensus 162 ATGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l 241 (495)
T 2wpf_A 162 ATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEV 241 (495)
T ss_dssp CCCEEECCCCCTTGGGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHH
T ss_pred eCCCCcCCCCCCCccccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHH
Confidence 9999999999999887888999988888899999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhCCCEEEcCccEEEEEEeCC-eEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCC
Q 042564 249 ARNLEGRGINLHPRTTIKELIKSEE-GVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTN 327 (498)
Q Consensus 249 ~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~ 327 (498)
.+.+++.||++++++.|.++..+++ .+.+++.+|+++++|.||+|+|++||++.+.++++|++++++|+|.||+++||+
T Consensus 242 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~ 321 (495)
T 2wpf_A 242 TKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTN 321 (495)
T ss_dssp HHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBCS
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCccC
Confidence 9999999999999999999987654 377888899899999999999999999876678899999988999999999999
Q ss_pred CCCeEEecccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecC
Q 042564 328 VPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFN 407 (498)
Q Consensus 328 ~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~ 407 (498)
+|+|||+|||++.+++++.|.+||+++|+||++......+|..+|+++|++|++++||++|++|+++ +..+.+....|.
T Consensus 322 ~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~~~~~v~~~~~~ 400 (495)
T 2wpf_A 322 VPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKE-FEKVAVYMSSFT 400 (495)
T ss_dssp STTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEEEECCSSCEEEEECCHHHHHHH-SSEEEEEEEEEC
T ss_pred CCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhc-CCCEEEEEEecC
Confidence 9999999999998889999999999999999986656678889999999999999999999999987 456778888888
Q ss_pred CCccccccCCceeE-EEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 408 PMRNTISGRQEKTV-MKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 408 ~~~~~~~~~~~~~~-~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
+..+++....+.+| +|+++++++++|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|++.+++
T Consensus 401 ~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (495)
T 2wpf_A 401 PLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMR 475 (495)
T ss_dssp CTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCC
T ss_pred chhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHH
Confidence 87777766678899 999999999999999999999999999999999999999999999999999999987654
No 7
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.7e-74 Score=596.23 Aligned_cols=449 Identities=30% Similarity=0.493 Sum_probs=403.2
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhh-hhcC
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELED-ARSY 98 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~-~~~~ 98 (498)
++++|||+||||||||++||+.|++.|++|+|||+ ...+||+|.+.||+|++.++..+........ +..+
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk---------~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~ 92 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEK---------RSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEAL 92 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGG
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEec---------CCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhc
Confidence 33469999999999999999999999999999995 4679999999999999999999888776655 5778
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCC
Q 042564 99 GWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~ 178 (498)
|+... ...++|..+..+.......+...+...+.+.+++++.+.+.+++++.+.|.+.+|+...+.||+||||||++|.
T Consensus 93 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~ 171 (491)
T 3urh_A 93 GVEVA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVA 171 (491)
T ss_dssp TEECC-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECC
T ss_pred CcccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCC
Confidence 87654 46789999999999888888888888889999999999999999999999887776668999999999999863
Q ss_pred CCCCCCCC------cccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHH
Q 042564 179 RAPIPGQE------LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNL 252 (498)
Q Consensus 179 ~p~i~g~~------~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l 252 (498)
.+||.+ .++++++...+...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++.+++++.+.+.+.+
T Consensus 172 --~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l 249 (491)
T 3urh_A 172 --GIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRML 249 (491)
T ss_dssp --CBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHH
T ss_pred --CCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHH
Confidence 455543 367888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEcCccEEEEEEeCCeEEEEECC---C--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCC
Q 042564 253 EGRGINLHPRTTIKELIKSEEGVKVITDH---G--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTN 327 (498)
Q Consensus 253 ~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~---g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~ 327 (498)
++.||++++++.|.++..+++.+.+.+.+ | +++++|.||+|+|++|+.++++++..|++++++|+|.||+++||+
T Consensus 250 ~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~ 329 (491)
T 3urh_A 250 TKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTS 329 (491)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCS
T ss_pred HhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCC
Confidence 99999999999999999888777676652 4 579999999999999999988788899999999999999999999
Q ss_pred CCCeEEecccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecC
Q 042564 328 VPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFN 407 (498)
Q Consensus 328 ~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~ 407 (498)
+|+|||+|||++.+++++.|..||+++|++|++.. ...++..+|+++|++|++++||+||+||+++|+ ++.+....+.
T Consensus 330 ~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~-~~~~~~~~~~ 407 (491)
T 3urh_A 330 IAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQA-GHVNYDVIPGVVYTQPEVASVGKTEEELKAAGV-AYKIGKFPFT 407 (491)
T ss_dssp STTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSC-CCCCTTCCCEEECSSSCEEEEECCHHHHHHTTC-CEEEEEEEGG
T ss_pred CCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCC-cccCCCCCCEEEEccCCeEEEeCCHHHHHhCCC-CEEEEEEecC
Confidence 99999999999989999999999999999999854 456788899999999999999999999999865 7888888888
Q ss_pred CCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 408 PMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 408 ~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
...++...+.+.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.+++++|||++|++.++..
T Consensus 408 ~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 482 (491)
T 3urh_A 408 ANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAAL 482 (491)
T ss_dssp GCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHH
T ss_pred cchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHH
Confidence 777776667788999999999999999999999999999999999999999999999999999999999988654
No 8
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-74 Score=596.65 Aligned_cols=452 Identities=38% Similarity=0.647 Sum_probs=401.6
Q ss_pred cccCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhh
Q 042564 17 EEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDAR 96 (498)
Q Consensus 17 ~~~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~ 96 (498)
|..|+.+|||+|||||+||+++|++|++.|.+|+||| +..+||+|.+.||+|+|.++..+.....+....
T Consensus 5 m~~~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE----------~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~ 74 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSGGVASARRAASYGAKTLLVE----------AKALGGTCVNVGCVPKKVMWYASDLATRVSHAN 74 (479)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTT
T ss_pred ccCccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEe----------CCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHH
Confidence 4444457999999999999999999999999999999 456899999999999999999888777777677
Q ss_pred cCCcccc----c-ccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEE
Q 042564 97 SYGWEVH----E-KIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILI 171 (498)
Q Consensus 97 ~~g~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~lii 171 (498)
.|++... . ...++|..+..+.......+...+...+++.+++++.+++.+++++.+.+.+.+|+...+.||+||+
T Consensus 75 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lvi 154 (479)
T 2hqm_A 75 EYGLYQNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILV 154 (479)
T ss_dssp TTTBSTTSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEE
T ss_pred hcCcccccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEE
Confidence 7776541 1 3568999999888888888888888888889999999998889988888887666545799999999
Q ss_pred cCCCCCCCC-CCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHH
Q 042564 172 ATGSRAQRA-PIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR 250 (498)
Q Consensus 172 AtG~~p~~p-~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~ 250 (498)
|||++|..| ++||.+.++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++.+++++.+.+.+
T Consensus 155 AtGs~p~~p~~i~g~~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~ 234 (479)
T 2hqm_A 155 ATGGKAIFPENIPGFELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITD 234 (479)
T ss_dssp CCCEEECCCTTSTTGGGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHH
T ss_pred cCCCCCCCCCCCCCcccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHH
Confidence 999999999 8999887888999998888899999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEcCccEEEEEEeCCe--EEEEECCC-eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCC
Q 042564 251 NLEGRGINLHPRTTIKELIKSEEG--VKVITDHG-EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTN 327 (498)
Q Consensus 251 ~l~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~ 327 (498)
.+++.||++++++.|.++..++++ +.+.+++| +++++|.||+|+|++||+ .+.++..|++++++|+|.||++++|+
T Consensus 235 ~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd~~~~t~ 313 (479)
T 2hqm_A 235 HYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIADEYQNTN 313 (479)
T ss_dssp HHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCCTTCBCS
T ss_pred HHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeECCCCccC
Confidence 999999999999999999876544 77888899 789999999999999999 44468889999999999999999999
Q ss_pred CCCeEEecccCCCCCChHHHHHHHHHHHHHHhCCC---CCCCCCCCCcEEEeccCCeeEeeCCHHHHHHc-CCCCEEEEE
Q 042564 328 VPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQ---PCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFT 403 (498)
Q Consensus 328 ~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~-~~~~~~~~~ 403 (498)
.|+|||+|||++.+.+++.|.+||+++|+||++.. +...+|..+|+++|++|+++++|++|++|+.+ +..++.+..
T Consensus 314 ~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~~~~~~~~ 393 (479)
T 2hqm_A 314 VPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYN 393 (479)
T ss_dssp STTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEE
T ss_pred CCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcCCCCcEEEEE
Confidence 99999999999888899999999999999999865 44567788999999999999999999999887 223488888
Q ss_pred EecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHH
Q 042564 404 SSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVT 479 (498)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~ 479 (498)
..+....++.....+.+|+|+++++++++|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|++.+
T Consensus 394 ~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 469 (479)
T 2hqm_A 394 SKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVT 469 (479)
T ss_dssp EEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGS
T ss_pred EeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHHHHH
Confidence 8888888876566778999999999999999999999999999999999999999999999999999999998765
No 9
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=9.9e-75 Score=599.79 Aligned_cols=458 Identities=35% Similarity=0.621 Sum_probs=402.9
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
.+|||+||||||||++||..|++.|++|+||||.... .......+||+|+++||+|+|.++..+.....+.....||+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~-~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 83 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPS-PRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWE 83 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCC-TTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccc-cccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcc
Confidence 4599999999999999999999999999999941111 011135689999999999999999999988888889999987
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
......++|..+..+.......+...+...+.+.+++++.+.+.+++++.+.|.+.+|+..+++||+||||||++|..|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~ 163 (488)
T 3dgz_A 84 VAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPT 163 (488)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCS
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCC
Confidence 76557899999999999888888888888888899999999999999999999887776568999999999999999998
Q ss_pred -CCCC-CcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEE
Q 042564 182 -IPGQ-ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINL 259 (498)
Q Consensus 182 -i~g~-~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 259 (498)
+||. +..+++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++. .+++.+|+++.+.+.+.+++.||++
T Consensus 164 ~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~ 242 (488)
T 3dgz_A 164 QVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQF 242 (488)
T ss_dssp SCBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCEE
Confidence 9997 446788999998889999999999999999999999999999999986 4678899999999999999999999
Q ss_pred EcCccEEEEEEeCC-eEEEEECC---Ce--EEEcCEEEEecCCCcCCCCCCcccCCceeC-CCCCeEcCCCCCCCCCCeE
Q 042564 260 HPRTTIKELIKSEE-GVKVITDH---GE--EIVADVVLFATGRAPNTKRLNLKAVGVEVD-QTGAVKVDENSRTNVPSIW 332 (498)
Q Consensus 260 ~~~~~v~~i~~~~~-~~~v~~~~---g~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~-~~g~i~vd~~~~t~~~~iy 332 (498)
++++.+.++...++ .+.+++.+ |+ ++++|.|++|+|++|+++++.++..|++++ ++|+|.||+++||++||||
T Consensus 243 ~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~Iy 322 (488)
T 3dgz_A 243 LKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIY 322 (488)
T ss_dssp EETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEE
T ss_pred EeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCCCEE
Confidence 99999999987443 45565543 55 478999999999999999887888999999 7899999999999999999
Q ss_pred EecccC-CCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHc-CCCCEEEEEEecCCCc
Q 042564 333 AVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMR 410 (498)
Q Consensus 333 a~GD~~-~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~-~~~~~~~~~~~~~~~~ 410 (498)
|+|||+ +.+.+++.|.+||+++|+||++......++..+|+++|++|++++||+||+||+++ +...+.++...|.+..
T Consensus 323 A~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~ 402 (488)
T 3dgz_A 323 AIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLE 402 (488)
T ss_dssp ECGGGBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCHH
T ss_pred EeEEecCCCCcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcEEEEEccccchh
Confidence 999998 56889999999999999999987766678889999999999999999999999976 2235777776676655
Q ss_pred cccccC-CceeEEEEEEE-CCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 411 NTISGR-QEKTVMKLVVD-AETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 411 ~~~~~~-~~~~~~kl~~~-~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
++.... .+.+|+|+++| +++++|||+|++|++|.|+|+.+++||++++|++||.+++|+|||++|++.+++
T Consensus 403 ~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (488)
T 3dgz_A 403 FTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLH 475 (488)
T ss_dssp HHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSTHHHHTCC
T ss_pred hhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHH
Confidence 543332 36799999999 589999999999999999999999999999999999999999999999998763
No 10
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=6e-75 Score=600.85 Aligned_cols=451 Identities=44% Similarity=0.768 Sum_probs=408.8
Q ss_pred cccCC-CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhh
Q 042564 17 EEQTH-FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDA 95 (498)
Q Consensus 17 ~~~~~-~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~ 95 (498)
+..|+ .+|||+|||||++|+++|+.|++.|++|+||| +..+||+|.++||+|++.++..+.....+...
T Consensus 19 ~~~M~~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liE----------k~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~ 88 (484)
T 3o0h_A 19 PGSMGSFDFDLFVIGSGSGGVRAARLAGALGKRVAIAE----------EYRIGGTCVIRGCVPKKLYFYASQYAQEFSKS 88 (484)
T ss_dssp -----CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEe----------CCCCCCceeccCccccHHHHHHHHHHHHHHHH
Confidence 33444 46999999999999999999999999999999 66789999999999999999999999988888
Q ss_pred hcCCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCC
Q 042564 96 RSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGS 175 (498)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~ 175 (498)
..|++... ...++|..+..+.......+...+...+.+.+++++.+.+.+++++.+.+. .++. .+.||++|+|||+
T Consensus 89 ~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~-~~~~--~~~~d~lviAtG~ 164 (484)
T 3o0h_A 89 IGFGWKYA-DPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELS-VTGE--RISAEKILIATGA 164 (484)
T ss_dssp GGGTBCCC-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TTCC--EEEEEEEEECCCE
T ss_pred HhCCcccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEe-cCCe--EEEeCEEEEccCC
Confidence 99988754 357899999999998898888888888999999999999999999877763 2433 8999999999999
Q ss_pred CCC-CCCCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHh
Q 042564 176 RAQ-RAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEG 254 (498)
Q Consensus 176 ~p~-~p~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~ 254 (498)
.|. .|++||.+.++++++++.+...+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++.+++++.+.+.+.+++
T Consensus 165 ~p~~~p~i~G~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~ 244 (484)
T 3o0h_A 165 KIVSNSAIKGSDLCLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVA 244 (484)
T ss_dssp EECCC--CBTGGGSBCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHH
T ss_pred CcccCCCCCCccccccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHH
Confidence 999 9999999888899999988888999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEe
Q 042564 255 RGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAV 334 (498)
Q Consensus 255 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~ 334 (498)
.||++++++.|.++..+++++.+.+.+|+++++|.||+|+|++|+..++.++..|++++++|+|.||++++|++|+|||+
T Consensus 245 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~ 324 (484)
T 3o0h_A 245 KGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAV 324 (484)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEEC
T ss_pred CCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEE
Confidence 99999999999999887777888999998999999999999999999877788999999999999999999999999999
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCccccc
Q 042564 335 GDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTIS 414 (498)
Q Consensus 335 GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~ 414 (498)
|||++.+++++.|..||+++|+||++......++..+|+++|++|++++||+||+||+++| .++.++...|....+++.
T Consensus 325 GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g-~~~~~~~~~~~~~~~~~~ 403 (484)
T 3o0h_A 325 GDVTGHIQLTPVAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRY-KRVEIYRTVFRPMRNVLS 403 (484)
T ss_dssp GGGGTSCCCHHHHHHHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHHC-SEEEEEEEEECCHHHHHH
T ss_pred EecCCCCcCHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHcC-CCEEEEEecCCcchhhcc
Confidence 9999989999999999999999999876666788899999999999999999999999985 467888888888777776
Q ss_pred cCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 415 GRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 415 ~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
...+.+|+|+++|+++++|||+|++|+++.|+|+.++++|++++|++||.+++++|||++|++.+++.
T Consensus 404 ~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 471 (484)
T 3o0h_A 404 GSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTMYK 471 (484)
T ss_dssp TCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGCCCS
T ss_pred CCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHhh
Confidence 67788999999999999999999999999999999999999999999999999999999999887654
No 11
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=6.8e-75 Score=594.68 Aligned_cols=443 Identities=37% Similarity=0.653 Sum_probs=399.5
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHh-hhhcCC
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELE-DARSYG 99 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~-~~~~~g 99 (498)
+.+|||+|||||+||+++|.+|++.|++|+||| +..+||+|.+.||+|+|.++..+.....+. ....|+
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE----------~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g 71 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIE----------AKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYG 71 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGT
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEc----------CCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcC
Confidence 346899999999999999999999999999999 557899999999999999999988877776 667777
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
+... ...++|..+..+......++...+...+.+.+++++.+++.+++++.+.+ +|+ .++||+||+|||++|..
T Consensus 72 ~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~---~g~--~~~~d~lviAtGs~p~~ 145 (450)
T 1ges_A 72 FDTT-INKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV---NGE--TITADHILIATGGRPSH 145 (450)
T ss_dssp EEEE-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE---TTE--EEEEEEEEECCCEEECC
T ss_pred ccCC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE---CCE--EEEeCEEEECCCCCCCC
Confidence 7543 35789999999988888888888888888899999999988888887666 543 79999999999999999
Q ss_pred CCCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEE
Q 042564 180 APIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINL 259 (498)
Q Consensus 180 p~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 259 (498)
|++||.+.++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++.+++++.+.+.+.+++.||++
T Consensus 146 p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 225 (450)
T 1ges_A 146 PDIPGVEYGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQL 225 (450)
T ss_dssp CCSTTGGGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEE
T ss_pred CCCCCccceecHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEE
Confidence 99999887889999988888899999999999999999999999999999999999999899999999999999999999
Q ss_pred EcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecccC
Q 042564 260 HPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT 338 (498)
Q Consensus 260 ~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~ 338 (498)
++++.|.++..++++ +.+++.+|+++++|.||+|+|++|+++.+.++.+|++++++|+|.||+++||++|+|||+|||+
T Consensus 226 ~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (450)
T 1ges_A 226 HTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNT 305 (450)
T ss_dssp ECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGG
T ss_pred EeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccC
Confidence 999999999876544 7788889989999999999999999987666888999998999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHhCCCCCC-CCCCCCcEEEeccCCeeEeeCCHHHHHHc-CCCCEEEEEEecCCCccccccC
Q 042564 339 NRMNLTPVALMEGTCFAKTVFGGQPCK-PDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGR 416 (498)
Q Consensus 339 ~~~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~~~~~~~~~~~~~~vG~~e~~a~~~-~~~~~~~~~~~~~~~~~~~~~~ 416 (498)
+.+++++.|.+||+++|+||+++.... .+|..+|+++|++|+++++|++|++|+.+ |..++.++...+....++....
T Consensus 306 ~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~ 385 (450)
T 1ges_A 306 GAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTH 385 (450)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSS
T ss_pred CCCccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHHhcC
Confidence 888899999999999999999865555 67888999999999999999999999987 3236888888887777776566
Q ss_pred CceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHH
Q 042564 417 QEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVT 479 (498)
Q Consensus 417 ~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~ 479 (498)
.+.+|+|+++++++++|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|++.+
T Consensus 386 ~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 448 (450)
T 1ges_A 386 RQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVT 448 (450)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGS
T ss_pred CCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHHHh
Confidence 778999999999999999999999999999999999999999999999999999999998764
No 12
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.8e-74 Score=597.21 Aligned_cols=457 Identities=40% Similarity=0.708 Sum_probs=409.8
Q ss_pred CCccEEEECCChhHHHHHHHHHh-CCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSAN-FGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
.+|||+||||||||+++|++|++ .|++|+|||++. .+..+.+..+||+|.++||+|+|.+++.+.....+.+...||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~-~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 80 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQK-HHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGW 80 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCS-SSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEeccc-ccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCc
Confidence 35899999999999999999999 999999999311 1122235678999999999999999999998888888888888
Q ss_pred cccccc--ccCHHHHHHHHHHHHHHHhHHHHHHHHhC-CcEEEEeEEEEEeCCEEEEEe---CCCc-eEEEEcCeEEEcC
Q 042564 101 EVHEKI--DFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQ---LDGT-KLSYSAKHILIAT 173 (498)
Q Consensus 101 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~~~~i~~~~~~v~~---~~g~-~~~~~~d~liiAt 173 (498)
... .. .++|..+..+.......+...+...+++. +++++.+++.+++++.+.+.. .+|. ...+.||+|||||
T Consensus 81 ~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAt 159 (490)
T 1fec_A 81 ELD-RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLAT 159 (490)
T ss_dssp ECC-GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred ccC-CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeC
Confidence 643 23 68999999999999888888888888888 999999999999999888864 2441 1489999999999
Q ss_pred CCCCCCCCCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHC---CCcEEEEeeCCCCCCCCCHHHHHHHHH
Q 042564 174 GSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGM---GSTVDLLFRKELPLRGFDDEMRAVVAR 250 (498)
Q Consensus 174 G~~p~~p~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~---g~~V~lv~~~~~~l~~~~~~~~~~l~~ 250 (498)
|++|..|++||.+.++++++++.+...+++++|||+|++|+|+|..|.++ |.+|+++++.+.+++.+++++.+.+.+
T Consensus 160 Gs~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~ 239 (490)
T 1fec_A 160 GSWPQHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTE 239 (490)
T ss_dssp CEEECCCCSBTGGGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHH
T ss_pred CCCCCCCCCCCccceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHH
Confidence 99999999999887889999999888899999999999999999999999 999999999999999999999999999
Q ss_pred HHHhCCCEEEcCccEEEEEEeCC-eEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCC
Q 042564 251 NLEGRGINLHPRTTIKELIKSEE-GVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVP 329 (498)
Q Consensus 251 ~l~~~Gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~ 329 (498)
.+++.||++++++.|.++..+++ .+.+++.+|+++++|.||+|+|++|+++.+.++.+|++++++|+|.||+++||++|
T Consensus 240 ~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~ 319 (490)
T 1fec_A 240 QLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVD 319 (490)
T ss_dssp HHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSST
T ss_pred HHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCCC
Confidence 99999999999999999987654 37788889988999999999999999987667889999998999999999999999
Q ss_pred CeEEecccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCC
Q 042564 330 SIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPM 409 (498)
Q Consensus 330 ~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~ 409 (498)
+|||+|||++.+++++.|.+||+++|+||++......+|..+|+++|++|+++++|++|++|+++ +..+.++...|.+.
T Consensus 320 ~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-~~~~~~~~~~~~~~ 398 (490)
T 1fec_A 320 NIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKK-YDQVAVYESSFTPL 398 (490)
T ss_dssp TEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHH-CSEEEEEEEEECCH
T ss_pred CEEEEeccCCCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhc-CCCEEEEEeecChh
Confidence 99999999998889999999999999999986666678889999999999999999999999987 45678888888877
Q ss_pred ccccccCCceeEE-EEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 410 RNTISGRQEKTVM-KLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 410 ~~~~~~~~~~~~~-kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
.+++....+.+|+ |+++++++++|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|.+.+++
T Consensus 399 ~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 471 (490)
T 1fec_A 399 MHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMR 471 (490)
T ss_dssp HHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC
T ss_pred hhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHHH
Confidence 7777666788999 99999999999999999999999999999999999999999999999999999887644
No 13
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.2e-73 Score=588.38 Aligned_cols=440 Identities=26% Similarity=0.430 Sum_probs=397.6
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
+.+|||+||||||||+++|..|++.|++|+|||| ...+||+|.++||+|++.++..+.....+.....
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk---------~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~--- 69 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADP---------KGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN--- 69 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECT---------TSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEEC---------CCCCCCcccccCCCchHHHHHHHHHHHHHHhccc---
Confidence 3469999999999999999999999999999996 5679999999999999999999888777766554
Q ss_pred ccccccccCHHHHHHHHHHHHHHHh--HHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLN--GIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~ 178 (498)
....++|..+..+.....+ +. ..+...+++.+++++.+++.+++++.+.|...+|+..++.||+||+|||+.|+
T Consensus 70 ---~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~ 145 (466)
T 3l8k_A 70 ---VKIPLDFSTVQDRKDYVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA 145 (466)
T ss_dssp ---SCCCCCHHHHHHHHHHHHH-HHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC
T ss_pred ---CCCCcCHHHHHHHHHhhee-ccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCcc
Confidence 2356889999888887777 76 77777888889999999999999999999888776334999999999999999
Q ss_pred CCCCCCCCcccChHHHh----ccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCC-CHHHHHHHHHHHH
Q 042564 179 RAPIPGQELAITSDEAL----SLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGF-DDEMRAVVARNLE 253 (498)
Q Consensus 179 ~p~i~g~~~~~~~~~~~----~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~-~~~~~~~l~~~l~ 253 (498)
.|++||.+.+++++++. .+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+ ++++.+.+.+.++
T Consensus 146 ~p~i~G~~~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~ 225 (466)
T 3l8k_A 146 KLRLPGVEYCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK 225 (466)
T ss_dssp CCCCTTGGGSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC
T ss_pred CCCCCCccceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE
Confidence 99999998889999988 666778999999999999999999999999999999999999987 9999999988887
Q ss_pred hCCCEEEcCccEEEEEEeC-CeEEEEEC--CCe--EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCC
Q 042564 254 GRGINLHPRTTIKELIKSE-EGVKVITD--HGE--EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNV 328 (498)
Q Consensus 254 ~~Gv~i~~~~~v~~i~~~~-~~~~v~~~--~g~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~ 328 (498)
|++++++.|.++..++ +++.+.+. +|+ ++++|.|++|+|++|+++ +.+++.|++++++| |.||+++||++
T Consensus 226 ---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd~~~~t~~ 300 (466)
T 3l8k_A 226 ---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVDETMKTNI 300 (466)
T ss_dssp ---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCCTTCBCSS
T ss_pred ---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeECCCccCCC
Confidence 9999999999998876 67778887 666 799999999999999999 66788999999999 99999999999
Q ss_pred CCeEEecccCCCCCChHHHHHHHHHHHHHHhCC--CCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEec
Q 042564 329 PSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGG--QPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSF 406 (498)
Q Consensus 329 ~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~--~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~ 406 (498)
|+|||+|||++.+++++.|.+||+++|+||++. .....++..+|+++|++|+++++|+||+||+++|+ ++.+....+
T Consensus 301 ~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~-~~~~~~~~~ 379 (466)
T 3l8k_A 301 PNVFATGDANGLAPYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGI-EIVEAEYNM 379 (466)
T ss_dssp TTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHHTC-CEEEEEEEG
T ss_pred CCEEEEEecCCCCccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhCCC-CEEEEEEEc
Confidence 999999999999999999999999999999986 55566888999999999999999999999999865 788888888
Q ss_pred CCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 407 NPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 407 ~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
....+++..+.+.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|.+.+++.
T Consensus 380 ~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~ 455 (466)
T 3l8k_A 380 EEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEIISYTAR 455 (466)
T ss_dssp GGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHHHHHHH
T ss_pred ccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHHHHHHH
Confidence 8777776666788999999999999999999999999999999999999999999999999999999999887544
No 14
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.1e-73 Score=587.46 Aligned_cols=445 Identities=40% Similarity=0.692 Sum_probs=401.9
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
|+++|||+|||||+||+++|.+|++.|++|+||| +..+||+|.+.||+|+|.++..+.+...+.+...|+
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE----------~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g 70 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIE----------SKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFG 70 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEc----------CCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcC
Confidence 3456999999999999999999999999999999 457899999999999999999988888887777787
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
+... ...++|..+..+....+..+...+...+.+.+++++.+++.+++++.+.+ +|. .++||+||+|||++|..
T Consensus 71 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~---~g~--~~~~d~lviAtGs~p~~ 144 (463)
T 2r9z_A 71 VQAS-GGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV---EGQ--RLSADHIVIATGGRPIV 144 (463)
T ss_dssp BCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE---TTE--EEEEEEEEECCCEEECC
T ss_pred cccC-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE---CCE--EEEcCEEEECCCCCCCC
Confidence 7643 35789999999998888888888888888899999999988888887666 553 79999999999999999
Q ss_pred CCCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEE
Q 042564 180 APIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINL 259 (498)
Q Consensus 180 p~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 259 (498)
|++||.+.++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.+++.||++
T Consensus 145 p~i~G~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i 224 (463)
T 2r9z_A 145 PRLPGAELGITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIET 224 (463)
T ss_dssp CSCTTGGGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCccceecHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEE
Confidence 99999877889999988888899999999999999999999999999999999999898899999999999999999999
Q ss_pred EcCccEEEEEEeCCeEEEEECCCe-EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecccC
Q 042564 260 HPRTTIKELIKSEEGVKVITDHGE-EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT 338 (498)
Q Consensus 260 ~~~~~v~~i~~~~~~~~v~~~~g~-~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~ 338 (498)
++++.|.++..++++..+++.+|+ ++++|.||+|+|++|+++.+.++++|++++++|+|.||++++|++|||||+|||+
T Consensus 225 ~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~ 304 (463)
T 2r9z_A 225 HLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDIT 304 (463)
T ss_dssp ESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGG
T ss_pred EeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecC
Confidence 999999999887767888889998 8999999999999999987656788999998999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHhCCCCCC-CCCCCCcEEEeccCCeeEeeCCHHHHHHc-CCCCEEEEEEecCCCccccccC
Q 042564 339 NRMNLTPVALMEGTCFAKTVFGGQPCK-PDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTISGR 416 (498)
Q Consensus 339 ~~~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~~~~~~~~~~~~~~vG~~e~~a~~~-~~~~~~~~~~~~~~~~~~~~~~ 416 (498)
+.+.+++.|.+||+++|.||++..... .+|..+|+++|++|+++++|++|++|+.+ | .++.++...+....+++...
T Consensus 305 ~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g-~~~~~~~~~~~~~~~~~~~~ 383 (463)
T 2r9z_A 305 GRDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLG-DVLTVYETSFTPMRYALNEH 383 (463)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHC-SCEEEEEEEECCGGGTTSSS
T ss_pred CCcccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcCC-CCEEEEEEEcccchhhhhcC
Confidence 888899999999999999999865554 67889999999999999999999999986 3 36888888888888877666
Q ss_pred CceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 417 QEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 417 ~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
.+.+|+|+++++++++|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|++.++.
T Consensus 384 ~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 448 (463)
T 2r9z_A 384 GPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEELVTLK 448 (463)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGCCC
T ss_pred CCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999987643
No 15
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.6e-73 Score=589.70 Aligned_cols=455 Identities=27% Similarity=0.444 Sum_probs=403.7
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhh-hhcCCc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELED-ARSYGW 100 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~-~~~~g~ 100 (498)
.+|||+|||||+||++||++|++.|++|+|||+.... .....+||+|.+.||+|++.++..+........ +..+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~---gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~ 78 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK---EGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGI 78 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT---TSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc---CCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 4699999999999999999999999999999942100 011248999999999999999998877766654 467777
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
... ...++|..+..+.....+.+...+...+++.+++++.+++.+++++.+.|...+|....+.||+||+|||++|..|
T Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 157 (476)
T 3lad_A 79 STG-EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEI 157 (476)
T ss_dssp ECS-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCC
T ss_pred ccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCC
Confidence 653 4678999999999988888888888888888999999999999999999988777556899999999999999877
Q ss_pred CCCCC--CcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCE
Q 042564 181 PIPGQ--ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN 258 (498)
Q Consensus 181 ~i~g~--~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 258 (498)
+.++. ..++++++...+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.+++.||+
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 237 (476)
T 3lad_A 158 PPAPVDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLK 237 (476)
T ss_dssp TTSCCCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEE
T ss_pred CCCCCCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCE
Confidence 65553 3477888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCccEEEEEEeCCeEEEEECCC---eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEec
Q 042564 259 LHPRTTIKELIKSEEGVKVITDHG---EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVG 335 (498)
Q Consensus 259 i~~~~~v~~i~~~~~~~~v~~~~g---~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~G 335 (498)
+++++.|.++..+++.+.+.+.++ +++++|.||+|+|++|+.+.+.++..|++++++|+|.||+++||++|||||+|
T Consensus 238 v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~G 317 (476)
T 3lad_A 238 ILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIG 317 (476)
T ss_dssp EEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECG
T ss_pred EEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEE
Confidence 999999999988777777777654 57999999999999999998768889999999999999999999999999999
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCcccccc
Q 042564 336 DVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISG 415 (498)
Q Consensus 336 D~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~ 415 (498)
||++.+.+++.|..||+++|+||++.. ...++..+|+++|++|++++||+||+||+++|+ ++.+....+....++...
T Consensus 318 D~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~g~-~~~~~~~~~~~~~~~~~~ 395 (476)
T 3lad_A 318 DVVRGAMLAHKASEEGVVVAERIAGHK-AQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGV-AINVGVFPFAASGRAMAA 395 (476)
T ss_dssp GGSSSCCCHHHHHHHHHHHHHHHHHCC-CCCCTTCCCEEECSSSEEEEEECCHHHHHHTTC-CEEEEEEEGGGCHHHHHH
T ss_pred ccCCCcccHHHHHHHHHHHHHHhcCCC-cccCCCCCCEEEECcCCEEEeeCCHHHHHhcCC-CEEEEEEeccccchheec
Confidence 999889999999999999999999754 446788899999999999999999999999865 677877777777777666
Q ss_pred CCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 416 RQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 416 ~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
..+.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++..
T Consensus 396 ~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 462 (476)
T 3lad_A 396 NDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAAL 462 (476)
T ss_dssp TCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCCCSSCSHHHHHHHHH
T ss_pred CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHH
Confidence 6778999999999999999999999999999999999999999999999999999999999888654
No 16
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=9.3e-74 Score=592.15 Aligned_cols=452 Identities=25% Similarity=0.332 Sum_probs=399.3
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+|||+||||||||++||.+|++.|++|+||| +..+||+|+++||+|+|.++..++.......+..||+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE----------~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 77 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIE----------GGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQV 77 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEE----------SSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEe----------CCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCC
Confidence 5899999999999999999999999999999 556999999999999999999999888888888888863
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhC-CcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
. ...++|..+..+.....+++...+...+... +++++.+++.+.+++.+.+ .++ ..++||+||||||++|..|+
T Consensus 78 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~--~~~--~~~~~d~lViATGs~p~~p~ 152 (492)
T 3ic9_A 78 D-RISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQV--DDH--SQVIAKRIVIATGSRPNYPE 152 (492)
T ss_dssp S-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEE--TTT--EEEEEEEEEECCCEECCCCH
T ss_pred C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEE--cCC--cEEEeCEEEEccCCCCcCCC
Confidence 2 4568999988888777776665554444443 6789999999999887766 344 38999999999999999988
Q ss_pred CCCC--CcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEE
Q 042564 182 IPGQ--ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINL 259 (498)
Q Consensus 182 i~g~--~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i 259 (498)
+++. ..++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.+++. |++
T Consensus 153 ~~~~~~~~v~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i 231 (492)
T 3ic9_A 153 FLAAAGSRLLTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYF 231 (492)
T ss_dssp HHHTTGGGEECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEE
T ss_pred CCCccCCcEEcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEE
Confidence 6553 3578999999988899999999999999999999999999999999999999989999999999999988 999
Q ss_pred EcCccEEEEEEeCCeEEEEEC--CC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcC-CCCCCCCCCeEEe
Q 042564 260 HPRTTIKELIKSEEGVKVITD--HG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVD-ENSRTNVPSIWAV 334 (498)
Q Consensus 260 ~~~~~v~~i~~~~~~~~v~~~--~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd-~~~~t~~~~iya~ 334 (498)
++++.|.++..+++++.+.+. +| +++++|.||+|+|++|++++++++.+|++++++|+|.|| ++++|++|+|||+
T Consensus 232 ~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~ 311 (492)
T 3ic9_A 232 DAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVA 311 (492)
T ss_dssp ETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEEC
T ss_pred EECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEE
Confidence 999999999887777777764 67 679999999999999999998889999999999999999 8999999999999
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHhC-CCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCC----CCEEEEEEecCCC
Q 042564 335 GDVTNRMNLTPVALMEGTCFAKTVFG-GQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGK----GDILVFTSSFNPM 409 (498)
Q Consensus 335 GD~~~~~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~----~~~~~~~~~~~~~ 409 (498)
|||++.+++++.|.+||+++|+||++ ......++..+|+++|++|+++++|+||+||++++. .++.+....|...
T Consensus 312 GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~ 391 (492)
T 3ic9_A 312 GDANNTLTLLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQ 391 (492)
T ss_dssp GGGGTSSCSHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGC
T ss_pred EecCCCCccHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccc
Confidence 99999999999999999999999997 333445678899999999999999999999998831 2688888888888
Q ss_pred ccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH-HHHHHHh
Q 042564 410 RNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR-SVTRRVA 488 (498)
Q Consensus 410 ~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~-~~~~~~~ 488 (498)
.++...+.+.+|+|+++|+++++|||+|++|+++.|+|+.+++||++++|++||.+++++|||++|++.++. .+.+++.
T Consensus 392 ~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~~~~~~~ 471 (492)
T 3ic9_A 392 GRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMPFYHPVIEEGLRTALRDAQQKLA 471 (492)
T ss_dssp HHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSCCCTTCTHHHHHHHHHHHHHTSS
T ss_pred hhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCChHHHHHHHHHHHHHHhh
Confidence 877666778899999999999999999999999999999999999999999999999999999999999854 4555554
Q ss_pred cc
Q 042564 489 AA 490 (498)
Q Consensus 489 ~~ 490 (498)
.+
T Consensus 472 ~~ 473 (492)
T 3ic9_A 472 IE 473 (492)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 17
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.3e-72 Score=581.52 Aligned_cols=449 Identities=27% Similarity=0.459 Sum_probs=399.5
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhh-hhcCCcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELED-ARSYGWE 101 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~-~~~~g~~ 101 (498)
+|||+|||||+||++||.+|++.|++|+|||+ ...+||+|.+.||+|+|.++..+...+.+.. ...+|+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~---------~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~ 72 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEK---------RGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLM 72 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeC---------CCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 58999999999999999999999999999994 3378999999999999999988877766654 6667766
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
......++|..+..+.....+.+...+...+++.+++++.+++.+++++.+.|.+.+|+...++||+||+|||++|..|+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~ 152 (468)
T 2qae_A 73 GGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELP 152 (468)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBT
T ss_pred cCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCC
Confidence 42345678999998888888888777778888889999999988899999999887764458999999999999999998
Q ss_pred CCCCC--cccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHH-HhCCCE
Q 042564 182 IPGQE--LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNL-EGRGIN 258 (498)
Q Consensus 182 i~g~~--~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l-~~~Gv~ 258 (498)
++|.+ .++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++.+++++.+.+.+.+ ++.||+
T Consensus 153 ~~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~ 232 (468)
T 2qae_A 153 FLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMK 232 (468)
T ss_dssp TBCCCSSSEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCCcCceechHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcE
Confidence 88875 378999999888889999999999999999999999999999999999999999999999999999 999999
Q ss_pred EEcCccEEEEEEeCCeEEEEEC--CC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEe
Q 042564 259 LHPRTTIKELIKSEEGVKVITD--HG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAV 334 (498)
Q Consensus 259 i~~~~~v~~i~~~~~~~~v~~~--~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~ 334 (498)
+++++.|.++..+++++.+.+. +| +++++|.||+|+|++||++++.+++.|++++++|+|.||+++||++|+|||+
T Consensus 233 i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~ 312 (468)
T 2qae_A 233 FMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAI 312 (468)
T ss_dssp EECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEEC
T ss_pred EEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCCEEEe
Confidence 9999999999877666666665 66 5799999999999999999876788899999889999999999999999999
Q ss_pred cccCC-CCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCcccc
Q 042564 335 GDVTN-RMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTI 413 (498)
Q Consensus 335 GD~~~-~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~ 413 (498)
|||++ .+++++.|.+||+++|+||++.. ...++..+|+++|++|+++++|++|++|++.|+ ++.+...++....++.
T Consensus 313 GD~~~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~-~~~~~~~~~~~~~~~~ 390 (468)
T 2qae_A 313 GDVVDKGPMLAHKAEDEGVACAEILAGKP-GHVNYGVIPAVIYTMPEVASVGKSEDELKKEGV-AYKVGKFPFNANSRAK 390 (468)
T ss_dssp GGGBSSSCSCHHHHHHHHHHHHHHHTTCC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHTTC-CEEEEEEEGGGCHHHH
T ss_pred eccCCCCCccHhHHHHHHHHHHHHHcCCC-ccCCCCCCCEEEECCCceEEEeCCHHHHHhcCC-CEEEEEEecccchhhh
Confidence 99999 88999999999999999999753 445677899999999999999999999999854 7888888887777766
Q ss_pred ccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 414 SGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 414 ~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
....+.+|+|+++|+++++|+|++++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 391 ~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 459 (468)
T 2qae_A 391 AVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACM 459 (468)
T ss_dssp HTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTHHHHHHHHH
T ss_pred hcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHH
Confidence 566778999999999899999999999999999999999999999999999999999999999987653
No 18
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=5.8e-73 Score=585.69 Aligned_cols=452 Identities=30% Similarity=0.469 Sum_probs=401.2
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
|+.+|||+|||||+||+++|+.|++.|++|+|||+ ...+||+|.+.||+|++.++..+.....+.....+|
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~---------~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~g 73 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVER---------YKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANG 73 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeC---------CCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCC
Confidence 44468999999999999999999999999999994 367899999999999999998888877777777777
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCC----------ceEEEEcCeE
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDG----------TKLSYSAKHI 169 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g----------~~~~~~~d~l 169 (498)
+... ...++|..+..+.......+...+...+.+.+++++.+++.+++++.+.+...+| +..+++||+|
T Consensus 74 i~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~l 152 (482)
T 1ojt_A 74 IKYP-EPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNC 152 (482)
T ss_dssp CCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred cccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEE
Confidence 7653 3568899998888887777777777788888999999998888888888865443 1247999999
Q ss_pred EEcCCCCCCCCC-CCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHH
Q 042564 170 LIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVV 248 (498)
Q Consensus 170 iiAtG~~p~~p~-i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l 248 (498)
|+|||+.|..|+ ++....++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+++++.+++++.+.+
T Consensus 153 ViAtGs~p~~~~~i~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l 232 (482)
T 1ojt_A 153 IIAAGSRVTKLPFIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVW 232 (482)
T ss_dssp EECCCEEECCCSSCCCCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHH
T ss_pred EECCCCCCCCCCCCCccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHH
Confidence 999999998887 6633357889999888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEcCccEEEEEEeCCeEEEEECC----CeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCC
Q 042564 249 ARNLEGRGINLHPRTTIKELIKSEEGVKVITDH----GEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENS 324 (498)
Q Consensus 249 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~----g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~ 324 (498)
.+.+++.||++++++.|.++..+++...+++.+ |+++++|.||+|+|++||++++.++++|++++++|+|.||+++
T Consensus 233 ~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 312 (482)
T 1ojt_A 233 QKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQM 312 (482)
T ss_dssp HHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTS
T ss_pred HHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCc
Confidence 999999999999999999998877777777766 7789999999999999999987678899999988999999999
Q ss_pred CCCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEE
Q 042564 325 RTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTS 404 (498)
Q Consensus 325 ~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~ 404 (498)
||+.|+|||+|||++.+++++.|.+||+++|+||++.. ...++..+|+++|++|++++||+||+||++.|+ ++.+...
T Consensus 313 ~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~-~~~~~~~ 390 (482)
T 1ojt_A 313 RTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHK-AYFDARVIPGVAYTSPEVAWVGETELSAKASAR-KITKANF 390 (482)
T ss_dssp BCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC-CCCCCCCCCEEECSSSCEEEEECCHHHHHHHTC-CEEEEEE
T ss_pred ccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCC-ccCCCCCCCEEEEcCCCeEEEeCCHHHHHhcCC-CEEEEEE
Confidence 99999999999999988999999999999999999843 445678899999999999999999999999865 6888888
Q ss_pred ecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHHH
Q 042564 405 SFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRSV 483 (498)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~ 483 (498)
.+....++.....+.+|+|+++|+++++|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++...
T Consensus 391 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~ 469 (482)
T 1ojt_A 391 PWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESIGMAAEV 469 (482)
T ss_dssp EGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSTTHHHHHHHH
T ss_pred EcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHH
Confidence 8777777665567789999999999999999999999999999999999999999999999999999999998886543
No 19
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.9e-73 Score=585.96 Aligned_cols=445 Identities=37% Similarity=0.613 Sum_probs=386.7
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+|||+|||||+||+++|.+|++.|++|+||| +..+||+|.+.||+|++.++..+.+...+.+...|++..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE----------~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~ 71 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVE----------KSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDT 71 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCC
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEe----------CCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCcc
Confidence 4899999999999999999999999999999 456899999999999999999988888888888888765
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeC---------CCceEEEEcCeEEEcC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQL---------DGTKLSYSAKHILIAT 173 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~---------~g~~~~~~~d~liiAt 173 (498)
. ..++|..+..+....+..+...+...+++.+++++.+++..++++.+.+... ++....++||+||+||
T Consensus 72 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAt 149 (500)
T 1onf_A 72 K--FSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAV 149 (500)
T ss_dssp C--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECC
T ss_pred C--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECC
Confidence 4 5789999998888888888888888888899999999877777766666430 0112378999999999
Q ss_pred CCCCCCCCCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHH
Q 042564 174 GSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLE 253 (498)
Q Consensus 174 G~~p~~p~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~ 253 (498)
|++|..|++||.+.++++++++.+.. +++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.++
T Consensus 150 Gs~p~~p~i~G~~~~~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~ 228 (500)
T 1onf_A 150 GNKPVFPPVKGIENTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMK 228 (500)
T ss_dssp CCCBCCCSCTTGGGCEEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcccCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHH
Confidence 99999999999877888888888877 99999999999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEcCccEEEEEEeCCe-EEEEECCCeE-EEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCe
Q 042564 254 GRGINLHPRTTIKELIKSEEG-VKVITDHGEE-IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSI 331 (498)
Q Consensus 254 ~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~-i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~i 331 (498)
+.||++++++.|.++..++++ +.+.+.+|++ +++|.||+|+|++|+++.+.++++|+++ ++|+|.||+++||++|+|
T Consensus 229 ~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t~~~~i 307 (500)
T 1onf_A 229 KNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSVNNI 307 (500)
T ss_dssp HTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBCSSSSE
T ss_pred hCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCcccCCCCE
Confidence 999999999999999876543 7788889987 9999999999999999866568889998 789999999999999999
Q ss_pred EEecccC----------------------------------CCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEec
Q 042564 332 WAVGDVT----------------------------------NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFC 377 (498)
Q Consensus 332 ya~GD~~----------------------------------~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~ 377 (498)
||+|||+ +.+++++.|.+||+++|+||+++.....+|..+|+++|+
T Consensus 308 ya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~ 387 (500)
T 1onf_A 308 YAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIFS 387 (500)
T ss_dssp EECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEEECC
T ss_pred EEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeEEEc
Confidence 9999999 457789999999999999999866556678889999999
Q ss_pred cCCeeEeeCCHHHHHHc-CCCCEEEEEEecCCCcccc----ccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHH
Q 042564 378 IPPLSVVGLSEEQAIEQ-GKGDILVFTSSFNPMRNTI----SGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAV 452 (498)
Q Consensus 378 ~~~~~~vG~~e~~a~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~ 452 (498)
+|+++++|++|++|+.+ |..++.++...+....++. ....+.+|+|+++|+++++|+|+|++|+++.|+|+.+++
T Consensus 388 ~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ 467 (500)
T 1onf_A 388 HPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAV 467 (500)
T ss_dssp SSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHH
T ss_pred CcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHH
Confidence 99999999999999987 2136788887887777664 445678999999999999999999999999999999999
Q ss_pred HHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 453 ALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 453 ~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
+|++++|++||.+++++|||++|++.++.
T Consensus 468 ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 496 (500)
T 1onf_A 468 ALKMNATKKDFDETIPIHPTAAEEFLTLQ 496 (500)
T ss_dssp HHHTTCBHHHHHTSCCCTTCSTTHHHHCC
T ss_pred HHHcCCCHHHHhccccCCCCHHHHHHHhc
Confidence 99999999999999999999999987643
No 20
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2.9e-72 Score=577.39 Aligned_cols=440 Identities=36% Similarity=0.545 Sum_probs=394.2
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+|||+|||||+||+++|..|++.|++|+||| +..+||+|.+.||+|+|.++..+.....+.....||+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie----------~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~- 74 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVE----------AGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK- 74 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEe----------CCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC-
Confidence 5899999999999999999999999999999 44589999999999999999988877777777778876
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC-
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP- 181 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~- 181 (498)
....++|..++.+.....+.+...+...+++.+++++.+++.+++++.+.+. |+ +++||+||+|||++|+.|+
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~---g~--~~~~d~lViATGs~p~~p~g 148 (464)
T 2eq6_A 75 -AKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG---GE--RYGAKSLILATGSEPLELKG 148 (464)
T ss_dssp -CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET---TE--EEEEEEEEECCCEEECCBTT
T ss_pred -CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc---cE--EEEeCEEEEcCCCCCCCCCC
Confidence 3467899999988888888777777777888899999999888888877662 43 7999999999999999886
Q ss_pred CCCCCcccChHHHhcccc-CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEE
Q 042564 182 IPGQELAITSDEALSLEE-LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260 (498)
Q Consensus 182 i~g~~~~~~~~~~~~l~~-~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 260 (498)
+++...++++++++.+.. .+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.+++.||+++
T Consensus 149 i~~~~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~ 228 (464)
T 2eq6_A 149 FPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVR 228 (464)
T ss_dssp BCCSSSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEE
Confidence 777445789999988877 8999999999999999999999999999999999999998999999999999999999999
Q ss_pred cCccEEEEEEeCCeEEEEEC-C--Ce--EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEec
Q 042564 261 PRTTIKELIKSEEGVKVITD-H--GE--EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVG 335 (498)
Q Consensus 261 ~~~~v~~i~~~~~~~~v~~~-~--g~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~G 335 (498)
+++.|.++..+++.+.+++. + |+ ++++|.|++|+|++|+.+++.++..|++++++|+|.||+++||+.|+|||+|
T Consensus 229 ~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~G 308 (464)
T 2eq6_A 229 TKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIG 308 (464)
T ss_dssp CSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECG
T ss_pred cCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEe
Confidence 99999999887777777765 6 76 8999999999999999998767888999988899999999999999999999
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCcccccc
Q 042564 336 DVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISG 415 (498)
Q Consensus 336 D~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~ 415 (498)
||++.+++++.|.+||+++|+||++.. ...++. +|+++|++|+++++|++|++|+..|+ ++.+....+....++...
T Consensus 309 D~~~~~~l~~~A~~~g~~aa~~i~g~~-~~~~~~-~p~~~~~~~~~a~vG~~e~~a~~~g~-~~~~~~~~~~~~~~~~~~ 385 (464)
T 2eq6_A 309 DAARPPLLAHKAMREGLIAAENAAGKD-SAFDYQ-VPSVVYTSPEWAGVGLTEEEAKRAGY-KVKVGKFPLAASGRALTL 385 (464)
T ss_dssp GGTCSSCCHHHHHHHHHHHHHHHTTCC-CCCCCC-CCEEECSSSEEEEEECCHHHHHHTTC-CEEEEEEEGGGCHHHHHT
T ss_pred ccCCCcccHHHHHHHHHHHHHHhcCCC-cccCCC-CCeEEECCCCEEEEeCCHHHHHhcCC-CEEEEEEEcCcchhhhhc
Confidence 999988999999999999999999743 345677 99999999999999999999999865 678888878777776555
Q ss_pred CCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 416 RQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 416 ~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
..+.+|+|+++|+++++|+|++++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 386 ~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 452 (464)
T 2eq6_A 386 GGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAE 452 (464)
T ss_dssp SCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHHHHHHHH
T ss_pred CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHH
Confidence 6678999999999899999999999999999999999999999999999999999999999988654
No 21
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=4.9e-72 Score=578.04 Aligned_cols=449 Identities=32% Similarity=0.483 Sum_probs=399.9
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHh--hhhcCC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELE--DARSYG 99 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~--~~~~~g 99 (498)
.+|||+||||||||+++|..|++.|++|+|||+ ...+||+|.+.||+|+|.++..+.....+. ....+|
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~---------~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g 75 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEK---------NETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRG 75 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeC---------CCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCc
Confidence 358999999999999999999999999999994 336899999999999999998887776666 666777
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
+... ...++|..+..+.....+.+...+...+++.+++++.+++.+++++.+.|.+.+|...+++||+||+|||++|..
T Consensus 76 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 76 IEMS-EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp EEES-CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred cccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCC
Confidence 7632 356789999988888887777777788888999999999888999999998766323579999999999999999
Q ss_pred CCCCCCCc--ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC-CCCHHHHHHHHHHHHhCC
Q 042564 180 APIPGQEL--AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR-GFDDEMRAVVARNLEGRG 256 (498)
Q Consensus 180 p~i~g~~~--~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~-~~~~~~~~~l~~~l~~~G 256 (498)
|+++|.+. ++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++ .+++++.+.+.+.+++.|
T Consensus 155 p~i~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~G 234 (474)
T 1zmd_A 155 FPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQG 234 (474)
T ss_dssp CTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCcCcEEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCC
Confidence 99998753 789999988888899999999999999999999999999999999999999 799999999999999999
Q ss_pred CEEEcCccEEEEEEeCCe-EEEEE-----CCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCC
Q 042564 257 INLHPRTTIKELIKSEEG-VKVIT-----DHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPS 330 (498)
Q Consensus 257 v~i~~~~~v~~i~~~~~~-~~v~~-----~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~ 330 (498)
|++++++.|.++..++++ +.+.+ .+++++++|.||+|+|++|+++++.++++|++++++|+|.||+++||+.|+
T Consensus 235 v~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~ 314 (474)
T 1zmd_A 235 FKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPN 314 (474)
T ss_dssp CEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTT
T ss_pred CEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCCC
Confidence 999999999999877655 66664 466789999999999999999987678889999988999999999999999
Q ss_pred eEEecccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCc
Q 042564 331 IWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMR 410 (498)
Q Consensus 331 iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~ 410 (498)
|||+|||++.+++++.|.+||+++|+||++.. ...+|..+|+++|++|+++++|++|++|+..|+ ++.+...++....
T Consensus 315 IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~-~~~~~~~~~~~~~ 392 (474)
T 1zmd_A 315 IYAIGDVVAGPMLAHKAEDEGIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGI-EYKVGKFPFAANS 392 (474)
T ss_dssp EEECGGGSSSCCCHHHHHHHHHHHHHHHTTCC-CCCCGGGCCEEECSSSEEEEEECCHHHHHHHTC-CEEEEEEEGGGCH
T ss_pred EEEeeecCCCCccHHHHHHHHHHHHHHhcCCC-CcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCC-CEEEEEEecccch
Confidence 99999999988999999999999999999753 445678899999999999999999999998865 7888888887777
Q ss_pred cccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 411 NTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 411 ~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
++.....+.+|+|+++++++++|+|++++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 393 ~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 464 (474)
T 1zmd_A 393 RAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANL 464 (474)
T ss_dssp HHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTCTHHHHHHHHH
T ss_pred hhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHH
Confidence 765556678999999999899999999999999999999999999999999999999999999999987654
No 22
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.4e-72 Score=572.95 Aligned_cols=445 Identities=31% Similarity=0.531 Sum_probs=397.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+|||+|||||+||+++|.+|++.|++|+||| +..+||+|.+.+|+|+|.++..+.....+.....+|+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie----------~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~ 72 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVE----------KGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKA 72 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEE----------CCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 4899999999999999999999999999999 447899999999999999998888777777777777764
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI 182 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~i 182 (498)
. ...++|..++.+.....+.+...+...+++.+++++.+++.+++++.+.|.+.+|. .+++||+||+|||++|..|++
T Consensus 73 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~-~~i~~d~lViATGs~p~~~~~ 150 (455)
T 1ebd_A 73 E-NVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSA-QTYTFKNAIIATGSRPIELPN 150 (455)
T ss_dssp C-SCEECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEE-EEEECSEEEECCCEEECCBTT
T ss_pred C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCc-EEEEeCEEEEecCCCCCCCCC
Confidence 3 35678999888887777777777888888889999999988899999999876652 479999999999999999988
Q ss_pred CCCCc-ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEc
Q 042564 183 PGQEL-AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHP 261 (498)
Q Consensus 183 ~g~~~-~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~ 261 (498)
+|.+. ++++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.+.+++.||++++
T Consensus 151 ~g~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 230 (455)
T 1ebd_A 151 FKFSNRILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVT 230 (455)
T ss_dssp BCCCSSEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCccceEecHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 88643 77888888888889999999999999999999999999999999999999989999999999999999999999
Q ss_pred CccEEEEEEeCCeEEEEEC---CCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecccC
Q 042564 262 RTTIKELIKSEEGVKVITD---HGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVT 338 (498)
Q Consensus 262 ~~~v~~i~~~~~~~~v~~~---~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~ 338 (498)
++.|.++..+++++.+.+. +++++++|.||+|+|++|+.+++.+++.|++++++|+|.||+++||++|+|||+|||+
T Consensus 231 ~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~ 310 (455)
T 1ebd_A 231 NALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIV 310 (455)
T ss_dssp SEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGS
T ss_pred CCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEeccC
Confidence 9999999887766666654 4567999999999999999998767888999998899999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCccccccCCc
Q 042564 339 NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQE 418 (498)
Q Consensus 339 ~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (498)
+.+++++.|.+||+++|+||++. ....++..+|+++|++|+++++|++|++|+..|+ ++.+....+....++.....+
T Consensus 311 ~~~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~ 388 (455)
T 1ebd_A 311 PGPALAHKASYEGKVAAEAIAGH-PSAVDYVAIPAVVFSDPECASVGYFEQQAKDEGI-DVIAAKFPFAANGRALALNDT 388 (455)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTSC-CCCCCCSCCCEEECSSSCEEEEECCHHHHHTTTC-CEEEEEEEGGGCHHHHHHTCC
T ss_pred CCcccHHHHHHHHHHHHHHHcCC-CccCCCCCCCEEEECCCceEEEeCCHHHHHhcCC-CEEEEEEEcCcchHHhhcCCC
Confidence 98899999999999999999975 3445678899999999999999999999998754 788888877777776555667
Q ss_pred eeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 419 KTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 419 ~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
.+|+|+++++++++|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++.
T Consensus 389 ~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~ 451 (455)
T 1ebd_A 389 DGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAA 451 (455)
T ss_dssp CCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHHHHHHH
T ss_pred cEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999988764
No 23
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.8e-72 Score=582.02 Aligned_cols=449 Identities=22% Similarity=0.372 Sum_probs=400.4
Q ss_pred CccEEEECCChhHHHHHHHHHhC---CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 23 DFDLFVIGAGSGGVRAARFSANF---GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~---g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
+|||+|||||+||+++|++|++. |.+|+||| +..+||+|.+.||+|+|.++..+.....+..+..+|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE----------~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g 71 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVID----------CDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLG 71 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEE----------SSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEe----------CCCcCCcccCcCccchHHHHHHHHHHHHHHHHHhCC
Confidence 48999999999999999999998 99999999 444899999999999999999888877777777777
Q ss_pred ccc-ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeC------CEEEEEeCCCceEEEEcCeEEEc
Q 042564 100 WEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGP------NEVEVTQLDGTKLSYSAKHILIA 172 (498)
Q Consensus 100 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~------~~~~v~~~~g~~~~~~~d~liiA 172 (498)
+.. .....++|..+..+.......+...+...+++.+++++.+++.++++ +.+.|...+|+...+.||+||+|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviA 151 (499)
T 1xdi_A 72 FHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVA 151 (499)
T ss_dssp BC------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEEC
T ss_pred CccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEc
Confidence 652 23456789999988888888888888888888999999999888888 67778776664347999999999
Q ss_pred CCCCCCCCCCCCCCc--ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHH
Q 042564 173 TGSRAQRAPIPGQEL--AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR 250 (498)
Q Consensus 173 tG~~p~~p~i~g~~~--~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~ 250 (498)
||+.|..|+++|.+. +++++++..+...+++++|||+|++|+|+|..+.++|.+|+++++.+.+++.+++++.+.+.+
T Consensus 152 TGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~ 231 (499)
T 1xdi_A 152 TGASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEE 231 (499)
T ss_dssp CCEEECCCGGGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHH
Confidence 999999998888753 678888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCC
Q 042564 251 NLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPS 330 (498)
Q Consensus 251 ~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~ 330 (498)
.+++.||++++++.|.++..+++++.+.+.+|+++++|.||+|+|++|+++++.++++|++++++|+|.||+++||++|+
T Consensus 232 ~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t~~~~ 311 (499)
T 1xdi_A 232 SFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATG 311 (499)
T ss_dssp HHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBCSSTT
T ss_pred HHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcccCCCC
Confidence 99999999999999999987766677888888899999999999999999987778899999988999999999999999
Q ss_pred eEEecccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCc
Q 042564 331 IWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMR 410 (498)
Q Consensus 331 iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~ 410 (498)
|||+|||++.+++++.|.+||+++|+||++......++..+|+++|++|+++++|++|++|+.+|+ ++.+....+....
T Consensus 312 IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~-~~~~~~~~~~~~~ 390 (499)
T 1xdi_A 312 IYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSV-AARTIMLPLRTNA 390 (499)
T ss_dssp EEECSGGGTSCSCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHTSS-CEEEEEEESTTSH
T ss_pred EEEEeccCCCcccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhCCC-CEEEEEEecCccc
Confidence 999999999888999999999999999998644455678899999999999999999999999865 7888888887777
Q ss_pred cccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 411 NTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 411 ~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
++.....+.+|+|+++++++++|+|++++|+.+.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 391 ~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 462 (499)
T 1xdi_A 391 RAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAAR 462 (499)
T ss_dssp HHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBCCSSSTHHHHHHHHH
T ss_pred ceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHH
Confidence 766566678999999998899999999999999999999999999999999999999999999999887644
No 24
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=6.4e-72 Score=575.63 Aligned_cols=447 Identities=28% Similarity=0.432 Sum_probs=395.9
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHh-hhhcCCcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELE-DARSYGWE 101 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~-~~~~~g~~ 101 (498)
+|||+||||||||+++|..|++.|.+|+||| +..+||+|.+.||+|++.++......+.+. ....+++.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE----------~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~ 72 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVE----------PKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS 72 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEe----------CCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4899999999999999999999999999999 446899999999999999988877666654 55566665
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
....++|..+..+.......+...+...+++.+++++.+++..++++.+.|.+.+|+...++||+||+|||++|+.|+
T Consensus 73 --~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~ 150 (464)
T 2a8x_A 73 --GEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVP 150 (464)
T ss_dssp --ECCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCT
T ss_pred --CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCC
Confidence 235678988888777777777777777888889999999988888888999877763358999999999999999998
Q ss_pred CCCCCc-ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEE
Q 042564 182 IPGQEL-AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260 (498)
Q Consensus 182 i~g~~~-~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 260 (498)
++|.+. ++++++.+.+...+++++|||+|++|+|+|..|.++|.+|+++++.+++++.+++++.+.+.+.+++.||+++
T Consensus 151 ~~g~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 230 (464)
T 2a8x_A 151 GTSLSANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTIL 230 (464)
T ss_dssp TCCCBTTEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCCCceEEecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEE
Confidence 888643 7888898888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccEEEEEEeCCeEEEEEC-CC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEeccc
Q 042564 261 PRTTIKELIKSEEGVKVITD-HG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDV 337 (498)
Q Consensus 261 ~~~~v~~i~~~~~~~~v~~~-~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~ 337 (498)
+++.|.++..+++.+.+.+. +| +++++|.|++|+|++||+++++++++|++++++|+|.||+++||++|+|||+|||
T Consensus 231 ~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~ 310 (464)
T 2a8x_A 231 TATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDV 310 (464)
T ss_dssp CSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGGG
T ss_pred eCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeECc
Confidence 99999999877666666664 56 6799999999999999999877788899999889999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHHhCCCCCC-CCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCccccccC
Q 042564 338 TNRMNLTPVALMEGTCFAKTVFGGQPCK-PDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGR 416 (498)
Q Consensus 338 ~~~~~~~~~A~~~g~~aa~~i~~~~~~~-~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (498)
++.+++++.|.+||+++|+||++..... .+|..+|+++|++|+++++|++|++|+..|+ ++.+...++....++....
T Consensus 311 ~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~-~~~~~~~~~~~~~~~~~~~ 389 (464)
T 2a8x_A 311 NGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGY-DVVVAKFPFTANAKAHGVG 389 (464)
T ss_dssp GCSSCSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHTTC-CEEEEEEEGGGCHHHHHHT
T ss_pred CCCccCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCC-CEEEEEEEcchhhhhhhcC
Confidence 9988999999999999999999833334 5677899999999999999999999999865 6888888887777765556
Q ss_pred CceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 417 QEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 417 ~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
.+.+|+|+++|+++++|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 390 ~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 455 (464)
T 2a8x_A 390 DPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFH 455 (464)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTHHHHHHHH
T ss_pred CCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999999999999999987653
No 25
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.5e-71 Score=572.57 Aligned_cols=449 Identities=31% Similarity=0.495 Sum_probs=396.4
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhh-hhcCCc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELED-ARSYGW 100 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~-~~~~g~ 100 (498)
.+|||+|||||+||+++|..|++.|++|+|||+ ...+||+|.+.||+|++.++..+.....+.. ...+|+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~---------~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~ 75 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEK---------RGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGV 75 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEEC---------SSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeC---------CCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCc
Confidence 468999999999999999999999999999994 3368999999999999999888777666654 555666
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
... ...++|..++.+.......+...+...+++.+++++.+++..++++.+.|.+.+|....++||+||+|||++|..|
T Consensus 76 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 76 KVS-NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp EES-CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred ccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 533 3457898888888777777777777777888999999998889999998877666335899999999999999999
Q ss_pred CCCCCC--cccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCE
Q 042564 181 PIPGQE--LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN 258 (498)
Q Consensus 181 ~i~g~~--~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 258 (498)
+++|.+ .++++++++.+...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++.+++++.+.+.+.+++.||+
T Consensus 155 ~~~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~ 234 (470)
T 1dxl_A 155 PGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMK 234 (470)
T ss_dssp TTBCCCSSSEECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCC
T ss_pred CCCCCCcccEEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCE
Confidence 888875 378889988888889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCccEEEEEEeCCeEEEEEC---CC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEE
Q 042564 259 LHPRTTIKELIKSEEGVKVITD---HG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWA 333 (498)
Q Consensus 259 i~~~~~v~~i~~~~~~~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya 333 (498)
+++++.|.++..+++++.+.+. +| +++++|.||+|+|++||++++.++++|++++++|+|.||+++||++|+|||
T Consensus 235 i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iya 314 (470)
T 1dxl_A 235 FKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYA 314 (470)
T ss_dssp EECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTEEE
T ss_pred EEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCCCEEE
Confidence 9999999999876655666654 44 679999999999999999987778889999988999999999999999999
Q ss_pred ecccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCcccc
Q 042564 334 VGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTI 413 (498)
Q Consensus 334 ~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~ 413 (498)
+|||++.+++++.|.+||+++|+||++. ....++..+|+++|++|+++++|++|++|+..|+ ++.+...++....++.
T Consensus 315 ~GD~~~~~~~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~-~~~~~~~~~~~~~~~~ 392 (470)
T 1dxl_A 315 IGDVIPGPMLAHKAEEDGVACVEYLAGK-VGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGV-EYRVGKFPFMANSRAK 392 (470)
T ss_dssp CSTTSSSCCCHHHHHHHHHHHHHHHTTS-CCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTC-CEEEEEEEGGGCHHHH
T ss_pred EeccCCCCccHHHHHHHHHHHHHHHcCC-CcCCCCCCCCEEEECCCceEEEcCCHHHHHhcCC-cEEEEEEecccchHHH
Confidence 9999998889999999999999999975 3445678899999999999999999999998855 7888888887777765
Q ss_pred ccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 414 SGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 414 ~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
....+.+|+|+++|+++++|+|++++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 393 ~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 461 (470)
T 1dxl_A 393 AIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAM 461 (470)
T ss_dssp HHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHH
T ss_pred hcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHH
Confidence 556678999999999899999999999999999999999999999999999999999999999987653
No 26
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=2e-70 Score=564.98 Aligned_cols=448 Identities=29% Similarity=0.433 Sum_probs=392.7
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcC-
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSY- 98 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~- 98 (498)
|+.++||+|||||+||+++|++|++.|++|+||| +..+||+|.|.||+|+|.++..+.........+.+
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie----------~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~ 70 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIE----------RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDG 70 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEE----------SSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEe----------CCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcC
Confidence 4456899999999999999999999999999999 55789999999999999998887766555555544
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHhH-HHHHHHHhC-CcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCC
Q 042564 99 GWEVHEKIDFDWKKLLQKKTDEILRLNG-IYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~ 176 (498)
|+.. .....+|..+..+.......+.. .+...+.+. +++++.+++.+++++.+.|.+.+|+...++||+||+|||++
T Consensus 71 g~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~ 149 (467)
T 1zk7_A 71 GIAA-TVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGAS 149 (467)
T ss_dssp TSCC-CCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEE
T ss_pred CccC-CCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCC
Confidence 4432 23567888888777666655543 344566777 99999999999999999998877744589999999999999
Q ss_pred CCCCCCCCCCc--ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHh
Q 042564 177 AQRAPIPGQEL--AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEG 254 (498)
Q Consensus 177 p~~p~i~g~~~--~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~ 254 (498)
|+.|++||.+. ++++++++++...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++ +++++.+.+.+.+++
T Consensus 150 p~~p~i~G~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~ 228 (467)
T 1zk7_A 150 PAVPPIPGLKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPAIGEAVTAAFRA 228 (467)
T ss_dssp ECCCCCTTTTTSCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCcCceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHHHHHHHHHHHh
Confidence 99999999753 678888888888899999999999999999999999999999999999999 999999999999999
Q ss_pred CCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEe
Q 042564 255 RGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAV 334 (498)
Q Consensus 255 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~ 334 (498)
.||++++++.|.++..+++...+.++ +.++++|.||+|+|++|+.+.+.++..+++++++|+|.||++++|+.|+|||+
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~ 307 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAA 307 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEEC
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEEE
Confidence 99999999999999887766667776 45799999999999999998766788899999889999999999999999999
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCccccc
Q 042564 335 GDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTIS 414 (498)
Q Consensus 335 GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~ 414 (498)
|||+..+.+++.|..||+++|.||++. ....++..+|++.|++|+++++|++|++|+..|+ ++.+....+....+++.
T Consensus 308 GD~~~~~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~g~-~~~~~~~~~~~~~~~~~ 385 (467)
T 1zk7_A 308 GDCTDQPQFVYVAAAAGTRAAINMTGG-DAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGI-ETDSRTLTLDNVPRALA 385 (467)
T ss_dssp STTBSSCCCHHHHHHHHHHHHHHHTTC-CCCCCCTTCEEEECSSSEEEEEECCHHHHHHTTC-CEEEEEEEGGGCHHHHH
T ss_pred eccCCCcccHHHHHHHHHHHHHHHcCC-CcccCCCCCCEEEecCCceEEEecCHHHHHhcCC-CeEEEEEecccchhhhh
Confidence 999998889999999999999999976 3456677899999999999999999999998865 67777777776666655
Q ss_pred cCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 415 GRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 415 ~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
...+.+|+|+++++++++|+|++++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 386 ~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 453 (467)
T 1zk7_A 386 NFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQ 453 (467)
T ss_dssp TTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTTHHHHHHHH
T ss_pred cCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHH
Confidence 56678999999999899999999999999999999999999999999999999999999999988653
No 27
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=7.7e-70 Score=562.43 Aligned_cols=449 Identities=29% Similarity=0.489 Sum_probs=390.5
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHh-hhhcCC
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELE-DARSYG 99 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~-~~~~~g 99 (498)
+.+|||+||||||||+++|..|++.|++|+|||+ ...+||+|.+.||+|+|.++..+.....+. ....+|
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~---------~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g 73 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEK---------RGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRG 73 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEec---------CCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3468999999999999999999999999999994 367899999999999999998887766654 456666
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEE------EEcCeEEEcC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLS------YSAKHILIAT 173 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~------~~~d~liiAt 173 (498)
+.......++|..+..+.....+.+...+...+++.+++++.++..+.+++.+.|.+.+|.... ++||+||+||
T Consensus 74 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAt 153 (478)
T 1v59_A 74 IDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVAT 153 (478)
T ss_dssp EEECSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECC
T ss_pred cccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECc
Confidence 6542235678999888888777777777777888899999999988888888988876662235 9999999999
Q ss_pred CCCCCCCCCCCCC----cccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHH
Q 042564 174 GSRAQRAPIPGQE----LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVA 249 (498)
Q Consensus 174 G~~p~~p~i~g~~----~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~ 249 (498)
|++|.. +||.+ .+++++++..+...+++++|||+|++|+|+|..|+++|.+|+++++.+.+++.+++++.+.+.
T Consensus 154 Gs~p~~--~~g~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~ 231 (478)
T 1v59_A 154 GSEVTP--FPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQ 231 (478)
T ss_dssp CEEECC--CTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHH
T ss_pred CCCCCC--CCCCCCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHH
Confidence 998843 34432 478889988888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEcCccEEEEEE--eCCeEEEEEC-----CCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCC
Q 042564 250 RNLEGRGINLHPRTTIKELIK--SEEGVKVITD-----HGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDE 322 (498)
Q Consensus 250 ~~l~~~Gv~i~~~~~v~~i~~--~~~~~~v~~~-----~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~ 322 (498)
+.+++.||++++++.|.++.. +++.+.+.+. +++++++|.||+|+|++||++.+.+++.|++++++|+|.||+
T Consensus 232 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~ 311 (478)
T 1v59_A 232 KFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDD 311 (478)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCT
T ss_pred HHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECc
Confidence 999999999999999999987 4555666665 456799999999999999998544788999999889999999
Q ss_pred CCCCCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEE
Q 042564 323 NSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVF 402 (498)
Q Consensus 323 ~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~ 402 (498)
++||+.|+|||+|||+..+++++.|.+||+++|+||++.. ...+|..+|++.|++|+++++|++|+||+..|+ ++.+.
T Consensus 312 ~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~-~~~~~ 389 (478)
T 1v59_A 312 QFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGH-GHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGI-DYKIG 389 (478)
T ss_dssp TSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHTTC-CEEEE
T ss_pred CCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCCC-CCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCC-CEEEE
Confidence 9999999999999999988999999999999999999743 345788899999999999999999999998855 67777
Q ss_pred EEecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 403 TSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
..++....++.....+.+|+|+++++++++|+|++++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 469 (478)
T 1v59_A 390 KFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANM 469 (478)
T ss_dssp EEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCTTHHHHHHHH
T ss_pred EEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCCHHHHHHHHHH
Confidence 77777766665455678999999998899999999999999999999999999999999999999999999999887643
No 28
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.9e-69 Score=555.58 Aligned_cols=439 Identities=30% Similarity=0.448 Sum_probs=387.6
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhc---CC
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARS---YG 99 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~---~g 99 (498)
+|||+||||||||++||.+|++.|++|+||| +..+||+|.+.||+|+|.++..+...+.+..... +|
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie----------~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g 74 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVE----------GQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLG 74 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEEC----------SSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEc----------cCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccC
Confidence 5899999999999999999999999999999 5679999999999999999998888777766666 77
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
+... ...++|..++.+.....+.+...+...+++.+++++.+++.+++++.+.+ ++ ..++||+||||||++|+.
T Consensus 75 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v---~~--~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 75 ISVA-SPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEV---DG--QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp CCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEE---TT--EEEECSEEEECCCEEECC
T ss_pred cccC-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEE---ee--EEEEeCEEEEeCCCCCCC
Confidence 7653 46789999999998888888888888888899999999988888877665 22 479999999999999987
Q ss_pred CC-CCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCE
Q 042564 180 AP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN 258 (498)
Q Consensus 180 p~-i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 258 (498)
|+ ++....++++++++.+...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.+++++.+.+.+.+++.||+
T Consensus 149 ~~~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~ 228 (458)
T 1lvl_A 149 LPMLPLGGPVISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIA 228 (458)
T ss_dssp BTTBCCBTTEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCE
T ss_pred CCCCCccCcEecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCE
Confidence 76 55333578889998888889999999999999999999999999999999999999989999999999999999999
Q ss_pred EEcCccEEEEEEeCCeEEEEECCC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecc
Q 042564 259 LHPRTTIKELIKSEEGVKVITDHG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGD 336 (498)
Q Consensus 259 i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD 336 (498)
+++++.|.++.. + .+.+...+| +++++|.|++|+|++|+.+++.++..|++++++ +|.||+++||+.|+|||+||
T Consensus 229 i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~GD 305 (458)
T 1lvl_A 229 LHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMHNVWAIGD 305 (458)
T ss_dssp EETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSSTTEEECGG
T ss_pred EEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCCCEEEeec
Confidence 999999999976 3 355554456 589999999999999999986678889999887 89999999999999999999
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCccccccC
Q 042564 337 VTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGR 416 (498)
Q Consensus 337 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (498)
|+..+++++.|.+||+++|+||++.. ...++..+|++.|++|+++++|++|++|+..|+ ++.+....+....++....
T Consensus 306 ~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~-~~~~~~~~~~~~~~~~~~~ 383 (458)
T 1lvl_A 306 VAGEPMLAHRAMAQGEMVAEIIAGKA-RRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGL-DCIVAQFPFAANGRAMSLE 383 (458)
T ss_dssp GGCSSCCHHHHHHHHHHHHHHHTTCC-CCCCCSCCCEEECSSSEEEEEECCHHHHHHTTC-CEEEEEEEGGGCHHHHHTT
T ss_pred cCCCcccHHHHHHHHHHHHHHhcCCC-ccCCCCCCCEEEECCCCeEEEeCCHHHHHHcCC-CEEEEEEECccchhhhhcC
Confidence 99999999999999999999999743 345677899999999999999999999999865 6777777776666654456
Q ss_pred CceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 417 QEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 417 ~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
.+.+|+|+++|+++++|+|++++|+.+.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 384 ~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~ 449 (458)
T 1lvl_A 384 SKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAAL 449 (458)
T ss_dssp CCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHHHHHHHH
T ss_pred CCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999999999999999887543
No 29
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=2.5e-69 Score=554.94 Aligned_cols=444 Identities=30% Similarity=0.464 Sum_probs=395.3
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+|||+||||||||+++|.+|++.|++|+|||+ ...+||+|.+.||+|+|.++..+.....+.. ..+|+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~---------~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~ 70 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEK---------EKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKV 70 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEE
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeC---------CCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCccc
Confidence 38999999999999999999999999999994 3368999999999999999988877776665 6677664
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI 182 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~i 182 (498)
. ...++|..+..+.....+.+...+...+++.+++++.+++.+++++.+.|.+ +|. .+.||+||+|||++|..|++
T Consensus 71 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~-~g~--~~~~d~lviAtG~~p~~~~~ 146 (455)
T 2yqu_A 71 K-GVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEE-TGE--ELEARYILIATGSAPLIPPW 146 (455)
T ss_dssp C-CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETT-TCC--EEEEEEEEECCCEEECCCTT
T ss_pred C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEee-CCE--EEEecEEEECCCCCCCCCCC
Confidence 3 3567899988888877777777777778888999999998888888888865 553 79999999999999999988
Q ss_pred CCCC--cccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEE
Q 042564 183 PGQE--LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLH 260 (498)
Q Consensus 183 ~g~~--~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 260 (498)
+|.+ .++++++++.+...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.+++++.+.+.+.+++.||+++
T Consensus 147 ~g~~~~~v~~~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 226 (455)
T 2yqu_A 147 AQVDYERVVTSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIR 226 (455)
T ss_dssp BCCCSSSEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCCcCcEechHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 8865 37888998888888999999999999999999999999999999999999998999999999999999999999
Q ss_pred cCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecccCCC
Q 042564 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNR 340 (498)
Q Consensus 261 ~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~~~ 340 (498)
++++|.++..+++++.+.+.+|+++++|.||+|+|++|+.+++.++..|+.++++|+|.||++++|+.|+|||+|||+..
T Consensus 227 ~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~ 306 (455)
T 2yqu_A 227 TGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRG 306 (455)
T ss_dssp CSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSS
T ss_pred ECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCCC
Confidence 99999999988777788888888999999999999999998866788899998889999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCccccccCCcee
Q 042564 341 MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT 420 (498)
Q Consensus 341 ~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (498)
+++++.|.+||+++|+||++. ....++..+|++.|++|+++++|++|++++..|+ ++.+....+....++.....+.+
T Consensus 307 ~~~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~ 384 (455)
T 2yqu_A 307 PMLAHKASEEGIAAVEHMVRG-FGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGI-PYKVGKFPYSASGRARAMGETEG 384 (455)
T ss_dssp CCCHHHHHHHHHHHHHHHHHS-CCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTC-CEEEEEEEGGGCHHHHHHTCCCC
T ss_pred ccCHHHHHHhHHHHHHHHcCC-CccCCCCCCCEEEEcCCceEEEECCHHHHHHcCC-CEEEEEEEcccchHHHhcCCCcE
Confidence 999999999999999999974 3345667789999999999999999999998865 67777777776666555556788
Q ss_pred EEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHHH
Q 042564 421 VMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMRS 482 (498)
Q Consensus 421 ~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 482 (498)
|+|+++++++++|+|++++|+.+.|+|+.++++|++++|++||.+++++|||++|.+.++..
T Consensus 385 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~~ 446 (455)
T 2yqu_A 385 FIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAAL 446 (455)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHH
Confidence 99999999899999999999999999999999999999999999999999999999987653
No 30
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=7.1e-70 Score=567.29 Aligned_cols=441 Identities=23% Similarity=0.367 Sum_probs=374.6
Q ss_pred cCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcC
Q 042564 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSY 98 (498)
Q Consensus 19 ~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 98 (498)
.+..++||+|||||++|+++|.+|++.|++|+|||+ ...+||+|.+.||+|++.++..+.....+.....|
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~---------~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~ 109 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDR---------WPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQ 109 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeC---------CCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhc
Confidence 445679999999999999999999999999999993 22389999999999999998888777777666666
Q ss_pred Ccccccccc--cCHHHHHHHHHHHHHHHhHHHH---HHH-----HhCCcEEE-EeEEEEEeCCEEEEEeCCCceEEEEcC
Q 042564 99 GWEVHEKID--FDWKKLLQKKTDEILRLNGIYK---RLL-----SNAGVKLY-EGEGKIVGPNEVEVTQLDGTKLSYSAK 167 (498)
Q Consensus 99 g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~gv~~~-~~~~~~i~~~~~~v~~~~g~~~~~~~d 167 (498)
++ +..... +....+ ...+...+. ..+ .+.+++++ .+.+.+++++.+.+ ++. .+.||
T Consensus 110 g~-~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~---~g~--~~~~d 176 (523)
T 1mo9_A 110 YW-FPDMTEKVVGIKEV-------VDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEA---AGK--VFKAK 176 (523)
T ss_dssp TT-CCCCTTCCCCHHHH-------HHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEE---TTE--EEEBS
T ss_pred Cc-HHHHHhhhhhHHHH-------HHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEE---CCE--EEEeC
Confidence 64 111000 012222 222222222 444 67799998 77888888877665 243 79999
Q ss_pred eEEEcCCCCCCCCCCCCCCc--ccChHHHh-ccccCC-CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHH
Q 042564 168 HILIATGSRAQRAPIPGQEL--AITSDEAL-SLEELP-KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDE 243 (498)
Q Consensus 168 ~liiAtG~~p~~p~i~g~~~--~~~~~~~~-~l~~~~-~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~ 243 (498)
+||+|||+.|..|+++|.+. ++++++++ .+...+ ++++|||+|++|+|+|..+.++|.+|+++++.+.+++.++++
T Consensus 177 ~lViATGs~p~~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~ 256 (523)
T 1mo9_A 177 NLILAVGAGPGTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNE 256 (523)
T ss_dssp CEEECCCEECCCCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHH
T ss_pred EEEECCCCCCCCCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHH
Confidence 99999999999999999864 67888888 787788 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCEEEcCccEEEEEEeCCe----EEEEECCCe-EEEcCEEEEecCCCcCCC-CCCcccCCceeCCCCC
Q 042564 244 MRAVVARNLEGRGINLHPRTTIKELIKSEEG----VKVITDHGE-EIVADVVLFATGRAPNTK-RLNLKAVGVEVDQTGA 317 (498)
Q Consensus 244 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~----~~v~~~~g~-~i~~D~vi~a~G~~p~~~-~l~l~~~gi~~~~~g~ 317 (498)
+.+.+.+.+++.||++++++.|.++..++++ +.+.+.+|+ ++++|.||+|+|++|+++ + ++.+|++++++|+
T Consensus 257 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~--l~~~gl~~~~~G~ 334 (523)
T 1mo9_A 257 TRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAEL--AKILGLDLGPKGE 334 (523)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHH--HHHHTCCBCTTSC
T ss_pred HHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccC--HHHcCCccCCCCC
Confidence 9999999999999999999999999875555 678888887 899999999999999997 4 6788999998899
Q ss_pred eEcCCCCCCCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCC
Q 042564 318 VKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKG 397 (498)
Q Consensus 318 i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~ 397 (498)
|.||+++||++|+|||+|||++.+++++.|.+||+++|+||++.. ...++..+|+++|++|++++||+||++|+..|+
T Consensus 335 i~Vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~- 412 (523)
T 1mo9_A 335 VLVNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEK-ISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGH- 412 (523)
T ss_dssp BCCCTTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCC-CCCCCCSCCEEEESSSEEEEEECCHHHHHHTTC-
T ss_pred EEECCCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCC-CCCCCCCCCeEEECCCceEEEeCCHHHHHhCCC-
Confidence 999999999999999999999988999999999999999999843 344577899999999999999999999999865
Q ss_pred CEEEEEEecCC--------------Ccccccc--CCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHH
Q 042564 398 DILVFTSSFNP--------------MRNTISG--RQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKA 461 (498)
Q Consensus 398 ~~~~~~~~~~~--------------~~~~~~~--~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~ 461 (498)
++.+....+.. ..++... ..+.+|+|+++|+++++|+|+|++|+++.|+|+.++++|++++|++
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~ 492 (523)
T 1mo9_A 413 EIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVD 492 (523)
T ss_dssp CEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHH
T ss_pred CEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 68887777765 3444444 5667999999999999999999999999999999999999999999
Q ss_pred HHhcC--cCCCCChhHHHHHHHHHHH
Q 042564 462 QFDST--VGIHPSSAEEFVTMRSVTR 485 (498)
Q Consensus 462 ~l~~~--~~~~pt~~e~~~~~~~~~~ 485 (498)
||.++ +++|||++|.+.+++...|
T Consensus 493 ~l~~~~~~~~~Pt~~e~~~~~~~~~~ 518 (523)
T 1mo9_A 493 ELGDMDELFLNPTHFIQLSRLRAGSK 518 (523)
T ss_dssp HHHTSCCCSSCSCCHHHHHHHHTTCS
T ss_pred HHHhCCcceECCCHHHHHHHHHHhhH
Confidence 99999 9999999999987765444
No 31
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=9.5e-68 Score=560.96 Aligned_cols=459 Identities=36% Similarity=0.635 Sum_probs=391.7
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
..+|||+||||||||++||.+|++.|++|+|||+.... .....+.+||+|.+.||+|++.+...+.....+.+...||+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~-~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~ 183 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPT-PIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGW 183 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCC-TTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCc-ccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCc
Confidence 34699999999999999999999999999999941100 00112358999999999999999988887777778888887
Q ss_pred ccccc-cccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 101 EVHEK-IDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 101 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
..... ...+|..+..+....+..+...+...+...+|+++.+.+.+++++.+.+...+|+...+.||+||||||++|+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~ 263 (598)
T 2x8g_A 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKY 263 (598)
T ss_dssp CCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCC
Confidence 65432 57899999998888888777666667778899999999999999999888777644579999999999999999
Q ss_pred CCCCCCC-cccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCE
Q 042564 180 APIPGQE-LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGIN 258 (498)
Q Consensus 180 p~i~g~~-~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~ 258 (498)
|++||.+ ..+++++++.+...+++++|||+|++|+|+|..|+++|.+|+++++. .+++.+++++.+.+.+.+++.||+
T Consensus 264 p~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~ 342 (598)
T 2x8g_A 264 PEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGVK 342 (598)
T ss_dssp CSSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCCE
Confidence 9999964 35677788877778899999999999999999999999999999998 677889999999999999999999
Q ss_pred EEcCccEEEEEEe------C---CeEEEE--ECCCeEEE--cCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCC
Q 042564 259 LHPRTTIKELIKS------E---EGVKVI--TDHGEEIV--ADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSR 325 (498)
Q Consensus 259 i~~~~~v~~i~~~------~---~~~~v~--~~~g~~i~--~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~ 325 (498)
+++++.+.++... + +.+.+. ..+|++++ +|.||+|+|++||++++.++..|++++++|+|.||++++
T Consensus 343 i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~ 422 (598)
T 2x8g_A 343 FAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQ 422 (598)
T ss_dssp EEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTSB
T ss_pred EEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCCc
Confidence 9999988888643 1 334343 46776655 999999999999998876788899999899999999999
Q ss_pred CCCCCeEEecccC-CCCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHc-CCCCEEEEE
Q 042564 326 TNVPSIWAVGDVT-NRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQ-GKGDILVFT 403 (498)
Q Consensus 326 t~~~~iya~GD~~-~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~-~~~~~~~~~ 403 (498)
|++|+|||+|||+ +.+.+++.|.+||+++|+||++......+|..+|+++|++|+++++|+||++|+.+ +..++.++.
T Consensus 423 ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~ 502 (598)
T 2x8g_A 423 TTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYH 502 (598)
T ss_dssp CSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEE
T ss_pred CCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEECCCceEEEeCCHHHHHhhCCCCcEEEEE
Confidence 9999999999995 45789999999999999999976666678889999999999999999999999876 222477887
Q ss_pred EecCCCccccccC-CceeEEEEEEEC-CCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHHHH
Q 042564 404 SSFNPMRNTISGR-QEKTVMKLVVDA-ETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVTMR 481 (498)
Q Consensus 404 ~~~~~~~~~~~~~-~~~~~~kl~~~~-~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~ 481 (498)
..+.+..++.... ...+|+|+++++ ++++|+|+|++|+++.|+|+.++++|++++|++||.+++++|||++|.+.++.
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 582 (598)
T 2x8g_A 503 SNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTTLH 582 (598)
T ss_dssp EEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCC
T ss_pred EeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCCHHHHHHHHH
Confidence 7787766665443 367999999995 68999999999999999999999999999999999999999999999887643
No 32
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.8e-61 Score=492.56 Aligned_cols=400 Identities=16% Similarity=0.226 Sum_probs=315.9
Q ss_pred cEEEECCChhHHHHHHHHHhCC--CcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 25 DLFVIGAGSGGVRAARFSANFG--AKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 25 dvvIIGgG~aGl~aA~~l~~~g--~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+||||||||||++||.+|++.| .+|+|||+ .+ . .|..+.|+|+.. .... ...
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~------~~---~---~~~~~~~l~~~~----~~~~----------~~~ 55 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEK------DR---D---MSFANCALPYVI----GEVV----------EDR 55 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEES------SS---C---SSBCGGGHHHHH----TTSS----------CCG
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeC------CC---C---CCCCcchhHHHH----cCCc----------cch
Confidence 6999999999999999999977 57999994 21 1 122333566311 0000 000
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCCE--EEEEe-CCCceEEEEcCeEEEcCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPNE--VEVTQ-LDGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~~--~~v~~-~~g~~~~~~~d~liiAtG~~p~ 178 (498)
........ +.++++.++++..++ +..+|... +.+.. ..++..++.||+||||||++|+
T Consensus 56 ~~~~~~~~------------------~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 56 RYALAYTP------------------EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp GGTBCCCH------------------HHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEEC
T ss_pred hhhhhcCH------------------HHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccc
Confidence 00001111 122344689988875 66777654 33333 2344567999999999999999
Q ss_pred CCCCCCCCc--ccChHHHhccc-----cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHH
Q 042564 179 RAPIPGQEL--AITSDEALSLE-----ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARN 251 (498)
Q Consensus 179 ~p~i~g~~~--~~~~~~~~~l~-----~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~ 251 (498)
.|+++|... ..+.++...+. ..+++++|||+|++|+|+|..++++|.+|+++++.+++++.+|+++.+.+.+.
T Consensus 118 ~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~ 197 (437)
T 4eqs_A 118 SLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDE 197 (437)
T ss_dssp CCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHH
T ss_pred cccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHH
Confidence 999988532 33445444432 34789999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCe
Q 042564 252 LEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSI 331 (498)
Q Consensus 252 l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~i 331 (498)
++++||++++++.|.++... .+++++|+++++|.|++|+|++||+++ ++..|++++++|+|.||+++||++|||
T Consensus 198 l~~~gV~i~~~~~v~~~~~~----~v~~~~g~~~~~D~vl~a~G~~Pn~~~--~~~~gl~~~~~G~I~vd~~~~Ts~p~I 271 (437)
T 4eqs_A 198 LDKREIPYRLNEEINAINGN----EITFKSGKVEHYDMIIEGVGTHPNSKF--IESSNIKLDRKGFIPVNDKFETNVPNI 271 (437)
T ss_dssp HHHTTCCEEESCCEEEEETT----EEEETTSCEEECSEEEECCCEEESCGG--GTTSSCCCCTTSCEECCTTCBCSSTTE
T ss_pred hhccceEEEeccEEEEecCC----eeeecCCeEEeeeeEEEEeceecCcHH--HHhhhhhhccCCcEecCCCccCCCCCE
Confidence 99999999999999988532 377899999999999999999999987 678899999999999999999999999
Q ss_pred EEecccCCC----------CCChHHHHHHHHHHHHHHhCCCCC-CCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCCEE
Q 042564 332 WAVGDVTNR----------MNLTPVALMEGTCFAKTVFGGQPC-KPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDIL 400 (498)
Q Consensus 332 ya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~~~ 400 (498)
||+|||++. +++++.|.+||+++|+||+|.+.. ..++..+|++.|++|++++||+||+||++.++ +
T Consensus 272 yA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~---~ 348 (437)
T 4eqs_A 272 YAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDY---K 348 (437)
T ss_dssp EECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSCE---E
T ss_pred EEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCCc---e
Confidence 999999863 467899999999999999987653 44667789999999999999999999987643 3
Q ss_pred EEEEecCCCccccccCCceeEEEEEEECCCCeEEEEEEECC-ChhHHHHHHHHHHHCCCCHHHHhcCcCC-CCChhHHHH
Q 042564 401 VFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGP-EAPEIMQGIAVALKCGATKAQFDSTVGI-HPSSAEEFV 478 (498)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~-~a~~~i~~~~~~i~~~~~~~~l~~~~~~-~pt~~e~~~ 478 (498)
+....+....+.+ ...+++|+|+++|+++++|||+|++|+ .|.|+|+.+++||++++|++||.++.+. ||++++.+.
T Consensus 349 ~~~~~~~~~~~~~-~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~~d 427 (437)
T 4eqs_A 349 MVEVTQGAHANYY-PGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHPKD 427 (437)
T ss_dssp EEEEEEESSCTTS-SSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSC
T ss_pred EEEEecCCchhhc-CCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCchHH
Confidence 3333333333333 356789999999999999999999998 4999999999999999999999999765 899998653
No 33
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.2e-59 Score=480.24 Aligned_cols=415 Identities=25% Similarity=0.342 Sum_probs=326.9
Q ss_pred CccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
++||+|||||+||+++|..|++. |.+|+|||+ .+ .+++. ...+|..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~------~~---~~~~~---~~~~p~~-------------------- 50 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEA------TE---WVSHA---PCGIPYV-------------------- 50 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS------SS---CCC--------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEEC------CC---ccccC---CcCCccc--------------------
Confidence 47999999999999999999996 889999994 21 11110 0012210
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEe-EEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
..+ ..++..+..+ ..+.+.++.+++++.+ ++..++...+.+.+.++ ...+.||+||+|||++|+.
T Consensus 51 -~~~--~~~~~~~~~~----------~~~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g-~~~~~~d~lviAtG~~p~~ 116 (449)
T 3kd9_A 51 -VEG--LSTPDKLMYY----------PPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGG-EKSYEWDYLVFANGASPQV 116 (449)
T ss_dssp ----------------------------CTHHHHTTCEEETTCEEEEECSSEEEEECSSS-EEEEECSEEEECCCEEECC
T ss_pred -cCC--CCCHHHhhhc----------CHHHHHHhcCcEEEecCEEEEEecCCCEEEECCc-eEEEEcCEEEECCCCCCCC
Confidence 000 0001111110 0112234679999998 58889998888877654 3579999999999999999
Q ss_pred CCCCCCCc--c---cChHHHhcccc-----CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-CCHHHHHHH
Q 042564 180 APIPGQEL--A---ITSDEALSLEE-----LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-FDDEMRAVV 248 (498)
Q Consensus 180 p~i~g~~~--~---~~~~~~~~l~~-----~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l 248 (498)
|++||.+. + .+.++...+.. .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+
T Consensus 117 p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l 196 (449)
T 3kd9_A 117 PAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDIL 196 (449)
T ss_dssp CSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHH
T ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHH
Confidence 99998753 2 24445444332 4679999999999999999999999999999999999988 999999999
Q ss_pred HHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCC
Q 042564 249 ARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNV 328 (498)
Q Consensus 249 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~ 328 (498)
.+.+++. |++++++.+.++..++ .+.....+++++++|.||+|+|++|+.++ ++.+|++++++|+|.||+++||++
T Consensus 197 ~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~~~G~i~vd~~~~t~~ 272 (449)
T 3kd9_A 197 EEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKPNIEL--AKQLGVRIGETGAIWTNEKMQTSV 272 (449)
T ss_dssp HHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEECCHH--HHHTTCCBCTTSSBCCCTTCBCSS
T ss_pred HHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCccCHHH--HHhCCccCCCCCCEEECCCCccCC
Confidence 9999999 9999999999997654 33333557788999999999999999986 678899999999999999999999
Q ss_pred CCeEEecccCC-------C---CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCC
Q 042564 329 PSIWAVGDVTN-------R---MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGD 398 (498)
Q Consensus 329 ~~iya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~ 398 (498)
|+|||+|||+. . +++++.|.+||+++|+||+|.......+..+|++.|++|+++++|+||+||+++|+ +
T Consensus 273 ~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~-~ 351 (449)
T 3kd9_A 273 ENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGY-D 351 (449)
T ss_dssp TTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC-C
T ss_pred CCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHHCCC-c
Confidence 99999999984 2 57899999999999999998765554556778999999999999999999999865 4
Q ss_pred EEEEEEecCCCcccccc-CCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcC-cCCCCChhHH
Q 042564 399 ILVFTSSFNPMRNTISG-RQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDST-VGIHPSSAEE 476 (498)
Q Consensus 399 ~~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~-~~~~pt~~e~ 476 (498)
+.+.... ...++... ..+.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.++ +++||+++|.
T Consensus 352 ~~~~~~~--~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~ 429 (449)
T 3kd9_A 352 VRTAFIK--ASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPV 429 (449)
T ss_dssp EEEEEEE--EESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCS
T ss_pred eEEEEEe--cCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCCc
Confidence 5444332 23333222 457899999999999999999999999999999999999999999999998 6689999998
Q ss_pred HHHHHHHHHHHhcc
Q 042564 477 FVTMRSVTRRVAAA 490 (498)
Q Consensus 477 ~~~~~~~~~~~~~~ 490 (498)
+..+..++++...|
T Consensus 430 ~~~~~~~~~~~~~~ 443 (449)
T 3kd9_A 430 WDPLIVLARVLKEG 443 (449)
T ss_dssp SCHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHhhc
Confidence 77766666666544
No 34
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=1.7e-59 Score=481.33 Aligned_cols=408 Identities=21% Similarity=0.260 Sum_probs=318.0
Q ss_pred ccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
+||+|||||+||++||.+|++. |.+|+|||+ .+ .+ ||.|............
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~------~~---~~-------g~~~~~~~~~~~~~~~----------- 55 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDK------QA---TV-------GYLSGGLSAYFNHTIN----------- 55 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECS------SS---CC-------SSCCC----------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC------CC---CC-------cccCccchhhhcCCCC-----------
Confidence 5999999999999999999997 899999994 21 11 1233222111110000
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCC--EEEEEeCCCceEEEEcCeEEEcCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPN--EVEVTQLDGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~--~~~v~~~~g~~~~~~~d~liiAtG~~p~ 178 (498)
++. .+.......+.+.+++++.+. +..++.. .+.+...+ ....+.||++|+|||++|.
T Consensus 56 -------~~~-----------~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~-~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 56 -------ELH-----------EARYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKE-EQQWYSYDKLILATGASQF 116 (452)
T ss_dssp -----------------------CCCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETT-EEEEEECSEEEECCCCCBC
T ss_pred -------CHH-----------HhhcCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecC-ceEEEEcCEEEECCCcccC
Confidence 000 000001223455788887654 6666654 45554222 3458999999999999999
Q ss_pred CCCCCCCCc--ccChHH------HhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-CCHHHHHHHH
Q 042564 179 RAPIPGQEL--AITSDE------ALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-FDDEMRAVVA 249 (498)
Q Consensus 179 ~p~i~g~~~--~~~~~~------~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~ 249 (498)
.|++||.+. +++..+ +..+...+++++|||+|++|+|+|..|.++|.+|+++++.+.+++. +++++.+.+.
T Consensus 117 ~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~ 196 (452)
T 3oc4_A 117 STQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQ 196 (452)
T ss_dssp CCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHH
Confidence 999998753 333322 2233456899999999999999999999999999999999999986 8999999999
Q ss_pred HHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCC
Q 042564 250 RNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVP 329 (498)
Q Consensus 250 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~ 329 (498)
+.+++.||++++++.|.++..+++++.+.++++ ++++|.||+|+|++|+++++ +.. +.++++|+|.||+++||++|
T Consensus 197 ~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l--~~~-~~~~~~g~i~vd~~~~t~~~ 272 (452)
T 3oc4_A 197 KSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQLAYL--DKK-IQRNLDQTIAVDAYLQTSVP 272 (452)
T ss_dssp HHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCCSSC--CTT-SCBCTTSCBCCCTTCBCSST
T ss_pred HHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCChHHH--Hhh-hccCCCCCEEECcCccCCCC
Confidence 999999999999999999987666677778777 89999999999999999974 433 78888999999999999999
Q ss_pred CeEEecccCCC----------CCChHHHHHHHHHHHHHHhCCCCCCC-CCCCCcEEEeccCCeeEeeCCHHHHHHcCCCC
Q 042564 330 SIWAVGDVTNR----------MNLTPVALMEGTCFAKTVFGGQPCKP-DYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGD 398 (498)
Q Consensus 330 ~iya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~-~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~ 398 (498)
+|||+|||++. +++++.|..||+++|+||++...... .+..+|+++|+ +++++||+||+||++.|+ +
T Consensus 273 ~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~-~~~a~vG~te~~a~~~g~-~ 350 (452)
T 3oc4_A 273 NVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVGD-YYLASTGLTETEGLFFPQ-T 350 (452)
T ss_dssp TEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCEEEEETT-EEEEEEECCSGGGGGSSS-C
T ss_pred CEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccEEEEEcC-eeEEEecCCHHHHHHCCC-c
Confidence 99999999975 36899999999999999998654433 56678889996 799999999999998755 5
Q ss_pred EEEEEEecCCCccccccCCceeEEEEEEECCCCeEEEEEEECC-ChhHHHHHHHHHHHCCCCHHHHhcC-cCCCCChhHH
Q 042564 399 ILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGP-EAPEIMQGIAVALKCGATKAQFDST-VGIHPSSAEE 476 (498)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~-~a~~~i~~~~~~i~~~~~~~~l~~~-~~~~pt~~e~ 476 (498)
+.+....+.. +++ ...+.+|+|+++++++++|||+|++|+ +|.|+|+.+++||++++|++||.++ +++|||++|.
T Consensus 351 ~~~~~~~~~~--~~~-~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~ 427 (452)
T 3oc4_A 351 LASIIVRQPA--PPL-QHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNI 427 (452)
T ss_dssp EEEEEEEEEC--TTT-TCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCS
T ss_pred eEEEEEecCC--ccC-CCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCc
Confidence 6655544432 222 245789999999999999999999999 7999999999999999999999998 8999999997
Q ss_pred HHHHHHHHHH
Q 042564 477 FVTMRSVTRR 486 (498)
Q Consensus 477 ~~~~~~~~~~ 486 (498)
+.-+..++++
T Consensus 428 ~~~~~~a~~~ 437 (452)
T 3oc4_A 428 YDITNLMGAS 437 (452)
T ss_dssp SCHHHHHHHH
T ss_pred hhHHHHHHHH
Confidence 6654444433
No 35
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=3.8e-59 Score=481.44 Aligned_cols=420 Identities=22% Similarity=0.285 Sum_probs=304.9
Q ss_pred CccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCc-hhhHHHHHHhHhhHHHhhhhcCC
Q 042564 23 DFDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGC-VPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~-~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
++||+|||||+||+++|..|++. |.+|+|||+ .+.. + +..| +|.. .
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~------~~~~---~----~~~~gl~~~----~-------------- 51 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQ------ASRI---S----YGGCGIPYY----V-------------- 51 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECC------C---------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEEC------CCcc---c----ccccccchh----h--------------
Confidence 36999999999999999999997 899999994 2111 1 1111 1210 0
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCC--EEEEEe-CCCceEEEEcCeEEEcCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPN--EVEVTQ-LDGTKLSYSAKHILIATGS 175 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~--~~~v~~-~~g~~~~~~~d~liiAtG~ 175 (498)
.+ ...+...+.... ..+....+.+.++.++++..+. +..++.. .+.+.. .+|....+.||+||+|||+
T Consensus 52 ---~g-~~~~~~~~~~~~----~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 52 ---SG-EVSNIESLQATP----YNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp -------------------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ---cC-CCCchHHhcccc----chhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 00 000000000000 0011112223334688887654 6667654 455543 2355568999999999999
Q ss_pred CCCCCCCCCCCc-----ccChHHHhccc-----cCCCeEEEEcCCHHHHHHHHHHHHC-CCcEEEEeeCCCCCC-CCCHH
Q 042564 176 RAQRAPIPGQEL-----AITSDEALSLE-----ELPKRAVVLGGGYIAVEFASIWRGM-GSTVDLLFRKELPLR-GFDDE 243 (498)
Q Consensus 176 ~p~~p~i~g~~~-----~~~~~~~~~l~-----~~~~~v~ViG~G~~g~e~a~~l~~~-g~~V~lv~~~~~~l~-~~~~~ 243 (498)
+|..|++||.+. ..+.++...+. ..+++++|||+|++|+|+|..+.++ |.+|+++++.+.+++ .++++
T Consensus 124 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~ 203 (472)
T 3iwa_A 124 KANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKS 203 (472)
T ss_dssp EECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHH
T ss_pred CcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHH
Confidence 999999998752 23445544443 4579999999999999999999999 999999999999998 79999
Q ss_pred HHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCC
Q 042564 244 MRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDEN 323 (498)
Q Consensus 244 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~ 323 (498)
+.+.+.+.+++.||++++++.|.++..+++.+.+.+.+|+++++|.||+|+|++|+.++ +++.|++++++|+|.||++
T Consensus 204 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~~~g~i~vd~~ 281 (472)
T 3iwa_A 204 LSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQL--ARDAGLELDPRGAIIVDTR 281 (472)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHH--HHHHTCCBCTTCCEECCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHH--HHhCCccCCCCCCEEECCC
Confidence 99999999999999999999999998866677788889989999999999999999986 5778999999999999999
Q ss_pred CCCCCCCeEEecccC-------CC---CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHH
Q 042564 324 SRTNVPSIWAVGDVT-------NR---MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIE 393 (498)
Q Consensus 324 ~~t~~~~iya~GD~~-------~~---~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~ 393 (498)
+||++|||||+|||+ +. +++++.|.+||+++|+||+|...........++..|++|+++++|+||+||++
T Consensus 282 ~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~ 361 (472)
T 3iwa_A 282 MRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALR 361 (472)
T ss_dssp CBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHH
T ss_pred cccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCHHHHHH
Confidence 999999999999998 32 46889999999999999998655433333344567889999999999999999
Q ss_pred cCCCCEEEEEEecCCCcccccc-CCceeEEEEEEECCCCeEEEEEEECC---ChhHHHHHHHHHHHCCCCHHHHhcCcCC
Q 042564 394 QGKGDILVFTSSFNPMRNTISG-RQEKTVMKLVVDAETEKVLGASMCGP---EAPEIMQGIAVALKCGATKAQFDSTVGI 469 (498)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~i~G~~~~g~---~a~~~i~~~~~~i~~~~~~~~l~~~~~~ 469 (498)
+|+ ++.+... ....++... ..+.+|+|+++|+++++|||+|++|+ .+.|+|+.+++||++++|++||.+++++
T Consensus 362 ~g~-~~~~~~~--~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~ 438 (472)
T 3iwa_A 362 EGY-DAVNVHV--EQFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVV 438 (472)
T ss_dssp TTC-CEEEEEE--EC-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC
T ss_pred cCC-ceEEEEE--ecCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhccccc
Confidence 865 5554443 333444333 56789999999999999999999999 4589999999999999999999999999
Q ss_pred C-CChhHHHHHHHHHHHH
Q 042564 470 H-PSSAEEFVTMRSVTRR 486 (498)
Q Consensus 470 ~-pt~~e~~~~~~~~~~~ 486 (498)
| ||++|.+..+..++..
T Consensus 439 ~~P~~~~~~~~~~~~~~~ 456 (472)
T 3iwa_A 439 YSPPFASAMDIVNVAGNV 456 (472)
T ss_dssp --------CCHHHHHHHH
T ss_pred CCCCCCCcccHHHHHHHH
Confidence 8 9999987655444433
No 36
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=3.4e-57 Score=464.37 Aligned_cols=412 Identities=20% Similarity=0.278 Sum_probs=318.6
Q ss_pred ccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
+||+|||||+||+++|..|++. |.+|+|||+ .+ .. .+.+| ......... ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~------~~---~~----~~~~~---~~~~~~~g~-----------~~ 53 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEM------ND---NI----SFLSC---GIALYLGKE-----------IK 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEES------SS---CC----CBCGG---GHHHHHTTC-----------BG
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC------CC---CC----Ccccc---cchhhhcCC-----------cc
Confidence 5899999999999999999997 999999994 11 11 12222 111111000 00
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEeC-CCceEEEEcCeEEEcCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQL-DGTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~~-~g~~~~~~~d~liiAtG~~p 177 (498)
.+++..+ .......+.+.+++++.++ +..++ ++.+.+... +++...++||+||+|||++|
T Consensus 54 -----~~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 54 -----NNDPRGL-----------FYSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp -----GGCGGGG-----------BSCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred -----cCCHHHh-----------hhcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCc
Confidence 0011111 0011223455789998876 66665 456666542 23345799999999999999
Q ss_pred CCCCCCCCCc--ccC------hHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC-CCCHHHHHHH
Q 042564 178 QRAPIPGQEL--AIT------SDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR-GFDDEMRAVV 248 (498)
Q Consensus 178 ~~p~i~g~~~--~~~------~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~-~~~~~~~~~l 248 (498)
+.|++||.+. +++ ..++......+++++|||+|++|+|+|..|.++|.+|+++++.+.+++ .+++++.+.+
T Consensus 118 ~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l 197 (452)
T 2cdu_A 118 TVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDIL 197 (452)
T ss_dssp CCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHH
T ss_pred CCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHH
Confidence 9999998742 332 223344445689999999999999999999999999999999999988 5999999999
Q ss_pred HHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCC
Q 042564 249 ARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNV 328 (498)
Q Consensus 249 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~ 328 (498)
.+.+++.||++++++.|.++..+++.+.....+|+++++|.||+|+|++|++++ ++.. ++++++|+|.||+++||++
T Consensus 198 ~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~l--l~~~-l~~~~~G~i~Vd~~~~t~~ 274 (452)
T 2cdu_A 198 AKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTEL--LKGK-VAMLDNGAIITDEYMHSSN 274 (452)
T ss_dssp HHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCGG--GTTT-SCBCTTSCBCCCTTSBCSS
T ss_pred HHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHHH--HHHh-hhcCCCCCEEECCCcCcCC
Confidence 999999999999999999998755555433347888999999999999999986 5666 8888889999999999999
Q ss_pred CCeEEecccCCC----------CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCCCC
Q 042564 329 PSIWAVGDVTNR----------MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGD 398 (498)
Q Consensus 329 ~~iya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~~~ 398 (498)
|+|||+|||+.. +++++.|.+||+++|+||++.......+...++..|++|+++++|++|++|+..|+ +
T Consensus 275 ~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~-~ 353 (452)
T 2cdu_A 275 RDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGINTALAKANNL-K 353 (452)
T ss_dssp TTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC-C
T ss_pred CCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccceEEEEECCeeeEeecCCHHHHHHcCC-c
Confidence 999999999973 46899999999999999998643334445567777779999999999999998765 4
Q ss_pred EEEEEEecCCCcccccc-CCceeEEEEEEECCCCeEEEEEEECC-ChhHHHHHHHHHHHCCCCHHHHhcC-cCCCCChhH
Q 042564 399 ILVFTSSFNPMRNTISG-RQEKTVMKLVVDAETEKVLGASMCGP-EAPEIMQGIAVALKCGATKAQFDST-VGIHPSSAE 475 (498)
Q Consensus 399 ~~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~i~G~~~~g~-~a~~~i~~~~~~i~~~~~~~~l~~~-~~~~pt~~e 475 (498)
+.+.. +....++... ..+.+|+|+++++++++|+|++++|+ ++.|+|+.++++|++++|++||..+ +++|||++|
T Consensus 354 ~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e 431 (452)
T 2cdu_A 354 VSEVI--IADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDR 431 (452)
T ss_dssp CEEEE--EEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCC
T ss_pred eEEEE--EecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCc
Confidence 44432 3333333322 34678999999988999999999999 8999999999999999999999986 899999999
Q ss_pred HHHHHHHHH
Q 042564 476 EFVTMRSVT 484 (498)
Q Consensus 476 ~~~~~~~~~ 484 (498)
.+..+..++
T Consensus 432 ~~~~~~~aa 440 (452)
T 2cdu_A 432 PFNYLNILG 440 (452)
T ss_dssp SSCHHHHHH
T ss_pred hHHHHHHHH
Confidence 876654443
No 37
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.2e-57 Score=471.91 Aligned_cols=409 Identities=22% Similarity=0.286 Sum_probs=315.2
Q ss_pred CccEEEECCChhHHHHHHHHHhCC---CcEEEEccCCCCCCCCcCCCccccccccCc-hhhHHHHHHhHhhHHHhhhhcC
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFG---AKVGICELPFHPISSEVIGGVGGTCVIRGC-VPKKILVYGASFGGELEDARSY 98 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g---~~V~lvek~~~~~~~~~~~~~GG~~~~~g~-~p~~~l~~~~~~~~~~~~~~~~ 98 (498)
++||+|||||+||+++|..|++.| .+|+|||+ .+ .. .+.+| +| ......
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~------~~---~~----~~~~~~~~----~~~~~~---------- 87 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQ------NS---NI----SFLGAGMA----LWIGEQ---------- 87 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECS------SS---CC----SBCGGGHH----HHHTTS----------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEC------CC---CC----Cccccccc----hhhcCc----------
Confidence 589999999999999999999987 99999994 11 11 12233 11 000000
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEeCCCceEEEEcCeEEEcCCC
Q 042564 99 GWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQLDGTKLSYSAKHILIATGS 175 (498)
Q Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~~~g~~~~~~~d~liiAtG~ 175 (498)
.. ++..+ .......+.+.+++++.+. +..++ ++.+.+.. +++..+++||+||||||+
T Consensus 88 -~~-------~~~~~-----------~~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 88 -IA-------GPEGL-----------FYSDKEELESLGAKVYMESPVQSIDYDAKTVTALV-DGKNHVETYDKLIFATGS 147 (490)
T ss_dssp -SS-------CSGGG-----------BSCCHHHHHHTTCEEETTCCEEEEETTTTEEEEEE-TTEEEEEECSEEEECCCE
T ss_pred -cC-------CHHHh-----------hhcCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEe-CCcEEEEECCEEEECCCC
Confidence 00 00000 0001123345789987766 66776 44555542 333457999999999999
Q ss_pred CCCCCCCCCCC-------------cccC------hHHHhccc--cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 176 RAQRAPIPGQE-------------LAIT------SDEALSLE--ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 176 ~p~~p~i~g~~-------------~~~~------~~~~~~l~--~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
+|..|++||.+ .+++ ..++.+.. ..+++++|||+|++|+|+|..|+++|.+|+++++.+
T Consensus 148 ~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 148 QPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp EECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 99999998875 2322 22333333 568999999999999999999999999999999999
Q ss_pred CCCC-CCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeC
Q 042564 235 LPLR-GFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVD 313 (498)
Q Consensus 235 ~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~ 313 (498)
.+++ .+++++.+.+.+.+++.||++++++.|.++..++....+.+ +|+++++|.||+|+|++|++++ ++.. ++++
T Consensus 228 ~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~l--l~~~-l~~~ 303 (490)
T 2bc0_A 228 TCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTTL--GNGK-IDLF 303 (490)
T ss_dssp STTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCGG--GTTC-SCBC
T ss_pred chhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChHH--HHhh-hccC
Confidence 9988 59999999999999999999999999999976332223555 6778999999999999999986 4555 7888
Q ss_pred CCCCeEcCCCCCCCCCCeEEecccCCC----------CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeE
Q 042564 314 QTGAVKVDENSRTNVPSIWAVGDVTNR----------MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSV 383 (498)
Q Consensus 314 ~~g~i~vd~~~~t~~~~iya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (498)
++|+|.||+++||+.|+|||+|||+.. +++++.|.+||+++|+||++.......+...++..+++|++++
T Consensus 304 ~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (490)
T 2bc0_A 304 RNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVS 383 (490)
T ss_dssp TTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEE
T ss_pred CCCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCcEeEE
Confidence 889999999999999999999999973 4689999999999999999854333444456665556899999
Q ss_pred eeCCHHHHHHcCCCCEEEEEEecCCCcccccc--CCceeEEEEEEECCCCeEEEEEEECC-ChhHHHHHHHHHHHCCCCH
Q 042564 384 VGLSEEQAIEQGKGDILVFTSSFNPMRNTISG--RQEKTVMKLVVDAETEKVLGASMCGP-EAPEIMQGIAVALKCGATK 460 (498)
Q Consensus 384 vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~kl~~~~~~~~i~G~~~~g~-~a~~~i~~~~~~i~~~~~~ 460 (498)
+|++|++|+..|+ ++.+. .+....++... ..+.+|+|+++++++++|+|++++|+ ++.|+|+.++++|++++|+
T Consensus 384 vG~~~~~a~~~g~-~~~~~--~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~ 460 (490)
T 2bc0_A 384 TGLTLEKAKRLGF-DAAVT--EYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTI 460 (490)
T ss_dssp EECCHHHHHHTTC-CEEEE--EEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBH
T ss_pred eeCCHHHHHHcCC-ceEEE--EEecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCH
Confidence 9999999998765 45443 23333333322 25678999999998999999999999 8999999999999999999
Q ss_pred HHHhcC-cCCCCChhHHHHHHHHHHH
Q 042564 461 AQFDST-VGIHPSSAEEFVTMRSVTR 485 (498)
Q Consensus 461 ~~l~~~-~~~~pt~~e~~~~~~~~~~ 485 (498)
+||.++ +++|||++|.+..+..+++
T Consensus 461 ~~l~~~~~~~~Pt~~e~~~~~~~~~~ 486 (490)
T 2bc0_A 461 EKLALTDIFFLPHFNKPYNYITMAAL 486 (490)
T ss_dssp HHHHHSCCCCCTTTCCTTCHHHHHHH
T ss_pred HHHhhcceecCCCCCchhHHHHHHHH
Confidence 999997 8999999999877655554
No 38
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=2.8e-57 Score=467.92 Aligned_cols=415 Identities=21% Similarity=0.279 Sum_probs=321.9
Q ss_pred CccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
++||+|||||+||+++|..|++. |.+|+|||+ .+..+ +..|. +|.. .. +
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~------~~~~~--~~~~~----~~~~----~~------------~- 86 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEK------GEIYS--YAQCG----LPYV----IS------------G- 86 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS------SSCCS--BCGGG----HHHH----HT------------T-
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC------CCCCC--CCCCC----cchh----hc------------C-
Confidence 36999999999999999999985 899999994 11111 12221 2210 00 0
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEe-CCCceEEEEcCeEEEcCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQ-LDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~-~~g~~~~~~~d~liiAtG~~ 176 (498)
...++..+..+. .+.+.++.+++++.+. +..++ .+.+.+.. .+|+...+.||+||+|||++
T Consensus 87 -----~~~~~~~l~~~~----------~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 87 -----AIASTEKLIARN----------VKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp -----SSSCGGGGBSSC----------HHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -----CcCCHHHhhhcC----------HHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCc
Confidence 000111111000 1112234589998864 56676 45666654 34544479999999999999
Q ss_pred CCCCCCCCCCc--c---cChHHHhcccc-----CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHH
Q 042564 177 AQRAPIPGQEL--A---ITSDEALSLEE-----LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRA 246 (498)
Q Consensus 177 p~~p~i~g~~~--~---~~~~~~~~l~~-----~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~ 246 (498)
|+.|++||.+. + .+.++...+.+ .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++.+++++.+
T Consensus 152 p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~ 231 (480)
T 3cgb_A 152 PVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAE 231 (480)
T ss_dssp ECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHH
T ss_pred ccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHH
Confidence 99999998742 3 34566655543 68999999999999999999999999999999999988889999999
Q ss_pred HHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCC
Q 042564 247 VVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRT 326 (498)
Q Consensus 247 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t 326 (498)
.+.+.+++.||++++++.|.++..+++...+.++ +.++++|.||+|+|++|+.++ ++..|++++++|+|.||+++||
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D~vi~a~G~~p~~~~--l~~~g~~~~~~G~I~Vd~~~~t 308 (480)
T 3cgb_A 232 YIYKEADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKADLVLVSVGVKPNTDF--LEGTNIRTNHKGAIEVNAYMQT 308 (480)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECSEEEECSCEEESCGG--GTTSCCCBCTTSCBCCCTTSBC
T ss_pred HHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcCEEEECcCCCcChHH--HHhCCcccCCCCCEEECCCccC
Confidence 9999999999999999999999865332345554 457999999999999999986 6778899998899999999999
Q ss_pred CCCCeEEecccCCC----------CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCC
Q 042564 327 NVPSIWAVGDVTNR----------MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGK 396 (498)
Q Consensus 327 ~~~~iya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~ 396 (498)
++|+|||+|||+.. +++++.|.+||+++|+||++.......+..+|+..|++|+++++|++|++|+..|+
T Consensus 309 s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~ 388 (480)
T 3cgb_A 309 NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHI 388 (480)
T ss_dssp SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC
T ss_pred CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCCCccceeEEEECCcEEEEeCCCHHHHHHcCC
Confidence 99999999999942 36789999999999999998654444566789999999999999999999998765
Q ss_pred CCEEEEEEecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCC-hhHHHHHHHHHHHCCCCHHHHhcC-cCCCCChh
Q 042564 397 GDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPE-APEIMQGIAVALKCGATKAQFDST-VGIHPSSA 474 (498)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~-a~~~i~~~~~~i~~~~~~~~l~~~-~~~~pt~~ 474 (498)
++.+............ ...+.+|+|+++++++++|+|++++|+. +.|+|+.++++|++++|++||.++ +++|||++
T Consensus 389 -~~~~~~~~~~~~~~~~-~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~ 466 (480)
T 3cgb_A 389 -PYKTVKVDSTNMAGYY-PNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYN 466 (480)
T ss_dssp -CEEEEEEEEESSCTTS-TTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTC
T ss_pred -ceEEEEEecCCccccc-CCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCCCCC
Confidence 4554433332212112 2356789999999889999999999998 999999999999999999999997 67999999
Q ss_pred HHHHHHHHHHHH
Q 042564 475 EEFVTMRSVTRR 486 (498)
Q Consensus 475 e~~~~~~~~~~~ 486 (498)
|.+..+..++.+
T Consensus 467 e~~~~~~~a~~~ 478 (480)
T 3cgb_A 467 SVWDPIQQAARR 478 (480)
T ss_dssp CSSCHHHHHHHH
T ss_pred CchhHHHHHHHh
Confidence 988776655544
No 39
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=8.3e-57 Score=460.81 Aligned_cols=412 Identities=22% Similarity=0.300 Sum_probs=317.2
Q ss_pred ccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
+||+|||||+||+++|..|++. |.+|+|||+ .+ ..| +.+| ........ .+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~------~~---~~~----~~~~---~~~~~~~~---------~~--- 52 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEK------GD---FIS----FLSA---GMQLYLEG---------KV--- 52 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEES------SS---SSS----BCGG---GHHHHHTT---------SS---
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEEC------CC---ccC----cccc---cchhhhcC---------cc---
Confidence 3899999999999999999996 999999994 11 111 2222 11111000 00
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEe-CCCceEEEEcCeEEEcCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQ-LDGTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~-~~g~~~~~~~d~liiAtG~~p 177 (498)
.++..+ .......+.+.+++++.+. +..++ .+.+.+.. .+|+..+++||+||+|||++|
T Consensus 53 ------~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 53 ------KDVNSV-----------RYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp ------CCGGGS-----------BSCCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ------CCHHHh-----------hcCCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 001000 0011123445689997776 44564 45566654 345444689999999999999
Q ss_pred CCCCCCCCC--cccCh---HHHhccc---c--CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC-CCCHHHHH
Q 042564 178 QRAPIPGQE--LAITS---DEALSLE---E--LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR-GFDDEMRA 246 (498)
Q Consensus 178 ~~p~i~g~~--~~~~~---~~~~~l~---~--~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~-~~~~~~~~ 246 (498)
..|++||.+ .++++ ++...+. . .+++++|||+|++|+|+|..+++.|.+|+++++.+.+++ .+++++.+
T Consensus 116 ~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~ 195 (447)
T 1nhp_A 116 FELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTD 195 (447)
T ss_dssp CCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHH
T ss_pred CCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHH
Confidence 999999875 24443 3333332 2 689999999999999999999999999999999998888 48999999
Q ss_pred HHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCC
Q 042564 247 VVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRT 326 (498)
Q Consensus 247 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t 326 (498)
.+.+.+++.||++++++.|.++..++....+.+ +++++++|.||+|+|++|+.++ ++.. ++++++|+|.||+++||
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~--~~~~-~~~~~~G~i~Vd~~~~t 271 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTAW--LKGT-LELHPNGLIKTDEYMRT 271 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCCTTCBC
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChHH--HHhh-hhhcCCCcEEECccccC
Confidence 999999999999999999999976532224555 5568999999999999999986 4556 77888899999999999
Q ss_pred CCCCeEEecccCCC----------CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEeccCCeeEeeCCHHHHHHcCC
Q 042564 327 NVPSIWAVGDVTNR----------MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGK 396 (498)
Q Consensus 327 ~~~~iya~GD~~~~----------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~~~ 396 (498)
+.|+|||+|||+.. +++++.|.+||+++|+||++.......+...|+..|++|+++++|+++++|+..|+
T Consensus 272 ~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~ 351 (447)
T 1nhp_A 272 SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGK 351 (447)
T ss_dssp SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTC
T ss_pred CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCCccccEEEEECCeeeEEecCCHHHHHHcCC
Confidence 99999999999962 46899999999999999998543344456788999999999999999999998765
Q ss_pred CCEEEEEEecCCCcccccc-CCceeEEEEEEECCCCeEEEEEEECCC-hhHHHHHHHHHHHCCCCHHHHhcC-cCCCCCh
Q 042564 397 GDILVFTSSFNPMRNTISG-RQEKTVMKLVVDAETEKVLGASMCGPE-APEIMQGIAVALKCGATKAQFDST-VGIHPSS 473 (498)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~i~G~~~~g~~-a~~~i~~~~~~i~~~~~~~~l~~~-~~~~pt~ 473 (498)
++.+.. +....++... ..+.+|+|+++++++++|+|+|++|+. +.|+|+.++++|++++|++||.++ +++|||+
T Consensus 352 -~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~ 428 (447)
T 1nhp_A 352 -ETKAVT--VVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAF 428 (447)
T ss_dssp -CCEEEE--EEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTT
T ss_pred -ceEEEE--EEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCC
Confidence 343332 2222333222 456789999999889999999999998 999999999999999999999997 7999999
Q ss_pred hHHHHHHHHHHHHH
Q 042564 474 AEEFVTMRSVTRRV 487 (498)
Q Consensus 474 ~e~~~~~~~~~~~~ 487 (498)
+|.+..+..++..+
T Consensus 429 ~e~~~~~~~aa~~~ 442 (447)
T 1nhp_A 429 DKPWNIINTAALEA 442 (447)
T ss_dssp CCSSCHHHHHHHHH
T ss_pred CCcccHHHHHHHHH
Confidence 99887766555543
No 40
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=9.5e-57 Score=475.87 Aligned_cols=404 Identities=21% Similarity=0.276 Sum_probs=312.5
Q ss_pred CCccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCc-hhhHHHHHHhHhhHHHhhhhcC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGC-VPKKILVYGASFGGELEDARSY 98 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~-~p~~~l~~~~~~~~~~~~~~~~ 98 (498)
.++||+|||||+||++||.+|++. |.+|+|||+ .+.. | +..| +|. ...
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~------~~~~---~----~~~~~lp~----~~~------------ 85 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVER------GEYI---S----FANCGLPY----YIG------------ 85 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECS------SSCS---S----BCGGGHHH----HHT------------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEEC------CCCc---c----ccCCCCch----hhc------------
Confidence 357999999999999999999997 899999994 2211 1 1111 121 000
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC--CEEEEEe-CCCceEEEEcCeEEEcCC
Q 042564 99 GWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP--NEVEVTQ-LDGTKLSYSAKHILIATG 174 (498)
Q Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~--~~~~v~~-~~g~~~~~~~d~liiAtG 174 (498)
+.... .. ..+...+..+.++.++++..++ +..++. +.+.+.. .+|+...+.||+||+|||
T Consensus 86 g~~~~------~~----------~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG 149 (588)
T 3ics_A 86 GVITE------RQ----------KLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPG 149 (588)
T ss_dssp TSSCC------GG----------GGBSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcCCC------hH----------HhhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCC
Confidence 00000 00 0011122333455789887654 556654 4555543 345555789999999999
Q ss_pred CCCCCCCCCCC-C--cccChH---HHhcc-----ccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHH
Q 042564 175 SRAQRAPIPGQ-E--LAITSD---EALSL-----EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDE 243 (498)
Q Consensus 175 ~~p~~p~i~g~-~--~~~~~~---~~~~l-----~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~ 243 (498)
++|+.|++||. + .+++.. +...+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++.++++
T Consensus 150 ~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~ 229 (588)
T 3ics_A 150 AKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYE 229 (588)
T ss_dssp EEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHH
T ss_pred CCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHH
Confidence 99999999987 3 233322 22222 2468999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCC
Q 042564 244 MRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDEN 323 (498)
Q Consensus 244 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~ 323 (498)
+.+.+.+.+++.||++++++.|.++..+++ .+.+.+|+++++|.||+|+|++|++++ ++..|++++++|+|.||++
T Consensus 230 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~g~~~~~~g~i~vd~~ 305 (588)
T 3ics_A 230 MAAYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGVQPESSL--AKGAGLALGVRGTIKVNEK 305 (588)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCEEECCHH--HHHTTCCBCGGGCBCCCTT
T ss_pred HHHHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCCCCChHH--HHhcCceEcCCCCEEECCc
Confidence 999999999999999999999999976544 477788989999999999999999986 6788999999999999999
Q ss_pred CCCCCCCeEEecccCC-------C---CCChHHHHHHHHHHHHHHhC-CCCCCCCCCCCcEEEeccCCeeEeeCCHHHHH
Q 042564 324 SRTNVPSIWAVGDVTN-------R---MNLTPVALMEGTCFAKTVFG-GQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAI 392 (498)
Q Consensus 324 ~~t~~~~iya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~ 392 (498)
++|++|+|||+|||+. . +++++.|.+||+++|+||+| ...........+...|++|++++||+||+||+
T Consensus 306 ~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a~ 385 (588)
T 3ics_A 306 FQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILK 385 (588)
T ss_dssp SBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCHHHHH
T ss_pred cccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeEEEEecCCHHHHH
Confidence 9999999999999984 2 56889999999999999998 43332222223345588999999999999999
Q ss_pred HcCCCCEEEEEEecCCCccc-cccCCceeEEEEEEECCCCeEEEEEEECC-ChhHHHHHHHHHHHCCCCHHHHhcCcCCC
Q 042564 393 EQGKGDILVFTSSFNPMRNT-ISGRQEKTVMKLVVDAETEKVLGASMCGP-EAPEIMQGIAVALKCGATKAQFDSTVGIH 470 (498)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~kl~~~~~~~~i~G~~~~g~-~a~~~i~~~~~~i~~~~~~~~l~~~~~~~ 470 (498)
++|+ ++.+..... ..++ +....+.+|+|+++|+++++|||+|++|+ .+.|+|+.+++||++++|++||.+++++|
T Consensus 386 ~~g~-~~~~~~~~~--~~~~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~~~~ 462 (588)
T 3ics_A 386 RLNI-PYEVVHVQA--NSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLELSY 462 (588)
T ss_dssp HTTC-CCEEEEEEE--ESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCCCCC
T ss_pred HcCC-CeEEEEEec--CCccccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhhhcc
Confidence 9865 454444322 2222 33456789999999999999999999998 58999999999999999999999999988
Q ss_pred -CChhHHH
Q 042564 471 -PSSAEEF 477 (498)
Q Consensus 471 -pt~~e~~ 477 (498)
|++++.+
T Consensus 463 ~P~~~~~~ 470 (588)
T 3ics_A 463 APPYSSAK 470 (588)
T ss_dssp STTTCCSS
T ss_pred CCCccccc
Confidence 9987643
No 41
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.8e-56 Score=472.26 Aligned_cols=405 Identities=20% Similarity=0.296 Sum_probs=312.6
Q ss_pred ccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCc-hhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 24 FDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGC-VPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~-~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
+||+|||||+||++||..|++. |.+|+|||+ .+.. + +..| +|. ... .. .
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~------~~~~---~----~~~~~l~~----~~~----------~~-~ 53 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFER------GEYV---S----FANCGLPY----HIS----------GE-I 53 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECS------SSCS---S----BCGGGHHH----HHT----------SS-S
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEEC------CCCc---c----ccccCchH----Hhc----------CC-c
Confidence 5899999999999999999996 899999994 2211 1 1111 221 000 00 0
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCC--EEEEEe-CCCceEEEEcCeEEEcCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPN--EVEVTQ-LDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~--~~~v~~-~~g~~~~~~~d~liiAtG~~ 176 (498)
........ .....+.++.++++..++ +..++.. .+.+.. .+|...++.||+||||||++
T Consensus 54 ~~~~~~~~-----------------~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 54 AQRSALVL-----------------QTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp CCGGGGBC-----------------CCHHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CChHHhhc-----------------cCHHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCC
Confidence 00000000 111122234578886554 6667654 455543 23555689999999999999
Q ss_pred CCCCCCCCCCc--ccCh---HHHhcc-----ccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHH
Q 042564 177 AQRAPIPGQEL--AITS---DEALSL-----EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRA 246 (498)
Q Consensus 177 p~~p~i~g~~~--~~~~---~~~~~l-----~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~ 246 (498)
|+.|++||.+. +++. .+...+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++.+++++.+
T Consensus 117 p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~ 196 (565)
T 3ntd_A 117 PIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAG 196 (565)
T ss_dssp ECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHH
T ss_pred CCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHH
Confidence 99999999742 3332 222222 2457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEcCccEEEEEEe-------------------CCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCccc
Q 042564 247 VVARNLEGRGINLHPRTTIKELIKS-------------------EEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKA 307 (498)
Q Consensus 247 ~l~~~l~~~Gv~i~~~~~v~~i~~~-------------------~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~ 307 (498)
.+.+.+++.||++++++.|.++..+ ++.+.+++.+|+++++|.||+|+|++|++++ ++.
T Consensus 197 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~ 274 (565)
T 3ntd_A 197 FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQL--ARD 274 (565)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHH--HHH
T ss_pred HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHH--HHh
Confidence 9999999999999999999999873 4567788889999999999999999999986 577
Q ss_pred CCceeCCCCCeEcCCCCCCCCCCeEEecccCC-------C---CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEec
Q 042564 308 VGVEVDQTGAVKVDENSRTNVPSIWAVGDVTN-------R---MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFC 377 (498)
Q Consensus 308 ~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~~-------~---~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~ 377 (498)
.|++++++|+|.||+++||++|+|||+|||+. . +++++.|.+||+++|+||+|...........++..|+
T Consensus 275 ~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~ 354 (565)
T 3ntd_A 275 AGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVF 354 (565)
T ss_dssp HTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEET
T ss_pred CCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEc
Confidence 89999999999999999999999999999983 2 4678999999999999999876543333344566788
Q ss_pred cCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCcccccc-CCceeEEEEEEECCCCeEEEEEEECCCh-hHHHHHHHHHHH
Q 042564 378 IPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISG-RQEKTVMKLVVDAETEKVLGASMCGPEA-PEIMQGIAVALK 455 (498)
Q Consensus 378 ~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kl~~~~~~~~i~G~~~~g~~a-~~~i~~~~~~i~ 455 (498)
+|+++++|++|+||+++|+ ++.+.... ...++... ..+.+|+|+++|+++++|||+|++|+++ .|+|+.+++||+
T Consensus 355 ~~~~~~vG~~e~~a~~~g~-~~~~~~~~--~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~ 431 (565)
T 3ntd_A 355 DLAVGATGKNEKQLKQAGI-AFEKVYVH--TASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQR 431 (565)
T ss_dssp TEEEEEEECCHHHHHHTTC-CCEEEEEE--EESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHH
T ss_pred CcEEEEecCCHHHHHHcCC-CeEEEEEe--cCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHH
Confidence 9999999999999999865 34433322 22333222 5678999999999999999999999998 999999999999
Q ss_pred CCCCHHHHhcCcCC-CCChhHHHH
Q 042564 456 CGATKAQFDSTVGI-HPSSAEEFV 478 (498)
Q Consensus 456 ~~~~~~~l~~~~~~-~pt~~e~~~ 478 (498)
+++|++||.++.+. ||++++.+.
T Consensus 432 ~~~~~~~l~~~~~~~~P~~~~~~~ 455 (565)
T 3ntd_A 432 AGMTVEQLQHLELSYAPPYGSAKD 455 (565)
T ss_dssp TTCBHHHHTTCCCCCCTTTCCSSC
T ss_pred cCCCHHHHhhhhhccCcccCchhh
Confidence 99999999999865 598886543
No 42
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.2e-47 Score=385.33 Aligned_cols=359 Identities=22% Similarity=0.294 Sum_probs=274.9
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCC--CcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcC
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFG--AKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSY 98 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 98 (498)
+.++||+|||||+||+++|..|++.| .+|+|+|+ . .||+|++.++... +
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~----------~--------~g~~~~~~~l~~~-----------~ 52 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITA----------D--------DGRSYSKPMLSTG-----------F 52 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECS----------S--------CCCEECGGGGGGT-----------T
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEEC----------C--------CCCccCcccccHH-----------H
Confidence 34589999999999999999999988 56999993 1 1344543321110 0
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCC
Q 042564 99 GWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p 177 (498)
.. ......+. ......++++.+++++.+. +..++.....|...+ . .+.||+||+|||++|
T Consensus 53 ----~~--~~~~~~~~----------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~--~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 53 ----SK--NKDADGLA----------MAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGE-E--EVRYRDLVLAWGAEP 113 (384)
T ss_dssp ----TT--TCCHHHHE----------EECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETT-E--EEECSEEEECCCEEE
T ss_pred ----hC--CCCHHHhh----------ccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECC-c--EEECCEEEEeCCCCc
Confidence 00 00111110 0112334456789988765 667776444444433 2 799999999999999
Q ss_pred CCCCCCCCC--cccChHHHhcc------ccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-CCHHHHHHH
Q 042564 178 QRAPIPGQE--LAITSDEALSL------EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-FDDEMRAVV 248 (498)
Q Consensus 178 ~~p~i~g~~--~~~~~~~~~~l------~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l 248 (498)
..|++||.+ .+++.+++..+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+
T Consensus 114 ~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l 193 (384)
T 2v3a_A 114 IRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAV 193 (384)
T ss_dssp CCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHH
T ss_pred CCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHH
Confidence 999999864 34444433322 123899999999999999999999999999999999988887 589999999
Q ss_pred HHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCC
Q 042564 249 ARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNV 328 (498)
Q Consensus 249 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~ 328 (498)
.+.+++.||++++++.|.++..+++.+.+++.+|+++++|.||+|+|++|+.++ ++.+|++++ +| |.||+++||+.
T Consensus 194 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l--~~~~g~~~~-~g-i~vd~~~~t~~ 269 (384)
T 2v3a_A 194 QAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTEL--AFAAGLAVN-RG-IVVDRSLRTSH 269 (384)
T ss_dssp HHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHH--HHHTTCCBS-SS-EEECTTCBCSS
T ss_pred HHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHH--HHHCCCCCC-CC-EEECCCCCCCC
Confidence 999999999999999999998877778888999999999999999999999985 678899887 57 99999999999
Q ss_pred CCeEEecccCC--C--CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEecc-CCeeEeeCCHHHHHHcCCCCEEEEE
Q 042564 329 PSIWAVGDVTN--R--MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCI-PPLSVVGLSEEQAIEQGKGDILVFT 403 (498)
Q Consensus 329 ~~iya~GD~~~--~--~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~~~~-~~~~~vG~~e~~a~~~~~~~~~~~~ 403 (498)
|+|||+|||+. . .++++.|.+||+++|+||+|.. ...++..+|+++|+. +++..+|+++.+ .....+
T Consensus 270 ~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~-~~~~~~~~p~~~~~~~~~~~~~g~~~~~-----~~~~~~-- 341 (384)
T 2v3a_A 270 ANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNP-SQVAYGPMPVTVKTPACPLVVSPPPRGM-----DGQWLV-- 341 (384)
T ss_dssp TTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCC-CCCCCCCCCEEECCTTSCEEEECCCTTC-----CCEEEE--
T ss_pred CCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCC-ccCCCCCcceEEEECCeeEEEecCCCCC-----CceEEE--
Confidence 99999999985 2 3467789999999999999854 456778899999986 589999987531 111111
Q ss_pred EecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHH
Q 042564 404 SSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIA 451 (498)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~ 451 (498)
..++.+|.|++++ ++++|+|++++|+.|.|+++.+.
T Consensus 342 -----------~~~~~g~~~~~~~-~~~~i~G~~~~g~~a~e~~~~~~ 377 (384)
T 2v3a_A 342 -----------EGSGTDLKVLCRD-TAGRVIGYALTGAAVNEKLALNK 377 (384)
T ss_dssp -----------EEETTEEEEEEEC-TTSCEEEEEEEGGGGGGHHHHHT
T ss_pred -----------EecCCcEEEEEEc-cCCEEEEEEEECcchHHHHHHHH
Confidence 1234579888887 67999999999999999887653
No 43
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=8.5e-48 Score=384.81 Aligned_cols=362 Identities=20% Similarity=0.297 Sum_probs=281.3
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
++.+|+|||||+||++||..|+..+.+|+|||+ .+ .++. ++..+|+ .+ .. .
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~------~~---~~~y---~~~~l~~-~l-~g--------------~- 58 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINS------EK---YLPY---YRPRLNE-II-AK--------------N- 58 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECS------SS---SCCB---CGGGHHH-HH-HS--------------C-
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEEC------CC---CCCc---ccChhhH-HH-cC--------------C-
Confidence 456899999999999999999888999999994 21 1110 0111111 10 00 0
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
.+. +++.......+++.+++++.++ +..+|.....|.+.+|+ ++.||+||||||++|+.|
T Consensus 59 ------~~~-----------~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~--~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 59 ------KSI-----------DDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGE--KIKYEKLIIASGSIANKI 119 (385)
T ss_dssp ------CCG-----------GGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSC--EEECSEEEECCCEEECCC
T ss_pred ------CCH-----------HHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCC--EEECCEEEEecCCCcCCC
Confidence 000 0011111233456799999885 88888877778887876 899999999999999999
Q ss_pred CCCCCCcc---cChHHHhccccC---CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-CCHHHHHHHHHHHH
Q 042564 181 PIPGQELA---ITSDEALSLEEL---PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-FDDEMRAVVARNLE 253 (498)
Q Consensus 181 ~i~g~~~~---~~~~~~~~l~~~---~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l~ 253 (498)
++||.+.+ .+.++...+... +++++|||+|++|+|+|..|++.|.+|+++++.+.+++. +++++.+.+.+.++
T Consensus 120 ~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~ 199 (385)
T 3klj_A 120 KVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLD 199 (385)
T ss_dssp CCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHH
Confidence 99998643 345666555432 689999999999999999999999999999999999887 89999999999999
Q ss_pred hCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEE
Q 042564 254 GRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWA 333 (498)
Q Consensus 254 ~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya 333 (498)
+.||++++++.+.++ |+++++|.||+|+|++|++++ ++++|+..+ +| |.||++++|+.|+|||
T Consensus 200 ~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g-i~vd~~~~t~~~~IyA 262 (385)
T 3klj_A 200 RLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKPNLDF--IKDTEIASK-RG-ILVNDHMETSIKDIYA 262 (385)
T ss_dssp TTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEECCGG--GTTSCCCBS-SS-EEECTTCBCSSTTEEE
T ss_pred hCCCEEEeCCEEEEc-------------CeEEecCeEEECcCcccChhh--hhhcCCCcC-CC-EEECCCcccCCCCEEE
Confidence 999999999888766 557899999999999999987 677888876 34 9999999999999999
Q ss_pred ecccCC----CCCChHHHHHHHHHHHHHHhCCCCCCCCCCC-CcEE--EeccCCeeEeeCCHHHHHHcCCCCEEEEEEec
Q 042564 334 VGDVTN----RMNLTPVALMEGTCFAKTVFGGQPCKPDYRD-VPCA--VFCIPPLSVVGLSEEQAIEQGKGDILVFTSSF 406 (498)
Q Consensus 334 ~GD~~~----~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~-~~~~--~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~ 406 (498)
+|||+. .+.++..|..||+++|+||+|.... |.. .|+. .+++++++++|+++.+. ... +..
T Consensus 263 ~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~G~~~~~~-----~~~-~~~--- 330 (385)
T 3klj_A 263 CGDVAEFYGKNPGLINIANKQGEVAGLNACGEDAS---YSEIIPSPILKVSGISIISCGDIENNK-----PSK-VFR--- 330 (385)
T ss_dssp CGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCCCC---CCCCCCCCEEEETTEEEEEESCCTTCC-----CSE-EEE---
T ss_pred EEeeEecCCCcccHHHHHHHHHHHHHHHhcCCCcC---CCCCCCcEEEEeCCCcEEEEcCCCCCC-----CeE-EEE---
Confidence 999997 3678999999999999999986543 332 3443 44689999999997541 122 111
Q ss_pred CCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCCChhHHHHH
Q 042564 407 NPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHPSSAEEFVT 479 (498)
Q Consensus 407 ~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~ 479 (498)
......|.|++++ +++|+|++++|+.+.+. .+..+|+++.++++| ||++|.|.+
T Consensus 331 --------~~~~~~~~~~~~~--~~~l~g~~~~g~~~~~~--~~~~~i~~~~~~~~~-------~~~~E~~~~ 384 (385)
T 3klj_A 331 --------STQEDKYIVCMLK--ENKIDAAAVIGDVSLGT--KLKKAIDSSKSFDNI-------SSLDAILNN 384 (385)
T ss_dssp --------EECSSCEEEEEEE--TTEEEEEEEESCHHHHH--HHHHHHHTTCBCSCC-------SCHHHHHTT
T ss_pred --------ECCCCeEEEEEEE--CCEEEEEEEECCcHHHH--HHHHHHHcCCCcccc-------cCHHHHHhh
Confidence 1234569999994 68999999999976544 688999999999998 999998763
No 44
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.2e-47 Score=380.08 Aligned_cols=333 Identities=21% Similarity=0.352 Sum_probs=254.0
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.|++|||||+||++||..|++.| +|+|||+. ..++ +..+...+. + . +
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~----------~~~~---~~~~~l~~~----------~---~--g---- 55 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKE----------PVPY---YSKPMLSHY----------I---A--G---- 55 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSS----------SSCC---CCSTTHHHH----------H---T--T----
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECC----------CCCc---cccchhHHH----------H---h--C----
Confidence 48999999999999999999999 99999941 1110 011111100 0 0 0
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI 182 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~i 182 (498)
..++..+..+ ....+++.+++++.++ +..++++.+.|. .+|+ +++||+||||||++|+.|++
T Consensus 56 ---~~~~~~~~~~-----------~~~~~~~~~v~~~~g~~v~~id~~~~~V~-~~g~--~~~~d~lViATGs~p~~p~i 118 (367)
T 1xhc_A 56 ---FIPRNRLFPY-----------SLDWYRKRGIEIRLAEEAKLIDRGRKVVI-TEKG--EVPYDTLVLATGARAREPQI 118 (367)
T ss_dssp ---SSCGGGGCSS-----------CHHHHHHHTEEEECSCCEEEEETTTTEEE-ESSC--EEECSEEEECCCEEECCCCS
T ss_pred ---CCCHHHhccC-----------CHHHHHhCCcEEEECCEEEEEECCCCEEE-ECCc--EEECCEEEECCCCCCCCCCC
Confidence 0111111110 1123345689999985 788888776776 4554 79999999999999999999
Q ss_pred CCCCccc---ChHHHhcccc---CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCC
Q 042564 183 PGQELAI---TSDEALSLEE---LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRG 256 (498)
Q Consensus 183 ~g~~~~~---~~~~~~~l~~---~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~G 256 (498)
||.+.++ +.+++..+.+ .+++++|||+|++|+|+|..|+++|.+|+++++.+.+++ +++++.+.+.+.+++.|
T Consensus 119 ~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~g 197 (367)
T 1xhc_A 119 KGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETG 197 (367)
T ss_dssp BTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTT
T ss_pred CCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCC
Confidence 9965444 4455554433 248999999999999999999999999999999999888 99999999999999999
Q ss_pred CEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecc
Q 042564 257 INLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGD 336 (498)
Q Consensus 257 v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD 336 (498)
|++++++.|.++. .+ .+++++|+ +++|.|++|+|++||+++ +++.|++++ +| |.||+++||+.|||||+||
T Consensus 198 V~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~p~~~l--l~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD 268 (367)
T 1xhc_A 198 VKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIVPNVDL--ARRSGIHTG-RG-ILIDDNFRTSAKDVYAIGD 268 (367)
T ss_dssp EEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEEECCHH--HHHTTCCBS-SS-EECCTTSBCSSTTEEECGG
T ss_pred CEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCCcCHHH--HHhCCCCCC-CC-EEECCCcccCCCCEEEeEe
Confidence 9999999999996 22 36778888 999999999999999985 678888876 44 9999999999999999999
Q ss_pred cCCC----CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcE--EEeccCCeeEeeCCHHHHHHcCCCCEEEEEEecCCCc
Q 042564 337 VTNR----MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPC--AVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMR 410 (498)
Q Consensus 337 ~~~~----~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~--~~~~~~~~~~vG~~e~~a~~~~~~~~~~~~~~~~~~~ 410 (498)
|+.. +++++.|.+||+++|+||++... ...+ .+|+ ..|++|+++++|++|+++. .+
T Consensus 269 ~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~-~~~~-~~~~~~~~~~~~~~~~vG~~~~~~~-------~~--------- 330 (367)
T 1xhc_A 269 CAEYSGIIAGTAKAAMEQARVLADILKGEPR-RYNF-KFRSTVFKFGKLQIAIIGNTKGEGK-------WI--------- 330 (367)
T ss_dssp GEEBTTBCCCSHHHHHHHHHHHHHHHTTCCC-CCCS-SCCEEEEEETTEEEEEEECCSSCEE-------EE---------
T ss_pred eeecCCCCccHHHHHHHHHHHHHHHhcCCCc-cCCC-CCCceEEEECCceEEEECCCCCCCc-------cc---------
Confidence 9742 46899999999999999997542 2222 3343 4799999999999987421 00
Q ss_pred cccccCCceeEEEEEEECCCCeEEEEEEECCChh
Q 042564 411 NTISGRQEKTVMKLVVDAETEKVLGASMCGPEAP 444 (498)
Q Consensus 411 ~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~ 444 (498)
.+|+|++++ +++|+|++++|+.+.
T Consensus 331 --------~~~~k~~~~--~~~ilG~~~~g~~~~ 354 (367)
T 1xhc_A 331 --------EDNTKVFYE--NGKIIGAVVFNDIRK 354 (367)
T ss_dssp --------ETTEEEEC-------CEEEEESCHHH
T ss_pred --------ceEEEEEEE--CCEEEEEEEECChHH
Confidence 468999996 589999999998653
No 45
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.6e-45 Score=374.80 Aligned_cols=379 Identities=20% Similarity=0.221 Sum_probs=287.2
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCC--cEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGA--KVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~--~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
+.+||+|||||+||+++|..|++.|. +|+|||+.... + +..+..++.++. +
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~---------~----~~~~~l~~~~~~--------------~ 55 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVI---------P----HHLPPLSKAYLA--------------G 55 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSC---------C----BCSGGGGTTTTT--------------T
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCC---------C----CcCCCCcHHHhC--------------C
Confidence 45899999999999999999999998 79999942110 0 000100000000 0
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~ 178 (498)
. ..+.. +.......+.+.+++++.++ +..++.....|.+.+|+ .+.||+||+|||++|+
T Consensus 56 ~-------~~~~~-----------~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~--~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 56 K-------ATAES-----------LYLRTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGR--ALDYDRLVLATGGRPR 115 (431)
T ss_dssp C-------SCSGG-----------GBSSCHHHHHHTTEEEECSCCEEEEETTTTEEEETTSC--EEECSEEEECCCEEEC
T ss_pred C-------CChHH-----------hcccCHHHHHhCCCEEEeCCEEEEEECCCCEEEECCCC--EEECCEEEEcCCCCcc
Confidence 0 00000 00001123455789999886 67788755566666665 7999999999999999
Q ss_pred CCCCCCCCc--------ccChHHHhccc---cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-CCHHHHH
Q 042564 179 RAPIPGQEL--------AITSDEALSLE---ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-FDDEMRA 246 (498)
Q Consensus 179 ~p~i~g~~~--------~~~~~~~~~l~---~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~ 246 (498)
.|++||.+. +.+.+++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+
T Consensus 116 ~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~ 195 (431)
T 1q1r_A 116 PLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSA 195 (431)
T ss_dssp CCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHH
T ss_pred CCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHH
Confidence 999988641 24566665543 24789999999999999999999999999999999988886 8999999
Q ss_pred HHHHHHHhCCCEEEcCccEEEEEE--eCCe-EEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCC
Q 042564 247 VVARNLEGRGINLHPRTTIKELIK--SEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDEN 323 (498)
Q Consensus 247 ~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~ 323 (498)
.+.+.+++.||++++++.|.++.. +++. ..+.+.+|+++++|.||+|+|++|+.++ ++.+|++++ +| |.||++
T Consensus 196 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd~~ 271 (431)
T 1q1r_A 196 FYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCEL--ASAAGLQVD-NG-IVINEH 271 (431)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHH--HHHTTCCBS-SS-EECCTT
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcch--hhccCCCCC-CC-EEECCC
Confidence 999999999999999999999986 4444 3688889999999999999999999986 677888886 44 999999
Q ss_pred CCCCCCCeEEecccCCCC----------CChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEE--eccCCeeEeeCCHHHH
Q 042564 324 SRTNVPSIWAVGDVTNRM----------NLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAV--FCIPPLSVVGLSEEQA 391 (498)
Q Consensus 324 ~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~--~~~~~~~~vG~~e~~a 391 (498)
++|+.|+|||+|||+..+ ..+..|..||+++|+||+|... .|..+|+.. +.++++.++|+++.
T Consensus 272 ~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~~~~~~~~~~~~~~G~~~~-- 346 (431)
T 1q1r_A 272 MQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP---RDEAAPWFWSDQYEIGLKMVGLSEG-- 346 (431)
T ss_dssp SBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC---CCCCCCEEEEEETTEEEEEEECCTT--
T ss_pred cccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC---CCCCCCeEEEEECCceEEEEeCCCC--
Confidence 999999999999999752 2578899999999999997542 456678652 23478899999863
Q ss_pred HHcCCCCEEEEEEecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCCHHHHhcCcCCCC
Q 042564 392 IEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGATKAQFDSTVGIHP 471 (498)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~p 471 (498)
..++.+.. ......|++++. ++++|+|++++|+.+.+.+....++++.+++.++|.+..+.+.
T Consensus 347 ----~~~~~~~~-----------~~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~ 409 (431)
T 1q1r_A 347 ----YDRIIVRG-----------SLAQPDFSVFYL--QGDRVLAVDTVNRPVEFNQSKQIITDRLPVEPNLLGDESVPLK 409 (431)
T ss_dssp ----CSEEEEEE-----------ETTTTEEEEEEE--ETTEEEEEEEESCHHHHHHHHHHHHTTCCCCHHHHTCTTSCHH
T ss_pred ----CCEEEEEc-----------cCCCCeEEEEEE--eCCEEEEEEEECChHHHHHHHHHHHCCCCCCHHHhhCCCCCHH
Confidence 22222211 112345766654 4799999999999988888888888889999999998877655
Q ss_pred Ch
Q 042564 472 SS 473 (498)
Q Consensus 472 t~ 473 (498)
++
T Consensus 410 ~~ 411 (431)
T 1q1r_A 410 EI 411 (431)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 46
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=3.3e-44 Score=362.58 Aligned_cols=364 Identities=21% Similarity=0.298 Sum_probs=276.6
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCC--cEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGA--KVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~--~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
.++||+|||||+||+++|..|++.|. +|+|+|+. +. + .+..|..++.++.... .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~------~~---~----~~~~~~~~~~~~~~~~-~---------- 61 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDE------AE---R----PYDRPPLSKDFMAHGD-A---------- 61 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESS------CS---C----CBCSGGGGTHHHHHCC-G----------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECC------CC---C----cccCCCCCHHHhCCCc-h----------
Confidence 45899999999999999999999887 59999941 11 1 1111221111111100 0
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~ 178 (498)
. ... +. .+.+.+++++.++ +..++.....|...+|+ .+.||+||+|||++|+
T Consensus 62 ---~-~~~--------------------~~-~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~--~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 62 ---E-KIR--------------------LD-CKRAPEVEWLLGVTAQSFDPQAHTVALSDGR--TLPYGTLVLATGAAPR 114 (408)
T ss_dssp ---G-GSB--------------------CC-CTTSCSCEEEETCCEEEEETTTTEEEETTSC--EEECSEEEECCCEEEC
T ss_pred ---h-hhh--------------------HH-HHHHCCCEEEcCCEEEEEECCCCEEEECCCC--EEECCEEEECCCCCCC
Confidence 0 000 00 2345689999997 88888766667776765 7999999999999999
Q ss_pred CCCC-CCCC-c---ccChHHHhcccc---CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-CCHHHHHHHH
Q 042564 179 RAPI-PGQE-L---AITSDEALSLEE---LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-FDDEMRAVVA 249 (498)
Q Consensus 179 ~p~i-~g~~-~---~~~~~~~~~l~~---~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~ 249 (498)
.|++ ||.+ . +.+.++...+.. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.
T Consensus 115 ~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~ 194 (408)
T 2gqw_A 115 ALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVA 194 (408)
T ss_dssp CCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHH
T ss_pred CCCccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHH
Confidence 9998 8864 2 246666655433 3789999999999999999999999999999999998885 8999999999
Q ss_pred HHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCC
Q 042564 250 RNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVP 329 (498)
Q Consensus 250 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~ 329 (498)
+.+++.||++++++.|.++. + + .+++.+|+++++|.||+|+|++|++++ +++.|++++ +| |.||+++||+.|
T Consensus 195 ~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~~gl~~~-~g-i~Vd~~~~t~~~ 266 (408)
T 2gqw_A 195 RYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGVLANDAL--ARAAGLACD-DG-IFVDAYGRTTCP 266 (408)
T ss_dssp HHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCEEECCHH--HHHHTCCBS-SS-EECCTTCBCSST
T ss_pred HHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCCCccHHH--HHhCCCCCC-CC-EEECCCCccCCC
Confidence 99999999999999999997 3 3 677889999999999999999999986 677888886 45 999999999999
Q ss_pred CeEEecccCCCC----------CChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEE--eccCCeeEeeCCHHHHHHcCCC
Q 042564 330 SIWAVGDVTNRM----------NLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAV--FCIPPLSVVGLSEEQAIEQGKG 397 (498)
Q Consensus 330 ~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~~--~~~~~~~~vG~~e~~a~~~~~~ 397 (498)
+|||+|||+..+ .++..|.+||+++|+||++... ..|..+|+.. +.+++++++|+ +. ..
T Consensus 267 ~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~--~~~~~~p~~~~~~~~~~~~~~G~-~~------~~ 337 (408)
T 2gqw_A 267 DVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA--PGYAELPWYWSDQGALRIQVAGL-AS------GD 337 (408)
T ss_dssp TEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS--CCCCCCCEEEEEETTEEEEEEEC-SC------CS
T ss_pred CEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC--CcCCCCCeEEEEECCceEEEECC-CC------CC
Confidence 999999999752 3678999999999999998543 2566678653 33589999999 21 22
Q ss_pred CEEEEEEecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCC--CHHHHhcC
Q 042564 398 DILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGA--TKAQFDST 466 (498)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~--~~~~l~~~ 466 (498)
+..+ ... ......+|++++++ +++|+|++++|+.+ .+..+..+|+++. +..+|.+.
T Consensus 338 ~~~~-~~~--------~~~~~~~~~~~~~~--~~~l~G~~~~g~~~--~~~~~~~~i~~~~~~~~~~l~~~ 395 (408)
T 2gqw_A 338 EEIV-RGE--------VSLDAPKFTLIELQ--KGRIVGATCVNNAR--DFAPLRRLLAVGAKPDRAALADP 395 (408)
T ss_dssp EEEE-ESC--------CCSSSCCEEEEEEE--TTEEEEEEEESCHH--HHHHHHHHHHTTCCCCHHHHHCT
T ss_pred EEEE-Ecc--------CCCCCCeEEEEEEe--CCEEEEEEEECChH--HHHHHHHHHHCCCCCChHHhcCC
Confidence 2211 100 01114568888774 79999999999875 3578899999988 44555553
No 47
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=9.2e-43 Score=353.32 Aligned_cols=369 Identities=22% Similarity=0.270 Sum_probs=276.5
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCc--EEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAK--VGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~--V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
.++||+|||||+||+++|..|++.|.+ |+|+|+.... +... ..+++ .+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~---------~y~~---~~l~~-----------------~~- 57 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI---------PYER---PPLSK-----------------EY- 57 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC---------CBCS---GGGGT-----------------TT-
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC---------CcCc---ccCCH-----------------HH-
Confidence 468999999999999999999999987 9999942111 1000 00000 00
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEe-EEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~ 178 (498)
+ .+. ..+.. +.......+.+.+++++.+ ++..++.....|.+.+|. .+.||+||+|||++|+
T Consensus 58 ~--~~~--~~~~~-----------~~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~--~~~~d~lvlAtG~~~~ 120 (415)
T 3lxd_A 58 L--ARE--KTFER-----------ICIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDGS--AIEYGKLIWATGGDPR 120 (415)
T ss_dssp T--TTS--SCSGG-----------GBSSCHHHHHHTTEEEEETCCEEEEETTTTEEEETTSC--EEEEEEEEECCCEECC
T ss_pred H--cCC--CCHHH-----------hccCCHHHHHHCCcEEEeCCEEEEEECCCCEEEECCCC--EEEeeEEEEccCCccC
Confidence 0 000 00000 0001123345579999998 588898887778777765 8999999999999999
Q ss_pred CCCCCCCCc-----ccChHHHhcccc---C-CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-CCHHHHHHH
Q 042564 179 RAPIPGQEL-----AITSDEALSLEE---L-PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-FDDEMRAVV 248 (498)
Q Consensus 179 ~p~i~g~~~-----~~~~~~~~~l~~---~-~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l 248 (498)
.|++||.+. ..+.++...+.. . +++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+
T Consensus 121 ~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l 200 (415)
T 3lxd_A 121 RLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFY 200 (415)
T ss_dssp CCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHH
T ss_pred CCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHH
Confidence 999998652 235555544332 3 799999999999999999999999999999999998886 899999999
Q ss_pred HHHHHhCCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCC
Q 042564 249 ARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTN 327 (498)
Q Consensus 249 ~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~ 327 (498)
.+.+++.||++++++.|.++..+++. ..|.+.+|+++++|.||+|+|++|+.++ ++.+|+.++ +| |.||++++|+
T Consensus 201 ~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~g-i~vd~~~~t~ 276 (415)
T 3lxd_A 201 QAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGA--LISAGASGG-NG-VDVDEFCRTS 276 (415)
T ss_dssp HHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHH--HHHTTCCCS-SS-EECCTTCBCS
T ss_pred HHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHH--HHhCCCCcC-CC-EEECCCCCcC
Confidence 99999999999999999999876655 4788999999999999999999999987 677888877 44 9999999999
Q ss_pred CCCeEEecccCCCCC-----------ChHHHHHHHHHHHHHHhCCCCCCCCCCCCcE--EEeccCCeeEeeCCHHHHHHc
Q 042564 328 VPSIWAVGDVTNRMN-----------LTPVALMEGTCFAKTVFGGQPCKPDYRDVPC--AVFCIPPLSVVGLSEEQAIEQ 394 (498)
Q Consensus 328 ~~~iya~GD~~~~~~-----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~--~~~~~~~~~~vG~~e~~a~~~ 394 (498)
+|+|||+|||+..+. +++.|..||+++|+||+|... .|..+|+ ..+.+..+.++|+++.
T Consensus 277 ~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~~~~~~~~~~~~~~G~~~~----- 348 (415)
T 3lxd_A 277 LTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPV---PYKATPWFWSNQYDLKLQTVGLSTG----- 348 (415)
T ss_dssp STTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCC---CCCCCCEEEEEETTEEEEEEECCTT-----
T ss_pred CCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCC---CCCCCCeeEeeeCCcEEEEEeCCCC-----
Confidence 999999999997532 468999999999999998642 4666775 3344678889998742
Q ss_pred CCCCEEEEEEecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCC--CHHHHhc
Q 042564 395 GKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGA--TKAQFDS 465 (498)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~--~~~~l~~ 465 (498)
+..+.+.. ......|.++++ ++++|+|+..+|... ....+..+|..+. +.++|.+
T Consensus 349 -~~~~~~~~-----------~~~~~~~~~~~~--~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~ 405 (415)
T 3lxd_A 349 -HDNAVLRG-----------DPATRSFSVVYL--KGGKVVALDCVNMVK--DYVQGKKLVEARAQIAPEQLAD 405 (415)
T ss_dssp -CSEEEEEE-----------EGGGTEEEEEEE--ETTEEEEEEEESCHH--HHHHHHHHHHHTCCCCHHHHTC
T ss_pred -CCEEEEEe-----------cCCCCeEEEEEE--ECCEEEEEEEECChH--HHHHHHHHHHCCCCCCHHHhcC
Confidence 22222111 123456888888 468999999999842 2344556676654 4455554
No 48
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=4.7e-43 Score=354.52 Aligned_cols=366 Identities=22% Similarity=0.293 Sum_probs=273.2
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCc--EEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAK--VGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~--V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
+||+|||||+||+++|..|++.|.+ |+|||++.. . +.. +..+++..+ .. ...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~------~---~y~---~~~l~~~~~-~g-------------~~~ 56 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPH------L---PYD---RPSLSKAVL-DG-------------SLE 56 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSS------S---SBC---SGGGGTHHH-HT-------------SSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCC------C---CcC---CccccHHHh-CC-------------CCC
Confidence 4899999999999999999999987 999994211 1 100 000111000 00 000
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEe-EEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
.. .. .. ....+.+.+++++.+ ++..++.....|.+.+|+ ++.||+||+|||++|+.|
T Consensus 57 ~~-~~-~~------------------~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~--~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 57 RP-PI-LA------------------EADWYGEARIDMLTGPEVTALDVQTRTISLDDGT--TLSADAIVIATGSRARTM 114 (410)
T ss_dssp SC-CB-SS------------------CTTHHHHTTCEEEESCCEEEEETTTTEEEETTSC--EEECSEEEECCCEEECCC
T ss_pred HH-Hh-cC------------------CHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCC--EEECCEEEEccCCcccCC
Confidence 00 00 00 012234578999999 688899887778777775 899999999999999999
Q ss_pred CCCCCCc-----ccChHHHhccc---cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-CCHHHHHHHHHH
Q 042564 181 PIPGQEL-----AITSDEALSLE---ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-FDDEMRAVVARN 251 (498)
Q Consensus 181 ~i~g~~~-----~~~~~~~~~l~---~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~ 251 (498)
++||.+. ..+.++...+. ..+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+.
T Consensus 115 ~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~ 194 (410)
T 3ef6_A 115 ALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGL 194 (410)
T ss_dssp CCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHH
T ss_pred CCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHH
Confidence 9998652 23556655443 24789999999999999999999999999999999988765 789999999999
Q ss_pred HHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCe
Q 042564 252 LEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSI 331 (498)
Q Consensus 252 l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~i 331 (498)
+++.||++++++.|.++..++....+++++|+++++|.||+|+|++|+.++ ++.+|++++ + +|.||++++|+.|+|
T Consensus 195 l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~-gi~vd~~~~t~~~~I 270 (410)
T 3ef6_A 195 LTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQL--ARQAGLACD-R-GVIVDHCGATLAKGV 270 (410)
T ss_dssp HHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHH--HHHTTCCBS-S-SEECCTTSBCSSTTE
T ss_pred HHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHH--HHhCCCccC-C-eEEEccCeeECCCCE
Confidence 999999999999999998765556788999999999999999999999987 678889887 4 499999999999999
Q ss_pred EEecccCCCC---------CChHHHHHHHHHHHHHHhCCCCCCCCCCCCcEE--EeccCCeeEeeCCHHHHHHcCCCCEE
Q 042564 332 WAVGDVTNRM---------NLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCA--VFCIPPLSVVGLSEEQAIEQGKGDIL 400 (498)
Q Consensus 332 ya~GD~~~~~---------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~--~~~~~~~~~vG~~e~~a~~~~~~~~~ 400 (498)
||+|||+..+ .+++.|..||+++|+||+|.. ..|..+|+. .+.+..+.++|+++. .+..
T Consensus 271 yA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~---~~~~~~p~~~~~~~~~~~~~~G~~~~------~~~~- 340 (410)
T 3ef6_A 271 FAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN---VSAPQLPVSWTEIAGHRMQMAGDIEG------PGDF- 340 (410)
T ss_dssp EECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC---CCCCBCCEEEEEETTEEEEEESCSSS------SSEE-
T ss_pred EEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC---CCCCCCCeeEEEECCceEEEEcCCCC------CCEE-
Confidence 9999998742 347899999999999999864 345667753 334577888998753 2111
Q ss_pred EEEEecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCC--CHHHHhc
Q 042564 401 VFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGA--TKAQFDS 465 (498)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~--~~~~l~~ 465 (498)
+... ......|.++++ ++++|+|+.++|+.. ....+..+|..+. +.++|++
T Consensus 341 ~~~~----------~~~~~~~~~~~~--~~~~l~g~~~~~~~~--~~~~~~~~i~~~~~~~~~~l~~ 393 (410)
T 3ef6_A 341 VSRG----------MPGSGAALLFRL--QERRIQAVVAVDAPR--DFALATRLVEARAAIEPARLAD 393 (410)
T ss_dssp EEES----------CTTSSSEEEEEE--ETTEEEEEEEESCHH--HHHHHHHHHHHTCBCCHHHHHC
T ss_pred EEEe----------eCCCCeEEEEEE--ECCEEEEEEEECChH--HHHHHHHHHhCCCCCCHHHhcC
Confidence 1110 122334777777 478999999999843 2344555666554 5566654
No 49
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7e-42 Score=345.53 Aligned_cols=367 Identities=21% Similarity=0.275 Sum_probs=274.3
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC--cEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA--KVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~--~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
+||+|||||+||+++|..|++.|. +|+|||+... .+... ..+++. +......
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~---------~~y~~---~~l~~~--------------~l~~~~~ 55 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKH---------LPYQR---PPLSKA--------------YLKSGGD 55 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSS---------SSBCS---GGGGTG--------------GGGSCCC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCC---------CCCCC---ccCCHH--------------HHCCCCC
Confidence 589999999999999999999998 9999994211 10000 000000 0000000
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
. ...... ....+.+.+++++..++..++.....+.+.+|. .+.||+||+|||++|+.|+
T Consensus 56 ~-~~~~~~------------------~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g~--~~~~d~lvlAtG~~p~~~~ 114 (404)
T 3fg2_P 56 P-NSLMFR------------------PEKFFQDQAIELISDRMVSIDREGRKLLLASGT--AIEYGHLVLATGARNRMLD 114 (404)
T ss_dssp T-TSSBSS------------------CHHHHHHTTEEEECCCEEEEETTTTEEEESSSC--EEECSEEEECCCEEECCCC
T ss_pred H-HHccCC------------------CHHHHHhCCCEEEEEEEEEEECCCCEEEECCCC--EEECCEEEEeeCCCccCCC
Confidence 0 000000 112344578999887788888877777777765 8999999999999999999
Q ss_pred CCCCCc--c---cChHHHhccc---cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-CCHHHHHHHHHHH
Q 042564 182 IPGQEL--A---ITSDEALSLE---ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-FDDEMRAVVARNL 252 (498)
Q Consensus 182 i~g~~~--~---~~~~~~~~l~---~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l 252 (498)
+||.+. + .+.++...+. ..+++++|||+|.+|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+.+
T Consensus 115 i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l 194 (404)
T 3fg2_P 115 VPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRH 194 (404)
T ss_dssp STTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHH
T ss_pred CCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHH
Confidence 998642 2 2445544332 24789999999999999999999999999999999998876 8999999999999
Q ss_pred HhCCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCe
Q 042564 253 EGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSI 331 (498)
Q Consensus 253 ~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~i 331 (498)
++.||++++++.|.++..+++. ..|.+++|+++++|.||+|+|++|+.++ ++.+|+.++ +| |.||++++|+.|+|
T Consensus 195 ~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~G-i~vd~~~~t~~~~i 270 (404)
T 3fg2_P 195 SGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEI--AAAAGLPTA-AG-IIVDQQLLTSDPHI 270 (404)
T ss_dssp HHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHH--HHHTTCCBS-SS-EEECTTSBCSSTTE
T ss_pred HhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHH--HHhCCCCCC-CC-EEECCCcccCCCCE
Confidence 9999999999999999887655 4688999999999999999999999987 677888887 45 99999999999999
Q ss_pred EEecccCCCC----------CChHHHHHHHHHHHHHHhCCCCCCCCCCCCcE--EEeccCCeeEeeCCHHHHHHcCCCCE
Q 042564 332 WAVGDVTNRM----------NLTPVALMEGTCFAKTVFGGQPCKPDYRDVPC--AVFCIPPLSVVGLSEEQAIEQGKGDI 399 (498)
Q Consensus 332 ya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~--~~~~~~~~~~vG~~e~~a~~~~~~~~ 399 (498)
||+|||+..+ ..++.|..||+++|+||+|.. ..|..+|+ .-+.+..+.++|++.. ++.+
T Consensus 271 ya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~---~~~~~~p~~~~~~~~~~~~~~G~~~~------~~~~ 341 (404)
T 3fg2_P 271 SAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA---KPYDGYPWFWSDQGDDKLQIVGLTAG------FDQV 341 (404)
T ss_dssp EECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC---CCCCCCCEEEEEETTEEEEEEECCTT------CCEE
T ss_pred EEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC---CCCCCCCceEeEECCcEEEEEeCCCC------CCEE
Confidence 9999998742 247899999999999999864 24666775 3344678889998742 2222
Q ss_pred EEEEEecCCCccccccCCceeEEEEEEECCCCeEEEEEEECCChhHHHHHHHHHHHCCCC--HHHHhc
Q 042564 400 LVFTSSFNPMRNTISGRQEKTVMKLVVDAETEKVLGASMCGPEAPEIMQGIAVALKCGAT--KAQFDS 465 (498)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~i~G~~~~g~~a~~~i~~~~~~i~~~~~--~~~l~~ 465 (498)
.+ .. ......|.++++. +++|+|+..+|... ....+..+|..+.. .++|++
T Consensus 342 ~~-~~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~ 394 (404)
T 3fg2_P 342 VI-RG----------SVAERSFSAFCYK--AGKLIGIESVNRAA--DHVFGRKILPLDKSVTPEQAAD 394 (404)
T ss_dssp EE-EE----------ETTTTEEEEEEEE--TTEEEEEEEESCHH--HHHHHHHHTTTTCCCCHHHHHC
T ss_pred EE-Ee----------cCCCCcEEEEEEE--CCEEEEEEEeCCHH--HHHHHHHHHHcCCCCCHHHhcC
Confidence 21 11 1234568898884 68999999999852 34456667777654 344543
No 50
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1e-40 Score=325.46 Aligned_cols=285 Identities=24% Similarity=0.298 Sum_probs=210.4
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
.+|||+||||||||++||++|++.|++|+||| +..+||+|.+++|+|+. +.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE----------~~~~gG~~~~~~~i~~~---------------p~---- 55 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIE----------RGIPGGQMANTEEVENF---------------PG---- 55 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTGGGGGCSCBCCS---------------TT----
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEe----------cCCCCCeeecccccCCc---------------CC----
Confidence 36999999999999999999999999999999 67789999999998731 00
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
.......++..+. .....+....+..+. ....+.....+...+++ +++||++|||||++|+.|
T Consensus 56 ---~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 56 ---FEMITGPDLSTKM-----------FEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNK--ELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp ---CSSBCHHHHHHHH-----------HHHHHHTTCEEEECCCCEEEECSSCEEEECSSC--EEEEEEEEECCCEEECCC
T ss_pred ---ccccchHHHHHHH-----------HHHHhhccccccceeeeeeeeeecceeeccCCe--EEEeceeEEcccCccCcC
Confidence 1112222322221 122334455555543 22233333333333444 899999999999999999
Q ss_pred CCCCCCcc-----cChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhC
Q 042564 181 PIPGQELA-----ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGR 255 (498)
Q Consensus 181 ~i~g~~~~-----~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~ 255 (498)
++||.+.. ............+++++|||+|++|+|+|..|+++|.+|+++++.+++++... ...+.++..
T Consensus 120 ~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~-----~~~~~~~~~ 194 (312)
T 4gcm_A 120 GVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRI-----LQDRAFKND 194 (312)
T ss_dssp CCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHH-----HHHHHHHCT
T ss_pred CCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchh-----HHHHHHHhc
Confidence 99997532 11122222234578999999999999999999999999999999988765321 123456677
Q ss_pred CCEEEcCccEEEEEEeCCeEE---EEE---CCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCC
Q 042564 256 GINLHPRTTIKELIKSEEGVK---VIT---DHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVP 329 (498)
Q Consensus 256 Gv~i~~~~~v~~i~~~~~~~~---v~~---~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~ 329 (498)
++.......+..+...+.... ... .++..+++|.|++++|..|+..+ ++..++. +++|+|.||+++|||+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~--~~~~g~~-~~~G~I~vd~~~~Ts~p 271 (312)
T 4gcm_A 195 KIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAP--FKDLGIT-NDVGYIVTKDDMTTSVP 271 (312)
T ss_dssp TEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG--GGGGTCB-CTTSCBCCCTTSBCSST
T ss_pred CcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchh--HHhccee-cCCCeEeeCCCCccCCC
Confidence 888888877777766554321 111 23457899999999999999987 5666775 56789999999999999
Q ss_pred CeEEecccCCC-CCChHHHHHHHHHHHHHHh
Q 042564 330 SIWAVGDVTNR-MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 330 ~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 359 (498)
||||+|||++. +.+++.|..||++||++|.
T Consensus 272 gIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 272 GIFAAGDVRDKGLRQIVTATGDGSIAAQSAA 302 (312)
T ss_dssp TEEECSTTBSCSCCSHHHHHHHHHHHHHHHH
T ss_pred CEEEEeecCCCcchHHHHHHHHHHHHHHHHH
Confidence 99999999974 6789999999999999985
No 51
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=5.3e-40 Score=320.59 Aligned_cols=292 Identities=23% Similarity=0.262 Sum_probs=215.4
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
|+..|||+||||||||++||++|++.|++|+||| +...||.|.+ ||+|++.++ .+++.+.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE----------~~~~gg~~~~-G~~~~~~~i---------~~~~g~~ 60 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYE----------GFMAGGVAAG-GQLTTTTII---------ENFPGFP 60 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEEC----------CSSGGGCCTT-CGGGGSSEE---------CCSTTCT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEe----------cCCCCCcccC-CCcCChHHh---------hhccCCc
Confidence 5567999999999999999999999999999999 6778999987 998854321 1111111
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEE--eCCEEEEEeCCCceEEEEcCeEEEcCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIV--GPNEVEVTQLDGTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i--~~~~~~v~~~~g~~~~~~~d~liiAtG~~p 177 (498)
..++..++..+ +...+.+.++++....+... +...+.+.+.++. ++.||+||||||++|
T Consensus 61 ------~~i~~~~l~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 61 ------NGIDGNELMMN-----------MRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGK--EVLTKSVIIATGATA 121 (314)
T ss_dssp ------TCEEHHHHHHH-----------HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCC--EEEEEEEEECCCEEE
T ss_pred ------ccCCHHHHHHH-----------HHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCe--EEEEeEEEEcccccc
Confidence 12233333332 23344556787777665543 3344555555654 899999999999999
Q ss_pred CCCCCCCCCcc-----cChHHHhcc--ccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHH
Q 042564 178 QRAPIPGQELA-----ITSDEALSL--EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR 250 (498)
Q Consensus 178 ~~p~i~g~~~~-----~~~~~~~~l--~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~ 250 (498)
+.|++||.+.. ......... ...+++++|||+|++|+|+|..|+++|.+|++++|.+.... .+.. ..+
T Consensus 122 ~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~--~~~~---~~~ 196 (314)
T 4a5l_A 122 KRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA--SKTM---QER 196 (314)
T ss_dssp CCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHHH---HHH
T ss_pred cccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc--cchh---hhh
Confidence 99999997531 122222222 23478999999999999999999999999999998775432 3332 334
Q ss_pred HHHhCCCEEEcCccEEEEEEeCCe---EEEEE---CCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCC
Q 042564 251 NLEGRGINLHPRTTIKELIKSEEG---VKVIT---DHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENS 324 (498)
Q Consensus 251 ~l~~~Gv~i~~~~~v~~i~~~~~~---~~v~~---~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~ 324 (498)
.....++..+....+.++...+.. +.+.. .+++++++|.|++|+|++||++++. ..+.++++|.| ||+++
T Consensus 197 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~---~~~~~~~~G~i-v~~~~ 272 (314)
T 4a5l_A 197 VLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLG---GQVKTADDGYI-LTEGP 272 (314)
T ss_dssp HHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT---TSSCBCTTSCB-CCBTT
T ss_pred hhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhc---ccceEcCCeeE-eCCCC
Confidence 455668889988888888765543 23332 3456899999999999999999853 34777888765 89999
Q ss_pred CCCCCCeEEecccCCCC-CChHHHHHHHHHHHHHHh
Q 042564 325 RTNVPSIWAVGDVTNRM-NLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 325 ~t~~~~iya~GD~~~~~-~~~~~A~~~g~~aa~~i~ 359 (498)
|||+|||||+|||++.+ .++..|..||+.||.++.
T Consensus 273 ~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 273 KTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp BCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999875 578899999999998874
No 52
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=4.1e-38 Score=308.81 Aligned_cols=288 Identities=24% Similarity=0.289 Sum_probs=217.7
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
|+.++||+||||||||+++|..|++.|++|+|+| +..+||.|.+..++.. ++.+
T Consensus 5 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~~~gg~~~~~~~~~~---------------~~~~- 58 (325)
T 2q7v_A 5 TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILE----------KGMPGGQIAWSEEVEN---------------FPGF- 58 (325)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSCTTGGGGGCSCBCC---------------STTC-
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEe----------CCCCCccccccccccc---------------CCCC-
Confidence 3446899999999999999999999999999999 3467899876554321 0011
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCC---E--EEEEeCCCceEEEEcCeEEEcCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPN---E--VEVTQLDGTKLSYSAKHILIATG 174 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~---~--~~v~~~~g~~~~~~~d~liiAtG 174 (498)
. ..+.+..+ ...+...+.+.+++++.+.+..++.. . +.|.+.+|. .++||+||+|||
T Consensus 59 -~----~~~~~~~~-----------~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~--~~~~~~vv~AtG 120 (325)
T 2q7v_A 59 -P----EPIAGMEL-----------AQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNG--EYRAKAVILATG 120 (325)
T ss_dssp -S----SCBCHHHH-----------HHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSC--EEEEEEEEECCC
T ss_pred -C----CCCCHHHH-----------HHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCC--EEEeCEEEECcC
Confidence 0 01222222 22233445667899988777766533 2 566555654 799999999999
Q ss_pred CCCCCCCCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHH
Q 042564 175 SRAQRAPIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVA 249 (498)
Q Consensus 175 ~~p~~p~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~ 249 (498)
+.|..|++||.+. +............+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++.+ .
T Consensus 121 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~----~ 194 (325)
T 2q7v_A 121 ADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR--ANKVA----Q 194 (325)
T ss_dssp EEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC--SCHHH----H
T ss_pred CCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC--cchHH----H
Confidence 9999999988753 22222222223356899999999999999999999999999999987653 34433 2
Q ss_pred HHH-HhCCCEEEcCccEEEEEEeCCeEEEEEC---CCe--EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCC
Q 042564 250 RNL-EGRGINLHPRTTIKELIKSEEGVKVITD---HGE--EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDEN 323 (498)
Q Consensus 250 ~~l-~~~Gv~i~~~~~v~~i~~~~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~ 323 (498)
+.+ ++.||++++++.+.++..++....+.+. +|+ ++++|.||+|+|++|+.++ ++.. ++++++|+|.||++
T Consensus 195 ~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~-~~~~~~g~i~vd~~ 271 (325)
T 2q7v_A 195 ARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAF--VKDT-VSLRDDGYVDVRDE 271 (325)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG--GTTT-SCBCTTSCBCCBTT
T ss_pred HHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHH--Hhhh-cccCCCccEecCCC
Confidence 334 4469999999999999875433345553 564 7899999999999999987 4455 77888899999999
Q ss_pred CCCCCCCeEEecccCCC-CCChHHHHHHHHHHHHHHhC
Q 042564 324 SRTNVPSIWAVGDVTNR-MNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 324 ~~t~~~~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 360 (498)
++|++|+|||+|||+.. ++++..|..||+++|.||..
T Consensus 272 ~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 272 IYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp TBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999986 68899999999999999863
No 53
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=5.2e-39 Score=332.02 Aligned_cols=326 Identities=19% Similarity=0.272 Sum_probs=230.2
Q ss_pred ccCCCCccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhh
Q 042564 18 EQTHFDFDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDA 95 (498)
Q Consensus 18 ~~~~~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~ 95 (498)
..|+.++||+|||||+||++||..|++. |.+|+|||+ .+ .++ +..|.+++.++..... ......
T Consensus 6 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~------~~---~~~----y~r~~lsk~l~~~~~~-~~~~~~ 71 (493)
T 1m6i_A 6 DKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSE------DP---ELP----YMRPPLSKELWFSDDP-NVTKTL 71 (493)
T ss_dssp --CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEES------SS---SCC----BCSGGGGTGGGCC--C-THHHHC
T ss_pred CCCCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeC------CC---CCC----CCCCCCCHHhhcCCcc-chhhcc
Confidence 3445568999999999999999999875 899999994 11 111 2334555544433211 000100
Q ss_pred hcCCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEe-EEEEEeCCEEEEEeCCCceEEEEcCeEEEcCC
Q 042564 96 RSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG-EGKIVGPNEVEVTQLDGTKLSYSAKHILIATG 174 (498)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG 174 (498)
...++... ...+.+.....+.. ...+. .+.+.+++++.+ .+..++.....|.+.+|+ .+.||+||||||
T Consensus 72 ~~~~~~~~-~~~~~~~~~~~~~~--~~~l~-----~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~--~i~yd~lviATG 141 (493)
T 1m6i_A 72 RFKQWNGK-ERSIYFQPPSFYVS--AQDLP-----HIENGGVAVLTGKKVVQLDVRDNMVKLNDGS--QITYEKCLIATG 141 (493)
T ss_dssp EEECTTSC-EEESBSSCGGGSBC--TTTTT-----TSTTCEEEEEETCCEEEEEGGGTEEEETTSC--EEEEEEEEECCC
T ss_pred cccccccc-cccccccchHhhcc--hhhhh-----hhhcCCeEEEcCCEEEEEECCCCEEEECCCC--EEECCEEEECCC
Confidence 00111100 00000000000000 00000 013468999998 477787665667777765 799999999999
Q ss_pred CCCCCCCCCCC------Cc---ccChHHHhcccc---CCCeEEEEcCCHHHHHHHHHHHH----CCCcEEEEeeCCCCCC
Q 042564 175 SRAQRAPIPGQ------EL---AITSDEALSLEE---LPKRAVVLGGGYIAVEFASIWRG----MGSTVDLLFRKELPLR 238 (498)
Q Consensus 175 ~~p~~p~i~g~------~~---~~~~~~~~~l~~---~~~~v~ViG~G~~g~e~a~~l~~----~g~~V~lv~~~~~~l~ 238 (498)
++|+.|++++. +. ..+.+++..+.. .+++++|||+|++|+|+|..|.+ .|.+|+++++.+.++.
T Consensus 142 s~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~ 221 (493)
T 1m6i_A 142 GTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG 221 (493)
T ss_dssp EEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT
T ss_pred CCCCCCCCcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc
Confidence 99988765442 11 235555544432 47999999999999999999876 5789999998876665
Q ss_pred C-CCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCC-CC
Q 042564 239 G-FDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQ-TG 316 (498)
Q Consensus 239 ~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~-~g 316 (498)
. +++++.+.+.+.+++.||++++++.|.++..+++.+.+++.+|+++++|.||+|+|++||+++ ++.+|+++++ +|
T Consensus 222 ~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l--~~~~gl~~~~~~g 299 (493)
T 1m6i_A 222 KILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVEL--AKTGGLEIDSDFG 299 (493)
T ss_dssp TTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTT--HHHHTCCBCTTTC
T ss_pred ccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHH--HHHcCCccccCCC
Confidence 4 788999999999999999999999999998776667888999999999999999999999987 6778888885 58
Q ss_pred CeEcCCCCCCCCCCeEEecccCCC---------CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCcE
Q 042564 317 AVKVDENSRTNVPSIWAVGDVTNR---------MNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPC 373 (498)
Q Consensus 317 ~i~vd~~~~t~~~~iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~ 373 (498)
+|.||+++|| .|+|||+|||+.. ...+..|..||++||+||++... .|...|+
T Consensus 300 gi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~~---~~~~~~~ 361 (493)
T 1m6i_A 300 GFRVNAELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAK---PYWHQSM 361 (493)
T ss_dssp SEECCTTCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCCC---CCCCCCE
T ss_pred cEEECCCccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCCC---CcCCcCc
Confidence 8999999998 6999999999863 23566899999999999997542 2444554
No 54
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=1.7e-37 Score=302.35 Aligned_cols=284 Identities=23% Similarity=0.251 Sum_probs=218.1
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC-cEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA-KVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~-~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
|||+|||||++|+++|..|++.|. +|+|+| +...||.|.+..++.. ++.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie----------~~~~gg~~~~~~~~~~---------------~~~~~--- 53 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFE----------KGMPGGQITGSSEIEN---------------YPGVK--- 53 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEEC----------SSSTTCGGGGCSCBCC---------------STTCC---
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEc----------CCCCCccccccccccc---------------CCCCc---
Confidence 799999999999999999999999 999999 4567888876654321 00110
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEe--CCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVG--PNEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~--~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
..++...+. ..+...+.+.+++++.+++..++ .+.+.+...+|+ .++||+||+|||+.|..|
T Consensus 54 ---~~~~~~~~~-----------~~l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~--~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 54 ---EVVSGLDFM-----------QPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGK--TFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp ---SCBCHHHHH-----------HHHHHHHHTTSCEEECSCEEEEEEETTEEEEEETTSC--EEEEEEEEECCCEEECCC
T ss_pred ---ccCCHHHHH-----------HHHHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCC--EEECCEEEECCCCCCCCC
Confidence 112333322 22334455678998876666554 456677666665 799999999999999999
Q ss_pred CCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHH-h
Q 042564 181 PIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLE-G 254 (498)
Q Consensus 181 ~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~-~ 254 (498)
++||.+. +.+..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++.+ .+.+. +
T Consensus 118 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~----~~~l~~~ 191 (311)
T 2q0l_A 118 GIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR--CAPIT----LEHAKNN 191 (311)
T ss_dssp CCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC--SCHHH----HHHHHTC
T ss_pred CCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC--CCHHH----HHHHhhC
Confidence 9988642 22222222233456899999999999999999999999999999987753 45543 33444 4
Q ss_pred CCCEEEcCccEEEEEEeCCeE-EEEEC---CCe--EEEcCEEEEecCCCcCCCCCCcccC----CceeCCCCCeEcCCCC
Q 042564 255 RGINLHPRTTIKELIKSEEGV-KVITD---HGE--EIVADVVLFATGRAPNTKRLNLKAV----GVEVDQTGAVKVDENS 324 (498)
Q Consensus 255 ~Gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~l~~~----gi~~~~~g~i~vd~~~ 324 (498)
.||++++++.+.++..+++++ .+.+. +|+ ++++|.||+|+|++|++++ ++.. +++++++|+|.||+++
T Consensus 192 ~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~g~~~~l~~~~~g~i~vd~~~ 269 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAV--LKQEDNSMLCKCDEYGSIVVDFSM 269 (311)
T ss_dssp TTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGG--GBCTTSCBSSCBCTTSCBCCCTTC
T ss_pred CCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhh--hhcccccceeEeccCCCEEeCCcc
Confidence 799999999999998775542 45554 565 6899999999999999987 4555 3888888999999999
Q ss_pred CCCCCCeEEecccCCC-CCChHHHHHHHHHHHHHHh
Q 042564 325 RTNVPSIWAVGDVTNR-MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 325 ~t~~~~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 359 (498)
||++|+|||+|||+.. ++++..|..||+++|.||.
T Consensus 270 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 305 (311)
T 2q0l_A 270 KTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVI 305 (311)
T ss_dssp BCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHH
Confidence 9999999999999986 6889999999999999985
No 55
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.4e-37 Score=302.59 Aligned_cols=287 Identities=23% Similarity=0.308 Sum_probs=217.8
Q ss_pred cCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcC
Q 042564 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSY 98 (498)
Q Consensus 19 ~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 98 (498)
.|+.++||+|||||++|+++|+.|++.|++|+|+| +...||.|.+..++.. ++.+
T Consensus 12 ~m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~~~gg~~~~~~~~~~---------------~~~~ 66 (319)
T 3cty_A 12 EKERDFDVVIVGAGAAGFSAAVYAARSGFSVAILD----------KAVAGGLTAEAPLVEN---------------YLGF 66 (319)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SSSTTGGGGGCSCBCC---------------BTTB
T ss_pred cccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEe----------CCCCCccccccchhhh---------------cCCC
Confidence 45567999999999999999999999999999999 4567888876544321 0011
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEe--CCEEEEEeCCCceEEEEcCeEEEcCCCC
Q 042564 99 GWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVG--PNEVEVTQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~--~~~~~v~~~~g~~~~~~~d~liiAtG~~ 176 (498)
..++...+. ..+...+.+.+++++.+++..++ .+.+.|.+ ++. .+.||+||+|||+.
T Consensus 67 -------~~~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~-~~~--~~~~~~li~AtG~~ 125 (319)
T 3cty_A 67 -------KSIVGSELA-----------KLFADHAANYAKIREGVEVRSIKKTQGGFDIET-NDD--TYHAKYVIITTGTT 125 (319)
T ss_dssp -------SSBCHHHHH-----------HHHHHHHHTTSEEEETCCEEEEEEETTEEEEEE-SSS--EEEEEEEEECCCEE
T ss_pred -------cccCHHHHH-----------HHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEE-CCC--EEEeCEEEECCCCC
Confidence 012222222 22334455678888876666554 45666766 443 78999999999999
Q ss_pred CCCCCCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHH
Q 042564 177 AQRAPIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARN 251 (498)
Q Consensus 177 p~~p~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~ 251 (498)
|..|++||.+. +............+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+. .++. +.+.
T Consensus 126 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~--~~~~----l~~~ 199 (319)
T 3cty_A 126 HKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM--CENA----YVQE 199 (319)
T ss_dssp ECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC--SCHH----HHHH
T ss_pred cccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC--CCHH----HHHH
Confidence 99998888642 11222222222346899999999999999999999999999999987653 3443 4455
Q ss_pred HHhCCCEEEcCccEEEEEEeCC-eEEEEEC---CCe--EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCC
Q 042564 252 LEGRGINLHPRTTIKELIKSEE-GVKVITD---HGE--EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSR 325 (498)
Q Consensus 252 l~~~Gv~i~~~~~v~~i~~~~~-~~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~ 325 (498)
+.+.||++++++.+.++..+++ ...+.+. +|+ ++++|.||+|+|+.||.++ +++.|++++++|+|.||++++
T Consensus 200 l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~~~g~i~vd~~~~ 277 (319)
T 3cty_A 200 IKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSF--LKDSGVKLDERGYIVVDSRQR 277 (319)
T ss_dssp HHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGG--GTTSCCCBCTTSCBCCCTTCB
T ss_pred HhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHH--HhhccccccCCccEeCCCCCc
Confidence 6688999999999999987654 2344443 564 6899999999999999987 567788899899999999999
Q ss_pred CCCCCeEEecccCCC-CCChHHHHHHHHHHHHHHh
Q 042564 326 TNVPSIWAVGDVTNR-MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 326 t~~~~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 359 (498)
|+.|+|||+|||+.. +.+++.|..||+++|.+|.
T Consensus 278 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 278 TSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp CSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHH
Confidence 999999999999986 5789999999999999985
No 56
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=6.5e-38 Score=304.37 Aligned_cols=281 Identities=15% Similarity=0.173 Sum_probs=208.4
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccc-ccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCV-IRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~-~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
+++|||+||||||||++||++|++.|++|+||| +...||.+. +..+++
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie----------~~~~gg~~~~~~~~~~--------------------- 52 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFD----------NNTNRNRVTQNSHGFI--------------------- 52 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------CSCCGGGGSSCBCCST---------------------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEe----------CCCCCCeeeeecCCcc---------------------
Confidence 356999999999999999999999999999999 455566542 111111
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEE---eCCEEEEEeCCCceEEEEcCeEEEcCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIV---GPNEVEVTQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i---~~~~~~v~~~~g~~~~~~~d~liiAtG~~ 176 (498)
....+.+.++..... ++..+...+.++.+.+..+ +...+++.+.+|+ +++||+||||||++
T Consensus 53 ----~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~--~~~a~~liiATGs~ 116 (304)
T 4fk1_A 53 ----TRDGIKPEEFKEIGL----------NEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHT--KYLAERVLLATGMQ 116 (304)
T ss_dssp ----TCTTBCHHHHHHHHH----------HHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCC--EEEEEEEEECCCCE
T ss_pred ----CCCCCCHHHHHHHHH----------HHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCC--EEEeCEEEEccCCc
Confidence 011233333332221 1222223567776665543 4456778887776 89999999999999
Q ss_pred CCCCCCCCCCc-----ccChHHHhccccCCCeEEEEcCCH-HHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHH
Q 042564 177 AQRAPIPGQEL-----AITSDEALSLEELPKRAVVLGGGY-IAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR 250 (498)
Q Consensus 177 p~~p~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~-~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~ 250 (498)
|+.|++||.+. +.+..........+++++|||+|. .++|+|..+.+.+.+|+++.+.+.+ . +.+.+
T Consensus 117 p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~----~----~~~~~ 188 (304)
T 4fk1_A 117 EEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL----S----QTIMD 188 (304)
T ss_dssp EECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC----C----HHHHH
T ss_pred cccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc----h----hhhhh
Confidence 99999999643 233333333444567788888875 5689999999999999999886543 2 33556
Q ss_pred HHHhCCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCC
Q 042564 251 NLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVP 329 (498)
Q Consensus 251 ~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~ 329 (498)
.+++.|+.++.+ .+..+..++.. ..+.+.+|+++++|.+++++|.+|+..+ +++.|++++++|+|.||+++|||+|
T Consensus 189 ~l~~~g~~~~~~-~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~--~~~~g~~~~~~G~I~vd~~~~Ts~p 265 (304)
T 4fk1_A 189 ELSNKNIPVITE-SIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQF--IEQLGCELQSNGTFVIDDFGRTSEK 265 (304)
T ss_dssp HHHTTTCCEECS-CEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCH--HHHTTCCCCTTSSSCSSTTCBCSST
T ss_pred hhhccceeEeee-eEEEeecCCCeeeeeeccccceeeecceeeeeccccCChh--hhhcCeEECCCCCEEECcCCccCCC
Confidence 778899999887 57777655444 5688899999999999988888777765 6788999999999999999999999
Q ss_pred CeEEecccCCC-CCChHHHHHHHHHHHHHHh
Q 042564 330 SIWAVGDVTNR-MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 330 ~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 359 (498)
||||+|||++. +..+..|..||+.||..|.
T Consensus 266 ~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 266 NIYLAGETTTQGPSSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp TEEECSHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEeccCCCcchHHHHHHHHHHHHHHHHH
Confidence 99999999964 5568899999999998773
No 57
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=2.3e-37 Score=302.76 Aligned_cols=284 Identities=23% Similarity=0.321 Sum_probs=220.2
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
++||+|||||+||+++|+.|++.|++|+||| +. +||.|.+.+++.. +
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~-~gg~~~~~~~~~~----------------------~ 61 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIG----------ET-PGGQLTEAGIVDD----------------------Y 61 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----------SS-TTGGGGGCCEECC----------------------S
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEe----------cc-CCCeecccccccc----------------------c
Confidence 5899999999999999999999999999999 44 7888865332210 0
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCC--EEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPN--EVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~--~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
.......... +..++...+.+.+++++..++..++.. .+.+.+.++. .+.||+||+|||+.|..|
T Consensus 62 ~~~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~--~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 62 LGLIEIQASD-----------MIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKG--EFKADSVILGIGVKRRKL 128 (323)
T ss_dssp TTSTTEEHHH-----------HHHHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSSC--EEEEEEEEECCCCEECCC
T ss_pred CCCCCCCHHH-----------HHHHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCCC--EEEcCEEEECcCCCCccC
Confidence 0001111122 223344556667899888767766543 5777777755 899999999999999999
Q ss_pred CCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhC
Q 042564 181 PIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGR 255 (498)
Q Consensus 181 ~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~ 255 (498)
++||.+. +............+++++|+|+|.+|+|+|..|.+.|.+|+++++.+.+++ ++++ +.+.+++.
T Consensus 129 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~~---~~~~~~~~ 203 (323)
T 3f8d_A 129 GVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA--QPIY---VETVKKKP 203 (323)
T ss_dssp CCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS--CHHH---HHHHHTCT
T ss_pred CCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc--CHHH---HHHHHhCC
Confidence 9998753 112122222233578999999999999999999999999999999887765 3433 23333455
Q ss_pred CCEEEcCccEEEEEEeCCeEEEEECC---Ce--EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCC
Q 042564 256 GINLHPRTTIKELIKSEEGVKVITDH---GE--EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPS 330 (498)
Q Consensus 256 Gv~i~~~~~v~~i~~~~~~~~v~~~~---g~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~ 330 (498)
||++++++.+.++..+++...+++.+ |+ ++++|.||+|+|++|+.++ ++..+++++++|+|.||++++|+.||
T Consensus 204 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~--~~~~g~~~~~~g~i~vd~~~~t~~~~ 281 (323)
T 3f8d_A 204 NVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDF--AKSNGIETDTNGYIKVDEWMRTSVPG 281 (323)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHH--HHHTTCCBCTTSSBCCCTTCBCSSTT
T ss_pred CcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhH--HhhcCeeecCCCcEecCCCceecCCC
Confidence 99999999999998775545566654 65 7999999999999999886 67888999999999999999999999
Q ss_pred eEEecccCCC---CCChHHHHHHHHHHHHHHh
Q 042564 331 IWAVGDVTNR---MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 331 iya~GD~~~~---~~~~~~A~~~g~~aa~~i~ 359 (498)
|||+|||+.. +..+..|..||+.+|++|.
T Consensus 282 vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 282 VFAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp EEECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred EEEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 9999999985 7889999999999999985
No 58
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=7.3e-37 Score=298.25 Aligned_cols=289 Identities=20% Similarity=0.225 Sum_probs=222.1
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEE-EccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGI-CELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~l-vek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
.++||+|||||+||+++|..|++.|++|+| +| +..+||.|.+..+++. ++.+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e----------~~~~gG~~~~~~~~~~---------------~~~~-- 55 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFE----------KGMPGGQITSSSEIEN---------------YPGV-- 55 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEEC----------SSSTTGGGGGCSCBCC---------------STTC--
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEe----------CCCCCceeeeeceecc---------------CCCC--
Confidence 458999999999999999999999999999 99 5567898876655431 0000
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEE-eC--CEEEEEeCCCceEEEEcCeEEEcCCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIV-GP--NEVEVTQLDGTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i-~~--~~~~v~~~~g~~~~~~~d~liiAtG~~p 177 (498)
.......++ ..++...+.+.+++++.+++..+ +. +.+.+....+. .+.||+||+|||+.|
T Consensus 56 ----~~~~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~--~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 56 ----AQVMDGISF-----------MAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGK--TELAKAVIVCTGSAP 118 (315)
T ss_dssp ----CSCBCHHHH-----------HHHHHHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSC--EEEEEEEEECCCEEE
T ss_pred ----CCCCCHHHH-----------HHHHHHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCC--EEEeCEEEEeeCCCC
Confidence 011222222 23344556677999988877766 44 55664233332 899999999999999
Q ss_pred CCCCCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHH
Q 042564 178 QRAPIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNL 252 (498)
Q Consensus 178 ~~p~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l 252 (498)
+.|++||.+. +.+..........+++++|+|+|.+|+|+|..|.+.+.+|+++++.+.+. .++++ +.+.+
T Consensus 119 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~--~~~~~---~~~~~ 193 (315)
T 3r9u_A 119 KKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR--AAPST---VEKVK 193 (315)
T ss_dssp CCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB--SCHHH---HHHHH
T ss_pred CCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC--CCHHH---HHHHH
Confidence 9999998753 22333333334457899999999999999999999999999999988752 34443 34455
Q ss_pred HhCCCEEEcCccEEEEEEeCCe-EEEEEC--CCe--EEEcCEEEEecCCCcCCCCCCc-ccCC-ceeCCCCCeEcCCCCC
Q 042564 253 EGRGINLHPRTTIKELIKSEEG-VKVITD--HGE--EIVADVVLFATGRAPNTKRLNL-KAVG-VEVDQTGAVKVDENSR 325 (498)
Q Consensus 253 ~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~--~g~--~i~~D~vi~a~G~~p~~~~l~l-~~~g-i~~~~~g~i~vd~~~~ 325 (498)
++.||++++++.+.++..+++. ..+++. +|+ ++++|.||+|+|++|+..++.. +.+| ++++++|+|.||++++
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~ 273 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQ 273 (315)
T ss_dssp HCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCB
T ss_pred hcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcc
Confidence 6889999999999999887644 234443 775 7899999999999999998543 3465 8899999999999999
Q ss_pred CCCCCeEEecccCC-CCCChHHHHHHHHHHHHHHh
Q 042564 326 TNVPSIWAVGDVTN-RMNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 326 t~~~~iya~GD~~~-~~~~~~~A~~~g~~aa~~i~ 359 (498)
|++|+|||+|||+. .+..+..|..||+.||.+|.
T Consensus 274 t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 274 TSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp CSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 99999999999986 47789999999999999985
No 59
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.6e-37 Score=303.36 Aligned_cols=293 Identities=20% Similarity=0.262 Sum_probs=220.1
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
.++||+|||||+||+++|..|++.|++|+|||+ ...+||.|.+. .|++.+ +.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~---------~~~~gg~~~~~--~~~~~~-----------------~~ 55 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDP---------LPEPGGQLTAL--YPEKYI-----------------YD 55 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES---------SSSSCHHHHHT--CTTSEE-----------------CC
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCeeecc--CCCcee-----------------ec
Confidence 468999999999999999999999999999995 34578887432 221100 00
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEeCCCceEEEEcCeEEEcCCC---
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQLDGTKLSYSAKHILIATGS--- 175 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~~~g~~~~~~~d~liiAtG~--- 175 (498)
....+.+++..+. ..+...+.+.+++++.++ +..++ .+.+.|.+.+|. .+.||+||+|||+
T Consensus 56 ~~~~~~~~~~~~~-----------~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~--~~~~~~lv~AtG~~~~ 122 (335)
T 2zbw_A 56 VAGFPKVYAKDLV-----------KGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGN--AYTAKAVIIAAGVGAF 122 (335)
T ss_dssp STTCSSEEHHHHH-----------HHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSC--EEEEEEEEECCTTSEE
T ss_pred cCCCCCCCHHHHH-----------HHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCC--EEEeCEEEECCCCCCC
Confidence 0011122232222 223344555678887664 55543 346778777664 7899999999998
Q ss_pred CCCCCCCCCCCcccCh---HHHhccc-cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHH
Q 042564 176 RAQRAPIPGQELAITS---DEALSLE-ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARN 251 (498)
Q Consensus 176 ~p~~p~i~g~~~~~~~---~~~~~l~-~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~ 251 (498)
.|..|+++|.+..... ..+.... ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+ .++..+.+.+.
T Consensus 123 ~p~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~--~~~~~~~l~~~ 200 (335)
T 2zbw_A 123 EPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA--HEASVKELMKA 200 (335)
T ss_dssp EECCCCCTTTTTTBTTTEESSCSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS--CHHHHHHHHHH
T ss_pred CCCCCCCCChhhccCcEEEEecCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc--cHHHHHHHHhc
Confidence 5777888886432110 0011112 2478999999999999999999999999999999887654 46677888889
Q ss_pred HHhCCCEEEcCccEEEEEEeCCeEEEEEC---CC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCC
Q 042564 252 LEGRGINLHPRTTIKELIKSEEGVKVITD---HG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRT 326 (498)
Q Consensus 252 l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t 326 (498)
+++.||++++++.|.++..+++...+.+. +| +++++|.||+|+|++|+.++ +++.+++++ +|+|.||++++|
T Consensus 201 l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~~~~t 277 (335)
T 2zbw_A 201 HEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGP--LANWGLALE-KNKIKVDTTMAT 277 (335)
T ss_dssp HHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGG--GGGSCCCEE-TTEEECCTTCBC
T ss_pred cccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchH--hhhcceecc-CCeeeeCCCCCC
Confidence 99999999999999999875443355554 66 57999999999999999987 577788887 689999999999
Q ss_pred CCCCeEEecccCC---CCCChHHHHHHHHHHHHHHhC
Q 042564 327 NVPSIWAVGDVTN---RMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 327 ~~~~iya~GD~~~---~~~~~~~A~~~g~~aa~~i~~ 360 (498)
++|+|||+|||+. .+.++..|..||+++|+||.+
T Consensus 278 ~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 278 SIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp SSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHH
Confidence 9999999999985 357889999999999999864
No 60
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.1e-36 Score=296.51 Aligned_cols=282 Identities=23% Similarity=0.326 Sum_probs=216.1
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+|||+||||||+|+++|..|++.|.+|+|+| . ..||.|....+++. +
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~----------~-~~gG~~~~~~~~~~------------------~---- 47 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMG----------E-RFGGQILDTVDIEN------------------Y---- 47 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEC----------S-STTGGGGGCCEECC------------------B----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEe----------C-CCCceecccccccc------------------c----
Confidence 4899999999999999999999999999999 2 36888865443331 0
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEe-EEEEEeCC-----EEEEEeCCCceEEEEcCeEEEcCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG-EGKIVGPN-----EVEVTQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~~~~i~~~-----~~~v~~~~g~~~~~~~d~liiAtG~~ 176 (498)
......+... +...+...+.+.+++++.+ ++..++.. .+.|.+.+|. .+.||+||+|||+.
T Consensus 48 ~~~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~--~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 48 ISVPKTEGQK-----------LAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGA--VLKARSIIVATGAK 114 (310)
T ss_dssp TTBSSEEHHH-----------HHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSC--EEEEEEEEECCCEE
T ss_pred cCcCCCCHHH-----------HHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCC--EEEeCEEEECcCCC
Confidence 0001112222 2233445566789999998 57777543 6778777765 78999999999999
Q ss_pred CCCCCCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHH
Q 042564 177 AQRAPIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARN 251 (498)
Q Consensus 177 p~~p~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~ 251 (498)
|..|++||.+. +............+++++|||+|++|+|+|..|.+.+.+|+++++.+.+. +++. +.+.
T Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~----~~~~ 188 (310)
T 1fl2_A 115 WRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--ADQV----LQDK 188 (310)
T ss_dssp ECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--SCHH----HHHH
T ss_pred cCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--ccHH----HHHH
Confidence 99888988743 22222222222357899999999999999999999999999999988752 4543 4455
Q ss_pred HHh-CCCEEEcCccEEEEEEeCCeE-EEEEC---CCe--EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCC
Q 042564 252 LEG-RGINLHPRTTIKELIKSEEGV-KVITD---HGE--EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENS 324 (498)
Q Consensus 252 l~~-~Gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~ 324 (498)
+++ .||++++++.+.++..+++.+ .+.+. +|+ ++++|.|++|+|++||.+++ ++ .+.++++|+|.||+++
T Consensus 189 l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l--~~-~l~~~~~g~i~vd~~~ 265 (310)
T 1fl2_A 189 LRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWL--EG-AVERNRMGEIIIDAKC 265 (310)
T ss_dssp HHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--TT-TSCBCTTSCBCCCTTC
T ss_pred HhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHH--hc-cccccCCCcEEcCCCC
Confidence 666 699999999999998765443 45543 353 68999999999999999874 43 3778888999999999
Q ss_pred CCCCCCeEEecccCCCC-CChHHHHHHHHHHHHHHh
Q 042564 325 RTNVPSIWAVGDVTNRM-NLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 325 ~t~~~~iya~GD~~~~~-~~~~~A~~~g~~aa~~i~ 359 (498)
+|+.|+|||+|||+..+ ..+..|..||+.+|.+|.
T Consensus 266 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 301 (310)
T 1fl2_A 266 ETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 301 (310)
T ss_dssp BCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHH
Confidence 99999999999999864 678899999999999986
No 61
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.2e-36 Score=297.51 Aligned_cols=287 Identities=21% Similarity=0.254 Sum_probs=219.8
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
..+||+|||||+||+++|..|++.|++|+|+| +..+||.|.....+. ..+.+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~~~gg~~~~~~~~~---------------~~~~~~-- 56 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLIT----------GMEKGGQLTTTTEVE---------------NWPGDP-- 56 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEEC----------CSSTTGGGGGCSBCC---------------CSTTCC--
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEc----------cCCCCceEecchhhh---------------hCCCCC--
Confidence 35899999999999999999999999999999 456788875433211 001110
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeC--CEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGP--NEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~--~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
..+....+. .++...+.+.+++++.+++..++. +.+.+ ..++. .+.||+||+|||+.|..
T Consensus 57 ----~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~v-~~~~~--~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 57 ----NDLTGPLLM-----------ERMHEHATKFETEIIFDHINKVDLQNRPFRL-NGDNG--EYTCDALIIATGASARY 118 (320)
T ss_dssp ----SSCBHHHHH-----------HHHHHHHHHTTCEEECCCEEEEECSSSSEEE-EESSC--EEEEEEEEECCCEEECC
T ss_pred ----CCCCHHHHH-----------HHHHHHHHHCCCEEEEeeeeEEEecCCEEEE-EeCCC--EEEcCEEEECCCCCcCC
Confidence 012222222 223344556789999888777764 34555 44544 78999999999999999
Q ss_pred CCCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHh
Q 042564 180 APIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEG 254 (498)
Q Consensus 180 p~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~ 254 (498)
|++||.+. +.+..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++.+.+.+.+.+++
T Consensus 119 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~ 196 (320)
T 1trb_A 119 LGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVEN 196 (320)
T ss_dssp CCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--CCHHHHHHHHHHHHT
T ss_pred CCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--cCHHHHHHHHHhccc
Confidence 88887532 22222222223457899999999999999999999999999999987654 477888888899999
Q ss_pred CCCEEEcCccEEEEEEeCCe-EEEEECC----C--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCC---
Q 042564 255 RGINLHPRTTIKELIKSEEG-VKVITDH----G--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENS--- 324 (498)
Q Consensus 255 ~Gv~i~~~~~v~~i~~~~~~-~~v~~~~----g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~--- 324 (498)
.||++++++.|.++..+++. ..+++.+ | +++++|.||+|+|++|+.+++ + .+++++ +|+|.||+++
T Consensus 197 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~--~-~~l~~~-~G~i~vd~~~~~~ 272 (320)
T 1trb_A 197 GNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF--E-GQLELE-NGYIKVQSGIHGN 272 (320)
T ss_dssp SSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGG--T-TTSCEE-TTEECCCCSSSSC
T ss_pred CCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHh--c-cccccc-CceEEECCCcccc
Confidence 99999999999999876644 3355543 4 579999999999999999874 3 467788 8999999987
Q ss_pred --CCCCCCeEEecccCCC-CCChHHHHHHHHHHHHHHh
Q 042564 325 --RTNVPSIWAVGDVTNR-MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 325 --~t~~~~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 359 (498)
+|++|+|||+|||+.. +..+..|..+|+.||.+|.
T Consensus 273 ~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 273 ATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp TTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHH
Confidence 8999999999999986 5678899999999999985
No 62
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.4e-36 Score=293.71 Aligned_cols=276 Identities=17% Similarity=0.211 Sum_probs=211.6
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
++||+|||||++|+++|..|++.|.+|+|+|+ ....+.+.... +++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~----------~~~~~~~~~~~----------------------~~~-- 47 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDA----------GERRNRFASHS----------------------HGF-- 47 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC----------CCCGGGGCSCC----------------------CSS--
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeC----------CCcccccchhh----------------------cCC--
Confidence 48999999999999999999999999999994 22222211000 000
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhC-CcEEEEeEEEEEe--CCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVG--PNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~~~~i~--~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
......++..+.. ++...+.+. +++++.+++..++ .+.+.+.+.+++ .+.||+||+|||+.|+.
T Consensus 48 ~~~~~~~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~--~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 48 LGQDGKAPGEIIA-----------EARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGR--RETAGRLILAMGVTDEL 114 (297)
T ss_dssp TTCTTCCHHHHHH-----------HHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSC--EEEEEEEEECCCCEEEC
T ss_pred cCCCCCCHHHHHH-----------HHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCC--EEEcCEEEECCCCCCCC
Confidence 0111223333322 233344454 7888888877665 346788887765 79999999999999999
Q ss_pred CCCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHh
Q 042564 180 APIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEG 254 (498)
Q Consensus 180 p~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~ 254 (498)
|++||.+. .++..........+++++|+|+|.+|+|+|..|.+.| +|+++.+.+. .+++ .+.+.+++
T Consensus 115 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~---~~~~----~~~~~l~~ 186 (297)
T 3fbs_A 115 PEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV---EPDA----DQHALLAA 186 (297)
T ss_dssp CCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---CCCH----HHHHHHHH
T ss_pred CCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---CCCH----HHHHHHHH
Confidence 99998753 2222222223345789999999999999999999999 9999988765 2333 45677888
Q ss_pred CCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeC--CCC-CeEcCCCCCCCCCCe
Q 042564 255 RGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVD--QTG-AVKVDENSRTNVPSI 331 (498)
Q Consensus 255 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~--~~g-~i~vd~~~~t~~~~i 331 (498)
.||+++. +.|.++..++ .+++.+|+++++|.|++|+|++|+.++ +++.+++++ ++| +|.||++++|++|+|
T Consensus 187 ~gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~p~~~~--~~~~g~~~~~~~~G~~i~vd~~~~t~~~~v 260 (297)
T 3fbs_A 187 RGVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLRITVDW--IEKLGCAVEEGPMGSTIVTDPMKQTTARGI 260 (297)
T ss_dssp TTCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEECCCSC--HHHHTCCEEEETTEEEECCCTTCBCSSTTE
T ss_pred CCcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcccCchh--HHhcCCccccCCCCceEEeCCCCccCCCCE
Confidence 9999996 8999986432 688889999999999999999999986 677788776 457 899999999999999
Q ss_pred EEecccCCCCCChHHHHHHHHHHHHHHh
Q 042564 332 WAVGDVTNRMNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 332 ya~GD~~~~~~~~~~A~~~g~~aa~~i~ 359 (498)
||+|||+..++.++.|..||+.+|.+|.
T Consensus 261 ya~GD~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 261 FACGDVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp EECSGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCchHHHHHHHHhHHHHHHHHH
Confidence 9999999988999999999999999985
No 63
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1.6e-36 Score=298.90 Aligned_cols=294 Identities=21% Similarity=0.218 Sum_probs=216.1
Q ss_pred ccCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhc
Q 042564 18 EQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARS 97 (498)
Q Consensus 18 ~~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~ 97 (498)
..+.+++||+|||||++|+++|+.|++.|++|+|+|+.. .....+||.+.....++. ++.
T Consensus 17 ~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~-----~~~~~~gg~~~~~~~~~~---------------~~~ 76 (338)
T 3itj_A 17 RGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM-----ANGIAAGGQLTTTTEIEN---------------FPG 76 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-----BTTBCTTCGGGGSSEECC---------------STT
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC-----CCCCCcCcccccchhhcc---------------cCC
Confidence 334456899999999999999999999999999999411 112356777654321110 000
Q ss_pred CCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeC--CEEEEEeC---CCceEEEEcCeEEEc
Q 042564 98 YGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGP--NEVEVTQL---DGTKLSYSAKHILIA 172 (498)
Q Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~--~~~~v~~~---~g~~~~~~~d~liiA 172 (498)
+. ..+... .+..++...+.+.+++++.+++..++. +.+.+... ++ ..+.||+||+|
T Consensus 77 ~~------~~~~~~-----------~~~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~--~~~~~d~vvlA 137 (338)
T 3itj_A 77 FP------DGLTGS-----------ELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDA--EPVTTDAIILA 137 (338)
T ss_dssp CT------TCEEHH-----------HHHHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSS--CCEEEEEEEEC
T ss_pred Cc------ccCCHH-----------HHHHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCC--cEEEeCEEEEC
Confidence 00 001111 222334455667799999988766654 45666552 33 37899999999
Q ss_pred CCCCCCCCCCCCCCc-----ccChHHHhcc--ccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHH
Q 042564 173 TGSRAQRAPIPGQEL-----AITSDEALSL--EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMR 245 (498)
Q Consensus 173 tG~~p~~p~i~g~~~-----~~~~~~~~~l--~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~ 245 (498)
||+.|..|++||.+. +......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++ .
T Consensus 138 tG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------~ 211 (338)
T 3itj_A 138 TGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------S 211 (338)
T ss_dssp CCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------C
T ss_pred cCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------C
Confidence 999999999998642 2222222222 23578999999999999999999999999999999887654 2
Q ss_pred HHHHHHHHhC-CCEEEcCccEEEEEEeCCe-EEEEECC-----CeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCe
Q 042564 246 AVVARNLEGR-GINLHPRTTIKELIKSEEG-VKVITDH-----GEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAV 318 (498)
Q Consensus 246 ~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~-~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i 318 (498)
+.+.+.+.+. ||++++++.+.++..+++. ..+++.+ ++++++|.||+|+|++|+..++ +. ++.++++|+|
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~~-~l~~~~~G~i 288 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIV--AG-QVDTDEAGYI 288 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGG--BT-TBCBCTTSCB
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHh--hC-ceEecCCCcE
Confidence 3344555554 9999999999999887654 3355544 4579999999999999999874 34 8999999999
Q ss_pred Ec-CCCCCCCCCCeEEecccCCC-CCChHHHHHHHHHHHHHHh
Q 042564 319 KV-DENSRTNVPSIWAVGDVTNR-MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 319 ~v-d~~~~t~~~~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 359 (498)
.| |++++|+.|+|||+|||+.. +..+..|..||+.||.+|.
T Consensus 289 ~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 289 KTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp CCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred EEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHH
Confidence 95 88999999999999999985 6788999999999999985
No 64
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.7e-36 Score=297.20 Aligned_cols=289 Identities=20% Similarity=0.260 Sum_probs=214.3
Q ss_pred cCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcC
Q 042564 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSY 98 (498)
Q Consensus 19 ~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~ 98 (498)
.|+..+||+|||||++|+++|..|++.|++|+|+| +..+||.|.....+. .++.+
T Consensus 10 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie----------~~~~gg~~~~~~~~~---------------~~~~~ 64 (335)
T 2a87_A 10 AHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFE----------GTSFGGALMTTTDVE---------------NYPGF 64 (335)
T ss_dssp CCCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEC----------CSSCSCGGGSCSCBC---------------CSTTC
T ss_pred ccCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEe----------cCCCCCceeccchhh---------------hcCCC
Confidence 34556999999999999999999999999999999 456788875432211 00111
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeC-CEEEE-EeCCCceEEEEcCeEEEcCCCC
Q 042564 99 GWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGP-NEVEV-TQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~-~~~~v-~~~~g~~~~~~~d~liiAtG~~ 176 (498)
. ..+....+. .++...+.+.+++++.+++..++. +.+.| .+.++. .+.||+||+|||+.
T Consensus 65 ~------~~~~~~~~~-----------~~l~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~--~~~~d~lviAtG~~ 125 (335)
T 2a87_A 65 R------NGITGPELM-----------DEMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQ--THRARAVILAMGAA 125 (335)
T ss_dssp T------TCBCHHHHH-----------HHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTSC--EEEEEEEEECCCEE
T ss_pred C------CCCCHHHHH-----------HHHHHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCCC--EEEeCEEEECCCCC
Confidence 0 012222222 223344556789999888776664 33555 565654 79999999999999
Q ss_pred CCCCCCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHH
Q 042564 177 AQRAPIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARN 251 (498)
Q Consensus 177 p~~p~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~ 251 (498)
|..|++||.+. +.+..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+. .+.
T Consensus 126 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~--~~~~~---~~~ 200 (335)
T 2a87_A 126 ARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA--SKIML---DRA 200 (335)
T ss_dssp ECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS--CTTHH---HHH
T ss_pred ccCCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc--cHHHH---HHH
Confidence 99998888542 222222222234578999999999999999999999999999999877543 22221 234
Q ss_pred HHhCCCEEEcCccEEEEEEeCCeEEEEEC---CC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCC-CC
Q 042564 252 LEGRGINLHPRTTIKELIKSEEGVKVITD---HG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDEN-SR 325 (498)
Q Consensus 252 l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~-~~ 325 (498)
+++.||++++++.+.++..+++...+.+. +| +++++|.||+|+|++|+.+++ + .+++++++|+|.||++ ++
T Consensus 201 ~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~~ 277 (335)
T 2a87_A 201 RNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLV--R-EAIDVDPDGYVLVQGRTTS 277 (335)
T ss_dssp HHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTT--B-TTBCBCTTSCBCCSTTSSB
T ss_pred hccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHh--h-cccccCCCccEEeCCCCCc
Confidence 56789999999999999866532233332 44 579999999999999999874 3 4788888899999996 68
Q ss_pred CCCCCeEEecccCCC-CCChHHHHHHHHHHHHHHh
Q 042564 326 TNVPSIWAVGDVTNR-MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 326 t~~~~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 359 (498)
|+.|+|||+|||+.. +..+..|..||+.+|.++.
T Consensus 278 t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 278 TSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp CSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 999999999999986 5778899999999999985
No 65
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=2.4e-36 Score=300.60 Aligned_cols=295 Identities=22% Similarity=0.244 Sum_probs=218.2
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
|+.++||+|||||++|+++|+.|++.|++|+|||+ ...+||.|.+. .|.+.+ +
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~---------~~~~gg~~~~~--~~~~~~---------------~- 63 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIES---------MPQLGGQLAAL--YPEKHI---------------Y- 63 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCHHHHHT--CTTSEE---------------C-
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEec---------CCCCCCccccc--CCCccc---------------c-
Confidence 44569999999999999999999999999999995 34578887532 121100 0
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC---CEEEEEeCCCceEEEEcCeEEEcCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP---NEVEVTQLDGTKLSYSAKHILIATGS 175 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~---~~~~v~~~~g~~~~~~~d~liiAtG~ 175 (498)
.....+.++...+. ..+...+.+.+++++.+. +..++. +.+.|.+.+|. .+.||+||+|||+
T Consensus 64 -~~~~~~~~~~~~~~-----------~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~--~~~~~~li~AtG~ 129 (360)
T 3ab1_A 64 -DVAGFPEVPAIDLV-----------ESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGN--VYRSRAVLIAAGL 129 (360)
T ss_dssp -CSTTCSSEEHHHHH-----------HHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSC--EEEEEEEEECCTT
T ss_pred -cCCCCCCCCHHHHH-----------HHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCc--EEEeeEEEEccCC
Confidence 00011112222222 223344556688887664 555542 26778777764 7999999999998
Q ss_pred ---CCCCCCCCC-CCcccC--h-HHHhccc-cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHH
Q 042564 176 ---RAQRAPIPG-QELAIT--S-DEALSLE-ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAV 247 (498)
Q Consensus 176 ---~p~~p~i~g-~~~~~~--~-~~~~~l~-~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~ 247 (498)
.|..|+++| .+.... . ..+.... ..+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.+. +.+.+.
T Consensus 130 ~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--~~~~~~ 207 (360)
T 3ab1_A 130 GAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH--GKTAHE 207 (360)
T ss_dssp CSCCBCCCGGGCCCTTTBTTTEESSCSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC--SHHHHS
T ss_pred CcCCCCCCCCCCchhhCcCceEEEecCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC--HHHHHH
Confidence 566777777 432111 0 0011111 24689999999999999999999999999999998876542 356677
Q ss_pred HHHHHHhCCCEEEcCccEEEEEEeCCeE-EEEE--CCC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCC
Q 042564 248 VARNLEGRGINLHPRTTIKELIKSEEGV-KVIT--DHG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDE 322 (498)
Q Consensus 248 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~v~~--~~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~ 322 (498)
+.+.+++.||++++++.|.++..+++.+ .+.+ .+| +.+++|.||+|+|++|+.++ ++..+++++ +|+|.||+
T Consensus 208 l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~-~g~i~vd~ 284 (360)
T 3ab1_A 208 VERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGP--LARWDLELY-ENALVVDS 284 (360)
T ss_dssp SHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGG--GGGSSCCEE-TTEEECCT
T ss_pred HHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHH--HHhhccccc-cCeeeecC
Confidence 8888889999999999999998875542 4444 377 57999999999999999987 567788887 68999999
Q ss_pred CCCCCCCCeEEecccCC---CCCChHHHHHHHHHHHHHHhC
Q 042564 323 NSRTNVPSIWAVGDVTN---RMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 323 ~~~t~~~~iya~GD~~~---~~~~~~~A~~~g~~aa~~i~~ 360 (498)
+++|++|+|||+|||+. .+.++..|..||+++|++|.+
T Consensus 285 ~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 285 HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp TSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHh
Confidence 99999999999999985 367889999999999999864
No 66
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=4.9e-37 Score=316.82 Aligned_cols=291 Identities=19% Similarity=0.237 Sum_probs=212.1
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+.+|||||||+||+++|.+|++.+++|+|||+...+ .+..++|. . .
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~-------------~~~PlL~~------------------v---a 87 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF-------------LFTPLLPS------------------A---P 87 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE-------------ECGGGGGG------------------T---T
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc-------------ccccchhH------------------H---h
Confidence 468999999999999999999999999999942111 11101110 0 0
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHH--HHhCCcEEEEeEEEEEeCCEEEEEeC------------------CCceE
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRL--LSNAGVKLYEGEGKIVGPNEVEVTQL------------------DGTKL 162 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~gv~~~~~~~~~i~~~~~~v~~~------------------~g~~~ 162 (498)
.+ .++...+. ..+... ..+.+++++.+++..+|+....|... .++..
T Consensus 88 ~G--~l~~~~i~-----------~p~~~~~~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (502)
T 4g6h_A 88 VG--TVDEKSII-----------EPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPA 154 (502)
T ss_dssp TT--SSCGGGGE-----------EEHHHHHTTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCE
T ss_pred hc--cccHHHhh-----------hhHHHHHHhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCce
Confidence 00 00000000 000111 12357999999999988765444321 12245
Q ss_pred EEEcCeEEEcCCCCCCCCCCCCCCc----ccChHHHhccc--------------------cCCCeEEEEcCCHHHHHHHH
Q 042564 163 SYSAKHILIATGSRAQRAPIPGQEL----AITSDEALSLE--------------------ELPKRAVVLGGGYIAVEFAS 218 (498)
Q Consensus 163 ~~~~d~liiAtG~~p~~p~i~g~~~----~~~~~~~~~l~--------------------~~~~~v~ViG~G~~g~e~a~ 218 (498)
++.||+||||||+.|+.+++||.+. +.+.++...+. ....+++|||+|++|+|+|.
T Consensus 155 ~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~ 234 (502)
T 4g6h_A 155 EIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAG 234 (502)
T ss_dssp EEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHH
T ss_pred EEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHH
Confidence 8999999999999999999999732 23444433211 01247999999999999999
Q ss_pred HHHHC--------------CCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCe-
Q 042564 219 IWRGM--------------GSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGE- 283 (498)
Q Consensus 219 ~l~~~--------------g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~- 283 (498)
.|.++ ..+|+++++.+++++.+++++++.+.+.|++.||++++++.|.+++.+.........+|+
T Consensus 235 ~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~ 314 (502)
T 4g6h_A 235 ELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKI 314 (502)
T ss_dssp HHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCE
T ss_pred HHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCccc
Confidence 88764 368999999999999999999999999999999999999999999533222334455663
Q ss_pred ---EEEcCEEEEecCCCcCCCCCC-cccCCceeCCCCCeEcCCCCCC-CCCCeEEecccCCC--CCChHHHHHHHHHHHH
Q 042564 284 ---EIVADVVLFATGRAPNTKRLN-LKAVGVEVDQTGAVKVDENSRT-NVPSIWAVGDVTNR--MNLTPVALMEGTCFAK 356 (498)
Q Consensus 284 ---~i~~D~vi~a~G~~p~~~~l~-l~~~gi~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~ 356 (498)
++++|.||||+|.+|+....+ ....+...+.+|+|.||++||| ++|||||+|||+.. ++++..|.+||+++|+
T Consensus 315 ~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ 394 (502)
T 4g6h_A 315 TEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAK 394 (502)
T ss_dssp EEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHH
T ss_pred ceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHH
Confidence 699999999999999843211 2345666778899999999998 89999999999864 7789999999999999
Q ss_pred HHhC
Q 042564 357 TVFG 360 (498)
Q Consensus 357 ~i~~ 360 (498)
||..
T Consensus 395 ni~~ 398 (502)
T 4g6h_A 395 NFDK 398 (502)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9853
No 67
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2.2e-36 Score=297.07 Aligned_cols=286 Identities=19% Similarity=0.292 Sum_probs=214.7
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
++||+|||||+||+++|+.|++.|++|+|+|+ ...+||.|.+ +.|...+ +..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~---------~~~~gG~~~~--~~~~~~~-----------------~~~ 58 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIES---------LPQLGGQLSA--LYPEKYI-----------------YDV 58 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCHHHHH--HCTTSEE-----------------CCS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEc---------CCCCCceehh--cCCCceE-----------------ecc
Confidence 48999999999999999999999999999995 4557777632 2221000 000
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC--C-EEEEEeCCCceEEEEcCeEEEcCCC---
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP--N-EVEVTQLDGTKLSYSAKHILIATGS--- 175 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~--~-~~~v~~~~g~~~~~~~d~liiAtG~--- 175 (498)
...+..... .+..++...+.+.+++++.++ +..++. + .+.|.+.+| ++.||+||+|||+
T Consensus 59 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 59 AGFPKIRAQ-----------ELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEE---THYSKTVIITAGNGAF 124 (332)
T ss_dssp TTCSSEEHH-----------HHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSE---EEEEEEEEECCTTSCC
T ss_pred CCCCCCCHH-----------HHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCC---EEEeCEEEECCCCCcC
Confidence 011111222 223334455666789988654 555543 2 567777665 4899999999999
Q ss_pred CCCCCCCCCCCcc----cChHHHhcccc-CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHH
Q 042564 176 RAQRAPIPGQELA----ITSDEALSLEE-LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR 250 (498)
Q Consensus 176 ~p~~p~i~g~~~~----~~~~~~~~l~~-~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~ 250 (498)
.|..|++||.+.. +.. .+..... .+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.+ .+.. .+
T Consensus 125 ~p~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-~~~~-----~~ 197 (332)
T 3lzw_A 125 KPRKLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-HEHS-----VE 197 (332)
T ss_dssp EECCCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-CHHH-----HH
T ss_pred CCCCCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-cHHH-----HH
Confidence 8999999987541 111 2222222 368999999999999999999999999999999887543 3322 34
Q ss_pred HHHhCCCEEEcCccEEEEEEeCCeEEEEECC-----CeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCC
Q 042564 251 NLEGRGINLHPRTTIKELIKSEEGVKVITDH-----GEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSR 325 (498)
Q Consensus 251 ~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~ 325 (498)
.+++.||++++++.+.++..+++...+++.+ ++++++|.||+|+|++|+.++ ++..++++ ++|+|.||++++
T Consensus 198 ~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~--~~~~~~~~-~~g~i~vd~~~~ 274 (332)
T 3lzw_A 198 NLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGP--IKNWGLDI-EKNSIVVKSTME 274 (332)
T ss_dssp HHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGG--GGGSSCCE-ETTEEECCTTSB
T ss_pred HHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchH--HhhcCccc-cCCeEEeCCCCc
Confidence 4788999999999999998766554555544 457999999999999999987 67788888 678999999999
Q ss_pred CCCCCeEEecccC---CCCCChHHHHHHHHHHHHHHhC
Q 042564 326 TNVPSIWAVGDVT---NRMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 326 t~~~~iya~GD~~---~~~~~~~~A~~~g~~aa~~i~~ 360 (498)
|+.|+|||+|||+ +.+.++..|..||+++|++|..
T Consensus 275 t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 275 TNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp CSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred eecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHH
Confidence 9999999999998 4578899999999999999863
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=5.7e-35 Score=287.38 Aligned_cols=289 Identities=22% Similarity=0.241 Sum_probs=211.2
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
++||+|||||++|+++|+.|++.|++|+|+|+ ..+.....||.|.....+. ..+.+.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~-----~~~~~~~~gg~~~~~~~~~---------------~~~~~~--- 64 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEG-----WMANDIAPGGQLTTTTDVE---------------NFPGFP--- 64 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECC-----SSBTTBCTTCGGGGCSEEC---------------CSTTCT---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEec-----cCccccCCCceeeeccccc---------------cCCCCc---
Confidence 58999999999999999999999999999993 0111145667664322111 001110
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeC--CEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGP--NEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~--~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
..++...+ ...+...+.+.+++++.+++..++. +.+.|.+ ++. .++||+||+|||+.|..|
T Consensus 65 ---~~~~~~~~-----------~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~~--~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 65 ---EGILGVEL-----------TDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DSK--AILADAVILAIGAVAKRL 127 (333)
T ss_dssp ---TCEEHHHH-----------HHHHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SSE--EEEEEEEEECCCEEECCC
T ss_pred ---cCCCHHHH-----------HHHHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CCc--EEEcCEEEECCCCCcCCC
Confidence 01122222 2223344556789998887666653 4566766 543 799999999999999999
Q ss_pred CCCCCCc---------ccChHHHhccc--cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHH
Q 042564 181 PIPGQEL---------AITSDEALSLE--ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVA 249 (498)
Q Consensus 181 ~i~g~~~---------~~~~~~~~~l~--~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~ 249 (498)
++||.+. +.+........ ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+ ..
T Consensus 128 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~~~~---~~ 202 (333)
T 1vdc_A 128 SFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA--SKIM---QQ 202 (333)
T ss_dssp CCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHHH---HH
T ss_pred CCCCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc--cHHH---HH
Confidence 8888643 11122222222 4578999999999999999999999999999999876532 3322 22
Q ss_pred HHHHhCCCEEEcCccEEEEEEeCC--e-EEEEEC---CC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcC
Q 042564 250 RNLEGRGINLHPRTTIKELIKSEE--G-VKVITD---HG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVD 321 (498)
Q Consensus 250 ~~l~~~Gv~i~~~~~v~~i~~~~~--~-~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd 321 (498)
+.+++.||++++++.+.++..+++ . ..+.+. +| +++++|.||+|+|++|+.+++ + .++.++++|+|.||
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd 279 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFL--D-GGVELDSDGYVVTK 279 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--T-TSSCBCTTSCBCCC
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHh--h-ccccccCCCCEEec
Confidence 445678999999999999987663 3 234443 44 579999999999999999874 3 46888888999999
Q ss_pred CC-CCCCCCCeEEecccCCC-CCChHHHHHHHHHHHHHHh
Q 042564 322 EN-SRTNVPSIWAVGDVTNR-MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 322 ~~-~~t~~~~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 359 (498)
++ ++|+.|+|||+|||+.. +..+..|..||+.||.+|.
T Consensus 280 ~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 319 (333)
T 1vdc_A 280 PGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAE 319 (333)
T ss_dssp TTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHH
Confidence 97 68999999999999986 4788899999999999985
No 69
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.4e-34 Score=300.63 Aligned_cols=284 Identities=23% Similarity=0.327 Sum_probs=217.2
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
...|||+||||||||+++|..|++.|.+|+|+| . ..||+|....+++. +
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie----------~-~~GG~~~~~~~~~~------------------~-- 258 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMG----------E-RFGGQVLDTVDIEN------------------Y-- 258 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----------S-STTGGGTTCSCBCC------------------B--
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEE----------C-CCCCcccccccccc------------------c--
Confidence 346899999999999999999999999999999 3 36888875444331 0
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEe-EEEEEeCC-----EEEEEeCCCceEEEEcCeEEEcCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEG-EGKIVGPN-----EVEVTQLDGTKLSYSAKHILIATG 174 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~~~~i~~~-----~~~v~~~~g~~~~~~~d~liiAtG 174 (498)
...+...... +...+...+.+.+++++.+ .+..++.. .+.|.+.+|. .++||+||+|||
T Consensus 259 --~~~~~~~~~~-----------l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~--~~~~d~vVlAtG 323 (521)
T 1hyu_A 259 --ISVPKTEGQK-----------LAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGA--VLKARSIIIATG 323 (521)
T ss_dssp --TTBSSBCHHH-----------HHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSC--EEEEEEEEECCC
T ss_pred --CCCCCCCHHH-----------HHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCC--EEEcCEEEECCC
Confidence 0001112222 2233445566789999998 57777642 6778777765 799999999999
Q ss_pred CCCCCCCCCCCCcc-----cChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHH
Q 042564 175 SRAQRAPIPGQELA-----ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVA 249 (498)
Q Consensus 175 ~~p~~p~i~g~~~~-----~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~ 249 (498)
+.|+.|++||.+.. ............+++|+|||+|++|+|+|..|++.+.+|+++++.+.+.. + +.+.
T Consensus 324 ~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~--~----~~l~ 397 (521)
T 1hyu_A 324 AKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA--D----QVLQ 397 (521)
T ss_dssp EEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS--C----HHHH
T ss_pred CCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc--C----HHHH
Confidence 99999989987532 11111111122468999999999999999999999999999999887653 3 3355
Q ss_pred HHHHh-CCCEEEcCccEEEEEEeCCeE-EEEEC---CCe--EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCC
Q 042564 250 RNLEG-RGINLHPRTTIKELIKSEEGV-KVITD---HGE--EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDE 322 (498)
Q Consensus 250 ~~l~~-~Gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~ 322 (498)
+.+++ .||++++++.+.++..+++.+ .+.+. +|+ ++++|.|++++|+.||++++ ++ .+.++++|+|.||+
T Consensus 398 ~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l--~~-~l~~~~~G~I~Vd~ 474 (521)
T 1hyu_A 398 DKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWL--EG-ALERNRMGEIIIDA 474 (521)
T ss_dssp HHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGG--TT-TSCBCTTSCBCCCT
T ss_pred HHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHH--hh-hhccCCCCcEEeCC
Confidence 66766 699999999999998765443 45543 353 68999999999999999874 43 47888889999999
Q ss_pred CCCCCCCCeEEecccCCC-CCChHHHHHHHHHHHHHHh
Q 042564 323 NSRTNVPSIWAVGDVTNR-MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 323 ~~~t~~~~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 359 (498)
+++|++|+|||+|||+.. ++.+..|+.+|+.||.+++
T Consensus 475 ~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 475 KCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 512 (521)
T ss_dssp TCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHH
Confidence 999999999999999986 4678999999999999985
No 70
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.1e-35 Score=294.62 Aligned_cols=313 Identities=17% Similarity=0.196 Sum_probs=216.6
Q ss_pred CccEEEECCChhHHHHHHHHHhCCC-cEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGA-KVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
++||+|||||++|+++|..|++.|. +|+|||+ ..+||+|.++.+... +....+ ....+++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~----------~~~Gg~~~~~~~~~~---~~~~~~-----~~~~~g~~ 65 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEK----------GTVGHSFKHWPKSTR---TITPSF-----TSNGFGMP 65 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECS----------SSTTHHHHTSCTTCB---CSSCCC-----CCGGGTCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEec----------CCCCCccccCccccc---ccCcch-----hcccCCch
Confidence 5899999999999999999999999 9999993 338888865432110 000000 00111210
Q ss_pred cccccccCHHHHHHHHHH--HHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCC--EEEEEeCCCceEEEEcCeEEEcCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTD--EILRLNGIYKRLLSNAGVKLYEGE-GKIVGPN--EVEVTQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~--~~~v~~~~g~~~~~~~d~liiAtG~~ 176 (498)
.......++...+..... ....+..++...+++.+++++.++ +..++.. .+.|.+.++ .+.||+||+|||+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g---~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 66 DMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE---TYHADYIFVATGDY 142 (369)
T ss_dssp CTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC---CEEEEEEEECCCST
T ss_pred hhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC---EEEeCEEEECCCCC
Confidence 000001111111100000 001233444555667899988875 5556543 577777655 58899999999987
Q ss_pred CCCCCCCCCCcccChHHHhccccC-CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC-------CCCHHHHHHH
Q 042564 177 AQRAPIPGQELAITSDEALSLEEL-PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR-------GFDDEMRAVV 248 (498)
Q Consensus 177 p~~p~i~g~~~~~~~~~~~~l~~~-~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~-------~~~~~~~~~l 248 (498)
+. |.+|+ ...++..++...... .++|+|||+|.+|+|+|..|.+.|.+|+++++.+.+++ .+++...+.+
T Consensus 143 ~~-p~ip~-~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l 220 (369)
T 3d1c_A 143 NF-PKKPF-KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRL 220 (369)
T ss_dssp TS-BCCCS-SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHH
T ss_pred Cc-cCCCC-CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHH
Confidence 65 55665 444444444444433 46999999999999999999999999999999887663 2557778889
Q ss_pred HHHHHhCC-CEEEcCccEEEEEEeCCeEEEEECCCeEEE-cCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCC-CC
Q 042564 249 ARNLEGRG-INLHPRTTIKELIKSEEGVKVITDHGEEIV-ADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDEN-SR 325 (498)
Q Consensus 249 ~~~l~~~G-v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~-~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~-~~ 325 (498)
.+.+++.| |++++++.|.++..+++...+++.+|+.+. +|.||+|+|++|+.+++ .+.+++ +++|++.||++ ++
T Consensus 221 ~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~--~~~~~~-~~~g~i~v~~~~~~ 297 (369)
T 3d1c_A 221 GNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPI--VQQLFV-TTNQDIKLTTHDES 297 (369)
T ss_dssp HHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHH--HHHHSC-CTTSCCCBCTTSBB
T ss_pred HHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccchh--hhhhcc-CCCCCEEechhhcc
Confidence 99999997 999999999999877777778888887665 69999999999999763 344555 67889999985 67
Q ss_pred CCCCCeEEecccCCCC----CChHHHHHHHHHHHHHHhCC
Q 042564 326 TNVPSIWAVGDVTNRM----NLTPVALMEGTCFAKTVFGG 361 (498)
Q Consensus 326 t~~~~iya~GD~~~~~----~~~~~A~~~g~~aa~~i~~~ 361 (498)
|++|+|||+|||+..+ .....+.+||+++|++|.+.
T Consensus 298 t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~ 337 (369)
T 3d1c_A 298 TRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQR 337 (369)
T ss_dssp SSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHH
T ss_pred cCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcc
Confidence 8999999999998752 23456788999999999864
No 71
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=9e-34 Score=281.14 Aligned_cols=300 Identities=17% Similarity=0.173 Sum_probs=205.6
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+|||+|||||++|+++|..|++.|.+|+|+|+ ...+||.|.+ +.|...+... .....+..+....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~---------~~~~gg~~~~--~~~~~~~~~~----~~~~~~~~~~~~~ 67 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDA---------EASPGGAWQH--AWHSLHLFSP----AGWSSIPGWPMPA 67 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECC---------SSSSSGGGGG--SCTTCBCSSC----GGGSCCSSSCCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC---------CCCCCCcccC--CCCCcEecCc----hhhhhCCCCCCCC
Confidence 48999999999999999999999999999995 4467888764 2221110000 0001111111110
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEE--eCCEEE-EEeCCCceEEEEcCeEEEcCC--CC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIV--GPNEVE-VTQLDGTKLSYSAKHILIATG--SR 176 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i--~~~~~~-v~~~~g~~~~~~~d~liiAtG--~~ 176 (498)
........ ..+..++...+++.+++++.++ +..+ +.+.+. |.+.++ .++||+||+||| +.
T Consensus 68 ~~~~~~~~-----------~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 68 SQGPYPAR-----------AEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR---QWLARAVISATGTWGE 133 (357)
T ss_dssp CSSSSCBH-----------HHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC---EEEEEEEEECCCSGGG
T ss_pred CccCCCCH-----------HHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC---EEEeCEEEECCCCCCC
Confidence 00001111 1223334455666788888764 4544 456777 877665 799999999999 57
Q ss_pred CCCCCCCCCCc----ccChHHHhccc-cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC-CCCCCC--CCHHHHHHH
Q 042564 177 AQRAPIPGQEL----AITSDEALSLE-ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK-ELPLRG--FDDEMRAVV 248 (498)
Q Consensus 177 p~~p~i~g~~~----~~~~~~~~~l~-~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~-~~~l~~--~~~~~~~~l 248 (498)
|..|++||.+. .+...++.... ..+++++|||+|.+|+|+|..|.+.+ +|+++.+. +.+++. ....+.+.+
T Consensus 134 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~ 212 (357)
T 4a9w_A 134 AYTPEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERA 212 (357)
T ss_dssp BCCCCCTTGGGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC-
T ss_pred CCCCCCCCccccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHH
Confidence 88899998753 22222222222 24689999999999999999999998 69999987 444443 234444333
Q ss_pred HHHHH----------------------------hCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 249 ARNLE----------------------------GRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 249 ~~~l~----------------------------~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
.+.+. +.|+ +..+..+.++.. + .+.+.+|+++++|.||+|+|++|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~--~--~v~~~~g~~i~~D~vi~a~G~~p~~ 287 (357)
T 4a9w_A 213 TERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSP--T--GMQWADGTERAFDAVIWCTGFRPAL 287 (357)
T ss_dssp ---------------------CBCCCHHHHHHHHTTC-CCEECCCSEEET--T--EEECTTSCEEECSEEEECCCBCCCC
T ss_pred HHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeC--C--eeEECCCCEecCCEEEECCCcCCCC
Confidence 33332 3444 445556666643 2 3778899999999999999999999
Q ss_pred CCCCcccCCceeCCCCCeEcCCC--CCCCCCCeEEec--ccCC-CCCChHHHHHHHHHHHHHHhC
Q 042564 301 KRLNLKAVGVEVDQTGAVKVDEN--SRTNVPSIWAVG--DVTN-RMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 301 ~~l~l~~~gi~~~~~g~i~vd~~--~~t~~~~iya~G--D~~~-~~~~~~~A~~~g~~aa~~i~~ 360 (498)
++ +++.++. +++|+|.||++ ++|+.|||||+| ||+. .+.....|..||+.+|++|..
T Consensus 288 ~~--l~~~gl~-~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 288 SH--LKGLDLV-TPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp GG--GTTTTCB-CTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHH
T ss_pred cc--cCccccc-CCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHH
Confidence 87 5778888 88899999999 899999999999 6665 466778899999999999863
No 72
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=1.8e-33 Score=286.83 Aligned_cols=282 Identities=17% Similarity=0.207 Sum_probs=206.8
Q ss_pred CccEEEECCChhHHHHHHHHHh---CCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 23 DFDLFVIGAGSGGVRAARFSAN---FGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~---~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
++||+|||||+||+++|..|++ .|.+|+|||+ .+... ..|....+.. +
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~------~~~~~----------~~~~~~~~~~-------------g 54 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISA------NDYFQ----------FVPSNPWVGV-------------G 54 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECS------SSEEE----------CGGGHHHHHH-------------T
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeC------CCCCc----------ccCCcccccc-------------C
Confidence 4699999999999999999999 8999999994 21110 0121110000 0
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
..+. +.+...+...+++.+++++.+.+..+++....|.+.+|+ ++.||+||+|||++|+.
T Consensus 55 -------~~~~-----------~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~--~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 55 -------WKER-----------DDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGN--TVHYDYLMIATGPKLAF 114 (437)
T ss_dssp -------SSCH-----------HHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSC--EEECSEEEECCCCEECG
T ss_pred -------ccCH-----------HHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCC--EEECCEEEECCCCCcCc
Confidence 0000 111122334556689999988899998876677777765 79999999999999999
Q ss_pred CCCCCCCc-------ccChHHHhcccc------CCCeEEEEcCCHH----H--HHHH----HHHHHCCCc-----EEEEe
Q 042564 180 APIPGQEL-------AITSDEALSLEE------LPKRAVVLGGGYI----A--VEFA----SIWRGMGST-----VDLLF 231 (498)
Q Consensus 180 p~i~g~~~-------~~~~~~~~~l~~------~~~~v~ViG~G~~----g--~e~a----~~l~~~g~~-----V~lv~ 231 (498)
|.+||.+. +.+.++...+.+ ..++++|||+|+. | +|+| ..+++.|.+ |++++
T Consensus 115 ~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~ 194 (437)
T 3sx6_A 115 ENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFIT 194 (437)
T ss_dssp GGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEE
T ss_pred ccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEc
Confidence 99998752 455665544321 1345688888654 3 7777 666777875 99999
Q ss_pred eCCCCC----CCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEE--CC-----CeEEEcCEEEEecCCCcCC
Q 042564 232 RKELPL----RGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT--DH-----GEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 232 ~~~~~l----~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~--~~-----g~~i~~D~vi~a~G~~p~~ 300 (498)
+.+.+. +.+ ++..+.+.+.+++.||++++++.|.++.. +.+.+.. .+ ++++++|.+++++|+.|+.
T Consensus 195 ~~~~~~~~~l~~~-~~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~ 271 (437)
T 3sx6_A 195 SEPYIGHLGIQGV-GDSKGILTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVP 271 (437)
T ss_dssp SSSSTTCTTTTCC-TTHHHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCH
T ss_pred CCccccccccCcc-hHHHHHHHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcCch
Confidence 988763 223 34788899999999999999999999953 4444432 23 5679999999999988876
Q ss_pred CCCCcccCCceeCCCCCeEcCCCCCC-CCCCeEEecccCCC------------CCChHHHHHHHHHHHHHHh
Q 042564 301 KRLNLKAVGVEVDQTGAVKVDENSRT-NVPSIWAVGDVTNR------------MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 301 ~~l~l~~~gi~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~------------~~~~~~A~~~g~~aa~~i~ 359 (498)
.. .+..++ .+++|+|.||+++|| ++|||||+|||+.. ++.+..|..||+++|+||.
T Consensus 272 ~~--~~~~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 272 AV--AGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp HH--HTSTTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred hh--hccccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 53 233566 678899999999999 99999999999873 4578899999999999986
No 73
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=9.2e-33 Score=283.11 Aligned_cols=305 Identities=16% Similarity=0.118 Sum_probs=205.6
Q ss_pred ccEEEECCChhHHHHHHHHHh---CCCc---EEEEccCCCCCCCCcCCCccccccc---cCchhhHHHHHHhHhhHHH-h
Q 042564 24 FDLFVIGAGSGGVRAARFSAN---FGAK---VGICELPFHPISSEVIGGVGGTCVI---RGCVPKKILVYGASFGGEL-E 93 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~---~g~~---V~lvek~~~~~~~~~~~~~GG~~~~---~g~~p~~~l~~~~~~~~~~-~ 93 (498)
+||+|||||+||+++|..|++ .|.+ |+|||+ ...+||+|.+ .||.|....... ..+..+ .
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~---------~~~~GG~w~~~~~~g~~~~g~~~~~-~~y~~l~~ 72 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEK---------QADWGGQWNYTWRTGLDENGEPVHS-SMYRYLWS 72 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECS---------SSSSCGGGSCCSCCSBCTTSSBCCC-CCCTTCBC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEc---------CCCCCCEeecCCCCCccccCCCCcC-ccccchhh
Confidence 699999999999999999999 9999 999994 4568999976 355442110000 000000 0
Q ss_pred hhhcCCcccccccccCHHHHHH---HHHHHHHHHhHHHHHHHHhCCcE--EEEeE-EEEEe--CC--EEEEEeCC---Cc
Q 042564 94 DARSYGWEVHEKIDFDWKKLLQ---KKTDEILRLNGIYKRLLSNAGVK--LYEGE-GKIVG--PN--EVEVTQLD---GT 160 (498)
Q Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~gv~--~~~~~-~~~i~--~~--~~~v~~~~---g~ 160 (498)
+.+..... ...+.+..-.. ........+..++...+++.+++ +..++ +..++ .+ .+.|...+ |+
T Consensus 73 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~ 149 (464)
T 2xve_A 73 NGPKECLE---FADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDT 149 (464)
T ss_dssp SSCGGGTC---BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTE
T ss_pred cCChhhcc---cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCc
Confidence 00000000 00111111000 00000112223334444555665 55443 44443 33 56665533 43
Q ss_pred eEEEEcCeEEEcCC--CCCCCCCCCCCCc----ccChHHHhccc-cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC
Q 042564 161 KLSYSAKHILIATG--SRAQRAPIPGQEL----AITSDEALSLE-ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK 233 (498)
Q Consensus 161 ~~~~~~d~liiAtG--~~p~~p~i~g~~~----~~~~~~~~~l~-~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~ 233 (498)
..++.||+||+||| +.|+.|++||.+. ++++.++.... ..+++|+|||+|.+|+|+|..|.+.|.+|+++++.
T Consensus 150 ~~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~ 229 (464)
T 2xve_A 150 IYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYR 229 (464)
T ss_dssp EEEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred eEEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEEC
Confidence 35789999999999 8999999999753 34455444433 25799999999999999999999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeC
Q 042564 234 ELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVD 313 (498)
Q Consensus 234 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~ 313 (498)
+.+++..- ..||+++ ..|.++. ++ .|++.+|+++++|.||+|||++|+++++. +..++.++
T Consensus 230 ~~~~~~~~------------~~~V~~~--~~V~~i~--~~--~V~~~dG~~i~~D~Vi~atG~~p~~~~l~-~~~gl~~~ 290 (464)
T 2xve_A 230 TAPMGYKW------------PENWDER--PNLVRVD--TE--NAYFADGSSEKVDAIILCTGYIHHFPFLN-DDLRLVTN 290 (464)
T ss_dssp SCCCCCCC------------CTTEEEC--SCEEEEC--SS--EEEETTSCEEECSEEEECCCBCCCCTTBC-TTTCCCCC
T ss_pred CCCCCCCC------------CCceEEc--CCeEEEe--CC--EEEECCCCEEeCCEEEECCCCCCCCCCcC-cccccccC
Confidence 87665311 2478887 6788884 23 47788999999999999999999999854 34678877
Q ss_pred CCCCeEcCCC---CCCCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhCCC
Q 042564 314 QTGAVKVDEN---SRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQ 362 (498)
Q Consensus 314 ~~g~i~vd~~---~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 362 (498)
++|++ ++.+ ++|+.|+|||+||+... ..++.|..||+++|+++.|..
T Consensus 291 ~~~~v-~~~~~~~~~t~~p~i~aiGd~~~~-~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 291 NRLWP-LNLYKGVVWEDNPKFFYIGMQDQW-YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp SSSCC-SSEETTTEESSSTTEEECSCSCCS-SCHHHHHHHHHHHHHHHTTSS
T ss_pred CCccc-ccccceEecCCCCCEEEEeCcccc-cchHHHHHHHHHHHHHHcCCC
Confidence 66555 4433 57899999999999874 578899999999999999753
No 74
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=6.5e-34 Score=289.81 Aligned_cols=276 Identities=25% Similarity=0.360 Sum_probs=199.5
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
..+||+||||||||+++|..|++.|++|+|+|+ ...+||.+.+ .+| .+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~---------~~~~GG~l~~--gip------------------~~--- 168 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDR---------YDRMGGLLVY--GIP------------------GF--- 168 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECS---------SSSCSTHHHH--TSC------------------TT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEec---------cCCCCCeeee--cCC------------------Cc---
Confidence 457999999999999999999999999999994 3456665311 011 00
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCC-CCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR-AQRA 180 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~-p~~p 180 (498)
.+. ..+. ......+++.|++++.++.. . . .+..+++ .+.||+||+|||+. |+.+
T Consensus 169 -----~~~-~~~~-----------~~~~~~l~~~gv~~~~~~~v--~-~--~v~~~~~---~~~~d~vvlAtG~~~~~~~ 223 (456)
T 2vdc_G 169 -----KLE-KSVV-----------ERRVKLLADAGVIYHPNFEV--G-R--DASLPEL---RRKHVAVLVATGVYKARDI 223 (456)
T ss_dssp -----TSC-HHHH-----------HHHHHHHHHTTCEEETTCCB--T-T--TBCHHHH---HSSCSEEEECCCCCEECCT
T ss_pred -----cCC-HHHH-----------HHHHHHHHHCCcEEEeCCEe--c-c--EEEhhHh---HhhCCEEEEecCCCCCCCC
Confidence 000 1111 11234456679998876532 1 1 1212121 35799999999986 7788
Q ss_pred CCCCCCc--ccChHHHhc------------------cccCCCeEEEEcCCHHHHHHHHHHHHCCCc-EEEEeeCCCC-CC
Q 042564 181 PIPGQEL--AITSDEALS------------------LEELPKRAVVLGGGYIAVEFASIWRGMGST-VDLLFRKELP-LR 238 (498)
Q Consensus 181 ~i~g~~~--~~~~~~~~~------------------l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~-V~lv~~~~~~-l~ 238 (498)
++||.+. +++..+++. ....+++|+|||+|.+|+|+|..+.+.|.+ |++++|.+.. ++
T Consensus 224 ~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p 303 (456)
T 2vdc_G 224 KAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMP 303 (456)
T ss_dssp TCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCS
T ss_pred CCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCC
Confidence 8888642 333322211 113468999999999999999999999984 9999998865 55
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe--EEEE---E----C---------CC--eEEEcCEEEEecCCCc
Q 042564 239 GFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG--VKVI---T----D---------HG--EEIVADVVLFATGRAP 298 (498)
Q Consensus 239 ~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~--~~v~---~----~---------~g--~~i~~D~vi~a~G~~p 298 (498)
..+.+ .+.+++.||++++++.+.++..++.. +.+. + . +| .++++|.||+|+|+.|
T Consensus 304 ~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p 378 (456)
T 2vdc_G 304 GSQRE-----VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEP 378 (456)
T ss_dssp SCHHH-----HHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred CCHHH-----HHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCC
Confidence 55443 24567789999999999888753211 1111 1 1 23 3689999999999999
Q ss_pred CCCCCCcccCCceeCCCCCeEcCCC-CCCCCCCeEEecccCCCCCChHHHHHHHHHHHHHHh
Q 042564 299 NTKRLNLKAVGVEVDQTGAVKVDEN-SRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 299 ~~~~l~l~~~gi~~~~~g~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 359 (498)
+...+.++..+++++++|+|.||++ ++|+.|+|||+|||+..+.++..|+.||+.||++|.
T Consensus 379 ~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~ 440 (456)
T 2vdc_G 379 EDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIH 440 (456)
T ss_dssp CCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHH
T ss_pred CcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCchHHHHHHHHHHHHHHHHH
Confidence 8762115778899999999999997 999999999999999988999999999999999985
No 75
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=7.1e-34 Score=316.38 Aligned_cols=277 Identities=23% Similarity=0.301 Sum_probs=203.4
Q ss_pred CccEEEECCChhHHHHHHHHHhCCC-cEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGA-KVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
.+||+||||||||++||..|++.|+ +|+|+|+ ...+||.+. .++| .|+.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~---------~~~~GG~~~--~~ip------------------~~~~- 236 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEK---------QEYVGGLST--SEIP------------------QFRL- 236 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEES---------SSSCSTHHH--HTSC------------------TTTS-
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeC---------CCCCCcccc--ccCC------------------cccC-
Confidence 5799999999999999999999999 7999994 345777642 2222 1111
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCC-CCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGS-RAQRA 180 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~-~p~~p 180 (498)
. .... .+....+++.||+++.++... .+.+ +..++ ..+.||+||||||+ .|+.+
T Consensus 237 -------~-~~~~-----------~~~~~~~~~~gv~~~~~~~v~--~~~v--~~~~~--~~~~~d~vvlAtGa~~p~~l 291 (1025)
T 1gte_A 237 -------P-YDVV-----------NFEIELMKDLGVKIICGKSLS--ENEI--TLNTL--KEEGYKAAFIGIGLPEPKTD 291 (1025)
T ss_dssp -------C-HHHH-----------HHHHHHHHTTTCEEEESCCBS--TTSB--CHHHH--HHTTCCEEEECCCCCEECCC
T ss_pred -------C-HHHH-----------HHHHHHHHHCCcEEEcccEec--cceE--Ehhhc--CccCCCEEEEecCCCCCCCC
Confidence 0 1111 112345567899999876432 1222 22222 24789999999998 58766
Q ss_pred CC-CCC---CcccChHHHhc----------------cccCCCeEEEEcCCHHHHHHHHHHHHCCC-cEEEEeeCC-CCCC
Q 042564 181 PI-PGQ---ELAITSDEALS----------------LEELPKRAVVLGGGYIAVEFASIWRGMGS-TVDLLFRKE-LPLR 238 (498)
Q Consensus 181 ~i-~g~---~~~~~~~~~~~----------------l~~~~~~v~ViG~G~~g~e~a~~l~~~g~-~V~lv~~~~-~~l~ 238 (498)
++ +|. ..+++..+++. +...+++|+|||||++|+|+|..+.++|. +|+++++.+ ..++
T Consensus 292 ~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~ 371 (1025)
T 1gte_A 292 DIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIR 371 (1025)
T ss_dssp GGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCC
T ss_pred CCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCC
Confidence 54 354 33566555543 12346799999999999999999999997 899999987 4556
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeE-EEEEC------CC---------eEEEcCEEEEecCCCcCCCC
Q 042564 239 GFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGV-KVITD------HG---------EEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 239 ~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~v~~~------~g---------~~i~~D~vi~a~G~~p~~~~ 302 (498)
.+++++ +.+++.||++++++.+.++..+++.+ .+++. +| .++++|.||+|+|++|+...
T Consensus 372 ~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~ 446 (1025)
T 1gte_A 372 AVPEEV-----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPK 446 (1025)
T ss_dssp SCHHHH-----HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHH
T ss_pred CCHHHH-----HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchh
Confidence 566554 35677899999999999997655442 23331 22 36899999999999875433
Q ss_pred CCccc-CCceeCCCCCeEcCC-CCCCCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhC
Q 042564 303 LNLKA-VGVEVDQTGAVKVDE-NSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 303 l~l~~-~gi~~~~~g~i~vd~-~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 360 (498)
+ +.+ .|++++++|+|.||+ +++|+.|+|||+|||+..+.++..|+.||+.||++|.+
T Consensus 447 l-~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~ 505 (1025)
T 1gte_A 447 V-KEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHK 505 (1025)
T ss_dssp H-HHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHH
T ss_pred h-hhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 2 333 589999899999997 89999999999999999888999999999999999973
No 76
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=2.3e-32 Score=276.55 Aligned_cols=281 Identities=20% Similarity=0.247 Sum_probs=208.6
Q ss_pred ccEEEECCChhHHHHHHHHHh---CCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 24 FDLFVIGAGSGGVRAARFSAN---FGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~---~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
+||+|||||++|+++|..|++ .|.+|+|||+ .+ .++.. .+.|. ...+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~------~~---~~~~~----~~~~~----------------~~~~~ 52 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINK------SR---FSYFR----PALPH----------------VAIGV 52 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEES------SS---EEEEC----CSSCC----------------CCSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeC------CC---Cceec----cchhh----------------cccCC
Confidence 489999999999999999999 8999999994 21 11111 01110 00000
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCC--ceEEEEcCeEEEcCCCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDG--TKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g--~~~~~~~d~liiAtG~~p~ 178 (498)
... +++...+...+.+.+++++.+++..++.+...|.+.++ +..++.||+||+|||+.|.
T Consensus 53 ~~~------------------~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 53 RDV------------------DELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp CCC------------------CCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred cCH------------------HHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 000 00111123445567999999988888776434444333 3356999999999999999
Q ss_pred CCCCCCCCc----ccChHHHhccc----cCCCeEEEEcCCH-------------------------HHHHHH----HHHH
Q 042564 179 RAPIPGQEL----AITSDEALSLE----ELPKRAVVLGGGY-------------------------IAVEFA----SIWR 221 (498)
Q Consensus 179 ~p~i~g~~~----~~~~~~~~~l~----~~~~~v~ViG~G~-------------------------~g~e~a----~~l~ 221 (498)
.|++||.+. +.+.++...+. ...++++|||+|+ .++|+| ..+.
T Consensus 115 ~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~ 194 (409)
T 3h8l_A 115 TELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFK 194 (409)
T ss_dssp GGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHH
T ss_pred ccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHH
Confidence 998998742 34444443322 2336677999992 466766 5566
Q ss_pred HCCC----cEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCC
Q 042564 222 GMGS----TVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 222 ~~g~----~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
+.|. +|+++++.+ +++.+++++.+.+.+.+++.||++++++.|++++.+ + +++++|+++++|.+|+++|+.
T Consensus 195 ~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 195 KKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp TTTCTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEE
T ss_pred HcCCCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCC
Confidence 7774 899999988 777889999999999999999999999999999543 2 778899999999999999999
Q ss_pred cCCCCCCcccC--CceeCCCCCeEcCCCCCC-CCCCeEEecccCC--CCCChHHHHHHHHHHHHHHhC
Q 042564 298 PNTKRLNLKAV--GVEVDQTGAVKVDENSRT-NVPSIWAVGDVTN--RMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 298 p~~~~l~l~~~--gi~~~~~g~i~vd~~~~t-~~~~iya~GD~~~--~~~~~~~A~~~g~~aa~~i~~ 360 (498)
|+.. +++. ++ .+++|+|.||+++|| +.|||||+|||+. .++++..|..||+++|+||.+
T Consensus 270 ~~~~---l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 270 GNPA---LKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp CCHH---HHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccHH---HHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9853 4555 44 367889999999999 9999999999996 377889999999999999864
No 77
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=2.1e-33 Score=283.48 Aligned_cols=282 Identities=19% Similarity=0.239 Sum_probs=205.1
Q ss_pred ccEEEECCChhHHHHHHHHHhCC--CcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFG--AKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g--~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
++|||||||+||+++|.+|++.+ .+|+|||+ ......| |.++.++ .+. ..
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~----------~~~~~~~----p~~~~v~-~g~-------------~~ 54 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP----------NETYYTC----YMSNEVI-GGD-------------RE 54 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS----------CSSEECS----TTHHHHH-HTS-------------SC
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC----------CCCCCCc----cCHHHHh-cCC-------------CC
Confidence 57999999999999999998854 69999993 2211222 1111110 000 00
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
.. ....++ +.+.+.+++++.+++..+|+....+.+.+|. ++.||+||+|||+++..++
T Consensus 55 ~~-~~~~~~-------------------~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~--~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 55 LA-SLRVGY-------------------DGLRAHGIQVVHDSALGIDPDKKLVKTAGGA--EFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp GG-GGEECS-------------------HHHHHTTCEEECSCEEEEETTTTEEEETTSC--EEECSEEEECCCEEECGGG
T ss_pred HH-HHhhCH-------------------HHHHHCCCEEEEeEEEEEEccCcEEEecccc--eeecceeeeccCCccccCC
Confidence 00 000111 1123468999999999999988888888876 8999999999999999999
Q ss_pred CCCCCc---------ccChHHHhcc----ccC-CCeEEEEcCCH-----------HHHHHHHHHHHCC--CcEEEEeeCC
Q 042564 182 IPGQEL---------AITSDEALSL----EEL-PKRAVVLGGGY-----------IAVEFASIWRGMG--STVDLLFRKE 234 (498)
Q Consensus 182 i~g~~~---------~~~~~~~~~l----~~~-~~~v~ViG~G~-----------~g~e~a~~l~~~g--~~V~lv~~~~ 234 (498)
+||.+. ..+.++...+ ... ....+|+++|. .+.+++..+++.+ .+|+++++.+
T Consensus 113 i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~ 192 (401)
T 3vrd_B 113 IEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQ 192 (401)
T ss_dssp SBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred ccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccc
Confidence 988642 1233333322 111 23334443321 4567777777655 6899998887
Q ss_pred CCCC--CCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCcee
Q 042564 235 LPLR--GFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEV 312 (498)
Q Consensus 235 ~~l~--~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~ 312 (498)
.+.. .+++.+.+.+.+.+++.||++++++.+..++.+.+...+.+++|+++++|.+++++|.+|+. + ++++++ .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~-~--~~~~gl-~ 268 (401)
T 3vrd_B 193 TFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGK-I--AQSASL-T 268 (401)
T ss_dssp SCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECH-H--HHHTTC-C
T ss_pred cccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCch-h--Hhhccc-c
Confidence 6543 25667777777778899999999999999988877778999999999999999999999984 3 577788 4
Q ss_pred CCCCCeEcCCC-CC-CCCCCeEEecccCCC---CCChHHHHHHHHHHHHHHh
Q 042564 313 DQTGAVKVDEN-SR-TNVPSIWAVGDVTNR---MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 313 ~~~g~i~vd~~-~~-t~~~~iya~GD~~~~---~~~~~~A~~~g~~aa~~i~ 359 (498)
+++|+|.||++ +| |++|||||+|||+.. +++++.|.+||+++|+||.
T Consensus 269 ~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~ 320 (401)
T 3vrd_B 269 NDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVV 320 (401)
T ss_dssp CTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHH
Confidence 77899999986 65 799999999999864 5788999999999999985
No 78
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=2.9e-31 Score=271.32 Aligned_cols=298 Identities=14% Similarity=0.061 Sum_probs=198.6
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCC--cEEEEccCCCCCCCCcCCCccccccccCchh------hHHH-------HH--
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGA--KVGICELPFHPISSEVIGGVGGTCVIRGCVP------KKIL-------VY-- 84 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~--~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p------~~~l-------~~-- 84 (498)
..+||+|||||++|+++|..|++.|. +|+|+|+ ...+||.|.+.+|.+ .... ..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~---------~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~ 75 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFER---------RGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPA 75 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECS---------SSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEec---------CCCCCCeecCCCCCCccccccccccccccccccccc
Confidence 35899999999999999999999999 9999995 446788888776522 1000 00
Q ss_pred -----HhHhh--------HHHhhhhcCCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEE--e
Q 042564 85 -----GASFG--------GELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIV--G 148 (498)
Q Consensus 85 -----~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i--~ 148 (498)
.+..+ .....+..+.+............+. .++.....+.+..+..++ +..+ +
T Consensus 76 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~l~~~~~~~~~~i~~~t~V~~v~~~ 144 (447)
T 2gv8_A 76 ALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQ-----------EYQRIYAQPLLPFIKLATDVLDIEKK 144 (447)
T ss_dssp SCCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHH-----------HHHHHHHGGGGGGEECSEEEEEEEEE
T ss_pred ccCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHH-----------HHHHHHHHHhhCeEEeCCEEEEEEeC
Confidence 00000 0000011111110000111122222 223333333344454443 4444 3
Q ss_pred CCEEEEEeCC---Cc-eEEEEcCeEEEcCCC--CCCCCCCCCCCc--------ccChHHHhcccc-CCCeEEEEcCCHHH
Q 042564 149 PNEVEVTQLD---GT-KLSYSAKHILIATGS--RAQRAPIPGQEL--------AITSDEALSLEE-LPKRAVVLGGGYIA 213 (498)
Q Consensus 149 ~~~~~v~~~~---g~-~~~~~~d~liiAtG~--~p~~p~i~g~~~--------~~~~~~~~~l~~-~~~~v~ViG~G~~g 213 (498)
.+.+.|+..+ |+ ..++.||+||+|||. .|+.|++||.+. ++++.++..... .+++|+|||+|.+|
T Consensus 145 ~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg 224 (447)
T 2gv8_A 145 DGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSA 224 (447)
T ss_dssp TTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHH
T ss_pred CCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCH
Confidence 4556666543 53 347899999999997 889999998642 344444443332 57899999999999
Q ss_pred HHHHHHHHHCCCc-EEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeE-EEcCEEE
Q 042564 214 VEFASIWRGMGST-VDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEE-IVADVVL 291 (498)
Q Consensus 214 ~e~a~~l~~~g~~-V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~-i~~D~vi 291 (498)
+|+|..|.+.+.+ |++++|.+.+ ++..||.+ +..|.++..++. .|++.+|+. +++|.||
T Consensus 225 ~e~A~~l~~~~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi 285 (447)
T 2gv8_A 225 NDLVRHLTPVAKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDPTTR--EIYLKGGKVLSNIDRVI 285 (447)
T ss_dssp HHHHHHHTTTSCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEETTTT--EEEETTTEEECCCSEEE
T ss_pred HHHHHHHHHHhCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEecCCC--EEEECCCCEeccCCEEE
Confidence 9999999999999 9999998754 34557764 467888854333 577889986 7899999
Q ss_pred EecCCCcCCCC-----CCcccCCceeCCCCCeEcCCCCC---CCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhCC
Q 042564 292 FATGRAPNTKR-----LNLKAVGVEVDQTGAVKVDENSR---TNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGG 361 (498)
Q Consensus 292 ~a~G~~p~~~~-----l~l~~~gi~~~~~g~i~vd~~~~---t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 361 (498)
+|+|++|++++ +.-...++.. ++.+.++.+.+ ++.|+||++||+... .+++.|..||+++|+++.|.
T Consensus 286 ~atG~~~~~~~l~~~~l~~~~~~i~~--~~~~~~~~~~~v~~~~~p~l~~~G~~~~~-~~~~~a~~qa~~~a~~~~g~ 360 (447)
T 2gv8_A 286 YCTGYLYSVPFPSLAKLKSPETKLID--DGSHVHNVYQHIFYIPDPTLAFVGLALHV-VPFPTSQAQAAFLARVWSGR 360 (447)
T ss_dssp ECCCBCCCCCCHHHHSCCSTTTCCCS--SSSSCCSEETTTEETTCTTEEESSCCBSS-CHHHHHHHHHHHHHHHHTTS
T ss_pred ECCCCCcCCCCCcccccccccCceec--CCCcccccccccccCCCCcEEEEeccccc-cCchHHHHHHHHHHHHHcCC
Confidence 99999999988 5311123333 34566666655 699999999999875 47889999999999999975
No 79
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.97 E-value=6.3e-32 Score=274.62 Aligned_cols=281 Identities=20% Similarity=0.215 Sum_probs=195.7
Q ss_pred ccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
++|||||||+||+++|.+|++. +.+|+|||+ .+... +.|.-..+... . ..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~------~~~~~----------~~p~l~~v~~g-~-----------~~ 54 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD------RPYFG----------FTPAFPHLAMG-W-----------RK 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS------SSEEE----------CGGGHHHHHHT-C-----------SC
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC------CCCCc----------cCccHHHHhcC-C-----------CC
Confidence 4799999999999999999984 479999994 21110 11211100000 0 00
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
. ..... .+..++++.+++++.+++..+|++..+|.+++|+ +++||+||||||+++. ++
T Consensus 55 ~-~~i~~------------------~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~--~i~YD~LViAtG~~~~-~~ 112 (430)
T 3hyw_A 55 F-EDISV------------------PLAPLLPKFNIEFINEKAESIDPDANTVTTQSGK--KIEYDYLVIATGPKLV-FG 112 (430)
T ss_dssp G-GGSEE------------------ESTTTGGGGTEEEECSCEEEEETTTTEEEETTCC--EEECSEEEECCCCEEE-CC
T ss_pred H-HHhhh------------------cHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCC--EEECCEEEEeCCCCcc-CC
Confidence 0 00000 1123455679999999999999988888888876 8999999999999864 46
Q ss_pred CCCCC----cccChHHHhcccc------CCCeEEEEcCCH------HHHHH----HHHHHHCC----CcEEEEeeCCCCC
Q 042564 182 IPGQE----LAITSDEALSLEE------LPKRAVVLGGGY------IAVEF----ASIWRGMG----STVDLLFRKELPL 237 (498)
Q Consensus 182 i~g~~----~~~~~~~~~~l~~------~~~~v~ViG~G~------~g~e~----a~~l~~~g----~~V~lv~~~~~~l 237 (498)
+||.+ .+.+.+++.++.+ ..+.++|+|++. .+.|+ +..+.+.+ .+|++++..+.+.
T Consensus 113 i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~ 192 (430)
T 3hyw_A 113 AEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLG 192 (430)
T ss_dssp SBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTT
T ss_pred ccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhh
Confidence 78863 2455565544321 123455555542 23343 34455554 4788888766542
Q ss_pred C---CCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCC--eEEEcCEEEEecCCCcCCCCCCcccC--Cc
Q 042564 238 R---GFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHG--EEIVADVVLFATGRAPNTKRLNLKAV--GV 310 (498)
Q Consensus 238 ~---~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~~l~l~~~--gi 310 (498)
+ ...+...+.+.+.++++||++++++.|++++ ++.+.+...+| +++++|.+++++|.+|+.. +..+ .+
T Consensus 193 ~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~---~~~~~~~l 267 (430)
T 3hyw_A 193 HFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEV---VASAGDKV 267 (430)
T ss_dssp CTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEECCHH---HHTTCTTT
T ss_pred hccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccCCCchH---HHhccccc
Confidence 2 3556778889999999999999999999984 45555555444 4799999999999999853 2333 34
Q ss_pred eeCCCCCeEcCCCCC-CCCCCeEEecccCCC------------CCChHHHHHHHHHHHHHHh
Q 042564 311 EVDQTGAVKVDENSR-TNVPSIWAVGDVTNR------------MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 311 ~~~~~g~i~vd~~~~-t~~~~iya~GD~~~~------------~~~~~~A~~~g~~aa~~i~ 359 (498)
..+.+|+|.||++|| |++|||||+|||+.. ++.+..|.+||+++|+||.
T Consensus 268 ~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 268 ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHH
Confidence 445667899999999 899999999999863 4667899999999999986
No 80
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.97 E-value=4.1e-32 Score=276.27 Aligned_cols=280 Identities=19% Similarity=0.198 Sum_probs=199.4
Q ss_pred ccEEEECCChhHHHHHHHHHh--CCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 24 FDLFVIGAGSGGVRAARFSAN--FGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~--~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
+||+|||||+||+++|..|++ .|.+|+|||+ . ..+++. |....... +..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~------~---~~~~~~-------~~~~~~~~-------------g~~ 53 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD------R---PYFGFT-------PAFPHLAM-------------GWR 53 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS------S---SEEECG-------GGHHHHHH-------------TCS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECC------C---CCCCcC-------CCcchhcc-------------Ccc
Confidence 699999999999999999999 8899999994 2 122211 11100000 000
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
.. +.+...+...+++.+++++.+++..++++...|.+.+++ ++.||+||+|||+.|..|.
T Consensus 54 ~~------------------~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~--~i~~d~liiAtG~~~~~pg 113 (430)
T 3h28_A 54 KF------------------EDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGK--KIEYDYLVIATGPKLVFGA 113 (430)
T ss_dssp CG------------------GGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCC--EEECSEEEECCCCEEECCS
T ss_pred CH------------------HHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCc--EEECCEEEEcCCcccccCC
Confidence 00 000111122345579999998888998876677777765 7999999999999987764
Q ss_pred CC--CC-CcccChHHHhcccc------CCCeEEEEcCCHHH------HHHH----HHHHHCC----CcEEEEeeCCCCC-
Q 042564 182 IP--GQ-ELAITSDEALSLEE------LPKRAVVLGGGYIA------VEFA----SIWRGMG----STVDLLFRKELPL- 237 (498)
Q Consensus 182 i~--g~-~~~~~~~~~~~l~~------~~~~v~ViG~G~~g------~e~a----~~l~~~g----~~V~lv~~~~~~l- 237 (498)
+. +. ..+.+.++...+.+ ..++++|||+|+.+ +|+| ..+++.| .+|+++++.+.+.
T Consensus 114 ~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~ 193 (430)
T 3h28_A 114 EGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGH 193 (430)
T ss_dssp BTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTC
T ss_pred CCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccc
Confidence 32 11 12455565544322 13456788887543 7777 5556677 5899999887652
Q ss_pred ---CCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEE--CCCeEEEcCEEEEecCCCcCCCCCCccc--CCc
Q 042564 238 ---RGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT--DHGEEIVADVVLFATGRAPNTKRLNLKA--VGV 310 (498)
Q Consensus 238 ---~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~--~~g~~i~~D~vi~a~G~~p~~~~l~l~~--~gi 310 (498)
+.+ ++..+.+.+.+++.||++++++.|.+|+. +.+.+.. .+++++++|.+++++|++|+.. +.+ .++
T Consensus 194 ~~l~~~-~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~---l~~~~~gl 267 (430)
T 3h28_A 194 FGVGGI-GASKRLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSFQGPEV---VASAGDKV 267 (430)
T ss_dssp TTTTCS-TTHHHHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEEECCHH---HHTTCTTT
T ss_pred cccCcc-hHHHHHHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCCccchh---HhhccccC
Confidence 222 34788889999999999999999999953 3433332 1267899999999999998764 233 467
Q ss_pred eeCCCC-CeEcCCCCCC-CCCCeEEecccCCC------------CCChHHHHHHHHHHHHHHh
Q 042564 311 EVDQTG-AVKVDENSRT-NVPSIWAVGDVTNR------------MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 311 ~~~~~g-~i~vd~~~~t-~~~~iya~GD~~~~------------~~~~~~A~~~g~~aa~~i~ 359 (498)
.+++| +|.||+++|| ++|||||+|||+.. +++++.|..||+++|+||.
T Consensus 268 -~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~ 329 (430)
T 3h28_A 268 -ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp -BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred -cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 67889 9999999998 99999999999874 4678999999999999986
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=4.7e-32 Score=276.53 Aligned_cols=276 Identities=18% Similarity=0.244 Sum_probs=199.2
Q ss_pred CccEEEECCChhHHHHHHHHHh-C------CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhh
Q 042564 23 DFDLFVIGAGSGGVRAARFSAN-F------GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDA 95 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~-~------g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~ 95 (498)
.+||+||||||||+++|..|++ . |.+|+|||+ ...+||.| ..||.|.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~---------~~~~gg~~-~~gv~p~~~-------------- 58 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEM---------LPTPWGLV-RSGVAPDHP-------------- 58 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEES---------SSSCSTHH-HHTSCTTCT--------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEec---------CCCCCCcc-ccccCCCCC--------------
Confidence 4799999999999999999999 7 999999994 23467777 345655210
Q ss_pred hcCCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCC
Q 042564 96 RSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGS 175 (498)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~ 175 (498)
.. ..+...+...+.+.+++++.+.. ++ .. |...++ .+.||+||+|||+
T Consensus 59 -------------~~-----------~~~~~~~~~~~~~~~v~~~~~v~--v~-~~--v~~~~~---~~~~d~lViAtG~ 106 (456)
T 1lqt_A 59 -------------KI-----------KSISKQFEKTAEDPRFRFFGNVV--VG-EH--VQPGEL---SERYDAVIYAVGA 106 (456)
T ss_dssp -------------GG-----------GGGHHHHHHHHTSTTEEEEESCC--BT-TT--BCHHHH---HHHSSEEEECCCC
T ss_pred -------------CH-----------HHHHHHHHHHHhcCCCEEEeeEE--EC-CE--EEECCC---eEeCCEEEEeeCC
Confidence 00 01122234455667899887632 22 11 222232 4789999999999
Q ss_pred C-CCCCCCCCCC--cccChHHHh-----------cccc-CCCeEEEEcCCHHHHHHHHHHHHC-----------------
Q 042564 176 R-AQRAPIPGQE--LAITSDEAL-----------SLEE-LPKRAVVLGGGYIAVEFASIWRGM----------------- 223 (498)
Q Consensus 176 ~-p~~p~i~g~~--~~~~~~~~~-----------~l~~-~~~~v~ViG~G~~g~e~a~~l~~~----------------- 223 (498)
. |+.|++||.+ .+++..++. .+.. .+++|+|||+|++|+|+|..|.+.
T Consensus 107 ~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l 186 (456)
T 1lqt_A 107 QSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESL 186 (456)
T ss_dssp CEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHH
Confidence 7 7888899875 245555542 2222 368999999999999999999874
Q ss_pred ---CC-cEEEEeeCCCCCCCCCH-------------------HH------------------HHHHHHHHHh------CC
Q 042564 224 ---GS-TVDLLFRKELPLRGFDD-------------------EM------------------RAVVARNLEG------RG 256 (498)
Q Consensus 224 ---g~-~V~lv~~~~~~l~~~~~-------------------~~------------------~~~l~~~l~~------~G 256 (498)
+. +|+++.|.+.+...|.+ ++ .+.+.+.+++ +|
T Consensus 187 ~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g 266 (456)
T 1lqt_A 187 RPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRR 266 (456)
T ss_dssp TTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEE
T ss_pred HHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCce
Confidence 54 89999998765443321 11 3445555555 79
Q ss_pred CEEEcCccEEEEEEeCCeEEEEEC----------------CC--eEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCe
Q 042564 257 INLHPRTTIKELIKSEEGVKVITD----------------HG--EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAV 318 (498)
Q Consensus 257 v~i~~~~~v~~i~~~~~~~~v~~~----------------~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i 318 (498)
|++++++.+.+|..++....+.+. +| ++++||.||+|+|++|+. + .++.++++|+|
T Consensus 267 v~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l-----~gl~~d~~g~i 340 (456)
T 1lqt_A 267 MVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T-----PGLPFDDQSGT 340 (456)
T ss_dssp EEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C-----TTSCCBTTTTB
T ss_pred EEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C-----CCCcccCCCCe
Confidence 999999999999765332123322 34 468999999999999998 2 36778888899
Q ss_pred EcCCCCC-CCCCCeEEecccCCCCC-ChHHHHHHHHHHHHHHhC
Q 042564 319 KVDENSR-TNVPSIWAVGDVTNRMN-LTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 319 ~vd~~~~-t~~~~iya~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 360 (498)
.+|+++| |+.|+|||+|||+..+. .+..|..+|..+|.+|++
T Consensus 341 ~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 341 IPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp CCEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHH
T ss_pred eECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHH
Confidence 9999999 89999999999986554 566899999999999864
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=3e-30 Score=265.36 Aligned_cols=313 Identities=16% Similarity=0.190 Sum_probs=196.7
Q ss_pred CCccEEEECCChhHHHHHHHHHhCC-----CcEEEEccCCCCCCCCcCCCccccccccCc-hhhHHHHHHhHhhHHHhhh
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFG-----AKVGICELPFHPISSEVIGGVGGTCVIRGC-VPKKILVYGASFGGELEDA 95 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g-----~~V~lvek~~~~~~~~~~~~~GG~~~~~g~-~p~~~l~~~~~~~~~~~~~ 95 (498)
..|||+|||||++|+++|..|++.| .+|+|||+ .+..+...|.+. .+| +... + +.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~------~~~~g~~~~~~~-~~~~~~~~-------~---~~-- 89 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDK------QGDYRWHGNTLV-SQSELQIS-------F---LK-- 89 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEES------CSSCCSSGGGCC-SSCBCSSC-------T---TS--
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEec------CCCCCCcCCCCC-CCCcCCcc-------h---hh--
Confidence 4589999999999999999999999 99999995 221111111111 011 0000 0 00
Q ss_pred hcCCcccccccccCHHHHHHHHH------------HHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC----CE---EEEE
Q 042564 96 RSYGWEVHEKIDFDWKKLLQKKT------------DEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP----NE---VEVT 155 (498)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~----~~---~~v~ 155 (498)
.+.........+.+..++.... .....+..++.....+.++++..++ +..++. .. +.|.
T Consensus 90 -~l~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~ 168 (463)
T 3s5w_A 90 -DLVSLRNPTSPYSFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVI 168 (463)
T ss_dssp -SSSTTTCTTCTTSHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEE
T ss_pred -ccccccCCCCCCChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEE
Confidence 0000000000111111111000 0012333445555566678888876 555543 22 3555
Q ss_pred eCC--CceEEEEcCeEEEcCCCCCCCCC-CCCCC---cccChHHHhc-ccc------CCCeEEEEcCCHHHHHHHHHHHH
Q 042564 156 QLD--GTKLSYSAKHILIATGSRAQRAP-IPGQE---LAITSDEALS-LEE------LPKRAVVLGGGYIAVEFASIWRG 222 (498)
Q Consensus 156 ~~~--g~~~~~~~d~liiAtG~~p~~p~-i~g~~---~~~~~~~~~~-l~~------~~~~v~ViG~G~~g~e~a~~l~~ 222 (498)
+.+ |+..++.||+||+|||+.|.+|+ +++.. .+++..++.. +.. .+++|+|||+|.+|+|+|..|.+
T Consensus 169 ~~~g~g~~~~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~ 248 (463)
T 3s5w_A 169 SRNADGEELVRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLND 248 (463)
T ss_dssp EEETTSCEEEEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHH
T ss_pred EecCCCceEEEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHh
Confidence 443 33347999999999999998886 33321 2333333222 222 46899999999999999999999
Q ss_pred C--CCcEEEEeeCCCCCCCC--------------------CHHHHHHHHHHHHh--------------------------
Q 042564 223 M--GSTVDLLFRKELPLRGF--------------------DDEMRAVVARNLEG-------------------------- 254 (498)
Q Consensus 223 ~--g~~V~lv~~~~~~l~~~--------------------~~~~~~~l~~~l~~-------------------------- 254 (498)
. +.+|+++.|.+.+++.. +++....+.+.+..
T Consensus 249 ~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 328 (463)
T 3s5w_A 249 SYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGI 328 (463)
T ss_dssp HCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCC
Confidence 8 89999999998775521 22222223332222
Q ss_pred CCCEEEcCccEEEEEEeCCeEEEEEC---CCe--EEEcCEEEEecCCCcC--CCCCCcccCCceeCCCCCeEcCCCCCCC
Q 042564 255 RGINLHPRTTIKELIKSEEGVKVITD---HGE--EIVADVVLFATGRAPN--TKRLNLKAVGVEVDQTGAVKVDENSRTN 327 (498)
Q Consensus 255 ~Gv~i~~~~~v~~i~~~~~~~~v~~~---~g~--~i~~D~vi~a~G~~p~--~~~l~l~~~gi~~~~~g~i~vd~~~~t~ 327 (498)
.||++++++.|+++..+++++.+++. +|+ ++++|.||+|+|++|+ .++ +......+ |++.||+++++.
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~--l~~l~~~~---g~i~v~~~~~~~ 403 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQL--LEPLAEYL---GDHEIGRDYRLQ 403 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTT--TGGGGGGB---C--CCCTTSBCC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccch--hHHHHHHh---CCcccCcccccc
Confidence 59999999999999988887777775 665 4899999999999999 454 34433332 789999999874
Q ss_pred -----CCCeEEecccCCC-----CCChHHHHHHHHHHHHHHh
Q 042564 328 -----VPSIWAVGDVTNR-----MNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 328 -----~~~iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~ 359 (498)
.|+|||+|||... +.+...|.+++++++..+-
T Consensus 404 ~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 404 TDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp BCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred cCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 5679999999752 5677789999998877653
No 83
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=9.7e-31 Score=289.25 Aligned_cols=279 Identities=17% Similarity=0.191 Sum_probs=200.7
Q ss_pred ccCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhc
Q 042564 18 EQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARS 97 (498)
Q Consensus 18 ~~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~ 97 (498)
..+...|||+||||||||++||..|++.|++|+|||+ ...+||+|.+ | |+.
T Consensus 123 ~~~~~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~---------~~~~GG~~~~--~-~k~----------------- 173 (965)
T 2gag_A 123 DHVHVHTDVLVVGAGPAGLAAAREASRSGARVMLLDE---------RAEAGGTLLD--T-AGE----------------- 173 (965)
T ss_dssp EEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSSGGGGG--S-SCC-----------------
T ss_pred cccccCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeC---------CCCCCceecc--C-Ccc-----------------
Confidence 3344568999999999999999999999999999994 3467899873 3 210
Q ss_pred CCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHh-CCcEEEEeE-EEEEeCCEE-E-EE---------eC----CCc
Q 042564 98 YGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSN-AGVKLYEGE-GKIVGPNEV-E-VT---------QL----DGT 160 (498)
Q Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~-~~~i~~~~~-~-v~---------~~----~g~ 160 (498)
.+..... .++. ..+...+.+ .+++++.++ +..++.... . +. .. ++.
T Consensus 174 ---~i~~~~~---~~~~-----------~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~ 236 (965)
T 2gag_A 174 ---QIDGMDS---SAWI-----------EQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRER 236 (965)
T ss_dssp ---EETTEEH---HHHH-----------HHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEE
T ss_pred ---ccCCCCH---HHHH-----------HHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCc
Confidence 0000011 1111 111122333 488888775 444544321 1 11 00 122
Q ss_pred eEEEEcCeEEEcCCCCCCCCCCCCCCc--ccChHHH---hc-cccC-CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC
Q 042564 161 KLSYSAKHILIATGSRAQRAPIPGQEL--AITSDEA---LS-LEEL-PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK 233 (498)
Q Consensus 161 ~~~~~~d~liiAtG~~p~~p~i~g~~~--~~~~~~~---~~-l~~~-~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~ 233 (498)
...+.||+||||||+.|+.|++||.+. +++..++ .. .... .++++|||+|++|+|+|..|.+.|.+|+++++.
T Consensus 237 ~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~ 316 (965)
T 2gag_A 237 IWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDAR 316 (965)
T ss_dssp EEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESC
T ss_pred eEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 247899999999999999999998753 4554333 22 2223 389999999999999999999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEe-CCe-EEEEECC-------C--eEEEcCEEEEecCCCcCCCC
Q 042564 234 ELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKS-EEG-VKVITDH-------G--EEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 234 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~-~~v~~~~-------g--~~i~~D~vi~a~G~~p~~~~ 302 (498)
+.+++ . .+.+++.||++++++.+.++..+ ++. ..|++.+ | +++++|.|++++|++||+++
T Consensus 317 ~~~~~----~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l 387 (965)
T 2gag_A 317 SSISA----A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHL 387 (965)
T ss_dssp SSCCH----H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHH
T ss_pred Cccch----h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHH
Confidence 87542 2 46678899999999999999873 332 3454443 4 57999999999999999986
Q ss_pred CCcccCCceeCCCCCeEcCCCCC-----CCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhC
Q 042564 303 LNLKAVGVEVDQTGAVKVDENSR-----TNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 303 l~l~~~gi~~~~~g~i~vd~~~~-----t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 360 (498)
+ +. ..|.|.+|++++ |++|+|||+|||++.+.+. .|..||+++|.+|.+
T Consensus 388 ~--~~------~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~-~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 388 H--SQ------RQGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTA-SALSTGAATGAAAAT 441 (965)
T ss_dssp H--HH------TTCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHH-HHHHHHHHHHHHHHH
T ss_pred H--Hh------CCCcEEEcCcccccccCCCCCCEEEEEecCCchhHH-HHHHHHHHHHHHHHH
Confidence 3 22 246789998887 8999999999999877665 899999999999864
No 84
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=2.6e-31 Score=271.28 Aligned_cols=276 Identities=20% Similarity=0.241 Sum_probs=197.1
Q ss_pred CccEEEECCChhHHHHHHHHHhCC--CcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFG--AKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
.+||+||||||||+++|..|++.| .+|+|||+ ...+||. .+.+|.|.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~---------~~~~gg~-~~~g~~p~~~------------------- 56 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEK---------QLVPFGL-VRFGVAPDHP------------------- 56 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECS---------SSSSCTH-HHHTSCTTCG-------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeC---------CCcCCce-eecccCCCCc-------------------
Confidence 479999999999999999999988 99999994 2234443 4455555210
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCC-CC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRA-QR 179 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p-~~ 179 (498)
.. ..+...+...+++.+++++.+... . .. |...+ ..+.||+||+|||+.| +.
T Consensus 57 --------~~-----------~~~~~~~~~~~~~~gv~~~~~~~v--~-~~--V~~~~---~~~~~d~lVlAtGs~~~~~ 109 (460)
T 1cjc_A 57 --------EV-----------KNVINTFTQTARSDRCAFYGNVEV--G-RD--VTVQE---LQDAYHAVVLSYGAEDHQA 109 (460)
T ss_dssp --------GG-----------GGHHHHHHHHHTSTTEEEEBSCCB--T-TT--BCHHH---HHHHSSEEEECCCCCEECC
T ss_pred --------cH-----------HHHHHHHHHHHHhCCcEEEeeeEE--e-eE--EEecc---ceEEcCEEEEecCcCCCCC
Confidence 00 011222345566778988876422 1 11 22222 1468999999999995 78
Q ss_pred CCCCCCC--cccChHHHhc----------cc-c-CCCeEEEEcCCHHHHHHHHHHH--------------------HCCC
Q 042564 180 APIPGQE--LAITSDEALS----------LE-E-LPKRAVVLGGGYIAVEFASIWR--------------------GMGS 225 (498)
Q Consensus 180 p~i~g~~--~~~~~~~~~~----------l~-~-~~~~v~ViG~G~~g~e~a~~l~--------------------~~g~ 225 (498)
|++||.+ .+++..++.. +. . .+++++|||+|++|+|+|..|. +.+.
T Consensus 110 ~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~ 189 (460)
T 1cjc_A 110 LDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRV 189 (460)
T ss_dssp CCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCC
T ss_pred CCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCC
Confidence 8899874 3555555421 11 2 3689999999999999999998 5677
Q ss_pred -cEEEEeeCCCC--------------CCC-------------------CCHH---HHHHHHHHHHh--------------
Q 042564 226 -TVDLLFRKELP--------------LRG-------------------FDDE---MRAVVARNLEG-------------- 254 (498)
Q Consensus 226 -~V~lv~~~~~~--------------l~~-------------------~~~~---~~~~l~~~l~~-------------- 254 (498)
+|+++.|.+.+ ++. +++. +.+.+.+.+++
T Consensus 190 ~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 269 (460)
T 1cjc_A 190 KTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASAS 269 (460)
T ss_dssp CEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCS
T ss_pred cEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCC
Confidence 79999998754 221 0110 33444455555
Q ss_pred CCCEEEcCccEEEEEEeC-C-e-EEEEEC---------------CC--eEEEcCEEEEecCCCcCCCCCCcccCCc-eeC
Q 042564 255 RGINLHPRTTIKELIKSE-E-G-VKVITD---------------HG--EEIVADVVLFATGRAPNTKRLNLKAVGV-EVD 313 (498)
Q Consensus 255 ~Gv~i~~~~~v~~i~~~~-~-~-~~v~~~---------------~g--~~i~~D~vi~a~G~~p~~~~l~l~~~gi-~~~ 313 (498)
.||++++++.+.+|..++ + . ..|.+. +| ++++||.||+|+|++|+. + .|+ +++
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l-----~gl~~~d 343 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I-----DPSVPFD 343 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C-----CTTSCCB
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C-----CCCcccc
Confidence 899999999999998763 2 2 223322 34 479999999999999997 2 467 788
Q ss_pred CCCCeEcCCCCCCC-CCCeEEecccCCCCC-ChHHHHHHHHHHHHHHhC
Q 042564 314 QTGAVKVDENSRTN-VPSIWAVGDVTNRMN-LTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 314 ~~g~i~vd~~~~t~-~~~iya~GD~~~~~~-~~~~A~~~g~~aa~~i~~ 360 (498)
++|+|.||+++||+ +|+|||+|||+..+. .+..|..+|+.+|.+|++
T Consensus 344 ~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 344 PKLGVVPNMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp TTTTBCCEETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeECCCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHH
Confidence 88899999999998 799999999997554 567899999999999864
No 85
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=1.5e-31 Score=288.21 Aligned_cols=274 Identities=20% Similarity=0.295 Sum_probs=198.2
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
...+||+||||||||++||..|++.|++|+|||+ ...+||+|.+..++|.+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~---------~~~~GG~~~~~~~~pg~-------------------- 437 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDT---------AEKIGGHLNQVAALPGL-------------------- 437 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS---------SSSTTTTHHHHTTSTTC--------------------
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeC---------CCCcCCeeeecccCCCh--------------------
Confidence 3458999999999999999999999999999994 34578888766655521
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCC----
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR---- 176 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~---- 176 (498)
.+|..+..+....++.+. .....++++..+ . .+...++ ..+.||+||+|||+.
T Consensus 438 -------~~~~~~~~~~~~~i~~~~-----~~~~~~v~i~~~-------~--~v~~~~~--~~~~~d~vviAtG~~~~~~ 494 (729)
T 1o94_A 438 -------GEWSYHRDYRETQITKLL-----KKNKESQLALGQ-------K--PMTADDV--LQYGADKVIIATGARWNTD 494 (729)
T ss_dssp -------GGGHHHHHHHHHHHHHHH-----HHSTTCEEECSC-------C--CCCHHHH--HTSCCSEEEECCCEEECSS
T ss_pred -------HHHHHHHHHHHHHHHHhh-----cccCCceEEEeC-------e--EEehhhc--cccCCCEEEEcCCCCcccc
Confidence 122333333322222210 011124444322 1 2222222 257899999999998
Q ss_pred ----CCCCCCCCCC----cccChHHHhcccc-CCCeEEEEc--CCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC--CCHH
Q 042564 177 ----AQRAPIPGQE----LAITSDEALSLEE-LPKRAVVLG--GGYIAVEFASIWRGMGSTVDLLFRKELPLRG--FDDE 243 (498)
Q Consensus 177 ----p~~p~i~g~~----~~~~~~~~~~l~~-~~~~v~ViG--~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~--~~~~ 243 (498)
|..|++||.+ .+++..+++.... ..++|+||| +|.+|+|+|..|.+.|.+|+++++.+ +++. ++..
T Consensus 495 ~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~ 573 (729)
T 1o94_A 495 GTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE 573 (729)
T ss_dssp CCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC
T ss_pred cccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc
Confidence 5677888876 4678877766433 357999999 99999999999999999999999988 5442 2222
Q ss_pred HHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEE--CCC-eE------------------EEcCEEEEecCCCcCCCC
Q 042564 244 MRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT--DHG-EE------------------IVADVVLFATGRAPNTKR 302 (498)
Q Consensus 244 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~--~~g-~~------------------i~~D~vi~a~G~~p~~~~ 302 (498)
...+.+.+++.||++++++.+.+|.. +++.+.. .++ +. +++|.||+|+|++|+.++
T Consensus 574 -~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l 650 (729)
T 1o94_A 574 -YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTL 650 (729)
T ss_dssp -HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHH
T ss_pred -HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHH
Confidence 45677888999999999999999963 3444442 232 22 899999999999999985
Q ss_pred CCcccCCceeCCCCCeEcCCCCCCCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhCC
Q 042564 303 LNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGG 361 (498)
Q Consensus 303 l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 361 (498)
+++++ ..+|++++|++|+|||+|||+. +..+..|..||+.+|.+|.+.
T Consensus 651 --~~~l~--------~~vd~~~~t~~~~VyAiGD~~~-~~~~~~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 651 --WNELK--------ARESEWAENDIKGIYLIGDAEA-PRLIADATFTGHRVAREIEEA 698 (729)
T ss_dssp --HHHHH--------HTGGGTGGGTCCEEEECGGGTS-CCCHHHHHHHHHHHHHTTTSS
T ss_pred --HHHHh--------hhcccccccCCCCeEEEeCccc-hhhHHHHHHHHHHHHHHhhhh
Confidence 33321 1368899999999999999997 566778999999999999753
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=4.5e-31 Score=283.40 Aligned_cols=270 Identities=20% Similarity=0.242 Sum_probs=201.3
Q ss_pred ccCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhc
Q 042564 18 EQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARS 97 (498)
Q Consensus 18 ~~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~ 97 (498)
.+....+||+|||||+||++||+.|++.|++|+|+|+ ...+||+|.+..++|.
T Consensus 386 ~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~---------~~~~GG~~~~~~~~p~------------------ 438 (690)
T 3k30_A 386 RAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEA---------GRDLGGRVTQESALPG------------------ 438 (690)
T ss_dssp CCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECS---------SSSSCTHHHHHHTSTT------------------
T ss_pred CcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEec---------CCCCCCEeeeccCCCc------------------
Confidence 3445578999999999999999999999999999995 4567888754333331
Q ss_pred CCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhC-CcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCC
Q 042564 98 YGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~ 176 (498)
..++..+.. ++...+.+. +++++.++. +...++ ..+.||+||+|||+.
T Consensus 439 ---------~~~~~~~~~-----------~~~~~~~~~~gv~~~~~~~---------v~~~~~--~~~~~d~lvlAtG~~ 487 (690)
T 3k30_A 439 ---------LSAWGRVKE-----------YREAVLAELPNVEIYRESP---------MTGDDI--VEFGFEHVITATGAT 487 (690)
T ss_dssp ---------CGGGGHHHH-----------HHHHHHHTCTTEEEESSCC---------CCHHHH--HHTTCCEEEECCCEE
T ss_pred ---------hhHHHHHHH-----------HHHHHHHHcCCCEEEECCe---------ecHHHH--hhcCCCEEEEcCCCc
Confidence 011222222 233344554 788776531 111122 257899999999998
Q ss_pred --------CCCCCCCCCC--cccChHHHhcccc-CCCeEEEEc--CCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCC-CH
Q 042564 177 --------AQRAPIPGQE--LAITSDEALSLEE-LPKRAVVLG--GGYIAVEFASIWRGMGSTVDLLFRKELPLRGF-DD 242 (498)
Q Consensus 177 --------p~~p~i~g~~--~~~~~~~~~~l~~-~~~~v~ViG--~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~-~~ 242 (498)
|..|++||.+ .+++..+++.... ..++++||| +|.+|+|+|..|.+.|.+|+++++.+.+++.. ++
T Consensus 488 ~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~ 567 (690)
T 3k30_A 488 WRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNT 567 (690)
T ss_dssp ECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGG
T ss_pred cccccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccc
Confidence 4577888875 4677777766432 356899999 99999999999999999999999988876653 35
Q ss_pred HHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEE---CCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeE
Q 042564 243 EMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT---DHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVK 319 (498)
Q Consensus 243 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~---~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~ 319 (498)
.....+.+.+++.||++++++.|.++.. ++..+.. .+++++++|.||+|+|++|+.+++ +..+.. +.
T Consensus 568 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~--~~l~~~----~~-- 637 (690)
T 3k30_A 568 FEVNRIQRRLIENGVARVTDHAVVAVGA--GGVTVRDTYASIERELECDAVVMVTARLPREELY--LDLVAR----RD-- 637 (690)
T ss_dssp TCHHHHHHHHHHTTCEEEESEEEEEEET--TEEEEEETTTCCEEEEECSEEEEESCEEECCHHH--HHHHHH----HH--
T ss_pred hhHHHHHHHHHHCCCEEEcCcEEEEEEC--CeEEEEEccCCeEEEEECCEEEECCCCCCChHHH--HHHhhh----hc--
Confidence 5677888899999999999999999964 4444443 255689999999999999999863 332211 11
Q ss_pred cCCCCCCCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhCC
Q 042564 320 VDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGG 361 (498)
Q Consensus 320 vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 361 (498)
+|+.|+|||+|||+.. .....|..||+.+|++|.+.
T Consensus 638 -----~t~~~~VyaiGD~~~~-~~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 638 -----AGEIASVRGIGDAWAP-GTIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp -----HTSCSEEEECGGGTSC-BCHHHHHHHHHHHHHHTTCC
T ss_pred -----ccCCCCEEEEeCCCch-hhHHHHHHHHHHHHHHHHhh
Confidence 8899999999999985 45566999999999999865
No 87
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.96 E-value=4.5e-29 Score=257.66 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=185.7
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
.++||+|||||++|+++|.+|++. ++|+|+|+ ...+||.+.+... ..+++.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~---------~~~~GG~~~~~~~-------------------~~~g~~ 157 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEE---------RGWLGGDMWLKGI-------------------KQEGFN 157 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECT---------TSSSSCSGGGTCS-------------------EETTTT
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeC---------CCCCCCeeecccc-------------------ccCCCC
Confidence 458999999999999999999999 99999994 3446777643210 001111
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEe-CCCceEEEEcCeEEEcCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQ-LDGTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~-~~g~~~~~~~d~liiAtG~~p 177 (498)
. +..++. ..+...+ +.+++++.++ +..++ ...+.+.. .+++...+.||+||+|||+.|
T Consensus 158 ~------~~~~~~-----------~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 158 K------DSRKVV-----------EELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp E------EHHHHH-----------HHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred C------CHHHHH-----------HHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 0 111111 1111222 4578876654 33333 23343332 344445799999999999999
Q ss_pred CCCCCCCCCc--ccChHHHhccc-----cCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHH
Q 042564 178 QRAPIPGQEL--AITSDEALSLE-----ELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAR 250 (498)
Q Consensus 178 ~~p~i~g~~~--~~~~~~~~~l~-----~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~ 250 (498)
+.|++||.+. +++..++..+. ...++++|+|+|++|+| +
T Consensus 220 ~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle----------------------------------~ 265 (493)
T 1y56_A 220 STMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI----------------------------------Q 265 (493)
T ss_dssp CCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH----------------------------------H
T ss_pred cCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH----------------------------------H
Confidence 9999998753 55555544321 23489999999999988 4
Q ss_pred HHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCcee--CCCCCeE-cCCCCCCC
Q 042564 251 NLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEV--DQTGAVK-VDENSRTN 327 (498)
Q Consensus 251 ~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~--~~~g~i~-vd~~~~t~ 327 (498)
.+++.||++++++.|.++..+++...+.+.+|+++++|.||+|+|++|+.++ ++.+|+++ +++|+|. ||++++ +
T Consensus 266 ~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l--~~~~g~~~~~~~~g~i~~vd~~~~-s 342 (493)
T 1y56_A 266 ELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINP--ITQAGGKLRFRRGYYSPVLDEYHR-I 342 (493)
T ss_dssp HHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHH--HHHTTCCEEEETTEEEECCCTTSE-E
T ss_pred HHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchH--HHhcCCCccccCCceeeccccccC-c
Confidence 5667899999999999998665445677888889999999999999999987 56666654 5778887 899999 9
Q ss_pred CCCeEEecccCCCCCChHHHHHHHHHHHHHHhC
Q 042564 328 VPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 328 ~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 360 (498)
.|+|||+|||++. .++..|..||+++|.+|.+
T Consensus 343 ~~~vya~GD~~~~-~~~~~A~~~g~~aa~~i~~ 374 (493)
T 1y56_A 343 KDGIYVAGSAVSI-KPHYANYLEGKLVGAYILK 374 (493)
T ss_dssp ETTEEECSTTTCC-CCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCc-cCHHHHHHHHHHHHHHHHH
Confidence 9999999999984 5788999999999999975
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=6.6e-29 Score=265.92 Aligned_cols=255 Identities=21% Similarity=0.332 Sum_probs=191.1
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
..+||+|||||+||++||..|++.|++|+|||+ ...+||+|.+..++|.+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~---------~~~~gg~~~~~~~~~~~--------------------- 421 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDA---------HSEIGGQFNIAKQIPGK--------------------- 421 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEES---------SSSSCTTHHHHTTSTTC---------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeC---------CCCCCCeeeccccCCCH---------------------
Confidence 458999999999999999999999999999994 34578887654444421
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEE-EcCeEEEcCCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSY-SAKHILIATGSRAQRA 180 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~-~~d~liiAtG~~p~~p 180 (498)
.++..+. .++...+++.+++++.++... . . .+ .||+||||||++|+.|
T Consensus 422 ------~~~~~~~-----------~~~~~~~~~~gv~~~~~~~v~---------~-~----~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 422 ------EEFYETL-----------RYYRRMIEVTGVTLKLNHTVT---------A-D----QLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ------TTHHHHH-----------HHHHHHHHHHTCEEEESCCCC---------S-S----SSCCSSEEEECCCEEECCC
T ss_pred ------HHHHHHH-----------HHHHHHHHHcCCEEEeCcEec---------H-H----HhhcCCEEEEccCCCcCCC
Confidence 1111111 123344556689988865211 0 1 24 8999999999999999
Q ss_pred CCCCCCc--ccChHHHhccc-cCCCeEEEEcCCHHHHHHHHHHHHCCC--------------------------------
Q 042564 181 PIPGQEL--AITSDEALSLE-ELPKRAVVLGGGYIAVEFASIWRGMGS-------------------------------- 225 (498)
Q Consensus 181 ~i~g~~~--~~~~~~~~~l~-~~~~~v~ViG~G~~g~e~a~~l~~~g~-------------------------------- 225 (498)
++||.+. +++..+.+... ..+++|+|||+|++|+|+|..|.+.|.
T Consensus 471 ~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 550 (671)
T 1ps9_A 471 PIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQI 550 (671)
T ss_dssp CCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCC
T ss_pred CCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccccccccccccccc
Confidence 9999753 56666666543 357899999999999999999998773
Q ss_pred -----cEEEEeeCCCCCCC-CCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCC--eEEEcCEEEEecCCC
Q 042564 226 -----TVDLLFRKELPLRG-FDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHG--EEIVADVVLFATGRA 297 (498)
Q Consensus 226 -----~V~lv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~ 297 (498)
+|+++++.+..+.. +++.....+.+.+++.||++++++.+.++. ++++.+. .+| +++++|.||+|+|++
T Consensus 551 ~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 551 PRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp CCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred CCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 45677776655543 667777788889999999999999999986 3454444 566 579999999999999
Q ss_pred cCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecccCCCC-CChHHHHHHHHHHHHHH
Q 042564 298 PNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRM-NLTPVALMEGTCFAKTV 358 (498)
Q Consensus 298 p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~-~~~~~A~~~g~~aa~~i 358 (498)
||.+++ +.+ . ...++||++|||+... ..+..|++||..+|.||
T Consensus 628 p~~~l~--~~l----~------------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 628 PNRALA--QPL----I------------DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp ECCTTH--HHH----H------------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred ccHHHH--HHH----H------------hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 999863 221 1 1236899999998753 46889999999999985
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.96 E-value=9.9e-29 Score=256.90 Aligned_cols=300 Identities=20% Similarity=0.246 Sum_probs=196.9
Q ss_pred CccEEEECCChhHHHHHHHHH-hCCCcEEEEccCCCCCCCCcCCCcccccccc---Cc---hhhHHHHHHhHhhHHHhhh
Q 042564 23 DFDLFVIGAGSGGVRAARFSA-NFGAKVGICELPFHPISSEVIGGVGGTCVIR---GC---VPKKILVYGASFGGELEDA 95 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~-~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~---g~---~p~~~l~~~~~~~~~~~~~ 95 (498)
++||+|||||++|+++|..|+ +.|.+|+|+|+ ...+||+|.+. || +|++.+... +.... .
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~---------~~~~GGtw~~~~ypg~~~d~~s~~~~~~--~~~~~--~ 74 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDK---------ADGPGGTWYWNRYPGALSDTESHLYRFS--FDRDL--L 74 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEES---------SSSSCTHHHHCCCTTCEEEEEGGGSSCC--SCHHH--H
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEEC---------CCCCCCcccccCCCCceecCCcceeeec--ccccc--c
Confidence 589999999999999999999 89999999995 46788998543 44 443222111 00000 0
Q ss_pred hcCCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCc--EEEEeE-EEEE--eC--CEEEEEeCCCceEEEEcCe
Q 042564 96 RSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGV--KLYEGE-GKIV--GP--NEVEVTQLDGTKLSYSAKH 168 (498)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~~~-~~~i--~~--~~~~v~~~~g~~~~~~~d~ 168 (498)
..+.+.. ...+..+ +..++....++.++ .+..++ +..+ +. ..+.|.+.+|+ +++||+
T Consensus 75 ~~~~~~~---~~~~~~e-----------i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~--~i~ad~ 138 (540)
T 3gwf_A 75 QESTWKT---TYITQPE-----------ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGE--VYRAKY 138 (540)
T ss_dssp HHCCCSB---SEEEHHH-----------HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSC--EEEEEE
T ss_pred cCCCCcc---cCCCHHH-----------HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCC--EEEeCE
Confidence 0111110 0111122 22334445555666 555554 3333 33 37888888876 789999
Q ss_pred EEEcCC--CCCCCCCCCCCCc-----ccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC-CCC-
Q 042564 169 ILIATG--SRAQRAPIPGQEL-----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP-LRG- 239 (498)
Q Consensus 169 liiAtG--~~p~~p~i~g~~~-----~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~-l~~- 239 (498)
||+||| +.|..|++||.+. +++..........+++|+|||+|.+|+|+|..|.+.+.+|+++.|.+.+ ++.
T Consensus 139 lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~ 218 (540)
T 3gwf_A 139 VVNAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVG 218 (540)
T ss_dssp EEECCCSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECC
T ss_pred EEECCcccccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCc
Confidence 999999 7899999999763 2233222234456799999999999999999999999999999999873 333
Q ss_pred ---CCHHHHHHHHH------------------------------------------------------------------
Q 042564 240 ---FDDEMRAVVAR------------------------------------------------------------------ 250 (498)
Q Consensus 240 ---~~~~~~~~l~~------------------------------------------------------------------ 250 (498)
+.+...+.+.+
T Consensus 219 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 298 (540)
T 3gwf_A 219 NRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEA 298 (540)
T ss_dssp CCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHH
T ss_pred cCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHH
Confidence 23332222220
Q ss_pred ----------------------------------------HHHhCCCEEEc--CccEEEEEEeCCeEEEEECCCeEEEcC
Q 042564 251 ----------------------------------------NLEGRGINLHP--RTTIKELIKSEEGVKVITDHGEEIVAD 288 (498)
Q Consensus 251 ----------------------------------------~l~~~Gv~i~~--~~~v~~i~~~~~~~~v~~~~g~~i~~D 288 (498)
.+.+.+|+++. +..|.+|..+ .|.+.+|+.+++|
T Consensus 299 ~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~----gv~~~dG~~~~~D 374 (540)
T 3gwf_A 299 AASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK----GVVTEDGVLHELD 374 (540)
T ss_dssp HHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS----EEEETTCCEEECS
T ss_pred HHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC----eEEcCCCCEEECC
Confidence 01144788874 5688888543 3788999999999
Q ss_pred EEEEecCCCcCCCCCCcccCCceeCCCCCeEcC----------CCCCC-CCCCeEEe-cccCCCCCChHHHHHHHHHHHH
Q 042564 289 VVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVD----------ENSRT-NVPSIWAV-GDVTNRMNLTPVALMEGTCFAK 356 (498)
Q Consensus 289 ~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd----------~~~~t-~~~~iya~-GD~~~~~~~~~~A~~~g~~aa~ 356 (498)
.||+|||++++..++ .. +.+...+++.++ ..+.+ +.||+|++ |...........+..|++++++
T Consensus 375 vIV~ATGf~~~~~~~--~~--~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~ 450 (540)
T 3gwf_A 375 VLVFATGFDAVDGNY--RR--IEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISD 450 (540)
T ss_dssp EEEECCCBSCSSHHH--HT--SEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHH
T ss_pred EEEECCccCccccCc--Cc--ceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHH
Confidence 999999999997432 22 222111223333 22333 88999999 8766544455677889999998
Q ss_pred HHh
Q 042564 357 TVF 359 (498)
Q Consensus 357 ~i~ 359 (498)
.|.
T Consensus 451 ~i~ 453 (540)
T 3gwf_A 451 TIG 453 (540)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.95 E-value=8.1e-27 Score=242.75 Aligned_cols=303 Identities=19% Similarity=0.162 Sum_probs=187.0
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHH-Hh--hhhcC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGE-LE--DARSY 98 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~-~~--~~~~~ 98 (498)
.++||+|||||++|+++|.+|++.|.+|+|||+ ...+||+|. ..|.|.......+..+.. .. ....+
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~---------~~~~GGtw~-~~~yPg~~~d~~~~~y~~~f~~~~~~~~ 77 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEA---------GEDVGGTWY-WNRYPGCRLDTESYAYGYFALKGIIPEW 77 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCTHHH-HCCCTTCBCSSCHHHHCHHHHTTSSTTC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCccc-cCCCCceeecCchhhcccccCcccccCC
Confidence 458999999999999999999999999999995 467899984 455552110000000000 00 00001
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCc--EEEEeE-EEEE----eCCEEEEEeCCCceEEEEcCeEEE
Q 042564 99 GWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGV--KLYEGE-GKIV----GPNEVEVTQLDGTKLSYSAKHILI 171 (498)
Q Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~~~-~~~i----~~~~~~v~~~~g~~~~~~~d~lii 171 (498)
.+. ....+..++.. ++....++.++ .+..++ +..+ +...+.|.+.+|+ +++||+||+
T Consensus 78 ~~~---~~~~~~~ei~~-----------yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~--~~~ad~lV~ 141 (545)
T 3uox_A 78 EWS---ENFASQPEMLR-----------YVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEE--VVTCRFLIS 141 (545)
T ss_dssp CCS---BSSCBHHHHHH-----------HHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTE--EEEEEEEEE
T ss_pred Ccc---ccCCCHHHHHH-----------HHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCC--EEEeCEEEE
Confidence 111 01112222222 22333333343 333332 3322 2357788888875 899999999
Q ss_pred cCC--CCCCCCCCCCCCc-----ccChHHHhc-------cccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC-
Q 042564 172 ATG--SRAQRAPIPGQEL-----AITSDEALS-------LEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP- 236 (498)
Q Consensus 172 AtG--~~p~~p~i~g~~~-----~~~~~~~~~-------l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~- 236 (498)
||| +.|..|++||.+. +++...... ....+++|+|||+|.+|+|+|..|.+.+.+|+++.|.+.+
T Consensus 142 AtG~~s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i 221 (545)
T 3uox_A 142 ATGPLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWC 221 (545)
T ss_dssp CCCSCBC---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCC
T ss_pred CcCCCCCCcCCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCcc
Confidence 999 8899999999763 233322222 3345789999999999999999999999999999999873
Q ss_pred CCCC----CHHHHHHHH---------------------------------------------------------------
Q 042564 237 LRGF----DDEMRAVVA--------------------------------------------------------------- 249 (498)
Q Consensus 237 l~~~----~~~~~~~l~--------------------------------------------------------------- 249 (498)
++.. ++...+.+.
T Consensus 222 ~p~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 301 (545)
T 3uox_A 222 TPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKES 301 (545)
T ss_dssp EECCCCBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHH
T ss_pred ccCCcCCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHH
Confidence 3322 222221111
Q ss_pred --------------------------------------------HHHHhCCCEEEc--CccEEEEEEeCCeEEEEECCCe
Q 042564 250 --------------------------------------------RNLEGRGINLHP--RTTIKELIKSEEGVKVITDHGE 283 (498)
Q Consensus 250 --------------------------------------------~~l~~~Gv~i~~--~~~v~~i~~~~~~~~v~~~~g~ 283 (498)
+.|.+.+|+++. +..|.+|..+ .|.+.+|
T Consensus 302 ~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~----gv~~~dG- 376 (545)
T 3uox_A 302 NKFLADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPE----GIKTADA- 376 (545)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETT----EEEESSC-
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccC----eEEeCCC-
Confidence 112233777775 6688888543 3778899
Q ss_pred EEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCC-----------CCCCCCCeEEecccCCC---CCChHHHHH
Q 042564 284 EIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDEN-----------SRTNVPSIWAVGDVTNR---MNLTPVALM 349 (498)
Q Consensus 284 ~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~-----------~~t~~~~iya~GD~~~~---~~~~~~A~~ 349 (498)
.+++|.||+|||+++++..+ . ++++...++..+++. +-.+.||+|.+.--... ......+..
T Consensus 377 ~~~~D~IV~ATGf~~~~~~~--~--~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~ 452 (545)
T 3uox_A 377 AYDLDVIIYATGFDAVTGSL--D--RIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGL 452 (545)
T ss_dssp EEECSEEEECCCCBSSSCSC--T--TSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHH
T ss_pred eeecCEEEECCccccccccC--C--CceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHH
Confidence 89999999999999987653 2 233322223334321 12378999998543321 344567788
Q ss_pred HHHHHHHHHh
Q 042564 350 EGTCFAKTVF 359 (498)
Q Consensus 350 ~g~~aa~~i~ 359 (498)
|++++++.|.
T Consensus 453 ~~~~i~~~i~ 462 (545)
T 3uox_A 453 QAEWVLRMIS 462 (545)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998874
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=3e-26 Score=238.69 Aligned_cols=301 Identities=18% Similarity=0.225 Sum_probs=190.4
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccccc---Cc---hhhHHHHHHhHhhHHHhh
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIR---GC---VPKKILVYGASFGGELED 94 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~---g~---~p~~~l~~~~~~~~~~~~ 94 (498)
..++||+|||||++|+++|..|++.|.+|+|||+ ...+||+|.+. || +|++.+... +....
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~---------~~~~GGtw~~~~ypg~~~dv~s~~y~~~--f~~~~-- 85 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEA---------ASGVGGVWYWNRYPGARCDVESIDYSYS--FSPEL-- 85 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCTHHHHCCCTTCBCSSCTTTSSCC--SCHHH--
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCccccCCCCCceeCCCchhcccc--ccccc--
Confidence 4468999999999999999999999999999995 56789998632 55 453322111 00000
Q ss_pred hhcCCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCc--EEEEeE-EEEE--eC--CEEEEEeCCCceEEEEcC
Q 042564 95 ARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGV--KLYEGE-GKIV--GP--NEVEVTQLDGTKLSYSAK 167 (498)
Q Consensus 95 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~~~-~~~i--~~--~~~~v~~~~g~~~~~~~d 167 (498)
...+.+. ....+..+ +..++....++.++ .+..++ +..+ +. ..+.|.+.+|+ +++||
T Consensus 86 ~~~~~~~---~~~~~~~e-----------i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~--~i~ad 149 (549)
T 4ap3_A 86 EQEWNWS---EKYATQPE-----------ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGD--EVSAR 149 (549)
T ss_dssp HHHCCCS---SSSCBHHH-----------HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCC--EEEEE
T ss_pred ccCCCCc---cCCCCHHH-----------HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCC--EEEeC
Confidence 0011111 00111222 22334444555565 455543 3333 33 37888888876 79999
Q ss_pred eEEEcCC--CCCCCCCCCCCCc----ccChHHHh--ccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC-CC
Q 042564 168 HILIATG--SRAQRAPIPGQEL----AITSDEAL--SLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP-LR 238 (498)
Q Consensus 168 ~liiAtG--~~p~~p~i~g~~~----~~~~~~~~--~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~-l~ 238 (498)
+||+||| +.|..|++||.+. .+.+.... .....+++|+|||+|.+|+|+|..|.+.+.+|+++.|.+.+ ++
T Consensus 150 ~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp 229 (549)
T 4ap3_A 150 FLVVAAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIP 229 (549)
T ss_dssp EEEECCCSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEE
T ss_pred EEEECcCCCCCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCcccc
Confidence 9999999 8999999999863 22222221 23335799999999999999999999999999999999874 33
Q ss_pred CCCHHHHHHHHH--------------------------------------------------------------------
Q 042564 239 GFDDEMRAVVAR-------------------------------------------------------------------- 250 (498)
Q Consensus 239 ~~~~~~~~~l~~-------------------------------------------------------------------- 250 (498)
..++++.....+
T Consensus 230 ~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (549)
T 4ap3_A 230 AGNVPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDT 309 (549)
T ss_dssp CC----CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHH
T ss_pred CcCCCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHH
Confidence 322221111110
Q ss_pred ------------------------------------------HHHhCCCEEE--cCccEEEEEEeCCeEEEEECCCeEEE
Q 042564 251 ------------------------------------------NLEGRGINLH--PRTTIKELIKSEEGVKVITDHGEEIV 286 (498)
Q Consensus 251 ------------------------------------------~l~~~Gv~i~--~~~~v~~i~~~~~~~~v~~~~g~~i~ 286 (498)
.+.+.+|+++ ....|.+|..+ .|.+.+| .++
T Consensus 310 ~~~~~~~~~~~~v~d~~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~----gv~~~dG-~~~ 384 (549)
T 4ap3_A 310 ARAFWEEKIRAVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDET----GIVTTGA-HYD 384 (549)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETT----EEEESSC-EEE
T ss_pred HHHHHHHHHHHHcCCHHHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCC----cEEeCCC-cee
Confidence 0122377776 24678888542 3778899 899
Q ss_pred cCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCC--------C--CC-CCCCCeEEecccCCC---CCChHHHHHHHH
Q 042564 287 ADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDE--------N--SR-TNVPSIWAVGDVTNR---MNLTPVALMEGT 352 (498)
Q Consensus 287 ~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~--------~--~~-t~~~~iya~GD~~~~---~~~~~~A~~~g~ 352 (498)
+|.||+|||++++..++ .. +.+...+++.+++ + +. .+.||+|.+.--... ......+..|++
T Consensus 385 ~D~iI~ATGf~~~~~~~--~~--~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~ 460 (549)
T 4ap3_A 385 LDMIVLATGFDAMTGSL--DK--LEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVD 460 (549)
T ss_dssp CSEEEECCCEEESSTTG--GG--SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHH
T ss_pred cCEEEECCccccccccc--Cc--eeEECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHH
Confidence 99999999999987542 22 2222222344442 1 22 278999998433321 334556778899
Q ss_pred HHHHHHh
Q 042564 353 CFAKTVF 359 (498)
Q Consensus 353 ~aa~~i~ 359 (498)
++++.|.
T Consensus 461 ~i~~~i~ 467 (549)
T 4ap3_A 461 WVADAIA 467 (549)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988774
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=9.6e-26 Score=235.62 Aligned_cols=303 Identities=17% Similarity=0.172 Sum_probs=187.3
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHH---HhhhhcC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGE---LEDARSY 98 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~---~~~~~~~ 98 (498)
.++||+|||||++|+++|..|++.|.+|+|+|+ ...+||+|. .+|.|...+...+..+.. ......+
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~---------~~~~GG~w~-~~~~pg~~~d~~~~~~~~~f~~~~~~~~ 84 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIET---------AGDVGGVWY-WNRYPGARCDIESIEYCYSFSEEVLQEW 84 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCTHHH-HCCCTTCBCSSCTTTSSCCSCHHHHHHC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCccc-ccCCCceeecccccccccccChhhhhcc
Confidence 468999999999999999999999999999995 456889984 345553111000000000 0000001
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCC--cEEEEeE-EEEE--e--CCEEEEEeCCCceEEEEcCeEEE
Q 042564 99 GWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAG--VKLYEGE-GKIV--G--PNEVEVTQLDGTKLSYSAKHILI 171 (498)
Q Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~~~-~~~i--~--~~~~~v~~~~g~~~~~~~d~lii 171 (498)
.+. ....+..++. .++....++.+ +.+..++ +..+ + ...+.|.+.+|+ ++++|+||+
T Consensus 85 ~~~---~~~~~~~~i~-----------~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~--~~~ad~vV~ 148 (542)
T 1w4x_A 85 NWT---ERYASQPEIL-----------RYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGD--RIRARYLIM 148 (542)
T ss_dssp CCC---BSSCBHHHHH-----------HHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCC--EEEEEEEEE
T ss_pred Ccc---cccCCHHHHH-----------HHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCC--EEEeCEEEE
Confidence 110 0011112222 22223333333 3344443 3332 2 246888887775 789999999
Q ss_pred cCC--CCCCCCCCCCCCc-----ccChHHHhc-cccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC-CC---
Q 042564 172 ATG--SRAQRAPIPGQEL-----AITSDEALS-LEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL-RG--- 239 (498)
Q Consensus 172 AtG--~~p~~p~i~g~~~-----~~~~~~~~~-l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l-~~--- 239 (498)
||| +.|..|++||.+. +++...... ....+++|+|||+|.+|+|++..+.+.+.+|+++.|.+.+. +.
T Consensus 149 AtG~~s~p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~ 228 (542)
T 1w4x_A 149 ASGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNA 228 (542)
T ss_dssp CCCSCCCCCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCC
T ss_pred CcCCCCCCCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCC
Confidence 999 6788999998753 222221111 23357999999999999999999999999999999987652 22
Q ss_pred -CCHHHHHH-----------------------------------------------------------------------
Q 042564 240 -FDDEMRAV----------------------------------------------------------------------- 247 (498)
Q Consensus 240 -~~~~~~~~----------------------------------------------------------------------- 247 (498)
+.++..+.
T Consensus 229 ~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 308 (542)
T 1w4x_A 229 PLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEF 308 (542)
T ss_dssp BCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHH
Confidence 12211110
Q ss_pred HHH-----------------------------------HHHhCCCEEE--cCccEEEEEEeCCeEEEEECCCeEEEcCEE
Q 042564 248 VAR-----------------------------------NLEGRGINLH--PRTTIKELIKSEEGVKVITDHGEEIVADVV 290 (498)
Q Consensus 248 l~~-----------------------------------~l~~~Gv~i~--~~~~v~~i~~~~~~~~v~~~~g~~i~~D~v 290 (498)
+.+ .+.+.+|+++ .+..|.++.. + .|+++| +++++|.|
T Consensus 309 ~~~~~~~~~~~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~--~--gv~~~d-~~~~~D~i 383 (542)
T 1w4x_A 309 IRNKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP--R--GVRTSE-REYELDSL 383 (542)
T ss_dssp HHHHHHHHCSSHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS--S--EEEESS-CEEECSEE
T ss_pred HHHHHHHHcCCHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC--C--eEEeCC-eEEecCEE
Confidence 001 1112346665 3557777743 2 377788 88999999
Q ss_pred EEecCCCcCCCCCCcccCCceeCCCCCeEcCC--------C--CC-CCCCCeEEe-cccCC--CCCChHHHHHHHHHHHH
Q 042564 291 LFATGRAPNTKRLNLKAVGVEVDQTGAVKVDE--------N--SR-TNVPSIWAV-GDVTN--RMNLTPVALMEGTCFAK 356 (498)
Q Consensus 291 i~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~--------~--~~-t~~~~iya~-GD~~~--~~~~~~~A~~~g~~aa~ 356 (498)
|+|||+++++.+ +...++. +.+| +.+++ + +. ...||+|++ |+.+. .......|..|++++++
T Consensus 384 i~atG~~~~~~~--~~~~~i~-g~~G-~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~ 459 (542)
T 1w4x_A 384 VLATGFDALTGA--LFKIDIR-GVGN-VALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTD 459 (542)
T ss_dssp EECCCCCCTTHH--HHTSEEE-CGGG-CBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHH
T ss_pred EEcCCccccccC--cCceeeE-CCCC-CCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHH
Confidence 999999998765 2332222 2333 33332 2 22 278999998 99864 24455789999999999
Q ss_pred HHh
Q 042564 357 TVF 359 (498)
Q Consensus 357 ~i~ 359 (498)
+|.
T Consensus 460 ~i~ 462 (542)
T 1w4x_A 460 HIA 462 (542)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.90 E-value=2.9e-23 Score=184.94 Aligned_cols=151 Identities=20% Similarity=0.303 Sum_probs=134.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC---------CC-----CHHHHHHHHHHHHhCCCEEEcCccEEEE
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR---------GF-----DDEMRAVVARNLEGRGINLHPRTTIKEL 268 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~---------~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v~~i 268 (498)
+++|||+|++|+++|..|.+.|.+|+++++.+..+. .+ ++++.+.+.+.+++.|++++++ +|.++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 689999999999999999999999999999876552 23 4788999999999999999999 99999
Q ss_pred EEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecccCCCCC-ChHHH
Q 042564 269 IKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMN-LTPVA 347 (498)
Q Consensus 269 ~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~-~~~~A 347 (498)
..+++.+.+.+++| ++++|.||+|+|..|+. ++..|++++ +|.|.||++++|+.|+|||+|||+..+. +++.|
T Consensus 82 ~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~----~~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~~~~~~~~~~A 155 (180)
T 2ywl_A 82 RDMGGVFEVETEEG-VEKAERLLLCTHKDPTL----PSLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVARGKVPGHAIIS 155 (180)
T ss_dssp EECSSSEEEECSSC-EEEEEEEEECCTTCCHH----HHHHTCCEE-TTEECCCTTCBCSSTTEEECGGGGTCCSCCHHHH
T ss_pred EEcCCEEEEEECCC-EEEECEEEECCCCCCCc----cccCCCCcc-CceEEeCCCCCcCCCCEEEeecccCcchhhHHHH
Confidence 88777778888888 79999999999999864 356678888 8899999999999999999999999765 88999
Q ss_pred HHHHHHHHHHHhC
Q 042564 348 LMEGTCFAKTVFG 360 (498)
Q Consensus 348 ~~~g~~aa~~i~~ 360 (498)
..||+++|.||.+
T Consensus 156 ~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 156 AGDGAYVAVHLVS 168 (180)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHH
Confidence 9999999999975
No 94
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.83 E-value=4.3e-22 Score=204.07 Aligned_cols=311 Identities=16% Similarity=0.209 Sum_probs=176.6
Q ss_pred cEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccc--ccccCchhhHHHHHH-----------------
Q 042564 25 DLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGT--CVIRGCVPKKILVYG----------------- 85 (498)
Q Consensus 25 dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~--~~~~g~~p~~~l~~~----------------- 85 (498)
||+|||||+||+++|+.|++.|.+|+|+||. ..........||. |.+.+|.|.+.+...
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~--~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~ 78 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR--IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT 78 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC--CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 7999999999999999999999999999963 1111111112232 445556665433221
Q ss_pred hHhhHHHhhhhcCCcccccc----cccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEE--eCCEEE-EEeC
Q 042564 86 ASFGGELEDARSYGWEVHEK----IDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIV--GPNEVE-VTQL 157 (498)
Q Consensus 86 ~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i--~~~~~~-v~~~ 157 (498)
......+..+..+|.++... ....+.......+..-..+...+.+.+++.+++++.++ + .+ +.+.+. +...
T Consensus 79 ~~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~ 157 (472)
T 2e5v_A 79 SEAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEET
T ss_pred HHHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEE
Confidence 01122334444555544320 00000000000000011222333444466799999886 5 44 445442 2222
Q ss_pred CCceEEEEcCeEEEcCCCCCCCCCCCCCCcccChHHH----------hccccCC--CeEEEEcCCHHHHHHHHHHHHCCC
Q 042564 158 DGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEA----------LSLEELP--KRAVVLGGGYIAVEFASIWRGMGS 225 (498)
Q Consensus 158 ~g~~~~~~~d~liiAtG~~p~~p~i~g~~~~~~~~~~----------~~l~~~~--~~v~ViG~G~~g~e~a~~l~~~g~ 225 (498)
+. ...+.+|.||+|||+.+..++++......+.+.+ ..++... ..++++|+| +++++..++..|.
T Consensus 158 ~~-~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~ 234 (472)
T 2e5v_A 158 KR-GLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGA 234 (472)
T ss_dssp TT-EEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHTTC
T ss_pred eC-CCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCCce
Confidence 11 1257799999999998876654322222233221 1111111 134456766 8888889999998
Q ss_pred cEEEEeeCCCCCCCCCHHH--------HHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEE-cCEEEEecCC
Q 042564 226 TVDLLFRKELPLRGFDDEM--------RAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIV-ADVVLFATGR 296 (498)
Q Consensus 226 ~V~lv~~~~~~l~~~~~~~--------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~-~D~vi~a~G~ 296 (498)
.+ +..+++++++.++++. ...+.+.+++.|. ++++... + +. + .+.++ .+.++.+.|.
T Consensus 235 ~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~---~~-----~--~~~~~~~~~~~~~~G~ 300 (472)
T 2e5v_A 235 QI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--I---ED-----F--ERKFPVVAKYLARHGH 300 (472)
T ss_dssp EE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--C---TT-----H--HHHCHHHHHHHHHTTC
T ss_pred EE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--h---HH-----H--HHHhHHHHHHHHHhCc
Confidence 77 7788888876555432 5566666766653 3332210 0 00 0 01232 4667888899
Q ss_pred CcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEecccCC-C----CCChHHHHHHHHHHHHHH
Q 042564 297 APNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTN-R----MNLTPVALMEGTCFAKTV 358 (498)
Q Consensus 297 ~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~GD~~~-~----~~~~~~A~~~g~~aa~~i 358 (498)
.|+ +++...... ....|+|.||+++||++|+|||+|||++ . ..+...+..+|.+.++.+
T Consensus 301 dp~-~~i~v~p~~--~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a 364 (472)
T 2e5v_A 301 NYK-VKIPIFPAA--HFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINL 364 (472)
T ss_dssp CTT-SCEECEEEE--EEESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHG
T ss_pred Ccc-cceEeehhh--ceeCCCeEECCCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHH
Confidence 999 664332222 2336899999999999999999999987 3 256777777766655554
No 95
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.82 E-value=5.1e-18 Score=175.16 Aligned_cols=236 Identities=19% Similarity=0.199 Sum_probs=140.7
Q ss_pred HHhHHHHHHHHhCCcEEEEeE-EEEE---eC-------CEEEEEeC---CCceEEEEcCeEEEcCCCCCCCCCCCCC-Cc
Q 042564 123 RLNGIYKRLLSNAGVKLYEGE-GKIV---GP-------NEVEVTQL---DGTKLSYSAKHILIATGSRAQRAPIPGQ-EL 187 (498)
Q Consensus 123 ~~~~~~~~~~~~~gv~~~~~~-~~~i---~~-------~~~~v~~~---~g~~~~~~~d~liiAtG~~p~~p~i~g~-~~ 187 (498)
++..+++...++.+..+..++ +..+ +. ..+.|+.. .|+..++.++.||+|||..|.+|..++. ..
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~ 225 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPR 225 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCCTTSCCCTT
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCCCCCCCCcc
Confidence 344555555555555555554 3333 21 24677653 3556789999999999999988875543 23
Q ss_pred ccChHHHhc-------cccCCCeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCCC---------CCHHHH----
Q 042564 188 AITSDEALS-------LEELPKRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPLRG---------FDDEMR---- 245 (498)
Q Consensus 188 ~~~~~~~~~-------l~~~~~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l~~---------~~~~~~---- 245 (498)
++.+.++.. -...+|+|+|||+|.+|+|++..|.+. +.+|+++.|.+.+.+. +.++..
T Consensus 226 v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~ 305 (501)
T 4b63_A 226 IIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFY 305 (501)
T ss_dssp EEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHH
T ss_pred eeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCccccccccccchhhcCHHHHHHHH
Confidence 443333322 123478999999999999999999764 6799999998765432 111111
Q ss_pred -------HH--------------------HHH-----HHH-----hCCCEEEcCccEEEEEEeCC--eE-----------
Q 042564 246 -------AV--------------------VAR-----NLE-----GRGINLHPRTTIKELIKSEE--GV----------- 275 (498)
Q Consensus 246 -------~~--------------------l~~-----~l~-----~~Gv~i~~~~~v~~i~~~~~--~~----------- 275 (498)
.. +.+ .+. .....+..+..+..+..... .+
T Consensus 306 ~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~ 385 (501)
T 4b63_A 306 SQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPES 385 (501)
T ss_dssp TSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--
T ss_pred hCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeC
Confidence 11 101 111 01123455555555543222 12
Q ss_pred -EEEECCCeEEEcCEEEEecCCCcCCCC--CCcccCCceeCCCCCeEcCCCCCC--------CCCCeEEecccCC-----
Q 042564 276 -KVITDHGEEIVADVVLFATGRAPNTKR--LNLKAVGVEVDQTGAVKVDENSRT--------NVPSIWAVGDVTN----- 339 (498)
Q Consensus 276 -~v~~~~g~~i~~D~vi~a~G~~p~~~~--l~l~~~gi~~~~~g~i~vd~~~~t--------~~~~iya~GD~~~----- 339 (498)
.+.+.+|+++++|.||+|||++|+... +.. ...+..+.+|...|+.+++. ..++||+.|-+..
T Consensus 386 ~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~-~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~ 464 (501)
T 4b63_A 386 EGAANDVKETLEVDALMVATGYNRNAHERLLSK-VQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLS 464 (501)
T ss_dssp ------CCCEEEESEEEECCCEECCTHHHHTGG-GGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTT
T ss_pred CeeEeCCCeEEECCEEEECcCCCCCCcchhcch-hhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcc
Confidence 234567889999999999999988642 111 12355566777888876542 2467999985432
Q ss_pred CCCChHHHHHHHHHHHHHHhC
Q 042564 340 RMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 340 ~~~~~~~A~~~g~~aa~~i~~ 360 (498)
.+.+.-.|.+.|+++ +.|+|
T Consensus 465 ~~~Ls~~a~R~~~I~-~~l~g 484 (501)
T 4b63_A 465 DSLLSVLAVRGGEMV-QSIFG 484 (501)
T ss_dssp TTSSTTHHHHHHHHH-HHHHH
T ss_pred hhhHHHHHHHHHHHH-HHHhc
Confidence 255666788888754 44554
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.75 E-value=2.3e-19 Score=179.79 Aligned_cols=201 Identities=19% Similarity=0.224 Sum_probs=115.9
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCC-----Cccccc--cccCchhhHHHHHHhH-------
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIG-----GVGGTC--VIRGCVPKKILVYGAS------- 87 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~-----~~GG~~--~~~g~~p~~~l~~~~~------- 87 (498)
.+|||+|||||++|+++|+.|++.|.+|+|+|+ .+..+ .-||.| .+.+|.|.+.+.....
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk------~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~ 76 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDN------GKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALA 76 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECS------SSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeC------CCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHH
Confidence 358999999999999999999999999999994 22111 125677 5666766432110000
Q ss_pred ---hhHHHhhhhcCCcccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEE--e----CCEEEEEeC
Q 042564 88 ---FGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIV--G----PNEVEVTQL 157 (498)
Q Consensus 88 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i--~----~~~~~v~~~ 157 (498)
..+.+.....+|+.+... ++..++... ....+...+...+++.|++++.++ +..+ + .+.+.|.+.
T Consensus 77 ~~~~~~~~~~~~~~Gi~~~~~---~~g~~~p~~--~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~ 151 (401)
T 2gqf_A 77 RYTNWDFISLVAEQGITYHEK---ELGQLFCDE--GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVN 151 (401)
T ss_dssp HSCHHHHHHHHHHTTCCEEEC---STTEEEETT--CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEET
T ss_pred hCCHHHHHHHHHhCCCceEEC---cCCEEccCC--CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEEC
Confidence 011122223334332110 000000000 111222344455566799999886 4333 3 455777765
Q ss_pred CCceEEEEcCeEEEcCCCCCC--------------------CCCCCCCCcc-cChHH-H---hccccCCCeEEEEc----
Q 042564 158 DGTKLSYSAKHILIATGSRAQ--------------------RAPIPGQELA-ITSDE-A---LSLEELPKRAVVLG---- 208 (498)
Q Consensus 158 ~g~~~~~~~d~liiAtG~~p~--------------------~p~i~g~~~~-~~~~~-~---~~l~~~~~~v~ViG---- 208 (498)
++ .+++|+||+|||+.+. .|..|+.... ++.++ + +.....+.++.|+|
T Consensus 152 ~g---~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~~~~~i~G~~~~ 228 (401)
T 2gqf_A 152 ST---QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLPVTITALCGKSF 228 (401)
T ss_dssp TE---EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEEEEEEETTSCEE
T ss_pred CC---EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCCchhhcccCCCeeeeeEEEEcCCceE
Confidence 54 6999999999998873 2333443222 23333 3 22223355666668
Q ss_pred -----------CCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCH
Q 042564 209 -----------GGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDD 242 (498)
Q Consensus 209 -----------~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~ 242 (498)
+|+++++++..+.. |.++++ .++|.++.
T Consensus 229 ~g~~l~t~~g~sG~~~l~~s~~~~~-~~~~~i-----~~~p~~~~ 267 (401)
T 2gqf_A 229 YNQLLFTHRGISGPAVLQISNYWQP-TESVEI-----DLLPNHNV 267 (401)
T ss_dssp EEEEEECSSEEESHHHHHHTTTCCT-TCCEEE-----ESCSSSCH
T ss_pred EeCEEEECCCccHHHHHHHHHHHhc-CCEEEE-----ECCCCCCH
Confidence 89999999988765 777775 34566553
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.67 E-value=2.6e-20 Score=182.11 Aligned_cols=244 Identities=13% Similarity=0.048 Sum_probs=143.3
Q ss_pred CCccEEEECCChhHHHHHHHHHh--CCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSAN--FGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYG 99 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g 99 (498)
.++||+||||||||++||++|++ .|++|+|+|+ ...+||.|.+.+|++++.++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk---------~~~~GG~~~~~~~~~~~~~l---------------- 118 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES---------SVAPGGGSWLGGQLFSAMVM---------------- 118 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECS---------SSSCCTTTTCCSTTCCCEEE----------------
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEC---------CCCCCceEEeCCccCCHHHH----------------
Confidence 35899999999999999999975 6999999995 45689999988887742210
Q ss_pred cccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 100 WEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
+. ....++++.|+++... + ......+.++++++..+..
T Consensus 119 ---------~~----------------~~~~~~~e~Gv~~~~~---------------~--~~~~~~~~~~~~~~~~~~~ 156 (326)
T 3fpz_A 119 ---------RK----------------PAHLFLQELEIPYEDE---------------G--DYVVVKHAALFISTVLSKV 156 (326)
T ss_dssp ---------ET----------------TTHHHHHHTTCCCEEC---------------S--SEEEESCHHHHHHHHHHHH
T ss_pred ---------HH----------------HHHHHHHHcCCEEEEC---------------C--cceecceeEEEEcchhhhc
Confidence 00 0012233456665442 1 1133444555566665655
Q ss_pred CCCCCCCccc--ChHHHh---ccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHh
Q 042564 180 APIPGQELAI--TSDEAL---SLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEG 254 (498)
Q Consensus 180 p~i~g~~~~~--~~~~~~---~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~ 254 (498)
+.++|.+... ...+.. ......++++++|+|.++++.|..+...+.++++..+.........
T Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~------------- 223 (326)
T 3fpz_A 157 LQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRD------------- 223 (326)
T ss_dssp HTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBC-------------
T ss_pred cccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeeccccccccc-------------
Confidence 5666643211 001110 1123467999999999999999999999999999887654321100
Q ss_pred CCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCCCCcccCCceeCCCCCeEcCCCCCCCCCCeEEe
Q 042564 255 RGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAV 334 (498)
Q Consensus 255 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~l~~~gi~~~~~g~i~vd~~~~t~~~~iya~ 334 (498)
...... .+......+..... ......+.+|.++.+.|.+|.. ..+.+ +.|.+|..++|++|+|||+
T Consensus 224 --~~~~~~-~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~---------~~~~e-~~iv~~~~~~t~vpGv~aa 289 (326)
T 3fpz_A 224 --LSQKHG-VILSTTGHDGPFGA-FCAKRIVDIDQNQKLGGMKGLD---------MNHAE-HDVVIHSGAYAGVDNMYFA 289 (326)
T ss_dssp --TTSCCC-EEEECCCSCSSSCS-HHHHHHHHHCTTCCCCCCCCBC---------HHHHH-HHHHHHCEECTTSBTEEEC
T ss_pred --ceeecc-eEEEEecceeeEee-cceeEEEecCceeeecceeccc---------ccccC-CeEEECCCeEECCCCEEEE
Confidence 000000 11111100000000 0000123445555555554432 22222 4688889999999999999
Q ss_pred cccCCC----C---CChHHHHHHHHHHHHHHh
Q 042564 335 GDVTNR----M---NLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 335 GD~~~~----~---~~~~~A~~~g~~aa~~i~ 359 (498)
||+++. + +....++.+|+.||+.|.
T Consensus 290 GDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 290 GMEVAELDGLNRMGPTFGAMALSGVHAAEQIL 321 (326)
T ss_dssp THHHHHHHTCCBCCSCCHHHHHHHHHHHHHHH
T ss_pred chHhccccCCCcCchHHHHHHHHHHHHHHHHH
Confidence 998741 1 133345678999999875
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.62 E-value=1.4e-15 Score=140.73 Aligned_cols=157 Identities=20% Similarity=0.207 Sum_probs=114.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC-----------------CCCCC-------CHHHHHHHHHHHHhC-C
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL-----------------PLRGF-------DDEMRAVVARNLEGR-G 256 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~-----------------~l~~~-------~~~~~~~l~~~l~~~-G 256 (498)
.+|+|||+|+.|+++|..|++.|.+|+++++... ++..+ ...+.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 3799999999999999999999999999998621 00001 136677788888887 9
Q ss_pred CEEEcCccEEEEEEeCCeE-EEEECCCeEEEcCEEEEecCCCcCCCCC---------------------CcccCCceeCC
Q 042564 257 INLHPRTTIKELIKSEEGV-KVITDHGEEIVADVVLFATGRAPNTKRL---------------------NLKAVGVEVDQ 314 (498)
Q Consensus 257 v~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p~~~~l---------------------~l~~~gi~~~~ 314 (498)
++++ +++|+++..+++.+ .+.+.+|+++.+|.||+|+|..++.... .+.+.++.++.
T Consensus 84 v~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~ 162 (232)
T 2cul_A 84 LHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFVE 162 (232)
T ss_dssp EEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEEE
T ss_pred cEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEEc
Confidence 9998 56999998777663 6778888889999999999996553310 01122333321
Q ss_pred CC--------C-------eEcCC------CC-CCCCCCeEEecccCCCCCChHHHHHHHHHHHHHHhC
Q 042564 315 TG--------A-------VKVDE------NS-RTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 315 ~g--------~-------i~vd~------~~-~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 360 (498)
.. . ..+.. .+ .|++|+|||+|||+ .......|+.||+.+|.+|..
T Consensus 163 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 163 REGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCccHHHHHHHHHHHHHHHHh
Confidence 10 0 00110 12 37999999999999 777888899999999999864
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.62 E-value=1.9e-17 Score=168.21 Aligned_cols=96 Identities=18% Similarity=0.125 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecC--------CCcCCCCCCcccCCceeCC
Q 042564 243 EMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATG--------RAPNTKRLNLKAVGVEVDQ 314 (498)
Q Consensus 243 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G--------~~p~~~~l~l~~~gi~~~~ 314 (498)
.+...+...+++.| +++++++|++|..+++++.|++.+|+++.+|.||+|+| +.|+.+...++..+....
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~- 282 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHG- 282 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCC-
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCC-
Confidence 34455556566678 99999999999887778889999998899999999999 888887533332222222
Q ss_pred CCCeEcCCCCCCCCCCeEEecccCCC
Q 042564 315 TGAVKVDENSRTNVPSIWAVGDVTNR 340 (498)
Q Consensus 315 ~g~i~vd~~~~t~~~~iya~GD~~~~ 340 (498)
...++|+..++|+.+++|+.||+...
T Consensus 283 ~~~~kv~~~~~~~~~~i~~~~d~~~~ 308 (431)
T 3k7m_X 283 GQGLKILIHVRGAEAGIECVGDGIFP 308 (431)
T ss_dssp CCEEEEEEEEESCCTTEEEEBSSSSS
T ss_pred cceEEEEEEECCCCcCceEcCCCCEE
Confidence 23599999999999999999998543
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.58 E-value=8.3e-15 Score=152.30 Aligned_cols=170 Identities=17% Similarity=0.192 Sum_probs=99.5
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhc----
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARS---- 97 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~---- 97 (498)
.+|||||||||+||++||+.|++.|.+|+|||+ .+ ..+| +.+|.|+...+....+...+..+..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk------~~--~~iG----~~~Cnps~ggia~~~lv~ei~algg~~~~ 94 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTH------NI--DTLG----QMSCNPAIGGIGKGHLVKEVDALGGLMAK 94 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEES------CG--GGTT----CCSSSSEEESTTHHHHHHHHHHTTCSHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEee------cc--cccc----cccccccccchhhHHHHHHHHHhccHHHH
Confidence 469999999999999999999999999999994 11 1122 2345543211111111111111100
Q ss_pred ----CCccccc-----cc-------ccCHHHHHHHHHHHHHHHhHHHHHHHHh-CCcEEEEeEEEEE--eCCEE-EEEeC
Q 042564 98 ----YGWEVHE-----KI-------DFDWKKLLQKKTDEILRLNGIYKRLLSN-AGVKLYEGEGKIV--GPNEV-EVTQL 157 (498)
Q Consensus 98 ----~g~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~~~~i--~~~~~-~v~~~ 157 (498)
.+..+.. .+ .++. ..+...+...+++ .+++++.+.+..+ +++.+ .|.+.
T Consensus 95 ~~d~~gi~f~~l~~~kgpav~~~r~~~Dr-----------~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~ 163 (651)
T 3ces_A 95 AIDQAGIQFRILNASKGPAVRATRAQADR-----------VLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQ 163 (651)
T ss_dssp HHHHHEEEEEEESTTSCGGGCEEEEEECH-----------HHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEET
T ss_pred HhhhcccchhhhhcccCcccccchhhCCH-----------HHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEEC
Confidence 0010000 00 1111 1233444555666 5899987777766 44443 56666
Q ss_pred CCceEEEEcCeEEEcCCCCCCCCCCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEe
Q 042564 158 DGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLF 231 (498)
Q Consensus 158 ~g~~~~~~~d~liiAtG~~p~~p~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~ 231 (498)
+|. .+.+|.||+|||+.+..+.++|.... .+.+ +| |.++++++..|.++|.+|+.+.
T Consensus 164 dG~--~I~Ad~VVLATGt~s~~~~i~G~~~~-----------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 164 MGL--KFRAKAVVLTVGTFLDGKIHIGLDNY-----------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp TSE--EEEEEEEEECCSTTTCCEEECC----------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred CCC--EEECCEEEEcCCCCccCccccCcccC-----------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 664 79999999999998887777775421 1233 56 7889999999999999998875
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.48 E-value=1e-13 Score=143.67 Aligned_cols=171 Identities=22% Similarity=0.268 Sum_probs=101.7
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhh-----
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDAR----- 96 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~----- 96 (498)
.+|||+|||||+||+.||+.|++.|.+|+|||+ .+ ..+| ..+|.|+.-.+....+...+..+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk------~~--~~iG----~~~Cnps~GGia~g~lv~eldalgg~~~~ 93 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVL------NA--DTIG----QMSCNPAIGGIAKGIVVREIDALGGEMGK 93 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEES------CG--GGTT----CCCSCSEEECTTHHHHHHHHHHHTCSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEe------cc--cccC----CcCccccccccchHHHHHHHHHhhhHHHH
Confidence 469999999999999999999999999999994 11 1222 234544311000001111111110
Q ss_pred ---cCCccccc-----cc-------ccCHHHHHHHHHHHHHHHhHHHHHHHHh-CCcEEEEeEEEEE--eCCEE-EEEeC
Q 042564 97 ---SYGWEVHE-----KI-------DFDWKKLLQKKTDEILRLNGIYKRLLSN-AGVKLYEGEGKIV--GPNEV-EVTQL 157 (498)
Q Consensus 97 ---~~g~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~~~~i--~~~~~-~v~~~ 157 (498)
..++.+.. .+ ..+. ..+...+...+++ .+++++.+.+..+ +++.+ .|.+.
T Consensus 94 ~~d~~gi~f~~l~~~kGpav~~~r~~~Dr-----------~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~ 162 (637)
T 2zxi_A 94 AIDQTGIQFKMLNTRKGKAVQSPRAQADK-----------KRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTN 162 (637)
T ss_dssp HHHHHEEEEEEESTTSCGGGCEEEEEECH-----------HHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEET
T ss_pred HhhhcccceeecccccCccccchhhhCCH-----------HHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEEC
Confidence 00111000 00 1111 1233444555666 5899987777764 34544 46677
Q ss_pred CCceEEEEcCeEEEcCCCCCCCCCCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEee
Q 042564 158 DGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFR 232 (498)
Q Consensus 158 ~g~~~~~~~d~liiAtG~~p~~p~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~ 232 (498)
+|. .+.++.||+|||+.+..+.++|....- +.+ + |+.++++++..|.++|.++..+..
T Consensus 163 dG~--~i~AdaVVLATG~~s~~~~~~G~~~~~-----------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 163 LGV--EYKTKAVVVTTGTFLNGVIYIGDKMIP-----------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp TSC--EEECSEEEECCTTCBTCEEEETTEEEE-----------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred CCc--EEEeCEEEEccCCCccCceeccceecC-----------CCC---C-CchhHHHHHHHHHhcCCceEEecC
Confidence 765 899999999999988877666653210 112 2 356778999999999988766643
No 102
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.28 E-value=9.2e-12 Score=129.32 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=30.2
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.++||||||||+||++||+.|++ |.+|+|+||
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk 38 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSK 38 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECS
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEEC
Confidence 35899999999999999999999 999999995
No 103
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.26 E-value=1.5e-11 Score=117.23 Aligned_cols=159 Identities=17% Similarity=0.205 Sum_probs=111.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCcEEEEeeCCCCCCC--------------------------------------CCH
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM-GSTVDLLFRKELPLRG--------------------------------------FDD 242 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~-g~~V~lv~~~~~~l~~--------------------------------------~~~ 242 (498)
.+|+|||+|++|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999998654210 124
Q ss_pred HHHHHHHHHHHh-CCCEEEcCccEEEEEEeCCeE-EEEEC---------CC-----eEEEcCEEEEecCCCcCCCCCCcc
Q 042564 243 EMRAVVARNLEG-RGINLHPRTTIKELIKSEEGV-KVITD---------HG-----EEIVADVVLFATGRAPNTKRLNLK 306 (498)
Q Consensus 243 ~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~~-~v~~~---------~g-----~~i~~D~vi~a~G~~p~~~~l~l~ 306 (498)
++...+.+.+.+ .|+++++++.|.++..+++.+ .+.+. ++ .++.+|.||+|+|..++......+
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~ 199 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 199 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHH
Confidence 455566666765 699999999999998776653 34432 32 579999999999988876532111
Q ss_pred ---cCC--ceeCCCCCeEcCC-------CCCCCCCCeEEecccCCC-------CCChHHHHHHHHHHHHHHhC
Q 042564 307 ---AVG--VEVDQTGAVKVDE-------NSRTNVPSIWAVGDVTNR-------MNLTPVALMEGTCFAKTVFG 360 (498)
Q Consensus 307 ---~~g--i~~~~~g~i~vd~-------~~~t~~~~iya~GD~~~~-------~~~~~~A~~~g~~aa~~i~~ 360 (498)
..+ +.+.....+.++. ..+|+.|++|++||++.. .+.+..+..+|+.+|.++..
T Consensus 200 ~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 200 RLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 111 1111122343332 345678999999998731 23567888999999999864
No 104
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.22 E-value=4.9e-11 Score=125.35 Aligned_cols=32 Identities=38% Similarity=0.544 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHHhCC--CcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFG--AKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lvek 54 (498)
++||||||||+||+++|+.|++.| .+|+||||
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk 38 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISK 38 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeC
Confidence 489999999999999999999999 99999995
No 105
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.21 E-value=5.8e-10 Score=110.05 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe-EEEEECCC--eEEEcCEEEEecCCCc
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHG--EEIVADVVLFATGRAP 298 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g--~~i~~D~vi~a~G~~p 298 (498)
+..+.+.+.+.+++.|++++++++|+++..++++ +.|.+.+| .++.+|.||+|+|...
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 4578888899999999999999999999987665 77888887 4799999999999864
No 106
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.20 E-value=2.7e-12 Score=133.50 Aligned_cols=174 Identities=18% Similarity=0.165 Sum_probs=100.9
Q ss_pred cCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhc-
Q 042564 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARS- 97 (498)
Q Consensus 19 ~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~- 97 (498)
.+..+|||+|||||+||++||+.|++.|.+|+|+|+ .+ ..+|+ .+|.|+.-.+........+..+..
T Consensus 17 ~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk------~~--~~iG~----~~c~ps~gGia~~~lv~el~al~g~ 84 (641)
T 3cp8_A 17 RGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITS------DL--SAVAR----MSCNPAIGGVAKGQITREIDALGGE 84 (641)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEES------CG--GGTTC----CSSCSEEECHHHHHHHHHHHHHTCS
T ss_pred cccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEe------cc--cccCC----CccccchhhhhHHHHHHHHHhcccH
Confidence 344569999999999999999999999999999994 11 12332 345443211111111111111110
Q ss_pred -------CCccccc-----cc-------ccCHHHHHHHHHHHHHHHhHHHHHHHHh-CCcEEEEeEEEEE--eCCEEE-E
Q 042564 98 -------YGWEVHE-----KI-------DFDWKKLLQKKTDEILRLNGIYKRLLSN-AGVKLYEGEGKIV--GPNEVE-V 154 (498)
Q Consensus 98 -------~g~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~~~~~~~~~i--~~~~~~-v 154 (498)
.+..+.. .+ ..+.. .+...+...+++ .+++++.+.+..+ +.+.+. |
T Consensus 85 ~~~~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~-----------~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV 153 (641)
T 3cp8_A 85 MGKAIDATGIQFRMLNRSKGPAMHSPRAQADKT-----------QYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSV 153 (641)
T ss_dssp HHHHHHHHEEEEEEECSSSCTTTCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEE
T ss_pred HHHHHHhcCCchhhcccccCccccchhhhcCHH-----------HHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEE
Confidence 0111100 00 11211 223334455555 4899988777654 466665 7
Q ss_pred EeCCCceEEEEcCeEEEcCCCCCCCCCCCCCCcccChHHHhccccCCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEe
Q 042564 155 TQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLF 231 (498)
Q Consensus 155 ~~~~g~~~~~~~d~liiAtG~~p~~p~i~g~~~~~~~~~~~~l~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~ 231 (498)
.+.+|. .+.+|.||+|||+.+..+..+|.... . ..++ + |+.++++++..|.+.|.+|..+.
T Consensus 154 ~t~~G~--~i~Ad~VVLATG~~s~~~i~~G~~~~---------~--~g~~--v-G~~~a~~la~~L~~~G~kv~~l~ 214 (641)
T 3cp8_A 154 TVRSGR--AIQAKAAILACGTFLNGLIHIGMDHF---------P--GGRS--T-AEPPVEGLTESLASLGFSFGRLK 214 (641)
T ss_dssp EETTSC--EEEEEEEEECCTTCBTCEEEETTEEE---------E--CSSS--T-TSCCBCSHHHHHHHTTCCEEEEE
T ss_pred EECCCc--EEEeCEEEECcCCCCCccceeeeeee---------c--cccc--c-CCchhhhhHHHHHhCCceEEeec
Confidence 777765 89999999999998765443332211 0 0111 1 35678899999999999987654
No 107
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.19 E-value=2.1e-10 Score=121.35 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=31.4
Q ss_pred CCccEEEECCChhHHHHHHHHHhC------CCcEEEEccC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANF------GAKVGICELP 55 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lvek~ 55 (498)
.++||||||||+||++||+.|++. |.+|+||||.
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 468999999999999999999997 9999999963
No 108
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.13 E-value=5.8e-10 Score=111.83 Aligned_cols=57 Identities=21% Similarity=0.399 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
.++.+.+.+.+++.|++++++++|+++..+++++.|.+.+| ++.+|.||+|+|..+.
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCccC
Confidence 45667788888888999999999999998888888888888 7999999999998864
No 109
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.05 E-value=8.1e-10 Score=109.78 Aligned_cols=58 Identities=16% Similarity=0.180 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcC
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
+..+.+.+.+.+++.|++++++++|.++..+++++.|.+.+| ++.+|.||+|+|..+.
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHH
Confidence 467888888999999999999999999987776677777777 7999999999998653
No 110
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.03 E-value=1.3e-08 Score=100.96 Aligned_cols=57 Identities=25% Similarity=0.244 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEE-EEECCCeEEEcCEEEEecCCCc
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~D~vi~a~G~~p 298 (498)
...+.+.+.+.+++.|++++.+++|+++..+++.+. |.+.+| ++.+|.||+|+|..+
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 456778888889999999999999999988777665 777777 799999999999765
No 111
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.03 E-value=5.9e-09 Score=104.31 Aligned_cols=57 Identities=25% Similarity=0.301 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCCc
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
...+.+.+.+.+++.|++++++++|+++..+++. ..+.+.+| ++.+|.||+|+|...
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 3467888889999999999999999999877655 56777777 699999999999765
No 112
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.00 E-value=4.9e-09 Score=105.57 Aligned_cols=57 Identities=14% Similarity=0.230 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe--EEEEECCCe--EEEcCEEEEecCCCc
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEG--VKVITDHGE--EIVADVVLFATGRAP 298 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g~--~i~~D~vi~a~G~~p 298 (498)
..+.+.+.+.+++.|+++++++.|+++..++++ +.+.+.+|+ ++.+|.||.|+|..+
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 456677777788889999999999999887766 455567887 699999999999876
No 113
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.98 E-value=1.6e-08 Score=108.24 Aligned_cols=59 Identities=12% Similarity=0.191 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcC
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
...+...+.+.+++.|++++++++|+++..+++++.|.+.+|.++.+|.||+|+|....
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 36788888888999999999999999999888888888888888999999999998643
No 114
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.98 E-value=2.9e-08 Score=99.07 Aligned_cols=55 Identities=29% Similarity=0.379 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
..+...+.+.+++.|++++++++|+++..+++++.+.+.++ ++.+|.||+|+|..
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 45677788888889999999999999988877777777666 69999999999976
No 115
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.98 E-value=1.9e-09 Score=111.18 Aligned_cols=59 Identities=20% Similarity=0.246 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
..+.+.+.+.+++.|+++++++.|+++..+++. ..|++.+|+++.+|.||+|+|..+..
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARD 279 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 567788888899999999999999999887665 45888999999999999999998853
No 116
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.97 E-value=1.9e-09 Score=99.29 Aligned_cols=121 Identities=21% Similarity=0.280 Sum_probs=71.4
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
+|||+|||||++|+.+|..|++.|.+|+|||+ .. ...| . .|.|...-+....+...+.+ ..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~------~~--~~~G-~----~~~~~~~~~~~~~~~~~~~d--~~---- 63 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQ------SL--DAVM-M----PFLPPKPPFPPGSLLERAYD--PK---- 63 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEES------CG--GGTT-C----CSSCCCSCCCTTCHHHHHCC--TT----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEec------CC--CcCC-c----ccCccccccchhhHHhhhcc--CC----
Confidence 58999999999999999999999999999994 11 1223 1 12221000000000000000 00
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhC-CcEEEEeEEEEE--eCCEE-EEEeCCCceEEEEcCeEEEcCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIV--GPNEV-EVTQLDGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~~~~i--~~~~~-~v~~~~g~~~~~~~d~liiAtG~~p~ 178 (498)
.+ + ...+...+.+.+++. +++++...+..+ +.+.+ .|.+.+|. ++++|.||+|+|..+.
T Consensus 64 --g~--~-----------~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~--~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 64 --DE--R-----------VWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGP--PARGEKVVLAVGSFLG 126 (232)
T ss_dssp --CC--C-----------HHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSC--CEECSEEEECCTTCSS
T ss_pred --CC--C-----------HHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCC--EEECCEEEECCCCChh
Confidence 00 0 112334455566665 899886656554 34443 46666765 7999999999998654
Q ss_pred C
Q 042564 179 R 179 (498)
Q Consensus 179 ~ 179 (498)
.
T Consensus 127 ~ 127 (232)
T 2cul_A 127 A 127 (232)
T ss_dssp C
T ss_pred h
Confidence 3
No 117
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.97 E-value=1.2e-08 Score=109.19 Aligned_cols=59 Identities=12% Similarity=0.198 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCe-EEEcCEEEEecCCCcC
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGE-EIVADVVLFATGRAPN 299 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~-~i~~D~vi~a~G~~p~ 299 (498)
...+...+.+.+++.|++++++++|+++..+++++.|.+.+|+ ++.+|.||+|+|....
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 4678888888899999999999999999988878888888887 7999999999998743
No 118
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.96 E-value=3.3e-08 Score=98.27 Aligned_cols=72 Identities=19% Similarity=0.246 Sum_probs=55.5
Q ss_pred CcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcC
Q 042564 225 STVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 225 ~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
..+.++.+....+ .+..+.+.+.+.+++.|++++++++|+++..+++++.+.+.+| ++.+|.||+|+|..++
T Consensus 135 ~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 135 NYNAIFEPNSGVL--FSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp TEEEEEETTCEEE--EHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHH
T ss_pred CceEEEeCCCcEE--eHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHH
Confidence 3455555543322 2357888888999999999999999999988777777777666 6999999999998653
No 119
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.96 E-value=4.3e-09 Score=106.91 Aligned_cols=141 Identities=21% Similarity=0.302 Sum_probs=76.2
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCC-----CccccccccC-chhhHHHHHH---hH-----
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIG-----GVGGTCVIRG-CVPKKILVYG---AS----- 87 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~-----~~GG~~~~~g-~~p~~~l~~~---~~----- 87 (498)
+++||+|||||++|+++|+.|++.|.+|+|+|| .+..+ .-||.|.... +.+...+... ..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk------~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDK------GNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSA 98 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECS------SSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEEC------CCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHH
Confidence 358999999999999999999999999999995 21111 1123342221 1111111000 00
Q ss_pred -----hhHHHhhhhcCCcccccc---cccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEE--eCCE-EEEE
Q 042564 88 -----FGGELEDARSYGWEVHEK---IDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIV--GPNE-VEVT 155 (498)
Q Consensus 88 -----~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i--~~~~-~~v~ 155 (498)
..+.+..+..+|..+... ..+... .....+...+...+++.|++++.++ +..+ +.+. +.|.
T Consensus 99 ~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~-------~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~ 171 (447)
T 2i0z_A 99 FSIFNNEDIITFFENLGVKLKEEDHGRMFPVS-------NKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVI 171 (447)
T ss_dssp HHHSCHHHHHHHHHHTTCCEEECGGGEEEETT-------CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEE
T ss_pred HHhcCHHHHHHHHHhcCCceEEeeCCEEECCC-------CCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEE
Confidence 001111112222221100 000000 0011223344455666899998876 4443 4555 6777
Q ss_pred eCCCceEEEEcCeEEEcCCCCC
Q 042564 156 QLDGTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 156 ~~~g~~~~~~~d~liiAtG~~p 177 (498)
+.+|. .+++|.||+|||..+
T Consensus 172 ~~~G~--~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 172 LQTGE--VLETNHVVIAVGGKS 191 (447)
T ss_dssp ETTCC--EEECSCEEECCCCSS
T ss_pred ECCCC--EEECCEEEECCCCCc
Confidence 77764 699999999999766
No 120
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.95 E-value=3.4e-09 Score=93.46 Aligned_cols=109 Identities=22% Similarity=0.203 Sum_probs=69.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
||++|||||++|+.+|..|++.|.+|+|+|+. + ..+. .+.+ +..++.+ +
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~------~--~~~~-~~~~------------------~~~~~~~--~-- 50 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGG------R--SKVK-GVSR------------------VPNYPGL--L-- 50 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECS------C--CTTT-TCSC------------------CCCSTTC--T--
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCC------C--Cccc-Cchh------------------hhccCCC--c--
Confidence 79999999999999999999999999999941 1 0000 0000 0000000 0
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeEEEEEe--CCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVG--PNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~i~--~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
...... .+...+.+.+++.|++++.+.+..++ .+.+.+.+++| ++++|.||+|+|..|..
T Consensus 51 --~~~~~~-----------~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g---~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 51 --DEPSGE-----------ELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG---VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp --TCCCHH-----------HHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC---EEEEEEEEECCTTCCHH
T ss_pred --CCCCHH-----------HHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC---EEEECEEEECCCCCCCc
Confidence 001111 12233445566789999988655543 34567777665 78999999999998854
No 121
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.94 E-value=5.6e-09 Score=104.70 Aligned_cols=58 Identities=14% Similarity=0.198 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 301 (498)
..+.+.+.+.+.+ ++++++++|+++..+++++.+++.+|+++.+|.||.|.|..+...
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr 184 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSALR 184 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSSH
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHHH
Confidence 4566777777766 889999999999998888999999999999999999999876553
No 122
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.93 E-value=8.6e-09 Score=97.98 Aligned_cols=33 Identities=36% Similarity=0.453 Sum_probs=30.8
Q ss_pred CCccEEEECCChhHHHHHHHHHhC-CCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANF-GAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lvek 54 (498)
.++||+|||||++|+++|+.|++. |.+|+|+|+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk 71 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 71 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEES
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEEC
Confidence 358999999999999999999996 999999995
No 123
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.92 E-value=1.3e-08 Score=106.55 Aligned_cols=58 Identities=22% Similarity=0.354 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEe-CCeEEEEEC-CC--eEEEcCEEEEecCCCcC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKS-EEGVKVITD-HG--EEIVADVVLFATGRAPN 299 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~v~~~-~g--~~i~~D~vi~a~G~~p~ 299 (498)
..+.+.+.+.+++.|++++.++.|+++..+ ++...|.+. +| .++.+|.||.|+|..+.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCH
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcch
Confidence 456677888888899999999999999865 445777776 66 57999999999998663
No 124
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.91 E-value=1e-08 Score=102.21 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEE-EEE---CCCeEEEcCEEEEecCCCc
Q 042564 243 EMRAVVARNLEGRGINLHPRTTIKELIKSEEGVK-VIT---DHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 243 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-v~~---~~g~~i~~D~vi~a~G~~p 298 (498)
.+.+.+.+.+++.|++++.+++|+++..+++.+. |.+ .++.++.+|.||.|+|..+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 4667777888888999999999999988877655 665 3456899999999999876
No 125
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.90 E-value=4.6e-09 Score=110.13 Aligned_cols=32 Identities=38% Similarity=0.521 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
++||||||||+||++||+.|++.|.+|+|+||
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk 157 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEK 157 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 58999999999999999999999999999995
No 126
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.87 E-value=5.2e-08 Score=98.62 Aligned_cols=59 Identities=20% Similarity=0.302 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCc---cEEEEEEeCCeEE-EEECCCeEEEcCEEEEecCCCcC
Q 042564 241 DDEMRAVVARNLEGRGINLHPRT---TIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~---~v~~i~~~~~~~~-v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
...+...+.+.+++.|+++++++ +|++|..+++++. |.+.+|+++.+|.||+|+|....
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 35678888899999999999999 9999988877766 88999988999999999997643
No 127
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.85 E-value=6e-09 Score=107.15 Aligned_cols=137 Identities=18% Similarity=0.085 Sum_probs=77.8
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
...+||+|||||++|+++|..|++.|.+|+|||+ . ..+| .|...++.|...-... ..........|..
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk------~---~~~g-~~~~~~~~~~~~~~l~--~~g~~~~~~~~~~ 157 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEK------R---IKFS-RHNVLHLWPFTIHDLR--ALGAKKFYGRFCT 157 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES------C---SSCC-CCCEEECCHHHHHHHH--TTTHHHHCTTTTC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEe------c---cccC-CCCcccCChhHHHHHH--HcCCccccccccc
Confidence 3468999999999999999999999999999994 2 2222 3333334442211100 0000000111110
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC-----CEEEEEe--C-CCceEEEEcCeEEE
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP-----NEVEVTQ--L-DGTKLSYSAKHILI 171 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~-----~~~~v~~--~-~g~~~~~~~d~lii 171 (498)
. ....++. ..+...+.+.+.+.|++++.++ +..+.. +.+.|.. . +|+...+++|.||+
T Consensus 158 ~--~~~~~~~-----------~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~ 224 (497)
T 2bry_A 158 G--TLDHISI-----------RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLIS 224 (497)
T ss_dssp T--TCCEEEH-----------HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEE
T ss_pred c--ccccCCH-----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEE
Confidence 0 0001111 1223344455566799999886 555532 3455554 3 44224689999999
Q ss_pred cCCCCCCCCCC
Q 042564 172 ATGSRAQRAPI 182 (498)
Q Consensus 172 AtG~~p~~p~i 182 (498)
|+|..+.....
T Consensus 225 A~G~~S~~r~~ 235 (497)
T 2bry_A 225 AAGGKFVPEGF 235 (497)
T ss_dssp CCCTTCCCTTC
T ss_pred CCCCCcccccc
Confidence 99988766543
No 128
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.85 E-value=6.7e-08 Score=95.43 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCc
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
..+.+.+.+.+++.|++++.+++|+++..+++++.+.+.+|+ +.+|.||+|+|...
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccH
Confidence 467788888889999999999999999887777778887775 99999999999754
No 129
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.85 E-value=2.9e-08 Score=102.52 Aligned_cols=34 Identities=35% Similarity=0.436 Sum_probs=31.9
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
+.++||||||||+||++||+.|++.|.+|+||||
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk 72 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLER 72 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 3569999999999999999999999999999995
No 130
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.84 E-value=1.6e-09 Score=111.47 Aligned_cols=138 Identities=14% Similarity=0.107 Sum_probs=100.5
Q ss_pred EcCeEEEcCCCCCCCCCCCCCC--cc---cChHHHhcc--------------ccCCCeEEEEcCCHHHHHHHHHHHHCCC
Q 042564 165 SAKHILIATGSRAQRAPIPGQE--LA---ITSDEALSL--------------EELPKRAVVLGGGYIAVEFASIWRGMGS 225 (498)
Q Consensus 165 ~~d~liiAtG~~p~~p~i~g~~--~~---~~~~~~~~l--------------~~~~~~v~ViG~G~~g~e~a~~l~~~g~ 225 (498)
.||++++++|++|..+++.+.+ .+ ....+...+ .....+|+|||||+.|+.+|..|++.|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~ 116 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGA 116 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCC
Confidence 4678899999998776554321 11 122222222 1235699999999999999999999999
Q ss_pred cEEEEeeCCCCCCC-----CC----------------------------HHHHHHHHHHHHhCCCEEEcCccEEEEEEe-
Q 042564 226 TVDLLFRKELPLRG-----FD----------------------------DEMRAVVARNLEGRGINLHPRTTIKELIKS- 271 (498)
Q Consensus 226 ~V~lv~~~~~~l~~-----~~----------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~- 271 (498)
+|+++++.+.+... .+ .++.+.+.+.+++.|+++++++.|.++..+
T Consensus 117 ~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~ 196 (497)
T 2bry_A 117 RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPP 196 (497)
T ss_dssp EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCC
T ss_pred eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEec
Confidence 99999987653210 01 456677888888899999999999999864
Q ss_pred --CCeEEEEE--C-CC--eEEEcCEEEEecCCCcCCCC
Q 042564 272 --EEGVKVIT--D-HG--EEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 272 --~~~~~v~~--~-~g--~~i~~D~vi~a~G~~p~~~~ 302 (498)
++.+.|++ . +| +++.+|.||.|+|..+....
T Consensus 197 ~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 197 RKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp STTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTT
T ss_pred CCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccccc
Confidence 23456666 4 56 46899999999999987753
No 131
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.83 E-value=2.2e-09 Score=115.41 Aligned_cols=42 Identities=21% Similarity=0.321 Sum_probs=37.7
Q ss_pred CCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCC
Q 042564 255 RGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGR 296 (498)
Q Consensus 255 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 296 (498)
.|++|++++.|++|..+++++.|++.+|+++.+|.||+|+..
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 378999999999999888888899999989999999999963
No 132
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.81 E-value=2.4e-08 Score=99.24 Aligned_cols=57 Identities=16% Similarity=0.179 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEE-EE-CCC--eEEEcCEEEEecCCCcC
Q 042564 243 EMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKV-IT-DHG--EEIVADVVLFATGRAPN 299 (498)
Q Consensus 243 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v-~~-~~g--~~i~~D~vi~a~G~~p~ 299 (498)
.+.+.+.+...+.|+++++++.+..+..+++.+.. .. .++ .++.+|.||-|.|..+.
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccH
Confidence 45566777777889999999999999887776432 22 233 36889999999997654
No 133
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.81 E-value=3.2e-08 Score=103.53 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.++||||||||++|+++|+.|++.|.+|+||||
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk 152 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDK 152 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 468999999999999999999999999999995
No 134
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.81 E-value=4.7e-08 Score=96.81 Aligned_cols=57 Identities=18% Similarity=0.133 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCc
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
...+...+.+.+++.|++++++++|+++..+++++.|.+.+| ++.+|.||+|+|...
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 356788888999999999999999999998888888888777 799999999999754
No 135
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.80 E-value=2.4e-08 Score=103.22 Aligned_cols=33 Identities=45% Similarity=0.582 Sum_probs=31.1
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.++||+|||||++|+++|+.|++.|.+|+|+|+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~ 38 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLER 38 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEcc
Confidence 358999999999999999999999999999995
No 136
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.80 E-value=5e-09 Score=100.93 Aligned_cols=48 Identities=27% Similarity=0.403 Sum_probs=38.9
Q ss_pred CccEEEECCChhHHHHHHHHHhC--CCcEEEEccCCCCCCCCcCCCccccccccCchhh
Q 042564 23 DFDLFVIGAGSGGVRAARFSANF--GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPK 79 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~ 79 (498)
+|||+|||||++|+++|+.|++. |.+|+|+|+ ...+||.|...++.+.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk---------~~~~GGg~~~~g~~~~ 128 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEA---------GVAPGGGAWLGGQLFS 128 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEES---------SSSCCTTTTCCBTTCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeC---------CCccCCccccCCccch
Confidence 58999999999999999999996 999999995 3345666655555543
No 137
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.80 E-value=1.1e-07 Score=103.99 Aligned_cols=57 Identities=25% Similarity=0.280 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeE-EEEECCCeEEEcCEEEEecCCCc
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGV-KVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
+..+...+.+.+++.|++++++++|++|..+++.+ .|.+.+| ++.+|.||+|+|...
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 45788888999999999999999999998877664 5777777 799999999999754
No 138
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.79 E-value=8.2e-08 Score=98.95 Aligned_cols=58 Identities=7% Similarity=0.116 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeE-EEEECCCeEEEcCEEEEecCCCcC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGV-KVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
..+.+.+.+.+++.|++|+++++|++|..+++++ .|++++|+++.||.||.+++....
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHH
Confidence 5688889999999999999999999999888874 588999999999999998876543
No 139
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.77 E-value=5.5e-08 Score=96.46 Aligned_cols=32 Identities=28% Similarity=0.186 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.+||+|||||++|+++|+.|++.|.+|+|+|+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEec
Confidence 58999999999999999999999999999995
No 140
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.77 E-value=2e-08 Score=102.07 Aligned_cols=56 Identities=14% Similarity=0.198 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEE---------------eCCe-EEEEECCCeEE--EcCEEEEecCCCc
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIK---------------SEEG-VKVITDHGEEI--VADVVLFATGRAP 298 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---------------~~~~-~~v~~~~g~~i--~~D~vi~a~G~~p 298 (498)
..+.+.+.+.+++.|++++++++|+++.. ++++ ..|.+.+| ++ .+|.||+|+|...
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 47888899999999999999999999987 4444 35777777 58 9999999999754
No 141
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.76 E-value=1.3e-07 Score=95.18 Aligned_cols=59 Identities=14% Similarity=0.234 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEE-EEECCCeEEEcCEEEEecCCCcCCC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~D~vi~a~G~~p~~~ 301 (498)
..+.+.+.+.+++.|++++++++|++|..+++++. |.+ +|+++.+|.||+|+|......
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHH
Confidence 45777788889999999999999999998877754 655 477899999999999754433
No 142
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.75 E-value=2e-08 Score=101.07 Aligned_cols=58 Identities=19% Similarity=0.154 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
...+.+.+.+.+++.|++++++++|++|..+++++ | ..+|+++.+|.||+|+|.....
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHH
Confidence 46788999999999999999999999998777777 4 5677889999999999975443
No 143
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.73 E-value=1.7e-07 Score=91.76 Aligned_cols=96 Identities=22% Similarity=0.274 Sum_probs=81.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC---------------------CCCC--C---------HHHHHHHH
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP---------------------LRGF--D---------DEMRAVVA 249 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~---------------------l~~~--~---------~~~~~~l~ 249 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ ++.+ + .++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 37999999999999999999999999999987642 1111 0 57888888
Q ss_pred HHHHhCCCEEEcCccEEEEEEeCCeEE-EEECCCeEEEcCEEEEecCCCc
Q 042564 250 RNLEGRGINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 250 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~D~vi~a~G~~p 298 (498)
+.+++.|++++++++|.++..+++.+. |.+.+| ++.+|.||+|+|..+
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 889999999999999999998888877 888777 799999999999643
No 144
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.71 E-value=4.2e-08 Score=103.02 Aligned_cols=34 Identities=32% Similarity=0.452 Sum_probs=31.8
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
+.++||||||||+||++||+.|++.|.+|+|+||
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK 49 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTK 49 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEec
Confidence 3468999999999999999999999999999995
No 145
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.68 E-value=1.4e-08 Score=95.32 Aligned_cols=41 Identities=27% Similarity=0.435 Sum_probs=36.1
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
.+||+||||||||++||+.|++.|++|+|+|| ...+||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek---------~~~~GG~~~ 42 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK---------SRGSGGRMS 42 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC---------CCCCCCccc
Confidence 48999999999999999999999999999995 445677763
No 146
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.66 E-value=7.4e-08 Score=100.90 Aligned_cols=32 Identities=38% Similarity=0.560 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
++||||||||+||++||+.|++.|.+|+|+||
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK 38 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSK 38 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEec
Confidence 58999999999999999999999999999995
No 147
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.66 E-value=1.5e-07 Score=91.42 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
++||+|||||++|+++|+.|++.|.+|+|+|+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEEC
Confidence 37999999999999999999999999999995
No 148
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.65 E-value=2.9e-07 Score=96.24 Aligned_cols=32 Identities=38% Similarity=0.509 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.+||+|||||++|+++|+.|++.|.+|+|+|+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~ 157 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEK 157 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEec
Confidence 57999999999999999999999999999995
No 149
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.63 E-value=2.8e-07 Score=91.96 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=32.0
Q ss_pred CCCCCccccCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 11 LSQPNQEEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 11 ~~~~~~~~~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
...+++|..| ..+||+|||||++|+++|+.|++.|.+|+|+|+
T Consensus 15 ~~~~~~M~~~-~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 15 VPRGSHMNLL-SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp --------CC-TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ccCccccccc-CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 3344455443 358999999999999999999999999999995
No 150
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.63 E-value=4.4e-07 Score=94.55 Aligned_cols=58 Identities=16% Similarity=0.184 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhC-CCEEEcCccEEEEEEeCCe--EEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 242 DEMRAVVARNLEGR-GINLHPRTTIKELIKSEEG--VKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 242 ~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
..+.+.+.+.+++. ||+++++ +|+++..++++ ..|.+.+|+++.+|.||.|+|..+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 45778888888888 9999999 99999875544 67888889889999999999988765
No 151
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.62 E-value=2.5e-07 Score=96.15 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHh---CCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSAN---FGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~---~g~~V~lvek 54 (498)
..+||+|||||++|+++|+.|++ .|.+|+|||+
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~ 39 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIES 39 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 35899999999999999999999 9999999994
No 152
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.61 E-value=2.4e-07 Score=89.26 Aligned_cols=100 Identities=15% Similarity=0.115 Sum_probs=82.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC--CCC--------CCCC----CHHHHHHHHHHHHhCCCEEEcCccEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK--ELP--------LRGF----DDEMRAVVARNLEGRGINLHPRTTIKE 267 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~--~~~--------l~~~----~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 267 (498)
.+|+|||+|+.|+.+|..|.+.|.+|+++++. ..+ .+.+ ..++.+.+.+.+++.|++++. ..|.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999985 100 1222 256778888888889999999 89999
Q ss_pred EEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 268 LIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 268 i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
+..+++.+.+.+.+++++.+|.+|+|+|..|....
T Consensus 95 i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~ 129 (323)
T 3f8d_A 95 IENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLG 129 (323)
T ss_dssp EEEC--CEEEEESSSCEEEEEEEEECCCCEECCCC
T ss_pred EEecCCEEEEEECCCCEEEcCEEEECcCCCCccCC
Confidence 98877778888888889999999999999877653
No 153
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.61 E-value=3.3e-07 Score=95.99 Aligned_cols=33 Identities=27% Similarity=0.434 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHhC------CCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANF------GAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lvek 54 (498)
++|||+||||||||+++|+.|++. |.+|+|+||
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk 72 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEK 72 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECS
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeC
Confidence 358999999999999999999998 999999995
No 154
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.59 E-value=6.6e-07 Score=86.86 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=80.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC---------------CCC----CHHHHHHHHHHHHhCCCEEEcC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL---------------RGF----DDEMRAVVARNLEGRGINLHPR 262 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l---------------~~~----~~~~~~~l~~~l~~~Gv~i~~~ 262 (498)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++...+.+.+++.+++++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 579999999999999999999999999999876430 111 2567777888888889999999
Q ss_pred ccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCC
Q 042564 263 TTIKELIKSEEGVKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 263 ~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
+.|..+..+++.+.+.+.+|+++.+|.+|+|+|..
T Consensus 86 ~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred CEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 99999988776777888888889999999999984
No 155
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.57 E-value=3.7e-07 Score=91.05 Aligned_cols=32 Identities=28% Similarity=0.469 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
++||+|||||++|+++|+.|++.|.+|+|+|+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~ 37 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQ 37 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeC
Confidence 48999999999999999999999999999995
No 156
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.57 E-value=1.2e-07 Score=96.35 Aligned_cols=33 Identities=27% Similarity=0.478 Sum_probs=31.2
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.++||+||||||+|+++|+.|++.|.+|+|+|+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~ 37 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDS 37 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 358999999999999999999999999999995
No 157
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.57 E-value=2.4e-07 Score=89.76 Aligned_cols=100 Identities=14% Similarity=0.191 Sum_probs=83.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC---------------CCC----CHHHHHHHHHHHHhCCCEEEcC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL---------------RGF----DDEMRAVVARNLEGRGINLHPR 262 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l---------------~~~----~~~~~~~l~~~l~~~Gv~i~~~ 262 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 579999999999999999999999999999976321 111 3567788888888889999999
Q ss_pred ccEEEEEEeCC-eEEEEECCCeEEEcCEEEEecCC---CcCCCC
Q 042564 263 TTIKELIKSEE-GVKVITDHGEEIVADVVLFATGR---APNTKR 302 (498)
Q Consensus 263 ~~v~~i~~~~~-~~~v~~~~g~~i~~D~vi~a~G~---~p~~~~ 302 (498)
+.|.++..+++ .+.+.+.+|+ +.+|.+|+|+|. .|....
T Consensus 88 ~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~ 130 (332)
T 3lzw_A 88 QAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLE 130 (332)
T ss_dssp CCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCC
T ss_pred CEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCC
Confidence 99999988776 5788888886 999999999999 676543
No 158
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.57 E-value=1.8e-07 Score=91.39 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHHh---CCCcEEEEcc
Q 042564 24 FDLFVIGAGSGGVRAARFSAN---FGAKVGICEL 54 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~---~g~~V~lvek 54 (498)
+||+|||||++|+++|+.|++ .|.+|+|+||
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek 35 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDK 35 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEEC
Confidence 699999999999999999999 9999999995
No 159
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.57 E-value=6.2e-07 Score=85.26 Aligned_cols=100 Identities=19% Similarity=0.179 Sum_probs=81.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC---------CCC----CCHHHHHHHHHHHHhC-CCEEEcCccEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP---------LRG----FDDEMRAVVARNLEGR-GINLHPRTTIKE 267 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~---------l~~----~~~~~~~~l~~~l~~~-Gv~i~~~~~v~~ 267 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ++. ...++...+.+.+++. +++++.. +|..
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 47999999999999999999999999999974321 111 1246777788888876 7888755 8999
Q ss_pred EEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 268 LIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 268 i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
+..+++...+.+.+|+++.+|.+|+|+|..|....
T Consensus 82 i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~ 116 (297)
T 3fbs_A 82 AKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPE 116 (297)
T ss_dssp EEEETTEEEEEETTSCEEEEEEEEECCCCEEECCC
T ss_pred EEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCC
Confidence 98888788899999989999999999999887643
No 160
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.56 E-value=7.3e-07 Score=85.55 Aligned_cols=99 Identities=16% Similarity=0.226 Sum_probs=81.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCC-cEEEEeeCCC-----------CCCCC-----CHHHHHHHHHHHHhCCCEEEcCccE
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGS-TVDLLFRKEL-----------PLRGF-----DDEMRAVVARNLEGRGINLHPRTTI 265 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~-~V~lv~~~~~-----------~l~~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v 265 (498)
+|+|||+|+.|+.+|..|.+.|. +|+++++... ..+.+ ..++.+.+.+.+++.|++++. ..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999998531 01211 246777788888889999998 689
Q ss_pred EEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 266 KELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 266 ~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
..+..+++.+.+.+.+|+++.+|.+|+|+|..|....
T Consensus 82 ~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~ 118 (311)
T 2q0l_A 82 QRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTG 118 (311)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCC
T ss_pred EEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCC
Confidence 9998877777787888889999999999998886643
No 161
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.56 E-value=4e-07 Score=90.64 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
++||+|||||++|+++|+.|++.|.+|+|+|+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~ 33 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILER 33 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECS
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 47999999999999999999999999999994
No 162
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.55 E-value=1.1e-06 Score=93.04 Aligned_cols=32 Identities=34% Similarity=0.414 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
++||||||||+||++||+.|++.|.+|+||||
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK 36 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSL 36 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEec
Confidence 58999999999999999999999999999995
No 163
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.55 E-value=5.7e-07 Score=93.44 Aligned_cols=33 Identities=39% Similarity=0.659 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.++||+||||||+|+++|+.|++.|.+|+|||+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr 36 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVER 36 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 458999999999999999999999999999995
No 164
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.55 E-value=1.7e-07 Score=93.83 Aligned_cols=32 Identities=34% Similarity=0.538 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHHHHHHHHhC--CCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANF--GAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek 54 (498)
++||+|||||++|+++|+.|++. |.+|+|||+
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~ 69 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEE 69 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 48999999999999999999998 999999994
No 165
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.54 E-value=3.1e-07 Score=95.78 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=29.4
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
+++||+||||||+|+++|+.|++.|.+|+|||+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr 80 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEK 80 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcC
Confidence 358999999999999999999999999999995
No 166
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.53 E-value=5.2e-07 Score=94.05 Aligned_cols=58 Identities=19% Similarity=0.224 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe-EEEEECC---C--eEEEcCEEEEecCCCc
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDH---G--EEIVADVVLFATGRAP 298 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~---g--~~i~~D~vi~a~G~~p 298 (498)
+..+...+.+.+++.|++++++++|+++..++++ ..|.+.+ | ..+.+|.||.|+|...
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 4677888888889999999999999999988776 3455542 3 3689999999999754
No 167
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.52 E-value=2e-07 Score=95.85 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=32.6
Q ss_pred cCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 19 QTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 19 ~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.+++++||+||||||+|+++|+.|++.|.+|+|+|+
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~ 42 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLER 42 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 345568999999999999999999999999999995
No 168
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.52 E-value=1.2e-06 Score=85.98 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=81.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC-------C--------CCC----CHHHHHHHHHHHHhCCCEEEcC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP-------L--------RGF----DDEMRAVVARNLEGRGINLHPR 262 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~-------l--------~~~----~~~~~~~l~~~l~~~Gv~i~~~ 262 (498)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+ . +.+ ..++.+.+.+.+++.|++++++
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 94 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLN 94 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcC
Confidence 58999999999999999999999999999987542 1 111 1567777888888889999999
Q ss_pred ccEEEEEEeCC-eEEEEECCCeEEEcCEEEEecCCCc
Q 042564 263 TTIKELIKSEE-GVKVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 263 ~~v~~i~~~~~-~~~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
+.|..+..+++ .+.|.+.+|+++.+|.+|+|+|..+
T Consensus 95 ~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 95 ETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp CCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred CEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 99999987665 5778888888899999999999854
No 169
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.51 E-value=4.6e-07 Score=87.90 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=83.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC----CC------------CCCC-----CHHHHHHHHHHHHhCCCEE
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE----LP------------LRGF-----DDEMRAVVARNLEGRGINL 259 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~----~~------------l~~~-----~~~~~~~l~~~l~~~Gv~i 259 (498)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+ .+ ++.+ ..++...+.+.+++.|+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 4689999999999999999999999999999843 11 1122 3478888889999999999
Q ss_pred EcCccEEEEEEeCCeEEEEE---CCCeEEEcCEEEEecCCCcCCCC
Q 042564 260 HPRTTIKELIKSEEGVKVIT---DHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 260 ~~~~~v~~i~~~~~~~~v~~---~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
+.++ +.++..+++.+.+.+ .++..+.+|.+|+|+|.+|....
T Consensus 102 ~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~ 146 (338)
T 3itj_A 102 ITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMH 146 (338)
T ss_dssp ECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCC
T ss_pred EEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCC
Confidence 9997 999987777777777 36678999999999999887654
No 170
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.51 E-value=4.8e-07 Score=90.67 Aligned_cols=34 Identities=29% Similarity=0.396 Sum_probs=30.8
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCc-EEEEcc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAK-VGICEL 54 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~-V~lvek 54 (498)
+..+||+|||||++|+++|+.|++.|.+ |+|+|+
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~ 36 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLES 36 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEEC
Confidence 3458999999999999999999999999 999995
No 171
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.51 E-value=4.6e-07 Score=90.36 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.+||+|||||++|+++|+.|++.|.+|+|+|+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 57999999999999999999999999999995
No 172
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.46 E-value=1.2e-06 Score=86.71 Aligned_cols=97 Identities=19% Similarity=0.236 Sum_probs=80.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-----------------------------------------
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG----------------------------------------- 239 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~----------------------------------------- 239 (498)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 358999999999999999999999999999987654210
Q ss_pred ---CC-----------HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 240 ---FD-----------DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 240 ---~~-----------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
++ ..+.+.+.+.+++.|++++++++|.++.. ++ .|++.+|+++.+|.||.|+|..+..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHH
Confidence 00 34567778888888999999999999976 34 7888889899999999999988754
No 173
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.46 E-value=1.1e-06 Score=87.55 Aligned_cols=98 Identities=10% Similarity=0.157 Sum_probs=80.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC--------------C---C-------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL--------------R---G------------------------- 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l--------------~---~------------------------- 239 (498)
.+|+|||+|+.|+.+|..+++.|.+|+++++.+.+. . .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 369999999999999999999999999999876430 0 0
Q ss_pred ----------------------CCHHHHHHHHHHHHhCCCEEEcCccEEEEEEe----CCeEEEEECCCeEEEcCEEEEe
Q 042564 240 ----------------------FDDEMRAVVARNLEGRGINLHPRTTIKELIKS----EEGVKVITDHGEEIVADVVLFA 293 (498)
Q Consensus 240 ----------------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~----~~~~~v~~~~g~~i~~D~vi~a 293 (498)
...++.+.+.+.+++.||++++++.|+++..+ ++.+.|.+.++ ++.+|.||+|
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlA 163 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVA 163 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEEC
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEEC
Confidence 12445567788888899999999999999866 45577777776 7999999999
Q ss_pred cCCCcCC
Q 042564 294 TGRAPNT 300 (498)
Q Consensus 294 ~G~~p~~ 300 (498)
+|..+..
T Consensus 164 tG~~s~p 170 (401)
T 2gqf_A 164 TGGLSMP 170 (401)
T ss_dssp CCCSSCG
T ss_pred CCCccCC
Confidence 9998854
No 174
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.43 E-value=1.3e-06 Score=90.43 Aligned_cols=54 Identities=9% Similarity=0.089 Sum_probs=37.5
Q ss_pred HhHHHHHHHHh-CCcEEEEeEEEEEe--CC--EEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 124 LNGIYKRLLSN-AGVKLYEGEGKIVG--PN--EVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 124 ~~~~~~~~~~~-~gv~~~~~~~~~i~--~~--~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
+...+.+.+.+ .|++++.+++..+. .+ .+.|.+.+|. ++++|.||.|+|.....
T Consensus 177 l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~--~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 177 FSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNG--EISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSC--EEECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCC--EEEcCEEEECCCcchHH
Confidence 34445555666 79999998766553 22 2456666665 69999999999976554
No 175
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.43 E-value=8.7e-08 Score=91.78 Aligned_cols=33 Identities=39% Similarity=0.419 Sum_probs=30.6
Q ss_pred CCccEEEECCChhHHHHHHHHHhC--CCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANF--GAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek 54 (498)
.++||+|||||++|+++|+.|++. |.+|+|+|+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~ 98 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEec
Confidence 357999999999999999999997 999999995
No 176
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.42 E-value=2.4e-06 Score=90.44 Aligned_cols=35 Identities=34% Similarity=0.437 Sum_probs=31.7
Q ss_pred CCCccEEEECCChhHHHHHHHHH---h-CCCcEEEEccC
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSA---N-FGAKVGICELP 55 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~---~-~g~~V~lvek~ 55 (498)
..++||||||||+||++||+.|+ + .|.+|+||||.
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~ 58 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKA 58 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSS
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCc
Confidence 34689999999999999999999 6 89999999964
No 177
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.41 E-value=1.1e-06 Score=86.99 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=77.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC---CCCH---------HHHHHHHHHHHhCCCEEEcCccEEEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR---GFDD---------EMRAVVARNLEGRGINLHPRTTIKELI 269 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~---~~~~---------~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 269 (498)
-+|+|||+|+.|+.+|..|...+.+|+++++.+.+.- .+.. ++.....+.+++.||+++++++|.+|.
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id 89 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSID 89 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEE
Confidence 4799999999999999999778899999998775311 0111 111123466778899999999999997
Q ss_pred EeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 270 KSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 270 ~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
.+.. .|++++|+++.+|.+|+|||.+|....
T Consensus 90 ~~~~--~v~~~~g~~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 90 PNNK--LVTLKSGEKIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp TTTT--EEEETTSCEEECSEEEECCCEEECCCC
T ss_pred CCCC--EEEECCCCEEECCEEEEecCCCcCCCC
Confidence 6554 577889999999999999999887654
No 178
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.41 E-value=2.6e-06 Score=83.81 Aligned_cols=98 Identities=14% Similarity=0.221 Sum_probs=78.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC-cEEEEeeCC------C------CC-CC----------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGS-TVDLLFRKE------L------PL-RG---------------------------- 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~-~V~lv~~~~------~------~l-~~---------------------------- 239 (498)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ . ++ +.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 379999999999999999999999 999999874 0 00 00
Q ss_pred CC-HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 240 FD-DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 240 ~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
.. ..+...+.+.+++.|+++++++.|.++..+++...|.+.++ ++.+|.||+|+|..+..
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNFP 145 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTSB
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCcc
Confidence 01 34556667777888999999999999987766677887777 58999999999997653
No 179
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.41 E-value=1.9e-06 Score=83.33 Aligned_cols=99 Identities=18% Similarity=0.206 Sum_probs=79.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC-----------CCCCC-----CHHHHHHHHHHHHhCCCEEEcCccE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL-----------PLRGF-----DDEMRAVVARNLEGRGINLHPRTTI 265 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~-----------~l~~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v 265 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ..++.+.+.+.+++.|++++. ..+
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 4799999999999999999999999999998721 01222 246777788888889999988 588
Q ss_pred EEEEEe--CCe-EEEEECCCeEEEcCEEEEecCCCcCCC
Q 042564 266 KELIKS--EEG-VKVITDHGEEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 266 ~~i~~~--~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~ 301 (498)
.++..+ ++. +.+.+.+|+++.+|.+|+|+|..|...
T Consensus 88 ~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp EEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCC
T ss_pred EEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 888776 443 566777888899999999999987654
No 180
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.40 E-value=1.3e-06 Score=87.11 Aligned_cols=99 Identities=18% Similarity=0.202 Sum_probs=81.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC-------------------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR------------------------------------------- 238 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~------------------------------------------- 238 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998754300
Q ss_pred --C---------------CCHHHHHHHHHHHHhC-CCEEEcCccEEEEEEeCCeE--EEEECCCeEEEcCEEEEecCCCc
Q 042564 239 --G---------------FDDEMRAVVARNLEGR-GINLHPRTTIKELIKSEEGV--KVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 239 --~---------------~~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
. ....+.+.+.+.+++. |++++++++|+++..+++++ .+++.+|+++.+|.||.|+|..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 0 0124556677777777 99999999999998887777 88899998999999999999877
Q ss_pred CC
Q 042564 299 NT 300 (498)
Q Consensus 299 ~~ 300 (498)
..
T Consensus 167 ~v 168 (399)
T 2x3n_A 167 YV 168 (399)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 181
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.40 E-value=1.4e-06 Score=83.59 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=79.5
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC--CC--------CCC----CCHHHHHHHHHHHHhCCCEEEcCccEEEE
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE--LP--------LRG----FDDEMRAVVARNLEGRGINLHPRTTIKEL 268 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~--~~--------l~~----~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i 268 (498)
+|+|||+|+.|+.+|..|.+.|.+|+++++.. .. +.. ..+++.+.+.+.+++.|++++.++++..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999996531 00 011 12467778888888899999999999999
Q ss_pred EEeC---CeEEEEECCCeEEEcCEEEEecCCCcCCC
Q 042564 269 IKSE---EGVKVITDHGEEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 269 ~~~~---~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 301 (498)
..+. +...+.+++|+++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 7543 25778888888899999999999987654
No 182
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.40 E-value=6.5e-06 Score=84.62 Aligned_cols=32 Identities=38% Similarity=0.386 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
++||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~ 34 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEA 34 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEEC
Confidence 58999999999999999999999999999995
No 183
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.39 E-value=2.6e-06 Score=87.49 Aligned_cols=33 Identities=30% Similarity=0.291 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.++||+||||||+|+++|+.|++.|.+|+|+|+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~ 43 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQ 43 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 458999999999999999999999999999995
No 184
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.39 E-value=1.7e-06 Score=87.75 Aligned_cols=101 Identities=15% Similarity=0.160 Sum_probs=79.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCC--cEEEEeeCCCCC-----CC----------------------------------
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGS--TVDLLFRKELPL-----RG---------------------------------- 239 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~--~V~lv~~~~~~l-----~~---------------------------------- 239 (498)
..+|+|||+|+.|+.+|..|.+.|. +|+++++.+.+. ..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4689999999999999999999999 999999875320 00
Q ss_pred -------------C--------------CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECC---Ce---EEE
Q 042564 240 -------------F--------------DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDH---GE---EIV 286 (498)
Q Consensus 240 -------------~--------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~---g~---~i~ 286 (498)
+ ...+.+.+.+.+++.+..++++++|.++..+++...|++.+ |+ ++.
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~ 165 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDI 165 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEE
Confidence 0 02455666676766678899999999998887777777654 66 799
Q ss_pred cCEEEEecCC--CcCCC
Q 042564 287 ADVVLFATGR--APNTK 301 (498)
Q Consensus 287 ~D~vi~a~G~--~p~~~ 301 (498)
+|.||+|+|. .|+..
T Consensus 166 ~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 166 FDAVSICNGHYEVPYIP 182 (447)
T ss_dssp ESEEEECCCSSSSBCBC
T ss_pred eCEEEECCCCCCCCCCC
Confidence 9999999998 66554
No 185
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.39 E-value=1.1e-06 Score=85.09 Aligned_cols=99 Identities=22% Similarity=0.254 Sum_probs=79.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEee----CCCC------------CCCC-----CHHHHHHHHHHHHhCCCEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFR----KELP------------LRGF-----DDEMRAVVARNLEGRGINLH 260 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~----~~~~------------l~~~-----~~~~~~~l~~~l~~~Gv~i~ 260 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+ .+.+ ..++...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4799999999999999999999999999998 2111 1111 24677778888888999999
Q ss_pred cCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 261 PRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 261 ~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
.++ +..+..+++.+.+.+ +++++.+|.+|+|+|.+|....
T Consensus 89 ~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~ 128 (333)
T 1vdc_A 89 TET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLS 128 (333)
T ss_dssp CCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCC
T ss_pred EeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCC
Confidence 986 888877666677777 7788999999999999876643
No 186
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.38 E-value=1.6e-07 Score=97.08 Aligned_cols=53 Identities=11% Similarity=0.135 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGR 296 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 296 (498)
..+.+.+.+.+.+.|++++++++|++|..+++ .+++.+|+++.+|.||.++..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~--~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNK--TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTT--EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCC--EEEEcCCCEEECCEEEECCCH
Confidence 45677777888888999999999999976655 466889999999999998764
No 187
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.37 E-value=3e-06 Score=89.78 Aligned_cols=38 Identities=24% Similarity=0.336 Sum_probs=33.6
Q ss_pred cccCCCCccEEEECCChhHHHHHHHHHh-CCCcEEEEcc
Q 042564 17 EEQTHFDFDLFVIGAGSGGVRAARFSAN-FGAKVGICEL 54 (498)
Q Consensus 17 ~~~~~~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lvek 54 (498)
|..|..++||+||||||+|+++|+.|++ .|.+|+||||
T Consensus 26 m~~~~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr 64 (639)
T 2dkh_A 26 TEAVPSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQ 64 (639)
T ss_dssp CSSCCSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECS
T ss_pred cCCCCCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeC
Confidence 3344456899999999999999999999 9999999995
No 188
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.37 E-value=2.3e-06 Score=85.27 Aligned_cols=100 Identities=25% Similarity=0.297 Sum_probs=77.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC------CCHHHHHHH--------------------------
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG------FDDEMRAVV-------------------------- 248 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~------~~~~~~~~l-------------------------- 248 (498)
+.+|+|||+|+.|+.+|..|++.|.+|+++++.+..... +.+...+.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 458999999999999999999999999999987653211 233222221
Q ss_pred -----------------HHHHHh--CCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 249 -----------------ARNLEG--RGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 249 -----------------~~~l~~--~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
.+.|.+ .|++++++++|.++..+++++.+++.+|+++.+|.||.|.|..+..
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhH
Confidence 122222 3789999999999998888888999999899999999999987653
No 189
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.37 E-value=3.5e-06 Score=87.26 Aligned_cols=100 Identities=24% Similarity=0.257 Sum_probs=81.8
Q ss_pred CeEEEEcCCHHHHHHHHHHH-HCCCcEEEEeeCCCCC--------CC-------------C----------------CHH
Q 042564 202 KRAVVLGGGYIAVEFASIWR-GMGSTVDLLFRKELPL--------RG-------------F----------------DDE 243 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~-~~g~~V~lv~~~~~~l--------~~-------------~----------------~~~ 243 (498)
.+|+|||+|+.|+.+|..|+ +.|.+|+++++.+.+. +. + .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 37999999999999999999 9999999999965321 00 1 235
Q ss_pred HHHHHHHHHHhCCC--EEEcCccEEEEEEeCC--eEEEEECCCeEEEcCEEEEecCC--CcCCC
Q 042564 244 MRAVVARNLEGRGI--NLHPRTTIKELIKSEE--GVKVITDHGEEIVADVVLFATGR--APNTK 301 (498)
Q Consensus 244 ~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~D~vi~a~G~--~p~~~ 301 (498)
+.+.+.+.+++.|+ .+++++.|.++..+++ ...|++.+|+++.+|.||+|+|. .|...
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCC
Confidence 77778888888898 8999999999987766 57888999999999999999994 55543
No 190
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.37 E-value=1.8e-06 Score=89.55 Aligned_cols=100 Identities=24% Similarity=0.286 Sum_probs=81.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC---------------C------CC----------------CHHH
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL---------------R------GF----------------DDEM 244 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l---------------~------~~----------------~~~~ 244 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .+ .+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 479999999999999999999999999999865321 0 01 1467
Q ss_pred HHHHHHHHHhCCC--EEEcCccEEEEEEeCC--eEEEEECCCeEEEcCEEEEecC--CCcCCC
Q 042564 245 RAVVARNLEGRGI--NLHPRTTIKELIKSEE--GVKVITDHGEEIVADVVLFATG--RAPNTK 301 (498)
Q Consensus 245 ~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~D~vi~a~G--~~p~~~ 301 (498)
.+.+.+.+++.|+ .++++++|.++..+++ ...|++.+|+++.+|.||+|+| ..|...
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 7778888888888 8999999999987665 5788899999999999999999 555544
No 191
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.36 E-value=3.3e-07 Score=93.11 Aligned_cols=57 Identities=21% Similarity=0.095 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEe--CCeE-EEEECCCeEEEcCEEEEecCCCcC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKS--EEGV-KVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~-~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
..+.+.+.+.+++.|++++++++|++|..+ ++++ .|.+ +|+++.||.||+++|..|.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 468888999999999999999999999887 5553 4555 5788999999999998765
No 192
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.36 E-value=4.5e-07 Score=91.65 Aligned_cols=98 Identities=17% Similarity=0.254 Sum_probs=77.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHH---CCCcEEEEeeCCCCC--C---------CCCHHHHHHHHHHHHhCCCEEEcCccEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRG---MGSTVDLLFRKELPL--R---------GFDDEMRAVVARNLEGRGINLHPRTTIKE 267 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~---~g~~V~lv~~~~~~l--~---------~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 267 (498)
++|+|||||+.|+.+|..|++ .|.+|+++++.+... + ....++...+.+.+++.||+++. ..+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 799999999987531 1 01223334456778889999985 58999
Q ss_pred EEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 268 LIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 268 i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
+..+++ .|++.+|+++.+|.+|+|+|.+|+...
T Consensus 84 id~~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDAEAQ--NITLADGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EETTTT--EEEETTSCEEECSEEEECCCCEECGGG
T ss_pred EEcCCC--EEEECCCCEEECCEEEECCCCCcCccc
Confidence 876544 577888888999999999999988654
No 193
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.36 E-value=2.9e-07 Score=91.85 Aligned_cols=47 Identities=30% Similarity=0.379 Sum_probs=39.9
Q ss_pred ccCCCCccEEEECCChhHHHHHHHHHhC-CCcEEEEccCCCCCCCCcCCCccccccc
Q 042564 18 EQTHFDFDLFVIGAGSGGVRAARFSANF-GAKVGICELPFHPISSEVIGGVGGTCVI 73 (498)
Q Consensus 18 ~~~~~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lvek~~~~~~~~~~~~~GG~~~~ 73 (498)
.+|+.++||+|||||++|++||..|++. |.+|+|+|+ ...+||.|..
T Consensus 2 ~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~---------~~~~GG~~~~ 49 (399)
T 1v0j_A 2 QPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLER---------RPHIGGNAYS 49 (399)
T ss_dssp --CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECS---------SSSSSGGGCE
T ss_pred CcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeC---------CCCCCCeeee
Confidence 3455679999999999999999999998 999999995 5678998854
No 194
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.35 E-value=4.7e-06 Score=80.76 Aligned_cols=98 Identities=16% Similarity=0.236 Sum_probs=75.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC--------------------CCCCCHHHHHHHHH-----------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP--------------------LRGFDDEMRAVVAR----------- 250 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~--------------------l~~~~~~~~~~l~~----------- 250 (498)
.+|+|||+|++|+.+|..|++.|.+|+++++.+.+ +....+.+.+.+.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 47999999999999999999999999999987632 11122333333222
Q ss_pred --------------------------------HHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEE-cCEEEEecCCC
Q 042564 251 --------------------------------NLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIV-ADVVLFATGRA 297 (498)
Q Consensus 251 --------------------------------~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~-~D~vi~a~G~~ 297 (498)
.+. .|++++++++|+++..+++++.|++.+|+.+. +|.||.|+|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~ 161 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAP 161 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHH
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHH
Confidence 222 28899999999999988888889999998764 99999999965
Q ss_pred cCC
Q 042564 298 PNT 300 (498)
Q Consensus 298 p~~ 300 (498)
...
T Consensus 162 ~~~ 164 (336)
T 1yvv_A 162 QAS 164 (336)
T ss_dssp HHG
T ss_pred HHH
Confidence 443
No 195
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.34 E-value=3.1e-06 Score=86.09 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=78.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHH---CCCc---EEEEeeCCCCC-------------------------------------C
Q 042564 202 KRAVVLGGGYIAVEFASIWRG---MGST---VDLLFRKELPL-------------------------------------R 238 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~---~g~~---V~lv~~~~~~l-------------------------------------~ 238 (498)
++|+|||+|+.|+.+|..|.+ .|.+ |+++++.+.+. +
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 9999 99999875421 0
Q ss_pred CC---------------CHHHHHHHHHHHHhCCCE--EEcCccEEEEEEeCC--eEEEEECC---C--eEEEcCEEEEec
Q 042564 239 GF---------------DDEMRAVVARNLEGRGIN--LHPRTTIKELIKSEE--GVKVITDH---G--EEIVADVVLFAT 294 (498)
Q Consensus 239 ~~---------------~~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~--~~~v~~~~---g--~~i~~D~vi~a~ 294 (498)
.+ ..++.+.+.+.+++.|++ +++++.|..+...++ ...|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 134666677777778998 999999999987765 55666543 4 468999999999
Q ss_pred C--CCcCCCC
Q 042564 295 G--RAPNTKR 302 (498)
Q Consensus 295 G--~~p~~~~ 302 (498)
| ..|+...
T Consensus 163 G~~s~p~~p~ 172 (464)
T 2xve_A 163 GHFSTPYVPE 172 (464)
T ss_dssp CSSSSBCCCC
T ss_pred CCCCCCccCC
Confidence 9 6776543
No 196
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.34 E-value=4e-06 Score=80.69 Aligned_cols=99 Identities=18% Similarity=0.231 Sum_probs=79.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC-----------CCCCC----CHHHHHHHHHHHHhCCCEEEcCccEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL-----------PLRGF----DDEMRAVVARNLEGRGINLHPRTTIK 266 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~-----------~l~~~----~~~~~~~l~~~l~~~Gv~i~~~~~v~ 266 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ..++.+.+.+.+++.|++++. ..+.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 4799999999999999999999999999998531 01211 246677788888888999988 6899
Q ss_pred EEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 267 ELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 267 ~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
.+..+++.+.+.+ +++++.+|.+|+|+|..|....
T Consensus 96 ~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~ 130 (319)
T 3cty_A 96 SIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLG 130 (319)
T ss_dssp EEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCC
T ss_pred EEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCC
Confidence 9987777666766 5567999999999998876543
No 197
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.33 E-value=4.6e-06 Score=79.77 Aligned_cols=100 Identities=15% Similarity=0.162 Sum_probs=72.9
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC----------CC--CC-CCHHHHHHHHHHHHhCCCEEEcCccEEEEE
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL----------PL--RG-FDDEMRAVVARNLEGRGINLHPRTTIKELI 269 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~----------~l--~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 269 (498)
.|+|||+|+.|+.+|..+++.|.+|+++++... +. +. ..+++.+...+.+.+.+...+.+..+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 699999999999999999999999999997531 01 01 224555655566666544444444555555
Q ss_pred EeCC-eEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 270 KSEE-GVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 270 ~~~~-~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
..++ ...+.+.+|+++.+|.+|+|||.+|....
T Consensus 88 ~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~ 121 (304)
T 4fk1_A 88 KQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPS 121 (304)
T ss_dssp ECTTSCEEEEETTCCEEEEEEEEECCCCEEECCS
T ss_pred ecCCCcEEEEECCCCEEEeCEEEEccCCcccccc
Confidence 4443 47888999999999999999999887654
No 198
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.33 E-value=3.4e-06 Score=80.84 Aligned_cols=98 Identities=13% Similarity=0.121 Sum_probs=77.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEE-EeeCCC--------C---CCCCC-----HHHHHHHHHHHHhCCCEEEcCcc
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDL-LFRKEL--------P---LRGFD-----DEMRAVVARNLEGRGINLHPRTT 264 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l-v~~~~~--------~---l~~~~-----~~~~~~l~~~l~~~Gv~i~~~~~ 264 (498)
.+|+|||+|+.|+.+|..|++.|.+|++ +++... . .+.++ .++...+.+.+++.|++++.+ +
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 83 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV-G 83 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-C
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-E
Confidence 5899999999999999999999999999 887321 0 12223 578888888899999999998 8
Q ss_pred EEEEEEeC--CeEEEEE-CCCeEEEcCEEEEecCCCcCCCC
Q 042564 265 IKELIKSE--EGVKVIT-DHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 265 v~~i~~~~--~~~~v~~-~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
+.++ .++ +.+.+.+ .++ ++.+|.+|+|+|..|....
T Consensus 84 v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~ 122 (315)
T 3r9u_A 84 VEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAG 122 (315)
T ss_dssp EEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCC
T ss_pred EEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCC
Confidence 8888 666 5566423 334 8999999999999887653
No 199
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.32 E-value=5.2e-06 Score=84.07 Aligned_cols=98 Identities=21% Similarity=0.252 Sum_probs=80.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC-------------------C------------------C----
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR-------------------G------------------F---- 240 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~-------------------~------------------~---- 240 (498)
.+|+|||+|..|+.+|..+++.|.+|+++++.+.+.. . +
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 4799999999999999999999999999998763210 0 0
Q ss_pred --------------------------CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEe
Q 042564 241 --------------------------DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFA 293 (498)
Q Consensus 241 --------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a 293 (498)
...+.+.+.+.+++.||+++++++|+++..+++. +.|.+.+|+++.+|.||+|
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlA 186 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIA 186 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEEC
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEEC
Confidence 1344556777788899999999999999877666 7788888878999999999
Q ss_pred cCCCcC
Q 042564 294 TGRAPN 299 (498)
Q Consensus 294 ~G~~p~ 299 (498)
+|..+.
T Consensus 187 tGg~s~ 192 (447)
T 2i0z_A 187 VGGKSV 192 (447)
T ss_dssp CCCSSS
T ss_pred CCCCcC
Confidence 998773
No 200
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.29 E-value=3.2e-06 Score=81.34 Aligned_cols=99 Identities=13% Similarity=0.088 Sum_probs=79.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC-----------CCCCC-----CHHHHHHHHHHHHhCCCEEEcCccE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL-----------PLRGF-----DDEMRAVVARNLEGRGINLHPRTTI 265 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~-----------~l~~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v 265 (498)
.+|+|||+|+.|+.+|..|.+.|.+|+++++... .++.+ .+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 4799999999999999999999999999986421 01111 24677778888889999999985 8
Q ss_pred EEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 266 KELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 266 ~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
..+..+++.+.+ +.+++.+.+|.+|+|+|.+|....
T Consensus 85 ~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~~~ 120 (320)
T 1trb_A 85 NKVDLQNRPFRL-NGDNGEYTCDALIIATGASARYLG 120 (320)
T ss_dssp EEEECSSSSEEE-EESSCEEEEEEEEECCCEEECCCC
T ss_pred eEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCCCC
Confidence 888766666666 667788999999999999887653
No 201
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.29 E-value=4.8e-06 Score=85.87 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=30.4
Q ss_pred CccEEEECCChhHHHHHHHHHh---CCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSAN---FGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~---~g~~V~lvek 54 (498)
.+||||||||++|+++|+.|++ .|.+|+|||+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~ 36 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVES 36 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEec
Confidence 3799999999999999999999 9999999995
No 202
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.28 E-value=1.6e-06 Score=84.04 Aligned_cols=53 Identities=21% Similarity=0.178 Sum_probs=38.3
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhh
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPK 79 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~ 79 (498)
+||+|||||+||+.||+.|++.|.+|+|+|+..... ......+.+.+.-|.|+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~---tp~h~~d~i~eL~CnpS 54 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM---TPAHGTDRFAEIVCSNS 54 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC---CSSCCSSCTTCCCSCCE
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC---CccccCCCccccccCcC
Confidence 699999999999999999999999999999421100 11122345556666554
No 203
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.27 E-value=4.8e-06 Score=80.84 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=79.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC-----------CCCCC-----CHHHHHHHHHHHHhCCCEEEcCcc
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL-----------PLRGF-----DDEMRAVVARNLEGRGINLHPRTT 264 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~-----------~l~~~-----~~~~~~~l~~~l~~~Gv~i~~~~~ 264 (498)
..+|+|||+|+.|+.+|..|.+.|.+|+++++... .++.+ .+++.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 35899999999999999999999999999986321 01112 25677778888888999999986
Q ss_pred EEEEEEeCCeEEE-EECCCeEEEcCEEEEecCCCcCCCC
Q 042564 265 IKELIKSEEGVKV-ITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 265 v~~i~~~~~~~~v-~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
+..+.. ++...+ .+.+|+++.+|.+|+|+|..|....
T Consensus 93 v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~ 130 (335)
T 2a87_A 93 VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARYLQ 130 (335)
T ss_dssp EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECCCC
T ss_pred EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccCCC
Confidence 888876 444566 7778888999999999999887643
No 204
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.26 E-value=6.4e-06 Score=85.64 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
++||+||||||+|+++|+.|++.|.+|+|+||
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr 57 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQ 57 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 58999999999999999999999999999995
No 205
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.25 E-value=5.2e-06 Score=86.06 Aligned_cols=100 Identities=22% Similarity=0.148 Sum_probs=79.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC----------------------------------CC---CCHHH
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL----------------------------------RG---FDDEM 244 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l----------------------------------~~---~~~~~ 244 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ..+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 479999999999999999999999999999975320 00 12567
Q ss_pred HHHHHHHHHhCCC--EEEcCccEEEEEEeCC--eEEEEECCCeEEEcCEEEEecC--CCcCCC
Q 042564 245 RAVVARNLEGRGI--NLHPRTTIKELIKSEE--GVKVITDHGEEIVADVVLFATG--RAPNTK 301 (498)
Q Consensus 245 ~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~D~vi~a~G--~~p~~~ 301 (498)
...+.+.+++.|+ .++++++|.++..+++ ...|++.+|+++.+|.||+|+| ..|...
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---C
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCC
Confidence 7777787888787 7899999999976554 4788899999999999999999 566554
No 206
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.24 E-value=6.5e-06 Score=78.92 Aligned_cols=99 Identities=21% Similarity=0.257 Sum_probs=78.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC----C------------CCCC-----CHHHHHHHHHHHHhCCCEEEc
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL----P------------LRGF-----DDEMRAVVARNLEGRGINLHP 261 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~----~------------l~~~-----~~~~~~~l~~~l~~~Gv~i~~ 261 (498)
.|+|||+|+.|+.+|..++++|.+|+++++... + ++.+ .+++...+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 699999999999999999999999999987541 0 0111 256777888888899999876
Q ss_pred CccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 262 RTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 262 ~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
. .+..+....+...+.+.++.++.+|.+|+|||.+|....
T Consensus 86 ~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ 125 (314)
T 4a5l_A 86 E-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMH 125 (314)
T ss_dssp C-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCC
T ss_pred e-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccC
Confidence 6 566665566667778888889999999999999887654
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.24 E-value=2.2e-06 Score=86.32 Aligned_cols=100 Identities=20% Similarity=0.298 Sum_probs=75.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCC--cEEEEeeCCCCCC-------CC------CHHHHHHHHHHHHhCCCEEEcCccE
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGS--TVDLLFRKELPLR-------GF------DDEMRAVVARNLEGRGINLHPRTTI 265 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~--~V~lv~~~~~~l~-------~~------~~~~~~~l~~~l~~~Gv~i~~~~~v 265 (498)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+.- .+ ...+.....+.+++.|++++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 3689999999999999999999998 7999998654210 00 0111111235667889999999999
Q ss_pred EEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 266 KELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 266 ~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
..+..++. .|.+.+|+++.+|.+|+|+|.+|....
T Consensus 84 ~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINRDRQ--QVILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEETTTT--EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred EEEECCCC--EEEECCCCEEECCEEEEcCCCCccCCC
Confidence 99976544 567788888999999999999987654
No 208
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.23 E-value=5.6e-06 Score=85.50 Aligned_cols=101 Identities=13% Similarity=0.146 Sum_probs=81.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC--CCC-----------CC-CCHHHHHHHHHHHHhCCCEEEcCccEE
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE--LPL-----------RG-FDDEMRAVVARNLEGRGINLHPRTTIK 266 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~--~~l-----------~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 266 (498)
..+|+|||+|+.|+.+|..+++.|.+|+++++.. ... +. ..+++...+.+.+++.|++++.+++|.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 3589999999999999999999999999997531 000 01 235677888888889999999999999
Q ss_pred EEEEeC---CeEEEEECCCeEEEcCEEEEecCCCcCCC
Q 042564 267 ELIKSE---EGVKVITDHGEEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 267 ~i~~~~---~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 301 (498)
.+..+. +...|.+.+|+++.+|.+|+|+|.+|...
T Consensus 292 ~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 292 KLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNM 329 (521)
T ss_dssp EEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCC
Confidence 997542 25778888898999999999999877653
No 209
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.22 E-value=1.1e-06 Score=88.65 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=41.0
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHH
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILV 83 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~ 83 (498)
++||+||||||+|+++|+.|++.|.+|+|+|+ .+.....+|.|...+|.+.+.+.
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~------~~~~~~~~g~~~~~~~~~~~~~~ 76 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTD------RKPDEYSGLRLLNTVAHNAVTVQ 76 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEES------CCGGGSTTSCCCCCCCBCHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcC------CChHhhcccccccchhccchhhh
Confidence 37999999999999999999999999999994 22112234566666676655543
No 210
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.22 E-value=1.5e-06 Score=87.08 Aligned_cols=98 Identities=20% Similarity=0.290 Sum_probs=74.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHH---CCCcEEEEeeCCCCC-----C----C--CCHHHHHHHHHHHHhCCCEEEcCccEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRG---MGSTVDLLFRKELPL-----R----G--FDDEMRAVVARNLEGRGINLHPRTTIKE 267 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~---~g~~V~lv~~~~~~l-----~----~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 267 (498)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. + . ...++...+.+.+++.|++++.+ .|..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 899999999887421 1 0 12233444667777889999988 8888
Q ss_pred EEEeCCeEEEEECCCe----EEEcCEEEEecCCCcCCCC
Q 042564 268 LIKSEEGVKVITDHGE----EIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 268 i~~~~~~~~v~~~~g~----~i~~D~vi~a~G~~p~~~~ 302 (498)
+..+++. |++.+++ ++.+|.+|+|+|.+|+...
T Consensus 81 i~~~~~~--V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ 117 (409)
T 3h8l_A 81 IDAKSSM--VYYTKPDGSMAEEEYDYVIVGIGAHLATEL 117 (409)
T ss_dssp EETTTTE--EEEECTTSCEEEEECSEEEECCCCEECGGG
T ss_pred EeCCCCE--EEEccCCcccceeeCCEEEECCCCCcCccC
Confidence 8765554 4444443 4899999999999988653
No 211
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.20 E-value=7.7e-07 Score=89.74 Aligned_cols=97 Identities=21% Similarity=0.180 Sum_probs=74.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHH--CCCcEEEEeeCCCCCCC-----------CCHHHHHHHHHHHHhCCCEEEcCccEEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRG--MGSTVDLLFRKELPLRG-----------FDDEMRAVVARNLEGRGINLHPRTTIKEL 268 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~--~g~~V~lv~~~~~~l~~-----------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i 268 (498)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+... ...++...+.+.+++.|++++.+ .+..+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 689999999999999999999 78899999998753210 01112222345566789999975 88888
Q ss_pred EEeCCeEEEEECCCeEEEcCEEEEecCCCcCCC
Q 042564 269 IKSEEGVKVITDHGEEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 269 ~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 301 (498)
..+.+ .+.+.+++++.+|.+|+|+|.+|+..
T Consensus 82 d~~~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPDAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETTTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred ECCCC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 65544 57778888899999999999998765
No 212
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.20 E-value=4.9e-06 Score=84.29 Aligned_cols=99 Identities=24% Similarity=0.325 Sum_probs=71.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC------CCC------CHHHHHHHHHHH-HhCCCEEEcCccEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPL------RGF------DDEMRAVVARNL-EGRGINLHPRTTIK 266 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l------~~~------~~~~~~~l~~~l-~~~Gv~i~~~~~v~ 266 (498)
++|+|||+|+.|+.+|..|++. +.+|+++++.+.+. +.+ ..++.....+.+ ++.|+++++++++.
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~ 83 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEVI 83 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEEE
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEEE
Confidence 6899999999999999999988 78999999987431 110 111222222334 67899999999999
Q ss_pred EEEEeCCeEEEEECCC-eEEEcCEEEEecCCCcCCCC
Q 042564 267 ELIKSEEGVKVITDHG-EEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 267 ~i~~~~~~~~v~~~~g-~~i~~D~vi~a~G~~p~~~~ 302 (498)
.+. .+...+.+.++ .++.+|.+|+|||.+|....
T Consensus 84 ~i~--~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~ 118 (449)
T 3kd9_A 84 EVD--TGYVRVRENGGEKSYEWDYLVFANGASPQVPA 118 (449)
T ss_dssp EEC--SSEEEEECSSSEEEEECSEEEECCCEEECCCS
T ss_pred EEe--cCCCEEEECCceEEEEcCEEEECCCCCCCCCC
Confidence 884 33456677777 47999999999999887643
No 213
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.20 E-value=5.7e-06 Score=82.75 Aligned_cols=99 Identities=17% Similarity=0.204 Sum_probs=75.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCc--EEEEeeCCCCCCC---CCHHHH---------HHHHHHHHhCCCEEEcCccEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGST--VDLLFRKELPLRG---FDDEMR---------AVVARNLEGRGINLHPRTTIKE 267 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~--V~lv~~~~~~l~~---~~~~~~---------~~l~~~l~~~Gv~i~~~~~v~~ 267 (498)
++|+|||+|+.|+.+|..|++.|.+ |+++++.+.+.-. +...+. ....+.+++.|++++.++++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5899999999999999999999987 9999987653110 111111 1123456778999999999999
Q ss_pred EEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 268 LIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 268 i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
+..+.. .+.+.+|+++.+|.+|+|||.+|....
T Consensus 83 id~~~~--~v~~~~g~~~~~d~lvlAtG~~p~~~~ 115 (410)
T 3ef6_A 83 LDVQTR--TISLDDGTTLSADAIVIATGSRARTMA 115 (410)
T ss_dssp EETTTT--EEEETTSCEEECSEEEECCCEEECCCC
T ss_pred EECCCC--EEEECCCCEEECCEEEEccCCcccCCC
Confidence 965543 577788989999999999999887653
No 214
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.18 E-value=5.5e-07 Score=90.83 Aligned_cols=98 Identities=21% Similarity=0.225 Sum_probs=72.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCC--CcEEEEeeCCCCCC--CC---------CHHHHHHHHHHHHhCCCEEEcCccEEE
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMG--STVDLLFRKELPLR--GF---------DDEMRAVVARNLEGRGINLHPRTTIKE 267 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g--~~V~lv~~~~~~l~--~~---------~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 267 (498)
.|+|+|||+|+.|+.+|..|++.+ .+|+++++.+...- .+ ..++...+.+.+++.||+++.+ +|++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~ 80 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEE
Confidence 368999999999999999999875 68999998774211 00 0111112344566779999877 7889
Q ss_pred EEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCC
Q 042564 268 LIKSEEGVKVITDHGEEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 268 i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 301 (498)
|+.+.+ .|++++|+++++|.+|+|+|.++...
T Consensus 81 Id~~~~--~V~~~~g~~i~YD~LViAtG~~~~~~ 112 (430)
T 3hyw_A 81 IDPDAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp EETTTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred EECCCC--EEEECCCCEEECCEEEEeCCCCccCC
Confidence 965544 57889999999999999999876543
No 215
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.17 E-value=3.1e-06 Score=85.86 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=76.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC--CC-C----C------HHHHHHHHHHHHhCCCEEEcCccEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPL--RG-F----D------DEMRAVVARNLEGRGINLHPRTTIK 266 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l--~~-~----~------~~~~~~l~~~l~~~Gv~i~~~~~v~ 266 (498)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. +. . . .++.....+.+++.|++++++++|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999887532 11 0 0 1111113466778899999999999
Q ss_pred EEEEeCCeEEEEE-CCCeEEEcCEEEEecCCCcCCCC
Q 042564 267 ELIKSEEGVKVIT-DHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 267 ~i~~~~~~~~v~~-~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
++..+.+.+.+.. .+++.+.+|.+|+|||.+|....
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~ 119 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQ 119 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCC
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCC
Confidence 9987766666542 34567999999999999987653
No 216
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.17 E-value=1.3e-06 Score=90.36 Aligned_cols=53 Identities=19% Similarity=0.108 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
..+.+.+.+.+ |++++++++|++|..+++++.|.+.+|+++.+|.||+|++..
T Consensus 215 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 215 GQVSERIMDLL---GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHHHH---GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHHHHc---CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHH
Confidence 34444444433 788999999999988777788889999899999999999864
No 217
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.16 E-value=1.8e-06 Score=85.38 Aligned_cols=44 Identities=30% Similarity=0.406 Sum_probs=38.9
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccc
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
+...+||+|||||++|+++|..|++.|.+|+|+|+ ...+||.|.
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~---------~~~~GG~~~ 69 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDR---------RPHIGGNAY 69 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSSGGGC
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEec---------cCCCCCccc
Confidence 34579999999999999999999999999999995 557888875
No 218
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.15 E-value=2.4e-06 Score=84.19 Aligned_cols=98 Identities=18% Similarity=0.254 Sum_probs=73.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-----------CC-HHHHHHHHHHHHhCCCEEEcCccEEEE
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-----------FD-DEMRAVVARNLEGRGINLHPRTTIKEL 268 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-----------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i 268 (498)
..+++|||+|+.|+.+|..+++.| +|+++++.+..... .+ .++.....+.+++.|++++.++.+..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~i 86 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLI 86 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEE
Confidence 468999999999999999999999 99999987653210 01 111112345567789999999999988
Q ss_pred EEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 269 IKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 269 ~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
..+.. .|. .+|+++.+|.+|+|||.+|....
T Consensus 87 d~~~~--~V~-~~g~~~~~d~lViATGs~p~~p~ 117 (367)
T 1xhc_A 87 DRGRK--VVI-TEKGEVPYDTLVLATGARAREPQ 117 (367)
T ss_dssp ETTTT--EEE-ESSCEEECSEEEECCCEEECCCC
T ss_pred ECCCC--EEE-ECCcEEECCEEEECCCCCCCCCC
Confidence 65433 344 56778999999999999987654
No 219
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.14 E-value=2.9e-06 Score=84.70 Aligned_cols=98 Identities=13% Similarity=0.177 Sum_probs=75.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC--cEEEEeeCCCCCCC---C----------CHHHHHHHHHHHHhCCCEEEcCccEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGS--TVDLLFRKELPLRG---F----------DDEMRAVVARNLEGRGINLHPRTTIK 266 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~--~V~lv~~~~~~l~~---~----------~~~~~~~l~~~l~~~Gv~i~~~~~v~ 266 (498)
++|+|||+|+.|+.+|..|++.|. +|+++++.+.+.-. + ..++.....+.+.+.+++++. .++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 89999987632100 0 111222234567788999999 8999
Q ss_pred EEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 267 ELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 267 ~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
.+..+.. .+.+.+|+.+.+|.+|+|||.+|....
T Consensus 81 ~id~~~~--~v~~~~g~~~~~d~lvlAtG~~p~~~~ 114 (404)
T 3fg2_P 81 SIDREGR--KLLLASGTAIEYGHLVLATGARNRMLD 114 (404)
T ss_dssp EEETTTT--EEEESSSCEEECSEEEECCCEEECCCC
T ss_pred EEECCCC--EEEECCCCEEECCEEEEeeCCCccCCC
Confidence 9975544 577788889999999999999877643
No 220
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.14 E-value=2.3e-05 Score=81.70 Aligned_cols=33 Identities=36% Similarity=0.577 Sum_probs=31.4
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.++||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~ 63 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEM 63 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 468999999999999999999999999999995
No 221
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=4e-06 Score=85.23 Aligned_cols=100 Identities=24% Similarity=0.319 Sum_probs=68.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+.+|..|++.|.+|+|+|+ .+ .+. |
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~------~~---~~l---------~------------------------- 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEA------RE---RIL---------P------------------------- 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECS------SS---SSS---------T-------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEc------CC---ccc---------c-------------------------
Confidence 5899999999999999999999999999993 11 100 0
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP 181 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p~ 181 (498)
.++. .+...+.+.+++.||+++.++ +..++.+.+.+...+|+..++.+|.||+|+|.+|+.+.
T Consensus 209 ---~~~~------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 209 ---TYDS------------ELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp ---TSCH------------HHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred ---ccCH------------HHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 0010 011123344566799999875 55666544555543453358999999999999988754
No 222
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.12 E-value=2.1e-06 Score=84.23 Aligned_cols=43 Identities=28% Similarity=0.366 Sum_probs=37.9
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcC-CCcccccc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVI-GGVGGTCV 72 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~-~~~GG~~~ 72 (498)
...+||+|||||++|++||+.|++.|++|+|+|+ . ..+||.|.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~---------~~~~vGGr~~ 85 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEA---------NANRVGGRIK 85 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECS---------CSSCCBTTCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEec---------cccccCCcee
Confidence 4468999999999999999999999999999995 4 56888874
No 223
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.12 E-value=1.2e-05 Score=79.92 Aligned_cols=101 Identities=16% Similarity=0.191 Sum_probs=75.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-------C-C---HHHH------------------------
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-------F-D---DEMR------------------------ 245 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-------~-~---~~~~------------------------ 245 (498)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... + . ..+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 358999999999999999999999999999987643210 0 0 0000
Q ss_pred ----------------------HHHHHHHHhC--CCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCC
Q 042564 246 ----------------------AVVARNLEGR--GINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 246 ----------------------~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 301 (498)
..+.+.|.+. +++++++++|+++..+++++.+++.+|+++.+|.||.|.|..+...
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vR 185 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKVR 185 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCSCC
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchhHH
Confidence 0112222221 3578899999999888777889999998899999999999987654
No 224
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.11 E-value=1.2e-05 Score=79.78 Aligned_cols=99 Identities=17% Similarity=0.207 Sum_probs=78.1
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC-----CC---------------------------------------
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP-----LR--------------------------------------- 238 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~-----l~--------------------------------------- 238 (498)
+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ..
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 83 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQR 83 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTEE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCce
Confidence 6999999999999999999999999999987631 00
Q ss_pred ----------C-----CC-HHHHHHHHHHHHhCCCEEEcCccEEEEEEeC-CeEEEEE-CCCe--EEEcCEEEEecCCCc
Q 042564 239 ----------G-----FD-DEMRAVVARNLEGRGINLHPRTTIKELIKSE-EGVKVIT-DHGE--EIVADVVLFATGRAP 298 (498)
Q Consensus 239 ----------~-----~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~v~~-~~g~--~i~~D~vi~a~G~~p 298 (498)
. ++ ..+.+.+.+.+.+.|+++++++.|.++..++ +.+.|++ .+|+ ++.+|.||.|.|..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 84 RRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp EEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred EEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 0 01 2345566777777899999999999998653 4466776 6887 799999999999987
Q ss_pred CCC
Q 042564 299 NTK 301 (498)
Q Consensus 299 ~~~ 301 (498)
...
T Consensus 164 ~vr 166 (394)
T 1k0i_A 164 ISR 166 (394)
T ss_dssp STG
T ss_pred HHH
Confidence 753
No 225
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.10 E-value=1.2e-05 Score=81.74 Aligned_cols=100 Identities=20% Similarity=0.320 Sum_probs=69.5
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+.+|..|++.|.+|+|+|+ .+ .+ .|
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~------~~---~~---------l~------------------------- 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEY------MP---EI---------LP------------------------- 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SS---------ST-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEc------CC---cc---------cc-------------------------
Confidence 5899999999999999999999999999993 11 10 00
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEeC-C--CceEEEEcCeEEEcCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQL-D--GTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~~-~--g~~~~~~~d~liiAtG~~p 177 (498)
.++. .+...+.+.+++.||+++.++ +..++ .+.+.+... + |+..++.+|.||+|+|.+|
T Consensus 207 ---~~~~------------~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 207 ---QGDP------------ETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp ---TSCH------------HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred ---ccCH------------HHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCccc
Confidence 0010 111223445667899999885 44443 345566554 4 6545789999999999988
Q ss_pred CCCC
Q 042564 178 QRAP 181 (498)
Q Consensus 178 ~~p~ 181 (498)
+...
T Consensus 272 ~~~~ 275 (464)
T 2eq6_A 272 RTEG 275 (464)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 7653
No 226
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.10 E-value=7.2e-06 Score=81.74 Aligned_cols=30 Identities=40% Similarity=0.442 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 25 DLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 25 dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
+|+||||||+|+++|+.|++.|.+|+|+||
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 799999999999999999999999999995
No 227
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.10 E-value=9.7e-06 Score=82.28 Aligned_cols=98 Identities=22% Similarity=0.345 Sum_probs=68.4
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||++|+.+|..|++.|.+|+++|+ .+ .+ .|
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~------~~---~~---------l~------------------------- 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEY------MD---RI---------LP------------------------- 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SS---------CT-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEec------CC---cc---------cc-------------------------
Confidence 5799999999999999999999999999993 11 10 00
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
..+ . .+...+.+.+++.|++++.++ +..++ .+.+.+.+.+|. ++.+|.||+|+|.+|+.+
T Consensus 205 ---~~~-~-----------~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~--~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 205 ---TMD-L-----------EVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGE--VLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp ---TSC-H-----------HHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSC--EEEESEEEECSCEEECCT
T ss_pred ---ccC-H-----------HHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCe--EEEcCEEEECcCCCcCCC
Confidence 000 0 111222344556799999875 55543 455777766664 799999999999988765
Q ss_pred C
Q 042564 181 P 181 (498)
Q Consensus 181 ~ 181 (498)
.
T Consensus 268 ~ 268 (455)
T 2yqu_A 268 G 268 (455)
T ss_dssp T
T ss_pred C
Confidence 4
No 228
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.09 E-value=8.8e-06 Score=82.76 Aligned_cols=99 Identities=10% Similarity=0.030 Sum_probs=75.5
Q ss_pred eEEEEcCCHHHHHHHHHHHHCC-----CcEEEEeeCCCCCC-------------------------C-------------
Q 042564 203 RAVVLGGGYIAVEFASIWRGMG-----STVDLLFRKELPLR-------------------------G------------- 239 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g-----~~V~lv~~~~~~l~-------------------------~------------- 239 (498)
+|+|||+|+.|+.+|..|.+.| .+|+++++.+.+-. .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 89999998773210 0
Q ss_pred -------------CCHHHHHHHHHHHHhCCCEEEcCccEEEEEEe---CCe--EEEEECCCe----EEEcCEEEEecCCC
Q 042564 240 -------------FDDEMRAVVARNLEGRGINLHPRTTIKELIKS---EEG--VKVITDHGE----EIVADVVLFATGRA 297 (498)
Q Consensus 240 -------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~~--~~v~~~~g~----~i~~D~vi~a~G~~ 297 (498)
...++.+.+....++.++.++++++|.++..+ ++. +.|.+.+|+ ++.+|.||+|+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 01234445555556668999999999999875 332 366666664 79999999999998
Q ss_pred cCCC
Q 042564 298 PNTK 301 (498)
Q Consensus 298 p~~~ 301 (498)
|...
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 8754
No 229
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.08 E-value=2.8e-06 Score=85.40 Aligned_cols=54 Identities=11% Similarity=0.092 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCc
Q 042564 244 MRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 244 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
+.+......+..+.+++++++|++|..+++++.|++.+|+ +.+|.||+|++...
T Consensus 205 ~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~ 258 (424)
T 2b9w_A 205 TQAMFEHLNATLEHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEK 258 (424)
T ss_dssp HHHHHHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHH
T ss_pred HHHHHHHHHHhhcceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHH
Confidence 3333333344446678999999999887777888888886 89999999998753
No 230
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.07 E-value=6.9e-06 Score=86.26 Aligned_cols=102 Identities=18% Similarity=0.266 Sum_probs=78.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC----------CC-C-C--HHHHHHHHHHHHhCCCEEEcCcc
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPL----------RG-F-D--DEMRAVVARNLEGRGINLHPRTT 264 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l----------~~-~-~--~~~~~~l~~~l~~~Gv~i~~~~~ 264 (498)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. .. . + ..+...+....++.|+++++++.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 115 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSE 115 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 46899999999999999999998 88999999987631 10 0 1 11223345556678999999999
Q ss_pred EEEEEEeCCeEEEEE-CCCe--EEEcCEEEEecCCCcCCCC
Q 042564 265 IKELIKSEEGVKVIT-DHGE--EIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 265 v~~i~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~~p~~~~ 302 (498)
|.++..+++.+.+.. .+|+ .+.+|.+|+|||.+|....
T Consensus 116 V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~ 156 (588)
T 3ics_A 116 VVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPS 156 (588)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCC
Confidence 999987776666654 4555 6899999999999887653
No 231
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.07 E-value=8.4e-06 Score=83.17 Aligned_cols=101 Identities=14% Similarity=0.189 Sum_probs=67.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCC------CCC-C------CHHH------HHHHHHHHH-hCCCEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELP------LRG-F------DDEM------RAVVARNLE-GRGINL 259 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~------l~~-~------~~~~------~~~l~~~l~-~~Gv~i 259 (498)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+ ++. + ..++ .....+.+. +.|+++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 83 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVEA 83 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcEE
Confidence 6899999999999999999998 8999999998763 111 0 1111 111222333 579999
Q ss_pred EcCccEEEEEEeCCeEEEEE-CCCe--EEEcCEEEEecCCCcCCCC
Q 042564 260 HPRTTIKELIKSEEGVKVIT-DHGE--EIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 260 ~~~~~v~~i~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~~p~~~~ 302 (498)
+++++|.++..+.+.+.+.. .+|+ .+.+|.+|+|||.+|....
T Consensus 84 ~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ 129 (472)
T 3iwa_A 84 LVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPP 129 (472)
T ss_dssp ECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCS
T ss_pred EECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCC
Confidence 99999999987776666654 3354 7899999999999887653
No 232
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.07 E-value=2.9e-06 Score=85.68 Aligned_cols=56 Identities=11% Similarity=0.131 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEE-eCCe-EEEEECCCeEEEcCEEEEecCCC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIK-SEEG-VKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~-~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
.++.+.+.+.+++.|++++++++|++|.. +++. ..|.+.+|+++.||.||.+++..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 46888999999999999999999999987 4444 67888899899999999999988
No 233
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.07 E-value=6.4e-06 Score=82.53 Aligned_cols=99 Identities=18% Similarity=0.172 Sum_probs=76.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCc--EEEEeeCCCCC------C-C------CCHHHHHHHHHHHHhCCCEEEcCccEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGST--VDLLFRKELPL------R-G------FDDEMRAVVARNLEGRGINLHPRTTIK 266 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~--V~lv~~~~~~l------~-~------~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 266 (498)
.+|+|||+|+.|+.+|..|++.|.+ |+++++.+.+. + . ....+.....+.+++.|++++.++++.
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 89 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVV 89 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCEE
T ss_pred CcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEEE
Confidence 5899999999999999999999987 99999876421 0 0 011222223566778899999999999
Q ss_pred EEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 267 ELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 267 ~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
.+..+.. .+.+.+|+.+.+|.+|+|||.+|....
T Consensus 90 ~id~~~~--~v~~~~g~~~~~d~lvlAtG~~~~~~~ 123 (415)
T 3lxd_A 90 SLDPAAH--TVKLGDGSAIEYGKLIWATGGDPRRLS 123 (415)
T ss_dssp EEETTTT--EEEETTSCEEEEEEEEECCCEECCCCB
T ss_pred EEECCCC--EEEECCCCEEEeeEEEEccCCccCCCC
Confidence 9965443 577788989999999999998887653
No 234
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.06 E-value=2.4e-05 Score=81.14 Aligned_cols=97 Identities=15% Similarity=0.184 Sum_probs=79.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC--------------------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL-------------------------------------------- 237 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l-------------------------------------------- 237 (498)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999875320
Q ss_pred -------------------------CC----C-CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCC----eEEEEECCC-
Q 042564 238 -------------------------RG----F-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEE----GVKVITDHG- 282 (498)
Q Consensus 238 -------------------------~~----~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----~~~v~~~~g- 282 (498)
+. + ...+.+.+.+.+++.|++++++++|+++..+++ ++.+++.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 00 0 123556677788888999999999999998888 778877765
Q ss_pred --eEEEcCEEEEecCCCc
Q 042564 283 --EEIVADVVLFATGRAP 298 (498)
Q Consensus 283 --~~i~~D~vi~a~G~~p 298 (498)
.++.+|.||.|.|...
T Consensus 166 ~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 166 GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEEEEEEEEECCCTTC
T ss_pred CeEEEEeCEEEECCCCcc
Confidence 6899999999999865
No 235
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.06 E-value=3e-06 Score=87.05 Aligned_cols=56 Identities=14% Similarity=0.255 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhCC-CEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCC
Q 042564 242 DEMRAVVARNLEGRG-INLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 242 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
..+.+.+.+.+.+.| ++++++++|++|..+++++.|++.+|+++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 567888888898888 99999999999988777788888888889999999999964
No 236
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.06 E-value=2.8e-05 Score=74.45 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=73.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC---C--------CCC----CCHHHHHHHHHHHHhCCCEEEcCccEEE
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL---P--------LRG----FDDEMRAVVARNLEGRGINLHPRTTIKE 267 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~---~--------l~~----~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 267 (498)
.|+|||+|+.|+.+|..+++.|.+|+++++... + ++. ..+++.........+.+..+..+..+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 699999999999999999999999999997531 0 121 2356777777777888888887766655
Q ss_pred EEEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 268 LIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 268 i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
.... ...+...+++++.+|.+|+|||.+|....
T Consensus 88 ~~~~--~~~~~~~~~~~~~~d~liiAtGs~~~~~~ 120 (312)
T 4gcm_A 88 EDKG--EYKVINFGNKELTAKAVIIATGAEYKKIG 120 (312)
T ss_dssp EECS--SCEEEECSSCEEEEEEEEECCCEEECCCC
T ss_pred eeee--cceeeccCCeEEEeceeEEcccCccCcCC
Confidence 4322 23345567788999999999999887644
No 237
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.06 E-value=2.7e-05 Score=78.91 Aligned_cols=99 Identities=21% Similarity=0.223 Sum_probs=77.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC----C--------------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR----G-------------------------------------- 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~----~-------------------------------------- 239 (498)
-+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-. .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 3799999999999999999999999999998753100 0
Q ss_pred ----------CC-HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEE-EEEC---CCe--EEEcCEEEEecCCCcCC
Q 042564 240 ----------FD-DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVK-VITD---HGE--EIVADVVLFATGRAPNT 300 (498)
Q Consensus 240 ----------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-v~~~---~g~--~i~~D~vi~a~G~~p~~ 300 (498)
++ ..+.+.+.+.+.+.|+++++++.|+++..+++.+. |++. +|+ ++.+|.||.|+|..+..
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 00 24566677777888999999999999988776643 5443 676 79999999999987764
No 238
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.05 E-value=3.2e-06 Score=84.33 Aligned_cols=99 Identities=21% Similarity=0.197 Sum_probs=72.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCC--CcEEEEeeCCCCCCC-CCHHHH---------HHHHHHHHhCCCEEEcCccEEEE
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMG--STVDLLFRKELPLRG-FDDEMR---------AVVARNLEGRGINLHPRTTIKEL 268 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g--~~V~lv~~~~~~l~~-~~~~~~---------~~l~~~l~~~Gv~i~~~~~v~~i 268 (498)
.|+|+|||+|+.|+.+|..|++.+ .+|+++++.+..... ....+. ..-.+.+.+.||+++.+ .|+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 589999999999999999998865 589999987642211 111110 00123456689999876 78888
Q ss_pred EEeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 269 IKSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 269 ~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
+.+.+ .+.+.+|+++.+|.+|+|+|.+++...
T Consensus 81 d~~~~--~v~~~~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 81 DPDKK--LVKTAGGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp ETTTT--EEEETTSCEEECSEEEECCCEEECGGG
T ss_pred EccCc--EEEecccceeecceeeeccCCccccCC
Confidence 65543 577889999999999999999887654
No 239
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.05 E-value=2.3e-06 Score=88.34 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=35.0
Q ss_pred CEEEcCccEEEEEEe-CCeEEEEECCCeEEEcCEEEEecCC
Q 042564 257 INLHPRTTIKELIKS-EEGVKVITDHGEEIVADVVLFATGR 296 (498)
Q Consensus 257 v~i~~~~~v~~i~~~-~~~~~v~~~~g~~i~~D~vi~a~G~ 296 (498)
.+|+++++|++|..+ ++.+.|++.+|+++.+|.||++++.
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCH
Confidence 569999999999875 5568899999988999999999874
No 240
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.05 E-value=2.5e-05 Score=81.47 Aligned_cols=98 Identities=23% Similarity=0.285 Sum_probs=75.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC-CC-----------------------CC------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL-PL-----------------------RG------------------ 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~-~l-----------------------~~------------------ 239 (498)
-+|+|||||..|+++|..+++.|.+|.++++... +- ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 3799999999999999999999999999998631 10 00
Q ss_pred ------------CC-HHHHHHHHHHHHh-CCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 240 ------------FD-DEMRAVVARNLEG-RGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 240 ------------~~-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
.| ..+.+.+.+.+++ .|++++ +..|..+..+++. ..|.+.+|..+.+|.||+|+|..+..
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 01 1345566777777 699995 5689999876665 46788889889999999999987643
No 241
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.04 E-value=1.7e-05 Score=77.08 Aligned_cols=94 Identities=11% Similarity=0.151 Sum_probs=71.0
Q ss_pred eEEEEcCCHHHHHHHHHHHH---CCCcEEEEeeCCCCCC-------------------C----CCH---HHHH-------
Q 042564 203 RAVVLGGGYIAVEFASIWRG---MGSTVDLLFRKELPLR-------------------G----FDD---EMRA------- 246 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~---~g~~V~lv~~~~~~l~-------------------~----~~~---~~~~------- 246 (498)
+|+|||+|..|+-+|..|.+ .|.+|+++++.+.+-. . .+. .+.+
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 8999999997642100 0 000 1111
Q ss_pred -------------------------------HHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecC
Q 042564 247 -------------------------------VVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATG 295 (498)
Q Consensus 247 -------------------------------~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G 295 (498)
.+....++.|++++++++|.+|..+++++.|.+.+|+.+.+|.||+|++
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p 162 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMP 162 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSC
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCC
Confidence 1112222338999999999999988888889998888889999999997
Q ss_pred C
Q 042564 296 R 296 (498)
Q Consensus 296 ~ 296 (498)
.
T Consensus 163 ~ 163 (342)
T 3qj4_A 163 V 163 (342)
T ss_dssp H
T ss_pred H
Confidence 4
No 242
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.04 E-value=3e-06 Score=87.27 Aligned_cols=43 Identities=33% Similarity=0.348 Sum_probs=35.7
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccc
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTC 71 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~ 71 (498)
|...+||+|||||++|++||+.|++.|++|+|+|+ ...+||.|
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~---------~~~~GG~~ 52 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEA---------EGKAGGKL 52 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECS---------SSSSCSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEe---------CCCCCCce
Confidence 45568999999999999999999999999999995 45567765
No 243
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.04 E-value=3.3e-06 Score=83.14 Aligned_cols=42 Identities=24% Similarity=0.344 Sum_probs=37.4
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVI 73 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~ 73 (498)
++|++|||||++|+++|.+|++.|.+|+|+|+ ...+||.|..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~---------~~~~GG~~~~ 42 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEK---------RNHIGGNAYT 42 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECS---------SSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEec---------CCCCCcceEe
Confidence 37999999999999999999999999999995 4568888854
No 244
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.04 E-value=4.2e-05 Score=76.11 Aligned_cols=98 Identities=17% Similarity=0.163 Sum_probs=73.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-------CCHHHHH-----------------------------
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-------FDDEMRA----------------------------- 246 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-------~~~~~~~----------------------------- 246 (498)
+|+|||+|+.|+-+|..|++.|.+|+++++.+.+-.. +.+...+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 6999999999999999999999999999987643210 1111111
Q ss_pred ------------------------------HHHHHHHh-CCCEEEcCccEEEEEEeCC-eEEEEECCCeEEEcCEEEEec
Q 042564 247 ------------------------------VVARNLEG-RGINLHPRTTIKELIKSEE-GVKVITDHGEEIVADVVLFAT 294 (498)
Q Consensus 247 ------------------------------~l~~~l~~-~Gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~i~~D~vi~a~ 294 (498)
.+.+.|.+ .+..+++++++.+++..++ .+.++++||+++.+|+||-|-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgAD 162 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGAD 162 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECC
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECC
Confidence 12333333 2556889999999987655 488999999999999999999
Q ss_pred CCCcCC
Q 042564 295 GRAPNT 300 (498)
Q Consensus 295 G~~p~~ 300 (498)
|..+..
T Consensus 163 G~~S~v 168 (412)
T 4hb9_A 163 GSNSKV 168 (412)
T ss_dssp CTTCHH
T ss_pred CCCcch
Confidence 987643
No 245
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.03 E-value=2.6e-06 Score=86.38 Aligned_cols=51 Identities=14% Similarity=0.175 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCC
Q 042564 243 EMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 243 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
.+.+.+.+. .|++++++++|++|..++++ +.|.+ +|+++.+|.||+|++..
T Consensus 216 ~l~~~l~~~---lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 216 QVSIRMAEA---LGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHH---HGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred HHHHHHHHh---cCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 344444433 37899999999999988877 77765 67789999999999864
No 246
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.03 E-value=3.8e-05 Score=79.69 Aligned_cols=96 Identities=20% Similarity=0.243 Sum_probs=74.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC--------CC-------------CCC----------------HHH
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP--------LR-------------GFD----------------DEM 244 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~--------l~-------------~~~----------------~~~ 244 (498)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ .+ .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 37999999999999999999999999999987532 01 011 234
Q ss_pred HHHHHHHHHhCC--CEEEcCccEEEEEEeCC--eEEEEECCCeEEEcCEEEEecCCC
Q 042564 245 RAVVARNLEGRG--INLHPRTTIKELIKSEE--GVKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 245 ~~~l~~~l~~~G--v~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
.+.+....++.+ +.++++++|.++..+++ ...|++.+|+++.+|.||+|+|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 555555556655 67899999999987654 577888899889999999999953
No 247
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.02 E-value=1.1e-05 Score=80.72 Aligned_cols=100 Identities=18% Similarity=0.207 Sum_probs=73.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCC--cEEEEeeCCCCCCC---CCHHHHHH-H-----HHHHHhCCCEEEcCccEEEEE
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGS--TVDLLFRKELPLRG---FDDEMRAV-V-----ARNLEGRGINLHPRTTIKELI 269 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~--~V~lv~~~~~~l~~---~~~~~~~~-l-----~~~l~~~Gv~i~~~~~v~~i~ 269 (498)
..+|+|||+|+.|+.+|..|++.|. +|+++++.+.+... +...+... . .+.+++.|++++.+++|..+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~ 86 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFD 86 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEE
Confidence 3579999999999999999999987 59999987753211 11111110 0 003456799999999999986
Q ss_pred EeCCeEEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 270 KSEEGVKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 270 ~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
.+.. .|.+.+|+++.+|.+|+|||.+|....
T Consensus 87 ~~~~--~v~~~~g~~~~~d~lviAtG~~~~~~~ 117 (408)
T 2gqw_A 87 PQAH--TVALSDGRTLPYGTLVLATGAAPRALP 117 (408)
T ss_dssp TTTT--EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred CCCC--EEEECCCCEEECCEEEECCCCCCCCCC
Confidence 5443 566778888999999999999887643
No 248
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.02 E-value=7.5e-06 Score=85.54 Aligned_cols=101 Identities=15% Similarity=0.146 Sum_probs=73.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCCC-----------C-C-H-HHHHHHHHHHHhCCCEEEcCccE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPLRG-----------F-D-D-EMRAVVARNLEGRGINLHPRTTI 265 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l~~-----------~-~-~-~~~~~l~~~l~~~Gv~i~~~~~v 265 (498)
++|+|||+|+.|+.+|..|++. +.+|+++++.+.+.-. . + . .+........++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5799999999999999999988 7899999998753100 0 0 0 01111233334479999999999
Q ss_pred EEEEEeCCeEEEEE-CCCe--EEEcCEEEEecCCCcCCCC
Q 042564 266 KELIKSEEGVKVIT-DHGE--EIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 266 ~~i~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~~p~~~~ 302 (498)
.++..+.+.+.+.. .+|+ ++.+|.+|+|||.+|....
T Consensus 82 ~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ 121 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPP 121 (565)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCC
Confidence 99987766666654 2343 7899999999999887654
No 249
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.00 E-value=3.7e-06 Score=85.88 Aligned_cols=55 Identities=22% Similarity=0.275 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
..+.+.+.+.+++.|++++++++|++|..++++ +.|.+ ++.++.+|.||+|++..
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHH
Confidence 357888889999999999999999999887666 67765 45579999999999753
No 250
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.00 E-value=5.2e-06 Score=83.66 Aligned_cols=58 Identities=16% Similarity=0.162 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
..+.+.+.+.+++.|++++++++|++|..+++++..+..+|+++.||.||+|+|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 4688888888888999999999999998877775544457888999999999998875
No 251
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.00 E-value=3.1e-05 Score=76.60 Aligned_cols=98 Identities=19% Similarity=0.191 Sum_probs=69.2
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
..+++|||||+.|+.+|..|++.|.+|+++|+ .+ .+. |
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~------~~---~~~---------~------------------------ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAP------CE---QVM---------P------------------------ 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES------SS---SSS---------T------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEec------Cc---chh---------h------------------------
Confidence 46899999999999999999999999999993 11 100 0
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEE--eCCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIV--GPNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i--~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
...+ . .+...+.+.+++.|++++.++ +..+ +.+.+.+.+.+|+ ++.+|.||+|+|.+|+.
T Consensus 183 ---~~~~-~-----------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~--~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 183 ---GLLH-P-----------AAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGE--VIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp ---TTSC-H-----------HHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSC--EEEESEEEECSCEEECC
T ss_pred ---cccC-H-----------HHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCC--EEECCEEEECcCCCcCH
Confidence 0000 0 112223345667899999886 5544 3456777777775 79999999999988865
No 252
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.99 E-value=5.1e-05 Score=78.79 Aligned_cols=98 Identities=23% Similarity=0.294 Sum_probs=75.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC-CC-----------------------CC------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL-PL-----------------------RG------------------ 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~-~l-----------------------~~------------------ 239 (498)
-+|+|||||..|+++|..+++.|.+|.++++... +- ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999998631 10 00
Q ss_pred ------------CC-HHHHHHHHHHHHh-CCCEEEcCccEEEEEEeCCe-EEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 240 ------------FD-DEMRAVVARNLEG-RGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 240 ------------~~-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
.| ..+.+.+.+.+++ .|++++ +..|.++..+++. ..|.+.+|+.+.+|.||+|+|..++.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 00 1244556677777 599995 6789999876665 46888899899999999999987654
No 253
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=2e-05 Score=79.99 Aligned_cols=101 Identities=29% Similarity=0.403 Sum_probs=68.4
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
..+++|||||+.|+.+|..|++.|.+|+|+|+ .+ .+ .|
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~------~~---~~---------l~------------------------ 207 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEG------AG---EI---------LS------------------------ 207 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEES------SS---SS---------ST------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEc------CC---cc---------cc------------------------
Confidence 36899999999999999999999999999993 11 10 00
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEeC-CCceEEEEcCeEEEcCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQL-DGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~~-~g~~~~~~~d~liiAtG~~p~ 178 (498)
.++. .+...+.+.+++.||+++.++ +..++ .+.+.+... +|+..++.+|.||+|+|.+|+
T Consensus 208 ----~~~~------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 208 ----GFEK------------QMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp ----TSCH------------HHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred ----ccCH------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 0110 111223345667899999885 44443 344555542 333457999999999999887
Q ss_pred CCC
Q 042564 179 RAP 181 (498)
Q Consensus 179 ~p~ 181 (498)
...
T Consensus 272 ~~~ 274 (455)
T 1ebd_A 272 TDE 274 (455)
T ss_dssp CSS
T ss_pred cCc
Confidence 643
No 254
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.99 E-value=5.2e-06 Score=85.09 Aligned_cols=53 Identities=17% Similarity=0.184 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCC---eEEEcCEEEEecCCC
Q 042564 243 EMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHG---EEIVADVVLFATGRA 297 (498)
Q Consensus 243 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g---~~i~~D~vi~a~G~~ 297 (498)
.+.+.+.+.+.+ .+++++++|++|..+++++.|++.+| +++.+|.||+|++..
T Consensus 240 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 466666665543 67999999999998888888888776 679999999999753
No 255
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.99 E-value=2.2e-05 Score=81.86 Aligned_cols=99 Identities=21% Similarity=0.285 Sum_probs=79.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC-------------------------------------C-----C
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL-------------------------------------R-----G 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l-------------------------------------~-----~ 239 (498)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999754210 0 0
Q ss_pred ---------------C-CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEE--CCC-eEEEcCEEEEecCCCcCC
Q 042564 240 ---------------F-DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT--DHG-EEIVADVVLFATGRAPNT 300 (498)
Q Consensus 240 ---------------~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~--~~g-~~i~~D~vi~a~G~~p~~ 300 (498)
. ...+.+.+.+.+++.|++++++++|++++.+++++.+++ .+| +++.+|.||.|.|..+..
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~v 209 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTV 209 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHH
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchH
Confidence 0 124566677778778999999999999988877777777 678 689999999999987643
No 256
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.98 E-value=5.3e-06 Score=81.46 Aligned_cols=35 Identities=29% Similarity=0.301 Sum_probs=32.3
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
|..++||+|||||++|+++|++|++.|.+|+|+|+
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEec
Confidence 44568999999999999999999999999999994
No 257
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.98 E-value=5.2e-05 Score=78.98 Aligned_cols=97 Identities=22% Similarity=0.224 Sum_probs=75.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC------------------------C------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR------------------------G------------------ 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~------------------------~------------------ 239 (498)
-+|+|||+|..|+++|..+++.|.+|.++++....+. .
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~~ 101 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNR 101 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhccc
Confidence 4899999999999999999999999999998631000 0
Q ss_pred ------------CC-HHHHHHHHHHHHhC-CCEEEcCccEEEEEEeCCeEE-EEECCCeEEEcCEEEEecCCCcC
Q 042564 240 ------------FD-DEMRAVVARNLEGR-GINLHPRTTIKELIKSEEGVK-VITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 240 ------------~~-~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
.| ..+...+.+.+++. |++++. ..|..+..+++.+. |.+.+|+.+.+|.||+|+|..++
T Consensus 102 ~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 102 SKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp SSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred ccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 01 13455666777774 999965 48999887776654 88888989999999999998755
No 258
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.98 E-value=1.3e-05 Score=81.17 Aligned_cols=100 Identities=21% Similarity=0.314 Sum_probs=74.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC--C--------C-C-C-HHHHHHHHHHHHhCCCEEEcCccEEE
Q 042564 203 RAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPL--R--------G-F-D-DEMRAVVARNLEGRGINLHPRTTIKE 267 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l--~--------~-~-~-~~~~~~l~~~l~~~Gv~i~~~~~v~~ 267 (498)
+|+|||+|+.|+.+|..+++. |.+|+++++.+.+. + . . + .++.....+.+++.|++++.++.+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 81 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITA 81 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEEE
Confidence 699999999999999999987 89999999977431 0 0 0 1 11122234567778999999999999
Q ss_pred EEEeCCeEEEEE-CCCe--EEEcCEEEEecCCCcCCCC
Q 042564 268 LIKSEEGVKVIT-DHGE--EIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 268 i~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~~p~~~~ 302 (498)
+..+++.+.+.. .+|+ ++.+|.+|+|||.+|....
T Consensus 82 i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ 119 (447)
T 1nhp_A 82 IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD 119 (447)
T ss_dssp EETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCC
Confidence 876666666554 3454 4899999999999887653
No 259
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.98 E-value=1.6e-05 Score=80.55 Aligned_cols=97 Identities=22% Similarity=0.259 Sum_probs=68.5
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+.+|..|++.|.+|+|+|+ .+ .+.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~------~~---~~l----------------------------------- 203 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEM------FD---APL----------------------------------- 203 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SSS-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEe------CC---chh-----------------------------------
Confidence 5899999999999999999999999999993 11 100
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC---CEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP---NEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~---~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
+.++. .+...+.+.+++.|++++.++ +..++. ..+.+.+.+|+ ++.+|.||+|+|.+|+.
T Consensus 204 --~~~~~------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~--~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 204 --PSFDP------------MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGR--SETVDCLIWAIGREPAN 267 (450)
T ss_dssp --TTSCH------------HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSC--EEEESEEEECSCEEESC
T ss_pred --hhhhH------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCc--EEEcCEEEECCCCCcCC
Confidence 00110 011223344566799999885 555542 23677777775 78999999999998876
Q ss_pred C
Q 042564 180 A 180 (498)
Q Consensus 180 p 180 (498)
.
T Consensus 268 ~ 268 (450)
T 1ges_A 268 D 268 (450)
T ss_dssp T
T ss_pred C
Confidence 4
No 260
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.97 E-value=5.2e-05 Score=79.18 Aligned_cols=98 Identities=22% Similarity=0.187 Sum_probs=75.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC---------------------------------------C--
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG---------------------------------------F-- 240 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~---------------------------------------~-- 240 (498)
.+|+|||+|..|+..|..+++.|.+|+++++.+.+... .
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 48999999999999999999999999999987643100 0
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeC-
Q 042564 241 -----------------------------------------------DDEMRAVVARNLEGRGINLHPRTTIKELIKSE- 272 (498)
Q Consensus 241 -----------------------------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~- 272 (498)
...+.+.+.+.+++.||+++++++|+++..++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 02345566777788899999999999998765
Q ss_pred Ce-EEEEE--CCCe--EEEcCEEEEecCCCcC
Q 042564 273 EG-VKVIT--DHGE--EIVADVVLFATGRAPN 299 (498)
Q Consensus 273 ~~-~~v~~--~~g~--~i~~D~vi~a~G~~p~ 299 (498)
+. ..|++ .+|+ ++.+|.||+|+|....
T Consensus 287 g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 287 GTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp SCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 43 23443 3675 6889999999997543
No 261
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.96 E-value=3e-06 Score=86.24 Aligned_cols=52 Identities=17% Similarity=0.217 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCC
Q 042564 243 EMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGR 296 (498)
Q Consensus 243 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 296 (498)
.+.+.+.+.+.+ ++++++++|++|..+++++.|++.+|+++.+|.||+|++.
T Consensus 236 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 236 TLVEEIEKQLKL--TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp HHHHHHHHTCCS--EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCH
Confidence 444444443322 6899999999999888888899999988999999999975
No 262
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.96 E-value=6.8e-05 Score=76.87 Aligned_cols=98 Identities=19% Similarity=0.216 Sum_probs=79.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC-------------------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR------------------------------------------- 238 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~------------------------------------------- 238 (498)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+..
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 92 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFG 92 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecccc
Confidence 4899999999999999999999999999998653210
Q ss_pred ----CC-------CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCe---EEEcCEEEEecCCCcC
Q 042564 239 ----GF-------DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGE---EIVADVVLFATGRAPN 299 (498)
Q Consensus 239 ----~~-------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~---~i~~D~vi~a~G~~p~ 299 (498)
.. -..+.+.+.+.+++.|++++++++|.+++.+++++.+++.+++ ++.+|.||.|.|..+.
T Consensus 93 ~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 93 VLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp GSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred cCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 00 0235556777778889999999999999988888888887764 7999999999998764
No 263
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.95 E-value=5.4e-06 Score=84.66 Aligned_cols=53 Identities=19% Similarity=0.295 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEE---CCCeEEEcCEEEEecCCC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT---DHGEEIVADVVLFATGRA 297 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~---~~g~~i~~D~vi~a~G~~ 297 (498)
..+.+.+.+.+ |++++++++|++|..+++++.|++ .+|+++.+|.||+|++..
T Consensus 238 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 238 QVLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAH 293 (478)
T ss_dssp HHHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHH
T ss_pred HHHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHH
Confidence 44666565555 678999999999987776777877 678889999999999853
No 264
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.95 E-value=9.8e-06 Score=82.17 Aligned_cols=100 Identities=14% Similarity=0.105 Sum_probs=74.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC----------CC-C---CH-HHHHHHHHHHHhCCCEEEcCccE
Q 042564 203 RAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPL----------RG-F---DD-EMRAVVARNLEGRGINLHPRTTI 265 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l----------~~-~---~~-~~~~~l~~~l~~~Gv~i~~~~~v 265 (498)
+++|||+|+.|+.+|..|++. |.+|+++++.+.+. .. . ++ ++...+.+.+++.|++++.++.+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 699999999999999999998 99999999987421 00 0 11 11112345677889999999999
Q ss_pred EEEEEeCCeEEEEEC-C--CeEEEcCEEEEecCCCcCCCC
Q 042564 266 KELIKSEEGVKVITD-H--GEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 266 ~~i~~~~~~~~v~~~-~--g~~i~~D~vi~a~G~~p~~~~ 302 (498)
..+..+++.+.+... + ++++.+|.+|+|+|.+|....
T Consensus 82 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~ 121 (452)
T 2cdu_A 82 TNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPP 121 (452)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCC
Confidence 998766666655542 2 457999999999999887654
No 265
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.94 E-value=7.2e-05 Score=76.70 Aligned_cols=99 Identities=18% Similarity=0.186 Sum_probs=79.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC------------------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG------------------------------------------ 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~------------------------------------------ 239 (498)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 91 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFG 91 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecccc
Confidence 47999999999999999999999999999986532100
Q ss_pred -C-----------CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCe---EEEcCEEEEecCCCcCC
Q 042564 240 -F-----------DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGE---EIVADVVLFATGRAPNT 300 (498)
Q Consensus 240 -~-----------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~---~i~~D~vi~a~G~~p~~ 300 (498)
. -..+.+.+.+.+++.|++++++++|.+++.+++++.+++.+++ ++.+|.||.|.|.....
T Consensus 92 ~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~V 167 (500)
T 2qa1_A 92 VLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSV 167 (500)
T ss_dssp GSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHH
T ss_pred cCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHH
Confidence 0 0234556677777889999999999999988888888877664 79999999999987643
No 266
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.94 E-value=3.4e-05 Score=78.36 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=68.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+.+|..|++.|.+|+++++ .+ .+.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~------~~---~~l----------------------------------- 202 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVAL------ED---RLL----------------------------------- 202 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SSS-----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEc------CC---ccc-----------------------------------
Confidence 5799999999999999999999999999993 11 100
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
+.++. . +...+.+.+++.||+++.++ +..++ .+.+.|.+.+|+. ++.+|.||+|+|.+|+..
T Consensus 203 --~~~~~-~-----------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~-~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 203 --FQFDP-L-----------LSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTR-LEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp --TTSCH-H-----------HHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCE-EEEESEEEECSCEEESCT
T ss_pred --cccCH-H-----------HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcE-EEEcCEEEECCCCCcCCC
Confidence 00110 0 11123345667899999886 55553 3457777777643 689999999999988764
No 267
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.94 E-value=3.1e-05 Score=79.04 Aligned_cols=99 Identities=22% Similarity=0.313 Sum_probs=68.2
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+.+|..|++.|.+|+++++ .+ .+.
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~------~~---~~l----------------------------------- 219 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEF------QP---QIG----------------------------------- 219 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SSS-----------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEe------CC---ccc-----------------------------------
Confidence 5899999999999999999999999999993 11 100
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC----CEEEEEeC---CCceEEEEcCeEEEcCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP----NEVEVTQL---DGTKLSYSAKHILIATGS 175 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~----~~~~v~~~---~g~~~~~~~d~liiAtG~ 175 (498)
+.++ ..+...+.+.+++.||+++.++ +..++. +.+.+... +|+..++.+|.||+|+|.
T Consensus 220 --~~~~------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 220 --ASMD------------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp --SSSC------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred --cccC------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 0111 0112233445677899999885 455542 34555543 333457999999999999
Q ss_pred CCCCC
Q 042564 176 RAQRA 180 (498)
Q Consensus 176 ~p~~p 180 (498)
+|+..
T Consensus 286 ~p~~~ 290 (478)
T 1v59_A 286 RPYIA 290 (478)
T ss_dssp EECCT
T ss_pred CcCCC
Confidence 88765
No 268
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.94 E-value=8.3e-06 Score=83.58 Aligned_cols=101 Identities=14% Similarity=0.114 Sum_probs=74.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCC---CcEEEEeeCCCCC--C--------C---CCHHHHHHHHHHHHhCCCEEEcCccE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMG---STVDLLFRKELPL--R--------G---FDDEMRAVVARNLEGRGINLHPRTTI 265 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g---~~V~lv~~~~~~l--~--------~---~~~~~~~~l~~~l~~~Gv~i~~~~~v 265 (498)
.+|+|||+|+.|+.+|..|++.| .+|+++++.+.+. + . ...++.....+.+++.|++++.++.+
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~v 115 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPV 115 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCEE
Confidence 68999999999999999999987 9999999876421 0 0 01111112345677789999999999
Q ss_pred EEEEEeCCeEEEEEC-CCeEEEcCEEEEecCCCcCCCC
Q 042564 266 KELIKSEEGVKVITD-HGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 266 ~~i~~~~~~~~v~~~-~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
..+..+++.+.+... +++++.+|.+|+|||.+|....
T Consensus 116 ~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~ 153 (490)
T 2bc0_A 116 QSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPP 153 (490)
T ss_dssp EEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCS
T ss_pred EEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCC
Confidence 999766665555422 2357999999999999887653
No 269
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.93 E-value=0.0001 Score=75.80 Aligned_cols=99 Identities=24% Similarity=0.350 Sum_probs=77.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC--------C----------C------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL--------R----------G------------------------ 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l--------~----------~------------------------ 239 (498)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+..- + .
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 479999999999999999999999999999875100 0 0
Q ss_pred --------------------CC-HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe---EEEEECCCe--EEEcCEEEEe
Q 042564 240 --------------------FD-DEMRAVVARNLEGRGINLHPRTTIKELIKSEEG---VKVITDHGE--EIVADVVLFA 293 (498)
Q Consensus 240 --------------------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~---~~v~~~~g~--~i~~D~vi~a 293 (498)
++ ..+.+.+.+.+++.|++++++++|+++..+++. +.+...+|+ ++.+|.||.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~A 167 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDA 167 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEEC
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEEC
Confidence 00 234455677777899999999999999987775 344455674 7999999999
Q ss_pred cCCCcCC
Q 042564 294 TGRAPNT 300 (498)
Q Consensus 294 ~G~~p~~ 300 (498)
+|..+..
T Consensus 168 dG~~S~v 174 (512)
T 3e1t_A 168 SGNRTRV 174 (512)
T ss_dssp CCTTCSS
T ss_pred CCcchHH
Confidence 9987654
No 270
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.92 E-value=1.8e-05 Score=80.84 Aligned_cols=101 Identities=19% Similarity=0.202 Sum_probs=74.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCCC---C----------CHHHHHHHHHHH-HhCCCEEEcCccE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPLRG---F----------DDEMRAVVARNL-EGRGINLHPRTTI 265 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l~~---~----------~~~~~~~l~~~l-~~~Gv~i~~~~~v 265 (498)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+..... + ..++.....+.+ +..|++++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 4899999999999999999986 8899999987643100 0 011111223445 3449999999999
Q ss_pred EEEEEeCCeEEEEE-CCCe--EEEcCEEEEecCCCcCCCC
Q 042564 266 KELIKSEEGVKVIT-DHGE--EIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 266 ~~i~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~~p~~~~ 302 (498)
..+..+++.+.+.. .+|+ ++.+|.+|+|+|.+|....
T Consensus 117 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~ 156 (480)
T 3cgb_A 117 TKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPE 156 (480)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCC
Confidence 99976666666665 4565 7999999999999887653
No 271
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.92 E-value=5.8e-05 Score=75.34 Aligned_cols=98 Identities=18% Similarity=0.233 Sum_probs=75.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCc-EEEEeeCCCCCCC-----CC----------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGST-VDLLFRKELPLRG-----FD---------------------------------- 241 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~-V~lv~~~~~~l~~-----~~---------------------------------- 241 (498)
.+|+|||+|+.|+.+|..|++.|.+ |+++++.+.+-+. +.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g~ 84 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSGA 84 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCCC
Confidence 4799999999999999999999999 9999987643110 00
Q ss_pred ----------------------HHHHHHHHHHHHhC-C-CEEEcCccEEEEEEeCCeEEEEECC---C--eEEEcCEEEE
Q 042564 242 ----------------------DEMRAVVARNLEGR-G-INLHPRTTIKELIKSEEGVKVITDH---G--EEIVADVVLF 292 (498)
Q Consensus 242 ----------------------~~~~~~l~~~l~~~-G-v~i~~~~~v~~i~~~~~~~~v~~~~---g--~~i~~D~vi~ 292 (498)
..+.+.+.+.+.+. | ++++++++|+++.. ++++.+++.+ | +++.+|.||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~ 163 (410)
T 3c96_A 85 TVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVG 163 (410)
T ss_dssp EEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEE
T ss_pred EEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEE
Confidence 13444556666553 5 68999999999987 5667777654 7 5799999999
Q ss_pred ecCCCcCC
Q 042564 293 ATGRAPNT 300 (498)
Q Consensus 293 a~G~~p~~ 300 (498)
|.|..+..
T Consensus 164 AdG~~S~v 171 (410)
T 3c96_A 164 ADGIHSAV 171 (410)
T ss_dssp CCCTTCHH
T ss_pred CCCccchh
Confidence 99987654
No 272
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.92 E-value=6.2e-06 Score=83.49 Aligned_cols=89 Identities=20% Similarity=0.196 Sum_probs=70.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC-------CCC--CCHHHHHHHHHHHHhCCCEEEcCccEEEEEEe
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP-------LRG--FDDEMRAVVARNLEGRGINLHPRTTIKELIKS 271 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~-------l~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 271 (498)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ ++. ++.++.....+.+++.||++++++.+..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~---- 197 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR---- 197 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc----
Confidence 468999999999999999999999999999998754 333 4677888888889999999999976631
Q ss_pred CCeEEEEECCCeEEEcCEEEEecCCCc
Q 042564 272 EEGVKVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 272 ~~~~~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
.+.++++ .+.+|.||+|+|..+
T Consensus 198 ----~v~~~~~-~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 198 ----DASLPEL-RRKHVAVLVATGVYK 219 (456)
T ss_dssp ----TBCHHHH-HSSCSEEEECCCCCE
T ss_pred ----EEEhhHh-HhhCCEEEEecCCCC
Confidence 1222222 256999999999863
No 273
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.91 E-value=7.3e-06 Score=86.27 Aligned_cols=58 Identities=24% Similarity=0.345 Sum_probs=42.5
Q ss_pred hCCCEEEcCccEEEEEEeCC--e-EEEEEC---CCe--EEEcCEEEEecCCCcCCCCCCcccCCce
Q 042564 254 GRGINLHPRTTIKELIKSEE--G-VKVITD---HGE--EIVADVVLFATGRAPNTKRLNLKAVGVE 311 (498)
Q Consensus 254 ~~Gv~i~~~~~v~~i~~~~~--~-~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~l~l~~~gi~ 311 (498)
+.|+++++++.|++|..+++ . ..|++. +|+ ++.+|.||+|+|..|+..+|.+...|..
T Consensus 272 ~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~ 337 (623)
T 3pl8_A 272 EERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQL 337 (623)
T ss_dssp EEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCC
T ss_pred CCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCcc
Confidence 34899999999999987643 2 344442 454 6889999999999999987544444444
No 274
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.90 E-value=4.2e-05 Score=78.51 Aligned_cols=98 Identities=11% Similarity=0.160 Sum_probs=68.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+..|..|++.|.+|+++++ .+ .+ +
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~------~~---~~---------l-------------------------- 212 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFAR------GN---RI---------L-------------------------- 212 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECS------SS---SS---------C--------------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEec------CC---cc---------C--------------------------
Confidence 5799999999999999999999999999993 11 10 0
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC---CEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP---NEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~---~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
+.++. .+...+.+.+++.||+++.++ +..++. +.+.+.+.+|+. .+.+|.||+|+|.+|+.
T Consensus 213 --~~~d~------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~-~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 213 --RKFDE------------SVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRI-YEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp --TTSCH------------HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCE-EEEESEEEECCCBCCTT
T ss_pred --cccch------------hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcE-EEECCEEEECCCCCcCC
Confidence 01110 111223455677899999886 555542 236777777752 38999999999999876
Q ss_pred C
Q 042564 180 A 180 (498)
Q Consensus 180 p 180 (498)
.
T Consensus 278 ~ 278 (500)
T 1onf_A 278 E 278 (500)
T ss_dssp T
T ss_pred C
Confidence 4
No 275
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.89 E-value=5.8e-05 Score=76.73 Aligned_cols=97 Identities=20% Similarity=0.081 Sum_probs=72.7
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC-------------------------------CCCH-HH------
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR-------------------------------GFDD-EM------ 244 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~-------------------------------~~~~-~~------ 244 (498)
+|+|||+|+.|+.+|..+++.|.+|+++++.+.+-. .++. .+
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKDY 85 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHHh
Confidence 699999999999999999999999999996654310 0111 01
Q ss_pred ----H--HHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeE--EEcCEEEEecCCCcCCCC
Q 042564 245 ----R--AVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEE--IVADVVLFATGRAPNTKR 302 (498)
Q Consensus 245 ----~--~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~--i~~D~vi~a~G~~p~~~~ 302 (498)
. ..+.+.+++.|++++.+ .+..+ +.+.+.|...+|++ +.+|.+|+|+|.+|....
T Consensus 86 ~~~l~~~~~~~~~~~~~~v~~~~g-~v~~i--d~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~ 148 (466)
T 3l8k_A 86 VQELRFKQHKRNMSQYETLTFYKG-YVKIK--DPTHVIVKTDEGKEIEAETRYMIIASGAETAKLR 148 (466)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEESE-EEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCEEECCCC
T ss_pred heeccccchHHHHHHhCCCEEEEe-EEEEe--cCCeEEEEcCCCcEEEEecCEEEECCCCCccCCC
Confidence 1 33444556679999887 56666 35567788888888 999999999999887654
No 276
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.89 E-value=9.8e-06 Score=80.23 Aligned_cols=41 Identities=27% Similarity=0.421 Sum_probs=36.5
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
++||+|||||++|+++|..|++.|.+|+|+|+ ...+||.|.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~---------~~~~GG~~~ 43 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQ---------RDHIGGNSY 43 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEES---------SSSSSGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEe---------cCCcCCccc
Confidence 37999999999999999999999999999995 466788873
No 277
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.89 E-value=3e-05 Score=78.88 Aligned_cols=100 Identities=22% Similarity=0.321 Sum_probs=68.0
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+..|..|++.|.+|+++++ .+ .+ +|
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~------~~---~~---------l~------------------------- 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEF------LP---RA---------LP------------------------- 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SS---------ST-------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEc------CC---cc---------cc-------------------------
Confidence 5899999999999999999999999999993 11 10 00
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC--CEEEEEeC-CCceEEEEcCeEEEcCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP--NEVEVTQL-DGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~--~~~~v~~~-~g~~~~~~~d~liiAtG~~p~~ 179 (498)
.++. .+...+.+.+++.||+++.++ +..++. +.+.+... +|+..++.+|.|++|+|.+|+.
T Consensus 209 ---~~~~------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 209 ---NEDA------------DVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp ---TSCH------------HHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred ---ccCH------------HHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 0110 011223344566799999875 445532 33555543 5544589999999999998876
Q ss_pred CC
Q 042564 180 AP 181 (498)
Q Consensus 180 p~ 181 (498)
..
T Consensus 274 ~~ 275 (464)
T 2a8x_A 274 EG 275 (464)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 278
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.88 E-value=7.1e-05 Score=78.05 Aligned_cols=98 Identities=18% Similarity=0.250 Sum_probs=75.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC---------------------------------------C--
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG---------------------------------------F-- 240 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~---------------------------------------~-- 240 (498)
-+|+|||+|..|+..|..+++.|.+|+++++.+.+... .
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 37999999999999999999999999999987632100 0
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeC-
Q 042564 241 -----------------------------------------------DDEMRAVVARNLEGRGINLHPRTTIKELIKSE- 272 (498)
Q Consensus 241 -----------------------------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~- 272 (498)
...+.+.+.+.+++.||++++++.|+++..++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 12244556677788899999999999998776
Q ss_pred Ce-EEEEE--CCCe--EEEcCEEEEecCCCcC
Q 042564 273 EG-VKVIT--DHGE--EIVADVVLFATGRAPN 299 (498)
Q Consensus 273 ~~-~~v~~--~~g~--~i~~D~vi~a~G~~p~ 299 (498)
+. ..|++ .+|+ ++.+|.||+|+|-...
T Consensus 282 g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 282 HSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp SBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 54 23443 4675 6889999999997654
No 279
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.87 E-value=1.3e-05 Score=82.02 Aligned_cols=42 Identities=26% Similarity=0.349 Sum_probs=36.8
Q ss_pred CCccEEEECCChhHHHHHHHHHhCC-CcEEEEccCCCCCCCCcCCCcccccc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFG-AKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g-~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
..+||+|||||++|+++|+.|++.| .+|+|+|+ ...+||.|.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~---------~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYEC---------NDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEES---------SSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeC---------CCCCCCeee
Confidence 4589999999999999999999998 79999995 456788764
No 280
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.86 E-value=2.1e-05 Score=79.32 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=71.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHCC--CcEEEEeeCCCCCC----------C--CCH--HHHHHHHHHHHhCCCEEEcCccEE
Q 042564 203 RAVVLGGGYIAVEFASIWRGMG--STVDLLFRKELPLR----------G--FDD--EMRAVVARNLEGRGINLHPRTTIK 266 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g--~~V~lv~~~~~~l~----------~--~~~--~~~~~l~~~l~~~Gv~i~~~~~v~ 266 (498)
+|+|||+|+.|+.+|..++++| .+|+++++.+...- . .+. .+.....+.+++.+++++.+++|.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 5999999999999999999887 47999998764210 0 000 011112344567799999999999
Q ss_pred EEEEeCCeEEEEEC---CCeEEEcCEEEEecCCCcCCCC
Q 042564 267 ELIKSEEGVKVITD---HGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 267 ~i~~~~~~~~v~~~---~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
.|..+.....+... ++.++.+|.+|+|||.+|+...
T Consensus 82 ~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~ 120 (437)
T 4eqs_A 82 AINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLG 120 (437)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCC
T ss_pred EEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccccc
Confidence 99776665555443 2346889999999999987654
No 281
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.86 E-value=9.2e-06 Score=82.91 Aligned_cols=50 Identities=22% Similarity=0.301 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCC
Q 042564 244 MRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGR 296 (498)
Q Consensus 244 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 296 (498)
+.+.+.+.+.+ ++|+++++|++|..+++++.|++.+| ++.+|.||+|++.
T Consensus 238 l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~ 287 (475)
T 3lov_A 238 LIERLEEVLER--SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPH 287 (475)
T ss_dssp HHHHHHHHCSS--CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCH
T ss_pred HHHHHHhhccC--CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCH
Confidence 44444444332 79999999999998888888888888 7999999999985
No 282
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.83 E-value=4.8e-05 Score=77.42 Aligned_cols=99 Identities=20% Similarity=0.295 Sum_probs=66.5
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+.+|..|++.|.+|+++++ .+ .+ .|
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~------~~---~~---------l~------------------------- 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEF------AP---RC---------AP------------------------- 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SS---------ST-------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEec------CC---cc---------cc-------------------------
Confidence 5899999999999999999999999999993 11 10 00
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHH-HhCCcEEEEeE-EEEEeC--CEEEEEeC--CCceEEEEcCeEEEcCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLL-SNAGVKLYEGE-GKIVGP--NEVEVTQL--DGTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~~~-~~~i~~--~~~~v~~~--~g~~~~~~~d~liiAtG~~p 177 (498)
.++. .+...+.+.+ ++.||+++.++ +..++. +.+.+... +|+..++.+|.||+|+|.+|
T Consensus 212 ---~~d~------------~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 212 ---TLDE------------DVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp ---TSCH------------HHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEE
T ss_pred ---cCCH------------HHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCccc
Confidence 0110 0122334455 67899999875 555543 23555543 55335799999999999988
Q ss_pred CCC
Q 042564 178 QRA 180 (498)
Q Consensus 178 ~~p 180 (498)
+..
T Consensus 277 ~~~ 279 (468)
T 2qae_A 277 FTG 279 (468)
T ss_dssp CCT
T ss_pred CCC
Confidence 764
No 283
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.81 E-value=5.2e-05 Score=77.59 Aligned_cols=97 Identities=16% Similarity=0.227 Sum_probs=69.2
Q ss_pred ccEEEECCChhHHHHHHHHHhC---CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 24 FDLFVIGAGSGGVRAARFSANF---GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~---g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
.+++|||||+.|+..|..|++. |.+|+++++ .+ .+ +|
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~------~~---~~---------l~---------------------- 227 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYR------GD---MI---------LR---------------------- 227 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEES------SS---SS---------ST----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEc------CC---Cc---------cc----------------------
Confidence 5899999999999999999998 999999993 11 10 00
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC---CEEEEEeCCCceEEEEcCeEEEcCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP---NEVEVTQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~---~~~~v~~~~g~~~~~~~d~liiAtG~~ 176 (498)
.++. .+...+.+.+++.||+++.++ +..++. ..+.|.+.+|+ ++.+|.||+|+|.+
T Consensus 228 ------~~d~------------~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~--~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 228 ------GFDS------------ELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGA--EADYDVVMLAIGRV 287 (490)
T ss_dssp ------TSCH------------HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSC--EEEESEEEECSCEE
T ss_pred ------ccCH------------HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCc--EEEcCEEEEccCCC
Confidence 1110 112233455667899999985 555532 24677777775 79999999999998
Q ss_pred CCCC
Q 042564 177 AQRA 180 (498)
Q Consensus 177 p~~p 180 (498)
|+..
T Consensus 288 p~~~ 291 (490)
T 1fec_A 288 PRSQ 291 (490)
T ss_dssp ESCT
T ss_pred cCcc
Confidence 8764
No 284
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.81 E-value=6.9e-05 Score=76.28 Aligned_cols=98 Identities=14% Similarity=0.094 Sum_probs=72.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC-------------------------------------CCH-H
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG-------------------------------------FDD-E 243 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~-------------------------------------~~~-~ 243 (498)
.+|+|||+|+.|+.+|..+++.|.+|+++++.+.+-.. ++. .
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAA 86 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 57999999999999999999999999999997643110 010 0
Q ss_pred -----------HHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCC--eEEEcCEEEEecCCCcCCCC
Q 042564 244 -----------MRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHG--EEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 244 -----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~~ 302 (498)
+.+.+.+.+++.|++++.++.+. + +.+.+.+.+.+| +++.+|.+|+|+|.+|....
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~ 155 (470)
T 1dxl_A 87 MMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SPSEISVDTIEGENTVVKGKHIIIATGSDVKSLP 155 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ETTEEEECCSSSCCEEEECSEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCC
Confidence 11123455667799999987553 3 455667777777 68999999999999887643
No 285
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.81 E-value=0.00013 Score=74.24 Aligned_cols=99 Identities=24% Similarity=0.331 Sum_probs=71.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC----------------------------C----CC----CCC-HH
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL----------------------------P----LR----GFD-DE 243 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~----------------------------~----l~----~~~-~~ 243 (498)
..+|+|||+|+.|+.+|..+++.|.+|+++++... . ++ ..+ ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSK 83 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHHH
Confidence 35899999999999999999999999999998730 0 10 011 11
Q ss_pred HHH-------H-----HHHHHHhC-CCEEEcCccEEEEEEeCCeEEEEECCC--eEEEcCEEEEecCCCcCCCC
Q 042564 244 MRA-------V-----VARNLEGR-GINLHPRTTIKELIKSEEGVKVITDHG--EEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 244 ~~~-------~-----l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~~ 302 (498)
+.. . ..+.+++. ||+++.+. +..+ +.+.+.+.+.+| +++.+|.+|+|||.+|....
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~ 154 (467)
T 1zk7_A 84 LLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFK--DDQSLTVRLNEGGERVVMFDRCLVATGASPAVPP 154 (467)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEE--ETTEEEEEETTSSEEEEECSEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEc--cCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCC
Confidence 211 1 22445566 89998873 5555 345677878888 67999999999999887654
No 286
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.81 E-value=5.5e-05 Score=77.53 Aligned_cols=97 Identities=20% Similarity=0.307 Sum_probs=68.9
Q ss_pred ccEEEECCChhHHHHHHHHHhC---CCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCc
Q 042564 24 FDLFVIGAGSGGVRAARFSANF---GAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGW 100 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~---g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~ 100 (498)
.+++|||||+.|+..|..|++. |.+|+++++ .+ .+ +|
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~------~~---~~---------l~---------------------- 231 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYR------NN---LI---------LR---------------------- 231 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEES------SS---SS---------CT----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEc------CC---cc---------cc----------------------
Confidence 5799999999999999999998 999999993 11 10 00
Q ss_pred ccccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC---CEEEEEeCCCceEEEEcCeEEEcCCCC
Q 042564 101 EVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP---NEVEVTQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~---~~~~v~~~~g~~~~~~~d~liiAtG~~ 176 (498)
.++. .+...+.+.+++.||+++.++ +..++. ..+.|.+.+|+ ++.+|.||+|+|.+
T Consensus 232 ------~~d~------------~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~--~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 232 ------GFDE------------TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGK--TLDVDVVMMAIGRI 291 (495)
T ss_dssp ------TSCH------------HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSC--EEEESEEEECSCEE
T ss_pred ------ccCH------------HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCc--EEEcCEEEECCCCc
Confidence 1111 111223445667899999985 555532 23677777775 79999999999998
Q ss_pred CCCC
Q 042564 177 AQRA 180 (498)
Q Consensus 177 p~~p 180 (498)
|+..
T Consensus 292 p~~~ 295 (495)
T 2wpf_A 292 PRTN 295 (495)
T ss_dssp ECCG
T ss_pred cccc
Confidence 8764
No 287
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.81 E-value=1.3e-05 Score=82.36 Aligned_cols=52 Identities=15% Similarity=0.336 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCe----EEEcCEEEEecCCC
Q 042564 243 EMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGE----EIVADVVLFATGRA 297 (498)
Q Consensus 243 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~----~i~~D~vi~a~G~~ 297 (498)
.+.+.+.+.+.. +++++++|++|..+++++.|++.+|+ ++.+|.||++++..
T Consensus 242 ~l~~~l~~~l~~---~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD---KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG---GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc---ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 455666665544 78999999999988778888876664 58999999999854
No 288
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.81 E-value=0.00016 Score=75.36 Aligned_cols=98 Identities=21% Similarity=0.290 Sum_probs=74.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCC---------------------------------------C--
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG---------------------------------------F-- 240 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~---------------------------------------~-- 240 (498)
.+|+|||+|..|+..|..+.+.|.+|+++++.+.+... .
T Consensus 127 ~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNINDP 206 (572)
T ss_dssp CSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 48999999999999999999999999999987632100 0
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeC-
Q 042564 241 -----------------------------------------------DDEMRAVVARNLEGRGINLHPRTTIKELIKSE- 272 (498)
Q Consensus 241 -----------------------------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~- 272 (498)
...+...+.+.+++.||++++++.|.++..++
T Consensus 207 ~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~ 286 (572)
T 1d4d_A 207 ELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS 286 (572)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--
T ss_pred HHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCC
Confidence 11344556677788899999999999997665
Q ss_pred Ce-EEEEE--CCCe--EEEcCEEEEecCCCcC
Q 042564 273 EG-VKVIT--DHGE--EIVADVVLFATGRAPN 299 (498)
Q Consensus 273 ~~-~~v~~--~~g~--~i~~D~vi~a~G~~p~ 299 (498)
+. ..|.+ .+|+ ++.+|.||+|+|..++
T Consensus 287 g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 287 GKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 43 33443 3665 6889999999997664
No 289
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=4.7e-05 Score=77.74 Aligned_cols=97 Identities=15% Similarity=0.205 Sum_probs=67.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+..|..|++.|.+|+++++ .+ .+ .|
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~------~~---~~---------l~------------------------- 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIR------GE---TV---------LR------------------------- 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECS------SS---SS---------CT-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEe------CC---cc---------cc-------------------------
Confidence 5799999999999999999999999999993 11 10 00
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC--CE--EEEEeCCCceEEEEcCeEEEcCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP--NE--VEVTQLDGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~--~~--~~v~~~~g~~~~~~~d~liiAtG~~p~ 178 (498)
.++. .+...+.+.+++.||+++.++ +..++. +. +.|.+.+|+ .++.+|.||+|+|.+|+
T Consensus 223 ---~~d~------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~-~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 223 ---KFDE------------CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSK-SIDDVDELIWTIGRKSH 286 (479)
T ss_dssp ---TSCH------------HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSC-EEEEESEEEECSCEEEC
T ss_pred ---ccCH------------HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCc-EEEEcCEEEECCCCCCc
Confidence 0110 011123344566799999885 555542 22 667777772 48999999999999887
Q ss_pred C
Q 042564 179 R 179 (498)
Q Consensus 179 ~ 179 (498)
.
T Consensus 287 ~ 287 (479)
T 2hqm_A 287 L 287 (479)
T ss_dssp C
T ss_pred c
Confidence 6
No 290
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.80 E-value=2e-05 Score=80.87 Aligned_cols=100 Identities=17% Similarity=0.226 Sum_probs=71.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC-----C-----CCCH-HHHHHHHHHH--HhCCCEEEcCccEEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL-----R-----GFDD-EMRAVVARNL--EGRGINLHPRTTIKEL 268 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l-----~-----~~~~-~~~~~l~~~l--~~~Gv~i~~~~~v~~i 268 (498)
++|+|||+|+.|+.+|..|.+.+.+|++|++.+..+ + .+++ ++...+.+.+ ...+++++.. ++++|
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~I 121 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATSI 121 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEEE
Confidence 489999999999999999998899999999876421 1 1121 1222233333 2347888765 78888
Q ss_pred EEeCCeEEEEE------------------CCCeEEEcCEEEEecCCCcCCCC
Q 042564 269 IKSEEGVKVIT------------------DHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 269 ~~~~~~~~v~~------------------~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
..+.+.+.+.. .++.++++|.+|+|+|.+|+...
T Consensus 122 D~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ 173 (502)
T 4g6h_A 122 NPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFG 173 (502)
T ss_dssp EGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTT
T ss_pred EhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCC
Confidence 77666655432 34668999999999999998764
No 291
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.80 E-value=5.8e-05 Score=76.92 Aligned_cols=98 Identities=14% Similarity=0.054 Sum_probs=71.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC--------------------------------------CCCH-
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR--------------------------------------GFDD- 242 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~--------------------------------------~~~~- 242 (498)
.+++|||+|+.|+.+|..+++.|.+|+++++.+.+-. ..+.
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 86 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLD 86 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCHH
Confidence 4799999999999999999999999999999763200 0010
Q ss_pred H-----------HHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECC-C-eEEEcCEEEEecCCCcCCCC
Q 042564 243 E-----------MRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDH-G-EEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 243 ~-----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~-g-~~i~~D~vi~a~G~~p~~~~ 302 (498)
. +...+.+.+++.||+++.++.+ .+ +.+.+.|.+.+ + +++.+|.+|+|||.+|....
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~ 156 (474)
T 1zmd_A 87 KMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-IT--GKNQVTATKADGGTQVIDTKNILIATGSEVTPFP 156 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EE--ETTEEEEECTTSCEEEEEEEEEEECCCEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCC
Confidence 1 1112355677789999988543 33 45567777776 4 57999999999999887653
No 292
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.78 E-value=0.00021 Score=74.71 Aligned_cols=99 Identities=21% Similarity=0.300 Sum_probs=76.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC------CCcEEEEeeCCCCCCC------------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM------GSTVDLLFRKELPLRG------------------------------------ 239 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~------g~~V~lv~~~~~~l~~------------------------------------ 239 (498)
-+|+|||+|+.|+-+|..|++. |.+|.++++.+.+-..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999986432100
Q ss_pred ---------C---C--------------HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe-E-EEEEC------CC---
Q 042564 240 ---------F---D--------------DEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-V-KVITD------HG--- 282 (498)
Q Consensus 240 ---------~---~--------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~------~g--- 282 (498)
+ + ..+.+.+.+.+++.||++++++.+.++..++++ + .|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 0 0 145566778888889999999999999876643 3 36665 33
Q ss_pred ------eEEEcCEEEEecCCCcCC
Q 042564 283 ------EEIVADVVLFATGRAPNT 300 (498)
Q Consensus 283 ------~~i~~D~vi~a~G~~p~~ 300 (498)
.++.+|.||.|.|..+..
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCHH
T ss_pred cccCCceEEECCEEEEeeCCCchH
Confidence 579999999999998753
No 293
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.77 E-value=6e-05 Score=77.37 Aligned_cols=97 Identities=23% Similarity=0.311 Sum_probs=68.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+..|..+++.|.+|+++++ .+ .+ +
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~------~~---~~---------l-------------------------- 218 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVAS------QD---HV---------L-------------------------- 218 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECS------SS---SS---------S--------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEc------CC---cc---------c--------------------------
Confidence 5799999999999999999999999999993 11 10 0
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC--CEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP--NEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~--~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
+.++. .+...+.+.+++.||+++.++ +..++. +.+.+...+|+ ++.+|.||+|+|.+|+..
T Consensus 219 --~~~d~------------~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~--~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 219 --PYEDA------------DAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGR--TVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp --CCSSH------------HHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSC--EEEESEEEECCCEEECCS
T ss_pred --cccCH------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCc--EEEcCEEEECCCCCcCCC
Confidence 00111 112223445677899999875 555532 34667666664 799999999999988764
No 294
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.76 E-value=5.9e-05 Score=77.89 Aligned_cols=98 Identities=14% Similarity=0.193 Sum_probs=68.7
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||..|+..|..+++.|.+|+++++ .+ .+ .|
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~------~~---~~---------l~------------------------- 251 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVR------TE---PL---------KL------------------------- 251 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SC---TT---------TT-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEe------cC---cc---------cc-------------------------
Confidence 6899999999999999999999999999993 11 10 00
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC--CE----EEEEeCCCceEEEEcCeEEEcCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP--NE----VEVTQLDGTKLSYSAKHILIATGSR 176 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~--~~----~~v~~~~g~~~~~~~d~liiAtG~~ 176 (498)
.++. .+...+.+.+++.|++++.++ +..++. +. +.|.+.+|+ .++.+|.||+|+|.+
T Consensus 252 ---~~~~------------~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~-~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 252 ---IKDN------------ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGE-MRIETDFVFLGLGEQ 315 (523)
T ss_dssp ---CCSH------------HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEE-EEEECSCEEECCCCE
T ss_pred ---cccH------------HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCc-EEEEcCEEEECcCCc
Confidence 0110 112223455667899999885 555532 33 667776652 378999999999998
Q ss_pred CCCC
Q 042564 177 AQRA 180 (498)
Q Consensus 177 p~~p 180 (498)
|+..
T Consensus 316 p~~~ 319 (523)
T 1mo9_A 316 PRSA 319 (523)
T ss_dssp ECCH
T ss_pred cCCc
Confidence 8764
No 295
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.75 E-value=0.00016 Score=73.85 Aligned_cols=97 Identities=18% Similarity=0.103 Sum_probs=70.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC----------------------------------C--CCCH-H-
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL----------------------------------R--GFDD-E- 243 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l----------------------------------~--~~~~-~- 243 (498)
.+|+|||+|+.|+.+|..+++.|.+|+++++.+.+- . .++. .
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~~ 86 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDML 86 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 379999999999999999999999999999854321 0 0111 1
Q ss_pred ----------HHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCC------------eEEEcCEEEEecCCCcCCC
Q 042564 244 ----------MRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHG------------EEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 244 ----------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g------------~~i~~D~vi~a~G~~p~~~ 301 (498)
+.+.+.+.+++.|++++.++.+. .+.+.+.+.+.+| .++.+|.+|+|+|.+|...
T Consensus 87 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~ 163 (482)
T 1ojt_A 87 RAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKL 163 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCC
Confidence 11123456677899999886543 2445566665555 5799999999999998764
No 296
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.75 E-value=9.5e-05 Score=76.25 Aligned_cols=96 Identities=22% Similarity=0.198 Sum_probs=69.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+-.|..+++.|.+|+|+++ ..+ +
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~----------~~~---------L-------------------------- 258 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVR----------SIV---------L-------------------------- 258 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEES----------SCS---------S--------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecc----------ccc---------c--------------------------
Confidence 5799999999999999999999999999983 110 0
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEE--EeCCEEEEEeCCCceEEEEcCeEEEcCCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKI--VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRA 180 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~--i~~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~p 180 (498)
+.+|. ++...+...+++.|+.++.+. +.. -..+.+.|...++. .+.+|.|++|+|-+|+..
T Consensus 259 --~~~D~------------ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~--~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 259 --RGFDQ------------QCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKT--SELYDTVLYAIGRKGDID 322 (542)
T ss_dssp --TTSCH------------HHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSC--EEEESEEEECSCEEESCG
T ss_pred --cccch------------hHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCC--eEEEEEEEEcccccCCcc
Confidence 11111 112233455677899999886 333 24567777777765 778999999999888764
No 297
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.74 E-value=0.00016 Score=73.91 Aligned_cols=95 Identities=18% Similarity=0.125 Sum_probs=68.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC----------------------------C---------CC---
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR----------------------------G---------FD--- 241 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~----------------------------~---------~~--- 241 (498)
.+|+|||+|+.|+.+|..+++.|.+|+++++.+.+-. . ++
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 105 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNLQK 105 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCHHH
Confidence 5799999999999999999999999999998654310 0 00
Q ss_pred ---------HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCC--eEEEcCEEEEecCCCcC
Q 042564 242 ---------DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHG--EEIVADVVLFATGRAPN 299 (498)
Q Consensus 242 ---------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~ 299 (498)
..+...+...+++.+++++.+.... .+.+.+.+...+| +++.+|.+|+|||.+|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~ 171 (491)
T 3urh_A 106 MMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV---LGQGKVSVTNEKGEEQVLEAKNVVIATGSDVA 171 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---CSSSEEEEECTTSCEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ecCCEEEEEeCCCceEEEEeCEEEEccCCCCC
Confidence 0111223455677899988774322 2445577777777 57999999999998874
No 298
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.72 E-value=8.9e-05 Score=75.89 Aligned_cols=99 Identities=20% Similarity=0.184 Sum_probs=66.3
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+.+|..|++.|.+|+++++ .+ .+.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~------~~---~~l----------------------------------- 210 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGR------SG---SVA----------------------------------- 210 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECC------TT---CCT-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEE------CC---ccc-----------------------------------
Confidence 5899999999999999999999999999993 11 100
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEE--eCCEEEEEeC--CCceEEEEcCeEEEcCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIV--GPNEVEVTQL--DGTKLSYSAKHILIATGSRAQ 178 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i--~~~~~~v~~~--~g~~~~~~~d~liiAtG~~p~ 178 (498)
+.++. .+...+.+.+++. |+++.++ +..+ +.+.+.+... +|+..++.+|.|++|+|.+|+
T Consensus 211 --~~~d~------------~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 211 --NLQDE------------EMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp --TCCCH------------HHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred --ccCCH------------HHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 00110 1112233344555 8888765 4444 3345556553 564468999999999999887
Q ss_pred CCC
Q 042564 179 RAP 181 (498)
Q Consensus 179 ~p~ 181 (498)
...
T Consensus 276 ~~~ 278 (492)
T 3ic9_A 276 VDK 278 (492)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 299
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.71 E-value=2.6e-05 Score=79.49 Aligned_cols=54 Identities=20% Similarity=0.201 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhC--------CCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCC
Q 042564 243 EMRAVVARNLEGR--------GINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGR 296 (498)
Q Consensus 243 ~~~~~l~~~l~~~--------Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 296 (498)
.+.+.+.+.+.+. |.+++++++|++|..+++++.|++.+|+++.+|.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 4556666665544 67899999999999888888899999989999999999985
No 300
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.70 E-value=7.7e-05 Score=74.36 Aligned_cols=96 Identities=23% Similarity=0.289 Sum_probs=70.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCC-----------CC--CC-C-------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKEL-----------PL--RG-F------------------------- 240 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~-----------~l--~~-~------------------------- 240 (498)
.+|+|||+|.+|+-+|..|++. |.+|+++++... .+ +. +
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKTL 116 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCCC
Confidence 4799999999999999999999 999999997531 01 00 0
Q ss_pred ----------------------------C--------------------------HHHHHHHHHHHHhCCCEEEcCccEE
Q 042564 241 ----------------------------D--------------------------DEMRAVVARNLEGRGINLHPRTTIK 266 (498)
Q Consensus 241 ----------------------------~--------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~ 266 (498)
. ..+.+.+.+.+++.|++++++++|.
T Consensus 117 ~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~ 196 (405)
T 3c4n_A 117 EVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAE 196 (405)
T ss_dssp CEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEE
T ss_pred cEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 0 1255567777888899999999999
Q ss_pred ---------EEEEeCCeEEEEECCCeEEEcCEEEEecCCCc
Q 042564 267 ---------ELIKSEEGVKVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 267 ---------~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
++..+++.+.|.+.+| ++.+|.||+|+|...
T Consensus 197 ~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 197 LVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp EETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred eccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 8866555565666666 799999999999764
No 301
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.69 E-value=3.4e-05 Score=79.08 Aligned_cols=99 Identities=21% Similarity=0.218 Sum_probs=73.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC----------CC---CHHHHHHHHHHHHhCCCEEEcCccEEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR----------GF---DDEMRAVVARNLEGRGINLHPRTTIKEL 268 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~----------~~---~~~~~~~l~~~l~~~Gv~i~~~~~v~~i 268 (498)
.+|+|||+|+.|+.+|..|++. .+|+++++.+.+-. .+ ..++...+.+.+ +.|+++++++.+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 4799999999999999999999 99999998775411 11 123333444444 569999999999888
Q ss_pred EEeCCeEEEEE-CCCe--EEEcCEEEEecCCCcCCCC
Q 042564 269 IKSEEGVKVIT-DHGE--EIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 269 ~~~~~~~~v~~-~~g~--~i~~D~vi~a~G~~p~~~~ 302 (498)
..+++.+.+.. .+++ .+.+|.+|+|+|..|....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~ 223 (493)
T 1y56_A 187 FDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTML 223 (493)
T ss_dssp EECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCC
T ss_pred EcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCC
Confidence 77665544433 4554 6899999999999887643
No 302
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.68 E-value=3e-05 Score=79.42 Aligned_cols=97 Identities=22% Similarity=0.330 Sum_probs=69.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC------CC---CCH--HHHHH--------------------H
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPL------RG---FDD--EMRAV--------------------V 248 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l------~~---~~~--~~~~~--------------------l 248 (498)
.+++|||+|+.|+.+|..|++. +.+|+++++.+.+. +. ... ..... +
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFY 91 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGGS
T ss_pred CCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHhh
Confidence 4799999999999999998876 88999999876431 00 000 00000 0
Q ss_pred H--HH---HHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 249 A--RN---LEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 249 ~--~~---l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
. +. +.+.||++++++.|.++..+.. .|.+.+|+++.+|.+|+|||.+|..
T Consensus 92 ~~~~~l~~~~~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 92 VSAQDLPHIENGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp BCTTTTTTSTTCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEECC
T ss_pred cchhhhhhhhcCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCCC
Confidence 0 00 1245899999999999875543 5777889899999999999998864
No 303
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.67 E-value=0.00019 Score=73.16 Aligned_cols=99 Identities=24% Similarity=0.307 Sum_probs=67.3
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+..|..|++.|.+|+++++ .+ .+ +
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~------~~---~~---------l-------------------------- 216 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEA------MD---KF---------L-------------------------- 216 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEES------SS---SS---------S--------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEec------CC---Cc---------C--------------------------
Confidence 5799999999999999999999999999993 11 10 0
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEeCCCc-eEEEEcCeEEEcCCCCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQLDGT-KLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~~~g~-~~~~~~d~liiAtG~~p~~ 179 (498)
+.++. .+...+.+.+++.||+++.++ +..++ .+.+.+...++. ...+.+|.||+|+|.+|+.
T Consensus 217 --~~~~~------------~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 217 --PAVDE------------QVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp --TTSCH------------HHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred --cccCH------------HHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 00110 112223445667899999885 44443 334555544321 3578999999999988876
Q ss_pred C
Q 042564 180 A 180 (498)
Q Consensus 180 p 180 (498)
.
T Consensus 283 ~ 283 (476)
T 3lad_A 283 T 283 (476)
T ss_dssp T
T ss_pred C
Confidence 4
No 304
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.66 E-value=1.3e-05 Score=81.18 Aligned_cols=90 Identities=11% Similarity=0.107 Sum_probs=69.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCC--CcEEEEeeCCCCC--------CCC--CHHHHHHHHHHHHhCCCEEEcCccEEE
Q 042564 200 LPKRAVVLGGGYIAVEFASIWRGMG--STVDLLFRKELPL--------RGF--DDEMRAVVARNLEGRGINLHPRTTIKE 267 (498)
Q Consensus 200 ~~~~v~ViG~G~~g~e~a~~l~~~g--~~V~lv~~~~~~l--------~~~--~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 267 (498)
.+++|+|||+|+.|+.+|..|.+.| .+|+++++.+.+. +.+ ..++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 4578999999999999999999988 8999999987654 322 23566777788888999999987662
Q ss_pred EEEeCCeEEEEECCCeEEEcCEEEEecCCCc
Q 042564 268 LIKSEEGVKVITDHGEEIVADVVLFATGRAP 298 (498)
Q Consensus 268 i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 298 (498)
.. |.+.+. .+.+|.||+|||..|
T Consensus 84 -----~~--V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 -----RD--VTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp -----TT--BCHHHH-HHHSSEEEECCCCCE
T ss_pred -----eE--EEeccc-eEEcCEEEEecCcCC
Confidence 11 333332 368999999999885
No 305
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.65 E-value=0.00035 Score=71.63 Aligned_cols=56 Identities=20% Similarity=0.099 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEE---CCCe--EEEcCEEEEecCCCcC
Q 042564 244 MRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT---DHGE--EIVADVVLFATGRAPN 299 (498)
Q Consensus 244 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~---~~g~--~i~~D~vi~a~G~~p~ 299 (498)
+...+.+.+++.|++++.+++|+++..+++...|.+ .+|+ ++.+|.||.|+|....
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 445566777788999999999999988776566666 3565 6899999999997643
No 306
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.64 E-value=0.0002 Score=73.04 Aligned_cols=99 Identities=22% Similarity=0.203 Sum_probs=67.1
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+..|..|++.|.+|+++++ .+ .+ +|
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~------~~---~~---------l~------------------------- 224 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIR------HD---KV---------LR------------------------- 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SS---------CT-------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEe------CC---cc---------cc-------------------------
Confidence 5899999999999999999999999999993 11 10 00
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC---C-EEEEEeCC---Cce--EEEEcCeEEEcC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP---N-EVEVTQLD---GTK--LSYSAKHILIAT 173 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~---~-~~~v~~~~---g~~--~~~~~d~liiAt 173 (498)
.++. .+...+.+.+++.||+++.++ +..++. . .+.+...+ |+. ..+.+|.|++|+
T Consensus 225 ---~~d~------------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~ 289 (478)
T 3dk9_A 225 ---SFDS------------MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAI 289 (478)
T ss_dssp ---TSCH------------HHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECS
T ss_pred ---ccCH------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEee
Confidence 0110 011223445667899999875 444432 2 35565544 221 578999999999
Q ss_pred CCCCCCC
Q 042564 174 GSRAQRA 180 (498)
Q Consensus 174 G~~p~~p 180 (498)
|.+|+..
T Consensus 290 G~~p~~~ 296 (478)
T 3dk9_A 290 GRVPNTK 296 (478)
T ss_dssp CEEESCT
T ss_pred ccccCCC
Confidence 9888765
No 307
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.62 E-value=0.00032 Score=71.71 Aligned_cols=98 Identities=18% Similarity=0.255 Sum_probs=66.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+..|..|++.|.+|+++++ ..+ +|
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~----------~~~---------l~------------------------- 221 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMR----------SIP---------LR------------------------- 221 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEES----------SCS---------ST-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEc----------Ccc---------cc-------------------------
Confidence 4799999999999999999999999999993 110 00
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEE---eCCEEEEEeCC---CceEEEEcCeEEEcCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIV---GPNEVEVTQLD---GTKLSYSAKHILIATGSR 176 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i---~~~~~~v~~~~---g~~~~~~~d~liiAtG~~ 176 (498)
.++. .+...+...+++.||+++.++ +..+ +.+.+.+...+ |+..++.+|.|++|+|..
T Consensus 222 ---~~d~------------~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 222 ---GFDQ------------QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp ---TSCH------------HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred ---cCCH------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 0110 112223455677899999885 4444 23444454422 444468999999999988
Q ss_pred CCCC
Q 042564 177 AQRA 180 (498)
Q Consensus 177 p~~p 180 (498)
|+..
T Consensus 287 p~~~ 290 (488)
T 3dgz_A 287 PETR 290 (488)
T ss_dssp ESCG
T ss_pred cccC
Confidence 8764
No 308
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.62 E-value=0.00066 Score=70.24 Aligned_cols=54 Identities=19% Similarity=0.271 Sum_probs=43.4
Q ss_pred HHHHHHHHhCCCEEEcCccEEEEEEeCCe--EEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 246 AVVARNLEGRGINLHPRTTIKELIKSEEG--VKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 246 ~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
+.+.+.+++.|++++.+ .|.++..++++ ..|.+.+|+++.+|.||.|+|..+..
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 34556666789999999 89999875543 57788888889999999999997765
No 309
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.59 E-value=0.00016 Score=73.83 Aligned_cols=99 Identities=19% Similarity=0.325 Sum_probs=68.9
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
..+++|||+|+.|+..|..+++.|.+|+++++ .+ .+ +|
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~------~~---~~---------l~------------------------ 228 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHR------GD---LI---------LR------------------------ 228 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SS---------ST------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEEC------CC---cc---------cc------------------------
Confidence 35899999999999999999999999999993 11 10 00
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe--CCEEEEEeCCCceEEEEcCeEEEcCCCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG--PNEVEVTQLDGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~--~~~~~v~~~~g~~~~~~~d~liiAtG~~p~~ 179 (498)
.++. .+...+.+.+++.|++++.++ +..++ .+.+.|.+.+|+ ++.+|.||+|+|.+|..
T Consensus 229 ----~~~~------------~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~--~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 229 ----NFDY------------DLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQ--TICADRVMLATGRVPNT 290 (484)
T ss_dssp ----TSCH------------HHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSC--EEEESEEEECCCEEECC
T ss_pred ----ccCH------------HHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCc--EEEcCEEEEeeCCCcCC
Confidence 0110 111223444566799999865 44443 345677777775 79999999999988876
Q ss_pred CC
Q 042564 180 AP 181 (498)
Q Consensus 180 p~ 181 (498)
..
T Consensus 291 ~~ 292 (484)
T 3o0h_A 291 TG 292 (484)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 310
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.58 E-value=0.00048 Score=66.22 Aligned_cols=158 Identities=19% Similarity=0.212 Sum_probs=98.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCC--------------------------------------CCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPLR--------------------------------------GFD 241 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l~--------------------------------------~~~ 241 (498)
-+|+|||+|+.|+.+|..|++. |.+|.++++.+.+-. ...
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 4799999999999999999997 999999998753210 012
Q ss_pred HHHHHHHHHHHHh-CCCEEEcCccEEEEEEeCC-------------------e-EEEEE------C--------CCeEEE
Q 042564 242 DEMRAVVARNLEG-RGINLHPRTTIKELIKSEE-------------------G-VKVIT------D--------HGEEIV 286 (498)
Q Consensus 242 ~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~-------------------~-~~v~~------~--------~g~~i~ 286 (498)
.++.+.+.+.+.+ .|++++.++.+.++..+++ . ..|.. . +..++.
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 3444666677777 5999999999999876542 2 22322 1 234799
Q ss_pred cCEEEEecCCCcCCCCC---CcccCCceeCCCCC--eEcCC-------CCCCCCCCeEEecccCC----C--CCChHHH-
Q 042564 287 ADVVLFATGRAPNTKRL---NLKAVGVEVDQTGA--VKVDE-------NSRTNVPSIWAVGDVTN----R--MNLTPVA- 347 (498)
Q Consensus 287 ~D~vi~a~G~~p~~~~l---~l~~~gi~~~~~g~--i~vd~-------~~~t~~~~iya~GD~~~----~--~~~~~~A- 347 (498)
++.||.|+|......-. .+...++.-.-.|. .+.+. +-+--+|++|++|=.+. . ......+
T Consensus 240 Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~~g~~rmgp~fg~m 319 (344)
T 3jsk_A 240 APVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEIDGANRMGPTFGAM 319 (344)
T ss_dssp CSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHHHTCEECCSCCHHH
T ss_pred cCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhhcCCCCCCccccee
Confidence 99999999987663211 01222222000111 11111 11113699999996653 1 1122233
Q ss_pred HHHHHHHHHHHh
Q 042564 348 LMEGTCFAKTVF 359 (498)
Q Consensus 348 ~~~g~~aa~~i~ 359 (498)
+.+|+.+|+.++
T Consensus 320 ~~sg~~~a~~~~ 331 (344)
T 3jsk_A 320 ALSGVKAAHEAI 331 (344)
T ss_dssp HHHHHHHHHHHH
T ss_pred eecCHHHHHHHH
Confidence 467888888775
No 311
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.57 E-value=6.5e-05 Score=79.82 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=35.2
Q ss_pred CCEEEcCccEEEEEEeCCeEEEEECC------CeEEEcCEEEEecC
Q 042564 256 GINLHPRTTIKELIKSEEGVKVITDH------GEEIVADVVLFATG 295 (498)
Q Consensus 256 Gv~i~~~~~v~~i~~~~~~~~v~~~~------g~~i~~D~vi~a~G 295 (498)
+++++++++|++|..+++++.|++.+ ++++.||.||+++.
T Consensus 410 ~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP 455 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 455 (662)
T ss_dssp TCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCC
T ss_pred cCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCC
Confidence 67999999999999988888888755 56899999999987
No 312
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.54 E-value=5.4e-05 Score=74.81 Aligned_cols=31 Identities=29% Similarity=0.332 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHHhC--CCcEEEEcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANF--GAKVGICEL 54 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~lvek 54 (498)
.||+|||||++|+++|+.|++. |.+|+|+|+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~ 33 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEK 33 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 3899999999999999999998 999999995
No 313
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.53 E-value=0.001 Score=63.58 Aligned_cols=157 Identities=18% Similarity=0.193 Sum_probs=97.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCCCC--------------------------------------CC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPLRG--------------------------------------FD 241 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l~~--------------------------------------~~ 241 (498)
-+|+|||+|+.|+.+|..|.+. |.+|+++++.+.+... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 3799999999999999999998 9999999986543100 12
Q ss_pred HHHHHHHHHHHHhC-CCEEEcCccEEEEEEeC----C--e-EEEEEC--------------CCeEEEc------------
Q 042564 242 DEMRAVVARNLEGR-GINLHPRTTIKELIKSE----E--G-VKVITD--------------HGEEIVA------------ 287 (498)
Q Consensus 242 ~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~----~--~-~~v~~~--------------~g~~i~~------------ 287 (498)
.++...+.+.+.+. |++++.++.|.++..++ + . ..+.+. ++.++.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 34455566666664 99999999999997763 2 2 233321 3357899
Q ss_pred ---CEEEEecCCCcCCCCCCcccCCceeCCCC------Ce--------EcCCCCC-CCCCCeEEecccCC----C--CCC
Q 042564 288 ---DVVLFATGRAPNTKRLNLKAVGVEVDQTG------AV--------KVDENSR-TNVPSIWAVGDVTN----R--MNL 343 (498)
Q Consensus 288 ---D~vi~a~G~~p~~~~l~l~~~gi~~~~~g------~i--------~vd~~~~-t~~~~iya~GD~~~----~--~~~ 343 (498)
+.||.|+|......-+ +...-..++..+ .. .|+..-. +-+|++|++|-... . ...
T Consensus 226 ~~~~~VV~ATG~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~ 304 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAF-CAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGP 304 (326)
T ss_dssp TTCCEEEECCCCC--CCSH-HHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCCBCCS
T ss_pred ccCCEEEECcCCCchHHHH-HHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcCCCCCCh
Confidence 9999999987655432 111000011111 11 1111112 26799999997762 2 222
Q ss_pred hHHH-HHHHHHHHHHHh
Q 042564 344 TPVA-LMEGTCFAKTVF 359 (498)
Q Consensus 344 ~~~A-~~~g~~aa~~i~ 359 (498)
+-.+ +.+|+.+|+.|+
T Consensus 305 ~fg~m~~sg~~~a~~~~ 321 (326)
T 2gjc_A 305 TFGAMALSGVHAAEQIL 321 (326)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHH
Confidence 2233 467888888775
No 314
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.53 E-value=4.6e-05 Score=74.34 Aligned_cols=47 Identities=17% Similarity=0.248 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcC
Q 042564 241 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 241 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
...+...+.+.+++.|++++. ++|.++...+ .+.+|.||+|+|....
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAG 187 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChH
Confidence 456778888889999999988 7887763221 2579999999997654
No 315
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.49 E-value=0.00095 Score=68.68 Aligned_cols=98 Identities=18% Similarity=0.134 Sum_probs=69.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC-------CC-------------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL-------PL------------------------------------- 237 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~-------~l------------------------------------- 237 (498)
-+|+|||+|+.|+.+|..+++.|.+|+++++.+. .+
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 112 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 112 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 4899999999999999999999999999997431 00
Q ss_pred -CCCCH------------HHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCe--EEEcCEEEEecCCCcCCCC
Q 042564 238 -RGFDD------------EMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGE--EIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 238 -~~~~~------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~--~i~~D~vi~a~G~~p~~~~ 302 (498)
..++. .+...+...++..+|+++.+. +..+ +.+.+.+...+|+ ++.+|.+|+|||.+|....
T Consensus 113 ~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~--d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~p~ 189 (519)
T 3qfa_A 113 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFI--GPHRIKATNNKGKEKIYSAERFLIATGERPRYLG 189 (519)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEE--ETTEEEEECTTCCCCEEEEEEEEECCCEEECCCC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe--eCCEEEEEcCCCCEEEEECCEEEEECCCCcCCCC
Confidence 01111 111122345667899998773 3333 4456677776665 7999999999999887654
No 316
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.49 E-value=0.00027 Score=71.74 Aligned_cols=98 Identities=15% Similarity=0.237 Sum_probs=68.1
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV 102 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~ 102 (498)
..+++|||||+.|+..|..+++.|.+|+++++ .+ .+ .|
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~------~~---~~---------l~------------------------ 207 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYR------GK---EI---------LS------------------------ 207 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECS------SS---SS---------ST------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEc------CC---cc---------cc------------------------
Confidence 35899999999999999999999999999993 11 10 00
Q ss_pred ccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeC--C-EEEEE-eCCCceEEEEcCeEEEcCCCCC
Q 042564 103 HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGP--N-EVEVT-QLDGTKLSYSAKHILIATGSRA 177 (498)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~--~-~~~v~-~~~g~~~~~~~d~liiAtG~~p 177 (498)
.++. .+...+.+.+++.|++++.++ +..+.. + .+.|. +.+|+ +.+|.||+|+|.+|
T Consensus 208 ----~~~~------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~---i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 208 ----RFDQ------------DMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE---IVADQVMLALGRMP 268 (463)
T ss_dssp ----TSCH------------HHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE---EEESEEEECSCEEE
T ss_pred ----ccCH------------HHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe---EEeCEEEEeeCccc
Confidence 0110 112233455677899999875 544432 2 35677 76662 89999999999888
Q ss_pred CCCC
Q 042564 178 QRAP 181 (498)
Q Consensus 178 ~~p~ 181 (498)
+...
T Consensus 269 ~~~~ 272 (463)
T 4dna_A 269 NTNG 272 (463)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 7653
No 317
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.46 E-value=0.00011 Score=79.54 Aligned_cols=34 Identities=32% Similarity=0.480 Sum_probs=31.5
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
...+||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~ 309 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEA 309 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEe
Confidence 3457999999999999999999999999999995
No 318
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.46 E-value=0.00069 Score=69.09 Aligned_cols=98 Identities=18% Similarity=0.228 Sum_probs=66.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH 103 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~~~ 103 (498)
.+++|||||+.|+..|..+++.|.+|+++++ ..+ +|
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~----------~~~---------l~------------------------- 223 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVR----------SIV---------LR------------------------- 223 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES----------SCS---------ST-------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeC----------CCC---------Cc-------------------------
Confidence 4799999999999999999999999999992 110 00
Q ss_pred cccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEe---CCEEEEEeCC---CceEEEEcCeEEEcCCCC
Q 042564 104 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVG---PNEVEVTQLD---GTKLSYSAKHILIATGSR 176 (498)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~---~~~~~v~~~~---g~~~~~~~d~liiAtG~~ 176 (498)
.++. .+...+.+.+++.||+++.++ +..+. .+.+.|...+ ++..++.+|.|++|+|.+
T Consensus 224 ---~~d~------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 224 ---GFDQ------------QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp ---TSCH------------HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred ---ccCH------------HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccc
Confidence 0110 112223455677899999886 44443 2334554433 334578999999999988
Q ss_pred CCCC
Q 042564 177 AQRA 180 (498)
Q Consensus 177 p~~p 180 (498)
|+..
T Consensus 289 p~~~ 292 (483)
T 3dgh_A 289 GLVD 292 (483)
T ss_dssp ECCG
T ss_pred cCcC
Confidence 8754
No 319
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.46 E-value=5.3e-05 Score=84.49 Aligned_cols=93 Identities=14% Similarity=0.232 Sum_probs=71.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCC-cEEEEeeCCCCC-------CC--CCHHHHHHHHHHHHhCCCEEEcCccEEEEEE
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGS-TVDLLFRKELPL-------RG--FDDEMRAVVARNLEGRGINLHPRTTIKELIK 270 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~-~V~lv~~~~~~l-------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~ 270 (498)
.++|+|||+|+.|+.+|..|++.|. +|+++++.+.+. +. ++.++.....+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4689999999999999999999998 799999976431 22 4566677777888999999999977631
Q ss_pred eCCeEEEEECCCeEEEcCEEEEecCC-CcCC
Q 042564 271 SEEGVKVITDHGEEIVADVVLFATGR-APNT 300 (498)
Q Consensus 271 ~~~~~~v~~~~g~~i~~D~vi~a~G~-~p~~ 300 (498)
+ .+++.+++.+.+|.||+|||. .|..
T Consensus 264 --~--~v~~~~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 --N--EITLNTLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp --T--SBCHHHHHHTTCCEEEECCCCCEECC
T ss_pred --c--eEEhhhcCccCCCEEEEecCCCCCCC
Confidence 1 133344445779999999998 4764
No 320
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.45 E-value=2.3e-05 Score=79.32 Aligned_cols=88 Identities=18% Similarity=0.162 Sum_probs=67.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHH-C------CCcEEEEeeCCCCC--------CC--CCHHHHHHHHHHHHhCCCEEEcCc
Q 042564 201 PKRAVVLGGGYIAVEFASIWRG-M------GSTVDLLFRKELPL--------RG--FDDEMRAVVARNLEGRGINLHPRT 263 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~-~------g~~V~lv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~ 263 (498)
+++|+|||+|+.|+.+|..|.+ . +.+|+++++.+.+. +. ...++...+.+.+++.|++++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999999 7 89999999986543 21 233566777788888899999885
Q ss_pred cEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCC
Q 042564 264 TIKELIKSEEGVKVITDHGEEIVADVVLFATGRA 297 (498)
Q Consensus 264 ~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 297 (498)
.+ +. .|.++++ .+.+|.||+|||..
T Consensus 83 ~v------~~--~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV------GE--HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB------TT--TBCHHHH-HHHSSEEEECCCCC
T ss_pred EE------CC--EEEECCC-eEeCCEEEEeeCCC
Confidence 53 11 1334444 47899999999997
No 321
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.44 E-value=0.00042 Score=71.93 Aligned_cols=95 Identities=15% Similarity=0.263 Sum_probs=71.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCC-------------------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR------------------------------------------- 238 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~------------------------------------------- 238 (498)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 3799999999999999999999999999997653210
Q ss_pred -C--------------------------CC-HHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECC---C--eEE
Q 042564 239 -G--------------------------FD-DEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDH---G--EEI 285 (498)
Q Consensus 239 -~--------------------------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~---g--~~i 285 (498)
. ++ ..+.+.+.+.+++. ++++++|+++..+++++.+++.+ | +++
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i 183 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAV 183 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEE
Confidence 0 00 12444555555554 88999999998887777777654 6 479
Q ss_pred EcCEEEEecCCCcC
Q 042564 286 VADVVLFATGRAPN 299 (498)
Q Consensus 286 ~~D~vi~a~G~~p~ 299 (498)
.+|.||.|.|..+.
T Consensus 184 ~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 184 HARYLVACDGASSP 197 (549)
T ss_dssp EEEEEEECCCTTCH
T ss_pred EeCEEEECCCCCcH
Confidence 99999999997653
No 322
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.44 E-value=7.4e-05 Score=79.31 Aligned_cols=32 Identities=34% Similarity=0.501 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHHHHHHHHh-----CCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSAN-----FGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~-----~g~~V~lvek 54 (498)
++||+||||||+|+++|+.|++ .|.+|+|||+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~ 44 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDK 44 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeC
Confidence 4899999999999999999999 9999999995
No 323
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.41 E-value=0.00017 Score=76.86 Aligned_cols=87 Identities=24% Similarity=0.282 Sum_probs=66.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC---------CCCC--CHHHHHHHHHHHHhCCCEEEcCccEEEEE
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP---------LRGF--DDEMRAVVARNLEGRGINLHPRTTIKELI 269 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~---------l~~~--~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~ 269 (498)
.++|+|||+|+.|+.+|..+++.|.+|+++++.+.+ ++.. ..++...+.+.+++.||++++++.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 368999999999999999999999999999987653 1211 123445566777888999999876532
Q ss_pred EeCCeEEEEECCCeEE-EcCEEEEecCCCcCCCC
Q 042564 270 KSEEGVKVITDHGEEI-VADVVLFATGRAPNTKR 302 (498)
Q Consensus 270 ~~~~~~~v~~~~g~~i-~~D~vi~a~G~~p~~~~ 302 (498)
..+ .+|.+|+|||.+|....
T Consensus 451 -------------~~~~~~d~lviAtG~~p~~~~ 471 (671)
T 1ps9_A 451 -------------DQLQAFDETILASGIVPRTPP 471 (671)
T ss_dssp -------------SSSCCSSEEEECCCEEECCCC
T ss_pred -------------HHhhcCCEEEEccCCCcCCCC
Confidence 113 79999999999887654
No 324
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.40 E-value=0.00078 Score=70.68 Aligned_cols=30 Identities=30% Similarity=0.363 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+++|||||+.|+-+|..|++.|.+|++++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~ 316 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMV 316 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEE
Confidence 479999999999999999999999999999
No 325
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.38 E-value=0.0004 Score=76.86 Aligned_cols=101 Identities=19% Similarity=0.105 Sum_probs=71.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC----C---C-C----CHHHHHHHHHHHHhC-CCEEEcCccEEEE
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL----R---G-F----DDEMRAVVARNLEGR-GINLHPRTTIKEL 268 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l----~---~-~----~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i 268 (498)
.+|+|||+|+.|+.+|..+.+.|.+|+++++.+.+- . . + ..++...+.+.+.+. +++++.++.|..+
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i 208 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGS 208 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEee
Confidence 579999999999999999999999999999876431 0 0 1 234445555666664 9999999999887
Q ss_pred EEeCCeEEEE---------E------CCCeEEEcCEEEEecCCCcCCCC
Q 042564 269 IKSEEGVKVI---------T------DHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 269 ~~~~~~~~v~---------~------~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
...+....+. . .++..+.+|.+|+|||..|....
T Consensus 209 ~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ 257 (965)
T 2gag_A 209 YDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIV 257 (965)
T ss_dssp ETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCC
T ss_pred ecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCC
Confidence 5332111111 1 11236899999999999876543
No 326
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.35 E-value=0.00011 Score=75.85 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHHh-CCCcEEEEccC
Q 042564 23 DFDLFVIGAGSGGVRAARFSAN-FGAKVGICELP 55 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lvek~ 55 (498)
+||+||||||+||+.+|.+|++ .+.+|+|+|+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG 50 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAG 50 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 6999999999999999999998 78999999954
No 327
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.35 E-value=0.001 Score=70.26 Aligned_cols=97 Identities=15% Similarity=0.211 Sum_probs=74.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHH-CCCcEEEEeeCCCCCC------------------------------------------
Q 042564 202 KRAVVLGGGYIAVEFASIWRG-MGSTVDLLFRKELPLR------------------------------------------ 238 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~-~g~~V~lv~~~~~~l~------------------------------------------ 238 (498)
-+|+|||+|+.|+-+|..|++ .|.+|+++++.+.+..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 379999999999999999999 8999999997643200
Q ss_pred ----------------C--------CC-HHHHHHHHHHHHhCCC--EEEcCccEEEEEEeCC----eEEEEEC------C
Q 042564 239 ----------------G--------FD-DEMRAVVARNLEGRGI--NLHPRTTIKELIKSEE----GVKVITD------H 281 (498)
Q Consensus 239 ----------------~--------~~-~~~~~~l~~~l~~~Gv--~i~~~~~v~~i~~~~~----~~~v~~~------~ 281 (498)
. .+ ..+.+.+.+.+++.|+ +++++++|+++..+++ .+.+++. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 01 2455667778888877 9999999999987653 4666654 4
Q ss_pred C--eEEEcCEEEEecCCCc
Q 042564 282 G--EEIVADVVLFATGRAP 298 (498)
Q Consensus 282 g--~~i~~D~vi~a~G~~p 298 (498)
| +++.+|.||.|.|.++
T Consensus 193 G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TCEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCcch
Confidence 5 4789999999999654
No 328
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.35 E-value=0.001 Score=67.62 Aligned_cols=97 Identities=19% Similarity=0.254 Sum_probs=70.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC-------------CCC------------------------------
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP-------------LRG------------------------------ 239 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~-------------l~~------------------------------ 239 (498)
.|+|||+|..|+-.|..+++.|.+|+++++...- +..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 4899999999999999999999999999986100 000
Q ss_pred --------------C----------------------CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeE-EEEEC-C
Q 042564 240 --------------F----------------------DDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGV-KVITD-H 281 (498)
Q Consensus 240 --------------~----------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~v~~~-~ 281 (498)
+ ...+.+.+.+.+++.|++++.++.+ ++..+++.+ .+... +
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~ 159 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKR 159 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeC
Confidence 0 0134455666667789999999999 997766653 34432 2
Q ss_pred CeEEEcCEEEEecCCCcCC
Q 042564 282 GEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 282 g~~i~~D~vi~a~G~~p~~ 300 (498)
+..+.+|.||+|+|..+..
T Consensus 160 ~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 160 GLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp EEECCCSEEEECCCCCGGG
T ss_pred CCeEEeeeEEECCCCCccc
Confidence 3357799999999987754
No 329
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.35 E-value=0.0013 Score=67.63 Aligned_cols=56 Identities=18% Similarity=0.274 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhCCCEEEcCccEEEEEEe-CCe-EEEEEC-CCe--EEEcC-EEEEecCCCc
Q 042564 243 EMRAVVARNLEGRGINLHPRTTIKELIKS-EEG-VKVITD-HGE--EIVAD-VVLFATGRAP 298 (498)
Q Consensus 243 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~-~~v~~~-~g~--~i~~D-~vi~a~G~~p 298 (498)
.+.+.+.+.+++.|+++++++.|+++..+ ++. ..|... +++ ++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 45556667777889999999999999887 333 334433 343 58896 9999999765
No 330
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.33 E-value=0.00098 Score=71.13 Aligned_cols=99 Identities=17% Similarity=0.088 Sum_probs=69.2
Q ss_pred ccEEEEC--CChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccccCchhhHHHHHHhHhhHHHhhhhcCCcc
Q 042564 24 FDLFVIG--AGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE 101 (498)
Q Consensus 24 ~dvvIIG--gG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~~g~~p~~~l~~~~~~~~~~~~~~~~g~~ 101 (498)
.+|+||| +|..|+.+|..|++.|.+|+++++ .+ .+....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~------~~---~l~~~~------------------------------ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTP------GA---QVSSWT------------------------------ 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEES------SS---STTGGG------------------------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEec------cc---cccccc------------------------------
Confidence 4699999 999999999999999999999993 11 100000
Q ss_pred cccccccCHHHHHHHHHHHHHHHhHHHHHHHHhCCcEEEEeE-EEEEeCCEEEEEeC-CCceEEEEcCeEEEcCCCCCCC
Q 042564 102 VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGE-GKIVGPNEVEVTQL-DGTKLSYSAKHILIATGSRAQR 179 (498)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~-~~~i~~~~~~v~~~-~g~~~~~~~d~liiAtG~~p~~ 179 (498)
... .....+...+++.||+++.++ +..++.+...+... +++..++.+|.||+|+|.+|..
T Consensus 565 ---~~~---------------~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 565 ---NNT---------------FEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp ---GGG---------------TCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECC
T ss_pred ---ccc---------------hhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCCh
Confidence 000 001223345667899999986 66788877776642 3345589999999999988764
No 331
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.31 E-value=0.0016 Score=66.89 Aligned_cols=53 Identities=21% Similarity=0.209 Sum_probs=42.9
Q ss_pred HHHHHHHhCCCEEEcCccEEEEEEeCCe--EEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 247 VVARNLEGRGINLHPRTTIKELIKSEEG--VKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 247 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
.+.+.+++.|++++.+ +|+++..++++ ..|.+.+|+++.+|.||.|+|.....
T Consensus 178 ~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 178 YLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 3455566679999999 99999875554 67888888889999999999997655
No 332
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.28 E-value=0.00026 Score=73.84 Aligned_cols=58 Identities=16% Similarity=0.198 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCCEEEcCccEEEEEEeC--Ce-EEEEECCCeEEEcCEEEEecCCCcC
Q 042564 242 DEMRAVVARNLEGRGINLHPRTTIKELIKSE--EG-VKVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 242 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~-~~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
..+.+.+.+.++..|.++++++.|.+|..++ +. ..|...+|+++.||.||......|.
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 5688899999999999999999999998776 44 4455678999999999997776654
No 333
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.28 E-value=0.00019 Score=74.54 Aligned_cols=33 Identities=36% Similarity=0.546 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.+||+||||||++|+.+|.+|++.|.+|+|+|+
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~ 38 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLER 38 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 469999999999999999999999999999995
No 334
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.26 E-value=0.00012 Score=75.77 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.6
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
..+||+||||||+||+.+|.+|++ |.+|+|+|+
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEa 56 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLER 56 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECS
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEec
Confidence 346999999999999999999999 999999993
No 335
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.20 E-value=0.00023 Score=74.00 Aligned_cols=33 Identities=30% Similarity=0.384 Sum_probs=30.6
Q ss_pred CCccEEEECCChhHHHHHHHHHhCC-CcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFG-AKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g-~~V~lvek 54 (498)
.+||+||||||.||+.+|.+|++.+ .+|+|||+
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEa 38 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEA 38 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEec
Confidence 4699999999999999999999977 79999994
No 336
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.14 E-value=0.0036 Score=64.50 Aligned_cols=53 Identities=19% Similarity=0.325 Sum_probs=41.5
Q ss_pred HHHHHHHh-CCCEEEcCccEEEEEEeCCe--EEEEECCCeEEEcCEEEEecCCCcCC
Q 042564 247 VVARNLEG-RGINLHPRTTIKELIKSEEG--VKVITDHGEEIVADVVLFATGRAPNT 300 (498)
Q Consensus 247 ~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~D~vi~a~G~~p~~ 300 (498)
.+.+.+++ .|++++.+ .|+++..++++ +.|.+.+|+++.+|.||.|+|..+..
T Consensus 180 ~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 180 LLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 34455566 79999999 69999876544 46777887789999999999998765
No 337
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.07 E-value=0.00028 Score=69.65 Aligned_cols=86 Identities=16% Similarity=0.195 Sum_probs=67.9
Q ss_pred eEEEEcCCHHHHHHHHHHHHC--CCcEEEEeeCCCCC-----------------------CC------------------
Q 042564 203 RAVVLGGGYIAVEFASIWRGM--GSTVDLLFRKELPL-----------------------RG------------------ 239 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~--g~~V~lv~~~~~~l-----------------------~~------------------ 239 (498)
+|+|||+|+.|+.+|..|++. |.+|+++++.+.+- ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 699999999999999999998 99999999875430 00
Q ss_pred --------------CCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEECCCeEEEcCEEEEecCCCcC
Q 042564 240 --------------FDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 240 --------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 299 (498)
...++.+.+.+.+++.|++++++++|+++... +++.+|.||.|.|..+.
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch
Confidence 01356677788888889999999998877421 12579999999998776
No 338
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.03 E-value=0.00039 Score=72.24 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=31.5
Q ss_pred CCccEEEECCChhHHHHHHHHHh-CCCcEEEEccCC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSAN-FGAKVGICELPF 56 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lvek~~ 56 (498)
..||+||||||.||+.+|.+|++ .+.+|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46999999999999999999997 689999999543
No 339
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.99 E-value=0.0038 Score=65.32 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=69.7
Q ss_pred eEEEEcCCHHHHHHHHHHHHCC--CcEEEEeeCCCC--------------CCC------------------CC-------
Q 042564 203 RAVVLGGGYIAVEFASIWRGMG--STVDLLFRKELP--------------LRG------------------FD------- 241 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g--~~V~lv~~~~~~--------------l~~------------------~~------- 241 (498)
.|+|||+|..|+-+|..+++.| .+|.++++.+.. +.. .+
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~~ 86 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYF 86 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 6999999999999999999999 999999986321 000 00
Q ss_pred -----------------------------------------------HHHHHHHHHHHHhCC-CEEEcCccEEEEEEeCC
Q 042564 242 -----------------------------------------------DEMRAVVARNLEGRG-INLHPRTTIKELIKSEE 273 (498)
Q Consensus 242 -----------------------------------------------~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~~~~ 273 (498)
..+...+.+.+.+.| |+++.++.+.++..+++
T Consensus 87 ~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g 166 (602)
T 1kf6_A 87 VHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDG 166 (602)
T ss_dssp HHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCC
Confidence 133444555666678 99999999999987766
Q ss_pred eE-EE--E-ECCCe--EEEcCEEEEecCC
Q 042564 274 GV-KV--I-TDHGE--EIVADVVLFATGR 296 (498)
Q Consensus 274 ~~-~v--~-~~~g~--~i~~D~vi~a~G~ 296 (498)
.+ .+ . +.+|+ .+.++.||+|+|.
T Consensus 167 ~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 167 HVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp EEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred EEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 42 23 2 25776 6899999999995
No 340
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.98 E-value=0.00059 Score=70.02 Aligned_cols=35 Identities=31% Similarity=0.329 Sum_probs=32.3
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccC
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELP 55 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~ 55 (498)
..+||++|||+|++|+.+|.+|++.|.+|+|+|+.
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 43 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMG 43 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC
Confidence 45699999999999999999999999999999953
No 341
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.96 E-value=0.0027 Score=68.12 Aligned_cols=31 Identities=16% Similarity=0.043 Sum_probs=29.1
Q ss_pred CccEEEEC--CChhHHHHHHHHHhCCCcEEEEc
Q 042564 23 DFDLFVIG--AGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIG--gG~aGl~aA~~l~~~g~~V~lve 53 (498)
..+|+||| ||..|+-+|..|++.|.+|++++
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~ 560 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVS 560 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEe
Confidence 35899999 99999999999999999999999
No 342
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.90 E-value=0.00044 Score=71.65 Aligned_cols=34 Identities=32% Similarity=0.379 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHh-CCCcEEEEccCC
Q 042564 23 DFDLFVIGAGSGGVRAARFSAN-FGAKVGICELPF 56 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lvek~~ 56 (498)
.||+||||||.||+.+|.+|++ .+.+|+|+|+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 5999999999999999999999 899999999543
No 343
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.88 E-value=0.004 Score=62.84 Aligned_cols=35 Identities=20% Similarity=0.182 Sum_probs=31.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCC------CcEEEEeeCCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMG------STVDLLFRKELP 236 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g------~~V~lv~~~~~~ 236 (498)
++|+|||+|.+|+-+|..|.+.| .+|+++++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 58999999999999999999999 899999987643
No 344
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.87 E-value=0.00047 Score=72.84 Aligned_cols=32 Identities=25% Similarity=0.510 Sum_probs=29.9
Q ss_pred CccEEEECCChhHHHHHHHHHhCC--------CcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFG--------AKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g--------~~V~lvek 54 (498)
.++|+|||||++|++||+.|++.| .+|+|+|+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~ 95 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEA 95 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEec
Confidence 478999999999999999999988 99999995
No 345
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.79 E-value=0.00078 Score=69.07 Aligned_cols=34 Identities=24% Similarity=0.193 Sum_probs=31.6
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEccC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICELP 55 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~ 55 (498)
.+||++|||+|++|+.+|.+|++.|.+|+|+|+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 37 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMG 37 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3589999999999999999999999999999953
No 346
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.76 E-value=0.013 Score=60.85 Aligned_cols=51 Identities=20% Similarity=0.205 Sum_probs=37.9
Q ss_pred HHHHHHhCCCEEEcCccEEEEEEeCCe-EEEEEC---CCe--EEEcCEEEEecCCCc
Q 042564 248 VARNLEGRGINLHPRTTIKELIKSEEG-VKVITD---HGE--EIVADVVLFATGRAP 298 (498)
Q Consensus 248 l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~---~g~--~i~~D~vi~a~G~~p 298 (498)
+.+.+++.|++++.+++|+++..+++. ..|.+. +|+ ++.+|.||+|+|...
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 344556789999999999999887765 335442 333 699999999999653
No 347
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.70 E-value=0.0093 Score=63.17 Aligned_cols=32 Identities=13% Similarity=0.245 Sum_probs=29.9
Q ss_pred eEEEEcCCHHHHHHHHHHHH-----CCCcEEEEeeCC
Q 042564 203 RAVVLGGGYIAVEFASIWRG-----MGSTVDLLFRKE 234 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~-----~g~~V~lv~~~~ 234 (498)
+|+|||+|+.|+-+|..|++ .|.+|+++++.+
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 69999999999999999999 999999999764
No 348
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.68 E-value=0.0018 Score=67.62 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=32.1
Q ss_pred CCccEEEECCChhHHHHHHHHHh-CCCcEEEEccCC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSAN-FGAKVGICELPF 56 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lvek~~ 56 (498)
.+||+||||+|++|+.+|.+|++ .|.+|+|+|+..
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46999999999999999999999 899999999643
No 349
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.63 E-value=0.019 Score=59.78 Aligned_cols=32 Identities=31% Similarity=0.273 Sum_probs=29.2
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
.|+|||+|..|+-.|..+++.|.+|.++++.+
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 69999999999999999999999999998764
No 350
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.62 E-value=0.0014 Score=67.80 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHHhC-CCcEEEEccC
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANF-GAKVGICELP 55 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lvek~ 55 (498)
..||++|||+|++|+.+|.+|++. |.+|+|+|+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g 46 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAG 46 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 469999999999999999999996 8999999953
No 351
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.39 E-value=0.033 Score=58.23 Aligned_cols=50 Identities=16% Similarity=0.089 Sum_probs=36.1
Q ss_pred HHHHHhCCCEEEcCccEEEEEEeCCe-EEEEE---CCCe--EEEcCEEEEecCCCc
Q 042564 249 ARNLEGRGINLHPRTTIKELIKSEEG-VKVIT---DHGE--EIVADVVLFATGRAP 298 (498)
Q Consensus 249 ~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~---~~g~--~i~~D~vi~a~G~~p 298 (498)
.+.+.+.||+++.++.+.++..+++. ..+.. .+|+ .+.++.||+|+|-..
T Consensus 162 ~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 162 YGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 33445568999999999999876554 23333 4665 688999999999654
No 352
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.37 E-value=0.0085 Score=61.82 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=29.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
-.|+|||+|..|+-+|..+++ |.+|.++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 379999999999999999999 999999998763
No 353
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.18 E-value=0.027 Score=57.40 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=69.3
Q ss_pred eEEEEcCCHHHHHHHHHHHHCC--------------CcEEEEeeCCCC-------CCC--------------------C-
Q 042564 203 RAVVLGGGYIAVEFASIWRGMG--------------STVDLLFRKELP-------LRG--------------------F- 240 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g--------------~~V~lv~~~~~~-------l~~--------------------~- 240 (498)
.|+|||+|+.|+-+|..|.+.+ ....++++.+.+ ++. +
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 6999999999999999887642 245566665421 110 0
Q ss_pred -----------------------CHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCC--------eEEEEECCC-----eE
Q 042564 241 -----------------------DDEMRAVVARNLEGRGINLHPRTTIKELIKSEE--------GVKVITDHG-----EE 284 (498)
Q Consensus 241 -----------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--------~~~v~~~~g-----~~ 284 (498)
-.++.+.++...++.+..++++++|+++...+. ...|++.++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 124555566666666777999999999976442 256666433 36
Q ss_pred EEcCEEEEecCCCcCCCC
Q 042564 285 IVADVVLFATGRAPNTKR 302 (498)
Q Consensus 285 i~~D~vi~a~G~~p~~~~ 302 (498)
+.++.||+|+|..|....
T Consensus 201 ~~ar~vVlatG~~P~iP~ 218 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMPS 218 (501)
T ss_dssp EEEEEEEECCCCEECCCT
T ss_pred EEeCEEEECcCCCCCCCC
Confidence 889999999999888764
No 354
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.05 E-value=0.039 Score=58.18 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=36.0
Q ss_pred HHHHHhCCCEEEcCccEEEEEEeCCe-EEEEE---CCCe--EEEcCEEEEecCCCc
Q 042564 249 ARNLEGRGINLHPRTTIKELIKSEEG-VKVIT---DHGE--EIVADVVLFATGRAP 298 (498)
Q Consensus 249 ~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~---~~g~--~i~~D~vi~a~G~~p 298 (498)
.+.+.+.||+++.++.|.++..+++. ..+.. .+|+ .+.++.||+|+|-..
T Consensus 165 ~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 165 ANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 34445568999999999999876554 23332 4665 488999999999644
No 355
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=95.92 E-value=0.016 Score=60.74 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=30.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
..|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 47 ~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~ 79 (623)
T 3pl8_A 47 YDVVIVGSGPIGCTYARELVGAGYKVAMFDIGE 79 (623)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCcEEEEeccC
Confidence 379999999999999999999999999998765
No 356
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.90 E-value=0.0073 Score=55.54 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=31.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
.|+|||+|+.|+.+|..|++.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999987654
No 357
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.33 E-value=0.086 Score=55.52 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=29.6
Q ss_pred CeEEEEcCCHHHHHHHHHHH---H-CCCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWR---G-MGSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~---~-~g~~V~lv~~~~ 234 (498)
-.|+|||+|..|+-.|..++ + .|.+|.++++.+
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 37999999999999999999 5 799999998865
No 358
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.05 E-value=0.098 Score=49.97 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=27.7
Q ss_pred ccEEEECCChhHHH-HHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVR-AARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~-aA~~l~~~g~~V~lve 53 (498)
.++.|||.|.+|++ +|..|.+.|++|++.|
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEc
Confidence 47999999999996 7888899999999999
No 359
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.96 E-value=0.028 Score=47.30 Aligned_cols=32 Identities=19% Similarity=0.291 Sum_probs=29.6
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
..+++|||+|.-|...|..|.+.|.+|+++|+
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 35799999999999999999999999999993
No 360
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.82 E-value=0.019 Score=58.51 Aligned_cols=35 Identities=29% Similarity=0.451 Sum_probs=30.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
|+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 68999999999999999999999999999998764
No 361
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.69 E-value=0.041 Score=45.38 Aligned_cols=31 Identities=13% Similarity=0.040 Sum_probs=29.3
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
+-+++|||.|.-|...|..|.+.|++|+++|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid 37 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIE 37 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 3479999999999999999999999999999
No 362
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.55 E-value=0.065 Score=54.41 Aligned_cols=41 Identities=32% Similarity=0.408 Sum_probs=36.4
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
.+||+|||||++|++||..|++.|++|+|+|+ ...+||.|.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~---------~~~~GGr~~ 79 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEA---------RDRIGGRSW 79 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECS---------SSBSBTTCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeC---------CCCCCCcce
Confidence 38999999999999999999999999999995 556777763
No 363
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=94.42 E-value=0.077 Score=55.90 Aligned_cols=33 Identities=15% Similarity=0.066 Sum_probs=29.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC------CCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM------GSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~------g~~V~lv~~~~ 234 (498)
-.|+|||+|..|+-.|..+++. |.+|.++++..
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 3799999999999999999987 99999998753
No 364
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.41 E-value=0.055 Score=51.73 Aligned_cols=78 Identities=22% Similarity=0.188 Sum_probs=57.3
Q ss_pred CCeEEEEcCCHHHHH-HHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEE
Q 042564 201 PKRAVVLGGGYIAVE-FASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT 279 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e-~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~ 279 (498)
.+++.|||.|-+|+. +|..|.++|.+|++.+..+. ++ ..+.|++.|++++.+.....+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~-----~~-----~~~~L~~~gi~v~~g~~~~~l----------- 62 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY-----PP-----MSTQLEALGIDVYEGFDAAQL----------- 62 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC-----TT-----HHHHHHHTTCEEEESCCGGGG-----------
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC-----cH-----HHHHHHhCCCEEECCCCHHHc-----------
Confidence 578999999999997 89999999999999988653 11 234567789998765322111
Q ss_pred CCCeEEEcCEEEEecCCCcCCCC
Q 042564 280 DHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 280 ~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
.. ..+|.||.+.|..|..+.
T Consensus 63 ~~---~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 63 DE---FKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp GS---CCCSEEEECTTCCTTCHH
T ss_pred CC---CCCCEEEECCCcCCCCHH
Confidence 00 147999999999887654
No 365
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.32 E-value=0.041 Score=53.70 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=31.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 5999999999999999999999999999997654
No 366
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.01 E-value=0.098 Score=52.60 Aligned_cols=50 Identities=14% Similarity=0.217 Sum_probs=40.3
Q ss_pred CccccCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCccccccc
Q 042564 15 NQEEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCVI 73 (498)
Q Consensus 15 ~~~~~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~~ 73 (498)
+....|+..|||+|||+|++|+++|..|++.|++|+++|+ ...+||.|..
T Consensus 12 ~~~~~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~---------~~~~Gg~~~s 61 (475)
T 3p1w_A 12 ENLYFQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDR---------NPYYGGETAS 61 (475)
T ss_dssp -----CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCGGGCE
T ss_pred cccccccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEec---------cCCCCCCccc
Confidence 3445677789999999999999999999999999999995 5568888754
No 367
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.91 E-value=0.1 Score=46.70 Aligned_cols=75 Identities=13% Similarity=0.183 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEE
Q 042564 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT 279 (498)
Q Consensus 200 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~ 279 (498)
..++|+|||+|.+|..-+..|.+.|.+|+++.+. ..+++ .+..++.+++++...-
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~------~~~~l----~~l~~~~~i~~i~~~~--------------- 84 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT------VSAEI----NEWEAKGQLRVKRKKV--------------- 84 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS------CCHHH----HHHHHTTSCEEECSCC---------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC------CCHHH----HHHHHcCCcEEEECCC---------------
Confidence 3589999999999999999999999999999753 34443 3333444566553311
Q ss_pred CCCeEEEcCEEEEecCCCcC
Q 042564 280 DHGEEIVADVVLFATGRAPN 299 (498)
Q Consensus 280 ~~g~~i~~D~vi~a~G~~p~ 299 (498)
..+..-.+|+||.|||....
T Consensus 85 ~~~dL~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 85 GEEDLLNVFFIVVATNDQAV 104 (223)
T ss_dssp CGGGSSSCSEEEECCCCTHH
T ss_pred CHhHhCCCCEEEECCCCHHH
Confidence 11111248999999987543
No 368
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.88 E-value=0.061 Score=44.20 Aligned_cols=30 Identities=30% Similarity=0.441 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+++|+|+|.-|...|..|.+.|++|+++|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 479999999999999999999999999999
No 369
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.74 E-value=0.073 Score=44.50 Aligned_cols=30 Identities=13% Similarity=0.079 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+++|+|+|..|...|..|.+.|.+|+++|
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid 33 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVIS 33 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 579999999999999999999999999999
No 370
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.68 E-value=0.062 Score=43.85 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=28.5
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+++|||+|..|...|..|.+.|.+|+++|
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d 34 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLID 34 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 369999999999999999999999999999
No 371
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.60 E-value=0.093 Score=43.98 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 200 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
..++++|+|+|.+|..++..|.+.|.+|+++.+.+
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45799999999999999999999999999998864
No 372
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.45 E-value=0.073 Score=41.89 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=28.5
Q ss_pred ccEEEECCChhHHHHHHHHHhCC-CcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFG-AKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g-~~V~lve 53 (498)
..++|+|+|..|...+..|.+.| .+|++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~ 36 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVAD 36 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 57999999999999999999999 8999999
No 373
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.43 E-value=0.048 Score=54.79 Aligned_cols=80 Identities=20% Similarity=0.129 Sum_probs=58.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEEC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITD 280 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~ 280 (498)
.++|.|+|.|.+|+-+|..|.+.|.+|++.+..+.. .++ ..+.|++.|++++.+.....+ +
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~---~~~-----~~~~L~~~gi~~~~g~~~~~~----------~- 69 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFD---ENP-----TAQSLLEEGIKVVCGSHPLEL----------L- 69 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGG---GCH-----HHHHHHHTTCEEEESCCCGGG----------G-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCccc---CCh-----HHHHHHhCCCEEEECCChHHh----------h-
Confidence 589999999999999999999999999999876421 112 234677789998876432110 0
Q ss_pred CCeEEEcCEEEEecCCCcCCCC
Q 042564 281 HGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 281 ~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
++ .+|.||+++|..|+.+.
T Consensus 70 ~~---~~d~vv~spgi~~~~p~ 88 (451)
T 3lk7_A 70 DE---DFCYMIKNPGIPYNNPM 88 (451)
T ss_dssp GS---CEEEEEECTTSCTTSHH
T ss_pred cC---CCCEEEECCcCCCCChh
Confidence 00 16899999999877654
No 374
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=93.35 E-value=0.097 Score=52.21 Aligned_cols=44 Identities=20% Similarity=0.211 Sum_probs=38.5
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccc
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
|+.++||+|||||++|+++|..|++.|++|+|+|+ ...+||.|.
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~---------~~~~gg~~~ 46 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDR---------NPYYGGESS 46 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCTTSC
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEec---------CCCcccccc
Confidence 45578999999999999999999999999999995 456777764
No 375
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.28 E-value=0.069 Score=53.24 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 200 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34689999999999999999999999999999875
No 376
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.17 E-value=0.086 Score=52.23 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=31.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
++|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 36999999999999999999999999999997653
No 377
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=93.14 E-value=0.093 Score=51.72 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=32.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
+-+|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 358999999999999999999999999999998754
No 378
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.04 E-value=0.06 Score=53.30 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=31.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999975
No 379
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.96 E-value=0.077 Score=53.92 Aligned_cols=38 Identities=32% Similarity=0.472 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCC
Q 042564 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPL 237 (498)
Q Consensus 200 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l 237 (498)
.+++|+|||+|.+|+.+|..|.+.|.+|+++++.+++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 35799999999999999999999999999999887643
No 380
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.76 E-value=0.11 Score=50.09 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=31.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
.+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 379999999999999999999999999999975
No 381
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.74 E-value=0.1 Score=51.58 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=31.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 6999999999999999999999999999997653
No 382
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=92.71 E-value=0.1 Score=54.17 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=32.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 36899999999999999999999999999998753
No 383
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=92.65 E-value=0.12 Score=50.73 Aligned_cols=33 Identities=30% Similarity=0.350 Sum_probs=31.1
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 799999999999999999999999999998764
No 384
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=92.51 E-value=0.12 Score=51.31 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=31.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
..+|+|||+|+.|+.+|..+++.|.+|+++++.+.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 35899999999999999999999999999998775
No 385
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=92.50 E-value=0.11 Score=50.42 Aligned_cols=33 Identities=27% Similarity=0.312 Sum_probs=31.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
.+|+|||+|..|+-+|..|++.|.+|+++++..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 489999999999999999999999999999875
No 386
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.48 E-value=0.12 Score=51.33 Aligned_cols=33 Identities=33% Similarity=0.420 Sum_probs=30.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
+|+|||+|..|+-.|..|++.|.+|+++++.++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~ 35 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGER 35 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 699999999999999999999999999998654
No 387
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.47 E-value=0.1 Score=53.01 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=30.8
Q ss_pred eEEEEcCCHHHHHHHHHHHH-CCCcEEEEeeCCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRG-MGSTVDLLFRKELP 236 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~-~g~~V~lv~~~~~~ 236 (498)
.|+|||+|.+|+-+|..|++ .|.+|+++++.+++
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 79999999999999999987 59999999988754
No 388
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=92.34 E-value=0.13 Score=50.18 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=31.6
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
+|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 6999999999999999999999999999998743
No 389
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.29 E-value=0.098 Score=50.70 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=30.9
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
+|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 699999999999999999999999999998754
No 390
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.24 E-value=0.13 Score=50.11 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=30.9
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 799999999999999999999999999998753
No 391
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.08 E-value=0.14 Score=44.09 Aligned_cols=31 Identities=19% Similarity=0.095 Sum_probs=29.0
Q ss_pred CccEEEECCChhHHHHHHHHHhC-CCcEEEEc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANF-GAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lve 53 (498)
..+++|||+|..|...|..|.+. |.+|+++|
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid 70 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIE 70 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEE
Confidence 34799999999999999999998 99999999
No 392
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.08 E-value=0.15 Score=49.30 Aligned_cols=33 Identities=42% Similarity=0.531 Sum_probs=30.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
.+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 489999999999999999999999999999753
No 393
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.06 E-value=0.15 Score=50.44 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=32.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCC-CcEEEEeeCCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMG-STVDLLFRKELP 236 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g-~~V~lv~~~~~~ 236 (498)
..+|+|||+|..|+-+|..|++.| .+|+++++.+++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 468999999999999999999999 899999987754
No 394
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.06 E-value=0.16 Score=49.47 Aligned_cols=35 Identities=23% Similarity=0.425 Sum_probs=32.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC-CC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK-EL 235 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~-~~ 235 (498)
+.+|+|||+|..|+-+|..|.+.|.+|+++++. ++
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 568999999999999999999999999999987 43
No 395
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.04 E-value=0.14 Score=45.76 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=29.5
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
...|+|||||..|...|..|.+.|.+|+|++
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVva 61 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVA 61 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence 4689999999999999999999999999999
No 396
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.99 E-value=0.13 Score=41.94 Aligned_cols=30 Identities=23% Similarity=0.217 Sum_probs=28.5
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+++|+|+|..|...|..|.+.|.+|+++|
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d 36 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVD 36 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 369999999999999999999999999999
No 397
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=91.92 E-value=0.16 Score=49.37 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
++|+|||+|..|++.|..+++.|.+|.++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999999765
No 398
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.90 E-value=0.14 Score=49.83 Aligned_cols=33 Identities=27% Similarity=0.446 Sum_probs=30.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
.+|+|||+|.+|+.+|..|++.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999874
No 399
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.77 E-value=0.3 Score=48.93 Aligned_cols=47 Identities=23% Similarity=0.302 Sum_probs=40.0
Q ss_pred cccCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccc
Q 042564 17 EEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 17 ~~~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
|+.|+.++||||||||++|++||..|++.|++|+|+|+ ...+||.|.
T Consensus 5 ~~~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~---------~~~~GG~~~ 51 (453)
T 2bcg_G 5 QETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDK---------QDHYGGEAA 51 (453)
T ss_dssp --CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCGGGC
T ss_pred hhhccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeC---------CCCCCcccc
Confidence 44566679999999999999999999999999999996 567888874
No 400
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=91.69 E-value=0.38 Score=48.76 Aligned_cols=31 Identities=23% Similarity=0.332 Sum_probs=28.5
Q ss_pred CccEEEECCChhHHH-HHHHHHhCCCcEEEEc
Q 042564 23 DFDLFVIGAGSGGVR-AARFSANFGAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~-aA~~l~~~g~~V~lve 53 (498)
..+|.|||.|-+|++ +|..|.+.|++|++.|
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D 53 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSD 53 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEE
Confidence 358999999999997 6999999999999999
No 401
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.54 E-value=0.15 Score=49.91 Aligned_cols=30 Identities=33% Similarity=0.589 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|+|||+|++|+.+|..|...|.+|+++|
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D 220 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATD 220 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEc
Confidence 579999999999999999999999999999
No 402
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=91.50 E-value=0.25 Score=49.69 Aligned_cols=40 Identities=25% Similarity=0.292 Sum_probs=35.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC--cEEEEccCCCCCCCCcCCCcccccc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA--KVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~--~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
+||+|||||++||+||++|++.|. +|+|+|+ ...+||.|.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa---------~~~~GG~~~ 44 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVES---------SERLGGWIR 44 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECS---------SSSSBTTCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeC---------CCCCCCceE
Confidence 699999999999999999999999 9999995 456777763
No 403
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=91.46 E-value=0.17 Score=51.57 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=32.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCC-CcEEEEeeCCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMG-STVDLLFRKELP 236 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g-~~V~lv~~~~~~ 236 (498)
.+|+|||+|..|+-+|..|.+.| .+|+++++.+++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 48999999999999999999999 999999988754
No 404
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=91.44 E-value=0.19 Score=50.77 Aligned_cols=36 Identities=31% Similarity=0.349 Sum_probs=32.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 468999999999999999999999999999987653
No 405
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.35 E-value=0.12 Score=47.66 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=29.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
...|+|||||..|...|..|.+.|.+|+||++
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcC
Confidence 35799999999999999999999999999993
No 406
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.24 E-value=0.2 Score=46.72 Aligned_cols=30 Identities=27% Similarity=0.284 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||+|.-|...|..+++.|++|+++|
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 479999999999999999999999999999
No 407
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=91.23 E-value=0.17 Score=49.14 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=31.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
.++|+|||+|.+|+-+|..|+ .|.+|+++++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 468999999999999999999 59999999997543
No 408
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.20 E-value=0.26 Score=40.38 Aligned_cols=34 Identities=9% Similarity=0.108 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC
Q 042564 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK 233 (498)
Q Consensus 200 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~ 233 (498)
..++++|+|.|..|..++..|.+.|.+|+++++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3468999999999999999999999999999874
No 409
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=90.92 E-value=0.23 Score=48.56 Aligned_cols=35 Identities=14% Similarity=0.355 Sum_probs=31.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
.+++|||+|.+|+.+|..|.+.|.+|+++++.+++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 37999999999999999999999999999987654
No 410
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=90.88 E-value=0.23 Score=49.43 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=31.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC-cEEEEeeCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGS-TVDLLFRKEL 235 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~-~V~lv~~~~~ 235 (498)
.+|+|||+|..|+-+|..|++.|. +|+++++.+.
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 479999999999999999999999 9999998764
No 411
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=90.83 E-value=0.21 Score=50.32 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=32.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+.+
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 468999999999999999999999999999998754
No 412
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=90.80 E-value=0.18 Score=49.41 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=30.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHH-CC-CcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRG-MG-STVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~-~g-~~V~lv~~~~ 234 (498)
.+|+|||+|..|+.+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 379999999999999999999 89 9999999876
No 413
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.72 E-value=0.23 Score=50.33 Aligned_cols=76 Identities=14% Similarity=0.133 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCHHHHH-HHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEE
Q 042564 200 LPKRAVVLGGGYIAVE-FASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVI 278 (498)
Q Consensus 200 ~~~~v~ViG~G~~g~e-~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~ 278 (498)
..+++.|||-|-+|+- +|..|.+.|.+|+..+.... + ..+.|++.|++++.+.....+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~------~-----~~~~l~~~gi~~~~g~~~~~~---------- 79 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN------S-----VTQHLTALGAQIYFHHRPENV---------- 79 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC------H-----HHHHHHHTTCEEESSCCGGGG----------
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC------H-----HHHHHHHCCCEEECCCCHHHc----------
Confidence 4579999999999996 89999999999999876431 2 234577889999876322111
Q ss_pred ECCCeEEEcCEEEEecCCCcCCCC
Q 042564 279 TDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 279 ~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
..+|.||++.|..|..+.
T Consensus 80 ------~~~d~vV~Spgi~~~~p~ 97 (494)
T 4hv4_A 80 ------LDASVVVVSTAISADNPE 97 (494)
T ss_dssp ------TTCSEEEECTTSCTTCHH
T ss_pred ------CCCCEEEECCCCCCCCHH
Confidence 137999999998776553
No 414
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.70 E-value=0.14 Score=51.10 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.+|.|||.|.+|+++|..|++.|++|++.|.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~ 36 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDT 36 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEES
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEEC
Confidence 4799999999999999999999999999994
No 415
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=90.67 E-value=0.25 Score=49.38 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=32.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
.+|+|||+|..|+-+|..|.+.|.+|+++++.+.+
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 47999999999999999999999999999987654
No 416
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=90.59 E-value=0.16 Score=52.28 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=31.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHH---CCCcEEEEeeCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRG---MGSTVDLLFRKE 234 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~---~g~~V~lv~~~~ 234 (498)
..+|+|||||..|+-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 999999999865
No 417
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=90.49 E-value=0.28 Score=48.16 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=31.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
.+++|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 48999999999999999999999999999987653
No 418
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=90.48 E-value=0.2 Score=50.12 Aligned_cols=31 Identities=32% Similarity=0.510 Sum_probs=29.4
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
..+|.|||.|.+|+++|..|++.|++|++.|
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D 39 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVND 39 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEe
Confidence 3579999999999999999999999999999
No 419
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=90.40 E-value=0.37 Score=49.26 Aligned_cols=82 Identities=18% Similarity=0.138 Sum_probs=56.4
Q ss_pred ccccCCCeEEEEcCCHHHHH-HHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCe
Q 042564 196 SLEELPKRAVVLGGGYIAVE-FASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG 274 (498)
Q Consensus 196 ~l~~~~~~v~ViG~G~~g~e-~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 274 (498)
.+....+++.+||-|-+|+- +|..|.+.|.+|+..+.... ++ ..+.|++.|++++.+.....+
T Consensus 14 ~~~~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~-----~~-----~~~~L~~~gi~~~~G~~~~~~------ 77 (524)
T 3hn7_A 14 NLYFQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY-----PP-----MSTQLEQAGVTIEEGYLIAHL------ 77 (524)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----TT-----HHHHHHHTTCEEEESCCGGGG------
T ss_pred ceeecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC-----cH-----HHHHHHHCCCEEECCCCHHHc------
Confidence 34445689999999999997 68899999999999987542 11 234567789998766322111
Q ss_pred EEEEECCCeEEEcCEEEEecCCCcCCCC
Q 042564 275 VKVITDHGEEIVADVVLFATGRAPNTKR 302 (498)
Q Consensus 275 ~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 302 (498)
...+|.||...|..|..+.
T Consensus 78 ---------~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 78 ---------QPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp ---------CSCCSEEEECTTCCTTSHH
T ss_pred ---------CCCCCEEEECCCcCCCCHH
Confidence 0137999999998776654
No 420
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=90.38 E-value=0.15 Score=52.41 Aligned_cols=42 Identities=17% Similarity=0.219 Sum_probs=37.4
Q ss_pred eEcCCCCCC-CCCCeEEecccCCCCCChHHHHHHHHHHHHHHh
Q 042564 318 VKVDENSRT-NVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVF 359 (498)
Q Consensus 318 i~vd~~~~t-~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 359 (498)
|..|+.++| +++++|+|||.++...-...|..+|..+|+.|+
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~ 539 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVA 539 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCChhhHHHHHHHHHHHHHHHHH
Confidence 788899999 899999999999987777788889999998875
No 421
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=90.36 E-value=0.32 Score=48.90 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=34.8
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCC-cEEEEccCCCCCCCCcCCCccccc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGA-KVGICELPFHPISSEVIGGVGGTC 71 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lvek~~~~~~~~~~~~~GG~~ 71 (498)
..+||+|||||++|+++|..|++.|. +|+|+|+ ...+||.|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~---------~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEA---------TDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECS---------SSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeC---------CCCCCCce
Confidence 45799999999999999999999998 8999995 34567766
No 422
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=90.31 E-value=0.26 Score=49.96 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=33.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 468999999999999999999999999999998764
No 423
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.20 E-value=0.28 Score=52.11 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=31.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 298 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQ 298 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 35899999999999999999999999999998653
No 424
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.19 E-value=0.44 Score=39.59 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=30.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK 233 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~ 233 (498)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 368999999999999999999999999999874
No 425
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=90.13 E-value=0.23 Score=47.21 Aligned_cols=63 Identities=17% Similarity=0.154 Sum_probs=42.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHH--CCCcEEEEeeCCCCCCC-------CC-HHHHHHHHHHHHhCCCEEEcCcc
Q 042564 202 KRAVVLGGGYIAVEFASIWRG--MGSTVDLLFRKELPLRG-------FD-DEMRAVVARNLEGRGINLHPRTT 264 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~--~g~~V~lv~~~~~~l~~-------~~-~~~~~~l~~~l~~~Gv~i~~~~~ 264 (498)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+.+-.. ++ ..+...+.+.+++.|+++..+..
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~ 138 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGD 138 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCc
Confidence 579999999999999999964 59999999987643110 11 01112234456677887776543
No 426
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.00 E-value=0.2 Score=48.54 Aligned_cols=30 Identities=27% Similarity=0.424 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|+|||+|..|+.+|..|...|.+|+++|
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D 214 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYD 214 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEe
Confidence 579999999999999999999999999999
No 427
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=89.98 E-value=0.21 Score=47.94 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=29.7
Q ss_pred eEEEEcCCHHHHHHHHHHHHCC------CcEEEEeeCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMG------STVDLLFRKE 234 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g------~~V~lv~~~~ 234 (498)
+|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999988 8999999874
No 428
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.90 E-value=0.33 Score=39.65 Aligned_cols=32 Identities=16% Similarity=0.157 Sum_probs=29.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK 233 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~ 233 (498)
++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 58999999999999999999999999999874
No 429
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=89.86 E-value=0.29 Score=51.84 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=31.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
.+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 589999999999999999999999999999864
No 430
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.78 E-value=0.25 Score=43.95 Aligned_cols=29 Identities=21% Similarity=0.145 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 25 DLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 25 dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
+++|||+|.-|...|..|.+.|.+|+++|
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid 30 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIIN 30 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 59999999999999999999999999999
No 431
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=89.68 E-value=0.26 Score=48.47 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=31.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCcEEEEeeCCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGM-GSTVDLLFRKELP 236 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~-g~~V~lv~~~~~~ 236 (498)
.+++|||+|..|+-+|..|++. |.+|+++++.+++
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 4799999999999999999998 9999999987643
No 432
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.53 E-value=0.34 Score=45.52 Aligned_cols=30 Identities=30% Similarity=0.375 Sum_probs=28.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||+|.-|...|..|++.|++|+++|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 469999999999999999999999999999
No 433
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.39 E-value=0.26 Score=47.67 Aligned_cols=32 Identities=31% Similarity=0.469 Sum_probs=29.5
Q ss_pred CccEEEECCChhHHHHHHHHHhCCC-cEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGA-KVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lvek 54 (498)
+-+|||+|||.||+.+|..|...|. +|+++|+
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~ 220 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDK 220 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEET
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEEC
Confidence 3579999999999999999999998 9999994
No 434
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=89.33 E-value=0.35 Score=49.28 Aligned_cols=43 Identities=30% Similarity=0.445 Sum_probs=37.1
Q ss_pred CCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccc
Q 042564 21 HFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 21 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
+.++||+|||||++|++||..|++.|++|+|+|+ ...+||.|.
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~---------~~~~GGr~~ 44 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEA---------RDRVGGRTY 44 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECS---------SSSSBTTCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeC---------CCCCCCcee
Confidence 3457999999999999999999999999999995 456777763
No 435
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.31 E-value=0.29 Score=48.11 Aligned_cols=30 Identities=33% Similarity=0.493 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
..|+|||+|.+|+.+|..|+..|.+|+++|
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D 202 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFD 202 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 579999999999999999999999999999
No 436
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=89.17 E-value=0.31 Score=47.27 Aligned_cols=33 Identities=12% Similarity=0.278 Sum_probs=30.5
Q ss_pred eEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 203 RAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 203 ~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
+++|||+|..|+-+|..|.+.|.+|+++++.++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 35 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNH 35 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 689999999999999999999999999998764
No 437
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.99 E-value=0.44 Score=45.02 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||.|.-|...|..|++.|++|+++|
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~d 51 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWN 51 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEe
Confidence 579999999999999999999999999999
No 438
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.95 E-value=0.33 Score=46.73 Aligned_cols=30 Identities=30% Similarity=0.325 Sum_probs=28.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||+|..|...|..|++.|.+|++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~ 34 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWD 34 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 479999999999999999999999999999
No 439
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.89 E-value=0.39 Score=45.64 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=28.4
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC-cEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA-KVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~-~V~lve 53 (498)
.+|.|||+|..|...|..|+..|. +|+|+|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~D 35 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFD 35 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 479999999999999999999998 999999
No 440
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=88.80 E-value=0.17 Score=50.61 Aligned_cols=75 Identities=19% Similarity=0.241 Sum_probs=53.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCCCCCCCHHHHHHHHHHHHhCCCEEEcCccEEEEEEeCCeEEEEEC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITD 280 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~ 280 (498)
+++|+|||.|.+|+..|..|.+.|.+|+..+....... . ..++ .|+++..+....+. +
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~--~--------~~l~-~G~~~~~g~~~~~~----------~- 62 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG--L--------DKLP-EAVERHTGSLNDEW----------L- 62 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT--G--------GGSC-TTSCEEESSCCHHH----------H-
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch--h--------HHhh-CCCEEEECCCcHHH----------h-
Confidence 47899999999999999999999999999987653210 1 2345 68888765321000 0
Q ss_pred CCeEEEcCEEEEecCCCcCCC
Q 042564 281 HGEEIVADVVLFATGRAPNTK 301 (498)
Q Consensus 281 ~g~~i~~D~vi~a~G~~p~~~ 301 (498)
. .+|.||+++|..|..+
T Consensus 63 ---~-~~d~vV~s~gi~~~~p 79 (439)
T 2x5o_A 63 ---M-AADLIVASPGIALAHP 79 (439)
T ss_dssp ---H-TCSEEEECTTSCTTCH
T ss_pred ---c-cCCEEEeCCCCCCCCH
Confidence 0 3789999999877554
No 441
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.74 E-value=0.4 Score=44.98 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=29.8
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
|+...+|.|||.|.-|...|..|++.|++|+++|+
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEECS
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 33345899999999999999999999999999993
No 442
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.67 E-value=0.37 Score=45.55 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||+|.-|..-|..++..|++|+|+|
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D 36 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEE
Confidence 369999999999999999999999999999
No 443
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=88.62 E-value=0.34 Score=45.93 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=28.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCC-cEEEEc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGA-KVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lve 53 (498)
..+|.|||+|.-|...|..|++.|. +|+++|
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D 35 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFD 35 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 3579999999999999999999998 999999
No 444
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.54 E-value=0.37 Score=46.62 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
+.|+|||||.-|..+|+.+++.|++|+++|.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~ 32 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDK 32 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4799999999999999999999999999994
No 445
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=88.48 E-value=0.42 Score=49.32 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=31.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
.-.|+|||||..|+-+|..+++.|.+|.++++.+
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3489999999999999999999999999999974
No 446
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.48 E-value=0.36 Score=47.19 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=29.0
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
..+|+|||+|.+|+.+|..|+..|.+|+++|
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d 202 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATD 202 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3579999999999999999999999999999
No 447
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.46 E-value=0.58 Score=37.78 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=29.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK 233 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~ 233 (498)
.+++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 47999999999999999999999999999873
No 448
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=88.39 E-value=0.3 Score=48.70 Aligned_cols=31 Identities=19% Similarity=0.176 Sum_probs=29.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCC-CcEEEEee
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMG-STVDLLFR 232 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g-~~V~lv~~ 232 (498)
.+|+|||+|..|+-+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 449
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.17 E-value=0.47 Score=36.99 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=29.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCC-CcEEEEeeC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMG-STVDLLFRK 233 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g-~~V~lv~~~ 233 (498)
++++|+|+|.+|..++..|.+.| .+|+++.|.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 58999999999999999999999 789888874
No 450
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=87.88 E-value=0.42 Score=45.62 Aligned_cols=30 Identities=20% Similarity=0.154 Sum_probs=28.3
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC-cEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA-KVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~-~V~lve 53 (498)
.+|.|||+|.-|.+.|..|++.|+ +|+|+|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D 40 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYD 40 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 479999999999999999999888 999999
No 451
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.80 E-value=0.42 Score=46.26 Aligned_cols=30 Identities=30% Similarity=0.567 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
..|+|+|+|.+|..++..|+..|.+|+++|
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~d 197 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFD 197 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 579999999999999999999999999999
No 452
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=87.76 E-value=0.58 Score=47.26 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=32.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCC-CcEEEEeeCCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMG-STVDLLFRKELP 236 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g-~~V~lv~~~~~~ 236 (498)
..+++|||+|..|+-+|..|.+.| .+|+++++.+.+
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 358999999999999999999998 799999988653
No 453
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=87.71 E-value=0.52 Score=49.69 Aligned_cols=36 Identities=19% Similarity=0.354 Sum_probs=33.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELP 236 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 236 (498)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 469999999999999999999999999999987754
No 454
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=87.69 E-value=0.39 Score=46.37 Aligned_cols=32 Identities=22% Similarity=0.447 Sum_probs=29.4
Q ss_pred CccEEEECCChhHHHHHHHHHhCCC-cEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGA-KVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lvek 54 (498)
+.+|+|+|+|.+|..+|..|...|. +|+++|+
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr 224 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDR 224 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEET
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEEC
Confidence 4589999999999999999999998 8999994
No 455
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=87.55 E-value=0.64 Score=45.22 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=29.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
...|.|||+|.-|...+..+++.|++|.++|.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~ 43 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDP 43 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 45799999999999999999999999999993
No 456
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=87.54 E-value=0.55 Score=50.84 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=32.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKEL 235 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 235 (498)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 36899999999999999999999999999997754
No 457
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.53 E-value=0.46 Score=45.06 Aligned_cols=30 Identities=27% Similarity=0.422 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||+|.-|.+.|..|++.|.+|++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~ 32 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVS 32 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEe
Confidence 479999999999999999999999999999
No 458
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.32 E-value=0.62 Score=37.79 Aligned_cols=32 Identities=22% Similarity=0.169 Sum_probs=29.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGSTVDLLFRK 233 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~ 233 (498)
++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999998764
No 459
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=87.31 E-value=0.5 Score=44.72 Aligned_cols=30 Identities=33% Similarity=0.359 Sum_probs=28.4
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC--cEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA--KVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~--~V~lve 53 (498)
.+|+|||+|..|...|..|++.|. +|+++|
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d 39 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLED 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 379999999999999999999998 999999
No 460
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.17 E-value=0.5 Score=44.62 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=28.2
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||+|.-|.+.|..|++.|.+|++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~ 32 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLL 32 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEE
Confidence 479999999999999999999999999999
No 461
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.09 E-value=0.56 Score=44.47 Aligned_cols=30 Identities=27% Similarity=0.204 Sum_probs=28.4
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC--cEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA--KVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~--~V~lve 53 (498)
.+|+|||+|..|.+.|..|+..+. +++++|
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~D 39 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLID 39 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 589999999999999999999887 999999
No 462
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.05 E-value=0.42 Score=43.54 Aligned_cols=31 Identities=19% Similarity=0.475 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC-cEEEEcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA-KVGICEL 54 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~-~V~lvek 54 (498)
.+|+|||+|..|..+|..|++.|. +++|+|.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~ 63 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDF 63 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 579999999999999999999997 8999993
No 463
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=86.84 E-value=0.62 Score=44.48 Aligned_cols=30 Identities=20% Similarity=0.251 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||+|.-|.+.|..|++.|.+|++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 379999999999999999999999999999
No 464
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.74 E-value=0.33 Score=45.88 Aligned_cols=34 Identities=18% Similarity=0.332 Sum_probs=30.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
.++|.|||+|..|.-+|..++..|.+|++++..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999998754
No 465
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.70 E-value=0.78 Score=40.45 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 200 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
...++.|||.|.+|.-+|..|.+.|.+|+++.|.+
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35689999999999999999999999999998764
No 466
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.50 E-value=0.77 Score=42.20 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=29.5
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
...++|||+|-+|.++|..|++.|.+|+|+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nR 149 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNR 149 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 45799999999999999999999999999993
No 467
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=86.50 E-value=0.69 Score=45.18 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=30.1
Q ss_pred CCccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 22 FDFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 22 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
....|+|||+|..|...|..+++.|++|.++|.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~ 45 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDP 45 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 345899999999999999999999999999993
No 468
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=86.31 E-value=0.59 Score=50.75 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=31.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC-cEEEEeeCCC
Q 042564 202 KRAVVLGGGYIAVEFASIWRGMGS-TVDLLFRKEL 235 (498)
Q Consensus 202 ~~v~ViG~G~~g~e~a~~l~~~g~-~V~lv~~~~~ 235 (498)
.+|+|||+|.+|+-+|..|++.|. +|+++++.+.
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 479999999999999999999998 9999998764
No 469
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=86.30 E-value=2.2 Score=44.35 Aligned_cols=47 Identities=26% Similarity=0.287 Sum_probs=40.7
Q ss_pred cccCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEccCCCCCCCCcCCCcccccc
Q 042564 17 EEQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 17 ~~~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
++.|..+||++|||+|..|...|..|++.|++|++||+ +..+||.|.
T Consensus 2 ~~~~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~---------~~~~gg~~~ 48 (650)
T 1vg0_A 2 ADNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDS---------RSYYGGNWA 48 (650)
T ss_dssp -CCCCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECS---------SSSSCGGGC
T ss_pred CccCCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcC---------CCcccCccc
Confidence 34555679999999999999999999999999999996 677888763
No 470
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=86.29 E-value=0.77 Score=46.05 Aligned_cols=41 Identities=22% Similarity=0.343 Sum_probs=35.6
Q ss_pred CccEEEECCChhHHHHHHHHHhCC--CcEEEEccCCCCCCCCcCCCcccccc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFG--AKVGICELPFHPISSEVIGGVGGTCV 72 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lvek~~~~~~~~~~~~~GG~~~ 72 (498)
++||+|||||++|+++|++|++.| .+|+|+|+ ...+||.|.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~---------~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEA---------GERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECS---------SSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEEC---------CCCCCceeE
Confidence 479999999999999999999999 99999995 456677653
No 471
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.24 E-value=0.65 Score=44.05 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=28.3
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC-cEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA-KVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~-~V~lve 53 (498)
.+|.|||+|..|.+.|..|+..|. +|+|+|
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~D 38 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFD 38 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 479999999999999999999888 999999
No 472
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.22 E-value=0.6 Score=43.88 Aligned_cols=29 Identities=24% Similarity=0.362 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 25 DLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 25 dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
+|.|||+|.-|...|..|++.|++|++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLID 33 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEE
Confidence 69999999999999999999999999999
No 473
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.13 E-value=0.67 Score=44.66 Aligned_cols=30 Identities=33% Similarity=0.399 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||+|.-|.+.|..|++.|.+|++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~ 59 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWS 59 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEe
Confidence 479999999999999999999999999999
No 474
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.00 E-value=0.78 Score=43.31 Aligned_cols=30 Identities=30% Similarity=0.284 Sum_probs=28.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC-cEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA-KVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~-~V~lve 53 (498)
.+|.|||+|.-|.+.|..|+..|. +|+++|
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D 39 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVD 39 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 579999999999999999999999 999999
No 475
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=85.90 E-value=0.62 Score=46.88 Aligned_cols=30 Identities=30% Similarity=0.447 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||.|.-|+..|..|++.|++|+++|
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d 38 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLD 38 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEE
Confidence 479999999999999999999999999999
No 476
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=85.86 E-value=0.57 Score=46.06 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=31.3
Q ss_pred ccCCCCccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 18 EQTHFDFDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 18 ~~~~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
..|+....|.|+|||..|...+..+++.|++|.++|
T Consensus 19 ~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 19 GHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 455555789999999999999999999999999999
No 477
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.79 E-value=0.62 Score=45.17 Aligned_cols=30 Identities=30% Similarity=0.592 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
..|+|+|+|..|..+|..|+..|.+|+++|
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d 196 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILD 196 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEE
Confidence 579999999999999999999999999999
No 478
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=85.71 E-value=0.93 Score=42.61 Aligned_cols=31 Identities=35% Similarity=0.533 Sum_probs=29.3
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
..+|.|||.|.-|...|..|++.|++|+++|
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3579999999999999999999999999999
No 479
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=85.67 E-value=0.32 Score=39.98 Aligned_cols=31 Identities=16% Similarity=0.198 Sum_probs=28.5
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
...++|||+|..|...|..|++.|.+|++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~ 51 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAG 51 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEc
Confidence 3579999999999999999999999999999
No 480
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.66 E-value=0.73 Score=41.76 Aligned_cols=32 Identities=28% Similarity=0.389 Sum_probs=29.8
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
..+|.|||+|.-|.+.|..|++.|++|+++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 45799999999999999999999999999993
No 481
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=85.57 E-value=2.5 Score=43.05 Aligned_cols=30 Identities=13% Similarity=0.236 Sum_probs=27.1
Q ss_pred ccEEEECCChhHHHH-HHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRA-ARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~a-A~~l~~~g~~V~lve 53 (498)
.+|.|||-|-+|+++ |..|.+.|++|.+.|
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD 50 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALGHTVTGSD 50 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEEecHhhHHHHHHHHHhCCCEEEEEC
Confidence 479999999999985 777888999999999
No 482
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.48 E-value=0.66 Score=45.14 Aligned_cols=30 Identities=43% Similarity=0.712 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
..|+|||+|..|..+|..|+..|.+|+++|
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d 198 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLD 198 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 579999999999999999999999999999
No 483
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=85.26 E-value=0.63 Score=42.88 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCcEEEEeeCC
Q 042564 200 LPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKE 234 (498)
Q Consensus 200 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~lv~~~~ 234 (498)
..++|+|||+|.+|...+..|.+.|.+|+++.+..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35899999999999999999999999999998743
No 484
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=85.15 E-value=0.74 Score=43.29 Aligned_cols=29 Identities=24% Similarity=0.240 Sum_probs=27.8
Q ss_pred cEEEECCChhHHHHHHHHHhCCC--cEEEEc
Q 042564 25 DLFVIGAGSGGVRAARFSANFGA--KVGICE 53 (498)
Q Consensus 25 dvvIIGgG~aGl~aA~~l~~~g~--~V~lve 53 (498)
+|+|||+|..|.+.|..|+..|. +|+++|
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D 32 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVD 32 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 59999999999999999999998 999999
No 485
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=85.13 E-value=0.8 Score=43.56 Aligned_cols=30 Identities=23% Similarity=0.239 Sum_probs=28.5
Q ss_pred ccEEEECCChhHHHHHHHHHhCCC-cEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGA-KVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~-~V~lve 53 (498)
.+|.|||+|.-|...|..|+..|+ +|+|+|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~D 45 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFD 45 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 479999999999999999999998 999999
No 486
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=85.11 E-value=0.73 Score=46.00 Aligned_cols=30 Identities=33% Similarity=0.501 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||.|.-|+..|..|++.|++|+++|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D 32 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCID 32 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEE
Confidence 379999999999999999999999999999
No 487
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.92 E-value=0.81 Score=45.07 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|+|||.|..|...|..|.+.|.+|++||
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId 34 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLD 34 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 469999999999999999999999999999
No 488
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.76 E-value=0.92 Score=38.82 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=30.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCcEEEEeeC
Q 042564 201 PKRAVVLGGGYIAVEFASIWRGM-GSTVDLLFRK 233 (498)
Q Consensus 201 ~~~v~ViG~G~~g~e~a~~l~~~-g~~V~lv~~~ 233 (498)
.++++|+|.|.+|..++..|.+. |.+|+++++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 45899999999999999999998 9999999874
No 489
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.73 E-value=0.46 Score=47.63 Aligned_cols=31 Identities=19% Similarity=0.298 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.+++|+|+|--|...|..|.+.|++|++||+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~ 34 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDK 34 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 3699999999999999999999999999993
No 490
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=84.71 E-value=0.96 Score=41.87 Aligned_cols=30 Identities=20% Similarity=0.100 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 25 DLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 25 dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
+|.|||+|.-|...|..|++.|++|+++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEc
Confidence 589999999999999999999999999993
No 491
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.70 E-value=0.87 Score=40.13 Aligned_cols=31 Identities=16% Similarity=0.198 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
.++.|||+|.-|.+.|..|++.|.+|+++++
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 4799999999999999999999999999994
No 492
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.66 E-value=0.69 Score=46.30 Aligned_cols=31 Identities=29% Similarity=0.475 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
..|+|||||..|...+..|.+.|.+|+|+++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~ 43 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNAL 43 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcC
Confidence 5799999999999999999999999999993
No 493
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=84.65 E-value=0.89 Score=41.90 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=28.6
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
..++|+|+|.+|.++|..|++.|.+|++++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~ 149 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITN 149 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEE
Confidence 579999999999999999999999999999
No 494
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.61 E-value=0.84 Score=43.23 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||+|.-|...|..+++.|++|+++|
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d 36 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEe
Confidence 479999999999999999999999999999
No 495
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=84.53 E-value=0.88 Score=44.13 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=29.1
Q ss_pred CccEEEECC-ChhHHHHHHHHHhCCC---cEEEEc
Q 042564 23 DFDLFVIGA-GSGGVRAARFSANFGA---KVGICE 53 (498)
Q Consensus 23 ~~dvvIIGg-G~aGl~aA~~l~~~g~---~V~lve 53 (498)
..+|+|||| |.+|+.|+..+...|. +|+++|
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D 248 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWD 248 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEee
Confidence 358999999 9999999999999997 999999
No 496
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=84.52 E-value=0.74 Score=43.57 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=29.5
Q ss_pred CCCCccEEEECCChhHHHHHHHHHhCCC--cEEEEc
Q 042564 20 THFDFDLFVIGAGSGGVRAARFSANFGA--KVGICE 53 (498)
Q Consensus 20 ~~~~~dvvIIGgG~aGl~aA~~l~~~g~--~V~lve 53 (498)
|.++.+|+|||+|..|.+.|..|+..+. ++.|+|
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~D 37 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVD 37 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEe
Confidence 3444689999999999999999998765 899999
No 497
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=84.41 E-value=0.86 Score=42.74 Aligned_cols=30 Identities=30% Similarity=0.356 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 24 FDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 24 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
.+|.|||.|.-|...|..|++.|++|+++|
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~d 37 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGAD 37 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 479999999999999999999999999999
No 498
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=84.41 E-value=0.89 Score=43.23 Aligned_cols=32 Identities=22% Similarity=0.449 Sum_probs=29.3
Q ss_pred CccEEEECCChhHHHHHHHHHhCCC-cEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGA-KVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lvek 54 (498)
..+|+|||+|-.|..+|..|++.|. +++|+|.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~ 66 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN 66 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecC
Confidence 4689999999999999999999996 8999993
No 499
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=83.96 E-value=1.1 Score=44.67 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=30.0
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEcc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICEL 54 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lvek 54 (498)
+.++.|||.|.-|+..|..|++.|++|+++|.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 46899999999999999999999999999993
No 500
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=83.94 E-value=0.79 Score=45.36 Aligned_cols=31 Identities=32% Similarity=0.181 Sum_probs=29.4
Q ss_pred CccEEEECCChhHHHHHHHHHhCCCcEEEEc
Q 042564 23 DFDLFVIGAGSGGVRAARFSANFGAKVGICE 53 (498)
Q Consensus 23 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lve 53 (498)
+..+.|||.|.-|+..|..+++.|++|+.+|
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~D 51 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYD 51 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEE
Confidence 4589999999999999999999999999999
Done!