Query 042568
Match_columns 983
No_of_seqs 913 out of 6541
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 07:25:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042568.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042568hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-110 5E-115 1063.7 63.4 878 32-970 27-956 (968)
2 PLN00113 leucine-rich repeat r 100.0 5.7E-55 1.2E-59 555.9 31.6 467 79-562 142-609 (968)
3 KOG1187 Serine/threonine prote 100.0 6E-50 1.3E-54 441.0 24.0 291 653-968 61-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 5.8E-46 1.2E-50 382.8 19.4 260 656-962 75-336 (364)
5 KOG0615 Serine/threonine prote 100.0 4E-45 8.7E-50 377.8 12.8 255 667-963 172-439 (475)
6 KOG0192 Tyrosine kinase specif 100.0 7.6E-44 1.6E-48 388.9 23.2 259 672-971 46-309 (362)
7 KOG0575 Polo-like serine/threo 100.0 1.5E-43 3.3E-48 385.6 20.1 251 667-963 18-271 (592)
8 KOG0591 NIMA (never in mitosis 100.0 1E-44 2.2E-49 356.0 8.7 257 669-963 21-283 (375)
9 KOG0595 Serine/threonine-prote 100.0 7.4E-43 1.6E-47 362.2 18.4 200 666-886 9-216 (429)
10 KOG0472 Leucine-rich repeat pr 100.0 7.7E-46 1.7E-50 380.1 -12.8 475 79-584 47-541 (565)
11 KOG0593 Predicted protein kina 100.0 6.3E-42 1.4E-46 339.9 14.5 271 667-961 2-284 (396)
12 KOG0197 Tyrosine kinases [Sign 100.0 2E-41 4.4E-46 366.2 19.1 254 672-969 211-465 (468)
13 KOG0598 Ribosomal protein S6 k 100.0 3.9E-41 8.4E-46 347.2 16.3 249 666-959 24-279 (357)
14 KOG0193 Serine/threonine prote 100.0 2.3E-41 5.1E-46 365.9 12.3 257 670-967 395-655 (678)
15 KOG0592 3-phosphoinositide-dep 100.0 1.5E-40 3.3E-45 355.3 17.5 266 664-962 70-339 (604)
16 KOG0578 p21-activated serine/t 100.0 1.1E-40 2.5E-45 360.3 16.2 249 668-961 274-523 (550)
17 KOG0659 Cdk activating kinase 100.0 3.9E-40 8.5E-45 322.1 18.4 267 667-962 2-282 (318)
18 KOG0661 MAPK related serine/th 100.0 3.2E-41 6.9E-46 355.0 11.5 272 666-962 9-292 (538)
19 KOG0582 Ste20-like serine/thre 100.0 2.1E-40 4.6E-45 346.1 17.4 265 667-961 26-293 (516)
20 KOG4721 Serine/threonine prote 100.0 3.6E-40 7.7E-45 351.1 13.5 265 653-978 117-382 (904)
21 KOG0472 Leucine-rich repeat pr 100.0 7.3E-44 1.6E-48 365.6 -14.3 451 78-561 69-541 (565)
22 KOG0600 Cdc2-related protein k 100.0 1.2E-39 2.6E-44 345.8 17.1 272 668-961 118-400 (560)
23 KOG4194 Membrane glycoprotein 100.0 4.6E-41 9.9E-46 359.5 5.6 363 102-481 79-444 (873)
24 KOG0198 MEKK and related serin 100.0 1.1E-39 2.4E-44 344.4 14.7 262 667-968 17-283 (313)
25 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.4E-39 2E-43 357.9 21.5 264 666-967 6-336 (338)
26 KOG0597 Serine-threonine prote 100.0 2.1E-39 4.6E-44 345.8 14.4 248 667-961 2-251 (808)
27 KOG2052 Activin A type IB rece 100.0 8.4E-39 1.8E-43 333.9 18.5 266 667-967 211-505 (513)
28 KOG1026 Nerve growth factor re 100.0 2.3E-39 4.9E-44 367.0 14.8 265 670-973 489-770 (774)
29 KOG4194 Membrane glycoprotein 100.0 6E-40 1.3E-44 351.0 8.8 370 126-560 79-451 (873)
30 KOG0605 NDR and related serine 100.0 1.1E-38 2.4E-43 341.9 18.2 267 665-961 139-445 (550)
31 KOG0201 Serine/threonine prote 100.0 1.6E-39 3.6E-44 339.8 11.3 249 668-961 14-263 (467)
32 KOG0583 Serine/threonine prote 100.0 3.1E-38 6.8E-43 348.7 20.5 253 665-963 15-277 (370)
33 KOG3653 Transforming growth fa 100.0 8.8E-38 1.9E-42 328.8 21.2 277 671-970 214-508 (534)
34 KOG0580 Serine/threonine prote 100.0 7.1E-39 1.5E-43 308.9 11.9 254 665-964 20-276 (281)
35 KOG0658 Glycogen synthase kina 100.0 5.5E-39 1.2E-43 330.3 11.3 269 668-961 25-306 (364)
36 KOG0588 Serine/threonine prote 100.0 2.3E-38 5E-43 345.3 15.8 251 667-964 12-266 (786)
37 KOG0663 Protein kinase PITSLRE 100.0 4.2E-38 9.1E-43 316.9 15.7 275 667-962 76-362 (419)
38 KOG0616 cAMP-dependent protein 100.0 4.7E-38 1E-42 312.1 15.2 237 667-952 44-283 (355)
39 cd05096 PTKc_DDR1 Catalytic do 100.0 1.4E-37 3.1E-42 342.8 20.8 265 667-963 5-303 (304)
40 KOG2345 Serine/threonine prote 100.0 8.6E-39 1.9E-43 309.6 9.4 273 665-965 19-300 (302)
41 PHA02988 hypothetical protein; 100.0 3E-37 6.5E-42 335.7 22.5 250 672-968 25-282 (283)
42 KOG0660 Mitogen-activated prot 100.0 4.1E-38 8.8E-43 323.3 13.8 288 661-972 16-323 (359)
43 KOG0585 Ca2+/calmodulin-depend 100.0 1.4E-37 3.1E-42 326.8 17.9 264 665-967 95-378 (576)
44 cd06649 PKc_MEK2 Catalytic dom 100.0 4.7E-37 1E-41 342.5 22.5 272 666-963 4-303 (331)
45 KOG0196 Tyrosine kinase, EPH ( 100.0 1.6E-38 3.4E-43 351.4 10.0 259 670-969 632-895 (996)
46 KOG0611 Predicted serine/threo 100.0 3.8E-38 8.3E-43 323.0 11.6 248 668-963 54-305 (668)
47 cd05106 PTKc_CSF-1R Catalytic 100.0 5.5E-37 1.2E-41 346.7 22.2 262 667-966 38-373 (374)
48 cd05104 PTKc_Kit Catalytic dom 100.0 7.4E-37 1.6E-41 346.0 23.0 261 667-965 35-374 (375)
49 KOG0694 Serine/threonine prote 100.0 4.1E-37 8.9E-42 339.0 19.9 243 666-955 367-613 (694)
50 cd05631 STKc_GRK4 Catalytic do 100.0 1E-36 2.3E-41 332.4 19.7 253 668-961 1-261 (285)
51 cd05612 STKc_PRKX_like Catalyt 100.0 5.7E-37 1.2E-41 335.5 17.5 247 667-962 1-255 (291)
52 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.9E-36 4.1E-41 327.0 21.2 256 667-965 5-265 (266)
53 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.7E-36 3.7E-41 334.1 21.2 275 666-961 4-288 (303)
54 KOG0599 Phosphorylase kinase g 100.0 1.8E-37 3.9E-42 303.1 11.7 258 664-964 14-286 (411)
55 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.2E-36 2.6E-41 332.5 19.2 273 667-961 5-285 (288)
56 KOG0594 Protein kinase PCTAIRE 100.0 7.9E-37 1.7E-41 315.8 16.6 278 669-965 13-308 (323)
57 KOG0589 Serine/threonine prote 100.0 3.6E-37 7.9E-42 332.6 14.4 252 667-961 4-258 (426)
58 cd05571 STKc_PKB Catalytic dom 100.0 8.1E-37 1.8E-41 339.3 17.5 243 673-961 1-251 (323)
59 cd05048 PTKc_Ror Catalytic Dom 100.0 3.5E-36 7.5E-41 328.4 22.0 258 668-964 6-282 (283)
60 cd05054 PTKc_VEGFR Catalytic d 100.0 2.9E-36 6.2E-41 336.2 21.6 263 667-967 7-335 (337)
61 cd06650 PKc_MEK1 Catalytic dom 100.0 4.9E-36 1.1E-40 334.2 23.4 271 666-962 4-300 (333)
62 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.8E-36 6.1E-41 341.8 21.8 264 666-967 36-399 (400)
63 KOG0194 Protein tyrosine kinas 100.0 6.8E-37 1.5E-41 337.3 15.5 258 671-971 161-426 (474)
64 PTZ00263 protein kinase A cata 100.0 8.2E-37 1.8E-41 340.0 16.3 246 667-961 18-271 (329)
65 PLN00034 mitogen-activated pro 100.0 2.3E-36 5E-41 340.1 20.1 248 669-962 76-329 (353)
66 KOG0033 Ca2+/calmodulin-depend 100.0 2.1E-38 4.7E-43 305.1 3.0 255 666-963 10-269 (355)
67 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.6E-36 3.6E-41 338.7 17.9 254 667-961 1-257 (333)
68 cd07848 STKc_CDKL5 Catalytic d 100.0 3.2E-36 6.9E-41 329.4 19.5 274 667-961 1-284 (287)
69 cd05033 PTKc_EphR Catalytic do 100.0 9.4E-36 2E-40 321.8 22.8 257 667-965 4-265 (266)
70 cd05108 PTKc_EGFR Catalytic do 100.0 9.2E-36 2E-40 330.2 23.3 259 667-968 7-271 (316)
71 cd05049 PTKc_Trk Catalytic dom 100.0 7.3E-36 1.6E-40 325.3 21.4 258 667-963 5-279 (280)
72 cd08228 STKc_Nek6 Catalytic do 100.0 8E-36 1.7E-40 322.6 21.4 262 667-966 2-266 (267)
73 cd05595 STKc_PKB_beta Catalyti 100.0 4.1E-36 8.8E-41 333.5 19.5 243 673-961 1-251 (323)
74 KOG1095 Protein tyrosine kinas 100.0 3.7E-36 8E-41 353.6 19.7 261 670-969 695-965 (1025)
75 PTZ00426 cAMP-dependent protei 100.0 3.4E-36 7.4E-41 335.5 18.5 246 667-961 30-284 (340)
76 cd05585 STKc_YPK1_like Catalyt 100.0 3.3E-36 7.1E-41 332.9 17.9 241 675-961 1-247 (312)
77 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.9E-35 4E-40 317.5 22.9 250 668-962 5-255 (256)
78 KOG1989 ARK protein kinase fam 100.0 1.7E-36 3.7E-41 345.8 15.5 273 668-976 38-322 (738)
79 cd07862 STKc_CDK6 Catalytic do 100.0 6E-36 1.3E-40 327.8 19.2 273 667-961 1-287 (290)
80 PHA03212 serine/threonine kina 100.0 6.9E-36 1.5E-40 338.6 20.3 271 666-963 91-378 (391)
81 cd05593 STKc_PKB_gamma Catalyt 100.0 5.4E-36 1.2E-40 333.1 19.0 243 673-961 1-251 (328)
82 KOG0618 Serine/threonine phosp 100.0 1.1E-38 2.4E-43 359.7 -2.6 439 78-559 46-487 (1081)
83 PTZ00283 serine/threonine prot 100.0 4.6E-36 9.9E-41 349.5 18.8 259 664-961 29-297 (496)
84 cd05072 PTKc_Lyn Catalytic dom 100.0 1.3E-35 2.7E-40 319.8 20.8 255 667-965 6-261 (261)
85 PTZ00267 NIMA-related protein 100.0 9.2E-36 2E-40 347.2 21.2 254 668-961 68-323 (478)
86 cd05062 PTKc_IGF-1R Catalytic 100.0 1.1E-35 2.4E-40 323.3 20.2 261 665-964 4-277 (277)
87 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-35 3.7E-40 322.8 21.7 269 670-966 7-282 (283)
88 KOG0574 STE20-like serine/thre 100.0 4.7E-38 1E-42 310.7 1.3 248 669-961 35-283 (502)
89 KOG1094 Discoidin domain recep 100.0 2.6E-36 5.6E-41 323.4 14.7 264 668-965 539-804 (807)
90 PF07714 Pkinase_Tyr: Protein 100.0 5.7E-36 1.2E-40 321.6 17.6 250 672-962 4-259 (259)
91 cd05084 PTKc_Fes Catalytic dom 100.0 2.3E-35 5.1E-40 315.9 22.2 249 673-963 1-251 (252)
92 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.4E-36 1.6E-40 334.7 18.8 273 668-961 1-290 (338)
93 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-35 2.5E-40 337.8 20.0 265 668-961 2-305 (381)
94 cd05093 PTKc_TrkB Catalytic do 100.0 5.3E-35 1.1E-39 319.7 24.1 263 667-969 5-283 (288)
95 cd05599 STKc_NDR_like Catalyti 100.0 7.8E-36 1.7E-40 337.8 18.1 265 667-961 1-296 (364)
96 cd05111 PTK_HER3 Pseudokinase 100.0 6.3E-35 1.4E-39 317.5 24.5 258 667-967 7-270 (279)
97 cd05090 PTKc_Ror1 Catalytic do 100.0 2.7E-35 5.9E-40 321.3 21.6 258 668-964 6-282 (283)
98 cd05584 STKc_p70S6K Catalytic 100.0 1.1E-35 2.4E-40 330.2 18.8 243 673-961 2-256 (323)
99 cd05068 PTKc_Frk_like Catalyti 100.0 4.2E-35 9.1E-40 315.7 22.7 255 667-965 6-261 (261)
100 cd05589 STKc_PKN Catalytic dom 100.0 1.6E-35 3.5E-40 329.2 19.6 246 669-961 1-257 (324)
101 cd05052 PTKc_Abl Catalytic dom 100.0 4.2E-35 9.1E-40 316.1 22.2 254 668-965 7-262 (263)
102 cd05043 PTK_Ryk Pseudokinase d 100.0 3.9E-35 8.5E-40 319.5 22.0 264 666-968 5-279 (280)
103 cd05608 STKc_GRK1 Catalytic do 100.0 2.3E-35 5E-40 321.0 20.1 249 675-961 1-257 (280)
104 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-35 4.5E-40 333.5 20.3 213 667-886 1-238 (363)
105 PRK13184 pknD serine/threonine 100.0 1.8E-35 3.9E-40 351.3 20.6 276 667-968 2-293 (932)
106 KOG0584 Serine/threonine prote 100.0 9.7E-37 2.1E-41 332.9 8.9 246 671-961 44-296 (632)
107 cd08229 STKc_Nek7 Catalytic do 100.0 3E-35 6.4E-40 318.1 20.4 262 667-966 2-266 (267)
108 cd05629 STKc_NDR_like_fungal C 100.0 1.2E-35 2.6E-40 337.4 18.0 266 667-962 1-306 (377)
109 cd05051 PTKc_DDR Catalytic dom 100.0 4.2E-35 9E-40 322.2 21.7 265 667-963 5-295 (296)
110 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.8E-35 1.5E-39 330.2 24.0 261 668-966 38-400 (401)
111 cd05045 PTKc_RET Catalytic dom 100.0 5.8E-35 1.3E-39 319.8 22.7 261 668-967 1-288 (290)
112 cd05097 PTKc_DDR_like Catalyti 100.0 3.3E-35 7.2E-40 322.5 20.7 265 667-963 5-294 (295)
113 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.4E-35 9.6E-40 323.4 21.8 265 667-970 18-304 (307)
114 cd05094 PTKc_TrkC Catalytic do 100.0 5.3E-35 1.2E-39 320.2 22.2 262 668-969 6-286 (291)
115 cd06619 PKc_MKK5 Catalytic dom 100.0 4.8E-35 1E-39 318.5 21.4 253 668-963 2-255 (279)
116 PTZ00036 glycogen synthase kin 100.0 2.2E-35 4.7E-40 340.0 19.7 271 666-961 65-351 (440)
117 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-34 2.5E-39 311.3 24.0 250 674-965 2-255 (257)
118 cd05091 PTKc_Ror2 Catalytic do 100.0 2.6E-35 5.7E-40 321.4 19.3 257 669-964 7-282 (283)
119 cd05071 PTKc_Src Catalytic dom 100.0 8.4E-35 1.8E-39 313.4 23.0 254 667-965 6-260 (262)
120 cd05594 STKc_PKB_alpha Catalyt 100.0 8.9E-36 1.9E-40 331.4 15.9 243 673-961 1-252 (325)
121 cd05573 STKc_ROCK_NDR_like Cat 100.0 9E-36 1.9E-40 335.7 16.1 265 667-961 1-285 (350)
122 KOG0444 Cytoskeletal regulator 100.0 5.9E-38 1.3E-42 337.0 -1.6 365 99-535 5-373 (1255)
123 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.2E-35 1.4E-39 313.3 21.7 251 668-963 5-256 (256)
124 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.9E-35 1.5E-39 321.5 22.6 264 666-968 14-299 (304)
125 cd05055 PTKc_PDGFR Catalytic d 100.0 8.7E-35 1.9E-39 319.9 23.3 259 667-965 35-301 (302)
126 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.4E-35 1.8E-39 314.6 22.8 262 667-966 2-266 (267)
127 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.1E-35 8.8E-40 324.0 20.7 274 667-962 6-287 (309)
128 cd05103 PTKc_VEGFR2 Catalytic 100.0 8E-35 1.7E-39 326.0 23.4 264 667-968 7-342 (343)
129 cd05590 STKc_nPKC_eta Catalyti 100.0 1.9E-35 4.2E-40 327.6 18.0 243 673-961 1-253 (320)
130 KOG0577 Serine/threonine prote 100.0 2.5E-36 5.3E-41 323.1 10.2 243 672-962 31-279 (948)
131 cd05614 STKc_MSK2_N N-terminal 100.0 2.3E-35 5E-40 329.5 18.6 253 668-961 1-267 (332)
132 cd05059 PTKc_Tec_like Catalyti 100.0 9.7E-35 2.1E-39 311.9 22.7 250 668-962 5-255 (256)
133 cd05596 STKc_ROCK Catalytic do 100.0 2E-35 4.2E-40 333.7 18.1 254 666-961 42-304 (370)
134 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.8E-35 1.5E-39 318.3 21.7 272 668-965 5-283 (284)
135 cd05053 PTKc_FGFR Catalytic do 100.0 7E-35 1.5E-39 319.8 21.9 262 666-966 11-292 (293)
136 cd05109 PTKc_HER2 Catalytic do 100.0 1.5E-34 3.2E-39 314.8 23.9 260 666-968 6-271 (279)
137 cd05085 PTKc_Fer Catalytic dom 100.0 1.2E-34 2.7E-39 309.9 22.9 248 673-963 1-249 (250)
138 cd05592 STKc_nPKC_theta_delta 100.0 3E-35 6.6E-40 325.4 18.8 242 673-960 1-247 (316)
139 cd05588 STKc_aPKC Catalytic do 100.0 6.6E-35 1.4E-39 324.7 21.6 252 673-961 1-262 (329)
140 cd05591 STKc_nPKC_epsilon Cata 100.0 2.9E-35 6.3E-40 326.7 18.6 243 673-961 1-254 (321)
141 cd05075 PTKc_Axl Catalytic dom 100.0 1.4E-34 3E-39 313.8 23.4 258 669-965 1-271 (272)
142 cd05618 STKc_aPKC_iota Catalyt 100.0 6.6E-35 1.4E-39 324.5 21.3 252 673-961 1-262 (329)
143 cd05095 PTKc_DDR2 Catalytic do 100.0 6.3E-35 1.4E-39 320.5 20.8 264 667-963 5-295 (296)
144 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.2E-35 1.3E-39 314.5 20.2 255 667-965 6-261 (261)
145 cd05601 STKc_CRIK Catalytic do 100.0 1.2E-35 2.6E-40 331.5 15.0 254 667-961 1-263 (330)
146 cd05089 PTKc_Tie1 Catalytic do 100.0 8.8E-35 1.9E-39 319.4 21.7 261 667-969 2-279 (297)
147 cd05587 STKc_cPKC Catalytic do 100.0 2.8E-35 6.1E-40 327.2 17.9 248 668-961 1-257 (324)
148 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-34 2.4E-39 320.1 22.4 272 667-964 1-290 (308)
149 cd05621 STKc_ROCK2 Catalytic d 100.0 2.3E-35 5E-40 332.6 17.2 256 665-962 41-305 (370)
150 cd05036 PTKc_ALK_LTK Catalytic 100.0 7.7E-35 1.7E-39 316.6 20.5 259 666-963 5-276 (277)
151 cd05032 PTKc_InsR_like Catalyt 100.0 6E-35 1.3E-39 317.6 19.6 258 667-963 6-276 (277)
152 cd05605 STKc_GRK4_like Catalyt 100.0 5.3E-35 1.1E-39 319.0 19.0 253 668-961 1-261 (285)
153 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-34 2.8E-39 313.3 21.8 258 667-965 5-267 (268)
154 cd05061 PTKc_InsR Catalytic do 100.0 1.1E-34 2.5E-39 317.1 21.5 261 666-965 5-278 (288)
155 cd05066 PTKc_EphR_A Catalytic 100.0 1.5E-34 3.1E-39 312.6 21.9 258 667-965 4-266 (267)
156 cd05625 STKc_LATS1 Catalytic d 100.0 4.1E-35 8.9E-40 333.7 18.4 264 668-961 2-305 (382)
157 cd05620 STKc_nPKC_delta Cataly 100.0 4.8E-35 1E-39 323.9 18.4 242 673-960 1-247 (316)
158 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.1E-34 2.5E-39 316.6 21.1 272 667-965 4-283 (284)
159 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.7E-34 3.7E-39 319.7 22.7 264 667-969 12-297 (314)
160 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-34 3.5E-39 311.0 21.9 253 667-964 6-259 (260)
161 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.4E-35 1.2E-39 319.0 18.4 269 667-969 5-274 (284)
162 KOG0032 Ca2+/calmodulin-depend 100.0 7.2E-35 1.6E-39 321.4 19.2 254 666-963 34-295 (382)
163 cd05570 STKc_PKC Catalytic dom 100.0 5.7E-35 1.2E-39 323.7 18.6 243 673-961 1-252 (318)
164 cd05035 PTKc_Axl_like Catalyti 100.0 2.9E-34 6.2E-39 311.5 23.5 258 669-965 1-272 (273)
165 cd05598 STKc_LATS Catalytic do 100.0 3E-35 6.6E-40 334.2 16.5 265 667-961 1-301 (376)
166 cd05616 STKc_cPKC_beta Catalyt 100.0 4.7E-35 1E-39 325.4 17.5 248 668-961 1-257 (323)
167 cd05088 PTKc_Tie2 Catalytic do 100.0 1.8E-34 3.9E-39 317.7 22.1 262 667-970 7-285 (303)
168 cd05116 PTKc_Syk Catalytic dom 100.0 2.4E-34 5.1E-39 309.1 22.4 249 674-965 2-255 (257)
169 cd05050 PTKc_Musk Catalytic do 100.0 1.5E-34 3.3E-39 316.3 21.2 260 666-964 4-288 (288)
170 cd05607 STKc_GRK7 Catalytic do 100.0 8.9E-35 1.9E-39 315.8 19.2 248 675-962 1-251 (277)
171 cd05619 STKc_nPKC_theta Cataly 100.0 6.7E-35 1.5E-39 322.5 18.5 242 673-960 1-247 (316)
172 cd05069 PTKc_Yes Catalytic dom 100.0 2.7E-34 5.9E-39 309.2 22.7 253 667-964 6-259 (260)
173 cd05575 STKc_SGK Catalytic dom 100.0 6.1E-35 1.3E-39 324.4 18.2 238 673-956 1-242 (323)
174 KOG4717 Serine/threonine prote 100.0 3.8E-35 8.3E-40 309.2 15.5 250 667-962 18-271 (864)
175 cd05067 PTKc_Lck_Blk Catalytic 100.0 2E-34 4.4E-39 310.2 21.6 253 667-964 6-259 (260)
176 KOG0610 Putative serine/threon 100.0 6.5E-35 1.4E-39 303.0 16.7 264 669-961 79-392 (459)
177 cd05582 STKc_RSK_N N-terminal 100.0 2.2E-35 4.7E-40 327.4 14.1 239 673-957 2-245 (318)
178 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.4E-34 5.1E-39 311.3 21.8 256 673-963 1-268 (269)
179 cd06646 STKc_MAP4K5 Catalytic 100.0 1.2E-34 2.6E-39 313.4 19.4 254 667-962 9-266 (267)
180 cd05039 PTKc_Csk_like Catalyti 100.0 2.6E-34 5.6E-39 308.6 21.7 250 667-965 6-256 (256)
181 cd08529 STKc_FA2-like Catalyti 100.0 1.8E-34 3.9E-39 309.8 20.5 251 668-961 1-253 (256)
182 KOG0444 Cytoskeletal regulator 100.0 1.3E-37 2.8E-42 334.4 -4.1 362 78-463 8-373 (1255)
183 PHA03211 serine/threonine kina 100.0 2E-34 4.3E-39 330.0 21.8 271 666-961 168-455 (461)
184 cd07853 STKc_NLK Catalytic dom 100.0 1.5E-34 3.2E-39 327.9 20.6 272 668-962 1-289 (372)
185 cd08219 STKc_Nek3 Catalytic do 100.0 1.3E-34 2.7E-39 310.9 18.9 251 668-961 1-252 (255)
186 cd05060 PTKc_Syk_like Catalyti 100.0 3.6E-34 7.8E-39 307.7 22.3 251 673-966 1-256 (257)
187 cd06654 STKc_PAK1 Catalytic do 100.0 2.7E-34 5.7E-39 315.2 21.7 250 667-961 20-270 (296)
188 cd06637 STKc_TNIK Catalytic do 100.0 1.5E-34 3.3E-39 313.5 19.6 254 664-961 3-269 (272)
189 KOG0618 Serine/threonine phosp 100.0 8.2E-38 1.8E-42 352.7 -6.5 466 78-586 22-491 (1081)
190 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.6E-34 7.8E-39 319.9 22.9 263 668-969 13-297 (334)
191 cd05622 STKc_ROCK1 Catalytic d 100.0 8.8E-35 1.9E-39 328.3 18.0 260 661-962 37-305 (371)
192 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.6E-34 3.4E-39 318.1 19.5 273 667-961 6-286 (301)
193 cd05082 PTKc_Csk Catalytic dom 100.0 3.1E-34 6.6E-39 308.0 21.1 249 667-965 6-256 (256)
194 KOG4279 Serine/threonine prote 100.0 2.3E-35 4.9E-40 320.6 12.2 246 674-960 582-831 (1226)
195 cd05065 PTKc_EphR_B Catalytic 100.0 2.9E-34 6.3E-39 310.7 20.9 259 668-965 5-268 (269)
196 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-34 3.2E-39 326.4 19.3 273 665-963 19-317 (359)
197 cd05602 STKc_SGK1 Catalytic do 100.0 1.1E-34 2.3E-39 322.8 17.7 241 673-959 1-245 (325)
198 cd00192 PTKc Catalytic domain 100.0 5E-34 1.1E-38 307.4 22.4 252 673-963 1-262 (262)
199 cd05057 PTKc_EGFR_like Catalyt 100.0 7.8E-34 1.7E-38 309.1 24.1 259 667-968 7-271 (279)
200 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.4E-34 3.1E-39 324.6 18.7 271 664-962 12-299 (343)
201 cd07868 STKc_CDK8 Catalytic do 100.0 3.8E-34 8.1E-39 317.7 21.9 199 672-887 6-219 (317)
202 cd08227 PK_STRAD_alpha Pseudok 100.0 2.5E-34 5.4E-39 320.3 20.4 280 671-962 2-308 (327)
203 cd07863 STKc_CDK4 Catalytic do 100.0 1.3E-34 2.8E-39 316.9 17.7 272 668-961 1-285 (288)
204 cd05047 PTKc_Tie Catalytic dom 100.0 6E-34 1.3E-38 308.3 22.7 252 673-966 1-269 (270)
205 cd05615 STKc_cPKC_alpha Cataly 100.0 1.9E-34 4E-39 320.2 19.0 242 668-955 1-246 (323)
206 cd06625 STKc_MEKK3_like Cataly 100.0 4.6E-34 1E-38 308.0 21.5 254 667-961 2-260 (263)
207 cd05040 PTKc_Ack_like Catalyti 100.0 4.1E-34 8.9E-39 307.3 20.8 251 673-963 1-256 (257)
208 cd05632 STKc_GRK5 Catalytic do 100.0 2.1E-34 4.6E-39 314.2 18.8 252 669-961 2-261 (285)
209 cd05603 STKc_SGK2 Catalytic do 100.0 1.3E-34 2.9E-39 321.5 17.5 238 673-956 1-242 (321)
210 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-34 3.8E-39 321.0 18.4 249 673-961 1-260 (327)
211 cd05092 PTKc_TrkA Catalytic do 100.0 3.9E-34 8.5E-39 311.5 20.7 256 668-963 6-279 (280)
212 cd05034 PTKc_Src_like Catalyti 100.0 5.8E-34 1.2E-38 306.9 21.7 255 666-964 5-260 (261)
213 PTZ00266 NIMA-related protein 100.0 1.4E-34 3.1E-39 344.7 18.5 258 665-961 11-295 (1021)
214 cd05110 PTKc_HER4 Catalytic do 100.0 7.7E-34 1.7E-38 312.8 23.1 259 667-968 7-271 (303)
215 cd05042 PTKc_Aatyk Catalytic d 100.0 5.5E-34 1.2E-38 308.5 21.5 256 673-963 1-268 (269)
216 KOG0667 Dual-specificity tyros 100.0 7.5E-35 1.6E-39 321.9 14.8 193 668-884 187-388 (586)
217 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-34 2.3E-39 327.5 16.4 265 667-961 1-293 (360)
218 cd06609 STKc_MST3_like Catalyt 100.0 4.1E-34 8.9E-39 310.4 20.1 251 667-962 1-252 (274)
219 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.3E-34 9.3E-39 312.1 20.4 272 668-965 5-283 (284)
220 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.4E-34 1.8E-38 305.4 22.2 239 673-962 1-261 (262)
221 cd05604 STKc_SGK3 Catalytic do 100.0 1.4E-34 3E-39 321.9 16.6 239 673-957 1-243 (325)
222 cd05597 STKc_DMPK_like Catalyt 100.0 2E-34 4.3E-39 321.2 17.9 256 667-961 1-266 (331)
223 cd05073 PTKc_Hck Catalytic dom 100.0 7E-34 1.5E-38 306.0 21.5 254 666-964 5-259 (260)
224 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.2E-34 9.1E-39 310.8 19.8 260 669-975 6-266 (277)
225 cd07874 STKc_JNK3 Catalytic do 100.0 3.3E-34 7.2E-39 323.1 19.4 272 665-961 15-311 (355)
226 cd05041 PTKc_Fes_like Catalyti 100.0 1E-33 2.2E-38 303.1 22.2 249 673-963 1-250 (251)
227 cd06631 STKc_YSK4 Catalytic do 100.0 6.9E-34 1.5E-38 307.1 21.0 257 668-961 1-262 (265)
228 cd05086 PTKc_Aatyk2 Catalytic 100.0 1E-33 2.2E-38 306.1 22.2 255 674-963 2-267 (268)
229 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-33 2.4E-38 306.4 22.5 258 667-968 6-268 (270)
230 cd06612 STKc_MST1_2 Catalytic 100.0 5E-34 1.1E-38 306.4 19.7 250 667-961 3-253 (256)
231 cd05058 PTKc_Met_Ron Catalytic 100.0 1.8E-33 3.9E-38 303.2 23.9 254 673-966 1-260 (262)
232 cd06613 STKc_MAP4K3_like Catal 100.0 8.2E-34 1.8E-38 305.9 21.2 254 667-961 3-260 (262)
233 cd05630 STKc_GRK6 Catalytic do 100.0 4E-34 8.6E-39 312.0 18.9 252 669-961 2-261 (285)
234 KOG0596 Dual specificity; seri 100.0 1.3E-34 2.8E-39 309.7 14.2 254 667-961 361-627 (677)
235 cd07861 STKc_CDK1_euk Catalyti 100.0 5E-34 1.1E-38 311.7 19.3 274 668-961 1-282 (285)
236 PHA03207 serine/threonine kina 100.0 6.2E-34 1.3E-38 324.4 20.8 273 666-963 91-377 (392)
237 cd05112 PTKc_Itk Catalytic dom 100.0 1.6E-33 3.5E-38 302.5 22.7 251 667-962 4-255 (256)
238 KOG4645 MAPKKK (MAP kinase kin 100.0 9.4E-36 2E-40 346.5 5.6 257 665-961 1233-1494(1509)
239 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1E-33 2.2E-38 309.5 21.3 256 668-963 2-264 (286)
240 cd07875 STKc_JNK1 Catalytic do 100.0 6.3E-34 1.4E-38 321.9 20.2 273 665-962 22-319 (364)
241 PTZ00284 protein kinase; Provi 100.0 4.6E-34 1E-38 333.1 19.7 274 662-963 124-440 (467)
242 cd05624 STKc_MRCK_beta Catalyt 100.0 1.9E-34 4.2E-39 321.2 15.7 256 667-961 1-266 (331)
243 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.1E-34 1.8E-38 307.6 20.1 239 674-963 2-274 (274)
244 cd06624 STKc_ASK Catalytic dom 100.0 6.7E-34 1.5E-38 307.7 19.5 258 663-961 4-265 (268)
245 cd06638 STKc_myosinIIIA Cataly 100.0 3.9E-34 8.5E-39 312.7 17.8 265 657-962 8-284 (286)
246 cd05623 STKc_MRCK_alpha Cataly 100.0 2.5E-34 5.5E-39 320.6 16.5 256 667-961 1-266 (332)
247 cd07870 STKc_PFTAIRE2 Catalyti 100.0 8.7E-34 1.9E-38 310.8 20.4 277 665-961 3-288 (291)
248 cd06655 STKc_PAK2 Catalytic do 100.0 7.4E-34 1.6E-38 311.5 19.6 250 667-961 19-269 (296)
249 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 9.2E-34 2E-38 309.8 20.2 263 667-963 1-268 (287)
250 cd06640 STKc_MST4 Catalytic do 100.0 1.3E-33 2.8E-38 306.9 21.2 250 668-963 5-255 (277)
251 cd08221 STKc_Nek9 Catalytic do 100.0 1.1E-33 2.4E-38 303.8 20.4 252 668-962 1-254 (256)
252 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.3E-33 2.9E-38 305.2 21.0 262 667-961 1-264 (267)
253 PHA03209 serine/threonine kina 100.0 8E-34 1.7E-38 319.4 20.0 270 664-961 63-351 (357)
254 cd05044 PTKc_c-ros Catalytic d 100.0 1E-33 2.3E-38 306.4 20.1 252 673-963 1-268 (269)
255 cd06656 STKc_PAK3 Catalytic do 100.0 6.5E-34 1.4E-38 312.3 18.6 250 667-961 19-269 (297)
256 cd05046 PTK_CCK4 Pseudokinase 100.0 1E-33 2.2E-38 307.5 19.9 258 667-963 5-274 (275)
257 cd06645 STKc_MAP4K3 Catalytic 100.0 5E-34 1.1E-38 308.5 17.2 253 667-961 9-265 (267)
258 cd07839 STKc_CDK5 Catalytic do 100.0 7.4E-34 1.6E-38 310.2 18.7 272 668-961 1-281 (284)
259 cd08223 STKc_Nek4 Catalytic do 100.0 1.3E-33 2.8E-38 303.4 20.3 251 668-961 1-254 (257)
260 cd06643 STKc_SLK Catalytic dom 100.0 1.3E-33 2.7E-38 308.0 20.3 252 669-963 7-264 (282)
261 PF00069 Pkinase: Protein kina 100.0 1.5E-34 3.2E-39 311.3 12.7 254 669-961 1-257 (260)
262 cd06639 STKc_myosinIIIB Cataly 100.0 8E-34 1.7E-38 311.0 18.7 263 658-961 13-287 (291)
263 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.7E-33 3.8E-38 305.2 20.9 256 668-961 2-269 (272)
264 cd06605 PKc_MAPKK Catalytic do 100.0 8.8E-34 1.9E-38 306.2 18.2 254 668-961 2-257 (265)
265 cd07867 STKc_CDC2L6 Catalytic 100.0 1E-33 2.3E-38 314.3 19.2 198 672-886 6-218 (317)
266 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.1E-33 2.3E-38 308.8 19.0 256 667-962 1-262 (283)
267 cd08218 STKc_Nek1 Catalytic do 100.0 1.6E-33 3.4E-38 302.6 19.7 251 668-961 1-253 (256)
268 cd06651 STKc_MEKK3 Catalytic d 100.0 3E-33 6.6E-38 302.1 22.0 253 667-961 2-261 (266)
269 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-33 3.6E-38 301.9 19.9 247 667-964 6-253 (254)
270 cd06644 STKc_STK10_LOK Catalyt 100.0 2.5E-33 5.4E-38 307.2 21.6 252 667-961 12-269 (292)
271 KOG1025 Epidermal growth facto 100.0 2.5E-34 5.4E-39 318.9 13.5 254 671-967 700-959 (1177)
272 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.7E-33 5.8E-38 302.8 21.3 255 668-961 1-264 (267)
273 KOG4257 Focal adhesion tyrosin 100.0 4.7E-34 1E-38 307.6 14.8 254 670-967 392-651 (974)
274 cd06611 STKc_SLK_like Catalyti 100.0 9.9E-34 2.1E-38 308.5 17.6 253 667-962 5-263 (280)
275 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.7E-33 5.8E-38 306.1 21.1 273 667-961 1-283 (286)
276 cd05574 STKc_phototropin_like 100.0 2.8E-33 6E-38 310.6 21.3 266 667-961 1-289 (316)
277 KOG4278 Protein tyrosine kinas 100.0 5.8E-34 1.2E-38 306.0 15.0 255 670-968 270-526 (1157)
278 cd05586 STKc_Sck1_like Catalyt 100.0 3.4E-34 7.3E-39 319.6 13.9 242 675-961 1-253 (330)
279 cd08528 STKc_Nek10 Catalytic d 100.0 4.6E-33 1E-37 301.3 22.4 256 668-963 1-268 (269)
280 cd07844 STKc_PCTAIRE_like Cata 100.0 2.4E-33 5.3E-38 307.3 20.4 274 667-961 5-288 (291)
281 KOG0607 MAP kinase-interacting 100.0 4.5E-34 9.7E-39 285.4 13.1 277 659-961 75-361 (463)
282 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.4E-33 3E-38 307.7 17.7 260 658-961 7-279 (282)
283 KOG4250 TANK binding protein k 100.0 3.9E-34 8.5E-39 316.3 13.3 280 668-966 14-311 (732)
284 cd08217 STKc_Nek2 Catalytic do 100.0 4E-33 8.8E-38 300.9 21.0 256 668-961 1-262 (265)
285 cd06641 STKc_MST3 Catalytic do 100.0 4.4E-33 9.5E-38 302.8 21.3 247 669-961 6-253 (277)
286 cd06658 STKc_PAK5 Catalytic do 100.0 2.1E-33 4.5E-38 307.4 18.5 245 672-961 27-272 (292)
287 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.7E-33 3.6E-38 302.6 17.3 239 673-962 1-257 (258)
288 cd06917 STKc_NAK1_like Catalyt 100.0 5.2E-33 1.1E-37 302.3 21.1 250 668-962 2-256 (277)
289 cd05074 PTKc_Tyro3 Catalytic d 100.0 7.3E-33 1.6E-37 300.5 22.1 258 669-965 1-272 (273)
290 KOG0579 Ste20-like serine/thre 100.0 1.2E-34 2.6E-39 311.7 7.8 249 669-961 34-289 (1187)
291 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.2E-33 9.2E-38 299.8 19.9 237 673-962 1-258 (259)
292 cd06630 STKc_MEKK1 Catalytic d 100.0 6.8E-33 1.5E-37 299.8 21.5 257 668-961 1-264 (268)
293 cd06608 STKc_myosinIII_like Ca 100.0 3.8E-33 8.2E-38 303.0 19.5 256 665-961 4-272 (275)
294 smart00219 TyrKc Tyrosine kina 100.0 8.7E-33 1.9E-37 297.1 21.9 252 669-962 1-258 (258)
295 cd07860 STKc_CDK2_3 Catalytic 100.0 3.3E-33 7.1E-38 305.1 18.8 274 668-961 1-281 (284)
296 cd07849 STKc_ERK1_2_like Catal 100.0 2.9E-33 6.2E-38 313.0 18.7 280 666-966 4-299 (336)
297 cd06616 PKc_MKK4 Catalytic dom 100.0 2.8E-33 6E-38 306.3 17.9 256 669-961 6-267 (288)
298 cd08220 STKc_Nek8 Catalytic do 100.0 7E-33 1.5E-37 297.5 20.7 250 668-961 1-253 (256)
299 cd06652 STKc_MEKK2 Catalytic d 100.0 9.9E-33 2.1E-37 298.0 21.6 253 667-961 2-261 (265)
300 KOG1035 eIF-2alpha kinase GCN2 100.0 9.5E-34 2E-38 328.6 14.3 265 666-960 478-870 (1351)
301 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-32 2.8E-37 296.9 22.4 256 668-961 1-261 (264)
302 cd06659 STKc_PAK6 Catalytic do 100.0 5.3E-33 1.2E-37 304.9 19.6 247 672-963 26-273 (297)
303 cd07832 STKc_CCRK Catalytic do 100.0 8.7E-33 1.9E-37 302.1 21.0 272 668-961 1-282 (286)
304 cd06647 STKc_PAK_I Catalytic d 100.0 6.6E-33 1.4E-37 303.7 20.0 251 667-962 19-270 (293)
305 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.6E-33 7.8E-38 305.1 17.9 274 667-961 1-283 (286)
306 cd06632 STKc_MEKK1_plant Catal 100.0 7E-33 1.5E-37 297.9 19.6 249 668-961 1-255 (258)
307 cd07842 STKc_CDK8_like Catalyt 100.0 8.8E-33 1.9E-37 306.8 20.2 280 668-961 1-313 (316)
308 cd07837 STKc_CdkB_plant Cataly 100.0 5.7E-33 1.2E-37 305.0 18.3 274 667-961 1-291 (295)
309 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-32 4.6E-37 295.2 22.3 253 667-961 1-256 (264)
310 cd05580 STKc_PKA Catalytic dom 100.0 8.2E-33 1.8E-37 302.7 19.1 246 667-961 1-254 (290)
311 cd07841 STKc_CDK7 Catalytic do 100.0 1.5E-32 3.2E-37 302.2 21.1 272 668-961 1-282 (298)
312 cd06607 STKc_TAO Catalytic dom 100.0 1.8E-32 3.9E-37 302.6 21.6 250 667-964 15-270 (307)
313 cd07836 STKc_Pho85 Catalytic d 100.0 1.7E-32 3.6E-37 299.5 21.1 273 668-961 1-281 (284)
314 cd08225 STKc_Nek5 Catalytic do 100.0 6.7E-33 1.4E-37 297.9 16.8 251 668-961 1-254 (257)
315 KOG0666 Cyclin C-dependent kin 100.0 1.1E-33 2.4E-38 281.8 9.6 284 667-965 24-341 (438)
316 KOG0586 Serine/threonine prote 100.0 3.1E-33 6.8E-38 305.4 14.1 252 665-963 54-308 (596)
317 cd06648 STKc_PAK_II Catalytic 100.0 2.8E-32 6.2E-37 297.5 21.7 248 669-961 21-269 (285)
318 cd05609 STKc_MAST Catalytic do 100.0 1.7E-32 3.6E-37 302.5 19.7 266 667-962 1-271 (305)
319 cd06614 STKc_PAK Catalytic dom 100.0 2.8E-32 6.2E-37 297.9 21.3 254 665-962 17-271 (286)
320 KOG0690 Serine/threonine prote 100.0 3.2E-33 7E-38 279.5 12.5 250 666-961 167-424 (516)
321 KOG0983 Mitogen-activated prot 100.0 3.6E-33 7.8E-38 273.4 12.5 248 672-961 97-349 (391)
322 cd06635 STKc_TAO1 Catalytic do 100.0 3.1E-32 6.8E-37 301.9 21.7 254 669-970 27-286 (317)
323 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-32 2.5E-37 301.5 17.5 273 667-961 1-285 (288)
324 cd07835 STKc_CDK1_like Catalyt 100.0 1.5E-32 3.2E-37 299.8 18.2 272 669-961 1-280 (283)
325 cd08530 STKc_CNK2-like Catalyt 100.0 2.2E-32 4.7E-37 293.6 19.1 251 668-961 1-253 (256)
326 PHA03210 serine/threonine kina 100.0 8E-33 1.7E-37 323.5 16.9 279 665-961 146-454 (501)
327 cd08226 PK_STRAD_beta Pseudoki 100.0 2.6E-32 5.7E-37 304.1 20.2 279 673-963 4-310 (328)
328 cd05633 STKc_GRK3 Catalytic do 100.0 2.7E-32 5.9E-37 296.5 19.6 243 674-961 1-255 (279)
329 cd07831 STKc_MOK Catalytic dom 100.0 3.7E-32 7.9E-37 296.5 20.7 268 669-961 1-279 (282)
330 cd07843 STKc_CDC2L1 Catalytic 100.0 2.9E-32 6.3E-37 299.0 20.0 273 667-961 5-290 (293)
331 KOG1006 Mitogen-activated prot 100.0 2.6E-34 5.6E-39 280.6 3.1 264 654-961 58-327 (361)
332 KOG0199 ACK and related non-re 100.0 7.3E-33 1.6E-37 302.2 14.7 250 672-962 115-369 (1039)
333 PHA02882 putative serine/threo 100.0 2.1E-32 4.6E-37 299.7 18.3 264 667-962 12-293 (294)
334 cd07850 STKc_JNK Catalytic dom 100.0 4.5E-32 9.8E-37 305.4 21.4 272 665-962 14-312 (353)
335 cd07879 STKc_p38delta_MAPK13 C 100.0 2.2E-32 4.8E-37 306.3 18.6 274 666-968 14-306 (342)
336 cd07865 STKc_CDK9 Catalytic do 100.0 4.8E-32 1E-36 299.9 21.1 277 667-961 12-307 (310)
337 KOG0669 Cyclin T-dependent kin 100.0 3.3E-34 7.1E-39 277.3 2.7 278 668-963 18-317 (376)
338 PHA03390 pk1 serine/threonine- 100.0 5.5E-32 1.2E-36 292.1 20.3 250 660-961 7-262 (267)
339 cd07845 STKc_CDK10 Catalytic d 100.0 4.7E-32 1E-36 299.7 20.0 276 666-963 6-292 (309)
340 cd08216 PK_STRAD Pseudokinase 100.0 3.5E-32 7.6E-37 301.5 18.5 279 672-963 7-297 (314)
341 cd08215 STKc_Nek Catalytic dom 100.0 1.4E-31 3E-36 287.6 22.5 253 668-961 1-255 (258)
342 cd07855 STKc_ERK5 Catalytic do 100.0 4E-32 8.7E-37 303.4 18.9 279 666-963 4-296 (334)
343 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.6E-32 7.8E-37 304.1 18.4 279 666-968 4-300 (337)
344 cd06618 PKc_MKK7 Catalytic dom 100.0 7.2E-32 1.6E-36 296.2 20.2 255 667-963 15-275 (296)
345 PLN00009 cyclin-dependent kina 100.0 4.4E-32 9.5E-37 297.7 18.4 274 667-961 2-284 (294)
346 cd05578 STKc_Yank1 Catalytic d 100.0 2.8E-32 6E-37 293.2 16.4 249 668-960 1-254 (258)
347 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.4E-32 9.6E-37 304.1 18.6 277 659-962 9-301 (345)
348 cd06606 STKc_MAPKKK Catalytic 100.0 9E-32 2E-36 289.2 20.1 253 668-961 1-257 (260)
349 cd07852 STKc_MAPK15 Catalytic 100.0 6E-32 1.3E-36 302.5 19.4 282 665-966 5-302 (337)
350 cd05122 PKc_STE Catalytic doma 100.0 1.2E-31 2.6E-36 287.0 20.6 250 668-961 1-251 (253)
351 cd05577 STKc_GRK Catalytic dom 100.0 9.3E-32 2E-36 292.3 20.1 246 675-961 1-254 (277)
352 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.1E-31 2.5E-36 289.5 20.6 253 667-961 2-261 (264)
353 cd06657 STKc_PAK4 Catalytic do 100.0 9.6E-32 2.1E-36 294.1 20.1 244 673-961 26-270 (292)
354 cd05572 STKc_cGK_PKG Catalytic 100.0 1.1E-31 2.3E-36 289.4 20.2 244 675-961 1-252 (262)
355 KOG0986 G protein-coupled rece 100.0 1.3E-32 2.8E-37 287.5 12.3 247 667-954 185-434 (591)
356 cd07840 STKc_CDK9_like Catalyt 100.0 1.6E-31 3.4E-36 292.3 21.2 273 669-961 1-284 (287)
357 cd07838 STKc_CDK4_6_like Catal 100.0 1.1E-31 2.3E-36 293.7 19.6 272 669-961 1-284 (287)
358 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.8E-32 1.5E-36 300.2 18.3 273 661-961 4-288 (328)
359 cd07830 STKc_MAK_like Catalyti 100.0 1.5E-31 3.3E-36 291.8 20.2 271 669-961 1-280 (283)
360 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.7E-32 1E-36 303.7 16.5 270 665-961 13-298 (343)
361 cd06634 STKc_TAO2 Catalytic do 100.0 1.6E-31 3.4E-36 295.0 19.5 250 669-966 17-272 (308)
362 cd08222 STKc_Nek11 Catalytic d 100.0 9.7E-32 2.1E-36 289.4 17.4 252 668-961 1-257 (260)
363 cd07834 STKc_MAPK Catalytic do 100.0 1.7E-31 3.6E-36 298.3 19.9 280 668-968 1-298 (330)
364 cd05118 STKc_CMGC Catalytic do 100.0 1.1E-31 2.4E-36 292.9 17.8 271 669-961 1-280 (283)
365 cd05606 STKc_beta_ARK Catalyti 100.0 2.3E-31 5.1E-36 289.1 20.3 243 674-961 1-255 (278)
366 KOG0587 Traf2- and Nck-interac 100.0 5.2E-32 1.1E-36 304.8 15.4 260 659-961 11-282 (953)
367 cd05611 STKc_Rim15_like Cataly 100.0 2.1E-31 4.5E-36 286.8 19.6 242 673-960 2-247 (260)
368 cd07866 STKc_BUR1 Catalytic do 100.0 1E-31 2.2E-36 297.5 17.6 285 666-961 7-308 (311)
369 cd06627 STKc_Cdc7_like Catalyt 100.0 3.7E-31 8.1E-36 283.6 20.9 249 668-961 1-251 (254)
370 cd07864 STKc_CDK12 Catalytic d 100.0 1.7E-31 3.7E-36 294.4 18.6 277 665-961 5-299 (302)
371 cd06633 STKc_TAO3 Catalytic do 100.0 3.8E-31 8.3E-36 292.6 21.4 245 669-961 23-273 (313)
372 KOG4236 Serine/threonine prote 100.0 8.6E-33 1.9E-37 292.2 7.4 246 672-961 569-819 (888)
373 PTZ00024 cyclin-dependent prot 100.0 4.7E-31 1E-35 295.2 21.9 287 667-963 8-315 (335)
374 KOG1151 Tousled-like protein k 100.0 9.6E-33 2.1E-37 286.2 7.5 264 666-960 462-740 (775)
375 KOG0604 MAP kinase-activated p 100.0 3.4E-32 7.3E-37 270.2 10.7 255 666-963 60-324 (400)
376 cd05579 STKc_MAST_like Catalyt 100.0 2.2E-31 4.7E-36 287.4 17.8 252 675-962 1-255 (265)
377 cd05613 STKc_MSK1_N N-terminal 100.0 4.6E-31 9.9E-36 289.0 20.5 253 668-961 1-268 (290)
378 cd07857 STKc_MPK1 Catalytic do 100.0 3.7E-31 8E-36 295.4 20.0 274 668-961 1-292 (332)
379 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.1E-31 4.5E-36 298.4 17.5 272 666-961 4-300 (342)
380 cd07829 STKc_CDK_like Catalyti 100.0 4.4E-31 9.4E-36 288.0 19.1 271 669-961 1-279 (282)
381 cd07851 STKc_p38 Catalytic dom 100.0 1.5E-31 3.1E-36 299.8 15.6 270 664-961 12-298 (343)
382 cd05583 STKc_MSK_N N-terminal 100.0 4.2E-31 9E-36 289.0 18.6 256 668-964 1-266 (288)
383 KOG0671 LAMMER dual specificit 100.0 5.7E-32 1.2E-36 278.5 10.7 270 666-961 88-406 (415)
384 KOG0612 Rho-associated, coiled 100.0 2.8E-32 6E-37 313.8 8.9 260 661-962 69-339 (1317)
385 cd05581 STKc_PDK1 Catalytic do 100.0 5.5E-31 1.2E-35 286.9 17.4 262 667-961 1-277 (280)
386 KOG0662 Cyclin-dependent kinas 100.0 2.3E-31 5.1E-36 244.6 12.0 267 668-961 3-283 (292)
387 cd05610 STKc_MASTL Catalytic d 100.0 1.3E-30 2.8E-35 314.2 20.3 147 667-820 4-153 (669)
388 cd05123 STKc_AGC Catalytic dom 100.0 2.8E-30 6.2E-35 276.2 18.9 240 675-960 1-246 (250)
389 KOG1024 Receptor-like protein 100.0 1.1E-30 2.5E-35 267.7 13.0 270 659-967 276-557 (563)
390 KOG0200 Fibroblast/platelet-de 100.0 5.8E-30 1.2E-34 303.5 20.6 258 670-966 299-580 (609)
391 KOG0984 Mitogen-activated prot 100.0 4.6E-31 1E-35 248.7 7.8 201 672-889 51-257 (282)
392 KOG0668 Casein kinase II, alph 100.0 1.2E-30 2.5E-35 249.4 10.0 265 666-961 37-322 (338)
393 cd05576 STKc_RPK118_like Catal 100.0 4.1E-30 8.9E-35 272.3 15.2 220 678-956 4-224 (237)
394 KOG0603 Ribosomal protein S6 k 100.0 2.5E-30 5.5E-35 284.3 13.4 243 666-964 321-566 (612)
395 KOG0696 Serine/threonine prote 100.0 1E-30 2.2E-35 269.2 8.9 241 667-953 349-593 (683)
396 KOG1027 Serine/threonine prote 100.0 2.7E-30 5.9E-35 289.8 8.0 248 669-960 511-766 (903)
397 PLN03224 probable serine/threo 100.0 4.2E-29 9.1E-34 284.9 17.5 270 665-962 143-501 (507)
398 KOG0695 Serine/threonine prote 100.0 2.3E-29 5E-34 252.6 12.2 247 667-953 250-502 (593)
399 PLN03225 Serine/threonine-prot 100.0 6.1E-29 1.3E-33 291.8 17.0 270 665-961 130-450 (566)
400 KOG0614 cGMP-dependent protein 100.0 8.7E-30 1.9E-34 269.1 8.6 248 671-963 424-679 (732)
401 smart00220 S_TKc Serine/Threon 100.0 1.9E-28 4.1E-33 260.4 17.4 239 679-960 1-240 (244)
402 KOG0664 Nemo-like MAPK-related 100.0 1E-29 2.2E-34 248.7 5.5 271 670-962 56-344 (449)
403 KOG0608 Warts/lats-like serine 100.0 1.3E-28 2.9E-33 265.9 13.0 215 668-889 630-876 (1034)
404 KOG1167 Serine/threonine prote 100.0 1.5E-28 3.3E-33 257.2 9.5 287 662-961 31-381 (418)
405 KOG0665 Jun-N-terminal kinase 99.9 1.1E-27 2.4E-32 241.3 10.3 266 666-961 16-310 (369)
406 KOG1152 Signal transduction se 99.9 8.7E-28 1.9E-32 258.1 8.9 197 667-885 561-770 (772)
407 KOG1290 Serine/threonine prote 99.9 3.6E-26 7.8E-31 241.8 16.5 132 666-804 77-221 (590)
408 cd00180 PKc Catalytic domain o 99.9 1.1E-25 2.4E-30 233.3 19.4 212 675-962 1-215 (215)
409 KOG0670 U4/U6-associated splic 99.9 1.1E-26 2.4E-31 246.3 9.3 207 656-886 423-637 (752)
410 KOG0576 Mitogen-activated prot 99.9 6E-27 1.3E-31 256.0 7.4 252 667-960 15-270 (829)
411 smart00221 STYKc Protein kinas 99.9 5.2E-25 1.1E-29 231.1 17.6 200 669-886 1-202 (225)
412 KOG4237 Extracellular matrix p 99.9 1.8E-27 3.9E-32 245.3 -1.2 405 102-558 68-498 (498)
413 KOG1345 Serine/threonine kinas 99.9 9.8E-26 2.1E-30 221.3 8.8 252 667-962 24-285 (378)
414 PLN03210 Resistant to P. syrin 99.9 9.9E-24 2.1E-28 268.9 23.2 363 77-511 532-904 (1153)
415 PLN03210 Resistant to P. syrin 99.9 1.9E-23 4.1E-28 266.3 23.1 341 193-559 550-904 (1153)
416 smart00750 KIND kinase non-cat 99.9 1E-23 2.2E-28 212.2 13.9 170 749-968 1-172 (176)
417 PRK15387 E3 ubiquitin-protein 99.9 1.6E-23 3.4E-28 246.9 16.8 264 126-447 202-465 (788)
418 PLN00181 protein SPA1-RELATED; 99.9 3.4E-24 7.4E-29 265.5 10.6 209 720-962 28-266 (793)
419 PRK15387 E3 ubiquitin-protein 99.9 1.9E-23 4.2E-28 246.1 14.7 268 101-426 201-468 (788)
420 KOG1163 Casein kinase (serine/ 99.9 2.9E-23 6.4E-28 200.6 11.3 273 665-971 13-290 (341)
421 KOG1165 Casein kinase (serine/ 99.9 2.6E-22 5.5E-27 203.0 18.1 269 667-969 28-303 (449)
422 PRK15370 E3 ubiquitin-protein 99.9 1.4E-22 3.1E-27 240.9 16.3 318 25-416 54-428 (754)
423 KOG4237 Extracellular matrix p 99.9 2.8E-24 6.1E-29 221.9 -0.1 420 69-534 50-498 (498)
424 PRK09188 serine/threonine prot 99.9 2.3E-22 5E-27 220.1 13.3 176 662-859 13-195 (365)
425 KOG1164 Casein kinase (serine/ 99.9 2.6E-21 5.7E-26 213.6 20.3 269 668-969 19-301 (322)
426 PRK15370 E3 ubiquitin-protein 99.8 3E-21 6.6E-26 229.5 12.3 247 149-440 178-428 (754)
427 KOG0195 Integrin-linked kinase 99.8 4.5E-22 9.7E-27 195.2 4.2 248 672-966 195-447 (448)
428 KOG0590 Checkpoint kinase and 99.8 1E-21 2.2E-26 229.6 5.5 257 671-961 322-585 (601)
429 KOG1240 Protein kinase contain 99.8 2.7E-21 5.9E-26 222.9 8.1 256 668-963 24-293 (1431)
430 COG0515 SPS1 Serine/threonine 99.8 2.4E-19 5.3E-24 200.5 22.2 265 669-961 2-275 (384)
431 cd05147 RIO1_euk RIO kinase fa 99.8 1E-19 2.2E-24 183.5 12.5 141 672-822 2-168 (190)
432 PRK12274 serine/threonine prot 99.8 1.3E-19 2.9E-24 179.3 10.9 198 670-886 5-209 (218)
433 PRK10359 lipopolysaccharide co 99.8 1.7E-19 3.7E-24 183.0 8.4 173 665-879 29-217 (232)
434 KOG0617 Ras suppressor protein 99.8 4.7E-21 1E-25 175.8 -3.3 163 353-546 31-194 (264)
435 cd05145 RIO1_like RIO kinase f 99.8 1.5E-18 3.2E-23 176.0 14.4 141 672-822 2-168 (190)
436 PF14531 Kinase-like: Kinase-l 99.8 6.3E-19 1.4E-23 184.4 8.9 232 671-952 16-288 (288)
437 KOG0617 Ras suppressor protein 99.8 4E-20 8.6E-25 169.7 -1.7 180 401-586 31-214 (264)
438 cd00116 LRR_RI Leucine-rich re 99.8 5.7E-20 1.2E-24 204.2 -2.2 212 81-296 2-235 (319)
439 KOG1023 Natriuretic peptide re 99.7 6E-18 1.3E-22 188.1 12.4 219 718-968 1-227 (484)
440 KOG1166 Mitotic checkpoint ser 99.7 4.8E-18 1E-22 201.5 12.0 197 665-883 696-902 (974)
441 cd00116 LRR_RI Leucine-rich re 99.7 3.3E-20 7.2E-25 206.1 -7.0 208 352-560 78-319 (319)
442 KOG0603 Ribosomal protein S6 k 99.7 2.2E-18 4.8E-23 190.6 4.0 226 674-955 1-232 (612)
443 PRK10345 hypothetical protein; 99.7 7.7E-17 1.7E-21 163.8 13.0 137 670-819 5-157 (210)
444 KOG4158 BRPK/PTEN-induced prot 99.7 3.8E-17 8.3E-22 169.3 9.9 199 722-960 274-509 (598)
445 smart00090 RIO RIO-like kinase 99.7 2.1E-16 4.5E-21 165.0 13.6 144 668-822 29-199 (237)
446 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.4E-17 3.1E-22 180.8 2.0 128 738-879 330-457 (516)
447 PLN03150 hypothetical protein; 99.7 2.4E-16 5.3E-21 187.7 12.6 153 30-189 368-528 (623)
448 PRK14879 serine/threonine prot 99.7 7E-16 1.5E-20 160.1 12.8 135 673-820 2-143 (211)
449 cd05144 RIO2_C RIO kinase fami 99.7 8.3E-16 1.8E-20 157.4 13.1 138 668-822 16-176 (198)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 6E-16 1.3E-20 158.9 12.0 132 674-821 1-139 (199)
451 PRK09605 bifunctional UGMP fam 99.6 1.2E-15 2.6E-20 180.2 11.8 142 663-821 329-477 (535)
452 KOG0606 Microtubule-associated 99.6 4.5E-16 9.7E-21 180.5 4.9 220 666-953 82-304 (1205)
453 cd05120 APH_ChoK_like Aminogly 99.6 1.9E-14 4.1E-19 140.7 12.4 137 671-822 2-140 (155)
454 KOG0532 Leucine-rich repeat (L 99.6 2.7E-16 5.9E-21 170.4 -1.0 179 378-566 74-252 (722)
455 KOG0590 Checkpoint kinase and 99.5 6.8E-16 1.5E-20 180.8 0.1 257 668-961 21-286 (601)
456 cd05119 RIO RIO kinase family, 99.5 3.2E-14 6.9E-19 144.5 12.2 138 672-822 2-165 (187)
457 PLN03150 hypothetical protein; 99.5 1.1E-14 2.3E-19 173.7 8.9 120 477-597 419-540 (623)
458 PRK01723 3-deoxy-D-manno-octul 99.5 1.2E-13 2.5E-18 144.8 12.3 136 672-820 36-191 (239)
459 KOG0532 Leucine-rich repeat (L 99.4 8.4E-15 1.8E-19 159.0 -2.2 174 330-537 74-247 (722)
460 COG4886 Leucine-rich repeat (L 99.4 8.7E-13 1.9E-17 150.8 8.0 179 379-566 116-295 (394)
461 TIGR01982 UbiB 2-polyprenylphe 99.4 2.7E-12 5.7E-17 146.4 11.2 143 672-823 122-309 (437)
462 COG4886 Leucine-rich repeat (L 99.3 8.7E-13 1.9E-17 150.8 5.9 63 472-537 228-290 (394)
463 KOG1266 Protein kinase [Signal 99.3 3.4E-12 7.3E-17 130.1 6.1 208 718-963 121-333 (458)
464 cd05151 ChoK Choline Kinase (C 99.3 3.2E-11 6.9E-16 120.4 11.2 131 672-820 3-136 (170)
465 PRK04750 ubiB putative ubiquin 99.2 1.8E-11 3.8E-16 140.8 8.1 146 668-824 121-317 (537)
466 KOG1259 Nischarin, modulator o 99.2 3.1E-12 6.7E-17 128.4 0.6 133 426-565 283-416 (490)
467 KOG0601 Cyclin-dependent kinas 99.2 1.6E-11 3.4E-16 137.1 6.3 252 668-960 115-378 (524)
468 KOG3207 Beta-tubulin folding c 99.2 6.1E-12 1.3E-16 133.2 0.8 164 122-295 118-284 (505)
469 KOG3207 Beta-tubulin folding c 99.1 1.5E-11 3.2E-16 130.3 2.0 163 199-368 119-284 (505)
470 PF14580 LRR_9: Leucine-rich r 99.1 3.7E-11 8E-16 117.3 4.3 126 99-257 17-147 (175)
471 cd05146 RIO3_euk RIO kinase fa 99.1 9.6E-10 2.1E-14 109.7 14.4 138 672-822 2-175 (197)
472 KOG1259 Nischarin, modulator o 99.1 1.7E-11 3.7E-16 123.2 1.6 208 323-540 206-415 (490)
473 KOG1909 Ran GTPase-activating 99.1 2.9E-12 6.2E-17 132.3 -4.2 247 200-464 29-310 (382)
474 cd05154 ACAD10_11_like Acyl-Co 99.1 9.7E-10 2.1E-14 115.0 14.4 144 672-820 3-206 (223)
475 KOG0531 Protein phosphatase 1, 99.1 1.9E-11 4.1E-16 139.9 0.8 219 328-561 69-290 (414)
476 KOG1243 Protein kinase [Genera 99.1 7.4E-10 1.6E-14 124.7 12.1 167 688-881 34-200 (690)
477 PF14580 LRR_9: Leucine-rich r 99.1 1E-10 2.2E-15 114.3 4.5 132 121-290 15-148 (175)
478 KOG1909 Ran GTPase-activating 99.1 7.9E-12 1.7E-16 129.1 -3.8 145 225-415 157-310 (382)
479 KOG0601 Cyclin-dependent kinas 99.0 9.8E-11 2.1E-15 130.8 4.0 252 664-967 262-520 (524)
480 KOG0531 Protein phosphatase 1, 99.0 4.7E-11 1E-15 136.6 1.0 245 281-562 71-319 (414)
481 COG3642 Mn2+-dependent serine/ 99.0 2.4E-09 5.1E-14 102.4 11.6 132 673-820 2-140 (204)
482 PF08263 LRRNT_2: Leucine rich 99.0 3.9E-10 8.5E-15 82.6 3.5 41 33-73 2-43 (43)
483 KOG3087 Serine/threonine prote 99.0 4.6E-09 9.9E-14 99.6 11.1 144 671-820 11-165 (229)
484 COG4248 Uncharacterized protei 98.9 3.3E-08 7.2E-13 104.9 17.5 267 671-969 15-304 (637)
485 KOG4658 Apoptotic ATPase [Sign 98.8 3.9E-09 8.4E-14 128.7 6.8 105 102-211 546-652 (889)
486 KOG4658 Apoptotic ATPase [Sign 98.8 4.1E-09 8.9E-14 128.5 6.3 133 97-261 519-653 (889)
487 PRK15123 lipopolysaccharide co 98.8 3.4E-08 7.4E-13 104.5 12.1 142 673-820 28-194 (268)
488 KOG3741 Poly(A) ribonuclease s 98.8 1.1E-07 2.4E-12 103.8 16.1 171 679-883 288-475 (655)
489 PF01163 RIO1: RIO1 family; I 98.8 4.3E-08 9.2E-13 97.6 11.9 126 682-821 1-156 (188)
490 KOG0606 Microtubule-associated 98.8 2.3E-09 5E-14 125.7 2.9 261 666-956 803-1084(1205)
491 PF13855 LRR_8: Leucine rich r 98.7 1.2E-08 2.7E-13 81.8 4.3 60 501-560 2-61 (61)
492 PF13855 LRR_8: Leucine rich r 98.7 8.3E-09 1.8E-13 82.8 2.8 61 101-161 1-61 (61)
493 COG0478 RIO-like serine/threon 98.6 3.1E-07 6.7E-12 93.4 12.1 135 670-820 94-251 (304)
494 KOG1859 Leucine-rich repeat pr 98.5 3.8E-09 8.2E-14 118.5 -4.2 129 126-264 165-293 (1096)
495 KOG1859 Leucine-rich repeat pr 98.5 1.9E-09 4E-14 120.9 -7.7 179 324-513 102-292 (1096)
496 KOG2137 Protein kinase [Signal 98.4 1.2E-07 2.7E-12 107.6 3.0 158 775-960 106-264 (700)
497 PF06293 Kdo: Lipopolysacchari 98.4 1.5E-06 3.3E-11 89.1 10.6 107 708-821 55-171 (206)
498 KOG4579 Leucine-rich repeat (L 98.4 2.1E-08 4.6E-13 89.9 -3.0 109 333-445 29-140 (177)
499 KOG2982 Uncharacterized conser 98.4 6.9E-08 1.5E-12 97.8 -0.3 61 308-368 200-262 (418)
500 KOG2120 SCF ubiquitin ligase, 98.4 1.1E-08 2.4E-13 103.4 -6.2 184 176-389 185-373 (419)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.5e-110 Score=1063.67 Aligned_cols=878 Identities=32% Similarity=0.528 Sum_probs=586.4
Q ss_pred cHHhHHHHHHHHHhccCCCccccCCCCCCCCCCcceeeEEECCCCCeEEEEEcccCCcccccccccccCCCCcEEeCcCC
Q 042568 32 IIRDRASLVTFMSSIISAPEHALESWNSTDVHVCNWSGVKCNNSRNKVVELDLSARSIYGTISPALANLSSLIVLDLSKN 111 (983)
Q Consensus 32 ~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n 111 (983)
.+.|+.||++||+++. +|.+.+.+|+. ..+||.|.||+|++ .++|+.|||+++++.|.+++++..+++|++|+|++|
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~~~w~~-~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYLSNWNS-SADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccCCCCCC-CCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 3479999999999994 78888999975 46799999999986 468999999999999999999999999999999999
Q ss_pred cCCCCCccccC-CCCCCCEEeccCccCCCCch----------------------hhhcccccccEEeccCcccccccCCc
Q 042568 112 FFQGHIPAELG-SLIRLKQLSLSWNSLQGKIP----------------------SQLGSLHQLEYLDLGNNKLVGEIPIP 168 (983)
Q Consensus 112 ~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p----------------------~~~~~L~~L~~L~Ls~N~l~~~~p~~ 168 (983)
+++|.+|..+. .+++|++|+|++|++++.+| ..++++++|++|+|++|.+.+.+|..
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 183 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS 183 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChh
Confidence 99988887654 77777777777776665444 44444444444444444444444443
Q ss_pred ccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceecccccccccccchhhhcC
Q 042568 169 IFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISK 248 (983)
Q Consensus 169 ~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 248 (983)
+. .+++|++|+|++|.+++.+|. .+..+++|++|+|++|++++.+|..++++++|++|+|++|++++.+|.. +..
T Consensus 184 ~~---~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~-l~~ 258 (968)
T PLN00113 184 LT---NLTSLEFLTLASNQLVGQIPR-ELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS-LGN 258 (968)
T ss_pred hh---hCcCCCeeeccCCCCcCcCCh-HHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChh-HhC
Confidence 32 344444444444444444432 2334444555555555544444544555555555555555544444332 344
Q ss_pred CCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCC
Q 042568 249 MPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHIS 328 (983)
Q Consensus 249 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~ 328 (983)
+++|++|+|++|.+.. .++..+.++++|++|++++|++.+.+|..+..+ ++|+.|++++|.+.+.+|..+.
T Consensus 259 l~~L~~L~L~~n~l~~--------~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l-~~L~~L~l~~n~~~~~~~~~~~ 329 (968)
T PLN00113 259 LKNLQYLFLYQNKLSG--------PIPPSIFSLQKLISLDLSDNSLSGEIPELVIQL-QNLEILHLFSNNFTGKIPVALT 329 (968)
T ss_pred CCCCCEEECcCCeeec--------cCchhHhhccCcCEEECcCCeeccCCChhHcCC-CCCcEEECCCCccCCcCChhHh
Confidence 4555555555544432 122334444455555555555554444444444 2455555555555444444444
Q ss_pred CCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCC------------------------CCCCCCcEE
Q 042568 329 NLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAF------------------------GDIPHLGLL 384 (983)
Q Consensus 329 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~------------------------~~l~~L~~L 384 (983)
.+++|+.|++++|.+++.+|..++.+++|+.|++++|.+.+.+|..+ +.+++|+.|
T Consensus 330 ~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L 409 (968)
T PLN00113 330 SLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRV 409 (968)
T ss_pred cCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEE
Confidence 44555555555555444444444444444444444444444444433 334444444
Q ss_pred EccCccccCcCcccccCcccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCC
Q 042568 385 DLSKNKLSGSIPDSFANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHL 464 (983)
Q Consensus 385 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l 464 (983)
+|++|++++.+|..|.++++|+.|++++|.+++.+|..+..+++|+.|++++|++.+.+|..+ ...+|+. |++++|++
T Consensus 410 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~-L~ls~n~l 487 (968)
T PLN00113 410 RLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLEN-LDLSRNQF 487 (968)
T ss_pred ECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceE-EECcCCcc
Confidence 444444444444444444444444444444444444444445555555555555555555433 2356664 88888888
Q ss_pred CCCCccccccccccccccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCccccCCcCccc
Q 042568 465 DGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSF 544 (983)
Q Consensus 465 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 544 (983)
++.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|+++|.+|..+
T Consensus 488 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 567 (968)
T PLN00113 488 SGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNL 567 (968)
T ss_pred CCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceEeccCCccccccCCCCCCcccccccccCCcCccCCCC--CcccccCCCCccchhhHHHHHHHHHHHHHHHH-
Q 042568 545 QASPTLKQLNFSFNKFSGNISNKGAFSSLTIASFQGNDGLCGEIK--GLQTCKKEHTHHLVILSILLSLFAMSLLFIFG- 621 (983)
Q Consensus 545 ~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~N~~lc~~~~--~~~~c~~~~~~~~~~~~i~~~~~~~~~l~~~~- 621 (983)
.++++|++|++++|+++|.+|..+++..+...++.||+.+||.+. +.++|.........++++++++.+++++++++
T Consensus 568 ~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (968)
T PLN00113 568 GNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAF 647 (968)
T ss_pred hcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998652 34567543222211111111222222222222
Q ss_pred HhhhhhhccCCCccccCCCCchhHHHHHHhhcCCCCCHHHHHHHhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEee
Q 042568 622 NFLVLRSKFGKDLSVLNGADLEDEEKEKEEAKNPRVSYKQLIEATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLD 700 (983)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~ 700 (983)
+++++|++++.........+...+...........++++++. ..|...++||+|+||.||+|+. .++..||||.++
T Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~ 724 (968)
T PLN00113 648 GFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEIN 724 (968)
T ss_pred HHHHHHhhhcccccccccccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEcc
Confidence 222333322211111000000000000000111223444443 4577888999999999999996 578899999885
Q ss_pred cccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHH
Q 042568 701 LTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEG 780 (983)
Q Consensus 701 ~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~a 780 (983)
.... ...+|++++++++|||||+++++|...+..++||||+++|+|.++++ .++|..+.+|+.|+|+|
T Consensus 725 ~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~ 792 (968)
T PLN00113 725 DVNS-----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKA 792 (968)
T ss_pred CCcc-----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHH
Confidence 4322 22356889999999999999999999999999999999999999985 27899999999999999
Q ss_pred HHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCC
Q 042568 781 VAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR 860 (983)
Q Consensus 781 L~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 860 (983)
++|||..+..+|+||||||+||+++.++.+++. ||.+..... .....||+.|+|||++.+..
T Consensus 793 L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~t~~y~aPE~~~~~~ 854 (968)
T PLN00113 793 LRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----------------DTKCFISSAYVAPETRETKD 854 (968)
T ss_pred HHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----------------CCCccccccccCcccccCCC
Confidence 999997655579999999999999999988875 665543211 11136889999999999999
Q ss_pred CCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC-CcHHHHHHHhhcCCCCCccccccchHHHHHHHHH
Q 042568 861 ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR-LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIE 939 (983)
Q Consensus 861 ~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 939 (983)
++.|+|||||||++|||+||+.||+........+.+|....+... ....+++.+.. . .....+...++.+
T Consensus 855 ~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~ 925 (968)
T PLN00113 855 ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG----D-----VSVNQNEIVEVMN 925 (968)
T ss_pred CCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC----C-----CCccHHHHHHHHH
Confidence 999999999999999999999999766555666777766544322 11111111111 0 0111346678899
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHhHhhcC
Q 042568 940 LGLLCTQYNPSTRPSMLDVAHEMGRLKQYLS 970 (983)
Q Consensus 940 l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 970 (983)
++.+||+.+|++||+|+||+++|+++.+...
T Consensus 926 l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 926 LALHCTATDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred HHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence 9999999999999999999999998866443
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.7e-55 Score=555.87 Aligned_cols=467 Identities=38% Similarity=0.581 Sum_probs=373.6
Q ss_pred EEEEEcccCCcccccccccccCCCCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEeccC
Q 042568 79 VVELDLSARSIYGTISPALANLSSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGN 158 (983)
Q Consensus 79 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~ 158 (983)
++.|+|++|.+.+.+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|.+++.+|..++++++|++|+|++
T Consensus 142 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 221 (968)
T PLN00113 142 LETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGY 221 (968)
T ss_pred CCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcC
Confidence 45555555555555566666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cccccccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceecccccccc
Q 042568 159 NKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMFS 238 (983)
Q Consensus 159 N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 238 (983)
|++++.+|..+. .+++|++|++++|.+++.+|. .+.++++|++|+|++|++++.+|..+.++++|++|+|++|.++
T Consensus 222 n~l~~~~p~~l~---~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 297 (968)
T PLN00113 222 NNLSGEIPYEIG---GLTSLNHLDLVYNNLTGPIPS-SLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297 (968)
T ss_pred CccCCcCChhHh---cCCCCCEEECcCceeccccCh-hHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeec
Confidence 666666665543 556666666666666655553 3456666666666666666666666666666666666666666
Q ss_pred cccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCcc
Q 042568 239 GELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNL 318 (983)
Q Consensus 239 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~ 318 (983)
+.+|. .+..+++|++|++++|.+.. ..+..+..+++|++|++++|++.+.+|..++.+ .+|+.|++++|.
T Consensus 298 ~~~p~-~~~~l~~L~~L~l~~n~~~~--------~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~-~~L~~L~Ls~n~ 367 (968)
T PLN00113 298 GEIPE-LVIQLQNLEILHLFSNNFTG--------KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKH-NNLTVLDLSTNN 367 (968)
T ss_pred cCCCh-hHcCCCCCcEEECCCCccCC--------cCChhHhcCCCCCEEECcCCCCcCcCChHHhCC-CCCcEEECCCCe
Confidence 55543 34566666666666666543 234557778889999999999988888888877 579999999999
Q ss_pred ccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCccc
Q 042568 319 IYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDS 398 (983)
Q Consensus 319 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 398 (983)
+++.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|.+++.+|..|..+++|+.|++++|++++.+|..
T Consensus 368 l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 447 (968)
T PLN00113 368 LTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSR 447 (968)
T ss_pred eEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChh
Confidence 99889999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCCCCCCcccccccccc
Q 042568 399 FANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMV 478 (983)
Q Consensus 399 ~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L 478 (983)
+..+++|+.|++++|++.+.+|..+ ..++|+.|++++|++++.+|..+.++++|+. |+|++|++++.+|..+..+++|
T Consensus 448 ~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L 525 (968)
T PLN00113 448 KWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQ-LKLSENKLSGEIPDELSSCKKL 525 (968)
T ss_pred hccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCE-EECcCCcceeeCChHHcCccCC
Confidence 9999999999999999999888866 4589999999999999999999999999996 9999999999999999999999
Q ss_pred ccccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCccccCCcCccccCCCCcceEeccCC
Q 042568 479 LAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSFQASPTLKQLNFSFN 558 (983)
Q Consensus 479 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~N 558 (983)
+.|+|++|.++|.+|..|..+++|+.|+|++|+++|.+|..+..++.|+.|++++|+++|.+|.. +.+..+....+.+|
T Consensus 526 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n 604 (968)
T PLN00113 526 VSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST-GAFLAINASAVAGN 604 (968)
T ss_pred CEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc-chhcccChhhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999964 44455566667788
Q ss_pred c-ccc
Q 042568 559 K-FSG 562 (983)
Q Consensus 559 ~-l~~ 562 (983)
+ ++|
T Consensus 605 ~~lc~ 609 (968)
T PLN00113 605 IDLCG 609 (968)
T ss_pred ccccC
Confidence 6 444
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-50 Score=441.02 Aligned_cols=291 Identities=41% Similarity=0.630 Sum_probs=243.3
Q ss_pred cCCCCCHHHHHHHhCCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeE
Q 042568 653 KNPRVSYKQLIEATGGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITI 732 (983)
Q Consensus 653 ~~~~~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 732 (983)
....|+++++..||++|...++||+|+||.||+|..++|+.||||+++...... ..+|.+|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 456799999999999999999999999999999999999999999886655432 4669999999999999999999999
Q ss_pred EecCC-ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEE
Q 042568 733 CSKPD-FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTAL 811 (983)
Q Consensus 733 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~k 811 (983)
|.+.+ +.++|||||++|+|+++++..... .++|..|++||.++|+||+|||+.++++||||||||+|||+|+++.+|
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 99988 499999999999999999975432 899999999999999999999999888899999999999999999999
Q ss_pred EccccccccccCCcccccccCCCCccccccCcc-ccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCccc-C
Q 042568 812 VADFGIAKLVKGIDESVNCANDSMSFTSTDGLL-CGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLF-H 889 (983)
Q Consensus 812 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~-~ 889 (983)
|+|||+|+..+..... .... .||.+|+|||++..+..+.|+|||||||+++|++||+.|.+... .
T Consensus 218 lsDFGLa~~~~~~~~~-------------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~ 284 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTS-------------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR 284 (361)
T ss_pred ccCccCcccCCccccc-------------eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCc
Confidence 9999999654420111 1111 69999999999999999999999999999999999999987644 3
Q ss_pred CCCchHHHHHhhCCC-CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 890 DGSSLHEWVKRHYPH-RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 890 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
+...+.+|+...... .+.+++|+.+.... +. ..+.+.++.+++.+|++.+|++||+|.||+++|+.+...
T Consensus 285 ~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~-------~~--~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 285 GELSLVEWAKPLLEEGKLREIVDPRLKEGE-------YP--DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred ccccHHHHHHHHHHCcchhheeCCCccCCC-------CC--hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 344588887665544 34445554433200 00 015778899999999999999999999999999666543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-46 Score=382.77 Aligned_cols=260 Identities=25% Similarity=0.380 Sum_probs=214.4
Q ss_pred CCCHHHHHHHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEe
Q 042568 656 RVSYKQLIEATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICS 734 (983)
Q Consensus 656 ~~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 734 (983)
.++..++.. .+.||+|..|+|||++++ +++.+|+|.+......+..+++.+|+++++..+||+||++||.|.
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 355666654 688999999999999976 577799999977777778899999999999999999999999999
Q ss_pred cCC-ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEc
Q 042568 735 KPD-FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVA 813 (983)
Q Consensus 735 ~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~ 813 (983)
.+. ...++||||++|||++.+... .++++....+|+.+|++||.|||+.. +||||||||+|||++..|++|||
T Consensus 148 ~~~~~isI~mEYMDgGSLd~~~k~~----g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKic 221 (364)
T KOG0581|consen 148 SNGEEISICMEYMDGGSLDDILKRV----GRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKIC 221 (364)
T ss_pred eCCceEEeehhhcCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEec
Confidence 988 499999999999999998753 45899999999999999999999632 59999999999999999999999
Q ss_pred cccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCc
Q 042568 814 DFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSS 893 (983)
Q Consensus 814 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~ 893 (983)
|||.++.+... ...+++||..|||||.+.+..|+.++||||||++++|+++|+.||-....+...
T Consensus 222 DFGVS~~lvnS---------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~ 286 (364)
T KOG0581|consen 222 DFGVSGILVNS---------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD 286 (364)
T ss_pred cccccHHhhhh---------------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC
Confidence 99999877532 234578999999999999999999999999999999999999998643111111
Q ss_pred hHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 894 LHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 894 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
. -+.++..+.. .+...|.. ..++++..++..|++.||.+||+++|+++|=
T Consensus 287 ~------------~~Ll~~Iv~~-ppP~lP~~------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 287 I------------FELLCAIVDE-PPPRLPEG------EFSPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred H------------HHHHHHHhcC-CCCCCCcc------cCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 1 1222222221 22222211 3567899999999999999999999999864
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-45 Score=377.83 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=208.5
Q ss_pred CCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcc------hhHHHHHHHHHHHhcCCCCccceeeEEecCCce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGE------ITGSFKRECQILKRIRHRNLIRIITICSKPDFK 739 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 739 (983)
+.|.+.+.+|+|+||.|-+|. .++|+.||||++++..... ......+|+++|++++|||||+++++|..++..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 457778999999999999999 5589999999997653221 123457999999999999999999999999999
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC---CCEEEcccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED---LTALVADFG 816 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~---~~~kl~Dfg 816 (983)
||||||++||.|.+.+-.. ..+.+..-..+++|++.|+.|||++| |+||||||+|||+..+ ..+||+|||
T Consensus 252 YmVlE~v~GGeLfd~vv~n----k~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVAN----KYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred EEEEEEecCccHHHHHHhc----cccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999988753 44667777899999999999999997 9999999999999765 789999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCCCCC---CccchhHHHHHHHHHHHhCCCCCCcccCCCCc
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRA---STHGDVYSFGVLLLEIVTGRRPTDVLFHDGSS 893 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~ 893 (983)
+|+..+. ...+.+.+||+.|.|||++.+..+ ..++|+||+||++|-+++|.+||.....+..
T Consensus 325 lAK~~g~--------------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s- 389 (475)
T KOG0615|consen 325 LAKVSGE--------------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS- 389 (475)
T ss_pred hhhcccc--------------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-
Confidence 9998752 145667899999999999987543 4588999999999999999999975433221
Q ss_pred hHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 894 LHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 894 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+.+.+ ..+... .....|.++..+..+++.+|+..||++|||+.|+++|=+
T Consensus 390 l~eQI---------------~~G~y~-----f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 390 LKEQI---------------LKGRYA-----FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred HHHHH---------------hcCccc-----ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 22211 111111 122357789999999999999999999999999998754
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-44 Score=388.92 Aligned_cols=259 Identities=31% Similarity=0.494 Sum_probs=211.2
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCC-ceeEEEecccCc
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPD-FKALVLPLMSNG 749 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~g 749 (983)
.+.||+|+||+||+|.++....||||++...... +..++|.+|+.++.+++|||||+++|+|..+. ..++||||+++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 4569999999999999984444999999665422 23679999999999999999999999999888 789999999999
Q ss_pred ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC-CEEEccccccccccCCcccc
Q 042568 750 SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL-TALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 750 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~-~~kl~Dfgla~~~~~~~~~~ 828 (983)
+|.++++.. ....+++..+.+|+.|||+||.|||++++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 126 sL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--- 198 (362)
T KOG0192|consen 126 SLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--- 198 (362)
T ss_pred cHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc---
Confidence 999999864 25679999999999999999999999963 99999999999999997 99999999998765321
Q ss_pred cccCCCCccccccCccccccccccccccC--CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGM--GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
.......||+.|||||++. ...|+.|+||||||+++|||+||+.||..... ...
T Consensus 199 ----------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~------------- 254 (362)
T KOG0192|consen 199 ----------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQV------------- 254 (362)
T ss_pred ----------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHH-------------
Confidence 1112257999999999999 56999999999999999999999999975432 111
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhcCC
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYLSS 971 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 971 (983)
.............| ..++..+..++.+||..||+.||++.+++..|+.+......
T Consensus 255 ---~~~v~~~~~Rp~~p-------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 255 ---ASAVVVGGLRPPIP-------KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred ---HHHHHhcCCCCCCC-------ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 11111111111111 22667899999999999999999999999999999775554
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-43 Score=385.58 Aligned_cols=251 Identities=26% Similarity=0.384 Sum_probs=214.1
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
.+|...+.||+|||+.||.++. .+|+.||+|++.+.. .....+...+|++|.+.|+|||||+++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688899999999999999997 889999999997643 2335788999999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
|+|++++|..+++. ++++++.+++.+..||+.||.|||+++ |+|||||..|+++++++++||+|||+|..+..
T Consensus 98 ELC~~~sL~el~Kr----rk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR----RKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHHh----cCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecC
Confidence 99999999998873 567999999999999999999999996 99999999999999999999999999998874
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.++ ...+.+|||-|.|||++.....+..+||||+|||+|-|+.|++||+.. .
T Consensus 171 ~~E-------------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~---------- 222 (592)
T KOG0575|consen 171 DGE-------------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----T---------- 222 (592)
T ss_pred ccc-------------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----h----------
Confidence 422 223479999999999999999999999999999999999999999731 1
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+.+...+...... ..| .....+..+||..+++.+|.+|||+++|+.+=-
T Consensus 223 --vkety~~Ik~~~Y--~~P-------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~F 271 (592)
T KOG0575|consen 223 --VKETYNKIKLNEY--SMP-------SHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPF 271 (592)
T ss_pred --HHHHHHHHHhcCc--ccc-------cccCHHHHHHHHHHhcCCcccCCCHHHHhcCHh
Confidence 1222222222111 122 235678999999999999999999999997643
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-44 Score=356.01 Aligned_cols=257 Identities=22% Similarity=0.331 Sum_probs=207.9
Q ss_pred CCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceee-EEecCCc-eeEEEe
Q 042568 669 FCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIIT-ICSKPDF-KALVLP 744 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lv~e 744 (983)
|.+.++||+|.||+|||+. ..+|..||.|.+..... ...+.....|+.++++++|||||++++ .+.+... .+||||
T Consensus 21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE 100 (375)
T KOG0591|consen 21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVME 100 (375)
T ss_pred HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHH
Confidence 5567899999999999999 56899999998864432 235677889999999999999999999 4444444 799999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPI-KVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~-~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||.+|+|.+.++..+..++.+++..+|+++.|++.||.++|..-+. -|+||||||.||+++.+|.+|++|||+++++..
T Consensus 101 ~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s 180 (375)
T KOG0591|consen 101 LCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS 180 (375)
T ss_pred hhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcc
Confidence 9999999999987776678899999999999999999999984321 389999999999999999999999999998864
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. +.....+|||.||+||.+.+.+|+.|+||||+||++|||+.-+.||... .+.+.
T Consensus 181 ~~-------------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L------ 236 (375)
T KOG0591|consen 181 KT-------------TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSL------ 236 (375)
T ss_pred hh-------------HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHH------
Confidence 32 3445679999999999999999999999999999999999999998632 22221
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccch-HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVW-SDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
..++.....++ .+ +..+.++.+++..|+..||+.||+...+++.+.
T Consensus 237 ----------~~KI~qgd~~~----~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 237 ----------CKKIEQGDYPP----LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred ----------HHHHHcCCCCC----CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 11112212221 12 346778889999999999999999655555443
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-43 Score=362.19 Aligned_cols=200 Identities=32% Similarity=0.537 Sum_probs=180.2
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
-++|...+.||+|+||+||+|+++ ++..||||.+.+.. ..+..+.+..|+++++.++|||||++++++..++..++||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 357888888999999999999965 67889999997664 5556778899999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC------CCEEEccccc
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED------LTALVADFGI 817 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~------~~~kl~Dfgl 817 (983)
|||.||+|.++++.. ..+++..++.++.|+|.||++||+++ ||||||||+|||++.. -.+||+|||+
T Consensus 89 EyC~gGDLs~yi~~~----~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR----GRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 999999999999863 36999999999999999999999996 9999999999999764 4689999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDV 886 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~ 886 (983)
|+.+.+. ....+.+|++.|||||+++..+|+.|+|+||+|+|+|+|++|+.||+.
T Consensus 162 AR~L~~~--------------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 162 ARFLQPG--------------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhhCCch--------------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 9988743 233457899999999999999999999999999999999999999974
No 10
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=7.7e-46 Score=380.12 Aligned_cols=475 Identities=27% Similarity=0.388 Sum_probs=335.0
Q ss_pred EEEEEcccCCcccccccccccCCCCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEeccC
Q 042568 79 VVELDLSARSIYGTISPALANLSSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGN 158 (983)
Q Consensus 79 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~ 158 (983)
...++++.|.+. .+.+.+.+|..|++|++++|++. ..|++++.+..++.|+.|+|+++ .+|.+++++.+|..|++++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 567788888886 67788899999999999999998 88889999999999999999998 8999999999999999999
Q ss_pred cccccccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceecccccccc
Q 042568 159 NKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMFS 238 (983)
Q Consensus 159 N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 238 (983)
|.+. ++|.+++ .+..|..|+..+|+++ ..|.. +..+.+|..|++.+|+++...|+.+. ++.|++||+.+|-+.
T Consensus 124 n~~~-el~~~i~---~~~~l~dl~~~~N~i~-slp~~-~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~ 196 (565)
T KOG0472|consen 124 NELK-ELPDSIG---RLLDLEDLDATNNQIS-SLPED-MVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE 196 (565)
T ss_pred ccee-ecCchHH---HHhhhhhhhccccccc-cCchH-HHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh
Confidence 9998 7787776 5566667777777766 33332 23556666666666666644444333 666666666666664
Q ss_pred cccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCcc
Q 042568 239 GELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNL 318 (983)
Q Consensus 239 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~ 318 (983)
.+|.++ +.|.+|.-|+|..|++.. .+.|..++.|.+++++.|++. ++|...+.-..++..|||..|+
T Consensus 197 -tlP~~l-g~l~~L~~LyL~~Nki~~----------lPef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNk 263 (565)
T KOG0472|consen 197 -TLPPEL-GGLESLELLYLRRNKIRF----------LPEFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNK 263 (565)
T ss_pred -cCChhh-cchhhhHHHHhhhccccc----------CCCCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccc
Confidence 566553 556666666666666532 234555566666666666654 4444444222345555555555
Q ss_pred ccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCC--CcEEE-------ccCc
Q 042568 319 IYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPH--LGLLD-------LSKN 389 (983)
Q Consensus 319 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~-------Ls~N 389 (983)
++ ..|+.+.-+++|.+||+|+|.|+ ..|.+++++ +|+.|-+.+|.+..+-.+.+.+-+. |++|. ++.-
T Consensus 264 lk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~s 340 (565)
T KOG0472|consen 264 LK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQS 340 (565)
T ss_pred cc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCC
Confidence 54 45555555555555555555555 344455555 5555555555554211111111000 11110 0000
Q ss_pred c---cc-Cc-Ccc---cccCcccchhhcccCccCCCCCcccccCCCC---CCEEEccCccccCcCCccccCCCccceecc
Q 042568 390 K---LS-GS-IPD---SFANLSQLRRLLLYGNHLSGTIPSSLGKCVN---LEILDLSHNKISGIIPSDVAGLRSLKLYLN 458 (983)
Q Consensus 390 ~---l~-~~-~~~---~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~ 458 (983)
. -+ +. .+. ....+...+.|+++.-+++ .+|+....... .+.++++.|++. .+|..+..++.+...+.
T Consensus 341 e~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~ 418 (565)
T KOG0472|consen 341 EGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLV 418 (565)
T ss_pred cccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHH
Confidence 0 00 00 111 1234667888999999998 67776555444 788999999998 88988888887766577
Q ss_pred ccCCCCCCCCccccccccccccccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCccccC
Q 042568 459 LSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFG 538 (983)
Q Consensus 459 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 538 (983)
+++|.++ .+|..++.+++|..|+|++|-+. .+|..++.+..|+.|++|.|+|. .+|..+..+..|+.+-.++|++..
T Consensus 419 lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~ 495 (565)
T KOG0472|consen 419 LSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGS 495 (565)
T ss_pred hhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccc
Confidence 8888776 88999999999999999999998 89999999999999999999998 789888888888888888899985
Q ss_pred CcCccccCCCCcceEeccCCccccccCCCCCCcccccccccCCcCc
Q 042568 539 EIPQSFQASPTLKQLNFSFNKFSGNISNKGAFSSLTIASFQGNDGL 584 (983)
Q Consensus 539 ~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~N~~l 584 (983)
.-|..+.+|.+|..|||.+|.+...+|..+.+.++..+.+.|||+-
T Consensus 496 vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 496 VDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 5555599999999999999999999999999999999999999865
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.3e-42 Score=339.86 Aligned_cols=271 Identities=20% Similarity=0.309 Sum_probs=209.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
+.|+...++|+|+||+|||++++ +|+.||||+|....+ +...+-..+|++++++++|||+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35777889999999999999965 689999999965554 4456678899999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
||+..-|.+ +... ...++...+.++++|+++|+.|+|++. +|||||||+|||+++++.+|+||||.|+.+...
T Consensus 82 ~~dhTvL~e-Le~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 82 YCDHTVLHE-LERY---PNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred ecchHHHHH-HHhc---cCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 998744433 4332 456899999999999999999999995 999999999999999999999999999988743
Q ss_pred cccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh--
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH-- 901 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~-- 901 (983)
.+. ...++.|.+|+|||.+.| .+|+..+||||.||++.||++|.+-| ++..++.+.....
T Consensus 155 gd~-------------YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~----PG~SDiDQLy~I~kt 217 (396)
T KOG0593|consen 155 GDN-------------YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLW----PGRSDIDQLYLIRKT 217 (396)
T ss_pred cch-------------hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCC----CCcchHHHHHHHHHH
Confidence 221 234689999999999988 78999999999999999999999865 3444443332211
Q ss_pred ---CCCCCcHHHHHH--Hhh--cCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 902 ---YPHRLDPIVEKA--IAK--YAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 902 ---~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..++-..++... ..+ .+...-+...+..++....-+++++..|++.||.+|++.+|++.+
T Consensus 218 LG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 218 LGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred HcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 111111111110 000 011111222334455667789999999999999999999999853
No 12
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=366.22 Aligned_cols=254 Identities=32% Similarity=0.480 Sum_probs=209.0
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
.+.||+|-||+||.|.++....||+|.++.... ..+.|.+|+++|++++|++||+++++|..++..+||||||+.|+|
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEecccc--ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 577999999999999999888999999965432 357899999999999999999999999998899999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++.... ...+...+.+.++.|||+|++||+++. +|||||.+.|||++++..+||+|||+|+...+......
T Consensus 289 l~yLr~~~--~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~-- 361 (468)
T KOG0197|consen 289 LDYLRTRE--GGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS-- 361 (468)
T ss_pred HHHhhhcC--CCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCceeec--
Confidence 99998733 567899999999999999999999995 99999999999999999999999999995443322111
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIV 910 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 910 (983)
....-...|.|||.+....++.|||||||||++|||+| |+.||..+ +..+ ++
T Consensus 362 ----------~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-----sn~e------------v~ 414 (468)
T KOG0197|consen 362 ----------EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-----SNEE------------VL 414 (468)
T ss_pred ----------CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC-----CHHH------------HH
Confidence 11122457999999999999999999999999999999 88887543 2222 12
Q ss_pred HHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhc
Q 042568 911 EKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYL 969 (983)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 969 (983)
+ .+........| +.|+.++.++|..||+.+|++|||++.+...++++....
T Consensus 415 ~-~le~GyRlp~P-------~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 415 E-LLERGYRLPRP-------EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred H-HHhccCcCCCC-------CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 2 22222222112 348899999999999999999999999998888876543
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-41 Score=347.16 Aligned_cols=249 Identities=27% Similarity=0.366 Sum_probs=204.2
Q ss_pred hCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
.+.|++.++||+|+||+||+++. ++++.+|+|++++..- ....+....|..++.+++||.||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 35788999999999999999995 4688899999966542 22467889999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
+||+.||.|..+++.. ..+++..+.-++..|+.||.|||+.+ |||||+||+|||+|.+|+++|+|||+++..-
T Consensus 104 ld~~~GGeLf~hL~~e----g~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE----GRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EeccCCccHHHHHHhc----CCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 9999999999999853 45889999999999999999999997 9999999999999999999999999998543
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
... ..+.+.+||+.|||||++.+..|+..+|.||+|+++|||++|.+||... +.
T Consensus 177 ~~~-------------~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~-----~~-------- 230 (357)
T KOG0598|consen 177 KDG-------------DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE-----DV-------- 230 (357)
T ss_pred cCC-------------CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc-----cH--------
Confidence 322 2334579999999999999999999999999999999999999998632 11
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC----CHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP----SMLDVA 959 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP----s~~evl 959 (983)
..++++..... ....+.+ ...+..+++.+.+..||++|. ++.++.
T Consensus 231 ----~~~~~~I~~~k-~~~~p~~-------ls~~ardll~~LL~rdp~~RLg~~~d~~~ik 279 (357)
T KOG0598|consen 231 ----KKMYDKILKGK-LPLPPGY-------LSEEARDLLKKLLKRDPRQRLGGPGDAEEIK 279 (357)
T ss_pred ----HHHHHHHhcCc-CCCCCcc-------CCHHHHHHHHHHhccCHHHhcCCCCChHHhh
Confidence 22222222221 1111111 346788999999999999996 455544
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-41 Score=365.86 Aligned_cols=257 Identities=29% Similarity=0.469 Sum_probs=209.2
Q ss_pred CCCCccccCCcEeEEEEEECCCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 670 CPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
...+.||+|.||+||+|.|. ..||||+++... ..+..+.|+.|+.++++-||.||+-+.|||..+.. .||+.+|+|
T Consensus 395 ~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeG 471 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEG 471 (678)
T ss_pred hccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccC
Confidence 34788999999999999985 469999997654 33467899999999999999999999999999888 999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
-+|..+++.. ..+++..+.+.|++|||+|+.|||.+. |||||+|..||++.+++.|||+|||++..-......
T Consensus 472 sSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~- 544 (678)
T KOG0193|consen 472 SSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE- 544 (678)
T ss_pred chhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeeeeeeccc-
Confidence 9999999865 467999999999999999999999995 999999999999999999999999999865433111
Q ss_pred cccCCCCccccccCccccccccccccccCC---CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMG---KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.......|...|||||+++. .+|++.+||||||+|+|||++|..||... ..
T Consensus 545 ----------~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~--~~-------------- 598 (678)
T KOG0193|consen 545 ----------QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ--NR-------------- 598 (678)
T ss_pred ----------cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC--Ch--------------
Confidence 22233568899999999874 46899999999999999999999998621 11
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHh
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQ 967 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 967 (983)
|+.+......-...-..+...++++++.+|+..||.+++++||.+.+|+..|+.+..
T Consensus 599 -----dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 599 -----DQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred -----hheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 111111111111111122335688899999999999999999999999998887765
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=355.34 Aligned_cols=266 Identities=22% Similarity=0.321 Sum_probs=214.3
Q ss_pred HHhCCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCce
Q 042568 664 EATGGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFK 739 (983)
Q Consensus 664 ~~~~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 739 (983)
....+|...+.||+|+|++||+|+ ..+++.||||++.+.- .+...+...+|-++|.+| .||.|++++..|.++...
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 344678889999999999999999 4578899999986542 122346678899999999 899999999999999999
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
|+|+||+++|.|.+++.+. ..+++...+.++.+|+.||+|||++| ||||||||+|||+|++|+++|+|||.|+
T Consensus 150 YFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred EEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccc
Confidence 9999999999999999864 45899999999999999999999997 9999999999999999999999999999
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
.+.+......-..+..........++||..|.+||++.....++.+|+|+||||+|+|+.|++||...-+
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne---------- 292 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE---------- 292 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH----------
Confidence 9987654422111111111223558999999999999999999999999999999999999999964210
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.-++++.+.-... .| +..++.+.+|+.+.+..||.+|++++||.+|-
T Consensus 293 -------yliFqkI~~l~y~--fp-------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 293 -------YLIFQKIQALDYE--FP-------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred -------HHHHHHHHHhccc--CC-------CCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 1122222221111 11 11336788999999999999999999998763
No 16
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=360.28 Aligned_cols=249 Identities=23% Similarity=0.360 Sum_probs=209.0
Q ss_pred CCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
.|..-.+||+|+.|.||.|. ..+++.||||+++..... ..+-+..|+.+|+..+|+|||.+++.|...++.++|||||
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~-~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP-KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC-chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 45556789999999999999 557888999999877655 3567889999999999999999999999889999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
+||+|.+.+.. ..+++.++..|++++++||+|||.++ |+|||||.+|||++.+|.+||+|||.+..+.....
T Consensus 353 ~ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 353 EGGSLTDVVTK-----TRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred CCCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 99999998873 45999999999999999999999997 99999999999999999999999999987764332
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
...+.+||+.|||||+.....|++|+||||||++++||+.|.+||-. +..+...
T Consensus 425 -------------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAl--------- 478 (550)
T KOG0578|consen 425 -------------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRAL--------- 478 (550)
T ss_pred -------------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CChHHHH---------
Confidence 33457899999999999999999999999999999999999999842 1111111
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+.....|.. +.++..+.++.+++.+|++.||++||+++|+++|
T Consensus 479 --------yLIa~ng~P~l--k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 479 --------YLIATNGTPKL--KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred --------HHHhhcCCCCc--CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 11111111111 1235578899999999999999999999999985
No 17
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.9e-40 Score=322.13 Aligned_cols=267 Identities=22% Similarity=0.364 Sum_probs=209.6
Q ss_pred CCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcc-hhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGE-ITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
.+|...+++|+|.||.||+|+ ..+|+.||||+++.....+ ......+|++.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 467778999999999999999 5589999999997765443 34578899999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
||+. +|+..+... ...+...++..++.++++|++|+|.+. |+|||+||.|+|++.+|.+||+|||+|+.+...
T Consensus 82 fm~t-dLe~vIkd~---~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDK---NIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhccc---ccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9974 888888754 456889999999999999999999997 999999999999999999999999999988754
Q ss_pred cccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH----
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK---- 899 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~---- 899 (983)
... ....+-|..|+|||.+.| +.|+..+|+||.|||+.||+-|.+-| +++.++.+...
T Consensus 155 ~~~-------------~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~f----pG~sDidQL~~If~~ 217 (318)
T KOG0659|consen 155 NRI-------------QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFF----PGDSDIDQLSKIFRA 217 (318)
T ss_pred Ccc-------------cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCC----CCCchHHHHHHHHHH
Confidence 322 111267899999999988 56899999999999999999887643 33444443322
Q ss_pred ------hhCCCCCcHHHHHH-HhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 900 ------RHYPHRLDPIVEKA-IAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 900 ------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
+.+|+. ...-|-. +..... +.....+..+..++.+++..|+.+||.+|++++|++++=
T Consensus 218 LGTP~~~~WP~~-~~lpdY~~~~~~P~----~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~ 282 (318)
T KOG0659|consen 218 LGTPTPDQWPEM-TSLPDYVKIQQFPK----PPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP 282 (318)
T ss_pred cCCCCcccCccc-cccccHHHHhcCCC----CccccccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence 112211 1111110 111111 111224556778889999999999999999999999763
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-41 Score=355.01 Aligned_cols=272 Identities=21% Similarity=0.266 Sum_probs=213.2
Q ss_pred hCCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCC-ceeEE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKPD-FKALV 742 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~lv 742 (983)
.++|...++||.|+||.||+|+ ..+++.||||+++.....-..-.-.||++.+++++ |||||++.+++.+.+ ..++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 4577788999999999999999 55789999999876544322233468999999998 999999999999888 99999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
||||+. +|.+.+... .+.+++..++.|+.||++||+|+|++| +.|||+||+|||+.....+||+|||+|+.+.
T Consensus 89 fE~Md~-NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred HHhhhh-hHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccc
Confidence 999974 999988765 567999999999999999999999997 9999999999999999999999999999764
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh-
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR- 900 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~- 900 (983)
.. ...+.++.|.+|+|||++.. ..|+.++|+||+|||++|+.+-++-| ++...+.+..+.
T Consensus 162 Sk--------------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLF----PG~sE~Dqi~KIc 223 (538)
T KOG0661|consen 162 SK--------------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLF----PGASEIDQIYKIC 223 (538)
T ss_pred cC--------------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccC----CCCcHHHHHHHHH
Confidence 32 23345789999999998765 67899999999999999999988765 333333333221
Q ss_pred --hCCCC---Cc--HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 901 --HYPHR---LD--PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 901 --~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.-.+. .. ..+...+....++..+.........+..++.+++.+|+++||.+|||++|++++-
T Consensus 224 ~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 224 EVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 11111 11 1122223333333333334444455788999999999999999999999999864
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-40 Score=346.14 Aligned_cols=265 Identities=23% Similarity=0.349 Sum_probs=211.6
Q ss_pred CCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+.|+..++||.|..++||+|+ .+.++.||||+++.+......+.+.+|+..++.++||||++++..|......|+||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 467888999999999999999 5578999999999887777789999999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
|.+||+.+.+.... ...+++..+..|.+++++||.|||.+| .||||||+.|||++.+|.+||+|||.+..+....
T Consensus 106 Ma~GS~ldIik~~~--~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYY--PDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hcCCcHHHHHHHHc--cccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 99999999998654 456999999999999999999999997 9999999999999999999999999987665433
Q ss_pred ccccccCCCCccccccCccccccccccccccCC--CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG--KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
... .....+.+||+.|||||++.. ..|+.|+||||||++..|+.+|..||....+-+. +-.-+....|
T Consensus 181 ~R~---------~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-Ll~tLqn~pp 250 (516)
T KOG0582|consen 181 DRQ---------VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV-LLLTLQNDPP 250 (516)
T ss_pred cee---------eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-HHHHhcCCCC
Confidence 111 112256789999999999543 5799999999999999999999999975422111 1111111111
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.......+ ..........+.+++..|++.||++|||+++++++
T Consensus 251 ~~~t~~~~---------------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 251 TLLTSGLD---------------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CcccccCC---------------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 00000000 00011234567888888999999999999999964
No 20
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=351.08 Aligned_cols=265 Identities=26% Similarity=0.401 Sum_probs=214.7
Q ss_pred cCCCCCHHHHHHHhCCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeE
Q 042568 653 KNPRVSYKQLIEATGGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITI 732 (983)
Q Consensus 653 ~~~~~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 732 (983)
....+.+++|.+ ++-+|+|+.|.||+|+++ ++.||||+++ +.-..+|+-|++++||||+.+.|+
T Consensus 117 e~WeiPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~--------elkETdIKHLRkLkH~NII~FkGV 180 (904)
T KOG4721|consen 117 ELWEIPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVR--------ELKETDIKHLRKLKHPNIITFKGV 180 (904)
T ss_pred hhccCCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHh--------hhhhhhHHHHHhccCcceeeEeee
Confidence 345667777765 678999999999999987 7889999762 233458889999999999999999
Q ss_pred EecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEE
Q 042568 733 CSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALV 812 (983)
Q Consensus 733 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl 812 (983)
|....-++||||||..|-|...++. ...+.......|..+||.|+.|||.+. |||||+|.-|||+..+..+||
T Consensus 181 CtqsPcyCIiMEfCa~GqL~~VLka----~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKI 253 (904)
T KOG4721|consen 181 CTQSPCYCIIMEFCAQGQLYEVLKA----GRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKI 253 (904)
T ss_pred ecCCceeEEeeeccccccHHHHHhc----cCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEe
Confidence 9999999999999999999999975 456888899999999999999999994 999999999999999999999
Q ss_pred ccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCC
Q 042568 813 ADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGS 892 (983)
Q Consensus 813 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~ 892 (983)
+|||.++...+..+. + .++||..|||||++...++++|+||||||||+|||+||..||..... .
T Consensus 254 sDFGTS~e~~~~STk-------M-------SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds--s 317 (904)
T KOG4721|consen 254 SDFGTSKELSDKSTK-------M-------SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS--S 317 (904)
T ss_pred ccccchHhhhhhhhh-------h-------hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch--h
Confidence 999999877643222 1 25799999999999999999999999999999999999999864210 0
Q ss_pred chHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh-cCC
Q 042568 893 SLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY-LSS 971 (983)
Q Consensus 893 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~-~~~ 971 (983)
..|+......+.. .....|+..+.-|+.+||+..|..||++.+++.||...... ...
T Consensus 318 -------------------AIIwGVGsNsL~L---pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~~ 375 (904)
T KOG4721|consen 318 -------------------AIIWGVGSNSLHL---PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLST 375 (904)
T ss_pred -------------------eeEEeccCCcccc---cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhcc
Confidence 0122222221111 11245888899999999999999999999999999866433 344
Q ss_pred CchhHHH
Q 042568 972 PSSLIEE 978 (983)
Q Consensus 972 ~~~~~~~ 978 (983)
+++-+..
T Consensus 376 tee~yf~ 382 (904)
T KOG4721|consen 376 TEETYFK 382 (904)
T ss_pred cHHHHHH
Confidence 4444433
No 21
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=7.3e-44 Score=365.60 Aligned_cols=451 Identities=28% Similarity=0.406 Sum_probs=372.5
Q ss_pred eEEEEEcccCCcccccccccccCCCCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEecc
Q 042568 78 KVVELDLSARSIYGTISPALANLSSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLG 157 (983)
Q Consensus 78 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls 157 (983)
..+.++++.+.+. ++|++++.+..++.|+.++|+++ ++|+.++.+.+|++|+.++|.+. .+|+.++.+..|+.|+..
T Consensus 69 ~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~ 145 (565)
T KOG0472|consen 69 CLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDAT 145 (565)
T ss_pred ceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhcc
Confidence 4888999999997 89999999999999999999999 99999999999999999999999 899999999999999999
Q ss_pred CcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceeccccccc
Q 042568 158 NNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMF 237 (983)
Q Consensus 158 ~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 237 (983)
+|+++ ..|..++ ++.+|..|++.+|.++ ..|.... +++.|++|+..+|-+. .+|..++.+.+|+.|+|.+|++
T Consensus 146 ~N~i~-slp~~~~---~~~~l~~l~~~~n~l~-~l~~~~i-~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki 218 (565)
T KOG0472|consen 146 NNQIS-SLPEDMV---NLSKLSKLDLEGNKLK-ALPENHI-AMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKI 218 (565)
T ss_pred ccccc-cCchHHH---HHHHHHHhhccccchh-hCCHHHH-HHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhccc
Confidence 99998 7888876 7899999999999999 4554544 4999999999999988 7888999999999999999999
Q ss_pred ccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCc
Q 042568 238 SGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCN 317 (983)
Q Consensus 238 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N 317 (983)
. .+| -|..+..|++|+++.|+|...+. .....++++..|||++|+++ ..|..+..+ .+|..||+++|
T Consensus 219 ~-~lP--ef~gcs~L~Elh~g~N~i~~lpa--------e~~~~L~~l~vLDLRdNklk-e~Pde~clL-rsL~rLDlSNN 285 (565)
T KOG0472|consen 219 R-FLP--EFPGCSLLKELHVGENQIEMLPA--------EHLKHLNSLLVLDLRDNKLK-EVPDEICLL-RSLERLDLSNN 285 (565)
T ss_pred c-cCC--CCCccHHHHHHHhcccHHHhhHH--------HHhcccccceeeeccccccc-cCchHHHHh-hhhhhhcccCC
Confidence 8 888 36889999999999999865432 23458999999999999998 688888877 57999999999
Q ss_pred cccccCCCCCCCCCcccEEeccccccCCCCCccc-ccCC--CCcEEE--eeCCccc---------CC-CCCC---CCCCC
Q 042568 318 LIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHEL-CLMS--KLERVY--LSNNSLS---------GE-IPSA---FGDIP 379 (983)
Q Consensus 318 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~--~L~~L~--L~~N~l~---------~~-~p~~---~~~l~ 379 (983)
.|+ .+|.+++++ +|+.|-+.+|.+.. +...+ ..-+ -|++|. +..-+++ +. .+.. ...+.
T Consensus 286 ~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i 362 (565)
T KOG0472|consen 286 DIS-SLPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAII 362 (565)
T ss_pred ccc-cCCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhh
Confidence 999 689999999 99999999999862 22111 1100 011110 0001111 01 1111 23456
Q ss_pred CCcEEEccCccccCcCcccccCccc---chhhcccCccCCCCCcccccCCCCCC-EEEccCccccCcCCccccCCCccce
Q 042568 380 HLGLLDLSKNKLSGSIPDSFANLSQ---LRRLLLYGNHLSGTIPSSLGKCVNLE-ILDLSHNKISGIIPSDVAGLRSLKL 455 (983)
Q Consensus 380 ~L~~L~Ls~N~l~~~~~~~~~~l~~---L~~L~l~~N~l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~ 455 (983)
+.+.|+++.=+++ .+|+......+ .+..+++.|++. ++|..+..++.+. .+++++|.++ .+|..++.++++..
T Consensus 363 ~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~ 439 (565)
T KOG0472|consen 363 TTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTF 439 (565)
T ss_pred hhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhccee
Confidence 7888999998888 45554443333 788899999998 7888777777654 4556666665 88888899999985
Q ss_pred eccccCCCCCCCCccccccccccccccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCcc
Q 042568 456 YLNLSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNR 535 (983)
Q Consensus 456 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 535 (983)
|+|++|.+. .+|.+++.+..|+.||+|.|+|. .+|..+-.+..|+.+-.++|++..+.|..+.++.+|..|||.+|.
T Consensus 440 -L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNd 516 (565)
T KOG0472|consen 440 -LDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNND 516 (565)
T ss_pred -eecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCc
Confidence 999999887 78999999999999999999998 889988888888888888899997777779999999999999999
Q ss_pred ccCCcCccccCCCCcceEeccCCccc
Q 042568 536 LFGEIPQSFQASPTLKQLNFSFNKFS 561 (983)
Q Consensus 536 l~~~~p~~~~~l~~L~~l~l~~N~l~ 561 (983)
+. .||+.+++|++|++|++.+|+|.
T Consensus 517 lq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 517 LQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hh-hCChhhccccceeEEEecCCccC
Confidence 98 89999999999999999999998
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-39 Score=345.76 Aligned_cols=272 Identities=23% Similarity=0.307 Sum_probs=204.4
Q ss_pred CCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecC--CceeEEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKP--DFKALVL 743 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 743 (983)
.|+..++||+|+||.||||+ ..+|+.||+|++.....+ +...-..+||.||+++.||||+++.+...+. ...|+|+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 45567889999999999999 568999999999776633 3456678999999999999999999998776 6889999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
|||++ +|.-++... .-.+++.++..++.|+++||+|+|.++ |+|||||.+|||+|.+|.+||+|||+|+++..
T Consensus 198 eYMdh-DL~GLl~~p---~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSP---GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred ecccc-hhhhhhcCC---CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccC
Confidence 99987 776666532 346999999999999999999999997 99999999999999999999999999998875
Q ss_pred CcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.... .....+-|.+|+|||++.| ..|+..+|+||.|||+.||++|++.|....+ -..+..+++-.-
T Consensus 271 ~~~~------------~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE-veQl~kIfklcG 337 (560)
T KOG0600|consen 271 SGSA------------PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE-VEQLHKIFKLCG 337 (560)
T ss_pred CCCc------------ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH-HHHHHHHHHHhC
Confidence 4422 1233578999999999998 4799999999999999999999998753211 111122221110
Q ss_pred CC--CCcHHHHHHHhhcCCC----CCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PH--RLDPIVEKAIAKYAPQ----HMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+ ...+. ..+...... ..+...+..+...+...++|+..++..||.+|.|+.++++.
T Consensus 338 SP~e~~W~~--~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 338 SPTEDYWPV--SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CCChhcccc--ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 10 01110 000000000 00111112233456678999999999999999999999864
No 23
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-41 Score=359.53 Aligned_cols=363 Identities=25% Similarity=0.298 Sum_probs=240.3
Q ss_pred CCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCccccee
Q 042568 102 SLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYI 181 (983)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L 181 (983)
.-+.|||++|.+...-+..|.++++|++++|.+|.++ .||...+...+|+.|+|.+|.|+..-...+ ..++.|++|
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L---~~l~alrsl 154 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEEL---SALPALRSL 154 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHH---HhHhhhhhh
Confidence 3456999999999888888999999999999999998 899877777789999999999983322223 478899999
Q ss_pred ecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceecccccccccccchhhhcCCCCccEEEccccc
Q 042568 182 DLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYND 261 (983)
Q Consensus 182 ~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~ 261 (983)
|||.|.|+ +||...|..-.++++|+|++|+|+......|.++.+|.+|.|++|+++ .+|...|+++++|+.|+|..|+
T Consensus 155 DLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~ 232 (873)
T KOG4194|consen 155 DLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNRNR 232 (873)
T ss_pred hhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhccccc
Confidence 99999998 888888888889999999999999988999999999999999999998 8999999999999999999999
Q ss_pred cccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEEecccc
Q 042568 262 FVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSN 341 (983)
Q Consensus 262 l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 341 (983)
|.-..+ -.|..+++|+.|.|..|.+...-...|..+ .++++|+|+.|++...-..++.+++.|+.|+||+|
T Consensus 233 irive~--------ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l-~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~N 303 (873)
T KOG4194|consen 233 IRIVEG--------LTFQGLPSLQNLKLQRNDISKLDDGAFYGL-EKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYN 303 (873)
T ss_pred eeeehh--------hhhcCchhhhhhhhhhcCcccccCcceeee-cccceeecccchhhhhhcccccccchhhhhccchh
Confidence 865433 345666777777777776664444444444 34555555555555444445555555555555555
Q ss_pred ccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhcccCccCCCCCcc
Q 042568 342 LLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHLSGTIPS 421 (983)
Q Consensus 342 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 421 (983)
.|..+-++.+...++|+.|+|++|+|+...+..|..+..|++|+|+.|.++..-...|..+++|+.|+|++|.|+..+.+
T Consensus 304 aI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 304 AIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred hhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 55544445555555555555555555544444555555555555555555544444455555555555555554433221
Q ss_pred ---cccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCCCCCCccccccccccccc
Q 042568 422 ---SLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAI 481 (983)
Q Consensus 422 ---~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L 481 (983)
.|..+++|+.|+|.+|++..+.-..|.++..|+. |||.+|.|..+-|.+|..+ .|++|
T Consensus 384 aa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~-LdL~~NaiaSIq~nAFe~m-~Lk~L 444 (873)
T KOG4194|consen 384 AAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEH-LDLGDNAIASIQPNAFEPM-ELKEL 444 (873)
T ss_pred chhhhccchhhhheeecCceeeecchhhhccCcccce-ecCCCCcceeecccccccc-hhhhh
Confidence 2344444444444444444333334444444443 4444444444444444444 34433
No 24
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=344.42 Aligned_cols=262 Identities=26% Similarity=0.445 Sum_probs=204.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCC--ceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPD--FKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 743 (983)
.+|...+.||+|+||.||++... +|+..|||......... .+.+.+|++++.+++|||||+++|...... ..++.|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 34666889999999999999965 48999999987663332 677899999999999999999999855444 589999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC-CCCEEEcccccccccc
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE-DLTALVADFGIAKLVK 822 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~-~~~~kl~Dfgla~~~~ 822 (983)
||+++|+|.+++....+ ++++..+..+..||++||+|||+++ ||||||||+|||++. ++.+||+|||+++...
T Consensus 96 Ey~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 99999999999986542 6999999999999999999999996 999999999999999 7999999999998765
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
..... ........||+.|||||++..+ ...+++||||+||++.||+||+.||.... .. ..
T Consensus 170 ~~~~~----------~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~---~~-~~----- 230 (313)
T KOG0198|consen 170 SKGTK----------SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF---EE-AE----- 230 (313)
T ss_pred ccccc----------ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc---ch-HH-----
Confidence 31100 1222346799999999999953 34469999999999999999999986420 00 00
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
..+.- ......| ......+.+..+++.+|++.+|++|||+++++++.-...+.
T Consensus 231 ------~~~~i----g~~~~~P----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 231 ------ALLLI----GREDSLP----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred ------HHHHH----hccCCCC----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 00100 0000111 11133667889999999999999999999999987654433
No 25
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.4e-39 Score=357.87 Aligned_cols=264 Identities=27% Similarity=0.410 Sum_probs=205.2
Q ss_pred hCCCCCCCccccCCcEeEEEEEE------CCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCC-
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVL------QDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPD- 737 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~- 737 (983)
.++|.+.++||+|+||.||+|.+ .+++.||||++...........+.+|+++++++ +||||++++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 35788899999999999999974 234679999987554444456799999999999 8999999999887654
Q ss_pred ceeEEEecccCcccccccccccC---------------------------------------------------------
Q 042568 738 FKALVLPLMSNGSLENHLYPSHG--------------------------------------------------------- 760 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 760 (983)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 57899999999999988764321
Q ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCcccc
Q 042568 761 -LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTS 839 (983)
Q Consensus 761 -~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~ 839 (983)
....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++........ .
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~-----------~ 231 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-----------V 231 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcch-----------h
Confidence 0234888999999999999999999986 999999999999999999999999999865432111 1
Q ss_pred ccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcC
Q 042568 840 TDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYA 918 (983)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 918 (983)
......+++.|+|||++.+..++.++|||||||++|||++ |+.||.....+ +.+...+....
T Consensus 232 ~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-----------------~~~~~~~~~~~ 294 (338)
T cd05102 232 RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-----------------EEFCQRLKDGT 294 (338)
T ss_pred cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-----------------HHHHHHHhcCC
Confidence 1122346788999999999999999999999999999997 99998642111 11111111111
Q ss_pred CCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHh
Q 042568 919 PQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQ 967 (983)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 967 (983)
....+ ..++.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 295 ~~~~~-------~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 295 RMRAP-------ENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CCCCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11111 1245678999999999999999999999999998765
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.1e-39 Score=345.78 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=207.8
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+++... ++..+.+.+|+++++.++|||||.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46778899999999999999954 678899999976543 3356789999999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+.| +|..++.. ...++++.+..|+.+++.||.|||+.+ |+|||+||.|||+++.+.+|+||||+|+.+...
T Consensus 82 ~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 9987 99999976 346999999999999999999999995 999999999999999999999999999987642
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. .....+.|||.|||||...+..|+..+|.||+||++||+++|++||... ++
T Consensus 154 t-------------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si---------- 205 (808)
T KOG0597|consen 154 T-------------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SI---------- 205 (808)
T ss_pred c-------------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HH----------
Confidence 1 2223467999999999999999999999999999999999999998521 11
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+.++....+.. ..| ......+..++...+..||..|.+-.+++.|
T Consensus 206 --~~Lv~~I~~d~v--~~p-------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 206 --TQLVKSILKDPV--KPP-------STASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred --HHHHHHHhcCCC--CCc-------ccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 122222221111 111 2466788999999999999999999999864
No 27
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-39 Score=333.94 Aligned_cols=266 Identities=26% Similarity=0.379 Sum_probs=209.2
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhc--CCCCccceeeEEecC----Ccee
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRI--RHRNLIRIITICSKP----DFKA 740 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~~~~ 740 (983)
..-...+.||+|.||+||+|.|+ |+.||||+|... ..+.+.+|.+|++.+ ||+||+.+++.-... .+.+
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 34556788999999999999998 999999999533 246788999999874 999999999987544 3679
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHh-----ccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLH-----HHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH-----~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
+|++|.+.|||.|++. +..++...+++++..+|.||+||| .+|++.|.|||||++|||+.+++.+.|+|+
T Consensus 286 LvTdYHe~GSL~DyL~-----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLN-----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EeeecccCCcHHHHHh-----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 9999999999999998 467999999999999999999999 467889999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCCC------CCccchhHHHHHHHHHHHhCC--------
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR------ASTHGDVYSFGVLLLEIVTGR-------- 881 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~k~Dv~SlG~il~elltg~-------- 881 (983)
|+|.......... .......+||.+|||||++...- .-..+||||||.|+||++...
T Consensus 361 GLAv~h~~~t~~i---------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~ee 431 (513)
T KOG2052|consen 361 GLAVRHDSDTDTI---------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEE 431 (513)
T ss_pred eeeEEecccCCcc---------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehh
Confidence 9998776543222 13334568999999999987532 124589999999999998743
Q ss_pred --CCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccch--HHHHHHHHHHHhhhcCCCCCCCCCHHH
Q 042568 882 --RPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVW--SDVVLELIELGLLCTQYNPSTRPSMLD 957 (983)
Q Consensus 882 --~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~RPs~~e 957 (983)
.||.+..+.+.++.++ ..-...++.++.....| .+++..+.++|..||..+|..|.|+-.
T Consensus 432 y~~Pyyd~Vp~DPs~eeM----------------rkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALr 495 (513)
T KOG2052|consen 432 YQLPYYDVVPSDPSFEEM----------------RKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALR 495 (513)
T ss_pred hcCCcccCCCCCCCHHHH----------------hcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHH
Confidence 3554443333333332 22222222222222333 457888999999999999999999999
Q ss_pred HHHHHHHhHh
Q 042568 958 VAHEMGRLKQ 967 (983)
Q Consensus 958 vl~~L~~~~~ 967 (983)
+.+.|.++.+
T Consensus 496 iKKtl~~l~~ 505 (513)
T KOG2052|consen 496 IKKTLAKLSN 505 (513)
T ss_pred HHHHHHHHhc
Confidence 9999998875
No 28
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-39 Score=366.98 Aligned_cols=265 Identities=28% Similarity=0.441 Sum_probs=216.4
Q ss_pred CCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 670 CPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
...+.||+|+||+||+|+.. +...||||.++.........+|++|++.+..++|||||+++|+|...+-.++|+
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF 568 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF 568 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence 34678999999999999853 245599999988877778899999999999999999999999999999999999
Q ss_pred ecccCcccccccccccCc----------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEc
Q 042568 744 PLMSNGSLENHLYPSHGL----------SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVA 813 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~----------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~ 813 (983)
|||..|+|.++|...... ..+++..+.+.||.|||.|++||-++. +|||||-..|+|+.++..|||+
T Consensus 569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEEec
Confidence 999999999998643221 234889999999999999999999985 9999999999999999999999
Q ss_pred cccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCC
Q 042568 814 DFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGS 892 (983)
Q Consensus 814 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~ 892 (983)
|||+++.....+.. ...+.-.=..+|||||.+..+++++++|||||||++||+++ |+.||.+..+
T Consensus 646 DfGLsRdiYssDYY-----------k~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn--- 711 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYY-----------KVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN--- 711 (774)
T ss_pred ccccchhhhhhhhh-----------cccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch---
Confidence 99999866533322 11111233578999999999999999999999999999999 9999865422
Q ss_pred chHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhcCCC
Q 042568 893 SLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYLSSP 972 (983)
Q Consensus 893 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 972 (983)
+++++....+.. + ...+.|+.++.+||.+||+.+|++||+++||-..|+...+....-
T Consensus 712 --------------~EVIe~i~~g~l---L-----~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~ 769 (774)
T KOG1026|consen 712 --------------QEVIECIRAGQL---L-----SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKY 769 (774)
T ss_pred --------------HHHHHHHHcCCc---c-----cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccc
Confidence 222322221111 1 112568899999999999999999999999999999887665543
Q ss_pred c
Q 042568 973 S 973 (983)
Q Consensus 973 ~ 973 (983)
+
T Consensus 770 ~ 770 (774)
T KOG1026|consen 770 S 770 (774)
T ss_pred c
Confidence 3
No 29
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6e-40 Score=350.98 Aligned_cols=370 Identities=25% Similarity=0.270 Sum_probs=300.0
Q ss_pred CCCEEeccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccce
Q 042568 126 RLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRF 205 (983)
Q Consensus 126 ~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~ 205 (983)
.-+.||+|+|+|+...+..|.+|++|++++|..|.++ .||.... ...+|+.
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~----------------------------~sghl~~ 129 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGH----------------------------ESGHLEK 129 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccc----------------------------cccceeE
Confidence 4567999999999999999999999999999999998 7776432 4456888
Q ss_pred eecccCccccccchhhhccCCcceecccccccccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCcc
Q 042568 206 LLLWSNRLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQ 285 (983)
Q Consensus 206 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~ 285 (983)
|+|.+|.|+.+-.+.+..++.|+.||||.|.|+ .+|...|..-.++++|+|++|.|+.+.
T Consensus 130 L~L~~N~I~sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~------------------- 189 (873)
T KOG4194|consen 130 LDLRHNLISSVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLE------------------- 189 (873)
T ss_pred EeeeccccccccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccc-------------------
Confidence 888889888888888999999999999999998 788766666666777777777665543
Q ss_pred EEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCC
Q 042568 286 ELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNN 365 (983)
Q Consensus 286 ~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 365 (983)
...|..+. +|.+|.|+.|+++...+..|.++++|+.|+|..|+|.-.---.|.++++|+.|.|..|
T Consensus 190 -------------~~~F~~ln-sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN 255 (873)
T KOG4194|consen 190 -------------TGHFDSLN-SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRN 255 (873)
T ss_pred -------------cccccccc-hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhc
Confidence 23333332 5666666666666444556666888888888888877333456788888888888888
Q ss_pred cccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCc
Q 042568 366 SLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPS 445 (983)
Q Consensus 366 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 445 (983)
.|...-...|..+.+++.|+|+.|+++..-..++.+|++|+.|+|++|.|...-+++....++|+.|+|++|+|+...+.
T Consensus 256 ~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~ 335 (873)
T KOG4194|consen 256 DISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEG 335 (873)
T ss_pred CcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChh
Confidence 88887778888888888888888888877778888889999999999988888888888888899999999999888888
Q ss_pred cccCCCccceeccccCCCCCCCCccccccccccccccccccccccCCCc---ccccccccceEEeCCCcccccccccccC
Q 042568 446 DVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPP---QLGSCIALESLNLSGNSLEGLLPVSVGQ 522 (983)
Q Consensus 446 ~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 522 (983)
.|..+..|+. |+|++|+++..--..|..+++|+.|||++|.|+..|.+ .|..+++|+.|.|.+|+|..+....|..
T Consensus 336 sf~~L~~Le~-LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsg 414 (873)
T KOG4194|consen 336 SFRVLSQLEE-LNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSG 414 (873)
T ss_pred HHHHHHHhhh-hcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhcc
Confidence 8888888886 99999999887778888999999999999999876644 4677889999999999999766678999
Q ss_pred CCCccEEecCCccccCCcCccccCCCCcceEeccCCcc
Q 042568 523 LPYLKQFDVSSNRLFGEIPQSFQASPTLKQLNFSFNKF 560 (983)
Q Consensus 523 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l 560 (983)
+..|+.|||.+|.|-..-|..|..+ .|+.|-++.-.|
T Consensus 415 l~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssf 451 (873)
T KOG4194|consen 415 LEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSF 451 (873)
T ss_pred CcccceecCCCCcceeecccccccc-hhhhhhhcccce
Confidence 9999999999999988888999988 888887765544
No 30
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=341.94 Aligned_cols=267 Identities=19% Similarity=0.246 Sum_probs=207.3
Q ss_pred HhCCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
..++|+.+.+||+|+||.||.|+ ..+|..+|+|++++... ....+..+.|-.+|....+|.||+++..|++.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 45689999999999999999999 45789999999977642 2356788899999999999999999999999999999
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
||||++||++..+|.. ...+++..+..++.+++-|++.+|+.| ||||||||+|+|+|+.|++||+|||++.-+
T Consensus 219 iMEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchh
Confidence 9999999999999975 456999999999999999999999997 999999999999999999999999999654
Q ss_pred cCCccc------------ccc--cCCCCc----cc----------------cccCccccccccccccccCCCCCCccchh
Q 042568 822 KGIDES------------VNC--ANDSMS----FT----------------STDGLLCGSVGYIAPEYGMGKRASTHGDV 867 (983)
Q Consensus 822 ~~~~~~------------~~~--~~~~~~----~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv 867 (983)
...... ... ..+... .. ......+|||.|||||++.+..|+..+|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 321110 000 000000 00 00112579999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCC
Q 042568 868 YSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQY 947 (983)
Q Consensus 868 ~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 947 (983)
||+|||+|||+.|.+||....+ .+...+.+.....-..| ...++..+..+||.+|+.
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp-----------------~~T~rkI~nwr~~l~fP-----~~~~~s~eA~DLI~rll~- 428 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETP-----------------QETYRKIVNWRETLKFP-----EEVDLSDEAKDLITRLLC- 428 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCH-----------------HHHHHHHHHHhhhccCC-----CcCcccHHHHHHHHHHhc-
Confidence 9999999999999999964211 12222222111111111 112355889999999999
Q ss_pred CCCCCCC---HHHHHHH
Q 042568 948 NPSTRPS---MLDVAHE 961 (983)
Q Consensus 948 dP~~RPs---~~evl~~ 961 (983)
||++|.- ++||.+|
T Consensus 429 d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 429 DPENRLGSKGAEEIKKH 445 (550)
T ss_pred CHHHhcCcccHHHHhcC
Confidence 9999964 7777653
No 31
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=339.79 Aligned_cols=249 Identities=26% Similarity=0.404 Sum_probs=208.7
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
.|+..+.||+|.||.||||.+ .+++.||+|+++.+..++..+.+.+|+.++.+++++||.++|+.|......+++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 466778999999999999995 5788899999999888888899999999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
.||++.+.+... ..+++..+.-|.+++..|+.|+|.++ .+|||||+.||++..+|.+|++|||.+..+....
T Consensus 94 ~gGsv~~lL~~~----~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~- 165 (467)
T KOG0201|consen 94 GGGSVLDLLKSG----NILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV- 165 (467)
T ss_pred cCcchhhhhccC----CCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh-
Confidence 999999999753 33477788889999999999999996 9999999999999999999999999998665321
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
....+.+||+.|||||++.+..|+.|+||||||++.+||++|.+|+....+ + +
T Consensus 166 ------------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP--m------------r- 218 (467)
T KOG0201|consen 166 ------------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP--M------------R- 218 (467)
T ss_pred ------------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc--c------------e-
Confidence 223567999999999999999999999999999999999999999875432 1 1
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+....+...|+.... ...+.+.+++..|++.||+.||++++++++
T Consensus 219 -------vlflIpk~~PP~L~~---~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 219 -------VLFLIPKSAPPRLDG---DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred -------EEEeccCCCCCcccc---ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 011112222222222 244567778888999999999999999864
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=348.73 Aligned_cols=253 Identities=32% Similarity=0.472 Sum_probs=206.7
Q ss_pred HhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccC----cchhHHHHHHHHHHHhcC-CCCccceeeEEecCCc
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTT----GEITGSFKRECQILKRIR-HRNLIRIITICSKPDF 738 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 738 (983)
..++|...+.||+|+||+|+.|.. .+++.||+|+++.... ....+.+.+|+.++++++ ||||+++++++..+..
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 456889999999999999999985 4789999998765411 134567779999999999 9999999999999999
Q ss_pred eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC-CCEEEccccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED-LTALVADFGI 817 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~-~~~kl~Dfgl 817 (983)
.++||||+.+|.|.+++.. ..++.+..+.++++|++.|++|+|++| |+||||||+|||++.+ +++||+|||+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred EEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccc
Confidence 9999999999999999986 346888999999999999999999997 9999999999999999 9999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCCCC-CC-ccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR-AS-THGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
+......+ ....+.+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+.. ...
T Consensus 168 s~~~~~~~-------------~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~~~ 229 (370)
T KOG0583|consen 168 SAISPGED-------------GLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----NVP 229 (370)
T ss_pred ccccCCCC-------------CcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----cHH
Confidence 99773111 2234568999999999999977 75 8899999999999999999999741 111
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHH-HHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDV-VLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
. ...+ +.. .....|.. . ..++..++.+|+..+|.+|+++.+++++=+
T Consensus 230 ~------------l~~k-i~~-~~~~~p~~-------~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w 277 (370)
T KOG0583|consen 230 N------------LYRK-IRK-GEFKIPSY-------LLSPEARSLIEKMLVPDPSTRITLLEILEHPW 277 (370)
T ss_pred H------------HHHH-Hhc-CCccCCCC-------cCCHHHHHHHHHHcCCCcccCCCHHHHhhChh
Confidence 1 1111 111 11111211 2 678999999999999999999999995444
No 33
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-38 Score=328.84 Aligned_cols=277 Identities=27% Similarity=0.321 Sum_probs=209.7
Q ss_pred CCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHh--cCCCCccceeeEEecCC----ceeEEEe
Q 042568 671 PSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKR--IRHRNLIRIITICSKPD----FKALVLP 744 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e 744 (983)
..++||+|+||.||||.+. ++.||||++.. +..+.|..|-+|++. ++|+||++++++-...+ +.++|+|
T Consensus 214 l~eli~~Grfg~V~KaqL~-~~~VAVKifp~----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLD-NRLVAVKIFPE----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hHHHhhcCccceeehhhcc-CceeEEEecCH----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 3578999999999999987 59999999953 346788889888876 58999999999876555 8899999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhcc------CCCCeEeecCCCCCeEeCCCCCEEEcccccc
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHH------SPIKVVHCDLKPSNILLDEDLTALVADFGIA 818 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~------~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla 818 (983)
|.+.|+|.+++. .+.++|....+|+..+++||+|||+. .+++|+|||||++|||+..|+++.|+|||+|
T Consensus 289 fh~kGsL~dyL~-----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 289 FHPKGSLCDYLK-----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eccCCcHHHHHH-----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999998 56799999999999999999999963 3468999999999999999999999999999
Q ss_pred ccccCCcccccccCCCCccccccCccccccccccccccCCCC------CCccchhHHHHHHHHHHHhCCCCCCcccCCCC
Q 042568 819 KLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR------ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGS 892 (983)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~ 892 (983)
..+.+.... +.....+||.+|||||++.+.. .-.+.||||+|.|+|||++...-++....+..
T Consensus 364 l~~~p~~~~-----------~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 364 LRLEPGKPQ-----------GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred EEecCCCCC-----------cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 988754322 1122268999999999987742 22468999999999999998765532111111
Q ss_pred chHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhcC
Q 042568 893 SLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYLS 970 (983)
Q Consensus 893 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 970 (983)
.+..-..-...+.++++.+-.+.+......|..+.+. ..+..+.+.+..||+.||+.|.|+.=|.+.+.++....+
T Consensus 433 qlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h--~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH--AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred cCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC--ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 1111111111223344444434333333333333322 356778999999999999999999999999998876654
No 34
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-39 Score=308.95 Aligned_cols=254 Identities=25% Similarity=0.370 Sum_probs=211.4
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
+-++|++.+.||+|.||.||.|+.+ ++-.||+|++.++.- .....++.+|++|-..++||||+++|++|.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 3467889999999999999999954 667799999876542 2245789999999999999999999999999999999
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
++||..+|.+...+.... ..++++.....++.|+|.|+.|+|... |+||||||+|+|++.++..||+|||.+...
T Consensus 100 ilEya~~gel~k~L~~~~--~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGR--MKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEEecCCchHHHHHHhcc--cccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 999999999999998544 456888899999999999999999985 999999999999999999999999998754
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
+. ....+.+||..|.+||+..+..++..+|+|++|+..||++.|.+||+... .+..
T Consensus 175 p~---------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~et-------- 230 (281)
T KOG0580|consen 175 PS---------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSET-------- 230 (281)
T ss_pred CC---------------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHH--------
Confidence 31 33445789999999999999999999999999999999999999997532 1111
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
..+ +..... ..| +.+..+..+++.+|+..+|.+|.+..|++++-.-
T Consensus 231 --------Ykr-I~k~~~-~~p-------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 231 --------YKR-IRKVDL-KFP-------STISGGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred --------HHH-HHHccc-cCC-------cccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 111 111110 111 2356789999999999999999999999988653
No 35
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-39 Score=330.32 Aligned_cols=269 Identities=26% Similarity=0.385 Sum_probs=200.6
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCC-----ceeE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPD-----FKAL 741 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~l 741 (983)
.|...+++|.|+||.||+|+.. +++.||||+.-.+.. --.+|+++|+.+.|||||++..+|.... ...+
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 4556789999999999999955 578899998743322 2357999999999999999999885432 3358
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC-CCEEEcccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED-LTALVADFGIAKL 820 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~-~~~kl~Dfgla~~ 820 (983)
|||||+. +|.+.+......+.+++...++-+.+|+.+||+|||+.+ |+||||||+|+|+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999985 888888754444567888899999999999999999985 9999999999999966 9999999999998
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
+...+.+. .+.-|..|+|||.+.| ..|+.+.||||.|||+.||+-|++-|.+. .+...+..+++
T Consensus 176 L~~~epni--------------SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik 240 (364)
T KOG0658|consen 176 LVKGEPNI--------------SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIK 240 (364)
T ss_pred eccCCCce--------------eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHH
Confidence 87654432 3568899999999998 56999999999999999999999987531 11223333333
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccc----c-chHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYN----K-VWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..-.+. .+.+...-........|.... + .......++.+++.++++++|.+|.++.|++.+
T Consensus 241 ~lG~Pt-~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 241 VLGTPT-REDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred HhCCCC-HHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 322111 111111111111111111111 1 224467889999999999999999999999853
No 36
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-38 Score=345.31 Aligned_cols=251 Identities=27% Similarity=0.377 Sum_probs=210.2
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
+-|..++.||+|+.|.|..|++ .+|+.+|||++.+.. .......+.+|+-+|+-+.|||++++|+++....+.|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4566788999999999999995 589999999996652 2224567899999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|-|.+++-. +.++++.++.++++||+.|+.|+|..+ |+|||+||+|+|+|..+.+||+|||+|..-.+
T Consensus 92 Eyv~gGELFdylv~----kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVR----KGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EecCCchhHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 99999999999875 456899999999999999999999985 99999999999999999999999999987543
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRA-STHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
+. --.+.+|++.|.|||.+.|.+| +.++||||.|||+|.|+||+.||++ +++...
T Consensus 165 gk--------------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~L----- 220 (786)
T KOG0588|consen 165 GK--------------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVL----- 220 (786)
T ss_pred Cc--------------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHH-----
Confidence 22 2244689999999999999887 5889999999999999999999972 222222
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
+.+...+... +| ..++.++.+|+.+|+.+||+.|.|++||++|-.-
T Consensus 221 -------LlKV~~G~f~--MP-------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 221 -------LLKVQRGVFE--MP-------SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred -------HHHHHcCccc--CC-------CcCCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence 2222112111 12 3467899999999999999999999999998653
No 37
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.2e-38 Score=316.95 Aligned_cols=275 Identities=23% Similarity=0.247 Sum_probs=203.1
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcch-hHHHHHHHHHHHhcCCCCccceeeEEec--CCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEI-TGSFKRECQILKRIRHRNLIRIITICSK--PDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 742 (983)
+.|+.++.|++|+||.||+|+++ +++.||+|+++.+..++. .-...+|+.++.+.+|||||.+-.+... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 34677899999999999999954 678899999987765442 3456799999999999999999987743 4678999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
||||+. +|...+... ..++...++..+..|+++|++|||..+ |+|||+||+|+|++..|.+||+|||+|+.++
T Consensus 156 Me~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhc
Confidence 999987 777777654 467899999999999999999999997 9999999999999999999999999999887
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh-
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR- 900 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~- 900 (983)
.... .....+-|.+|+|||.+.+. .|++.+|+||+|||+.||+++++-|.+..+- ..+..++..
T Consensus 229 sp~k-------------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-dQl~~If~ll 294 (419)
T KOG0663|consen 229 SPLK-------------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-DQLDKIFKLL 294 (419)
T ss_pred CCcc-------------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-HHHHHHHHHh
Confidence 5422 12335789999999999884 6899999999999999999999876432110 111111111
Q ss_pred hCCCC-CcHHHH--HHHhhc-CCCCCccccccchHH--HHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 901 HYPHR-LDPIVE--KAIAKY-APQHMPIYYNKVWSD--VVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 901 ~~~~~-~~~~~~--~~~~~~-~~~~~~~~~~~~~~~--~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
..|.. +.+-+. +..... .........++.+.. ....-.+++...+.+||.+|.|++|.+++=
T Consensus 295 GtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 295 GTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred CCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 11110 111000 000000 000001111222222 336778899999999999999999999763
No 38
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-38 Score=312.13 Aligned_cols=237 Identities=26% Similarity=0.342 Sum_probs=199.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|+..+.+|.|+||.|..++.+ +|..+|+|++++...- +..+....|..+++.+.||.++++++.|.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 35667899999999999999965 6788999999765432 24567788999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||++||-|..+++. ..++++..++-++.||+.|++|||+.+ |++||+||+|||+|++|.+||+|||.|+.+..
T Consensus 124 eyv~GGElFS~Lrk----~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK----SGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred eccCCccHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999986 456899999999999999999999996 99999999999999999999999999998753
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.+-+.+|||.|+|||.+....+...+|.|||||++|||+.|..||....
T Consensus 197 ----------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~--------------- 245 (355)
T KOG0616|consen 197 ----------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN--------------- 245 (355)
T ss_pred ----------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC---------------
Confidence 2345799999999999999999999999999999999999999986321
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCC
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTR 952 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 952 (983)
...+.++.+.... ..|.++ ..++.+|+...++.|-.+|
T Consensus 246 --~~~iY~KI~~~~v--~fP~~f-------s~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 246 --PIQIYEKILEGKV--KFPSYF-------SSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --hHHHHHHHHhCcc--cCCccc-------CHHHHHHHHHHHhhhhHhh
Confidence 1233444333222 233333 3567788888888888888
No 39
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.4e-37 Score=342.84 Aligned_cols=265 Identities=27% Similarity=0.373 Sum_probs=202.1
Q ss_pred CCCCCCCccccCCcEeEEEEEECC-----------------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD-----------------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRI 729 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 729 (983)
++|...++||+|+||.||+|.+++ +..||+|.+..........+|.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 468888999999999999998532 236999998765444456789999999999999999999
Q ss_pred eeEEecCCceeEEEecccCcccccccccccC---------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEe
Q 042568 730 ITICSKPDFKALVLPLMSNGSLENHLYPSHG---------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVH 794 (983)
Q Consensus 730 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH 794 (983)
++++...+..++||||+++|+|.+++..... ....+++..+++++.|+++||+|||+.+ |+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 9999999999999999999999988754321 1234788999999999999999999996 999
Q ss_pred ecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHH
Q 042568 795 CDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLL 874 (983)
Q Consensus 795 ~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il 874 (983)
|||||+||+++.++.+||+|||+++.+...... ...+...++..|+|||++.+..++.++||||||+++
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 230 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYY-----------RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTL 230 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCcee-----------EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHH
Confidence 999999999999999999999999865432211 112234567899999999888899999999999999
Q ss_pred HHHHh--CCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCC
Q 042568 875 LEIVT--GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTR 952 (983)
Q Consensus 875 ~ellt--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 952 (983)
|||++ +..||.... .......+.. ........ ........++..+.+++.+||+.+|++|
T Consensus 231 ~el~~~~~~~p~~~~~--~~~~~~~~~~------------~~~~~~~~----~~~~~~~~~~~~~~~li~~cl~~~p~~R 292 (304)
T cd05096 231 WEILMLCKEQPYGELT--DEQVIENAGE------------FFRDQGRQ----VYLFRPPPCPQGLYELMLQCWSRDCRER 292 (304)
T ss_pred HHHHHccCCCCCCcCC--HHHHHHHHHH------------Hhhhcccc----ccccCCCCCCHHHHHHHHHHccCCchhC
Confidence 99997 456665321 1111111110 00000000 0000012245678999999999999999
Q ss_pred CCHHHHHHHHH
Q 042568 953 PSMLDVAHEMG 963 (983)
Q Consensus 953 Ps~~evl~~L~ 963 (983)
||+.||.+.|+
T Consensus 293 Ps~~~i~~~l~ 303 (304)
T cd05096 293 PSFSDIHAFLT 303 (304)
T ss_pred cCHHHHHHHHh
Confidence 99999998876
No 40
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-39 Score=309.60 Aligned_cols=273 Identities=22% Similarity=0.261 Sum_probs=215.2
Q ss_pred HhCCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEec-----CCc
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSK-----PDF 738 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 738 (983)
..++|++.+.+|+|||+-||.++ ..+++.+|+|++.... .+..+...+|++..++++|||+++++++... ..+
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 45689999999999999999999 6678889999997766 3467889999999999999999999998743 345
Q ss_pred eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIA 818 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla 818 (983)
.|++++|...|||.+.+.........+++.+.++|+.++++||.+||+..+ +++||||||.||++.+.+.+++.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccCc
Confidence 899999999999999998766656679999999999999999999999875 6999999999999999999999999999
Q ss_pred ccccCCcccccccCCCCccccccCccccccccccccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 819 KLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM---GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
+...-.-........-. .......|..|+|||.+. +...++++|||||||++|+|+.|..||+..+..+.++.
T Consensus 177 ~~a~i~i~~~~~a~~lQ----e~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla 252 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQ----EWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA 252 (302)
T ss_pred cccceEeechHHHHHHH----HHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE
Confidence 86542211100000000 011124788999999875 45678999999999999999999999987666555443
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
-.+... ....|.. ...+..+.+++..|++.||.+||++.+++..+..+
T Consensus 253 LAv~n~-----------------q~s~P~~-----~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 253 LAVQNA-----------------QISIPNS-----SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred Eeeecc-----------------ccccCCC-----CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 222210 0000100 11557789999999999999999999999988765
No 41
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3e-37 Score=335.73 Aligned_cols=250 Identities=22% Similarity=0.316 Sum_probs=200.7
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEec----CCceeEEEec
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSK----PDFKALVLPL 745 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 745 (983)
...||+|++|.||+|.. +|+.||||.++..... +..+.|.+|++++++++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46799999999999998 4889999998654332 235778899999999999999999999866 3467899999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++|+|.+++... ..+++....+++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 104 CTRGYLREVLDKE----KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred CCCCcHHHHHhhC----CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 9999999998753 45889999999999999999999852 37899999999999999999999999998654211
Q ss_pred ccccccCCCCccccccCccccccccccccccCC--CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG--KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
....||..|+|||++.+ ..++.++|||||||++|||++|+.||.... ..
T Consensus 178 ----------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-----~~-------- 228 (283)
T PHA02988 178 ----------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT-----TK-------- 228 (283)
T ss_pred ----------------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC-----HH--------
Confidence 12358899999999876 678999999999999999999999986421 11
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
+..+..+........+ ..++.++.+++.+||+.||++|||++|+++.|+.+..+
T Consensus 229 ----~~~~~i~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~~ 282 (283)
T PHA02988 229 ----EIYDLIINKNNSLKLP-------LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKFY 282 (283)
T ss_pred ----HHHHHHHhcCCCCCCC-------CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHhc
Confidence 1111111111111111 13567899999999999999999999999999988654
No 42
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=323.33 Aligned_cols=288 Identities=21% Similarity=0.280 Sum_probs=218.1
Q ss_pred HHHHHhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEec---
Q 042568 661 QLIEATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSK--- 735 (983)
Q Consensus 661 ~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--- 735 (983)
+..+....|...+.||+|+||.|..|.. .+|+.||||++..... ....++..+|+++++.++|+||+.+.+.+..
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 3344556677788999999999999995 4789999999864432 3356788999999999999999999999865
Q ss_pred --CCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEc
Q 042568 736 --PDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVA 813 (983)
Q Consensus 736 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~ 813 (983)
-...|+|+|+|+ .+|.+.++. ...++...+.-+.+|+++||.|+|+.+ |+|||+||+|++++.+..+||+
T Consensus 96 ~~f~DvYiV~elMe-tDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~ 167 (359)
T KOG0660|consen 96 DKFNDVYLVFELME-TDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKIC 167 (359)
T ss_pred cccceeEEehhHHh-hHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEec
Confidence 346799999995 588888874 334899999999999999999999995 9999999999999999999999
Q ss_pred cccccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCC
Q 042568 814 DFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGS 892 (983)
Q Consensus 814 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~ 892 (983)
|||+|+..... . .....+.++.|..|+|||.+.. ..|+...||||+|||+.||++|+.-|- +..
T Consensus 168 DFGLAR~~~~~-~----------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFp----G~d 232 (359)
T KOG0660|consen 168 DFGLARYLDKF-F----------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFP----GKD 232 (359)
T ss_pred cccceeecccc-C----------cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCC----CCc
Confidence 99999987643 1 1234455789999999998764 689999999999999999999998763 222
Q ss_pred chHHH--HHhhCCCCCcHH--------HHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH-
Q 042568 893 SLHEW--VKRHYPHRLDPI--------VEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE- 961 (983)
Q Consensus 893 ~l~~~--~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~- 961 (983)
.+.+. +....+..-.+. ..+.+. ..+...+..+...++......++|+.+|+..||.+|+|++|+++|
T Consensus 233 ~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~-slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 233 YVHQLQLILELLGTPSEEDLQKIRSEKARPYIK-SLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred hHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHH-hCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 22222 222222111111 112122 123333444555666778889999999999999999999999975
Q ss_pred -HHHhHhhcCCC
Q 042568 962 -MGRLKQYLSSP 972 (983)
Q Consensus 962 -L~~~~~~~~~~ 972 (983)
++...+...+|
T Consensus 312 Yl~~~hdp~dEP 323 (359)
T KOG0660|consen 312 YLAPYHDPEDEP 323 (359)
T ss_pred hhhhhcCCccCC
Confidence 44444433333
No 43
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=326.81 Aligned_cols=264 Identities=25% Similarity=0.322 Sum_probs=203.8
Q ss_pred HhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCc---------c----hhHHHHHHHHHHHhcCCCCcccee
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTG---------E----ITGSFKRECQILKRIRHRNLIRII 730 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~---------~----~~~~~~~E~~~l~~l~h~niv~l~ 730 (983)
.-+.|+..+.||+|.||.|-+|+. .+++.||||++++.... . ..++..+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 346789999999999999999995 47889999999654211 1 235789999999999999999999
Q ss_pred eEEecC--CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC
Q 042568 731 TICSKP--DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL 808 (983)
Q Consensus 731 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~ 808 (983)
.+..++ +..|||+|||..|.+...=.. ...++..++++++.+++.||+|||.++ ||||||||+|+|++++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d----~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPD----KPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCC----cccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCC
Confidence 999765 578999999998887442221 233899999999999999999999996 99999999999999999
Q ss_pred CEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCC----CCccchhHHHHHHHHHHHhCCCCC
Q 042568 809 TALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR----ASTHGDVYSFGVLLLEIVTGRRPT 884 (983)
Q Consensus 809 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~k~Dv~SlG~il~elltg~~p~ 884 (983)
++||+|||.+......... .........+|||.|+|||...++. .+.+.||||+||++|+|+.|+.||
T Consensus 248 ~VKIsDFGVs~~~~~~~~~--------~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF 319 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDE--------GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPF 319 (576)
T ss_pred cEEeeccceeeecccCCcc--------ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCc
Confidence 9999999999876433111 0111222358999999999987732 357789999999999999999998
Q ss_pred CcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 885 DVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 885 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
...+ ..+..++.+.. .+. .+...++..++.+|+.+++..||+.|.+..+|..|.+.
T Consensus 320 ~~~~-----------------~~~l~~KIvn~----pL~---fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 320 FDDF-----------------ELELFDKIVND----PLE---FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred ccch-----------------HHHHHHHHhcC----ccc---CCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 5321 11222222211 111 11123466789999999999999999999999998875
Q ss_pred hHh
Q 042568 965 LKQ 967 (983)
Q Consensus 965 ~~~ 967 (983)
-..
T Consensus 376 t~~ 378 (576)
T KOG0585|consen 376 TRD 378 (576)
T ss_pred ccC
Confidence 543
No 44
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.7e-37 Score=342.48 Aligned_cols=272 Identities=22% Similarity=0.282 Sum_probs=208.3
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
.++|+..+.||+|+||.||+++.. ++..||+|.+..........++.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367888999999999999999965 6788999998765544556789999999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++|+|.+++.. ...+++..+..++.|+++||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 9999999998864 245889999999999999999999864 4999999999999999999999999998755321
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC-
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP- 903 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~- 903 (983)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+...+.....
T Consensus 158 ~---------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~--~~~~~~~~~~~~~~ 220 (331)
T cd06649 158 M---------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPD--AKELEAIFGRPVVD 220 (331)
T ss_pred c---------------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHhcccccc
Confidence 1 122468999999999999999999999999999999999999985321 1111111110000
Q ss_pred --------------------------CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHH
Q 042568 904 --------------------------HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLD 957 (983)
Q Consensus 904 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 957 (983)
...................+... ......++.+++.+||+.||++|||++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~L~~~P~~Rpt~~e 297 (331)
T cd06649 221 GEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP---NGVFTPDFQEFVNKCLIKNPAERADLKM 297 (331)
T ss_pred cccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCC---CccccHHHHHHHHHHccCCcccCCCHHH
Confidence 00000000111111110001000 0124567999999999999999999999
Q ss_pred HHHHHH
Q 042568 958 VAHEMG 963 (983)
Q Consensus 958 vl~~L~ 963 (983)
++++-.
T Consensus 298 ll~h~~ 303 (331)
T cd06649 298 LMNHTF 303 (331)
T ss_pred HhcChH
Confidence 998764
No 45
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=351.36 Aligned_cols=259 Identities=29% Similarity=0.458 Sum_probs=215.0
Q ss_pred CCCCccccCCcEeEEEEEECC-C---cEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 670 CPSSLIGSGRFGHVYKGVLQD-N---TRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~~-~---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.+.++||.|.||.||+|+++- | ..||||.++....++.+..|..|+.||.++.||||+++.|+.....-..||+||
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 356889999999999999752 3 459999999888888889999999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
|++|+|+.+|.... .++.+.+...+.++||.|+.||-+.+ +|||||.+.|||++.+..+|++|||+++.+.++.
T Consensus 712 MENGsLDsFLR~~D---GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 712 MENGSLDSFLRQND---GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhCCcHHHHHhhcC---CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 99999999998764 45999999999999999999999996 9999999999999999999999999999876543
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
... +.+..+ .=..+|.|||.+..++++..+||||||+++||.++ |.+||..+.+
T Consensus 786 ~~~--------ytt~GG--KIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--------------- 840 (996)
T KOG0196|consen 786 EAA--------YTTLGG--KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------------- 840 (996)
T ss_pred Ccc--------ccccCC--ccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch---------------
Confidence 111 011111 12368999999999999999999999999999887 9999865422
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhc
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYL 969 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 969 (983)
++ +-+.+.... ++|+. .+|+..|.+||+.||++|-.+||.+.|++.+|.++....
T Consensus 841 --Qd-VIkaIe~gy--RLPpP-----mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 841 --QD-VIKAIEQGY--RLPPP-----MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred --HH-HHHHHHhcc--CCCCC-----CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 11 222222222 23332 358999999999999999999999999999999875433
No 46
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-38 Score=323.01 Aligned_cols=248 Identities=25% Similarity=0.341 Sum_probs=208.8
Q ss_pred CCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 668 GFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
+|++.+.+|+|+||.|-+|. +..|+.||||.+.+...+ ...-.+.+|++||..++||||+.+|.+|...+...+|||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 56677899999999999999 578999999999766433 345678999999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|..+|.|.+++.. ...+++.+++++++||++|+.|+|.++ ++|||+|.+|||+|+++++||+|||++-.+.+.
T Consensus 134 YaS~GeLYDYiSe----r~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 134 YASGGELYDYISE----RGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred ecCCccHHHHHHH----hccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 9999999999986 456999999999999999999999995 999999999999999999999999999877542
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRA-STHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
...++++|++-|.+||.+.|.+| ++.+|-||+||++|.++.|..||+.. +...++.+...
T Consensus 207 --------------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~lvrQIs~ 267 (668)
T KOG0611|consen 207 --------------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKRLVRQISR 267 (668)
T ss_pred --------------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHHHHHHhhc
Confidence 23356799999999999999988 58899999999999999999999743 22222322111
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+.+.. ++.+....-||.+|+.++|++|.|+.+|..|.+
T Consensus 268 ------------GaYrE----------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 268 ------------GAYRE----------PETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred ------------ccccC----------CCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 11110 123345677889999999999999999999876
No 47
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.5e-37 Score=346.66 Aligned_cols=262 Identities=24% Similarity=0.399 Sum_probs=204.8
Q ss_pred CCCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFK 739 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 739 (983)
++|...+.||+|+||.||+|... ++..||||+++.....+....+.+|+++++.+ +|+||++++++|...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 46778999999999999999842 23579999997655444567789999999999 899999999999999999
Q ss_pred eEEEecccCcccccccccccC-----------------------------------------------------------
Q 042568 740 ALVLPLMSNGSLENHLYPSHG----------------------------------------------------------- 760 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 760 (983)
++||||+++|+|.+++.....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 999999999999988753210
Q ss_pred -------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCC
Q 042568 761 -------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCAND 833 (983)
Q Consensus 761 -------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 833 (983)
...++++..+++++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++........
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~------ 268 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY------ 268 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcce------
Confidence 1134788999999999999999999986 999999999999999999999999999765422110
Q ss_pred CCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcHHHHH
Q 042568 834 SMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEK 912 (983)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 912 (983)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||.....+. .....
T Consensus 269 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~--------------- 327 (374)
T cd05106 269 -----VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKM--------------- 327 (374)
T ss_pred -----eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHH---------------
Confidence 11122345678999999998899999999999999999997 999986432111 11111
Q ss_pred HHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 913 AIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
+........+ ...+.++.+++.+||+.||++|||+.++++.|+++.
T Consensus 328 -~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 328 -VKRGYQMSRP-------DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -HHcccCccCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1110110011 113467899999999999999999999999998863
No 48
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7.4e-37 Score=346.02 Aligned_cols=261 Identities=23% Similarity=0.351 Sum_probs=203.8
Q ss_pred CCCCCCCccccCCcEeEEEEEE------CCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL------QDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFK 739 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 739 (983)
++|+..+.||+|+||.||+|.+ .++..||||+++........+.+.+|+++++.+ +||||++++++|...+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4677889999999999999974 235679999997554444457789999999999 899999999999999999
Q ss_pred eEEEecccCcccccccccccC-----------------------------------------------------------
Q 042568 740 ALVLPLMSNGSLENHLYPSHG----------------------------------------------------------- 760 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 760 (983)
++||||+++|+|.+++.....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 999999999999888754221
Q ss_pred ------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 761 ------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 761 ------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
....+++..+.+++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~- 270 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY- 270 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc-
Confidence 0124789999999999999999999986 999999999999999999999999999865432111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
...+...++..|+|||.+.+..++.++|||||||++|||++ |..||.....+ .....++..
T Consensus 271 ----------~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~------- 332 (375)
T cd05104 271 ----------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKE------- 332 (375)
T ss_pred ----------cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHh-------
Confidence 11122345678999999999999999999999999999998 88888643211 111111111
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
......+ ...+.++.+++.+|++.||++||++.|+++.|++.
T Consensus 333 ---------~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 333 ---------GYRMLSP-------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ---------CccCCCC-------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0000001 11346789999999999999999999999999863
No 49
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-37 Score=339.01 Aligned_cols=243 Identities=23% Similarity=0.345 Sum_probs=203.9
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 741 (983)
-++|...++||+|.||+|+++..+ +++.+|||++++.. ..+..+..+.|.+|+... +||.++.++..|...++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 357888999999999999999965 67889999998764 344678889999998887 59999999999999999999
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
||||+.||++..+.+ ...+++..+.-++..|+.||.|||+++ ||+||||.+|||+|.+|.+||+|||+++..
T Consensus 447 vmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999655554 456999999999999999999999996 999999999999999999999999999843
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
. .....+.+++||+.|||||++.+..|+..+|.|||||++|||+.|+.||....+
T Consensus 519 m-------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE------------ 573 (694)
T KOG0694|consen 519 M-------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE------------ 573 (694)
T ss_pred C-------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH------------
Confidence 2 223455678999999999999999999999999999999999999999863211
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM 955 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 955 (983)
++++|..+..... .| -.++.+.+.++.+++..+|++|.-+
T Consensus 574 -----ee~FdsI~~d~~~--yP-------~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 574 -----EEVFDSIVNDEVR--YP-------RFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -----HHHHHHHhcCCCC--CC-------CcccHHHHHHHHHHhccCcccccCC
Confidence 2334443322221 11 1256889999999999999999866
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1e-36 Score=332.42 Aligned_cols=253 Identities=23% Similarity=0.319 Sum_probs=200.7
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
.|...+.||+|+||.||+|.. .+++.||||.+..... ......+.+|++++++++|++|+++++++...+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 366788999999999999995 5789999999865432 1234567889999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++|+|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 81 IMNGGDLKFHIYNMG--NPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred ecCCCcHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 999999988775432 346899999999999999999999996 999999999999999999999999999865321
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
.. .....||..|+|||++.+..++.++||||+||++|||++|+.||...... ..
T Consensus 156 ~~--------------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~---------- 209 (285)
T cd05631 156 ET--------------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER--VK---------- 209 (285)
T ss_pred Ce--------------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc--hh----------
Confidence 11 11246899999999999999999999999999999999999998642111 00
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS-----MLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 961 (983)
...+...+..... . ...+...++.+++.+|++.||++||+ +++++++
T Consensus 210 --~~~~~~~~~~~~~-~-------~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 210 --REEVDRRVKEDQE-E-------YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred --HHHHHHHhhcccc-c-------CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 0111111111100 0 01224567889999999999999997 8888875
No 51
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.7e-37 Score=335.45 Aligned_cols=247 Identities=25% Similarity=0.312 Sum_probs=201.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|...+.||+|+||.||+|... +++.||+|++..... .+..+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999965 688999999865432 123567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.. ...+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999998864 345889999999999999999999996 99999999999999999999999999876532
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
. .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ...
T Consensus 154 ~----------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-----~~~------- 205 (291)
T cd05612 154 R----------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN-----PFG------- 205 (291)
T ss_pred C----------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHH-------
Confidence 1 112468999999999999889999999999999999999999986321 111
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS-----MLDVAHEM 962 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~L 962 (983)
..+....... ..+ ......+.+++.+|++.||.+||+ ++|++++-
T Consensus 206 -----~~~~i~~~~~--~~~-------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 206 -----IYEKILAGKL--EFP-------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred -----HHHHHHhCCc--CCC-------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 1111111100 011 112457889999999999999995 89998774
No 52
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.9e-36 Score=327.02 Aligned_cols=256 Identities=23% Similarity=0.341 Sum_probs=203.6
Q ss_pred CCCCCCCccccCCcEeEEEEEEC----CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ----DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
++|.+.+.||+|+||.||+|.+. .+..||+|.++..........+.+|+.++++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45778899999999999999853 35679999997665444557899999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++|+|.+++... ...+++..++.++.|++.|++|||+.+ ++||||||+||+++.++.++++|||.+....
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 85 TEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999998753 246899999999999999999999986 9999999999999999999999999876432
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~ 901 (983)
.... .......++..|+|||.+.+..++.++|||||||++||+++ |+.||..... .+
T Consensus 159 ~~~~------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~-----~~----- 216 (266)
T cd05064 159 SEAI------------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG-----QD----- 216 (266)
T ss_pred ccch------------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH-----HH-----
Confidence 1100 01111245678999999999999999999999999999775 9999864211 01
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
..+. +...... + ....++..+.+++.+||+.+|++||+++|+.+.|+++
T Consensus 217 -------~~~~-~~~~~~~--~-----~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 217 -------VIKA-VEDGFRL--P-----APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -------HHHH-HHCCCCC--C-----CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 1111 1111110 1 0123567789999999999999999999999998765
No 53
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.7e-36 Score=334.06 Aligned_cols=275 Identities=21% Similarity=0.314 Sum_probs=200.3
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
.++|.+.+.||+|+||.||+|... +++.||||++...........+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467899999999999999999965 6889999998765444445677899999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|++ +++.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 996 5776666543 345888999999999999999999996 999999999999999999999999998754321
Q ss_pred cccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
. .......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.........+.......-.
T Consensus 157 ~-------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 223 (303)
T cd07869 157 S-------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGT 223 (303)
T ss_pred C-------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCC
Confidence 1 11122468999999998875 457889999999999999999999996432111111111111000
Q ss_pred CC--CcHHHHHHHhhcCCCCC----ccccccchH--HHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HR--LDPIVEKAIAKYAPQHM----PIYYNKVWS--DVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.. ...... ......+... +......|. .....+.+++.+|++.||++|||++|+++|
T Consensus 224 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 224 PNEDTWPGVH-SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred CChhhccchh-hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00 000000 0000000000 000000111 123567899999999999999999999975
No 54
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-37 Score=303.09 Aligned_cols=258 Identities=26% Similarity=0.397 Sum_probs=211.5
Q ss_pred HHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-------chhHHHHHHHHHHHhc-CCCCccceeeEEe
Q 042568 664 EATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-------EITGSFKRECQILKRI-RHRNLIRIITICS 734 (983)
Q Consensus 664 ~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 734 (983)
..-+.|...+.+|.|..++|.++.++ +|..+|+|++...... +..+.-.+|+.|++++ .||+|+++.++|.
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 34456788899999999999998854 6888999998544322 2345566799999998 6999999999999
Q ss_pred cCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcc
Q 042568 735 KPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVAD 814 (983)
Q Consensus 735 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~D 814 (983)
.+.+.++|+|.|+.|-|.|++.. ...+++...++|++|+.+|+.|||... |||||+||+|||+|++.++||+|
T Consensus 94 s~sF~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEec
Confidence 99999999999999999999975 456899999999999999999999994 99999999999999999999999
Q ss_pred ccccccccCCcccccccCCCCccccccCccccccccccccccCC------CCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 042568 815 FGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG------KRASTHGDVYSFGVLLLEIVTGRRPTDVLF 888 (983)
Q Consensus 815 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~Dv~SlG~il~elltg~~p~~~~~ 888 (983)
||.|+.+.+.+.. ...+|||+|+|||.+.. ..|+..+|.|+.|||+|.++.|.+||...
T Consensus 167 FGFa~~l~~GekL--------------relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR- 231 (411)
T KOG0599|consen 167 FGFACQLEPGEKL--------------RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR- 231 (411)
T ss_pred cceeeccCCchhH--------------HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH-
Confidence 9999988765432 23689999999998753 46788999999999999999999998421
Q ss_pred CCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 889 HDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 889 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
. +-+.-+.+..... ....+.|.+...+..+|+.+|++.||++|.|++|+++|=.-
T Consensus 232 --k---------------QmlMLR~ImeGky----qF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 232 --K---------------QMLMLRMIMEGKY----QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred --H---------------HHHHHHHHHhccc----ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 0 1112222222221 12344688999999999999999999999999999986543
No 55
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.2e-36 Score=332.48 Aligned_cols=273 Identities=21% Similarity=0.261 Sum_probs=200.4
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|...++||+|+||.||+|... +++.||+|.++..........+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888999999999999999965 68889999987654444456788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++ +|.+++... ...+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LDS-DLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 985 888877543 335788999999999999999999996 9999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ...+.... .....
T Consensus 158 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~-~~~~~ 222 (288)
T cd07871 158 K-------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTV-KEELHLIF-RLLGT 222 (288)
T ss_pred c-------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH-HHhCC
Confidence 1 1122468999999998876 5688999999999999999999999864211 11111111 11111
Q ss_pred CCcHHHHH------HHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEK------AIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...+.... ......+...+............++.+++.+|++.||.+|||++|+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 223 PTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred CChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 0000000000000000011234678899999999999999999999865
No 56
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.9e-37 Score=315.83 Aligned_cols=278 Identities=25% Similarity=0.346 Sum_probs=203.8
Q ss_pred CCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcc-hhHHHHHHHHHHHhcCCCC-ccceeeEEecCC------ce
Q 042568 669 FCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGE-ITGSFKRECQILKRIRHRN-LIRIITICSKPD------FK 739 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------~~ 739 (983)
|...++||+|+||+||+|+. .+|+.||+|++......+ ......+|+.++++++|+| |+.+++++.... ..
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence 44567799999999999994 478899999997765532 4566789999999999999 999999998777 77
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++|+||++. +|.+++.........++...+..+++|+++||+|||+++ |+||||||+|||+++.|.+||+|||+|+
T Consensus 93 ~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 93 YLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred EEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchHH
Confidence 899999975 888888765432246777899999999999999999996 9999999999999999999999999999
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
...-... .....++|..|+|||++.+. .|+..+||||+|||++||++++.-|....+ -..+....
T Consensus 169 a~~ip~~-------------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If 234 (323)
T KOG0594|consen 169 AFSIPMR-------------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIF 234 (323)
T ss_pred HhcCCcc-------------cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHH
Confidence 6552221 12335799999999999986 789999999999999999999887754322 11111111
Q ss_pred Hh-hCCC-CCcHHHHHHHhhcC---CCCC-ccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH--HHHh
Q 042568 899 KR-HYPH-RLDPIVEKAIAKYA---PQHM-PIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE--MGRL 965 (983)
Q Consensus 899 ~~-~~~~-~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~ 965 (983)
.. ..|. ...+-+.. ..... .... +.......+.......+++.+|++++|.+|.|++.+++| +..+
T Consensus 235 ~~lGtP~e~~Wp~v~~-~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 235 RLLGTPNEKDWPGVSS-LPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred HHcCCCCccCCCCccc-cccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 11 0011 11111110 00000 0000 111111112223478999999999999999999999987 5444
No 57
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-37 Score=332.65 Aligned_cols=252 Identities=23% Similarity=0.325 Sum_probs=212.5
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcc-hhHHHHHHHHHHHhcCCCCccceeeEEecCCc-eeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGE-ITGSFKRECQILKRIRHRNLIRIITICSKPDF-KALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 743 (983)
++|...+++|+|+||.++.++++ ++..||+|.+......+ ......+|+.++++++|||||.+.+.|...+. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56788899999999999999865 56789999987665332 34578899999999999999999999988887 89999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
+|++||++.+.+...+ ..-++++.+.+|+.|++.|+.|||+. +|+|||||++||+++++..++|+|||+|+.+..
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999998765 45689999999999999999999987 499999999999999999999999999999875
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. ....+++||+.||+||...+.+|..|+||||+||++|||++-+++|+.. +
T Consensus 159 ~~-------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-----~---------- 210 (426)
T KOG0589|consen 159 ED-------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-----N---------- 210 (426)
T ss_pred ch-------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-----c----------
Confidence 43 1234578999999999999999999999999999999999999998642 2
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+.+.+....... ..| .....++..++..|++.+|+.||++.+++.+
T Consensus 211 --m~~Li~ki~~~~~~-Plp-------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 211 --MSELILKINRGLYS-PLP-------SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --hHHHHHHHhhccCC-CCC-------ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 23333333333211 122 2356789999999999999999999999986
No 58
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.1e-37 Score=339.31 Aligned_cols=243 Identities=23% Similarity=0.291 Sum_probs=196.0
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCc
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
+.||+|+||.||+|+.. +|+.||||+++... ......++.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999964 68899999987543 2233467888999999999999999999999999999999999999
Q ss_pred ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccc
Q 042568 750 SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVN 829 (983)
Q Consensus 750 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~ 829 (983)
+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---- 149 (323)
T cd05571 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---- 149 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC----
Confidence 99888864 346899999999999999999999996 9999999999999999999999999987532111
Q ss_pred ccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHH
Q 042568 830 CANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPI 909 (983)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 909 (983)
.......||+.|+|||.+.+..++.++||||+||++|||++|+.||.... ... .
T Consensus 150 ---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~------------~ 203 (323)
T cd05571 150 ---------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEK------------L 203 (323)
T ss_pred ---------CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC-----HHH------------H
Confidence 11223579999999999999999999999999999999999999985311 111 1
Q ss_pred HHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 910 VEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
....... ....+ .....++.+++.+|++.||++|| ++.+++++
T Consensus 204 ~~~~~~~--~~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 204 FELILME--EIRFP-------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHcC--CCCCC-------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 1111111 00111 12456788999999999999999 89999865
No 59
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.5e-36 Score=328.41 Aligned_cols=258 Identities=26% Similarity=0.454 Sum_probs=205.6
Q ss_pred CCCCCCccccCCcEeEEEEEECCC------cEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDN------TRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~------~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
+|...+.||+|+||.||+|..... ..||+|.+..........+|.+|++++++++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 577789999999999999986432 46999998755554556789999999999999999999999998889999
Q ss_pred EEecccCcccccccccccC------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCC
Q 042568 742 VLPLMSNGSLENHLYPSHG------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLT 809 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~ 809 (983)
+|||+++++|.+++..... ....+++..++.++.|+++||+|||+.+ ++||||||+||++++++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCc
Confidence 9999999999998865321 1146889999999999999999999996 999999999999999999
Q ss_pred EEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccc
Q 042568 810 ALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLF 888 (983)
Q Consensus 810 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~ 888 (983)
++|+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 163 ~~L~dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05048 163 VKISDFGLSRDIYSADYY-----------RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS 231 (283)
T ss_pred EEECCCcceeeccccccc-----------cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999765322111 11122357889999999988889999999999999999998 999986421
Q ss_pred CCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 889 HDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 889 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
. .+ ..+. +........ ...++.++.+++.+||+.+|.+||++.||+++|+.
T Consensus 232 ~-----~~------------~~~~-i~~~~~~~~-------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 232 N-----QE------------VIEM-IRSRQLLPC-------PEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred H-----HH------------HHHH-HHcCCcCCC-------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1 11 1111 111010000 12356789999999999999999999999999975
No 60
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.9e-36 Score=336.23 Aligned_cols=263 Identities=27% Similarity=0.398 Sum_probs=204.4
Q ss_pred CCCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecC-Cc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKP-DF 738 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 738 (983)
++|.+.+.||+|+||.||+|... +++.||+|+++..........+.+|+++++++ +|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46888999999999999999632 24679999987554444456788899999999 899999999988654 46
Q ss_pred eeEEEecccCcccccccccccC---------------------------------------------------------c
Q 042568 739 KALVLPLMSNGSLENHLYPSHG---------------------------------------------------------L 761 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------~ 761 (983)
.++++||+++++|.+++..... .
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 7899999999999988753211 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCcccccc
Q 042568 762 SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTD 841 (983)
Q Consensus 762 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~ 841 (983)
...+++..+..++.||++||+|||+.+ |+||||||+||++++++.++|+|||+++.+...... ...
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~-----------~~~ 232 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-----------VRK 232 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcch-----------hhc
Confidence 136899999999999999999999986 999999999999999999999999999876432211 112
Q ss_pred CccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCC
Q 042568 842 GLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQ 920 (983)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (983)
....++..|+|||++.+..++.++|||||||++|||++ |+.||.....+ +.....+......
T Consensus 233 ~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-----------------~~~~~~~~~~~~~ 295 (337)
T cd05054 233 GDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID-----------------EEFCRRLKEGTRM 295 (337)
T ss_pred cCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc-----------------HHHHHHHhccCCC
Confidence 23456788999999999999999999999999999998 99998542111 1111111111110
Q ss_pred CCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHh
Q 042568 921 HMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQ 967 (983)
Q Consensus 921 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 967 (983)
..+ .....++.+++.+|++.+|++||++.|++++|+++.+
T Consensus 296 ~~~-------~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 296 RAP-------EYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CCC-------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011 1234678999999999999999999999999998865
No 61
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.9e-36 Score=334.16 Aligned_cols=271 Identities=22% Similarity=0.283 Sum_probs=205.3
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
.++|+..++||+|+||.||+|.+. ++..+|+|.+..........++.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367889999999999999999976 6788999998765444456789999999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++|+|.+++.. ...+++..+..++.|+++|++|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999864 235788999999999999999999753 4999999999999999999999999998755321
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. .....||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+...+......
T Consensus 158 ~---------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~ 220 (333)
T cd06650 158 M---------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA--KELELMFGCPVEG 220 (333)
T ss_pred c---------------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcch--hHHHHHhcCcccC
Confidence 1 1224689999999999998899999999999999999999999864211 1111111000000
Q ss_pred C-------------------------CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 042568 905 R-------------------------LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVA 959 (983)
Q Consensus 905 ~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 959 (983)
. .................+.... .....++.+++.+||+.||++|||++|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~~P~~Rpt~~ell 297 (333)
T cd06650 221 DPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS---GVFGAEFQDFVNKCLIKNPAERADLKQLM 297 (333)
T ss_pred CccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCC---CCcCHHHHHHHHHhccCCcccCcCHHHHh
Confidence 0 0000000000000000000000 11346789999999999999999999998
Q ss_pred HHH
Q 042568 960 HEM 962 (983)
Q Consensus 960 ~~L 962 (983)
++-
T Consensus 298 ~h~ 300 (333)
T cd06650 298 VHA 300 (333)
T ss_pred hCH
Confidence 764
No 62
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.8e-36 Score=341.76 Aligned_cols=264 Identities=26% Similarity=0.395 Sum_probs=206.8
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCc
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKPDF 738 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 738 (983)
.++|.+.++||+|+||.||+|... .+..||||+++........+.+.+|+++++++. ||||++++++|...+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 457888999999999999999853 134699999976554445678999999999996 9999999999999999
Q ss_pred eeEEEecccCcccccccccccC----------------------------------------------------------
Q 042568 739 KALVLPLMSNGSLENHLYPSHG---------------------------------------------------------- 760 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 760 (983)
.++||||+++|+|.+++.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999888754210
Q ss_pred ----------------------------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC
Q 042568 761 ----------------------------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE 806 (983)
Q Consensus 761 ----------------------------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~ 806 (983)
....+++..+..++.|+++||+|||+.+ |+||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeC
Confidence 0124788899999999999999999986 999999999999999
Q ss_pred CCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 042568 807 DLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTD 885 (983)
Q Consensus 807 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~ 885 (983)
++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |+.||.
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~ 341 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNY-----------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP 341 (400)
T ss_pred CCEEEEEeCCcceeccccccc-----------cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCc
Confidence 999999999999865432111 11122357788999999999899999999999999999997 999986
Q ss_pred cccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 886 VLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 886 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
....+. .+...+........ ...++.++.+++.+||+.+|++||++.+|.++|+++
T Consensus 342 ~~~~~~-----------------~~~~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 342 GMIVDS-----------------TFYNKIKSGYRMAK-------PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred ccchhH-----------------HHHHHHhcCCCCCC-------CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 421110 01111111110000 123557889999999999999999999999999986
Q ss_pred Hh
Q 042568 966 KQ 967 (983)
Q Consensus 966 ~~ 967 (983)
.+
T Consensus 398 ~~ 399 (400)
T cd05105 398 LP 399 (400)
T ss_pred cC
Confidence 43
No 63
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-37 Score=337.28 Aligned_cols=258 Identities=26% Similarity=0.408 Sum_probs=207.8
Q ss_pred CCCccccCCcEeEEEEEECC--C--cE-EEEEEeec--ccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 671 PSSLIGSGRFGHVYKGVLQD--N--TR-IAVKVLDL--TTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~~~--~--~~-vAvK~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
..++||+|+||.||+|.+.. + .. ||||..+. ....+...+|.+|+++|++++|||||++||++....-.++||
T Consensus 161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivm 240 (474)
T KOG0194|consen 161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVM 240 (474)
T ss_pred ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEE
Confidence 35899999999999999653 2 23 89999875 234556789999999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
|+|+||+|++++.+.. ..++..++..++.++|.||+|||++. ++||||-+.|+|++.++.+||+|||+++.-..
T Consensus 241 El~~gGsL~~~L~k~~---~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~ 314 (474)
T KOG0194|consen 241 ELCNGGSLDDYLKKNK---KSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ 314 (474)
T ss_pred EecCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccCCcc
Confidence 9999999999998653 36999999999999999999999995 99999999999999999999999999875431
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.. .......-...|+|||.+....+++++|||||||++||+++ |..||.....
T Consensus 315 ~~-------------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~------------- 368 (474)
T KOG0194|consen 315 YV-------------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN------------- 368 (474)
T ss_pred ee-------------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH-------------
Confidence 10 11101123468999999999999999999999999999999 8889864311
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhcCC
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYLSS 971 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 971 (983)
.++..+..........+ ...+.++..++.+||..+|++||+|.++.+.++.+.+....
T Consensus 369 ----~~v~~kI~~~~~r~~~~-------~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 369 ----YEVKAKIVKNGYRMPIP-------SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ----HHHHHHHHhcCccCCCC-------CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 11111111222222222 13567888889999999999999999999999999877664
No 64
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=8.2e-37 Score=340.00 Aligned_cols=246 Identities=25% Similarity=0.301 Sum_probs=199.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|.+.+.||+|+||.||+|+.. +++.||||+++... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46788899999999999999965 68889999986542 1223567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999998874 345788999999999999999999996 99999999999999999999999999986532
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||... . ...
T Consensus 171 ~~----------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~----~-~~~------- 222 (329)
T PTZ00263 171 RT----------------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD----T-PFR------- 222 (329)
T ss_pred Cc----------------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC----C-HHH-------
Confidence 11 1246999999999999999999999999999999999999998531 1 011
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS-----MLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 961 (983)
..+..... . ...+. ....++.+++.+|++.||++||+ ++|++.|
T Consensus 223 -----~~~~i~~~-~-~~~p~-------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 223 -----IYEKILAG-R-LKFPN-------WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred -----HHHHHhcC-C-cCCCC-------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11111111 0 01111 13356889999999999999997 7888866
No 65
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.3e-36 Score=340.08 Aligned_cols=248 Identities=26% Similarity=0.389 Sum_probs=194.0
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
|...++||+|+||.||+|+.. +++.||||++...........+.+|++++++++|+||+++++++...+..++||||++
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 345688999999999999965 6889999998665544456789999999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+|+|.+.. ..++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 156 ~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~- 223 (353)
T PLN00034 156 GGSLEGTH--------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD- 223 (353)
T ss_pred CCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccc-
Confidence 99986532 2456778899999999999999996 99999999999999999999999999986542211
Q ss_pred ccccCCCCccccccCccccccccccccccCC-----CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-----KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
......||..|+|||++.. ...+.++|||||||++|||++|+.||... ....+.....
T Consensus 224 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~--~~~~~~~~~~--- 286 (353)
T PLN00034 224 ------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVG--RQGDWASLMC--- 286 (353)
T ss_pred ------------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCC--CCccHHHHHH---
Confidence 1122469999999998743 33456899999999999999999998621 1111111110
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
. +........ ...+..++.+++.+||+.||++||+++|++++=
T Consensus 287 ---------~-~~~~~~~~~-------~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 287 ---------A-ICMSQPPEA-------PATASREFRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred ---------H-HhccCCCCC-------CCccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0 000000000 123456789999999999999999999999874
No 66
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=305.14 Aligned_cols=255 Identities=24% Similarity=0.325 Sum_probs=207.5
Q ss_pred hCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++.|+..+.||+|.|+.||++.. .+|+.+|+|+++... .....+.+.+|+.|-+.++||||+++.+...+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 34566678899999999999984 578889999885432 2235688999999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeC---CCCCEEEcccccccc
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLD---EDLTALVADFGIAKL 820 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~---~~~~~kl~Dfgla~~ 820 (983)
|+|+|+.|..-+-. +..+++..+-+.++||++||+|+|.++ |||||+||.|+++- ..--+|++|||+|..
T Consensus 90 e~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIVA----REFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEE
Confidence 99999998655442 234678888999999999999999996 99999999999994 345689999999998
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
++... .....+|||+|||||+....+|+..+|||+-|||+|-++.|+.||... ++
T Consensus 163 l~~g~--------------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~--~~--------- 217 (355)
T KOG0033|consen 163 VNDGE--------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQ--------- 217 (355)
T ss_pred eCCcc--------------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc--cH---------
Confidence 77321 223368999999999999999999999999999999999999998631 11
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
..++++.++...+... +.|+...++..+|+.+|+..||.+|.|+.|.++|=+
T Consensus 218 ------~rlye~I~~g~yd~~~-----~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 218 ------HRLYEQIKAGAYDYPS-----PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred ------HHHHHHHhccccCCCC-----cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 2234444444333322 246678889999999999999999999999997644
No 67
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.6e-36 Score=338.70 Aligned_cols=254 Identities=21% Similarity=0.243 Sum_probs=202.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|.+.+.||+|+||.||+|+.. +++.||||+++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46888999999999999999975 588999999975432 223567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999864 345889999999999999999999996 99999999999999999999999999975432
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..
T Consensus 154 ----------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~----- 207 (333)
T cd05600 154 ----------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST-----PNETW----- 207 (333)
T ss_pred ----------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC-----HHHHH-----
Confidence 1123469999999999999999999999999999999999999986421 11111
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
............+... ........++.+++.+|+..+|++||+++|++++
T Consensus 208 -------~~i~~~~~~~~~~~~~-~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 208 -------ENLKYWKETLQRPVYD-DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -------HHHHhccccccCCCCC-ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1000000000000000 0001245678899999999999999999999976
No 68
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.2e-36 Score=329.37 Aligned_cols=274 Identities=17% Similarity=0.224 Sum_probs=202.5
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
++|.+.+.||+|+||.||+|+.. +++.||||+++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46888999999999999999975 578899999865432 2345678899999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|++++.+..+... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEEM----PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 9998877654332 345899999999999999999999986 999999999999999999999999999865422
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...... ......
T Consensus 154 ~~------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-~~~~~~-~~~~~~ 219 (287)
T cd07848 154 SN------------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-DQLFTI-QKVLGP 219 (287)
T ss_pred cc------------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHH-HHhhCC
Confidence 11 1112346899999999999988999999999999999999999998642110 111111 111100
Q ss_pred CCcHHHHHHHhh--cCCCCCcc------ccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIAK--YAPQHMPI------YYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...+........ ......+. .........+.++.+++.+|++.||++|||++|+++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 220 LPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred CCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000000 00000000 0001112345679999999999999999999999864
No 69
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9.4e-36 Score=321.79 Aligned_cols=257 Identities=26% Similarity=0.412 Sum_probs=206.5
Q ss_pred CCCCCCCccccCCcEeEEEEEECC----CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD----NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
++|...+.||+|+||+||+|.+.. ...||||.++..........|.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568889999999999999999742 3569999987665555567899999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++++|.+++.... ..+++..+++++.|++.|++|||+.+ |+||||||+||++++++.++|+|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREND---GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 99999999999987532 36899999999999999999999986 9999999999999999999999999998775
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~ 901 (983)
...... ......++..|+|||...+..++.++||||||+++|||++ |..||..... .
T Consensus 158 ~~~~~~-----------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--~--------- 215 (266)
T cd05033 158 DSEATY-----------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--Q--------- 215 (266)
T ss_pred ccccce-----------eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--H---------
Confidence 221110 0011235678999999998899999999999999999998 9999853210 0
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
...+. +...... +. ..+++..+.+++.+|++.+|++||+++|++++|.++
T Consensus 216 ------~~~~~-~~~~~~~--~~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 216 ------DVIKA-VEDGYRL--PP-----PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------HHHHH-HHcCCCC--CC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11111 1111000 00 012456789999999999999999999999999875
No 70
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.2e-36 Score=330.18 Aligned_cols=259 Identities=23% Similarity=0.401 Sum_probs=203.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCc----EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNT----RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
.+|+..+.||+|+||.||+|.+. +++ .||||.++.........++.+|+.+++.++||||++++++|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888999999999999999854 333 38999987554445567899999999999999999999999764 5689
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
++||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 86 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccc
Confidence 99999999999988753 335889999999999999999999986 999999999999999999999999999876
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~ 900 (983)
....... ......++..|+|||++.+..++.++||||||+++|||++ |+.||+... ..+
T Consensus 160 ~~~~~~~-----------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~-----~~~---- 219 (316)
T cd05108 160 GADEKEY-----------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASE---- 219 (316)
T ss_pred cCCCcce-----------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-----HHH----
Confidence 5332210 1111235678999999999999999999999999999998 999986321 111
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
+...+........+ ..+..++.+++.+||..+|++||++.++++++.++...
T Consensus 220 ---------~~~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 220 ---------ISSILEKGERLPQP-------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred ---------HHHHHhCCCCCCCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 11111111100001 12346788999999999999999999999999887643
No 71
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7.3e-36 Score=325.34 Aligned_cols=258 Identities=28% Similarity=0.456 Sum_probs=205.9
Q ss_pred CCCCCCCccccCCcEeEEEEEECC------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCcee
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKA 740 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 740 (983)
++|.+.+.||+|+||.||+|...+ ++.||||.++.....+..+.+.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457778999999999999998643 46799999976655555688999999999999999999999999999999
Q ss_pred EEEecccCcccccccccccC----------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCE
Q 042568 741 LVLPLMSNGSLENHLYPSHG----------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTA 810 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~ 810 (983)
+||||+++++|.+++..... ....+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 99999999999999865421 2345889999999999999999999996 9999999999999999999
Q ss_pred EEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccC
Q 042568 811 LVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFH 889 (983)
Q Consensus 811 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~ 889 (983)
+|+|||+++........ .......+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 162 kl~d~g~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~ 230 (280)
T cd05049 162 KIGDFGMSRDVYTTDYY-----------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN 230 (280)
T ss_pred EECCcccceecccCcce-----------ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99999999765322110 11122346789999999999999999999999999999998 9999853211
Q ss_pred CCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 890 DGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 890 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
. + ..+........ ..+ ...+.++.+++.+||+.+|++||++.||++.|+
T Consensus 231 --~---~------------~~~~~~~~~~~-~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 231 --E---E------------VIECITQGRLL-QRP-------RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --H---H------------HHHHHHcCCcC-CCC-------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1 1 11111111000 000 124567899999999999999999999999886
No 72
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=8e-36 Score=322.58 Aligned_cols=262 Identities=21% Similarity=0.312 Sum_probs=208.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|.+.+.||+|+||.||+|+.. +++.||||.++... ..+...++.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57888999999999999999954 78999999875432 2334567899999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.........+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999887643332455889999999999999999999986 99999999999999999999999999886643
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
... ......|+..|+|||...+..++.++||||+|+++|||++|+.||... ......+...
T Consensus 159 ~~~-------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~---~~~~~~~~~~--- 219 (267)
T cd08228 159 KTT-------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD---KMNLFSLCQK--- 219 (267)
T ss_pred hhH-------------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc---cccHHHHHHH---
Confidence 211 111235888999999999888999999999999999999999998532 1111111111
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
+........ ........+.+++.+||+.+|++||++.+|++.++.++
T Consensus 220 ----------~~~~~~~~~------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 220 ----------IEQCDYPPL------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ----------HhcCCCCCC------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 111110000 01234567899999999999999999999999998874
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.1e-36 Score=333.50 Aligned_cols=243 Identities=23% Similarity=0.300 Sum_probs=195.4
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCc
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
+.||+|+||.||++... +|+.||+|++.... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999964 68899999986542 2234567788999999999999999999999999999999999999
Q ss_pred ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccc
Q 042568 750 SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVN 829 (983)
Q Consensus 750 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~ 829 (983)
+|.+++.. ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~---- 149 (323)
T cd05595 81 ELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---- 149 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC----
Confidence 99888764 345899999999999999999999996 9999999999999999999999999987532111
Q ss_pred ccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHH
Q 042568 830 CANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPI 909 (983)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 909 (983)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... . ..
T Consensus 150 ---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~------------~~ 203 (323)
T cd05595 150 ---------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----E------------RL 203 (323)
T ss_pred ---------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-----H------------HH
Confidence 111234699999999999999999999999999999999999999853210 0 11
Q ss_pred HHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 910 VEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
.+....... ..+ .....++.+++.+|++.||++|| ++.+++++
T Consensus 204 ~~~~~~~~~--~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 204 FELILMEEI--RFP-------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHhcCCC--CCC-------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 111111100 011 12456788999999999999998 89998875
No 74
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=353.62 Aligned_cols=261 Identities=27% Similarity=0.415 Sum_probs=210.7
Q ss_pred CCCCccccCCcEeEEEEEEC--CCc----EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 670 CPSSLIGSGRFGHVYKGVLQ--DNT----RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~--~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
+..+.||+|+||.||.|... ++. .||||.+..........+|.+|..+|++++|||||+++|+|-+....+|++
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l 774 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL 774 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence 34678999999999999954 343 389999987777777899999999999999999999999999999999999
Q ss_pred ecccCcccccccccccCc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 744 PLMSNGSLENHLYPSHGL---SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
|||++|+|..++...+.. ...+...+.+.++.|||+|+.||++++ +|||||.+.|+|++....+||+|||+|+.
T Consensus 775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlArD 851 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLARD 851 (1025)
T ss_pred hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchhHh
Confidence 999999999999876332 346899999999999999999999995 99999999999999999999999999995
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHH
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~ 899 (983)
....+.. ...+...-...|||||.+..+.++.|+|||||||++||++| |..||.... .
T Consensus 852 iy~~~yy-----------r~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~----n------ 910 (1025)
T KOG1095|consen 852 IYDKDYY-----------RKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS----N------ 910 (1025)
T ss_pred hhhchhe-----------eccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc----h------
Confidence 5433221 11111123468999999999999999999999999999999 888874321 1
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhc
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYL 969 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 969 (983)
.++........ +++.. ..|+..+.++|..||+.+|++||++..+++.+..+.+..
T Consensus 911 -------~~v~~~~~~gg---RL~~P-----~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 911 -------FEVLLDVLEGG---RLDPP-----SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred -------HHHHHHHHhCC---ccCCC-----CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 11222122221 12211 347889999999999999999999999999888876543
No 75
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=335.53 Aligned_cols=246 Identities=23% Similarity=0.277 Sum_probs=199.1
Q ss_pred CCCCCCCccccCCcEeEEEEEECC--CcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD--NTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~--~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
++|...+.||+|+||.||+|.... +..||+|++.... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468889999999999999998543 3579999986542 223456788999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 110 ~Ey~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN----KRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 9999999999988643 45889999999999999999999996 9999999999999999999999999998653
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... . .
T Consensus 183 ~~----------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~----~-~------- 234 (340)
T PTZ00426 183 TR----------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE----P-L------- 234 (340)
T ss_pred CC----------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC----H-H-------
Confidence 21 112469999999999999889999999999999999999999986321 0 0
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
........... ..|. .....+.+++.+|++.||++|+ +++|++++
T Consensus 235 -----~~~~~i~~~~~--~~p~-------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 235 -----LIYQKILEGII--YFPK-------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----HHHHHHhcCCC--CCCC-------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 01111111110 0111 1335678999999999999995 89999876
No 76
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.3e-36 Score=332.86 Aligned_cols=241 Identities=25% Similarity=0.370 Sum_probs=193.4
Q ss_pred cccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 675 IGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 675 iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
||+|+||.||+|... +++.||+|+++... .......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999965 57889999986532 223456788999999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~------ 147 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD------ 147 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC------
Confidence 998864 345899999999999999999999996 9999999999999999999999999987542211
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
.......||+.|+|||.+.+..++.++||||+||++|||++|+.||... ...+. ..
T Consensus 148 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~~~~------------~~ 203 (312)
T cd05585 148 -------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NVNEM------------YR 203 (312)
T ss_pred -------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC-----CHHHH------------HH
Confidence 1112356999999999999999999999999999999999999998531 11111 11
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC---HHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS---MLDVAHE 961 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~evl~~ 961 (983)
..... ....+ .....++.+++.+|++.||++||+ +.|++.+
T Consensus 204 ~~~~~--~~~~~-------~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 204 KILQE--PLRFP-------DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHcC--CCCCC-------CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 11111 00011 124467889999999999999975 6677654
No 77
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.9e-35 Score=317.51 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=199.7
Q ss_pred CCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
+|+..+.||+|+||.||+|.+.++..+|+|.+..... ..+++.+|++++++++||||+++++++...+..++||||++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc--cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4777889999999999999988888999998754322 24678999999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||.++........
T Consensus 83 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 83 NGCLLNYLRQRQ---GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred CCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 999999886432 35899999999999999999999996 999999999999999999999999998865322111
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
......++..|+|||+..+..++.++||||||+++|||++ |+.||.... ..+.
T Consensus 157 ------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-----~~~~--------- 210 (256)
T cd05114 157 ------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-----NYEV--------- 210 (256)
T ss_pred ------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHH---------
Confidence 1111235678999999998889999999999999999999 899985321 1111
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
++. +........+ ...+.++.+++.+||+.+|++||+++|+++.|
T Consensus 211 ---~~~-i~~~~~~~~~-------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 211 ---VEM-ISRGFRLYRP-------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---HHH-HHCCCCCCCC-------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 111 1110000011 11235789999999999999999999999876
No 78
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=345.80 Aligned_cols=273 Identities=22% Similarity=0.273 Sum_probs=211.6
Q ss_pred CCCCCCccccCCcEeEEEEEECCC-cEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeE-Eec------CCc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDN-TRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITI-CSK------PDF 738 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~-~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~~~ 738 (983)
+.++.++|.+|||+.||.|....+ ..||+|++-.. .+...+..++|+++|++|+ |+|||.+++. ... ..+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 456788999999999999997665 99999998666 5557888999999999996 9999999993 311 246
Q ss_pred eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIA 818 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla 818 (983)
.+|.||||.||+|-+++.... ...|++.++++|+.|+++|+++||... ++|||||||-+|||++.++..||||||.|
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rl--q~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRL--QTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EEeehhhccCCcHHHHHHHHH--hccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccc
Confidence 689999999999999998654 345999999999999999999999986 47999999999999999999999999999
Q ss_pred ccccCCcccccccCCCCccccccCcccccccccccccc---CCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 819 KLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYG---MGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
.-.....+.. .....-...-....|+-|+|||++ .+..+++|+|||++||+||-|+....||+.... .
T Consensus 194 tt~~~~~~~~----~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--l--- 264 (738)
T KOG1989|consen 194 TTKILSPTSA----QEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--L--- 264 (738)
T ss_pred ccccCCCccH----HHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--e---
Confidence 7543221100 000000011113579999999986 467889999999999999999999999974211 0
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhcCCCchh
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYLSSPSSL 975 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~ 975 (983)
.++... ...|. ++.+...+.+||..|++.||.+||++-||+.++.++........+.
T Consensus 265 aIlng~------------------Y~~P~-----~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~ 321 (738)
T KOG1989|consen 265 AILNGN------------------YSFPP-----FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDI 321 (738)
T ss_pred eEEecc------------------ccCCC-----CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcccc
Confidence 000000 00111 1346788999999999999999999999999999998766554443
Q ss_pred H
Q 042568 976 I 976 (983)
Q Consensus 976 ~ 976 (983)
+
T Consensus 322 ~ 322 (738)
T KOG1989|consen 322 Y 322 (738)
T ss_pred c
Confidence 3
No 79
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6e-36 Score=327.77 Aligned_cols=273 Identities=22% Similarity=0.282 Sum_probs=197.4
Q ss_pred CCCCCCCccccCCcEeEEEEEEC--CCcEEEEEEeecccCcc-hhHHHHHHHHHHHhc---CCCCccceeeEEe-----c
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ--DNTRIAVKVLDLTTTGE-ITGSFKRECQILKRI---RHRNLIRIITICS-----K 735 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~--~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~ 735 (983)
++|.+.+.||+|+||.||+|+.. +++.||||.++.....+ ....+.+|+++++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999863 46789999986544322 345667788887776 6999999999885 2
Q ss_pred CCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 736 PDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 736 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
....++||||++ ++|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccc
Confidence 346789999997 58888886433 345899999999999999999999996 999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
|+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ...+.
T Consensus 155 g~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~-~~~~~ 219 (290)
T cd07862 155 GLARIYSFQM--------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLG 219 (290)
T ss_pred cceEeccCCc--------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH-HHHHH
Confidence 9998654221 11234689999999999988899999999999999999999999864211 11111
Q ss_pred HHHHhhCCCCCcHHHHHHH--h-hcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 896 EWVKRHYPHRLDPIVEKAI--A-KYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+....... ........ . .......+........+....+.+++.+|++.||++|||+.|++++
T Consensus 220 ~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 220 KILDVIGLPG-EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred HHHHHhCCCC-hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 2211110000 00000000 0 0000000001111112345678899999999999999999999864
No 80
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.9e-36 Score=338.60 Aligned_cols=271 Identities=19% Similarity=0.277 Sum_probs=200.7
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
.++|.+.+.||+|+||.||+|... +++.||+|... ...+.+|++++++++||||+++++++......++|+|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 357999999999999999999964 68889999642 2457889999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
++. ++|..++.. ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+|+.....
T Consensus 164 ~~~-~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 164 RYK-TDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred cCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 996 577777654 345889999999999999999999996 999999999999999999999999999754321
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccC-C-----CCchHHHH
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFH-D-----GSSLHEWV 898 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~-~-----~~~l~~~~ 898 (983)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... + ...+...+
T Consensus 236 ~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~ 303 (391)
T PHA03212 236 NA------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLII 303 (391)
T ss_pred cc------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHH
Confidence 11 111234799999999999999999999999999999999999988643211 1 11122222
Q ss_pred HhhC------CCCCcHHHHHHHhhc-CCCCCccccccch---HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 899 KRHY------PHRLDPIVEKAIAKY-APQHMPIYYNKVW---SDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 899 ~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.... +.......+...... .........+..| .+.+.++.+++.+|++.||++|||++|++++=.
T Consensus 304 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 304 RRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred HHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 2111 111111111111000 0000000111112 235678999999999999999999999997543
No 81
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.4e-36 Score=333.12 Aligned_cols=243 Identities=22% Similarity=0.281 Sum_probs=195.8
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCc
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
++||+|+||.||++... +++.||||++.... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999964 68899999996542 2234567889999999999999999999999999999999999999
Q ss_pred ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccc
Q 042568 750 SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVN 829 (983)
Q Consensus 750 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~ 829 (983)
+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~---- 149 (328)
T cd05593 81 ELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA---- 149 (328)
T ss_pred CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcc----
Confidence 99888764 345899999999999999999999996 9999999999999999999999999987532111
Q ss_pred ccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHH
Q 042568 830 CANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPI 909 (983)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 909 (983)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......
T Consensus 150 ---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~-----~~~~~~~--------- 206 (328)
T cd05593 150 ---------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFEL--------- 206 (328)
T ss_pred ---------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-----HHHHHHH---------
Confidence 11123469999999999999899999999999999999999999985321 1111111
Q ss_pred HHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 910 VEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
.... ....+ .....++.+++.+|++.||++|| ++.|++++
T Consensus 207 ---~~~~--~~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 207 ---ILME--DIKFP-------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ---hccC--CccCC-------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1000 00111 12346788999999999999997 89999876
No 82
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=359.65 Aligned_cols=439 Identities=28% Similarity=0.374 Sum_probs=367.6
Q ss_pred eEEEEEcccCCcccccccccccCCCCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEecc
Q 042568 78 KVVELDLSARSIYGTISPALANLSSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLG 157 (983)
Q Consensus 78 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls 157 (983)
++.+||+++|.+. ..|..+..+.+|+.|+++.|.+. ..|.+.+++.+|++|+|..|.+. .+|..+..+++|++||+|
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 4899999998875 88999999999999999999998 88999999999999999999999 999999999999999999
Q ss_pred CcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceeccccccc
Q 042568 158 NNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMF 237 (983)
Q Consensus 158 ~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 237 (983)
.|++. .+|..+. .++.+..++.++|......+ . ...+.+++..|.+.+.++..+.+++. .|||..|.+
T Consensus 123 ~N~f~-~~Pl~i~---~lt~~~~~~~s~N~~~~~lg-----~-~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~ 190 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIE---VLTAEEELAASNNEKIQRLG-----Q-TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEM 190 (1081)
T ss_pred hhccC-CCchhHH---hhhHHHHHhhhcchhhhhhc-----c-ccchhhhhhhhhcccchhcchhhhhe--eeecccchh
Confidence 99997 8888765 78999999999994432332 2 23899999999999999999998877 799999998
Q ss_pred ccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCc
Q 042568 238 SGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCN 317 (983)
Q Consensus 238 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N 317 (983)
. . ..+..+.+|+.|.+..|++.... -..++|+.|+.++|.++...+. ..+.+|+++++++|
T Consensus 191 ~-~---~dls~~~~l~~l~c~rn~ls~l~------------~~g~~l~~L~a~~n~l~~~~~~---p~p~nl~~~dis~n 251 (1081)
T KOG0618|consen 191 E-V---LDLSNLANLEVLHCERNQLSELE------------ISGPSLTALYADHNPLTTLDVH---PVPLNLQYLDISHN 251 (1081)
T ss_pred h-h---hhhhhccchhhhhhhhcccceEE------------ecCcchheeeeccCcceeeccc---cccccceeeecchh
Confidence 6 3 23577899999999999886543 2357899999999999843322 23468999999999
Q ss_pred cccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcc
Q 042568 318 LIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPD 397 (983)
Q Consensus 318 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 397 (983)
+++ .+|++++.+.+|+.|+..+|+++ .+|..+..+++|+.|.+.+|.+. .+|.....++.|++|+|..|+|....+.
T Consensus 252 ~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~ 328 (1081)
T KOG0618|consen 252 NLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDN 328 (1081)
T ss_pred hhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchH
Confidence 998 56799999999999999999996 78888999999999999999999 6777888899999999999999844443
Q ss_pred cccCccc-chhhcccCccCCCCCcc-cccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCCCCCCccccccc
Q 042568 398 SFANLSQ-LRRLLLYGNHLSGTIPS-SLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKM 475 (983)
Q Consensus 398 ~~~~l~~-L~~L~l~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l 475 (983)
.|.-+.. |+.|+.+.|++. ..|. .=..++.|+.|++.+|.++...-..+.+.+.|++ |+|++|+|.......+.++
T Consensus 329 ~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKV-LhLsyNrL~~fpas~~~kl 406 (1081)
T KOG0618|consen 329 FLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKV-LHLSYNRLNSFPASKLRKL 406 (1081)
T ss_pred HHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceee-eeecccccccCCHHHHhch
Confidence 3444433 888888889888 4442 2234567899999999999877777888899997 9999999985555668899
Q ss_pred cccccccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCccccCC-cCccccCCCCcceEe
Q 042568 476 DMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGE-IPQSFQASPTLKQLN 554 (983)
Q Consensus 476 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~l~ 554 (983)
..|++|+||+|+|+ .+|..+..+..|++|...+|+|. ..| ++..++.|+.+|+|.|+|+-. +|... ..++|++||
T Consensus 407 e~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~-p~p~LkyLd 482 (1081)
T KOG0618|consen 407 EELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL-PSPNLKYLD 482 (1081)
T ss_pred HHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhC-CCcccceee
Confidence 99999999999998 88999999999999999999998 567 888999999999999998743 34433 338999999
Q ss_pred ccCCc
Q 042568 555 FSFNK 559 (983)
Q Consensus 555 l~~N~ 559 (983)
|++|.
T Consensus 483 lSGN~ 487 (1081)
T KOG0618|consen 483 LSGNT 487 (1081)
T ss_pred ccCCc
Confidence 99997
No 83
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.6e-36 Score=349.47 Aligned_cols=259 Identities=25% Similarity=0.335 Sum_probs=206.0
Q ss_pred HHhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCC----
Q 042568 664 EATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPD---- 737 (983)
Q Consensus 664 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 737 (983)
...++|.+.+.||+|+||+||+|+. .+++.||||++..... ......+.+|+.++..++|+|++++.+.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3456899999999999999999985 4789999999865532 334567889999999999999999988765432
Q ss_pred ----ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEc
Q 042568 738 ----FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVA 813 (983)
Q Consensus 738 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~ 813 (983)
..++||||+++|+|.+++.........+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEE
Confidence 357999999999999988754444557899999999999999999999996 9999999999999999999999
Q ss_pred cccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCc
Q 042568 814 DFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSS 893 (983)
Q Consensus 814 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~ 893 (983)
|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... .
T Consensus 186 DFGls~~~~~~~~~-----------~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~ 249 (496)
T PTZ00283 186 DFGFSKMYAATVSD-----------DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-----N 249 (496)
T ss_pred ecccCeeccccccc-----------cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----C
Confidence 99999876432111 1122357999999999999999999999999999999999999998531 1
Q ss_pred hHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 894 LHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 894 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+. ++......... .+ ...+.++.+++.+|++.+|++||++.+++++
T Consensus 250 ~~~~------------~~~~~~~~~~~-~~-------~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 250 MEEV------------MHKTLAGRYDP-LP-------PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHH------------HHHHhcCCCCC-CC-------CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111 22222111110 11 1245678999999999999999999999875
No 84
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.3e-35 Score=319.83 Aligned_cols=255 Identities=26% Similarity=0.430 Sum_probs=205.1
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
++|...++||+|+||.||+|...+++.||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 46778899999999999999988888999998754322 3578999999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.... ...+++..++.++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++.......
T Consensus 84 ~~~~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 84 AKGSLLDFLKSDE--GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 9999999987543 345888999999999999999999986 99999999999999999999999999986543211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......++..|+|||+..+..++.++||||||+++|+|++ |+.||.... .....
T Consensus 159 ~------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~---------- 214 (261)
T cd05072 159 T------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--NSDVM---------- 214 (261)
T ss_pred e------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--HHHHH----------
Confidence 0 1112346778999999998889999999999999999998 999985321 01111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
..+...... + .....+.++.+++.+|+..+|++||+++++.+.|+++
T Consensus 215 ------~~~~~~~~~--~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 215 ------SALQRGYRM--P-----RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ------HHHHcCCCC--C-----CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 111111100 0 0112456789999999999999999999999998763
No 85
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=9.2e-36 Score=347.18 Aligned_cols=254 Identities=21% Similarity=0.276 Sum_probs=202.0
Q ss_pred CCCCCCccccCCcEeEEEEEEC-C-CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-D-NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.|...+.||+|+||.||+|... + ++.||+|.+..... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE-RQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 3778899999999999999854 3 57788887644332 2346778899999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++|+|.+++........++++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999887654333456899999999999999999999986 9999999999999999999999999998664321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.. .......||++|+|||++.+..++.++|||||||++|||++|+.||... ...
T Consensus 224 ~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~-----~~~---------- 277 (478)
T PTZ00267 224 SL-----------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP-----SQR---------- 277 (478)
T ss_pred cc-----------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----CHH----------
Confidence 10 1122356999999999999999999999999999999999999998532 111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+........... ..+ ..+..++.+++.+|+..+|++||++.+++++
T Consensus 278 --~~~~~~~~~~~~-~~~-------~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 278 --EIMQQVLYGKYD-PFP-------CPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred --HHHHHHHhCCCC-CCC-------ccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 112221111111 011 1244678999999999999999999999753
No 86
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.1e-35 Score=323.31 Aligned_cols=261 Identities=27% Similarity=0.440 Sum_probs=202.6
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCc
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDF 738 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 738 (983)
++++|+..+.||+|+||.||+|.+. ++..||||.+..........++.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567889999999999999999753 2467999998544333345678899999999999999999999999899
Q ss_pred eeEEEecccCcccccccccccCc------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEE
Q 042568 739 KALVLPLMSNGSLENHLYPSHGL------SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALV 812 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl 812 (983)
.++||||+++|+|.+++...... ...+++..+..++.|+++|++|||+.+ ++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 99999999999999988643211 234688899999999999999999986 999999999999999999999
Q ss_pred ccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCC
Q 042568 813 ADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDG 891 (983)
Q Consensus 813 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~ 891 (983)
+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 161 ~dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~--- 226 (277)
T cd05062 161 GDFGMTRDIYETDYY-----------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS--- 226 (277)
T ss_pred CCCCCccccCCccee-----------ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC---
Confidence 999998765422111 01112346788999999998889999999999999999999 688875321
Q ss_pred CchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 892 SSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 892 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
...... ... .......+ ..++..+.+++.+|++.+|++|||+.|+++.|++
T Consensus 227 --~~~~~~------------~~~-~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 227 --NEQVLR------------FVM-EGGLLDKP-------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred --HHHHHH------------HHH-cCCcCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 111111 101 10000011 1245678999999999999999999999998863
No 87
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.7e-35 Score=322.82 Aligned_cols=269 Identities=26% Similarity=0.331 Sum_probs=202.9
Q ss_pred CCCCccccCCcEeEEEEEE-----CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecC--CceeEE
Q 042568 670 CPSSLIGSGRFGHVYKGVL-----QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKP--DFKALV 742 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 742 (983)
...+.||+|+||+||++.. .+++.||+|.++..........+.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7789999999999988653 357789999987654444567889999999999999999999988654 357899
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++++|.+++.. ..+++..++.++.|+++|++|||+.+ |+||||||+||++++++.++|+|||+++...
T Consensus 87 ~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 87 MEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999998863 35899999999999999999999996 9999999999999999999999999998665
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
...... .......++..|+|||...+..++.++||||||+++|||++|+.||..... ...+......
T Consensus 159 ~~~~~~----------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~---~~~~~~~~~~ 225 (283)
T cd05080 159 EGHEYY----------RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK---KFEEMIGPKQ 225 (283)
T ss_pred Ccchhh----------ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcc---hhhhhhcccc
Confidence 322110 001112356779999999988899999999999999999999999754221 1111111111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
.........+.+..... .+ ....++.++.+++.+|++.+|++|||++++++.|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 226 GQMTVVRLIELLERGMR--LP-----CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cccchhhhhhhhhcCCC--CC-----CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00101111111111110 00 01234578999999999999999999999999998874
No 88
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-38 Score=310.65 Aligned_cols=248 Identities=22% Similarity=0.339 Sum_probs=207.2
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
|.+++++|+|+||.||||.++ +|..||||.+..+. ...++.+|+.++++...|++|++||.|......++|||||.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 445788999999999999966 68899999985443 46889999999999999999999999988899999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
.|++.+.+.-. ++++.+.++..+.+..++||+|||... -+|||||+.|||++.+|.+|++|||.|..+.+.
T Consensus 112 AGSiSDI~R~R---~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT--- 182 (502)
T KOG0574|consen 112 AGSISDIMRAR---RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT--- 182 (502)
T ss_pred CCcHHHHHHHh---cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh---
Confidence 99999988754 578999999999999999999999984 799999999999999999999999999765421
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
.....++.||+.|||||++..-.|+.++||||+|++..||..|++||....+-..
T Consensus 183 ----------MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA--------------- 237 (502)
T KOG0574|consen 183 ----------MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA--------------- 237 (502)
T ss_pred ----------HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce---------------
Confidence 2344567899999999999999999999999999999999999999875422100
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+ ...+...|+.++ ..++-+.++.+++..|+...|++|-|+.++++|
T Consensus 238 ------I-FMIPT~PPPTF~-KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 238 ------I-FMIPTKPPPTFK-KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ------e-EeccCCCCCCCC-ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 0 111222233333 334556778899999999999999999999875
No 89
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=323.41 Aligned_cols=264 Identities=27% Similarity=0.377 Sum_probs=212.8
Q ss_pred CCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
...+.++||+|.||.|..+....+.+||||.++.......+..|.+|+++|.+++||||++++|+|..++-.++|+|||+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 44567899999999999999987899999999888777778999999999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+|+|.+++..+.. +........+|+.|||.|++||.+. ++||||+.+.|+|+|+++++||+|||+++-+...+.+
T Consensus 619 nGDLnqFl~ahea--pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 619 NGDLNQFLSAHEL--PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred cCcHHHHHHhccC--cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999999986642 2245566778999999999999987 5999999999999999999999999999865433222
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh--CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT--GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt--g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
...+..+-..+|||||.+.-++++.++|||+||+++||+++ ...||..+..
T Consensus 694 -----------~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~---------------- 746 (807)
T KOG1094|consen 694 -----------RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD---------------- 746 (807)
T ss_pred -----------eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH----------------
Confidence 22223455689999999999999999999999999999876 6778765422
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
+++++....-...+.. ...-....-|+.++.+++.+||.++-++||+++++...|.+.
T Consensus 747 -e~vven~~~~~~~~~~-~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 747 -EQVVENAGEFFRDQGR-QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred -HHHHHhhhhhcCCCCc-ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1222222222121111 111112234788999999999999999999999999988764
No 90
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.7e-36 Score=321.58 Aligned_cols=250 Identities=31% Similarity=0.521 Sum_probs=193.3
Q ss_pred CCccccCCcEeEEEEEEC-----CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 672 SSLIGSGRFGHVYKGVLQ-----DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
.+.||.|.||.||+|.+. .+..|+||.++.....+..+.|.+|++.+++++||||++++|++...+..++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999976 256699999966555555789999999999999999999999999888899999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++|+|.+++.... ...+++..++.|+.|+++||+|||+.+ ++|+||+++||++++++.+||+|||++........
T Consensus 84 ~~g~L~~~L~~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 84 PGGSLDDYLKSKN--KEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp TTEBHHHHHHHTC--TTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999998652 356899999999999999999999985 99999999999999999999999999987632111
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. .......+...|+|||.+.+..++.++||||||+++|||++ |+.||... ..
T Consensus 159 ~-----------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~----------- 211 (259)
T PF07714_consen 159 Y-----------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DN----------- 211 (259)
T ss_dssp E-----------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CH-----------
T ss_pred c-----------cccccccccccccccccccccccccccccccccccccccccccccccccc-----cc-----------
Confidence 1 11222357789999999999889999999999999999999 67887532 11
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.+..+.. ........+ ..++..+.+++.+||+.+|++||+++++++.|
T Consensus 212 -~~~~~~~-~~~~~~~~~-------~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 212 -EEIIEKL-KQGQRLPIP-------DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -HHHHHHH-HTTEETTSB-------TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -ccccccc-cccccceec-------cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1111121 111111111 12456788999999999999999999999876
No 91
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.3e-35 Score=315.94 Aligned_cols=249 Identities=30% Similarity=0.449 Sum_probs=197.9
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
+.||+|+||.||+|... +++.||+|.+......+....+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999964 68889999886555555567899999999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~----- 149 (252)
T cd05084 81 LTFLRTE---GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY----- 149 (252)
T ss_pred HHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccc-----
Confidence 9988643 345889999999999999999999996 99999999999999999999999999875432110
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIV 910 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 910 (983)
........++..|+|||.+.+..++.++||||||+++|||++ |..||..... ...
T Consensus 150 ------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~------------------~~~ 205 (252)
T cd05084 150 ------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN------------------QQT 205 (252)
T ss_pred ------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH------------------HHH
Confidence 011111234567999999999889999999999999999998 8888753211 001
Q ss_pred HHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 911 EKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
...+........ ...++.++.+++.+|++.+|++|||+.|+.+.|+
T Consensus 206 ~~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 206 REAIEQGVRLPC-------PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHcCCCCCC-------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 111111111001 1124567899999999999999999999999875
No 92
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.4e-36 Score=334.74 Aligned_cols=273 Identities=19% Similarity=0.277 Sum_probs=197.7
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCC-----cee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPD-----FKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 740 (983)
+|+..++||+|+||.||+|+.. +++.||||++..... .....++.+|++++++++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778899999999999999964 688999999864322 223457889999999999999999999885432 469
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
+||||++ ++|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999996 588887754 345899999999999999999999996 99999999999999999999999999985
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCC--CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG--KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+
T Consensus 153 ~~~~~~~----------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~--~~~~~~~~ 220 (338)
T cd07859 153 AFNDTPT----------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLI 220 (338)
T ss_pred cccccCc----------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHH
Confidence 4321110 011123579999999999866 678999999999999999999999985321 11111111
Q ss_pred HhhCCCCCcHHH--------HHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 899 KRHYPHRLDPIV--------EKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
............ ........ ...+......+.....++.+++.+|++.||++|||++|++++
T Consensus 221 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 221 TDLLGTPSPETISRVRNEKARRYLSSMR-KKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHhCCCCHHHHHHhhhhhHHHHHHhhc-ccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 111111000000 00111111 001111111122345678899999999999999999999976
No 93
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-35 Score=337.78 Aligned_cols=265 Identities=22% Similarity=0.261 Sum_probs=198.2
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
.|...+.||+|+||+||+|+.. +++.||||++.... .......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5778899999999999999954 67889999996543 22345678999999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIRM----EVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 99999999988643 35889999999999999999999986 999999999999999999999999998654211
Q ss_pred cccccccC------C----------------------------CCccccccCccccccccccccccCCCCCCccchhHHH
Q 042568 825 DESVNCAN------D----------------------------SMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSF 870 (983)
Q Consensus 825 ~~~~~~~~------~----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~Sl 870 (983)
........ . ...........+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 10000000 0 0000001123579999999999999889999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhh--hcCCC
Q 042568 871 GVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLL--CTQYN 948 (983)
Q Consensus 871 G~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~d 948 (983)
||++|||++|+.||...... +.....+........+. ......++.+++.+ |...+
T Consensus 235 G~il~elltG~~Pf~~~~~~-----------------~~~~~i~~~~~~~~~~~-----~~~~s~~~~dli~~ll~~~~~ 292 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPT-----------------ETQLKVINWENTLHIPP-----QVKLSPEAVDLITKLCCSAEE 292 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHH-----------------HHHHHHHccccccCCCC-----CCCCCHHHHHHHHHHccCccc
Confidence 99999999999998642110 00111111000001111 11234567778877 55666
Q ss_pred CCCCCCHHHHHHH
Q 042568 949 PSTRPSMLDVAHE 961 (983)
Q Consensus 949 P~~RPs~~evl~~ 961 (983)
|..||+++|++++
T Consensus 293 ~~~R~~~~~~l~h 305 (381)
T cd05626 293 RLGRNGADDIKAH 305 (381)
T ss_pred ccCCCCHHHHhcC
Confidence 7779999999976
No 94
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.3e-35 Score=319.74 Aligned_cols=263 Identities=26% Similarity=0.419 Sum_probs=206.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCcee
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKA 740 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 740 (983)
.+|.+.+.||+|+||.||++... ++..+|+|.+..... .....+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH-HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 46778899999999999999852 245589998865432 34567999999999999999999999999999999
Q ss_pred EEEecccCcccccccccccC---------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEE
Q 042568 741 LVLPLMSNGSLENHLYPSHG---------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTAL 811 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~---------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~k 811 (983)
+||||+++++|.+++..... ....+++..++.++.|++.||+|||+.+ ++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEE
Confidence 99999999999988864321 1235899999999999999999999996 99999999999999999999
Q ss_pred EccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCC
Q 042568 812 VADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHD 890 (983)
Q Consensus 812 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~ 890 (983)
|+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 161 l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~- 228 (288)
T cd05093 161 IGDFGMSRDVYSTDYY-----------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN- 228 (288)
T ss_pred eccCCccccccCCcee-----------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 9999999865322111 11122346788999999998889999999999999999999 8888753211
Q ss_pred CCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhc
Q 042568 891 GSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYL 969 (983)
Q Consensus 891 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 969 (983)
....+........ ..+ ...+.++.+++.+|++.+|.+|||++|+.+.|+.+.+..
T Consensus 229 ----------------~~~~~~i~~~~~~-~~~-------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 229 ----------------NEVIECITQGRVL-QRP-------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred ----------------HHHHHHHHcCCcC-CCC-------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 0111111111110 001 113467899999999999999999999999999998653
No 95
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.8e-36 Score=337.75 Aligned_cols=265 Identities=20% Similarity=0.229 Sum_probs=200.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|...+.||+|+||.||+|+.. +++.||||++.... .......+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888999999999999999965 68899999996542 2234567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||+++.+..
T Consensus 81 E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMKK----DTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 999999999988642 35899999999999999999999996 99999999999999999999999999986543
Q ss_pred CcccccccCCC--------------C-------c----cccccCccccccccccccccCCCCCCccchhHHHHHHHHHHH
Q 042568 824 IDESVNCANDS--------------M-------S----FTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIV 878 (983)
Q Consensus 824 ~~~~~~~~~~~--------------~-------~----~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ell 878 (983)
........... . . ........+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 21110000000 0 0 000111246999999999999999999999999999999999
Q ss_pred hCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC---H
Q 042568 879 TGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS---M 955 (983)
Q Consensus 879 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~ 955 (983)
+|+.||.... ... ..............+. . .....++.+++.+|+. +|.+|++ +
T Consensus 234 ~G~~Pf~~~~-----~~~------------~~~~i~~~~~~~~~~~--~---~~~s~~~~~li~~ll~-~p~~R~~~~~~ 290 (364)
T cd05599 234 VGYPPFCSDN-----PQE------------TYRKIINWKETLQFPD--E---VPLSPEAKDLIKRLCC-EAERRLGNNGV 290 (364)
T ss_pred cCCCCCCCCC-----HHH------------HHHHHHcCCCccCCCC--C---CCCCHHHHHHHHHHcc-CHhhcCCCCCH
Confidence 9999986321 111 1111111000000010 0 0134567888888986 9999998 9
Q ss_pred HHHHHH
Q 042568 956 LDVAHE 961 (983)
Q Consensus 956 ~evl~~ 961 (983)
+|++++
T Consensus 291 ~~ll~h 296 (364)
T cd05599 291 NEIKSH 296 (364)
T ss_pred HHHhcC
Confidence 999875
No 96
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=6.3e-35 Score=317.46 Aligned_cols=258 Identities=25% Similarity=0.406 Sum_probs=200.5
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCc----EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNT----RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
++|...+.||+|+||.||+|.+. +++ +||+|.+..........++..|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 45777899999999999999964 344 4778877544333345678888989999999999999998864 45688
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
++||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 86 i~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceec
Confidence 99999999999998753 345899999999999999999999986 999999999999999999999999999866
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~ 900 (983)
...... .......++..|+|||+..+..++.++||||||+++||+++ |+.||..... ....+.
T Consensus 160 ~~~~~~-----------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~--- 223 (279)
T cd05111 160 YPDDKK-----------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDL--- 223 (279)
T ss_pred cCCCcc-----------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH---
Confidence 432211 11122457789999999998899999999999999999998 9999853211 111111
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHh
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQ 967 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 967 (983)
+........+ ..+...+.+++.+||..+|++|||+.|+++.|..+..
T Consensus 224 -------------~~~~~~~~~~-------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 224 -------------LEKGERLAQP-------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred -------------HHCCCcCCCC-------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 1111100001 1134567889999999999999999999999988765
No 97
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-35 Score=321.28 Aligned_cols=258 Identities=25% Similarity=0.410 Sum_probs=202.5
Q ss_pred CCCCCCccccCCcEeEEEEEE-----CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-----QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
+|+..+.||+|+||.||+|.. .++..||+|.+...........+.+|++++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence 466788999999999999984 245789999987554444557889999999999999999999999999999999
Q ss_pred EecccCcccccccccccC-------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCC
Q 042568 743 LPLMSNGSLENHLYPSHG-------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLT 809 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~ 809 (983)
|||+++++|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCCc
Confidence 999999999998853211 1235889999999999999999999996 999999999999999999
Q ss_pred EEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccc
Q 042568 810 ALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLF 888 (983)
Q Consensus 810 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~ 888 (983)
+||+|||+++........ .......++..|+|||+..+..++.++||||||+++|||++ |..||....
T Consensus 163 ~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05090 163 VKISDLGLSREIYSADYY-----------RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS 231 (283)
T ss_pred EEeccccccccccCCcce-----------ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999865432211 11122346778999999988889999999999999999999 888875321
Q ss_pred CCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 889 HDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 889 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
.....+.+. ..... + ....++.++.+++.+|++.+|++||++.++.++|+.
T Consensus 232 --~~~~~~~~~----------------~~~~~--~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 232 --NQEVIEMVR----------------KRQLL--P-----CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHHHHH----------------cCCcC--C-----CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 011111111 10000 0 012245678899999999999999999999998864
No 98
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.1e-35 Score=330.22 Aligned_cols=243 Identities=26% Similarity=0.351 Sum_probs=194.1
Q ss_pred CccccCCcEeEEEEEE----CCCcEEEEEEeeccc---CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 673 SLIGSGRFGHVYKGVL----QDNTRIAVKVLDLTT---TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+.||+|+||.||+++. .+++.||||+++... .......+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999985 357889999986532 222345678899999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++|+|.+++.. ...+.+..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999998864 335788889999999999999999996 9999999999999999999999999987432211
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...
T Consensus 155 -------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~-----~~~--------- 207 (323)
T cd05584 155 -------------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN-----RKK--------- 207 (323)
T ss_pred -------------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC-----HHH---------
Confidence 11123469999999999999889999999999999999999999986321 111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
..+....... ..+ .....++.+++.+|++.+|++|| ++++++++
T Consensus 208 ---~~~~~~~~~~--~~~-------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 208 ---TIDKILKGKL--NLP-------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred ---HHHHHHcCCC--CCC-------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 1111111100 111 12346788999999999999999 88888875
No 99
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.2e-35 Score=315.72 Aligned_cols=255 Identities=31% Similarity=0.477 Sum_probs=204.5
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
++|...+.||+|++|.||+|...+++.||+|.++.... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 46788899999999999999987788899999865432 3567899999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.... ...+++..+..++.|+++|+.|||+.+ |+||||||+||+++.++.++|+|||+++.......
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 84 KYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred cCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 9999999987543 346899999999999999999999996 99999999999999999999999999987652111
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......++..|+|||+..+..++.++||||||+++|||++ |+.||..... .
T Consensus 159 ~------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~---------- 211 (261)
T cd05068 159 E------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN-----A---------- 211 (261)
T ss_pred c------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH-----H----------
Confidence 0 0011123468999999999899999999999999999999 9999853210 0
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.... .+........+ ..++..+.+++.+|++.+|++||+++++.+.|+++
T Consensus 212 --~~~~-~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 212 --EVLQ-QVDQGYRMPCP-------PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred --HHHH-HHHcCCCCCCC-------CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0111 11111110001 12456789999999999999999999999998753
No 100
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.6e-35 Score=329.16 Aligned_cols=246 Identities=25% Similarity=0.349 Sum_probs=194.1
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHH---HhcCCCCccceeeEEecCCceeEE
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQIL---KRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
|.+.+.||+|+||.||+|... +++.||||+++... .....+.+.+|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999965 68899999996542 222345677776665 456799999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++|+|..++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 99999999988775 345899999999999999999999996 9999999999999999999999999987432
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ..+
T Consensus 153 ~~~-------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~-----~~~------ 208 (324)
T cd05589 153 GFG-------------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD-----EEE------ 208 (324)
T ss_pred CCC-------------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-----HHH------
Confidence 111 11223579999999999999999999999999999999999999986321 111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
..+....... ..+ .....++.+++.+|++.||.+|| ++.+++++
T Consensus 209 ------~~~~i~~~~~--~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 209 ------VFDSIVNDEV--RYP-------RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred ------HHHHHHhCCC--CCC-------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 1111111111 011 12346788999999999999999 57777765
No 101
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.2e-35 Score=316.07 Aligned_cols=254 Identities=28% Similarity=0.462 Sum_probs=202.7
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
+|...+.||+|+||.||+|... +++.||+|.+.... .....+.+|++++++++||||+++++++...+..++||||+
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 4667889999999999999965 57889999986432 23567899999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.... ...+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 85 TYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 9999999886532 346899999999999999999999986 99999999999999999999999999986643211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......++..|+|||++.+..++.++||||||+++|||++ |..||... ...+.
T Consensus 160 ~------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~-----~~~~~-------- 214 (263)
T cd05052 160 T------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQV-------- 214 (263)
T ss_pred e------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHH--------
Confidence 1 1111234678999999999899999999999999999998 88887531 11111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.+. +........+ ..++.++.+++.+|++.+|++||++.|+.+.|+.+
T Consensus 215 ----~~~-~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 215 ----YEL-LEKGYRMERP-------EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ----HHH-HHCCCCCCCC-------CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 111 1110000011 12457899999999999999999999999999865
No 102
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.9e-35 Score=319.52 Aligned_cols=264 Identities=25% Similarity=0.372 Sum_probs=209.6
Q ss_pred hCCCCCCCccccCCcEeEEEEEECC-----CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEec-CCce
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQD-----NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSK-PDFK 739 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 739 (983)
.++|...+.||+|+||.||+|.+.. +..||+|.+...........+.+|++++++++||||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4578889999999999999999765 678999998755555556788999999999999999999998765 5678
Q ss_pred eEEEecccCcccccccccccCc----CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGL----SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
++++||+++++|.+++...... ...+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999998654321 146899999999999999999999986 999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCch
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSL 894 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l 894 (983)
|+++.+.+.... .......++..|+|||++.+..++.++||||||+++||+++ |+.||... +...+
T Consensus 162 g~~~~~~~~~~~-----------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~ 228 (280)
T cd05043 162 ALSRDLFPMDYH-----------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI--DPFEM 228 (280)
T ss_pred CCcccccCCceE-----------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC--CHHHH
Confidence 999866432211 01112246778999999998889999999999999999999 99998642 11111
Q ss_pred HHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 895 HEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
..++.. .... + ....++.++.+++.+||..+|++|||+.|+++.|+++.+.
T Consensus 229 ~~~~~~----------------~~~~--~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 229 AAYLKD----------------GYRL--A-----QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHHHc----------------CCCC--C-----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 111111 0000 0 0112456789999999999999999999999999998764
No 103
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.3e-35 Score=320.95 Aligned_cols=249 Identities=21% Similarity=0.293 Sum_probs=195.6
Q ss_pred cccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 675 IGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 675 iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
||+|+||+||++... +++.||+|.+...... ...+.+..|++++++++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999965 6889999998654321 2345678899999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++.........+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~----- 152 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS----- 152 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-----
Confidence 8877543333456899999999999999999999996 99999999999999999999999999976543221
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..... ...
T Consensus 153 --------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~------------~~~ 211 (280)
T cd05608 153 --------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKE------------LKQ 211 (280)
T ss_pred --------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc-hhHHH------------HHH
Confidence 112246899999999999999999999999999999999999998632110 00000 011
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
..... .... ....+.++.+++.+|++.||++|| ++++++++
T Consensus 212 ~~~~~--~~~~-------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 212 RILND--SVTY-------PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred hhccc--CCCC-------cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 10000 0000 122456788999999999999999 77888875
No 104
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-35 Score=333.53 Aligned_cols=213 Identities=23% Similarity=0.297 Sum_probs=175.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|+..+.||+|+||+||+|... +++.||||++.... ..+....+.+|++++.+++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999865 68899999996542 2223467888999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999874 346899999999999999999999996 99999999999999999999999999986543
Q ss_pred CcccccccC-------C-------CC--------ccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCC
Q 042568 824 IDESVNCAN-------D-------SM--------SFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGR 881 (983)
Q Consensus 824 ~~~~~~~~~-------~-------~~--------~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~ 881 (983)
......... + .. .........+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 211000000 0 00 0000112357999999999999999999999999999999999999
Q ss_pred CCCCc
Q 042568 882 RPTDV 886 (983)
Q Consensus 882 ~p~~~ 886 (983)
.||..
T Consensus 234 ~Pf~~ 238 (363)
T cd05628 234 PPFCS 238 (363)
T ss_pred CCCCC
Confidence 99863
No 105
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.8e-35 Score=351.28 Aligned_cols=276 Identities=24% Similarity=0.349 Sum_probs=207.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|.+.++||+|+||.||+|... +++.||||++..... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57889999999999999999965 588999999865432 234567999999999999999999999999999999999
Q ss_pred ecccCcccccccccccC-------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 744 PLMSNGSLENHLYPSHG-------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
||+++|+|.+++..... .....++..+++++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 99999999998764211 1234677888999999999999999996 9999999999999999999999999
Q ss_pred ccccccCCccccc---cc--CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCC
Q 042568 817 IAKLVKGIDESVN---CA--NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDG 891 (983)
Q Consensus 817 la~~~~~~~~~~~---~~--~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~ 891 (983)
+++.......... .. .............+||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-- 236 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-- 236 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch--
Confidence 9987632111100 00 0000011122345799999999999999999999999999999999999999864211
Q ss_pred CchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-CHHHHHHHHHHhHhh
Q 042568 892 SSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-SMLDVAHEMGRLKQY 968 (983)
Q Consensus 892 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~~~~~ 968 (983)
... .. ...+.. +... ..+.+.+..+.+++.+|++.||++|| +++++.+.|+...+.
T Consensus 237 ~ki---~~-----------~~~i~~--P~~~-----~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 237 RKI---SY-----------RDVILS--PIEV-----APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhh---hh-----------hhhccC--hhhc-----cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 000 00 000000 0000 00123556788999999999999995 677777888777543
No 106
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.7e-37 Score=332.89 Aligned_cols=246 Identities=25% Similarity=0.404 Sum_probs=197.2
Q ss_pred CCCccccCCcEeEEEEEEC-CCcEEE---EEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCc--eeEEEe
Q 042568 671 PSSLIGSGRFGHVYKGVLQ-DNTRIA---VKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDF--KALVLP 744 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~~-~~~~vA---vK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e 744 (983)
...+||+|+|-+||||.+. +|-.|| ||.-+.....+..++|..|+.+|+.|+||||+++|.+|.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3568999999999999965 466665 5554445555567899999999999999999999999987765 678899
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC-CCCEEEccccccccccC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE-DLTALVADFGIAKLVKG 823 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~-~~~~kl~Dfgla~~~~~ 823 (983)
.+..|+|..|..+. +.++...+..|++||++||.|||++.| +|||||||.+||+++. .|.|||+|.|+|+.+..
T Consensus 124 L~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 124 LFTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999999864 357888999999999999999999875 7999999999999985 58999999999998764
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. ...++|||.|||||+.. ..|++.+||||||++++||+|+.+||..-.+.
T Consensus 199 s~---------------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~------------- 249 (632)
T KOG0584|consen 199 SH---------------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP------------- 249 (632)
T ss_pred cc---------------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-------------
Confidence 22 23368999999999887 67999999999999999999999998643222
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+++.+.+.+..+..+... .-+++.++|.+|+.. .++|||+.|++++
T Consensus 250 ---AQIYKKV~SGiKP~sl~kV-------~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 250 ---AQIYKKVTSGIKPAALSKV-------KDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ---HHHHHHHHcCCCHHHhhcc-------CCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 1222222222222111111 125788999999999 9999999999863
No 107
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3e-35 Score=318.13 Aligned_cols=262 Identities=21% Similarity=0.313 Sum_probs=208.4
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|...+.||+|+||.||+|.. .+++.||||.+.... ......++.+|+++++.++||||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3677788999999999999995 578999999875432 2224567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++.........+++..++.++.|+++|++|||+.+ ++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999988643333456899999999999999999999996 99999999999999999999999999876542
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
... ......|+..|+|||+..+..++.++||||||+++|+|++|+.||.... .....+..
T Consensus 159 ~~~-------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~---- 218 (267)
T cd08229 159 KTT-------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCK---- 218 (267)
T ss_pred CCc-------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc---chHHHHhh----
Confidence 211 1122468899999999998889999999999999999999999985321 11111111
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
.+........ .+.....++.+++.+|++.+|++|||+.+|++.++++.
T Consensus 219 ---------~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 219 ---------KIEQCDYPPL------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ---------hhhcCCCCCC------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1111110000 01235678999999999999999999999999998863
No 108
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.2e-35 Score=337.45 Aligned_cols=266 Identities=20% Similarity=0.218 Sum_probs=198.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|...+.||+|+||.||+|... +++.||||++.... ..+..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999854 68899999986532 2234567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999998864 345889999999999999999999996 99999999999999999999999999975432
Q ss_pred Ccccccc---------cCC--CC--------c---------------cccccCccccccccccccccCCCCCCccchhHH
Q 042568 824 IDESVNC---------AND--SM--------S---------------FTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYS 869 (983)
Q Consensus 824 ~~~~~~~---------~~~--~~--------~---------------~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S 869 (983)
....... ... .. . ........+||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1110000 000 00 0 000001246999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCC
Q 042568 870 FGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNP 949 (983)
Q Consensus 870 lG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 949 (983)
+||++|||++|+.||..... .+. .............+. ......++.+++.+|+. +|
T Consensus 234 lGvil~elltG~~Pf~~~~~-----~~~------------~~~i~~~~~~~~~p~-----~~~~s~~~~dli~~lL~-~~ 290 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENS-----HET------------YRKIINWRETLYFPD-----DIHLSVEAEDLIRRLIT-NA 290 (377)
T ss_pred cchhhhhhhcCCCCCCCCCH-----HHH------------HHHHHccCCccCCCC-----CCCCCHHHHHHHHHHhc-CH
Confidence 99999999999999853211 111 111110000000110 01234678899999997 67
Q ss_pred CCC---CCHHHHHHHH
Q 042568 950 STR---PSMLDVAHEM 962 (983)
Q Consensus 950 ~~R---Ps~~evl~~L 962 (983)
.+| +++.|++++-
T Consensus 291 ~~r~~r~~~~~~l~hp 306 (377)
T cd05629 291 ENRLGRGGAHEIKSHP 306 (377)
T ss_pred hhcCCCCCHHHHhcCC
Confidence 665 6999999863
No 109
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.2e-35 Score=322.15 Aligned_cols=265 Identities=25% Similarity=0.387 Sum_probs=204.3
Q ss_pred CCCCCCCccccCCcEeEEEEEECC-----------------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD-----------------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRI 729 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 729 (983)
++|++.+.||+|+||.||+|.... +..||+|.+.........+.+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 578889999999999999998542 245899998766555556789999999999999999999
Q ss_pred eeEEecCCceeEEEecccCcccccccccccC-------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCe
Q 042568 730 ITICSKPDFKALVLPLMSNGSLENHLYPSHG-------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNI 802 (983)
Q Consensus 730 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~Ni 802 (983)
++++...+..++|+||+++++|.+++..... ....+++..++.++.|+++||+|||+.+ |+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhce
Confidence 9999998999999999999999998865431 1236899999999999999999999986 99999999999
Q ss_pred EeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh--C
Q 042568 803 LLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT--G 880 (983)
Q Consensus 803 Ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt--g 880 (983)
+++.++.++|+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 230 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYY-----------RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCR 230 (296)
T ss_pred eecCCCceEEccccceeecccCcce-----------eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCC
Confidence 9999999999999998765432111 11223456789999999998889999999999999999998 6
Q ss_pred CCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 881 RRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 881 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
..||..... .+ .++...........+... .....++.++.+++.+|++.||++|||+.|+++
T Consensus 231 ~~p~~~~~~-----~~------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 231 EQPYEHLTD-----QQ------------VIENAGHFFRDDGRQIYL-PRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CCCCCCcCh-----HH------------HHHHHHhccccccccccC-CCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 677653210 01 111111000000000000 001124468999999999999999999999999
Q ss_pred HHH
Q 042568 961 EMG 963 (983)
Q Consensus 961 ~L~ 963 (983)
.|+
T Consensus 293 ~L~ 295 (296)
T cd05051 293 FLQ 295 (296)
T ss_pred Hhc
Confidence 885
No 110
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.8e-35 Score=330.21 Aligned_cols=261 Identities=26% Similarity=0.379 Sum_probs=204.1
Q ss_pred CCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCcee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 740 (983)
+|...+.||+|+||.||+|.+. .+..||||+++..........+.+|++++.++. ||||+++++++...+..+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~ 117 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY 117 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence 4667889999999999999864 245799999976554444567899999999997 999999999999999999
Q ss_pred EEEecccCcccccccccccC------------------------------------------------------------
Q 042568 741 LVLPLMSNGSLENHLYPSHG------------------------------------------------------------ 760 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~------------------------------------------------------------ 760 (983)
+|+||+++|+|.++++....
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 99999999999998864321
Q ss_pred ----------------------------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC
Q 042568 761 ----------------------------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE 806 (983)
Q Consensus 761 ----------------------------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~ 806 (983)
....+++..++.++.|+++||+|||+.+ |+||||||+||++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~~ 274 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLICE 274 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEEeC
Confidence 1124778889999999999999999985 999999999999999
Q ss_pred CCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 042568 807 DLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTD 885 (983)
Q Consensus 807 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~ 885 (983)
++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNY-----------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred CCEEEEEecCcceeccccccc-----------ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999865322111 01112357889999999998889999999999999999998 888975
Q ss_pred cccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 886 VLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 886 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.... .+.....+........+ ..+..++.+++.+||..+|++||+++|+++.|+++
T Consensus 344 ~~~~-----------------~~~~~~~~~~~~~~~~p-------~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 344 ELPM-----------------NEQFYNAIKRGYRMAKP-------AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred CCCc-----------------hHHHHHHHHcCCCCCCC-------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 3210 01111111111100011 12456889999999999999999999999999876
Q ss_pred H
Q 042568 966 K 966 (983)
Q Consensus 966 ~ 966 (983)
.
T Consensus 400 ~ 400 (401)
T cd05107 400 L 400 (401)
T ss_pred h
Confidence 4
No 111
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5.8e-35 Score=319.83 Aligned_cols=261 Identities=27% Similarity=0.400 Sum_probs=204.1
Q ss_pred CCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
+|...+.||+|+||.||+|... ....+|+|.+..........++.+|+++++.++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 3677899999999999999853 2356899988655544445789999999999999999999999999999999
Q ss_pred EEecccCcccccccccccC--------------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCC
Q 042568 742 VLPLMSNGSLENHLYPSHG--------------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSN 801 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~N 801 (983)
++||+++++|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 9999999999988754211 1235889999999999999999999986 9999999999
Q ss_pred eEeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-C
Q 042568 802 ILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-G 880 (983)
Q Consensus 802 iLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g 880 (983)
|++++++.+||+|||+++........ .......++..|+|||...+..++.++||||||+++|||++ |
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g 226 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY-----------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 226 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch-----------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcC
Confidence 99999999999999999865432211 01112245678999999988889999999999999999999 9
Q ss_pred CCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 881 RRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 881 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
+.||.... ...+.++ +........+ ..+..++.+++.+|++.+|++||+++|+++
T Consensus 227 ~~p~~~~~--~~~~~~~----------------~~~~~~~~~~-------~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 227 GNPYPGIA--PERLFNL----------------LKTGYRMERP-------ENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCCCCCCC--HHHHHHH----------------HhCCCCCCCC-------CCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 99975321 0011111 1110000001 124467889999999999999999999999
Q ss_pred HHHHhHh
Q 042568 961 EMGRLKQ 967 (983)
Q Consensus 961 ~L~~~~~ 967 (983)
.|+++..
T Consensus 282 ~l~~~~~ 288 (290)
T cd05045 282 ELEKMMV 288 (290)
T ss_pred HHHHHHh
Confidence 9998754
No 112
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.3e-35 Score=322.50 Aligned_cols=265 Identities=23% Similarity=0.336 Sum_probs=200.6
Q ss_pred CCCCCCCccccCCcEeEEEEEECC---------------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceee
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD---------------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIIT 731 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~---------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 731 (983)
++|.+.+.||+|+||.||++.... ...||+|.+...........|.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 478889999999999999987542 12489999875544445678999999999999999999999
Q ss_pred EEecCCceeEEEecccCcccccccccccC--------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeE
Q 042568 732 ICSKPDFKALVLPLMSNGSLENHLYPSHG--------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNIL 803 (983)
Q Consensus 732 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiL 803 (983)
++......++||||+++++|.+++..... ....+++..++.++.|+++|++|||+.+ ++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 99999999999999999999998854321 1124788999999999999999999996 999999999999
Q ss_pred eCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh--CC
Q 042568 804 LDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT--GR 881 (983)
Q Consensus 804 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt--g~ 881 (983)
++.++.+||+|||++......... .......++..|+|||...+..++.++||||||+++|+|++ |.
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~ 230 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYY-----------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKE 230 (295)
T ss_pred EcCCCcEEecccccccccccCcce-----------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCC
Confidence 999999999999999765322110 11122346789999999998889999999999999999998 55
Q ss_pred CCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 882 RPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 882 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.||..... .+.+... .+..+......... .....+..+.+++.+|++.+|++||++.+|++.
T Consensus 231 ~p~~~~~~-----~~~~~~~-----~~~~~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~ 292 (295)
T cd05097 231 QPYSLLSD-----EQVIENT-----GEFFRNQGRQIYLS--------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHF 292 (295)
T ss_pred CCCcccCh-----HHHHHHH-----HHhhhhccccccCC--------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 66653211 0111000 00000000000000 011245689999999999999999999999998
Q ss_pred HH
Q 042568 962 MG 963 (983)
Q Consensus 962 L~ 963 (983)
|+
T Consensus 293 l~ 294 (295)
T cd05097 293 LR 294 (295)
T ss_pred Hh
Confidence 86
No 113
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.4e-35 Score=323.42 Aligned_cols=265 Identities=28% Similarity=0.390 Sum_probs=207.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC--------CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCC
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ--------DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPD 737 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 737 (983)
++|.+.+.||+|+||.||+|... +...||+|.++.........++.+|+++++++ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 46888999999999999999853 23469999997654444456788999999999 7999999999999999
Q ss_pred ceeEEEecccCcccccccccccC------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeC
Q 042568 738 FKALVLPLMSNGSLENHLYPSHG------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLD 805 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~ 805 (983)
..++||||+++|+|.+++..... ....+++..+++++.|+++||+|||+.+ ++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEEc
Confidence 99999999999999999875421 1235899999999999999999999986 99999999999999
Q ss_pred CCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 042568 806 EDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPT 884 (983)
Q Consensus 806 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~ 884 (983)
.++.++|+|||.++........ .......++..|+|||...+..++.++|||||||++|||++ |+.||
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~ 243 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYY-----------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243 (307)
T ss_pred CCCcEEECCCcccccccccchh-----------hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999998765421110 00111124568999999998889999999999999999998 88887
Q ss_pred CcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 885 DVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 885 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
... ...+... .+........ ...+..++.+++.+|+..+|++||++.++++.|++
T Consensus 244 ~~~-----~~~~~~~-------------~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~ 298 (307)
T cd05098 244 PGV-----PVEELFK-------------LLKEGHRMDK-------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 298 (307)
T ss_pred CcC-----CHHHHHH-------------HHHcCCCCCC-------CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 421 1111111 1111111011 12245688899999999999999999999999999
Q ss_pred hHhhcC
Q 042568 965 LKQYLS 970 (983)
Q Consensus 965 ~~~~~~ 970 (983)
+.+...
T Consensus 299 ~~~~~~ 304 (307)
T cd05098 299 ILALTS 304 (307)
T ss_pred HHHHhh
Confidence 877644
No 114
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.3e-35 Score=320.22 Aligned_cols=262 Identities=27% Similarity=0.414 Sum_probs=206.2
Q ss_pred CCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
+|...+.||+|+||.||+|+.. ++..+|+|.++.... ...+.+.+|++++++++|+||+++++++...+..++
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 4667889999999999999843 345589998854432 234678999999999999999999999999999999
Q ss_pred EEecccCcccccccccccC------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCC
Q 042568 742 VLPLMSNGSLENHLYPSHG------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLT 809 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~ 809 (983)
||||+++++|.+++..... ....+++..++.++.|+++|++|||+++ |+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 9999999999999865321 1235899999999999999999999996 999999999999999999
Q ss_pred EEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCccc
Q 042568 810 ALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLF 888 (983)
Q Consensus 810 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~ 888 (983)
++|+|||+++........ .......|+..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 162 ~~l~dfg~a~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 230 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYY-----------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 230 (291)
T ss_pred EEECCCCcccccCCCcee-----------ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999765432110 11122457889999999999999999999999999999999 999985421
Q ss_pred CCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 889 HDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 889 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
. .+ .++......... . ...++..+.+++.+|++.+|++||++++|+++|+++.+.
T Consensus 231 ~-----~~------------~~~~~~~~~~~~-~-------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 231 N-----TE------------VIECITQGRVLE-R-------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred H-----HH------------HHHHHhCCCCCC-C-------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1 11 111111110100 0 012456789999999999999999999999999999765
Q ss_pred c
Q 042568 969 L 969 (983)
Q Consensus 969 ~ 969 (983)
.
T Consensus 286 ~ 286 (291)
T cd05094 286 T 286 (291)
T ss_pred c
Confidence 3
No 115
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.8e-35 Score=318.48 Aligned_cols=253 Identities=24% Similarity=0.364 Sum_probs=200.2
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
+|...++||+|+||.||+|.. .+++.||+|.+......+...++.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 567789999999999999995 4688899999876544445577999999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
+++++..+. .+++..+..++.|++.|++|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-- 148 (279)
T cd06619 82 DGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-- 148 (279)
T ss_pred CCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence 999986542 3678889999999999999999996 999999999999999999999999999755321
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
......||..|+|||++.+..++.++||||||+++|+|++|+.||........... .
T Consensus 149 -------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~----------~ 205 (279)
T cd06619 149 -------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM----------P 205 (279)
T ss_pred -------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc----------h
Confidence 11224689999999999998999999999999999999999999865332211100 0
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
..... .+........+ ......++.+++.+|++.+|++||+++|++++-.
T Consensus 206 ~~~~~-~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 206 LQLLQ-CIVDEDPPVLP------VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred HHHHH-HHhccCCCCCC------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence 00011 11110111010 1123457889999999999999999999998743
No 116
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.2e-35 Score=339.96 Aligned_cols=271 Identities=22% Similarity=0.299 Sum_probs=193.3
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecC--------
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKP-------- 736 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 736 (983)
.++|...++||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 457999999999999999999964 68899999884322 2345799999999999999999886432
Q ss_pred CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC-CEEEccc
Q 042568 737 DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL-TALVADF 815 (983)
Q Consensus 737 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~-~~kl~Df 815 (983)
...++||||+++ ++.+++.........+++..++.++.|+++||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence 245689999985 676666533323456899999999999999999999996 99999999999999665 7999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCch
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSL 894 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l 894 (983)
|+|+.+..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+
T Consensus 216 Gla~~~~~~~~--------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~-~~~~ 280 (440)
T PTZ00036 216 GSAKNLLAGQR--------------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS-VDQL 280 (440)
T ss_pred ccchhccCCCC--------------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHH
Confidence 99986543211 1124689999999998764 689999999999999999999999864211 1112
Q ss_pred HHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccch-----HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 895 HEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVW-----SDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...+...-.+. .+.....-........+......+ ...+.++.+++.+|+++||++|||+.|++++
T Consensus 281 ~~i~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 281 VRIIQVLGTPT-EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHHhCCCC-HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 22221111111 010100000000000111000001 1234678999999999999999999999965
No 117
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-34 Score=311.34 Aligned_cols=250 Identities=26% Similarity=0.419 Sum_probs=196.2
Q ss_pred ccccCCcEeEEEEEEC---CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcc
Q 042568 674 LIGSGRFGHVYKGVLQ---DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGS 750 (983)
Q Consensus 674 ~iG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 750 (983)
.||+|+||.||+|.+. ++..||+|++.........+.+.+|++++++++||||+++++++.. +..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999864 3456999998765554456779999999999999999999998854 56799999999999
Q ss_pred cccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccc
Q 042568 751 LENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNC 830 (983)
Q Consensus 751 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~ 830 (983)
|.+++... ...+++..+++++.|+++|++|||+++ ++||||||+||+++.++.+||+|||+++.........
T Consensus 81 L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~-- 152 (257)
T cd05115 81 LNKFLSGK---KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY-- 152 (257)
T ss_pred HHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccce--
Confidence 99988643 346899999999999999999999986 9999999999999999999999999998654322110
Q ss_pred cCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcHH
Q 042568 831 ANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDPI 909 (983)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 909 (983)
.......++..|+|||...+..++.++||||||+++||+++ |+.||..... ...
T Consensus 153 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~--------------- 207 (257)
T cd05115 153 --------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--PEV--------------- 207 (257)
T ss_pred --------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--HHH---------------
Confidence 01111234678999999988889999999999999999996 9999864311 001
Q ss_pred HHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 910 VEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
...+........+ ..++.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 208 -~~~~~~~~~~~~~-------~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 208 -MSFIEQGKRLDCP-------AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -HHHHHCCCCCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1111111111111 12457888999999999999999999999999865
No 118
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.6e-35 Score=321.45 Aligned_cols=257 Identities=25% Similarity=0.392 Sum_probs=201.3
Q ss_pred CCCCCccccCCcEeEEEEEECC------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQD------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
|...+.||+|+||.||+|...+ +..||+|+++........+.+.+|+++++.++||||+++++++......+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 4456789999999999998642 4679999997655444567789999999999999999999999999999999
Q ss_pred EecccCccccccccccc------------CcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCE
Q 042568 743 LPLMSNGSLENHLYPSH------------GLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTA 810 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~ 810 (983)
+||+++++|.+++.... .....+++..+..++.|+++||+|+|+.+ |+||||||+||++++++.+
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCce
Confidence 99999999998875321 11235889999999999999999999996 9999999999999999999
Q ss_pred EEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccC
Q 042568 811 LVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFH 889 (983)
Q Consensus 811 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~ 889 (983)
||+|||+++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 164 kl~Dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~- 231 (283)
T cd05091 164 KISDLGLFREVYAADYY-----------KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS- 231 (283)
T ss_pred Eecccccccccccchhe-----------eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC-
Confidence 99999998865432211 11122346789999999988889999999999999999998 777875321
Q ss_pred CCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 890 DGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 890 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
..+ ..+....... ... ..+++..+.+++.+|++.+|++||+++++++.|+.
T Consensus 232 ----~~~------------~~~~i~~~~~-~~~-------~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 232 ----NQD------------VIEMIRNRQV-LPC-------PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred ----HHH------------HHHHHHcCCc-CCC-------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111 1111111110 000 12355678999999999999999999999998864
No 119
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=8.4e-35 Score=313.40 Aligned_cols=254 Identities=30% Similarity=0.458 Sum_probs=202.3
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
++|++.++||+|+||.||+|.+.++..||+|.++.... ..+++.+|++++++++||||+++++++. .+..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 56888999999999999999987777899999865332 2467899999999999999999999875 45679999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++|+|.+++.... ...+++..+..++.|+++||+|+|+.+ ++||||||+||++++++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 83 SKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCCcHHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 9999999997532 345789999999999999999999986 99999999999999999999999999986643221
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......++..|+|||+..+..++.++||||||+++|||++ |+.||.....
T Consensus 158 ~------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~---------------- 209 (262)
T cd05071 158 T------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 209 (262)
T ss_pred c------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh----------------
Confidence 1 1112346778999999998889999999999999999999 8888753211
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
....+..... ... + ...+.+..+.+++.+|++.+|++||+++++++.|+..
T Consensus 210 -~~~~~~~~~~-~~~--~-----~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 210 -REVLDQVERG-YRM--P-----CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -HHHHHHHhcC-CCC--C-----CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0111111111 000 0 0123567789999999999999999999999998864
No 120
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=8.9e-36 Score=331.42 Aligned_cols=243 Identities=23% Similarity=0.282 Sum_probs=194.2
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCc
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
+.||+|+||.||++... +++.||+|+++... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999954 68899999997543 2223567788999999999999999999999999999999999999
Q ss_pred ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 750 SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHH-HSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 750 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
+|.+++.. ...+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--- 150 (325)
T cd05594 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--- 150 (325)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC---
Confidence 99888764 3458999999999999999999997 54 9999999999999999999999999987532111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-----~~~~----------- 204 (325)
T cd05594 151 ----------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKL----------- 204 (325)
T ss_pred ----------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC-----HHHH-----------
Confidence 11123469999999999999999999999999999999999999985321 1111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
....... ....+ .....++.+++.+|++.||++|+ ++++++++
T Consensus 205 -~~~i~~~--~~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 205 -FELILME--EIRFP-------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred -HHHHhcC--CCCCC-------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 1111100 00111 11346788999999999999996 89999876
No 121
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9e-36 Score=335.68 Aligned_cols=265 Identities=24% Similarity=0.277 Sum_probs=205.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|.+.+.||+|+||.||+|... +++.||||+++... .......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999965 68899999997543 2234567899999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999998753 46899999999999999999999986 99999999999999999999999999987654
Q ss_pred CcccccccC----------------CCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcc
Q 042568 824 IDESVNCAN----------------DSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVL 887 (983)
Q Consensus 824 ~~~~~~~~~----------------~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~ 887 (983)
......... .............||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 320000000 0000011223457999999999999999999999999999999999999998642
Q ss_pred cCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC-HHHHHHH
Q 042568 888 FHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS-MLDVAHE 961 (983)
Q Consensus 888 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~ 961 (983)
. . .. ..............+.. ...+.++.+++.+|+. +|++||+ ++|++++
T Consensus 234 ~----~-~~------------~~~~i~~~~~~~~~p~~-----~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 T----L-QE------------TYNKIINWKESLRFPPD-----PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred C----H-HH------------HHHHHhccCCcccCCCC-----CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 1 0 01 11111110000011110 1145678899999997 9999999 9999986
No 122
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=5.9e-38 Score=336.97 Aligned_cols=365 Identities=30% Similarity=0.464 Sum_probs=202.7
Q ss_pred cCCCCcEEeCcCCcCC-CCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCcc
Q 042568 99 NLSSLIVLDLSKNFFQ-GHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTS 177 (983)
Q Consensus 99 ~l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 177 (983)
-|+..+-.|+++|.|+ +..|.+...+++++.|.|.+.++. .+|..++.|.+|++|.+++|++. .+-..+ +.++.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGEL---s~Lp~ 79 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGEL---SDLPR 79 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhh---ccchh
Confidence 3566667788888888 468888888888888888888887 88888888888888888888887 333222 34555
Q ss_pred cceeecccccccCC-CCCcccccccccceeecccCccccccchhhhccCCcceecccccccccccchhhhcCCCCccEEE
Q 042568 178 LQYIDLSNNSLTGE-IPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLY 256 (983)
Q Consensus 178 L~~L~Ls~N~l~~~-ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 256 (983)
|+.+.+.+|++... ||...| .+..|..|+|++|+++ ..|..+...+++-.|+||+|+|. .||..++-+++.|-+||
T Consensus 80 LRsv~~R~N~LKnsGiP~diF-~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLD 156 (1255)
T KOG0444|consen 80 LRSVIVRDNNLKNSGIPTDIF-RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLD 156 (1255)
T ss_pred hHHHhhhccccccCCCCchhc-ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhc
Confidence 55555555555432 333322 4555555555555555 45555555555555555555554 55555444444333333
Q ss_pred ccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEE
Q 042568 257 LSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLL 336 (983)
Q Consensus 257 Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 336 (983)
||+| ++. .+|+.+..+.+|++|
T Consensus 157 LS~N---------------------------------------------------------rLe-~LPPQ~RRL~~LqtL 178 (1255)
T KOG0444|consen 157 LSNN---------------------------------------------------------RLE-MLPPQIRRLSMLQTL 178 (1255)
T ss_pred cccc---------------------------------------------------------hhh-hcCHHHHHHhhhhhh
Confidence 3333 332 344445555555555
Q ss_pred eccccccCCCCCcccccCCCCcEEEeeCCccc-CCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhcccCccC
Q 042568 337 NLSSNLLNGTIPHELCLMSKLERVYLSNNSLS-GEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHL 415 (983)
Q Consensus 337 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 415 (983)
+|++|.+...-...+-.|++|+.|.+++.+=+ .-+|.++..+.+|..+|||.|.+. ..|+.+.++++|+.|+||+|.|
T Consensus 179 ~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~i 257 (1255)
T KOG0444|consen 179 KLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKI 257 (1255)
T ss_pred hcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCce
Confidence 55555544222222333444555555554322 234555555555555555555554 4555555555555555555555
Q ss_pred CCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCCC-CCCccccccccccccccccccccccCCCc
Q 042568 416 SGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLD-GPLPLELSKMDMVLAIDLSFNNLSGSIPP 494 (983)
Q Consensus 416 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 494 (983)
+ .+.-..+...+|++|+||+|+++ .+|..++.++.|+. |++.+|+++ .-+|..++.+.+|+.+..++|++. .+|+
T Consensus 258 t-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~k-Ly~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPE 333 (1255)
T KOG0444|consen 258 T-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTK-LYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPE 333 (1255)
T ss_pred e-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHH-HHhccCcccccCCccchhhhhhhHHHHhhccccc-cCch
Confidence 5 33333444455555555555555 45555555555554 555555554 124455555555555555555554 4455
Q ss_pred ccccccccceEEeCCCcccccccccccCCCCccEEecCCcc
Q 042568 495 QLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNR 535 (983)
Q Consensus 495 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 535 (983)
.++.|..|+.|.|++|++- .+|+.+--|+.|+.||+..|.
T Consensus 334 glcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 334 GLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred hhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 5555555555555555554 344444444555555555443
No 123
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.2e-35 Score=313.25 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=200.3
Q ss_pred CCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
+|...+.||+|+||.||+|.+.++..||||.+..... ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4677889999999999999987777899998864332 24678999999999999999999999998888999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||.++........
T Consensus 83 ~~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 83 NGCLLNYLREHG---KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred CCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 999999886432 35899999999999999999999996 999999999999999999999999998765432110
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
......++..|+|||+..+..++.++||||||+++|||++ |+.||.....
T Consensus 157 ------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~----------------- 207 (256)
T cd05113 157 ------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN----------------- 207 (256)
T ss_pred ------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH-----------------
Confidence 0111235678999999998889999999999999999999 9999853211
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
....+........ ..+ ...+.++.+++.+||+.+|++||++.++++.++
T Consensus 208 ~~~~~~~~~~~~~-~~~-------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 208 SETVEKVSQGLRL-YRP-------HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHHHhcCCCC-CCC-------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0111111111111 001 113467899999999999999999999998763
No 124
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.9e-35 Score=321.50 Aligned_cols=264 Identities=26% Similarity=0.381 Sum_probs=207.3
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC--------CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecC
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ--------DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKP 736 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 736 (983)
.++|.+.+.||+|+||.||+|+.. ++..||+|.+...........+.+|+++++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 346778899999999999999742 24469999986554444567899999999999 899999999999999
Q ss_pred CceeEEEecccCcccccccccccC------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEe
Q 042568 737 DFKALVLPLMSNGSLENHLYPSHG------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILL 804 (983)
Q Consensus 737 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl 804 (983)
...++||||+++|+|.+++..... ....+++..+..++.|+++||+|||+.+ |+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence 999999999999999999875321 1235889999999999999999999996 9999999999999
Q ss_pred CCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCC
Q 042568 805 DEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRP 883 (983)
Q Consensus 805 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p 883 (983)
++++.+||+|||.++........ .......++..|+|||...+..++.++||||||+++|||++ |..|
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p 239 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYY-----------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 239 (304)
T ss_pred cCCCcEEECCCccceeccccccc-----------ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 99999999999999866432211 11112246678999999998889999999999999999998 7777
Q ss_pred CCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 884 TDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 884 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
|... ...++.. . +........ ...++.++.+++.+|++.+|++||++.|+++.|+
T Consensus 240 ~~~~-----~~~~~~~------------~-~~~~~~~~~-------~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~ 294 (304)
T cd05101 240 YPGI-----PVEELFK------------L-LKEGHRMDK-------PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLD 294 (304)
T ss_pred cccC-----CHHHHHH------------H-HHcCCcCCC-------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 6431 1111111 1 111110000 1235578899999999999999999999999999
Q ss_pred HhHhh
Q 042568 964 RLKQY 968 (983)
Q Consensus 964 ~~~~~ 968 (983)
++...
T Consensus 295 ~~~~~ 299 (304)
T cd05101 295 RILTL 299 (304)
T ss_pred HHHHh
Confidence 88654
No 125
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=8.7e-35 Score=319.91 Aligned_cols=259 Identities=24% Similarity=0.371 Sum_probs=204.8
Q ss_pred CCCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFK 739 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 739 (983)
++|...+.||+|+||.||+|... ++..||||.++........+.+.+|+++++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 46888999999999999999742 24579999987654444567899999999999 799999999999999999
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++||||+++|+|.+++.... ...+++.++..++.|++.|++|||+.+ |+|+||||+||+++.++.++++|||+++
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence 99999999999999987432 234899999999999999999999986 9999999999999999999999999998
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~ 898 (983)
........ .......++..|+|||.+.+..++.++||||+||++|||++ |+.||......
T Consensus 190 ~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-------- 250 (302)
T cd05055 190 DIMNDSNY-----------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-------- 250 (302)
T ss_pred cccCCCce-----------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--------
Confidence 65432111 01122346788999999999899999999999999999998 99998642110
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
+...+.+........+ ...+.++.+++.+|+..+|++||++.|+++.|+++
T Consensus 251 ---------~~~~~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 251 ---------SKFYKLIKEGYRMAQP-------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ---------HHHHHHHHcCCcCCCC-------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0111111111110001 11346789999999999999999999999999875
No 126
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=8.4e-35 Score=314.58 Aligned_cols=262 Identities=22% Similarity=0.326 Sum_probs=209.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|+..+.||+|+||.||+|... +++.||+|.++... .....+++.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999976 78999999886432 2233578999999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++.........+++..++.++.|+++|++|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999888654333456899999999999999999999986 99999999999999999999999999876542
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
... ......|+..|+|||...+..++.++||||||+++|+|++|+.||... .....++..
T Consensus 159 ~~~-------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~---~~~~~~~~~---- 218 (267)
T cd08224 159 KTT-------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD---KMNLYSLCK---- 218 (267)
T ss_pred CCc-------------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC---CccHHHHHh----
Confidence 211 111235888999999999888999999999999999999999998532 111111111
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
........ ..+ .......+.+++.+|+..+|++||++.++++.++.+.
T Consensus 219 --------~~~~~~~~-~~~------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 219 --------KIEKCDYP-PLP------ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --------hhhcCCCC-CCC------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 11111000 001 1234567889999999999999999999999998874
No 127
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.1e-35 Score=324.03 Aligned_cols=274 Identities=22% Similarity=0.285 Sum_probs=201.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|...+.||+|+||.||+|... +++.||+|.++..........+.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999965 67889999987655444456788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++ ++.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 985 777776543 345789999999999999999999996 9999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. ......+|+.|+|||.+.+ ..++.++||||+|+++|||++|+.||..... ...+.. +......
T Consensus 159 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~-~~~~~~-~~~~~~~ 223 (309)
T cd07872 159 K-------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV-EDELHL-IFRLLGT 223 (309)
T ss_pred c-------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHH-HHHHhCC
Confidence 1 1112357899999998865 4678999999999999999999999864211 111111 1111111
Q ss_pred CCcHHHHHH-----Hh-hcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 905 RLDPIVEKA-----IA-KYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 905 ~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
...+..... .. ...+...+............++.+++.+|++.||++|||++|++++-
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 287 (309)
T cd07872 224 PTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA 287 (309)
T ss_pred CCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence 111110000 00 00000000000011123456789999999999999999999999754
No 128
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8e-35 Score=326.05 Aligned_cols=264 Identities=27% Similarity=0.387 Sum_probs=202.7
Q ss_pred CCCCCCCccccCCcEeEEEEEE------CCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecC-Cc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL------QDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKP-DF 738 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 738 (983)
++|...+.||+|+||.||+|.. .+++.||||+++..........+.+|++++.++ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 5788899999999999999973 346789999997654444456788999999999 689999999988654 45
Q ss_pred eeEEEecccCcccccccccccC----------------------------------------------------------
Q 042568 739 KALVLPLMSNGSLENHLYPSHG---------------------------------------------------------- 760 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 760 (983)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 6899999999999988754211
Q ss_pred -----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCC
Q 042568 761 -----LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSM 835 (983)
Q Consensus 761 -----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~ 835 (983)
....+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++.........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------- 235 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-------- 235 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcch--------
Confidence 0124788899999999999999999986 999999999999999999999999999865322111
Q ss_pred ccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHH
Q 042568 836 SFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAI 914 (983)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 914 (983)
.......++..|+|||...+..++.++||||||+++|||++ |..||...... ..+...+
T Consensus 236 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----------------~~~~~~~ 295 (343)
T cd05103 236 ---VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-----------------EEFCRRL 295 (343)
T ss_pred ---hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-----------------HHHHHHH
Confidence 11112346678999999988889999999999999999997 88887532111 0111111
Q ss_pred hhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 915 AKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
........+. ....++.+++.+||+.+|++|||+.|++++|+.+.+.
T Consensus 296 ~~~~~~~~~~-------~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 296 KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred hccCCCCCCC-------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1111111111 1235688999999999999999999999999988653
No 129
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.9e-35 Score=327.65 Aligned_cols=243 Identities=24% Similarity=0.337 Sum_probs=193.2
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
++||+|+||.||+|+.. +++.||||++.... .....+.+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 57889999986542 223456778899998877 699999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--- 150 (320)
T cd05590 81 GDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--- 150 (320)
T ss_pred chHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---
Confidence 999988864 345899999999999999999999996 9999999999999999999999999987532111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ....
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~----------- 204 (320)
T cd05590 151 ----------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN-----EDDL----------- 204 (320)
T ss_pred ----------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHH-----------
Confidence 11123469999999999999999999999999999999999999986321 1111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH------HHHHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM------LDVAHE 961 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~evl~~ 961 (983)
.+....... ..+ .....++.+++.+|++.||++||++ ++++++
T Consensus 205 -~~~i~~~~~--~~~-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 205 -FEAILNDEV--VYP-------TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred -HHHHhcCCC--CCC-------CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 111111100 011 1134678899999999999999998 666654
No 130
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=323.12 Aligned_cols=243 Identities=26% Similarity=0.379 Sum_probs=200.7
Q ss_pred CCccccCCcEeEEEEEE-CCCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 672 SSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
.+.||.|+||.||-|++ .+.+.||||.+.... ..+...++.+|+.++++++|||++.+-|+|-.....|+|||||-
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl- 109 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL- 109 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-
Confidence 45699999999999994 578889999986543 23456789999999999999999999999999999999999996
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
||-.|.+.-. ++++.+-++..|+.+.++||+|||+.+ .||||||+.|||+++.|.||++|||.|.++.+.
T Consensus 110 GSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA---- 179 (948)
T KOG0577|consen 110 GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPA---- 179 (948)
T ss_pred ccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCch----
Confidence 5877877644 567889999999999999999999996 999999999999999999999999999887543
Q ss_pred cccCCCCccccccCccccccccccccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGM---GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
..++|||.|||||++. .+.|+-|+||||+|++..|+...++|+-.+-
T Consensus 180 -------------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN----------------- 229 (948)
T KOG0577|consen 180 -------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----------------- 229 (948)
T ss_pred -------------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch-----------------
Confidence 3368999999999875 4789999999999999999999999964321
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.-..+-.+.....|......|.+.+.. ++..|++.-|.+|||.+++++|-
T Consensus 230 ----AMSALYHIAQNesPtLqs~eWS~~F~~---Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 230 ----AMSALYHIAQNESPTLQSNEWSDYFRN---FVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred ----HHHHHHHHHhcCCCCCCCchhHHHHHH---HHHHHHhhCcccCCcHHHHhhcc
Confidence 111222333444566666677766555 45559999999999999998764
No 131
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-35 Score=329.45 Aligned_cols=253 Identities=23% Similarity=0.352 Sum_probs=198.1
Q ss_pred CCCCCCccccCCcEeEEEEEEC----CCcEEEEEEeeccc---CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCce
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ----DNTRIAVKVLDLTT---TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFK 739 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 739 (983)
+|++.+.||+|+||.||+++.. +++.||+|++.... .....+.+.+|+++++++ +|++|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778899999999999998853 57889999986532 222346788899999999 599999999999999999
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 999999999999998864 345889999999999999999999996 9999999999999999999999999997
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ...
T Consensus 154 ~~~~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~---- 216 (332)
T cd05614 154 EFLSEEK------------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER-NTQ---- 216 (332)
T ss_pred cccccCC------------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC-CCH----
Confidence 6532211 111234699999999998875 4788999999999999999999998632111 111
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
..+...+..... ..+ ......+.+++.+|++.||++|| ++++++++
T Consensus 217 ---------~~~~~~~~~~~~-~~~-------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 217 ---------SEVSRRILKCDP-PFP-------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred ---------HHHHHHHhcCCC-CCC-------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 111111111111 111 12446788999999999999999 78888865
No 132
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.7e-35 Score=311.89 Aligned_cols=250 Identities=28% Similarity=0.418 Sum_probs=199.5
Q ss_pred CCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
+|+..+.||+|+||.||+|.+.++..+|+|.+..... ....+.+|++++++++||||+++++++...+..++|+||++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM--SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 4677889999999999999988778899999854332 24678899999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+++|.+++.... ..+++..++.++.|+++|++|||+.+ |+||||||+||+++.++.+||+|||.++........
T Consensus 83 ~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 83 NGCLLNYLRERK---GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred CCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 999999886432 35899999999999999999999996 999999999999999999999999999865422110
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
......++..|+|||+..+..++.++||||||+++|||++ |+.||+.... .
T Consensus 157 ------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~-------------- 208 (256)
T cd05059 157 ------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--S-------------- 208 (256)
T ss_pred ------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--H--------------
Confidence 0011124567999999999899999999999999999999 8888863211 0
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
+..+. +........+ ..++.++.+++.+|+..+|++|||+.|+++.|
T Consensus 209 -~~~~~-~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 209 -EVVES-VSAGYRLYRP-------KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -HHHHH-HHcCCcCCCC-------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 01111 1111110011 12456899999999999999999999999876
No 133
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2e-35 Score=333.75 Aligned_cols=254 Identities=20% Similarity=0.223 Sum_probs=199.6
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
.++|+..+.||+|+||.||+|+.. +++.||+|+++... .....+.+.+|+++++.++||||+++++++......++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 457888999999999999999965 68889999986532 122345678899999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 122 MEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 999999999998863 34788889999999999999999996 9999999999999999999999999998654
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCC----CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK----RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.... ...
T Consensus 194 ~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~-- 254 (370)
T cd05596 194 ANGM------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVG-- 254 (370)
T ss_pred CCCc------------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC-----HHH--
Confidence 2211 111234699999999998653 47899999999999999999999986321 111
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCC--CCCHHHHHHH
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPST--RPSMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 961 (983)
..............+. ....+.++.+++.+|++.+|.+ ||+++|++++
T Consensus 255 ----------~~~~i~~~~~~~~~~~-----~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 255 ----------TYSKIMDHKNSLTFPD-----DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ----------HHHHHHcCCCcCCCCC-----cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1111111101001110 1124578889999999999987 9999999876
No 134
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=6.8e-35 Score=318.26 Aligned_cols=272 Identities=23% Similarity=0.349 Sum_probs=205.1
Q ss_pred CCCCCCccccCCcEeEEEEEE-----CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecC--Ccee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-----QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKP--DFKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 740 (983)
-|.+.+.||+|+||.||+++. .++..||+|.++..........+.+|++++++++|||++++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 356788999999999999984 247789999987655555567899999999999999999999998765 5678
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||+++.
T Consensus 85 lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 999999999999998643 235899999999999999999999996 99999999999999999999999999986
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
........ .......|+..|+|||+..+..++.++||||||+++|||++++.|+..... .. ...
T Consensus 159 ~~~~~~~~----------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~---~~---~~~ 222 (284)
T cd05079 159 IETDKEYY----------TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMT---LF---LKM 222 (284)
T ss_pred cccCccce----------eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccc---hh---hhh
Confidence 64322210 111224577789999999888899999999999999999998877532111 00 000
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
..+.................... ..+..++.++.+++.+|++.+|++||+++++++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 223 IGPTHGQMTVTRLVRVLEEGKRL----PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cccccccccHHHHHHHHHcCccC----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00000000011111111100000 01123567899999999999999999999999999875
No 135
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=7e-35 Score=319.78 Aligned_cols=262 Identities=27% Similarity=0.402 Sum_probs=205.8
Q ss_pred hCCCCCCCccccCCcEeEEEEEECC------CcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCc
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQD------NTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDF 738 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 738 (983)
.++|...+.||+|+||.||+|.... ...+|+|.+......+...++.+|+++++++ +|+||+++++++...+.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 3467788999999999999998642 3579999987654444456789999999999 89999999999999999
Q ss_pred eeEEEecccCccccccccccc------------CcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC
Q 042568 739 KALVLPLMSNGSLENHLYPSH------------GLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE 806 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~ 806 (983)
.+++|||+++|+|.+++.... .....+++..++.++.|++.||+|||+.+ |+||||||+||++++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEcC
Confidence 999999999999999886421 12456899999999999999999999985 999999999999999
Q ss_pred CCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 042568 807 DLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTD 885 (983)
Q Consensus 807 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~ 885 (983)
++.+||+|||.++.+...... .......++..|+|||+..+..++.++|||||||++||+++ |..||.
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 236 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYY-----------RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 236 (293)
T ss_pred CCeEEeCccccccccccccce-----------eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence 999999999999876532211 01111235678999999988889999999999999999998 888875
Q ss_pred cccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 886 VLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 886 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
... ..+ ..+ .+........ ...+..++.+++.+|++.+|++|||++|++++|+++
T Consensus 237 ~~~-----~~~------------~~~-~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 237 GIP-----VEE------------LFK-LLKEGYRMEK-------PQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred CCC-----HHH------------HHH-HHHcCCcCCC-------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 311 111 111 1111110000 112456789999999999999999999999999887
Q ss_pred H
Q 042568 966 K 966 (983)
Q Consensus 966 ~ 966 (983)
.
T Consensus 292 ~ 292 (293)
T cd05053 292 L 292 (293)
T ss_pred h
Confidence 4
No 136
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.5e-34 Score=314.80 Aligned_cols=260 Identities=24% Similarity=0.407 Sum_probs=204.2
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCc----EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCcee
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNT----RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKA 740 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 740 (983)
..+|...++||+|+||+||+|.+. +++ .||+|++...........+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 356788899999999999999853 444 48999987655555567889999999999999999999999754 568
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
+++||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 85 l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceee
Confidence 999999999999988643 345899999999999999999999996 99999999999999999999999999987
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHH
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~ 899 (983)
+....... ......++..|+|||...+..++.++||||||+++|||++ |..||+... ...+..++.
T Consensus 159 ~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~ 225 (279)
T cd05109 159 LDIDETEY-----------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP--AREIPDLLE 225 (279)
T ss_pred ccccccee-----------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHH
Confidence 65322110 0111235678999999998899999999999999999998 889986321 111111111
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
.......+ ..++.++.+++.+||+.||++||++.|+++.++++...
T Consensus 226 ----------------~~~~~~~~-------~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 226 ----------------KGERLPQP-------PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred ----------------CCCcCCCC-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 11110001 12456788999999999999999999999999887544
No 137
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.2e-34 Score=309.93 Aligned_cols=248 Identities=29% Similarity=0.455 Sum_probs=198.8
Q ss_pred CccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcccc
Q 042568 673 SLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSLE 752 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 752 (983)
++||+|+||.||+|...+++.||+|.++.....+....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46999999999999988889999999876555545567899999999999999999999999999999999999999999
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccC
Q 042568 753 NHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCAN 832 (983)
Q Consensus 753 ~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 832 (983)
+++... ...+++..+..++.|+++||.|+|+.+ ++||||||+||+++.++.++++|||++........
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------ 148 (250)
T cd05085 81 SFLRKK---KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY------ 148 (250)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc------
Confidence 988643 235889999999999999999999986 99999999999999999999999999875432111
Q ss_pred CCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 833 DSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
.......++..|+|||+..+..++.++||||||+++|++++ |..||..... .. ..
T Consensus 149 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~-----~~------------~~- 204 (250)
T cd05085 149 ------SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN-----QQ------------AR- 204 (250)
T ss_pred ------ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH-----HH------------HH-
Confidence 01111234678999999998889999999999999999998 9999853211 00 01
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
..+........ ...++..+.+++.+|++.+|++||++.|++++|.
T Consensus 205 ~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 205 EQVEKGYRMSC-------PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHcCCCCCC-------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11111111000 1124578899999999999999999999999875
No 138
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3e-35 Score=325.43 Aligned_cols=242 Identities=26% Similarity=0.386 Sum_probs=189.8
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
++||+|+||.||+|... +++.||||+++... .....+.+..|.+++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 57889999997543 122345566677777654 899999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--- 150 (316)
T cd05592 81 GDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--- 150 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC---
Confidence 999988864 345899999999999999999999986 9999999999999999999999999997543211
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~-----~~~------------ 203 (316)
T cd05592 151 ----------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED-----EDE------------ 203 (316)
T ss_pred ----------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC-----HHH------------
Confidence 11223569999999999999999999999999999999999999986321 111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHH-HHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSML-DVAH 960 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~ 960 (983)
...... ...+ ..+ .....++.+++.+|++.+|++||++. ++++
T Consensus 204 ~~~~i~-~~~~-~~~-------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 204 LFDSIL-NDRP-HFP-------RWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred HHHHHH-cCCC-CCC-------CCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111111 1110 111 11345678999999999999999975 5544
No 139
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.6e-35 Score=324.69 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=195.6
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
++||+|+||.||+|... +++.||||+++... ..+....+.+|..+++++ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999965 67889999997543 223456688999999998 799999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--- 150 (329)
T cd05588 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--- 150 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCC---
Confidence 999888754 346899999999999999999999996 9999999999999999999999999987422111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||+......... .....
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~---------~~~~~ 211 (329)
T cd05588 151 ----------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD---------QNTED 211 (329)
T ss_pred ----------CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccc---------ccchH
Confidence 11123579999999999999999999999999999999999999996432111000 00001
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC------HHHHHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS------MLDVAHE 961 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~evl~~ 961 (983)
.....+.... ...| .....++.+++.+|++.||++||+ ++|++++
T Consensus 212 ~~~~~~~~~~-~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 212 YLFQVILEKQ-IRIP-------RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHHHHcCC-CCCC-------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 1111111111 1111 123467889999999999999997 6788764
No 140
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.9e-35 Score=326.71 Aligned_cols=243 Identities=25% Similarity=0.322 Sum_probs=194.0
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
++||+|+||.||+|+.. +++.||||+++... ..+....+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 57889999986542 223456678899998876 799999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|..++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--- 150 (321)
T cd05591 81 GDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--- 150 (321)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC---
Confidence 999888864 345889999999999999999999996 9999999999999999999999999987542211
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~-----~~~------------ 203 (321)
T cd05591 151 ----------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN-----EDD------------ 203 (321)
T ss_pred ----------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC-----HHH------------
Confidence 11123469999999999999899999999999999999999999986321 111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-------CHHHHHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-------SMLDVAHE 961 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------s~~evl~~ 961 (983)
..+....... ..+. ....++.+++.+|++.||++|| ++++++++
T Consensus 204 ~~~~i~~~~~--~~p~-------~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 204 LFESILHDDV--LYPV-------WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHcCCC--CCCC-------CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1111111100 0111 1346788999999999999999 88888865
No 141
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.4e-34 Score=313.80 Aligned_cols=258 Identities=30% Similarity=0.450 Sum_probs=197.2
Q ss_pred CCCCCccccCCcEeEEEEEECCC-c--EEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecC------Cc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQDN-T--RIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKP------DF 738 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~~~-~--~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 738 (983)
|.+.++||+|+||.||+|.+.+. . .||+|.++... .....+.+.+|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 34678899999999999997543 3 58999886543 223457889999999999999999999987432 24
Q ss_pred eeEEEecccCcccccccccccC--cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHG--LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
.++++||+++|+|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 6899999999999888743221 1345899999999999999999999985 9999999999999999999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLH 895 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~ 895 (983)
+++.+...... .......+++.|+|||+..+..++.++||||||+++|||++ |+.||.... ..
T Consensus 158 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~--- 221 (272)
T cd05075 158 LSKKIYNGDYY-----------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--NS--- 221 (272)
T ss_pred cccccCcccce-----------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--HH---
Confidence 99876432210 11122346778999999999999999999999999999999 788875321 11
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
+ ..+. +........ ...++..+.+++.+||+.+|++|||+.+++++|+++
T Consensus 222 ~------------~~~~-~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 222 E------------IYDY-LRQGNRLKQ-------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred H------------HHHH-HHcCCCCCC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 1111 111000000 012456789999999999999999999999999875
No 142
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.6e-35 Score=324.52 Aligned_cols=252 Identities=21% Similarity=0.320 Sum_probs=194.7
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.||+|+||.||+|... +++.||+|+++... .......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 57889999997643 223455678899988877 899999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|..++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--- 150 (329)
T cd05618 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--- 150 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC---
Confidence 999887754 346899999999999999999999996 9999999999999999999999999987532111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||+......... .....
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~---------~~~~~ 211 (329)
T cd05618 151 ----------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD---------QNTED 211 (329)
T ss_pred ----------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcc---------cccHH
Confidence 11123579999999999999999999999999999999999999996432111100 00011
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC------HHHHHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS------MLDVAHE 961 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~evl~~ 961 (983)
.+...+... ....| .....++.+++.+|++.||++||+ +.+++++
T Consensus 212 ~~~~~i~~~-~~~~p-------~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 212 YLFQVILEK-QIRIP-------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHHHHhcC-CCCCC-------CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 111111111 11111 124467889999999999999998 4677665
No 143
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.3e-35 Score=320.48 Aligned_cols=264 Identities=24% Similarity=0.351 Sum_probs=201.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-----------------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-----------------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRI 729 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-----------------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 729 (983)
++|++.+.||+|+||.||++... +...||+|++..........++.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888999999999999998632 2345899998765444456789999999999999999999
Q ss_pred eeEEecCCceeEEEecccCcccccccccccCc-------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCe
Q 042568 730 ITICSKPDFKALVLPLMSNGSLENHLYPSHGL-------SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNI 802 (983)
Q Consensus 730 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~Ni 802 (983)
++++...+..++||||+++++|.+++...... ...+++..+..++.|++.|++|||+.+ ++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 99999999999999999999999988654321 234788899999999999999999996 99999999999
Q ss_pred EeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh--C
Q 042568 803 LLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT--G 880 (983)
Q Consensus 803 Ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt--g 880 (983)
+++.++.++|+|||+++.+...... ...+...++..|+|||...+..++.++|||||||++|||++ |
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~ 230 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYY-----------RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCK 230 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcce-----------eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCC
Confidence 9999999999999999865322110 11122345678999999888889999999999999999998 6
Q ss_pred CCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhc-CCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 042568 881 RRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKY-APQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVA 959 (983)
Q Consensus 881 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 959 (983)
..||.... ..+.+.. ........ .....+. ...++..+.+++.+|++.||++||++.||+
T Consensus 231 ~~p~~~~~-----~~~~~~~---------~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~ 291 (296)
T cd05095 231 EQPYSQLS-----DEQVIEN---------TGEFFRDQGRQVYLPK-----PALCPDSLYKLMLSCWRRNAKERPSFQEIH 291 (296)
T ss_pred CCCccccC-----hHHHHHH---------HHHHHhhccccccCCC-----CCCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 67875321 1111110 00000000 0000000 112456789999999999999999999999
Q ss_pred HHHH
Q 042568 960 HEMG 963 (983)
Q Consensus 960 ~~L~ 963 (983)
+.|+
T Consensus 292 ~~l~ 295 (296)
T cd05095 292 ATLL 295 (296)
T ss_pred HHHh
Confidence 9886
No 144
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.2e-35 Score=314.47 Aligned_cols=255 Identities=32% Similarity=0.500 Sum_probs=206.7
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
.+|...++||+|+||.||+|...+++.+|+|.+...... ....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLL-KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchh-hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 457778999999999999999888899999998655432 3567899999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.... ...+++..++.++.|+++|++|||+.+ |+||||||+||++++++.+||+|||.+........
T Consensus 85 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 85 EKGSLLAFLRSPE--GQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred ccCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 9999999997543 346899999999999999999999986 99999999999999999999999999976542211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. .....++..|+|||...+..++.++||||||+++|+|++ |+.||.... .
T Consensus 160 ~-------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--~-------------- 210 (261)
T cd05148 160 L-------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--N-------------- 210 (261)
T ss_pred c-------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--H--------------
Confidence 0 012246778999999988889999999999999999998 899985321 0
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.+.++....... ... ...++..+.+++.+|++.+|++|||++++.+.|+.+
T Consensus 211 -~~~~~~~~~~~~-~~~-------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 211 -HEVYDQITAGYR-MPC-------PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -HHHHHHHHhCCc-CCC-------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 111111111111 001 123456789999999999999999999999999753
No 145
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.2e-35 Score=331.46 Aligned_cols=254 Identities=22% Similarity=0.231 Sum_probs=200.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|...+.||+|+||.||+|... +++.||+|+++.... .+..+.+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999965 688999999975432 234567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999998753 246899999999999999999999996 99999999999999999999999999986643
Q ss_pred CcccccccCCCCccccccCccccccccccccccC------CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHH
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM------GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEW 897 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~ 897 (983)
.... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.... . ...
T Consensus 155 ~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~----~-~~~ 217 (330)
T cd05601 155 NKMV------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT----S-AKT 217 (330)
T ss_pred CCce------------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC----H-HHH
Confidence 2211 112246899999999986 4567899999999999999999999986321 1 111
Q ss_pred HHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 898 VKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.............+. ......++.+++..|++ +|++||++++++++
T Consensus 218 ------------~~~i~~~~~~~~~~~-----~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 218 ------------YNNIMNFQRFLKFPE-----DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ------------HHHHHcCCCccCCCC-----CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 111111000000010 01245678889999998 99999999999865
No 146
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.8e-35 Score=319.41 Aligned_cols=261 Identities=27% Similarity=0.406 Sum_probs=203.5
Q ss_pred CCCCCCCccccCCcEeEEEEEECC-Cc--EEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD-NT--RIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 742 (983)
++|++.++||+|+||.||+|...+ +. .+|+|.++........+.+.+|+++++++ +||||+++++++......++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468889999999999999998653 33 47888886544444457789999999999 799999999999999999999
Q ss_pred EecccCcccccccccccC------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCE
Q 042568 743 LPLMSNGSLENHLYPSHG------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTA 810 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~ 810 (983)
+||+++++|.+++..... ....+++..++.++.|++.|++|||+.+ |+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 999999999999865321 1235889999999999999999999986 9999999999999999999
Q ss_pred EEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccC
Q 042568 811 LVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFH 889 (983)
Q Consensus 811 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~ 889 (983)
||+|||++....... .......+..|+|||+..+..++.++|||||||++|||++ |+.||....
T Consensus 159 kl~dfg~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~- 223 (297)
T cd05089 159 KIADFGLSRGEEVYV--------------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT- 223 (297)
T ss_pred EECCcCCCcccccee--------------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-
Confidence 999999986322110 0011123457999999998889999999999999999997 999985321
Q ss_pred CCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhc
Q 042568 890 DGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYL 969 (983)
Q Consensus 890 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 969 (983)
..+ ..+....... ...+ ..++.++.+++.+|++.+|.+||++.++++.|+.+.+..
T Consensus 224 ----~~~------------~~~~~~~~~~-~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 224 ----CAE------------LYEKLPQGYR-MEKP-------RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred ----HHH------------HHHHHhcCCC-CCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111 1111111100 0011 124567889999999999999999999999999887654
No 147
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.8e-35 Score=327.24 Aligned_cols=248 Identities=23% Similarity=0.304 Sum_probs=195.4
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCC-CccceeeEEecCCceeEEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHR-NLIRIITICSKPDFKALVL 743 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 743 (983)
+|+..+.||+|+||.||+|+.. +++.||||++.... .....+.+..|.++++.++|+ +|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999965 56789999986542 223456788899999999765 5888999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999988864 345889999999999999999999996 99999999999999999999999999874321
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+
T Consensus 154 ~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~------- 208 (324)
T cd05587 154 GG-------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-----EDE------- 208 (324)
T ss_pred CC-------------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHH-------
Confidence 11 11123469999999999999999999999999999999999999986321 011
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH-----HHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM-----LDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~~ 961 (983)
.... +.... ...+ .....++.+++.+|+..||++|++. +++.++
T Consensus 209 -----~~~~-i~~~~-~~~~-------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 209 -----LFQS-IMEHN-VSYP-------KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred -----HHHH-HHcCC-CCCC-------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1111 11110 0011 1234678899999999999999986 666654
No 148
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-34 Score=320.13 Aligned_cols=272 Identities=21% Similarity=0.281 Sum_probs=206.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|.+.+.||+|+||.||+|... ++..||+|.++.....+...++.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888999999999999999965 57889999987654444567789999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++... ..+++..+..++.|+++||+|||+.. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 81 MDGGSLDQVLKKA----GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 9999999998643 45889999999999999999999742 49999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.....|+..|+|||...+..++.++||||||+++|+|++|+.||.... ......+........
T Consensus 155 ---------------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~ 217 (308)
T cd06615 155 ---------------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEG 217 (308)
T ss_pred ---------------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccc
Confidence 122468899999999988889999999999999999999999985321 111222111110000
Q ss_pred C-----------------cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 906 L-----------------DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 906 ~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
. .....+..........+... ......++.+++.+|+..+|++||+++|++++-.-
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP---SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred cccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCc---CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 0 00001111111111111100 11245678999999999999999999999988654
No 149
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.3e-35 Score=332.61 Aligned_cols=256 Identities=19% Similarity=0.223 Sum_probs=198.6
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
..++|+..+.||+|+||.||+|+.. +++.||+|++.... .......+.+|+++++.++||||+++++++...+..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 4567999999999999999999965 57889999986432 22234568899999999999999999999999999999
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+|+..
T Consensus 121 v~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 121 VMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceec
Confidence 9999999999998863 34788999999999999999999996 999999999999999999999999999865
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCC----CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHH
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK----RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEW 897 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~ 897 (983)
..... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ...
T Consensus 193 ~~~~~------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~-----~~~- 254 (370)
T cd05621 193 DETGM------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-----LVG- 254 (370)
T ss_pred ccCCc------------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC-----HHH-
Confidence 42211 111235799999999998764 37889999999999999999999986321 111
Q ss_pred HHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCC--CCCHHHHHHHH
Q 042568 898 VKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPST--RPSMLDVAHEM 962 (983)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~L 962 (983)
..............+. .......+.+++.+|+..+|.+ ||+++|++++-
T Consensus 255 -----------~~~~i~~~~~~~~~p~-----~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp 305 (370)
T cd05621 255 -----------TYSKIMDHKNSLNFPE-----DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP 305 (370)
T ss_pred -----------HHHHHHhCCcccCCCC-----cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence 1111111111001110 1124566788888899755543 89999999873
No 150
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=7.7e-35 Score=316.57 Aligned_cols=259 Identities=25% Similarity=0.391 Sum_probs=201.6
Q ss_pred hCCCCCCCccccCCcEeEEEEEECC------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCce
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQD------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFK 739 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 739 (983)
+++|...+.||+|+||.||+|.+.. +..||+|.+...........|.+|+.++++++|+||+++++++...+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4568889999999999999999753 5678999886554444456799999999999999999999999988899
Q ss_pred eEEEecccCcccccccccccC---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC---CEEEc
Q 042568 740 ALVLPLMSNGSLENHLYPSHG---LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL---TALVA 813 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~---~~kl~ 813 (983)
++||||+++++|.+++..... ....+++..+.+++.||++|++|||+.+ ++||||||+||+++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence 999999999999998865431 1235899999999999999999999996 99999999999998654 69999
Q ss_pred cccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCC
Q 042568 814 DFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGS 892 (983)
Q Consensus 814 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~ 892 (983)
|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .
T Consensus 162 dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--~ 228 (277)
T cd05036 162 DFGMARDIYRASYY-----------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--Q 228 (277)
T ss_pred cCccccccCCccce-----------ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--H
Confidence 99999866321110 01111234578999999999899999999999999999997 9999863211 0
Q ss_pred chHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 893 SLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 893 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.+... +........+ ..++..+.+++.+|++.+|++||++.+|+++|.
T Consensus 229 ~~~~~----------------~~~~~~~~~~-------~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 229 EVMEF----------------VTGGGRLDPP-------KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHH----------------HHcCCcCCCC-------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11111 1110000011 124567899999999999999999999999885
No 151
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6e-35 Score=317.56 Aligned_cols=258 Identities=28% Similarity=0.462 Sum_probs=203.5
Q ss_pred CCCCCCCccccCCcEeEEEEEECC------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCcee
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKA 740 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 740 (983)
++|.+.+.||+|+||.||+|.... +..||+|.+...........+.+|+++++.++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 467788999999999999998642 36799999865544444567889999999999999999999999999999
Q ss_pred EEEecccCcccccccccccCc------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcc
Q 042568 741 LVLPLMSNGSLENHLYPSHGL------SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVAD 814 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~D 814 (983)
+||||+++|+|.+++...... ...+++..++.++.|++.||.|||+.+ |+||||||+||++++++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEECC
Confidence 999999999999988653321 234789999999999999999999986 99999999999999999999999
Q ss_pred ccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCc
Q 042568 815 FGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSS 893 (983)
Q Consensus 815 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~ 893 (983)
||+++........ .......+|..|+|||...+..++.++||||||+++||+++ |+.||.... ..
T Consensus 163 fg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~- 228 (277)
T cd05032 163 FGMTRDIYETDYY-----------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS--NE- 228 (277)
T ss_pred cccchhhccCccc-----------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC--HH-
Confidence 9999865432210 11122356789999999988889999999999999999998 888875311 11
Q ss_pred hHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 894 LHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 894 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+ ..+ .+........+ ..++.++.+++.+|++.+|++|||+.|+++.|+
T Consensus 229 --~------------~~~-~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 229 --E------------VLK-FVIDGGHLDLP-------ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred --H------------HHH-HHhcCCCCCCC-------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1 111 11111111111 113567899999999999999999999999875
No 152
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5.3e-35 Score=319.00 Aligned_cols=253 Identities=25% Similarity=0.322 Sum_probs=200.4
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
+|+..++||+|+||.||++... +++.||||.+..... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4777899999999999999964 688999999864322 1224567889999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++|+|.+++.... ...+++..+..++.|+++|+.|||+.+ |+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNMG--NPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 999999998876432 346899999999999999999999996 999999999999999999999999998765321
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
.. .....||..|+|||.+.+..++.++||||+||++|||++|+.||..... ...
T Consensus 156 ~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~--~~~---------- 209 (285)
T cd05605 156 ET--------------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE--KVK---------- 209 (285)
T ss_pred Cc--------------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch--hhH----------
Confidence 11 1123689999999999988899999999999999999999999864211 000
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
.+.+...+...... . ....+..+.+++.+|++.||++|| ++++++++
T Consensus 210 --~~~~~~~~~~~~~~-~-------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 210 --REEVERRVKEDQEE-Y-------SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred --HHHHHHHhhhcccc-c-------CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00111111111100 0 122456788999999999999999 88899775
No 153
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-34 Score=313.33 Aligned_cols=258 Identities=28% Similarity=0.460 Sum_probs=203.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCc---EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNT---RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~---~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
++|+..+.||+|+||.||+|... +++ .+|+|.++........+.+..|++++++++|||++++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46777899999999999999965 333 69999986654444567899999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++++|.+++... ...+++..+..++.|++.|++|||+.+ ++||||||+||++++++.++++|||++....
T Consensus 85 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 85 TEYMENGALDKYLRDH---DGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999988643 245899999999999999999999986 9999999999999999999999999987664
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~ 901 (983)
...... ........+..|+|||++.+..++.++||||||+++|||++ |+.||..... .++..
T Consensus 159 ~~~~~~----------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~~-- 221 (268)
T cd05063 159 DDPEGT----------YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVMK-- 221 (268)
T ss_pred cccccc----------eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHH--
Confidence 322110 00011123567999999998889999999999999999998 9999853211 11111
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.+.... ..+. ..+++.++.+++.+|++.+|++||++.+|++.|+++
T Consensus 222 -----------~i~~~~--~~~~-----~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 222 -----------AINDGF--RLPA-----PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -----------HHhcCC--CCCC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111110 0110 123456789999999999999999999999999876
No 154
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.1e-34 Score=317.07 Aligned_cols=261 Identities=25% Similarity=0.408 Sum_probs=203.2
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCce
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFK 739 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 739 (983)
+++|++.++||+|+||.||+|..+ .+..||+|.++..........+.+|+.+++.++||||+++++++...+..
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 567889999999999999999753 24579999886554433455788999999999999999999999999999
Q ss_pred eEEEecccCcccccccccccC------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEc
Q 042568 740 ALVLPLMSNGSLENHLYPSHG------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVA 813 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~ 813 (983)
++||||+++|+|.+++..... .....++..+..++.|++.||+|||+.+ |+||||||+||++++++.++++
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEEC
Confidence 999999999999999864321 1234677889999999999999999986 9999999999999999999999
Q ss_pred cccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCC
Q 042568 814 DFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGS 892 (983)
Q Consensus 814 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~ 892 (983)
|||+++........ .......++..|+|||+..+..++.++|||||||++|||++ |+.||.....
T Consensus 162 Dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--- 227 (288)
T cd05061 162 DFGMTRDIYETDYY-----------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--- 227 (288)
T ss_pred cCCccccccccccc-----------cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 99998865432111 11112245778999999998889999999999999999999 7888753211
Q ss_pred chHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 893 SLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 893 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.++ .+........ ..+ ..++..+.+++.+|++.+|++|||+.|+++.+++.
T Consensus 228 --~~~------------~~~~~~~~~~-~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 228 --EQV------------LKFVMDGGYL-DQP-------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred --HHH------------HHHHHcCCCC-CCC-------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 111 1111110000 000 12356899999999999999999999999988865
No 155
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.5e-34 Score=312.63 Aligned_cols=258 Identities=27% Similarity=0.421 Sum_probs=204.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-C---CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-D---NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~---~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
++|.+.+.||+|+||.||+|.+. + +..+|+|.++........+.+.+|++++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46778899999999999999863 2 3369999987654444567899999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++++|.+++... ...+++.++..++.|++.|++|||+.+ ++||||||+||+++.++.++++|||++..+.
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999998653 235899999999999999999999986 9999999999999999999999999998765
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~ 901 (983)
...... .......++..|+|||++.+..++.++||||||+++||+++ |+.||..... ...
T Consensus 158 ~~~~~~----------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--~~~------- 218 (267)
T cd05066 158 DDPEAA----------YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--QDV------- 218 (267)
T ss_pred ccccee----------eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--HHH-------
Confidence 322111 01111234568999999998889999999999999999887 9999853211 011
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.+. +..... .+. ...++..+.+++.+|++.+|++||++.++++.|.++
T Consensus 219 --------~~~-~~~~~~--~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 219 --------IKA-IEEGYR--LPA-----PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --------HHH-HhCCCc--CCC-----CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111 111000 010 112456788999999999999999999999999875
No 156
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.1e-35 Score=333.73 Aligned_cols=264 Identities=23% Similarity=0.261 Sum_probs=196.7
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
+|...++||+|+||.||+|+.. +++.||+|.+..... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999964 678899999865421 2245678899999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 82 ~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIRM----GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 99999999988642 35788999999999999999999996 999999999999999999999999998643211
Q ss_pred cccccc------cCCCC----------------------------ccccccCccccccccccccccCCCCCCccchhHHH
Q 042568 825 DESVNC------ANDSM----------------------------SFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSF 870 (983)
Q Consensus 825 ~~~~~~------~~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~Sl 870 (983)
...... ..+.. .........+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 100000 00000 00001123579999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCC
Q 042568 871 GVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPS 950 (983)
Q Consensus 871 G~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 950 (983)
||++|||++|+.||..... . +.....+........+. ......++.+++.+|+ .+|+
T Consensus 235 Gvil~elltG~~Pf~~~~~----~-------------~~~~~i~~~~~~~~~p~-----~~~~s~~~~~li~~l~-~~p~ 291 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTP----L-------------ETQMKVINWQTSLHIPP-----QAKLSPEASDLIIKLC-RGPE 291 (382)
T ss_pred hHHHHHHHhCCCCCCCCCH----H-------------HHHHHHHccCCCcCCCC-----cccCCHHHHHHHHHHc-cCHh
Confidence 9999999999999863210 0 00111111111111110 1123456777777765 4999
Q ss_pred CCCC---HHHHHHH
Q 042568 951 TRPS---MLDVAHE 961 (983)
Q Consensus 951 ~RPs---~~evl~~ 961 (983)
+|++ ++|+++|
T Consensus 292 ~R~~~~~~~ei~~h 305 (382)
T cd05625 292 DRLGKNGADEIKAH 305 (382)
T ss_pred HcCCCCCHHHHhcC
Confidence 9987 8888765
No 157
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.8e-35 Score=323.86 Aligned_cols=242 Identities=25% Similarity=0.360 Sum_probs=190.7
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
++||+|+||.||+|... +++.||+|.++.... ......+..|.+++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999965 688999999975431 22345677788888765 899999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 81 g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 150 (316)
T cd05620 81 GDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--- 150 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC---
Confidence 999988864 345889999999999999999999996 9999999999999999999999999987432111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~-----~~~------------ 203 (316)
T cd05620 151 ----------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-----EDE------------ 203 (316)
T ss_pred ----------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHH------------
Confidence 11123569999999999999999999999999999999999999986321 111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHH-HHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSML-DVAH 960 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~ 960 (983)
..+. +.... ...+. ....++.+++.+|++.||++||++. ++.+
T Consensus 204 ~~~~-~~~~~-~~~~~-------~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 204 LFES-IRVDT-PHYPR-------WITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred HHHH-HHhCC-CCCCC-------CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1111 11111 01111 1346788999999999999999985 5653
No 158
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.1e-34 Score=316.56 Aligned_cols=272 Identities=25% Similarity=0.338 Sum_probs=201.8
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-----CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecC--Cce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-----DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKP--DFK 739 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 739 (983)
.+|.+.+.||+|+||.||+|..+ ++..||+|.+..... ...+.+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 46788899999999999999743 577899999865432 3456789999999999999999999987543 467
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++|+||+++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred EEEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccc
Confidence 8999999999999998643 235899999999999999999999996 9999999999999999999999999998
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
......... .......++..|+|||+..+..++.++||||||+++|||++|..|+.... ......+.
T Consensus 157 ~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~---~~~~~~~~ 223 (284)
T cd05081 157 VLPQDKEYY----------KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP---AEFMRMMG 223 (284)
T ss_pred cccCCCcce----------eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc---hhhhhhcc
Confidence 765322110 00111234556999999998889999999999999999999987753211 00000000
Q ss_pred hhCC-CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 900 RHYP-HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 900 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.... ..........+..... .+ ....++.++.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 224 NDKQGQMIVYHLIELLKNNGR--LP-----APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cccccccchHHHHHHHhcCCc--CC-----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000 0010111111111110 01 0123456799999999999999999999999999876
No 159
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-34 Score=319.71 Aligned_cols=264 Identities=26% Similarity=0.412 Sum_probs=205.5
Q ss_pred CCCCCCCccccCCcEeEEEEEEC--------CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCC
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ--------DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPD 737 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 737 (983)
++|.+.+.||+|+||.||+|... ....||+|.++..........+.+|+++++++ +||||+++++++....
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46778899999999999999742 24568999987554444567789999999999 6999999999999888
Q ss_pred ceeEEEecccCcccccccccccC------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeC
Q 042568 738 FKALVLPLMSNGSLENHLYPSHG------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLD 805 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~ 805 (983)
..++||||+++|+|.+++..... ....+++..+.+++.|++.||+|||+++ ++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence 99999999999999999865321 1245899999999999999999999986 99999999999999
Q ss_pred CCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 042568 806 EDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPT 884 (983)
Q Consensus 806 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~ 884 (983)
.++.+||+|||.++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~ 237 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYY-----------KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY 237 (314)
T ss_pred CCCcEEEccccccccccccccc-----------cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCC
Confidence 9999999999999866432111 00111234567999999998889999999999999999999 88887
Q ss_pred CcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 885 DVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 885 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
.... ..+ ..+ .+........+ ..++.++.+++.+|+..+|++||++.|+++.|++
T Consensus 238 ~~~~-----~~~------------~~~-~~~~~~~~~~~-------~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 292 (314)
T cd05099 238 PGIP-----VEE------------LFK-LLREGHRMDKP-------SNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK 292 (314)
T ss_pred CCCC-----HHH------------HHH-HHHcCCCCCCC-------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 5321 111 111 11111100011 1245678899999999999999999999999998
Q ss_pred hHhhc
Q 042568 965 LKQYL 969 (983)
Q Consensus 965 ~~~~~ 969 (983)
+....
T Consensus 293 ~~~~~ 297 (314)
T cd05099 293 VLAAV 297 (314)
T ss_pred HHHHh
Confidence 86543
No 160
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.6e-34 Score=311.02 Aligned_cols=253 Identities=32% Similarity=0.501 Sum_probs=201.2
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
++|.+.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|++++++++|+|++++++++. ....+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 35778899999999999999988888899999865433 2467999999999999999999999885 45679999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.++|+|||.+..+.....
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 83 SKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 9999999887532 345899999999999999999999986 99999999999999999999999999986543211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......++..|+|||+..+..++.++||||||+++|||++ |+.||.... ..
T Consensus 158 ~------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~------------- 210 (260)
T cd05070 158 T------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--NR------------- 210 (260)
T ss_pred c------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--HH-------------
Confidence 1 0111235678999999988889999999999999999999 888885321 10
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
+..+. +...... + ...+.+..+.+++.+|+..+|++|||+.++.+.|+.
T Consensus 211 --~~~~~-~~~~~~~--~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 211 --EVLEQ-VERGYRM--P-----CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --HHHHH-HHcCCCC--C-----CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11111 1110000 0 012345679999999999999999999999988875
No 161
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.4e-35 Score=319.03 Aligned_cols=269 Identities=23% Similarity=0.345 Sum_probs=208.4
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|+..+.||+|+||+||+|... +++.||+|++......+..+++.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 35667789999999999999965 68889999987655555567899999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.. ...+++..+..++.++++|+.|||+.. +++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 85 MDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred CCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 999999988764 235899999999999999999999743 4999999999999999999999999998654221
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
......|+..|+|||++.+..++.++|||||||++|++++|+.||+.....+.. ...+..
T Consensus 158 --------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~------~~~~~~ 217 (284)
T cd06620 158 --------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG------QDDPMG 217 (284)
T ss_pred --------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh------hhhhhH
Confidence 112246899999999998888999999999999999999999999753321110 000000
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhc
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYL 969 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 969 (983)
+.......+... ....+ ..+.+.++.+++.+|++.||++||+++|++++..-++...
T Consensus 218 ~~~~~~~~~~~~-~~~~~------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 218 ILDLLQQIVQEP-PPRLP------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred HHHHHHHHhhcc-CCCCC------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 111111111111 10000 1225567899999999999999999999999865554433
No 162
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-35 Score=321.35 Aligned_cols=254 Identities=25% Similarity=0.346 Sum_probs=212.5
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKRIR-HRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 741 (983)
...|...+.||+|.||.||+++.+ +|+.+|+|.+++.... .....+.+|+++|+++. |||||.++++|.+....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 356778899999999999999966 5999999999766542 24578999999999998 9999999999999999999
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC----CCEEEccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED----LTALVADFGI 817 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~----~~~kl~Dfgl 817 (983)
|||+++||.|.+.+... .+++..+..++.|++.|+.|||+.| |+|||+||+|+|+... +.+|++|||+
T Consensus 114 vmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 99999999999998754 2899999999999999999999986 9999999999999633 5799999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHH
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEW 897 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~ 897 (983)
|...... ......+||+.|+|||.+....|+..+||||+||++|.|++|..||.......
T Consensus 186 a~~~~~~--------------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~------ 245 (382)
T KOG0032|consen 186 AKFIKPG--------------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE------ 245 (382)
T ss_pred ceEccCC--------------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH------
Confidence 9987651 22344789999999999999999999999999999999999999986421110
Q ss_pred HHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 898 VKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.......... ......|+.....+.+++..|+..||.+|+|+.++++|-+
T Consensus 246 -----------~~~~i~~~~~-----~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 246 -----------IFLAILRGDF-----DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred -----------HHHHHHcCCC-----CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 1111111111 2234457788899999999999999999999999999854
No 163
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.7e-35 Score=323.73 Aligned_cols=243 Identities=25% Similarity=0.317 Sum_probs=194.1
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.||+|+||.||+|... +++.||||+++... .......+.+|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 57889999997542 223456678899999888 799999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 150 (318)
T cd05570 81 GDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--- 150 (318)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC---
Confidence 999888764 235899999999999999999999996 9999999999999999999999999987432111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .....
T Consensus 151 ----------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~---------- 205 (318)
T cd05570 151 ----------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELF---------- 205 (318)
T ss_pred ----------CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHH----------
Confidence 11122468999999999999999999999999999999999999986321 11111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH-----HHHHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM-----LDVAHE 961 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~~ 961 (983)
...... . ...+ .....++.+++.+|++.||++||++ .+++++
T Consensus 206 --~~i~~~-~-~~~~-------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 206 --QSILED-E-VRYP-------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred --HHHHcC-C-CCCC-------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 111100 0 0011 1234678999999999999999999 888765
No 164
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.9e-34 Score=311.50 Aligned_cols=258 Identities=29% Similarity=0.453 Sum_probs=200.0
Q ss_pred CCCCCccccCCcEeEEEEEECC----CcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCc-----
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQD----NTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDF----- 738 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 738 (983)
|...+.||+|+||.||+|.... +..||||.++.... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998642 36799999875432 2235678999999999999999999998865544
Q ss_pred -eeEEEecccCcccccccccccC--cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 739 -KALVLPLMSNGSLENHLYPSHG--LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 739 -~~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
.++++||+++|+|.+++..... ....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 6899999999999988754321 1346899999999999999999999986 999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCch
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSL 894 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l 894 (983)
|+++.+...... .......++..|+|||+..+..++.++||||||+++|||++ |..||..... .
T Consensus 158 g~~~~~~~~~~~-----------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~-- 222 (273)
T cd05035 158 GLSKKIYSGDYY-----------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--H-- 222 (273)
T ss_pred cceeeccccccc-----------cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--H--
Confidence 999866432211 01111235678999999988889999999999999999999 8888753211 0
Q ss_pred HHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 895 HEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
+..+... .......+ ..++.++.+++.+|++.||++||++.|++++|+++
T Consensus 223 -------------~~~~~~~-~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 223 -------------EIYDYLR-HGNRLKQP-------EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -------------HHHHHHH-cCCCCCCC-------cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111111 11111111 12456899999999999999999999999999875
No 165
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3e-35 Score=334.21 Aligned_cols=265 Identities=22% Similarity=0.238 Sum_probs=198.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|++.+.||+|+||.||+|+.. +++.||||++.... .......+.+|++++++++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36888999999999999999954 68889999985432 1223567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|..+..
T Consensus 81 E~~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIRL----GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 999999999998643 35788899999999999999999996 99999999999999999999999999864321
Q ss_pred CcccccccC-------------C-----------------CCccccccCccccccccccccccCCCCCCccchhHHHHHH
Q 042568 824 IDESVNCAN-------------D-----------------SMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVL 873 (983)
Q Consensus 824 ~~~~~~~~~-------------~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~i 873 (983)
......... . ............||+.|+|||++.+..++.++||||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 100000000 0 0000011123579999999999999999999999999999
Q ss_pred HHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC
Q 042568 874 LLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP 953 (983)
Q Consensus 874 l~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 953 (983)
+|||++|+.||..... .+... ...........+ .......++.+++.+|+ .+|++|+
T Consensus 234 lyell~G~~Pf~~~~~-----~~~~~------------~i~~~~~~~~~~-----~~~~~s~~~~~li~~l~-~~p~~R~ 290 (376)
T cd05598 234 LYEMLVGQPPFLADTP-----AETQL------------KVINWETTLHIP-----SQAKLSREASDLILRLC-CGAEDRL 290 (376)
T ss_pred eeehhhCCCCCCCCCH-----HHHHH------------HHhccCccccCC-----CCCCCCHHHHHHHHHHh-cCHhhcC
Confidence 9999999999864211 11110 000000000001 01124456777888876 4999999
Q ss_pred ---CHHHHHHH
Q 042568 954 ---SMLDVAHE 961 (983)
Q Consensus 954 ---s~~evl~~ 961 (983)
++.|++++
T Consensus 291 ~~~t~~ell~h 301 (376)
T cd05598 291 GKNGADEIKAH 301 (376)
T ss_pred CCCCHHHHhCC
Confidence 89999976
No 166
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.7e-35 Score=325.36 Aligned_cols=248 Identities=22% Similarity=0.306 Sum_probs=195.5
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 743 (983)
+|.+.+.||+|+||.||+|+.. +++.||||++..... ......+..|.+++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999965 577899999875432 22345677788888877 5899999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999888864 245889999999999999999999996 99999999999999999999999999875321
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..
T Consensus 154 ~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-----~~------- 208 (323)
T cd05616 154 DG-------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DE------- 208 (323)
T ss_pred CC-------------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH-----HH-------
Confidence 11 112235699999999999999999999999999999999999999863210 11
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH-----HHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM-----LDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~~ 961 (983)
.......... ..+ .....++.+++.+|++.+|++|++. .++.++
T Consensus 209 -----~~~~i~~~~~--~~p-------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 209 -----LFQSIMEHNV--AYP-------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred -----HHHHHHhCCC--CCC-------CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 1111111100 011 1244678899999999999999984 666654
No 167
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.8e-34 Score=317.67 Aligned_cols=262 Identities=27% Similarity=0.393 Sum_probs=203.4
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcE--EEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTR--IAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~--vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 742 (983)
++|++.+.||+|+||.||+|.++ ++.. +|+|.++.........++.+|++++.++ +||||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46778899999999999999964 4543 5777775444444567889999999999 899999999999999999999
Q ss_pred EecccCcccccccccccC------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCE
Q 042568 743 LPLMSNGSLENHLYPSHG------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTA 810 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~ 810 (983)
+||+++++|.+++..... ....+++..++.++.|+++|++|||+.+ |+||||||+||++++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 999999999998864321 1235889999999999999999999986 9999999999999999999
Q ss_pred EEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccC
Q 042568 811 LVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFH 889 (983)
Q Consensus 811 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~ 889 (983)
||+|||+++...... ......++..|+|||++.+..++.++|||||||++|||+| |..||.....
T Consensus 164 kl~dfg~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 229 (303)
T cd05088 164 KIADFGLSRGQEVYV--------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 229 (303)
T ss_pred EeCccccCcccchhh--------------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh
Confidence 999999986322100 0111234678999999988889999999999999999998 9999853211
Q ss_pred CCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhc
Q 042568 890 DGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYL 969 (983)
Q Consensus 890 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 969 (983)
.+. .+. +........+ ...+.++.+++.+|++.+|++||++++++++++++.+..
T Consensus 230 -----~~~------------~~~-~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 230 -----AEL------------YEK-LPQGYRLEKP-------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred -----HHH------------HHH-HhcCCcCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111 111 1000000000 123457889999999999999999999999999886655
Q ss_pred C
Q 042568 970 S 970 (983)
Q Consensus 970 ~ 970 (983)
.
T Consensus 285 ~ 285 (303)
T cd05088 285 K 285 (303)
T ss_pred h
Confidence 4
No 168
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.4e-34 Score=309.06 Aligned_cols=249 Identities=26% Similarity=0.422 Sum_probs=195.1
Q ss_pred ccccCCcEeEEEEEEC---CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCc
Q 042568 674 LIGSGRFGHVYKGVLQ---DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 674 ~iG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
.||+|+||.||+|.++ ++..||+|+++..... ...+.+.+|+.+++.++||||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 5899999999999753 5678999998654332 245678999999999999999999998864 5668999999999
Q ss_pred ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccc
Q 042568 750 SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVN 829 (983)
Q Consensus 750 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~ 829 (983)
+|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++.+.......
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~- 152 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY- 152 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCee-
Confidence 99998864 235889999999999999999999986 9999999999999999999999999998764322110
Q ss_pred ccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 830 CANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......++..|+|||......++.++||||||+++|||++ |+.||..... ......
T Consensus 153 ---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~----------- 210 (257)
T cd05116 153 ---------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQM----------- 210 (257)
T ss_pred ---------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH-----------
Confidence 01111235678999999988888999999999999999998 9999864211 111111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
+........+ ..++.++.+++.+||+.||++||++.+|++.|+..
T Consensus 211 -----i~~~~~~~~~-------~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 211 -----IESGERMECP-------QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred -----HHCCCCCCCC-------CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1111100111 12457789999999999999999999999998753
No 169
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.5e-34 Score=316.27 Aligned_cols=260 Identities=27% Similarity=0.417 Sum_probs=203.9
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCce
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFK 739 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 739 (983)
.++|+..+.||+|+||.||+|... ++..||+|.+..........++.+|++++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 356888999999999999999864 46789999987655444567799999999999999999999999998999
Q ss_pred eEEEecccCcccccccccccC------------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCC
Q 042568 740 ALVLPLMSNGSLENHLYPSHG------------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSN 801 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~------------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~N 801 (983)
++|+||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 999999999999998864321 1235788999999999999999999986 9999999999
Q ss_pred eEeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-C
Q 042568 802 ILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-G 880 (983)
Q Consensus 802 iLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g 880 (983)
|++++++.++|+|||.+..+...... .......++..|+|||.+.+..++.++|||||||++|||++ |
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~ 229 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYY-----------KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 229 (288)
T ss_pred eEecCCCceEECccccceecccCccc-----------cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCC
Confidence 99999999999999998755322110 11111235678999999998899999999999999999998 8
Q ss_pred CCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 881 RRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 881 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
..||.... ..+... .+........+ ...+.++.+++.+|++.+|++|||+.|+++
T Consensus 230 ~~p~~~~~-----~~~~~~-------------~~~~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 230 MQPYYGMA-----HEEVIY-------------YVRDGNVLSCP-------DNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCCCCCCC-----HHHHHH-------------HHhcCCCCCCC-------CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 88875321 111111 11111000001 124567899999999999999999999999
Q ss_pred HHHH
Q 042568 961 EMGR 964 (983)
Q Consensus 961 ~L~~ 964 (983)
.|++
T Consensus 285 ~l~~ 288 (288)
T cd05050 285 ILQR 288 (288)
T ss_pred HhhC
Confidence 8863
No 170
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.9e-35 Score=315.81 Aligned_cols=248 Identities=23% Similarity=0.325 Sum_probs=192.7
Q ss_pred cccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 675 IGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 675 iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
||+|+||.||++... +|+.||+|.+...... .....+..|++++++++||||+++++++......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999964 6899999998643221 1234566799999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~----- 150 (277)
T cd05607 81 KYHIYNVG--ERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT----- 150 (277)
T ss_pred HHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCce-----
Confidence 88876432 345889999999999999999999986 99999999999999999999999999876542211
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
.....||..|+|||++.+..++.++||||+||++|||++|+.||...... ..... +..
T Consensus 151 ---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~------------~~~ 208 (277)
T cd05607 151 ---------ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEE------------LKR 208 (277)
T ss_pred ---------eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHH------------HHH
Confidence 11235899999999999988999999999999999999999998632111 01011 111
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
......... .......++.+++.+|++.||++||++.|+++++
T Consensus 209 ~~~~~~~~~--------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 209 RTLEDEVKF--------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred Hhhcccccc--------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 111110000 0012456789999999999999999997665443
No 171
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.7e-35 Score=322.51 Aligned_cols=242 Identities=28% Similarity=0.395 Sum_probs=190.7
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.||+|+||.||+|... +++.||||+++... .......+..|..+++.. +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 57889999986542 122345667788888764 899999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 150 (316)
T cd05619 81 GDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--- 150 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC---
Confidence 999988864 345889999999999999999999996 9999999999999999999999999987432111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~------------ 203 (316)
T cd05619 151 ----------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-----EEE------------ 203 (316)
T ss_pred ----------CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-----HHH------------
Confidence 11122468999999999999899999999999999999999999986321 111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHH-HHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSML-DVAH 960 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~ 960 (983)
..+. +..... ..+. ....++.+++.+|++.||++||++. ++.+
T Consensus 204 ~~~~-i~~~~~-~~~~-------~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 204 LFQS-IRMDNP-CYPR-------WLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHH-HHhCCC-CCCc-------cCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 1111 111110 1111 1345688999999999999999997 6654
No 172
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.7e-34 Score=309.17 Aligned_cols=253 Identities=29% Similarity=0.479 Sum_probs=200.7
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
++|...+.||+|++|.||+|....+..||+|.+..... ..+.+.+|++++++++|+|++++++++. .+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 45778889999999999999988777899998754322 3467899999999999999999999885 45679999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.... ...+++..+..++.|+++||+|||+.+ ++||||||+||++++++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 83 GKGSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence 9999999987532 345899999999999999999999986 99999999999999999999999999976543211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......++..|+|||+..+..++.++||||||+++|||++ |+.||..... .
T Consensus 158 ~------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~------------- 210 (260)
T cd05069 158 T------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--R------------- 210 (260)
T ss_pred c------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--H-------------
Confidence 0 1111246778999999998889999999999999999999 8889853211 0
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
+..+. +....... ...+.+..+.+++.+|++.+|++||+++++.+.|++
T Consensus 211 --~~~~~-~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 211 --EVLEQ-VERGYRMP-------CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --HHHHH-HHcCCCCC-------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01111 11110000 012345778999999999999999999999999875
No 173
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=6.1e-35 Score=324.44 Aligned_cols=238 Identities=25% Similarity=0.328 Sum_probs=187.4
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHH-HHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQ-ILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.||+|+||+||+|... +++.||+|++..... .....++..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999965 688999999865421 122344555555 46789999999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 150 (323)
T cd05575 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--- 150 (323)
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC---
Confidence 999988864 345889999999999999999999996 9999999999999999999999999987532211
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~~~------------ 203 (323)
T cd05575 151 ----------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DTAE------------ 203 (323)
T ss_pred ----------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC-----CHHH------------
Confidence 1122346999999999999999999999999999999999999998532 1111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSML 956 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 956 (983)
..+....... ..+ .....++.+++.+|++.||++||++.
T Consensus 204 ~~~~i~~~~~--~~~-------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 204 MYDNILNKPL--RLK-------PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHcCCC--CCC-------CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1111111111 011 12356788999999999999999984
No 174
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=309.22 Aligned_cols=250 Identities=26% Similarity=0.365 Sum_probs=208.5
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcc-hhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGE-ITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
+-|...+.||+|.|++|-.|++ -+|++||||++++..-.+ ....+.+|++.|+-++|||||++|.+...+...|+|.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 4567788899999999999984 589999999998765443 46788999999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEe-CCCCCEEEccccccccccC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILL-DEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl-~~~~~~kl~Dfgla~~~~~ 823 (983)
.-++|+|.+++.++ ...+.+..+.+++.||+.|+.|+|+.+ +||||+||+||.+ .+-|-+|++|||.+-.+.+
T Consensus 98 LGD~GDl~DyImKH---e~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKH---EEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred ecCCchHHHHHHhh---hccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 99999999999865 456999999999999999999999996 9999999999976 5678999999999987765
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCC-ccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRAS-THGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.+.. .+.+|+..|-|||.+.|..|+ +++||||+|||+|-+++|+.||...- |...+.
T Consensus 172 G~kL--------------~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN-DSETLT------- 229 (864)
T KOG4717|consen 172 GKKL--------------TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN-DSETLT------- 229 (864)
T ss_pred cchh--------------hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc-chhhhh-------
Confidence 5432 346899999999999998886 78899999999999999999997532 111111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
..+.- .... ......++.+||..|+..||.+|.+.+||+.+-
T Consensus 230 ---------mImDC--KYtv-------PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~ 271 (864)
T KOG4717|consen 230 ---------MIMDC--KYTV-------PSHVSKECRDLIQSMLVRDPKKRASLEEIVSTS 271 (864)
T ss_pred ---------hhhcc--cccC-------chhhhHHHHHHHHHHHhcCchhhccHHHHhccc
Confidence 11111 0111 245778999999999999999999999998643
No 175
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2e-34 Score=310.22 Aligned_cols=253 Identities=27% Similarity=0.442 Sum_probs=202.0
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
++|.+.++||+|+||.||+|...+++.||+|.+..... ...++.+|++++++++|+|++++++++. .+..+++|||+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM--SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC--cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 46778899999999999999988899999999864433 2468899999999999999999999874 45689999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 83 ENGSLVDFLKTPE--GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 9999999886543 346899999999999999999999986 99999999999999999999999999976542111
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......++..|+|||++.+..++.++||||||+++||+++ |+.||..... .+.
T Consensus 158 ~------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~-------- 212 (260)
T cd05067 158 T------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN-----PEV-------- 212 (260)
T ss_pred c------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh-----HHH--------
Confidence 0 1112245678999999998889999999999999999999 9999863210 111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
.+. +........ ....+.++.+++.+|++.+|++||+++++...|+.
T Consensus 213 ----~~~-~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 213 ----IQN-LERGYRMPR-------PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----HHH-HHcCCCCCC-------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 111 111100000 11244679999999999999999999999999875
No 176
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.5e-35 Score=302.97 Aligned_cols=264 Identities=23% Similarity=0.306 Sum_probs=208.2
Q ss_pred CCCCCccccCCcEeEEEEEECC-CcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQD-NTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
|...+.||+|.-|+||++..++ +..+|+|++++..- .+...+...|-+||+.+.||.+..+|+.++.++..++||||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey 158 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY 158 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence 4457889999999999999764 47799999977643 23456778899999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
|+||+|....+++. .+.+++..++-++..++-||+|||-.| ||.||+||+|||+.++|++-|+||.++.......
T Consensus 159 CpGGdL~~LrqkQp--~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 159 CPGGDLHSLRQKQP--GKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred CCCccHHHHHhhCC--CCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 99999999888765 567999999999999999999999997 9999999999999999999999999987653211
Q ss_pred cccc-------------------c------cCCC------------------CccccccCccccccccccccccCCCCCC
Q 042568 826 ESVN-------------------C------ANDS------------------MSFTSTDGLLCGSVGYIAPEYGMGKRAS 862 (983)
Q Consensus 826 ~~~~-------------------~------~~~~------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 862 (983)
+.+. + .... .+.......++||-.|.|||++.|...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 1100 0 0000 0111233457899999999999999999
Q ss_pred ccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHh
Q 042568 863 THGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGL 942 (983)
Q Consensus 863 ~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 942 (983)
.++|.|+|||++|||+.|+.||.+.. ....+...+.+.. ..|. ..+.+..+.+||.
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~-~~~Tl~NIv~~~l------------------~Fp~-----~~~vs~~akDLIr 369 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSN-NKETLRNIVGQPL------------------KFPE-----EPEVSSAAKDLIR 369 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCC-chhhHHHHhcCCC------------------cCCC-----CCcchhHHHHHHH
Confidence 99999999999999999999997532 1222222222210 0110 1245678999999
Q ss_pred hhcCCCCCCCCC----HHHHHHH
Q 042568 943 LCTQYNPSTRPS----MLDVAHE 961 (983)
Q Consensus 943 ~cl~~dP~~RPs----~~evl~~ 961 (983)
+.+..||++|.. +.||.+|
T Consensus 370 ~LLvKdP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 370 KLLVKDPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred HHhccChhhhhccccchHHhhcC
Confidence 999999999998 8888764
No 177
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.2e-35 Score=327.36 Aligned_cols=239 Identities=26% Similarity=0.315 Sum_probs=190.6
Q ss_pred CccccCCcEeEEEEEE----CCCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 673 SLIGSGRFGHVYKGVL----QDNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
+.||+|+||.||+++. .+|+.||+|+++..... ....++.+|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 35788999999754322 234567889999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~- 153 (318)
T cd05582 82 GGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK- 153 (318)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-
Confidence 9999988864 345899999999999999999999996 99999999999999999999999999875432211
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ....
T Consensus 154 ------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~-----~~~~---------- 206 (318)
T cd05582 154 ------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD-----RKET---------- 206 (318)
T ss_pred ------------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC-----HHHH----------
Confidence 1122468999999999998889999999999999999999999986321 1111
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLD 957 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 957 (983)
......... ..+ .....++.+++.+|++.||++||++.+
T Consensus 207 --~~~i~~~~~--~~p-------~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 207 --MTMILKAKL--GMP-------QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred --HHHHHcCCC--CCC-------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 111111100 011 123467889999999999999999443
No 178
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.4e-34 Score=311.34 Aligned_cols=256 Identities=25% Similarity=0.360 Sum_probs=190.8
Q ss_pred CccccCCcEeEEEEEECC---CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCc
Q 042568 673 SLIGSGRFGHVYKGVLQD---NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
+.||+|+||.||+|...+ +..+|+|.+...........+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998643 35689998866554444567899999999999999999999999989999999999999
Q ss_pred ccccccccccCc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 750 SLENHLYPSHGL-SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 750 sL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
+|.+++...... ....++..+..++.|+++|++|||+.+ ++||||||+||+++.++.++++|||.++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~- 156 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY- 156 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCccee-
Confidence 999998754321 235677888899999999999999986 999999999999999999999999998754321110
Q ss_pred cccCCCCccccccCccccccccccccccCCC-------CCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHh
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-------RASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~ 900 (983)
.......|+..|+|||++.+. .++.++||||||+++|||++ |+.||...... ......+.
T Consensus 157 ----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~-~~~~~~~~- 224 (269)
T cd05087 157 ----------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE-QVLTYTVR- 224 (269)
T ss_pred ----------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH-HHHHHHhh-
Confidence 111224578899999987642 35789999999999999996 99998542111 00000000
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
........ +... ......+.+++.+|+ .+|++|||++||++.|+
T Consensus 225 -----------~~~~~~~~---~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 225 -----------EQQLKLPK---PRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred -----------cccCCCCC---CccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00000000 0000 113345778888898 58999999999998764
No 179
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.2e-34 Score=313.37 Aligned_cols=254 Identities=21% Similarity=0.330 Sum_probs=198.7
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|++.+.||+|+||.||+|+. .+++.||+|++..... .....+.+|+.++++++||||+++++++...+..++|+||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 4688899999999999999996 4678899999865432 2346788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.. ...+++..+..++.|+++|+.|||+.+ |+|||+||+||+++.++.++|+|||+++......
T Consensus 88 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 88 CGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 999999998864 345889999999999999999999986 9999999999999999999999999998654211
Q ss_pred ccccccCCCCccccccCccccccccccccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM---GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.......|+..|+|||.+. ...++.++||||+||++|||++|+.||........ ...+...
T Consensus 161 -------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~~-- 224 (267)
T cd06646 161 -------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKS-- 224 (267)
T ss_pred -------------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeecC--
Confidence 1112246889999999874 34578899999999999999999999853211100 0000000
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.......+ .....+.++.+++.+|+..+|++||+++++++++
T Consensus 225 -------------~~~~~~~~-----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 225 -------------NFQPPKLK-----DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -------------CCCCCCCc-----cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00000000 0012346788999999999999999999998864
No 180
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.6e-34 Score=308.63 Aligned_cols=250 Identities=30% Similarity=0.452 Sum_probs=203.1
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
++|...+.||+|+||.||+|... ++.||+|.++.... ..+++.+|+.++++++|+||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 46778899999999999999876 88899999965543 4678999999999999999999999999889999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.... ...+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 83 AKGSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred CCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence 9999999987543 236899999999999999999999996 99999999999999999999999999986532111
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
...++..|+|||++.+..++.++||||||+++||+++ |+.||.... ..+
T Consensus 158 ----------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~--------- 207 (256)
T cd05039 158 ----------------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKD--------- 207 (256)
T ss_pred ----------------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-----HHH---------
Confidence 1234568999999998889999999999999999998 999975321 111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.. ..+........+ ...+.++.+++.+|+..+|++||+++|++++|+.+
T Consensus 208 ---~~-~~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 208 ---VV-PHVEKGYRMEAP-------EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---HH-HHHhcCCCCCCc-------cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 11 111111110001 12457789999999999999999999999998753
No 181
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.8e-34 Score=309.84 Aligned_cols=251 Identities=25% Similarity=0.357 Sum_probs=203.4
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|...+.||+|++|.||+|... +++.||+|.+.... .......+.+|++++++++|||++++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3677889999999999999965 68889999986543 233567889999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.... ...+++..++.++.|+++|+.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99999999987542 356899999999999999999999986 9999999999999999999999999988664321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......|++.|+|||+..+..++.++||||||+++++|++|+.||..... ..
T Consensus 156 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~--------- 208 (256)
T cd08529 156 N-------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GA--------- 208 (256)
T ss_pred c-------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HH---------
Confidence 1 11224688999999999998899999999999999999999999863210 00
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..........+. .+ ......+.+++.+|++.+|++||++.+++++
T Consensus 209 ---~~~~~~~~~~~~-~~-------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 209 ---LILKIIRGVFPP-VS-------QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ---HHHHHHcCCCCC-Cc-------cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 111111111110 00 1345678999999999999999999999875
No 182
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.3e-37 Score=334.41 Aligned_cols=362 Identities=29% Similarity=0.419 Sum_probs=261.2
Q ss_pred eEEEEEcccCCcc-cccccccccCCCCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEec
Q 042568 78 KVVELDLSARSIY-GTISPALANLSSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDL 156 (983)
Q Consensus 78 ~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L 156 (983)
-|..+|+++|.++ +..|..+..+++++.|.|...++. .+|++++.|.+|++|.+++|++. .+-..++.|+.|+.+++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 3788999999998 578999999999999999999998 89999999999999999999998 77888999999999999
Q ss_pred cCcccc-cccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceeccccc
Q 042568 157 GNNKLV-GEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESN 235 (983)
Q Consensus 157 s~N~l~-~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 235 (983)
.+|++. ..||..+| .+..|+.||||+|+++ +.|. .+..-.++-.|+|++|+|..+....|.+++.|-.||||+|
T Consensus 86 R~N~LKnsGiP~diF---~l~dLt~lDLShNqL~-EvP~-~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~N 160 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIF---RLKDLTILDLSHNQLR-EVPT-NLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNN 160 (1255)
T ss_pred hccccccCCCCchhc---ccccceeeecchhhhh-hcch-hhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccc
Confidence 999986 35788888 8899999999999998 6664 3446788999999999999666677889999999999999
Q ss_pred ccccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCccc-ccCCccccccccCeeEEEc
Q 042568 236 MFSGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLG-GMIPSIIGDLSTNLVQIHL 314 (983)
Q Consensus 236 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~~L~~L~L 314 (983)
++. .+|+.+ ..+..|++|.||+|.+.... ...+..+++|+.|++++.+-+ ..+|..+..+ .+|..+||
T Consensus 161 rLe-~LPPQ~-RRL~~LqtL~Ls~NPL~hfQ--------LrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l-~NL~dvDl 229 (1255)
T KOG0444|consen 161 RLE-MLPPQI-RRLSMLQTLKLSNNPLNHFQ--------LRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDL-HNLRDVDL 229 (1255)
T ss_pred hhh-hcCHHH-HHHhhhhhhhcCCChhhHHH--------HhcCccchhhhhhhcccccchhhcCCCchhhh-hhhhhccc
Confidence 997 788875 67889999999999764321 234556777778888776554 2345555555 35666666
Q ss_pred cCccccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccC-
Q 042568 315 DCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSG- 393 (983)
Q Consensus 315 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~- 393 (983)
|+|.+. .+|+.+.++++|+.|+||+|+|+ .+.-......+|+.|+||.|+++ .+|++++.+++|+.|++.+|+++-
T Consensus 230 S~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~Fe 306 (1255)
T KOG0444|consen 230 SENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFE 306 (1255)
T ss_pred cccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccccc
Confidence 666665 55666666666666666666665 33333444555666666666665 555556666666666666665541
Q ss_pred cCcccccCcccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCC
Q 042568 394 SIPDSFANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNH 463 (983)
Q Consensus 394 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~ 463 (983)
-+|..++.+.+|+.+..++|.+. .+|++++.+..|+.|.|++|++. .+|+.+.-++.|+. ||+..|.
T Consensus 307 GiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~v-LDlreNp 373 (1255)
T KOG0444|consen 307 GIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKV-LDLRENP 373 (1255)
T ss_pred CCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcce-eeccCCc
Confidence 24555555555665555555555 55555555555555555555555 45555555555554 5555554
No 183
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-34 Score=329.97 Aligned_cols=271 Identities=20% Similarity=0.317 Sum_probs=199.0
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
..+|.+.+.||+|+||.||+|.+. .++.||||... ...+.+|++++++++|+||+++++++...+..++|||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 457889999999999999999975 57889999632 2446789999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
++. ++|.+++... ...+++..++.|+.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 241 ~~~-~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 241 KYR-SDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred ccC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 995 6887777542 236899999999999999999999996 999999999999999999999999999865432
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCC--CC----chHHHH
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHD--GS----SLHEWV 898 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~--~~----~l~~~~ 898 (983)
... .......||..|+|||++.+..++.++|||||||++|||++|..|+...... .. .+...+
T Consensus 314 ~~~-----------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i 382 (461)
T PHA03211 314 WST-----------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRII 382 (461)
T ss_pred ccc-----------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHH
Confidence 111 1112346999999999999999999999999999999999998765322111 11 122222
Q ss_pred Hhh------CCCCCc-HHHHHHHhhcCCCCCccccccchH---HHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 899 KRH------YPHRLD-PIVEKAIAKYAPQHMPIYYNKVWS---DVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 899 ~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
... ++.... ...............+......|. ....++.+++.+|++.||++|||+.|++++
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 383 RQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 211 111100 011111000000011111111222 234478899999999999999999999986
No 184
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.5e-34 Score=327.88 Aligned_cols=272 Identities=21% Similarity=0.265 Sum_probs=198.5
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCC-----cee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPD-----FKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 740 (983)
+|+..+.||+|+||.||+|.. .+++.||||.+..... ....+++.+|+++++.++||||+++++++..++ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999996 4789999999864322 223567889999999999999999999998776 789
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
+|+||+. ++|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999997 467666643 346899999999999999999999996 99999999999999999999999999986
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
...... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+.
T Consensus 153 ~~~~~~------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~ 218 (372)
T cd07853 153 EEPDES------------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP--IQQLDLIT 218 (372)
T ss_pred cccCcc------------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH--HHHHHHHH
Confidence 542211 111224688999999998874 478999999999999999999999864211 11111111
Q ss_pred hhCCCCCcHHH-------HHHHhhcCCCCCccc--cccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 900 RHYPHRLDPIV-------EKAIAKYAPQHMPIY--YNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 900 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
........... ...+.... ...+.. ......+...++.+++.+|++.||++|||++|++++-
T Consensus 219 ~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 219 DLLGTPSLEAMRSACEGARAHILRGP-HKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HHcCCCCHHHHHHhhHHHHHHHHhCC-CCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 11111100000 01110000 000000 0001122356789999999999999999999999863
No 185
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.3e-34 Score=310.87 Aligned_cols=251 Identities=21% Similarity=0.319 Sum_probs=202.1
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
+|++.+.||+|+||.||++... +++.||+|.++........+.+.+|++++++++|+|++++++++...+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4677899999999999999965 688899999876554445678889999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
+++++.+++.... ...+++..++.++.|+++|+.|||+.+ |+|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 81 DGGDLMQKIKLQR--GKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred CCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 9999988876432 345789999999999999999999986 99999999999999999999999999876543211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
......|+..|+|||+..+..++.++||||||+++|+|++|+.||... ......
T Consensus 156 -------------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----~~~~~~-------- 209 (255)
T cd08219 156 -------------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-----SWKNLI-------- 209 (255)
T ss_pred -------------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-----CHHHHH--------
Confidence 112246889999999999888999999999999999999999998632 111111
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.... .......+ ......+.+++.+||+.||++||++.+++..
T Consensus 210 ----~~~~-~~~~~~~~-------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 210 ----LKVC-QGSYKPLP-------SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ----HHHh-cCCCCCCC-------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1110 10000011 1234568899999999999999999999864
No 186
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.6e-34 Score=307.70 Aligned_cols=251 Identities=26% Similarity=0.419 Sum_probs=197.8
Q ss_pred CccccCCcEeEEEEEECC----CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQD----NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
++||+|+||.||+|+... +..||+|.+.........+++.+|+++++++.|||++++++++.. +..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 469999999999998532 267999998766544456789999999999999999999998764 467999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++... ..+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKR----REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 9999998753 35899999999999999999999986 9999999999999999999999999998664322110
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
.......++..|+|||...+..++.++||||||+++|||++ |+.||+... ......++...
T Consensus 153 ----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~~~~~~~~~------ 214 (257)
T cd05060 153 ----------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAEVIAMLESG------ 214 (257)
T ss_pred ----------ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcC------
Confidence 01111234568999999999899999999999999999998 999986421 11111211111
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
.....+ ..++..+.+++.+|+..+|++||++.++++.|+++.
T Consensus 215 ----------~~~~~~-------~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 215 ----------ERLPRP-------EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ----------CcCCCC-------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 000001 124567899999999999999999999999998763
No 187
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-34 Score=315.21 Aligned_cols=250 Identities=19% Similarity=0.302 Sum_probs=201.1
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.+|+..+.||+|+||.||+|.. .+++.||+|.+...... ....+.+|+++++.++|+|++++++++......++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 4788889999999999999995 46889999998765443 356788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.. ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 99 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred cCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 999999998853 34789999999999999999999996 9999999999999999999999999987654221
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......|++.|+|||+..+..++.++|||||||++|+|++|+.||..... ...+...
T Consensus 171 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~----~~~~~~~----- 228 (296)
T cd06654 171 S-------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP----LRALYLI----- 228 (296)
T ss_pred c-------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH----HHhHHHH-----
Confidence 1 11123688999999999988889999999999999999999999863211 0000000
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
....... .+ ........+.+++.+|+..+|++||++.|++++
T Consensus 229 -------~~~~~~~--~~-----~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 229 -------ATNGTPE--LQ-----NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -------hcCCCCC--CC-----CccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0000000 00 012345678899999999999999999999986
No 188
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.5e-34 Score=313.45 Aligned_cols=254 Identities=25% Similarity=0.392 Sum_probs=198.5
Q ss_pred HHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecC-----
Q 042568 664 EATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKP----- 736 (983)
Q Consensus 664 ~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----- 736 (983)
.+++.|+..+.||+|+||.||+|... +++.||+|.+..... ....+.+|+++++++ +|||++++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc--cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 35677888899999999999999965 578899999865433 346788999999998 799999999998643
Q ss_pred -CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 737 -DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 737 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
...++||||+++++|.+++.... ...+++..+..++.|++.|++|||+.+ |+||||||+||++++++.++|+||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccC
Confidence 45789999999999999887532 346899999999999999999999986 999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCcccCC
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-----GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHD 890 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~ 890 (983)
|++....... .......|+..|+|||++. +..++.++||||+||++|||++|+.||+....
T Consensus 156 g~~~~~~~~~-------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~- 221 (272)
T cd06637 156 GVSAQLDRTV-------------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP- 221 (272)
T ss_pred CCceeccccc-------------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-
Confidence 9987653211 1122356899999999986 34578899999999999999999999853211
Q ss_pred CCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 891 GSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 891 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...... ...... +... ....+.++.+++.+|+..+|.+|||+.|++++
T Consensus 222 ---~~~~~~--------------~~~~~~---~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 222 ---MRALFL--------------IPRNPA---PRLK---SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred ---HHHHHH--------------HhcCCC---CCCC---CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 000000 000000 0000 11244678899999999999999999999864
No 189
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-38 Score=352.70 Aligned_cols=466 Identities=30% Similarity=0.391 Sum_probs=374.5
Q ss_pred eEEEEEcccCCcccccccccccCCCCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEecc
Q 042568 78 KVVELDLSARSIYGTISPALANLSSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLG 157 (983)
Q Consensus 78 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls 157 (983)
.++.|+++.|.+....-+.+...-.|+.|||++|.+. ..|..+..+.+|+.|+++.|.|. ..|.+.+++.+|++|.|.
T Consensus 22 ~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~ 99 (1081)
T KOG0618|consen 22 ALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLK 99 (1081)
T ss_pred HHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheec
Confidence 3777777777654322234444555999999999987 78888999999999999999998 888999999999999999
Q ss_pred CcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceeccccccc
Q 042568 158 NNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMF 237 (983)
Q Consensus 158 ~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 237 (983)
+|++. .+|.++. .+.+|++|++|+|.+. .+|.- +..++.+..+..++|..... ++... ++.++|..|.+
T Consensus 100 ~n~l~-~lP~~~~---~lknl~~LdlS~N~f~-~~Pl~-i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l 168 (1081)
T KOG0618|consen 100 NNRLQ-SLPASIS---ELKNLQYLDLSFNHFG-PIPLV-IEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVL 168 (1081)
T ss_pred cchhh-cCchhHH---hhhcccccccchhccC-CCchh-HHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhc
Confidence 99987 7888775 6889999999999987 56643 34678888888998832222 33333 88888999988
Q ss_pred ccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCc
Q 042568 238 SGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCN 317 (983)
Q Consensus 238 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N 317 (983)
.+.++.++ ..+.. .|+|++|.+.. ..+.++.+|+.|....|++.... ....+|+.|+.++|
T Consensus 169 ~~~~~~~i-~~l~~--~ldLr~N~~~~-----------~dls~~~~l~~l~c~rn~ls~l~-----~~g~~l~~L~a~~n 229 (1081)
T KOG0618|consen 169 GGSFLIDI-YNLTH--QLDLRYNEMEV-----------LDLSNLANLEVLHCERNQLSELE-----ISGPSLTALYADHN 229 (1081)
T ss_pred ccchhcch-hhhhe--eeecccchhhh-----------hhhhhccchhhhhhhhcccceEE-----ecCcchheeeeccC
Confidence 87776543 33333 49999998863 23677889999999999987432 11257999999999
Q ss_pred cccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcc
Q 042568 318 LIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPD 397 (983)
Q Consensus 318 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 397 (983)
.++...+ -..-.+|+++++++|+++ .+|++++.+.+|+.|...+|.++ .+|..+...++|+.|++.+|.++ .+|+
T Consensus 230 ~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~ 304 (1081)
T KOG0618|consen 230 PLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPP 304 (1081)
T ss_pred cceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCC
Confidence 9983322 223468999999999999 56799999999999999999996 78889999999999999999999 6777
Q ss_pred cccCcccchhhcccCccCCCCCccc-ccCCCC-CCEEEccCccccCcCCccccCCCccceeccccCCCCCCCCccccccc
Q 042568 398 SFANLSQLRRLLLYGNHLSGTIPSS-LGKCVN-LEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKM 475 (983)
Q Consensus 398 ~~~~l~~L~~L~l~~N~l~~~~p~~-l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l 475 (983)
....++.|+.|+|..|+|. .+|+. +..+.. |+.|+.+.|++....--.=.....|+. |++.+|+|+...-+.+.++
T Consensus 305 ~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~-LylanN~Ltd~c~p~l~~~ 382 (1081)
T KOG0618|consen 305 FLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQE-LYLANNHLTDSCFPVLVNF 382 (1081)
T ss_pred cccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHH-HHHhcCcccccchhhhccc
Confidence 8888999999999999998 55554 333433 888999999998433222234567776 9999999999888889999
Q ss_pred cccccccccccccccCCCc-ccccccccceEEeCCCcccccccccccCCCCccEEecCCccccCCcCccccCCCCcceEe
Q 042568 476 DMVLAIDLSFNNLSGSIPP-QLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSFQASPTLKQLN 554 (983)
Q Consensus 476 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ 554 (983)
.+|+.|+|++|+|. .+|. .+.++..|++|+||+|+|+ .+|.++..+..|++|...+|+|. ..| .+..++.|+.+|
T Consensus 383 ~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lD 458 (1081)
T KOG0618|consen 383 KHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLD 458 (1081)
T ss_pred cceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEe
Confidence 99999999999998 5554 6789999999999999999 68899999999999999999998 788 899999999999
Q ss_pred ccCCccccc-cCCCCCCcccccccccCCcCccC
Q 042568 555 FSFNKFSGN-ISNKGAFSSLTIASFQGNDGLCG 586 (983)
Q Consensus 555 l~~N~l~~~-~~~~~~~~~~~~~~~~~N~~lc~ 586 (983)
++.|+|+-. +|..-..+++..+++.||+++--
T Consensus 459 lS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~ 491 (1081)
T KOG0618|consen 459 LSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVF 491 (1081)
T ss_pred cccchhhhhhhhhhCCCcccceeeccCCccccc
Confidence 999999854 45544457888999999997554
No 190
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.6e-34 Score=319.94 Aligned_cols=263 Identities=27% Similarity=0.401 Sum_probs=206.0
Q ss_pred CCCCCCccccCCcEeEEEEEEC--------CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ--------DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDF 738 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 738 (983)
+|.+.+.||+|+||.||+|... .+..||+|.++........+++.+|+++++++ +||||+++++++...+.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 5788999999999999999742 12368999887655444567899999999999 89999999999999899
Q ss_pred eeEEEecccCcccccccccccC------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC
Q 042568 739 KALVLPLMSNGSLENHLYPSHG------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE 806 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~ 806 (983)
.++++||+++|+|.+++..... ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~~ 169 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVTE 169 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcC
Confidence 9999999999999998865321 1245889999999999999999999986 999999999999999
Q ss_pred CCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 042568 807 DLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTD 885 (983)
Q Consensus 807 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~ 885 (983)
++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYY-----------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred CCcEEECCcccceeccccccc-----------ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 999999999999865432111 01111234568999999999999999999999999999998 888875
Q ss_pred cccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 886 VLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 886 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.. ...++... +........+ ..++.++.+++.+|++.+|++||++.|+++.|+++
T Consensus 239 ~~-----~~~~~~~~-------------~~~~~~~~~~-------~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 239 GI-----PVEELFKL-------------LKEGHRMDKP-------ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred CC-----CHHHHHHH-------------HHcCCCCCCC-------CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 32 11111111 1110000001 12456789999999999999999999999999998
Q ss_pred Hhhc
Q 042568 966 KQYL 969 (983)
Q Consensus 966 ~~~~ 969 (983)
....
T Consensus 294 ~~~~ 297 (334)
T cd05100 294 LTVT 297 (334)
T ss_pred hhhc
Confidence 7543
No 191
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.8e-35 Score=328.30 Aligned_cols=260 Identities=20% Similarity=0.227 Sum_probs=200.3
Q ss_pred HHHHHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCC
Q 042568 661 QLIEATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPD 737 (983)
Q Consensus 661 ~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 737 (983)
++....++|...+.||+|+||.||+|... +++.||+|++.... .......+.+|+++++.++||||+++++++...+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34445678999999999999999999965 67889999986432 1223456788999999999999999999999999
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGI 817 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgl 817 (983)
..++||||+++|+|.+++.. ..++...+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 99999999999999998863 34788889999999999999999996 99999999999999999999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCCC----CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCc
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK----RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSS 893 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~ 893 (983)
++....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||... .
T Consensus 189 a~~~~~~~~------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~ 251 (371)
T cd05622 189 CMKMNKEGM------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----S 251 (371)
T ss_pred eeEcCcCCc------------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC-----C
Confidence 986542211 111235799999999998754 3788999999999999999999998632 1
Q ss_pred hHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCC--CCCHHHHHHHH
Q 042568 894 LHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPST--RPSMLDVAHEM 962 (983)
Q Consensus 894 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~L 962 (983)
.. ...............+ .......++.+++.+|+...+.+ ||+++|++++.
T Consensus 252 ~~------------~~~~~i~~~~~~~~~~-----~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 252 LV------------GTYSKIMNHKNSLTFP-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HH------------HHHHHHHcCCCcccCC-----CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 11 1111111111100011 01234567888999999844433 78999999875
No 192
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.6e-34 Score=318.11 Aligned_cols=273 Identities=21% Similarity=0.290 Sum_probs=201.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|...+.||+|+||.||+|... +++.||+|.+...........+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888999999999999999965 67889999987655444456788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
++ ++|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 86 ~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 97 5888877643 345889999999999999999999996 9999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......+......
T Consensus 159 ~-------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~--~~~~~~~~~~~~~ 223 (301)
T cd07873 159 K-------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV--EEQLHFIFRILGT 223 (301)
T ss_pred C-------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCC
Confidence 1 1112357889999998766 4578899999999999999999999864211 1111111111111
Q ss_pred CCcHHHHHHHhh--cCCCCCcccc----ccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIAK--YAPQHMPIYY----NKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
............ ......+... ..........+.+++.+|++.||.+|||++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 224 PTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred CChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111111111000 0000001000 00112245678899999999999999999999974
No 193
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.1e-34 Score=308.05 Aligned_cols=249 Identities=29% Similarity=0.406 Sum_probs=198.7
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEe-cCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICS-KPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~ 745 (983)
.+|...+.||+|+||.||+|... +..||+|.++... ..+.+.+|+.++++++|+|++++++++. .....++|+||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 35778899999999999999876 7889999885432 3467899999999999999999999764 45678999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.... ...+++..+..++.|++.||+|||+++ ++||||||+||++++++.+|++|||+++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 82 MAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred CCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 99999999887533 345889999999999999999999986 9999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
....++..|+|||+..+..++.++||||||+++|||++ |+.||... ...+..
T Consensus 157 ----------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~------ 209 (256)
T cd05082 157 ----------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVV------ 209 (256)
T ss_pred ----------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHH------
Confidence 11234578999999998889999999999999999998 99987521 111111
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
+.+........ ...++..+.+++.+|++.+|++|||+.++++.|+++
T Consensus 210 -------~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 210 -------PRVEKGYKMDA-------PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -------HHHhcCCCCCC-------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 11111111000 123457889999999999999999999999998764
No 194
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-35 Score=320.60 Aligned_cols=246 Identities=26% Similarity=0.410 Sum_probs=198.9
Q ss_pred ccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcccc
Q 042568 674 LIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSLE 752 (983)
Q Consensus 674 ~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 752 (983)
++|+|+||+||.|++. +..++|||-+...... ...-+..|+...++++|.|||+++|.+...++.-|.||-++||||.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr-~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR-EVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccch-hhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 6999999999999965 4566999988544333 4566889999999999999999999999999999999999999999
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeC-CCCCEEEccccccccccCCccccccc
Q 042568 753 NHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLD-EDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 753 ~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~-~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
+.+....+. -+=++.++--+.+||++||.|||++. |||||||-+|||++ -.|.+||+|||.++.+....
T Consensus 661 sLLrskWGP-lKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin------ 730 (1226)
T KOG4279|consen 661 SLLRSKWGP-LKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN------ 730 (1226)
T ss_pred HHHHhccCC-CccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCC------
Confidence 999865431 12277888899999999999999995 99999999999996 57899999999998775321
Q ss_pred CCCCccccccCccccccccccccccCCC--CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGK--RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPI 909 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 909 (983)
..+.++.||..|||||++..+ .|+..+|||||||++.||.||++||..+...+. .+.+
T Consensus 731 -------P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---AMFk---------- 790 (1226)
T KOG4279|consen 731 -------PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---AMFK---------- 790 (1226)
T ss_pred -------ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---hhhh----------
Confidence 233456899999999999864 589999999999999999999999975533221 1111
Q ss_pred HHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 910 VEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
-.+-+.. ....++...+...++.+|+..||.+||+++++++
T Consensus 791 --VGmyKvH--------P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 791 --VGMYKVH--------PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred --hcceecC--------CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 0010111 1123568889999999999999999999999986
No 195
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.9e-34 Score=310.71 Aligned_cols=259 Identities=25% Similarity=0.405 Sum_probs=202.5
Q ss_pred CCCCCCccccCCcEeEEEEEECC-C---cEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQD-N---TRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~-~---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
.|...+.||+|+||.||+|.... + ..||||.++.........+|..|++++++++||||+++++++......++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46678899999999999999653 3 3599999876544445678999999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++... ...+++..++.++.|++.|++|||+.+ ++||||||+||+++.++.++++|||.+.....
T Consensus 85 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 85 EFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred ecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence 999999999988653 345899999999999999999999986 99999999999999999999999999886643
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
...... +... .....+..|+|||++.+..++.++||||||+++||+++ |+.||.... ......++
T Consensus 159 ~~~~~~-------~~~~-~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~--~~~~~~~i---- 224 (269)
T cd05065 159 DTSDPT-------YTSS-LGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVINAI---- 224 (269)
T ss_pred Cccccc-------cccc-cCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC--HHHHHHHH----
Confidence 221100 0000 00112457999999999999999999999999999887 999985321 01111111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
..... .+. ..+++..+.+++.+|++.+|.+||++.+++..|+++
T Consensus 225 ------------~~~~~--~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 225 ------------EQDYR--LPP-----PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------------HcCCc--CCC-----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11000 110 123556788999999999999999999999998764
No 196
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-34 Score=326.44 Aligned_cols=273 Identities=21% Similarity=0.185 Sum_probs=198.1
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCC-----
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPD----- 737 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 737 (983)
..++|...+.||+|+||.||+|... +++.||||.+..... .....++.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3478999999999999999999964 688999999865432 234567889999999999999999999986443
Q ss_pred -ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 738 -FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 738 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
..++||||+++ ++.+.+. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCC
Confidence 46899999975 5555443 24788899999999999999999996 9999999999999999999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~ 896 (983)
+++...... ......||+.|+|||.+.+..++.++||||+||++|+|++|+.||..... ...+..
T Consensus 169 ~a~~~~~~~--------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~-~~~~~~ 233 (359)
T cd07876 169 LARTACTNF--------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH-IDQWNK 233 (359)
T ss_pred CccccccCc--------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHH
Confidence 997543211 11224689999999999999999999999999999999999999864311 111111
Q ss_pred HHHhhCCCCCcHH-------HHHHHhhcCCCCCcc-----------ccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHH
Q 042568 897 WVKRHYPHRLDPI-------VEKAIAKYAPQHMPI-----------YYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDV 958 (983)
Q Consensus 897 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 958 (983)
..... .....+. +.............. ...........++.+++.+|++.||++|||+.|+
T Consensus 234 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~ 312 (359)
T cd07876 234 VIEQL-GTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEA 312 (359)
T ss_pred HHHhc-CCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHH
Confidence 11111 1100010 111000000000000 0000001134578999999999999999999999
Q ss_pred HHHHH
Q 042568 959 AHEMG 963 (983)
Q Consensus 959 l~~L~ 963 (983)
+++-.
T Consensus 313 l~hp~ 317 (359)
T cd07876 313 LRHPY 317 (359)
T ss_pred hcCch
Confidence 98753
No 197
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.1e-34 Score=322.80 Aligned_cols=241 Identities=25% Similarity=0.301 Sum_probs=187.3
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHH-HHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQ-ILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.||+|+||.||+|+.. +++.||+|++..... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 567899999865421 112234444444 56778999999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+.+..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--- 150 (325)
T cd05602 81 GELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--- 150 (325)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC---
Confidence 999988864 345788889999999999999999996 9999999999999999999999999987532211
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~----------- 204 (325)
T cd05602 151 ----------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEM----------- 204 (325)
T ss_pred ----------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC-----HHHH-----------
Confidence 11223569999999999999999999999999999999999999985321 1111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVA 959 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 959 (983)
.+........ . .......+.+++.+|++.+|.+||++.+.+
T Consensus 205 -~~~i~~~~~~--~-------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 205 -YDNILNKPLQ--L-------KPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred -HHHHHhCCcC--C-------CCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 1111111000 0 012456788999999999999999987443
No 198
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5e-34 Score=307.39 Aligned_cols=252 Identities=33% Similarity=0.478 Sum_probs=203.2
Q ss_pred CccccCCcEeEEEEEECC----CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQD----NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.||+|+||.||+|.... +..||+|.++........+.+.+|+++++.++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999754 7789999997665544568899999999999999999999999999999999999999
Q ss_pred cccccccccccCc-----CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 749 GSLENHLYPSHGL-----SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 749 gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
++|.+++...... ...+++..++.++.|+++|++|||+.+ ++||||||+||++++++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999998764211 356899999999999999999999986 99999999999999999999999999987654
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.... .......++..|+|||...+..++.++||||+|+++|||++ |+.||.... ..+
T Consensus 158 ~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~------ 215 (262)
T cd00192 158 DDYY-----------RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-----NEE------ 215 (262)
T ss_pred cccc-----------ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC-----HHH------
Confidence 3211 11122457889999999988889999999999999999999 699986431 111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
..+... .......+ ..++.++.+++.+|++.+|++|||+.|++++|+
T Consensus 216 ------~~~~~~-~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 216 ------VLEYLR-KGYRLPKP-------EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ------HHHHHH-cCCCCCCC-------ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111111 11110111 224578999999999999999999999998873
No 199
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=7.8e-34 Score=309.07 Aligned_cols=259 Identities=24% Similarity=0.409 Sum_probs=204.5
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCc----EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNT----RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
++|...+.||+|+||.||+|.+. +++ .||+|.............+.+|++++++++|||++++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46778899999999999999864 333 5899988766554456789999999999999999999999987 78899
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
|+||+++|+|.+++... ...+++..+..++.|+++|++|||+.+ ++||||||+||+++.++.+||+|||.++..
T Consensus 86 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccc
Confidence 99999999999998754 235899999999999999999999985 999999999999999999999999999876
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~ 900 (983)
....... ......++..|+|||.+....++.++||||||+++||+++ |+.||+... ..+
T Consensus 160 ~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~---- 219 (279)
T cd05057 160 DVDEKEY-----------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-----AVE---- 219 (279)
T ss_pred cCcccce-----------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-----HHH----
Confidence 5322110 0011224578999999988889999999999999999999 999986421 111
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
+...+........+ ..+..++.+++.+||..+|.+||++.++++.++++.+.
T Consensus 220 ---------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 220 ---------IPDLLEKGERLPQP-------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ---------HHHHHhCCCCCCCC-------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 11111111111111 11345788999999999999999999999999998653
No 200
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.4e-34 Score=324.62 Aligned_cols=271 Identities=21% Similarity=0.252 Sum_probs=197.3
Q ss_pred HHhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecC-----
Q 042568 664 EATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKP----- 736 (983)
Q Consensus 664 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 736 (983)
+..++|...+.||+|+||.||+|.. .+++.||||.+...... .....+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 4567899999999999999999995 46788999998654322 2345678899999999999999999987533
Q ss_pred -CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 737 -DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 737 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
...++++|++ +++|.+++. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCC
Confidence 3468999988 678887765 345899999999999999999999996 999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCch
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSL 894 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l 894 (983)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..... ...+
T Consensus 163 g~~~~~~~~----------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~ 225 (343)
T cd07878 163 GLARQADDE----------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-IDQL 225 (343)
T ss_pred ccceecCCC----------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHH
Confidence 999865321 112468999999999877 5688999999999999999999999853210 0111
Q ss_pred HHHHHhhCCCCCcHH--------HHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 895 HEWVKRHYPHRLDPI--------VEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 895 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
..+...... ...+. ....+.... ..........+......+.+++.+|+..||++|||++|++++=
T Consensus 226 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 226 KRIMEVVGT-PSPEVLKKISSEHARKYIQSLP-HMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred HHHHHHhCC-CCHHHHHhcchhhHHHHhhccc-cccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 111111000 00000 001111000 0000000001112334578999999999999999999999763
No 201
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.8e-34 Score=317.73 Aligned_cols=199 Identities=25% Similarity=0.360 Sum_probs=159.5
Q ss_pred CCccccCCcEeEEEEEEC---CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEec--CCceeEEEecc
Q 042568 672 SSLIGSGRFGHVYKGVLQ---DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSK--PDFKALVLPLM 746 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 746 (983)
.++||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....++|+||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 468999999999999864 45789999985432 23567889999999999999999998854 34678999999
Q ss_pred cCcccccccccccC-----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEe----CCCCCEEEccccc
Q 042568 747 SNGSLENHLYPSHG-----LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILL----DEDLTALVADFGI 817 (983)
Q Consensus 747 ~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl----~~~~~~kl~Dfgl 817 (983)
.+ ++.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ +..+.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 64 77666543211 1235899999999999999999999996 9999999999999 4667899999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcc
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVL 887 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~ 887 (983)
|+........ ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 159 a~~~~~~~~~----------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 159 ARLFNSPLKP----------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCCcc----------ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9876432111 011223578999999999877 45889999999999999999999999643
No 202
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.5e-34 Score=320.27 Aligned_cols=280 Identities=18% Similarity=0.246 Sum_probs=199.0
Q ss_pred CCCccccC--CcEeEEEEEE-CCCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 671 PSSLIGSG--RFGHVYKGVL-QDNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 671 ~~~~iG~G--~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
..++||+| +|++||++.. .+|+.||+|.++.... .+....+.+|+++++.++||||+++++++..++..++|+||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 7899999985 4788999999976543 234566788999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++++||+.+........
T Consensus 82 ~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 9999999886432 335899999999999999999999986 99999999999999999999999987654332111
Q ss_pred cccccCCCCccccccCccccccccccccccCC--CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG--KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
..... ........++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..........+.
T Consensus 157 ~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~ 229 (327)
T cd08227 157 RLRVV------HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKLNGTVPC 229 (327)
T ss_pred ccccc------ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH-HHHHHhcCCccc
Confidence 10000 011122357788999999876 458899999999999999999999996432111 111111111111
Q ss_pred CCcH--HHHHHHh-------------h------cCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 905 RLDP--IVEKAIA-------------K------YAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 905 ~~~~--~~~~~~~-------------~------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
..+. ....... . ...................++.+++.+|+++||++|||++|++++-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p 308 (327)
T cd08227 230 LLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS 308 (327)
T ss_pred cccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence 0000 0000000 0 0000000000001123456789999999999999999999999753
No 203
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.3e-34 Score=316.89 Aligned_cols=272 Identities=23% Similarity=0.299 Sum_probs=196.0
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcc-hhHHHHHHHHHHHhc---CCCCccceeeEEec-----CC
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGE-ITGSFKRECQILKRI---RHRNLIRIITICSK-----PD 737 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 737 (983)
+|++.+.||+|+||.||+|... +++.||+|.++...... ....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778899999999999999965 68889999986543222 234566788877766 69999999998854 24
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGI 817 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgl 817 (983)
..++||||+++ ++.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCc
Confidence 57899999985 7877776432 345899999999999999999999996 99999999999999999999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHH
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEW 897 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~ 897 (983)
++....... .....||..|+|||++.+..++.++||||+||++|||++|+.||..... ...+...
T Consensus 155 ~~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~-~~~~~~~ 219 (288)
T cd07863 155 ARIYSCQMA--------------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKI 219 (288)
T ss_pred cccccCccc--------------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH-HHHHHHH
Confidence 986542211 1124689999999999998999999999999999999999999853211 1111121
Q ss_pred HHhhCCCCCcHHHHHHHh---hcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 898 VKRHYPHRLDPIVEKAIA---KYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
........ ......... .......+........+...++.+++.+|++.||++|||+.|++++
T Consensus 220 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 220 FDLIGLPP-EDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred HHHhCCCC-hhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11110000 000000000 0000000111111123355678999999999999999999999864
No 204
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6e-34 Score=308.33 Aligned_cols=252 Identities=27% Similarity=0.384 Sum_probs=195.9
Q ss_pred CccccCCcEeEEEEEECC-Cc--EEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQD-NT--RIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
++||+|+||.||+|...+ +. .+|+|.++.....+....+.+|+++++++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999753 43 46888886544444567889999999999 799999999999999999999999999
Q ss_pred cccccccccccC------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 749 GSLENHLYPSHG------------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 749 gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
|+|.+++..... ....+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 999998865321 1235889999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLH 895 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~ 895 (983)
++...... ........+..|+|||++.+..++.++||||||+++|||++ |+.||.... ..
T Consensus 158 l~~~~~~~--------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----~~ 218 (270)
T cd05047 158 LSRGQEVY--------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CA 218 (270)
T ss_pred Cccccchh--------------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC-----HH
Confidence 98532210 00011234567999999988889999999999999999997 999985321 11
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
+. .+... ....... ...+..++.+++.+|++.+|.+|||+.|+++.|+++.
T Consensus 219 ~~------------~~~~~-~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 219 EL------------YEKLP-QGYRLEK-------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HH------------HHHHh-CCCCCCC-------CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11 11110 0000000 1124467889999999999999999999999998764
No 205
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.9e-34 Score=320.21 Aligned_cols=242 Identities=23% Similarity=0.316 Sum_probs=191.9
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 743 (983)
+|...+.||+|+||.||+|... +++.||+|++.... .....+.+..|.++++.+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999965 68899999987542 2223466788999998885 577888999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999988864 245899999999999999999999996 99999999999999999999999999875321
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 154 ~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-------------- 206 (323)
T cd05615 154 DG-------------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-------------- 206 (323)
T ss_pred CC-------------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--------------
Confidence 11 111234699999999999998999999999999999999999999864210
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM 955 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 955 (983)
....+....... ..+ .....++.+++.+|++.+|.+|++.
T Consensus 207 ---~~~~~~i~~~~~--~~p-------~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 207 ---DELFQSIMEHNV--SYP-------KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---HHHHHHHHhCCC--CCC-------ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 111111111111 011 1234678899999999999999985
No 206
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.6e-34 Score=308.04 Aligned_cols=254 Identities=24% Similarity=0.353 Sum_probs=201.4
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCc----chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTG----EITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
++|...+.||+|++|.||+|.. .+++.||+|.+...... .....+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788899999999999999995 46889999998654321 124578899999999999999999999999999999
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
|+||+++++|.+++... ..+++..+..++.|++.|++|||+.+ |+||||||+||++++++.++|+|||+++..
T Consensus 82 v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY----GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 99999999999988643 35788999999999999999999996 999999999999999999999999999765
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
...... ........|+..|+|||+..+..++.++||||+|+++|||++|+.||... .......
T Consensus 155 ~~~~~~----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~----~~~~~~~--- 217 (263)
T cd06625 155 QTICSS----------GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF----EAMAAIF--- 217 (263)
T ss_pred cccccc----------cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc----chHHHHH---
Confidence 432111 01112245788999999999988999999999999999999999998532 1111100
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...........+ ......+.+++.+|+..+|.+||++.|++++
T Consensus 218 ----------~~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 218 ----------KIATQPTNPQLP-------SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ----------HHhccCCCCCCC-------ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000000000011 2245678899999999999999999999876
No 207
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.1e-34 Score=307.28 Aligned_cols=251 Identities=26% Similarity=0.365 Sum_probs=199.1
Q ss_pred CccccCCcEeEEEEEECC--Cc--EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQD--NT--RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~--~~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
++||+|++|.||+|.+.+ ++ .||||.+......+..+++.+|++++++++||||+++++++.. ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999643 32 5899998765543456789999999999999999999999988 888999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
++|.+++..... ..+++..++.++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999875432 46899999999999999999999996 9999999999999999999999999998765322111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+...
T Consensus 155 ----------~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~-------- 211 (257)
T cd05040 155 ----------VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG-----SQILK-------- 211 (257)
T ss_pred ----------ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH--------
Confidence 11112457889999999998889999999999999999999 9999853211 11111
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
........ .+ .....+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 212 ----~~~~~~~~--~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 212 ----KIDKEGER--LE-----RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----HHHhcCCc--CC-----CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 11100000 00 00124567899999999999999999999999875
No 208
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.1e-34 Score=314.23 Aligned_cols=252 Identities=23% Similarity=0.320 Sum_probs=198.0
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
|+..+.||+|+||+||+|... +++.||+|.+...... .....+.+|++++++++|+|++++.+++...+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999964 6889999998654321 2345678899999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMG--NPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 99999998886432 346999999999999999999999986 9999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
......|+..|+|||++.+..++.++||||+|+++|||++|+.||...... ...
T Consensus 157 --------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~-~~~----------- 210 (285)
T cd05632 157 --------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK-VKR----------- 210 (285)
T ss_pred --------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-HHH-----------
Confidence 111246899999999999989999999999999999999999998632110 000
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS-----MLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 961 (983)
..+...+...... .......++.+++..|++.||++||+ +.+++++
T Consensus 211 --~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 211 --EEVDRRVLETEEV--------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --HHHHHhhhccccc--------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 0011111110000 01224467889999999999999999 6677765
No 209
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.3e-34 Score=321.49 Aligned_cols=238 Identities=25% Similarity=0.356 Sum_probs=186.0
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHH-HHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQ-ILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
++||+|+||.||+|+.. +++.||+|++..... ......+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 678899999865421 122344555554 57889999999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|..++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 150 (321)
T cd05603 81 GELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--- 150 (321)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC---
Confidence 999887764 345788999999999999999999986 9999999999999999999999999987432111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||.+.+..++.++||||+||++|||++|+.||... +...
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~------------ 203 (321)
T cd05603 151 ----------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DVSQ------------ 203 (321)
T ss_pred ----------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC-----CHHH------------
Confidence 1112346999999999999989999999999999999999999998532 1111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSML 956 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 956 (983)
..+..... +...+ .....++.+++.+|++.+|.+||++.
T Consensus 204 ~~~~i~~~--~~~~~-------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 204 MYDNILHK--PLQLP-------GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHhcC--CCCCC-------CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11111111 00111 11345788999999999999999764
No 210
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.7e-34 Score=321.02 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=194.4
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.||+|+||.||+|... +++.||+|+++.... .+..+.+.+|+.++.++ +||+|+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 578899999975432 23456688999999888 699999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--- 150 (327)
T cd05617 81 GDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--- 150 (327)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC---
Confidence 999887764 345899999999999999999999996 9999999999999999999999999987432111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCC-CchHHHHHhhCCCCCc
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDG-SSLHEWVKRHYPHRLD 907 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~-~~l~~~~~~~~~~~~~ 907 (983)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||+...... ....+
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~----------- 209 (327)
T cd05617 151 ----------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTED----------- 209 (327)
T ss_pred ----------CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHH-----------
Confidence 11123569999999999999999999999999999999999999996432211 11111
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH------HHHHHH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM------LDVAHE 961 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~evl~~ 961 (983)
.....+... +...| .....++.+++.+|++.||++||++ ++++++
T Consensus 210 -~~~~~~~~~-~~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 210 -YLFQVILEK-PIRIP-------RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred -HHHHHHHhC-CCCCC-------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 111111111 11111 1234678899999999999999984 577654
No 211
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.9e-34 Score=311.48 Aligned_cols=256 Identities=26% Similarity=0.415 Sum_probs=200.4
Q ss_pred CCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
+|...++||+|+||.||+|... ++..+|+|.+.... ......+.+|++++++++|+||+++++++...+..++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 5667889999999999999742 35578999876443 2345689999999999999999999999999999999
Q ss_pred EEecccCcccccccccccC-----------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCE
Q 042568 742 VLPLMSNGSLENHLYPSHG-----------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTA 810 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~ 810 (983)
++||+++++|.+++..... ....+++..++.++.|++.|++|||+.+ ++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999998865321 1135899999999999999999999986 9999999999999999999
Q ss_pred EEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccC
Q 042568 811 LVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFH 889 (983)
Q Consensus 811 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~ 889 (983)
+|+|||++..+...... .......+++.|+|||+..+..++.++|||||||++|||++ |+.||.....
T Consensus 162 kL~dfg~~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 230 (280)
T cd05092 162 KIGDFGMSRDIYSTDYY-----------RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230 (280)
T ss_pred EECCCCceeEcCCCcee-----------ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH
Confidence 99999999765422110 11122346788999999999999999999999999999998 8998753211
Q ss_pred CCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 890 DGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 890 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
. ...+........ ..+ ..++..+.+++.+||+.||++||++.||.+.|+
T Consensus 231 --~---------------~~~~~~~~~~~~-~~~-------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 231 --T---------------EAIECITQGREL-ERP-------RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred --H---------------HHHHHHHcCccC-CCC-------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 0 011111111000 001 124567889999999999999999999999886
No 212
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=5.8e-34 Score=306.91 Aligned_cols=255 Identities=33% Similarity=0.515 Sum_probs=204.6
Q ss_pred hCCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.++|.+.++||+|+||.||+|...++..||||.+..... ..+++.+|++++++++|+|++++++++......++||||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM--SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc--CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 357888999999999999999988788899999865433 357799999999999999999999999988899999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.... ...+++..+..++.|++.|++|||+.+ ++|+||||+||+++.++.++++|||.++......
T Consensus 83 ~~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 83 MSKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred cCCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 99999999987543 346899999999999999999999996 9999999999999999999999999998664311
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
.. ......++..|+|||.+.+..++.++||||+|+++||+++ |+.||..... .
T Consensus 158 ~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~--------- 211 (261)
T cd05034 158 YT------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-----R--------- 211 (261)
T ss_pred hh------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----H---------
Confidence 00 0011234568999999999889999999999999999999 9999853210 0
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
...+........ ..+ .+.+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 212 ---~~~~~~~~~~~~-~~~-------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 212 ---EVLEQVERGYRM-PRP-------PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ---HHHHHHHcCCCC-CCC-------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 111111111000 000 1235678999999999999999999999998874
No 213
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-34 Score=344.70 Aligned_cols=258 Identities=20% Similarity=0.321 Sum_probs=199.0
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEec--CCcee
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSK--PDFKA 740 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 740 (983)
..++|.+.+.||+|+||+||+|... ++..||+|.+..... ......+..|+.++++++||||++++++|.. ....+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4468999999999999999999965 567799999865432 2345778999999999999999999998854 35679
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCC----CCeEeecCCCCCeEeCC----------
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSP----IKVVHCDLKPSNILLDE---------- 806 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~----~~ivH~Dikp~NiLl~~---------- 806 (983)
+||||+++|+|.+++.........+++..++.|+.||+.||+|||+.+. .+||||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 9999999999999987543334569999999999999999999998541 24999999999999964
Q ss_pred -------CCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCC--CCCCccchhHHHHHHHHHH
Q 042568 807 -------DLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG--KRASTHGDVYSFGVLLLEI 877 (983)
Q Consensus 807 -------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~SlG~il~el 877 (983)
...+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s--------------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYEL 236 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIES--------------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL 236 (1021)
T ss_pred cccccCCCCceEEccCCccccccccc--------------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHH
Confidence 3458999999998653211 1123469999999999864 4588999999999999999
Q ss_pred HhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHH
Q 042568 878 VTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLD 957 (983)
Q Consensus 878 ltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 957 (983)
++|+.||... .....++.. +..... .+ ....+.++.+++..||..+|.+||++.|
T Consensus 237 LTGk~PF~~~----~~~~qli~~-------------lk~~p~--lp------i~~~S~eL~dLI~~~L~~dPeeRPSa~Q 291 (1021)
T PTZ00266 237 CSGKTPFHKA----NNFSQLISE-------------LKRGPD--LP------IKGKSKELNILIKNLLNLSAKERPSALQ 291 (1021)
T ss_pred HHCCCCCCcC----CcHHHHHHH-------------HhcCCC--CC------cCCCCHHHHHHHHHHhcCChhHCcCHHH
Confidence 9999998531 111111111 111110 01 0123467899999999999999999999
Q ss_pred HHHH
Q 042568 958 VAHE 961 (983)
Q Consensus 958 vl~~ 961 (983)
++++
T Consensus 292 lL~h 295 (1021)
T PTZ00266 292 CLGY 295 (1021)
T ss_pred Hhcc
Confidence 9854
No 214
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=7.7e-34 Score=312.79 Aligned_cols=259 Identities=25% Similarity=0.454 Sum_probs=201.5
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCc----EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNT----RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
++|...+.||+|+||.||+|.+. +++ .||+|.+...........+.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 46777899999999999999854 444 47899886554444455788999999999999999999998754 4679
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
++||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccc
Confidence 99999999999988643 235889999999999999999999986 999999999999999999999999999866
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~ 900 (983)
...... .......++..|+|||++.+..++.++||||||+++|||++ |+.||.... .....+++.
T Consensus 160 ~~~~~~-----------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~~- 225 (303)
T cd05110 160 EGDEKE-----------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLE- 225 (303)
T ss_pred cCcccc-----------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH-
Confidence 432211 01112346778999999999999999999999999999998 899985321 111111111
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
.......+ ..+...+.+++.+||..+|++||+++++++.++++.+.
T Consensus 226 ---------------~~~~~~~~-------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 226 ---------------KGERLPQP-------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ---------------CCCCCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11100000 11345788999999999999999999999999987544
No 215
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.5e-34 Score=308.50 Aligned_cols=256 Identities=25% Similarity=0.364 Sum_probs=189.0
Q ss_pred CccccCCcEeEEEEEECC---CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCc
Q 042568 673 SLIGSGRFGHVYKGVLQD---NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
+.||+|+||.||+|...+ ...+|+|.+...........+.+|+++++.++||||+++++++......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 358999999999997543 34688888765544444567889999999999999999999999999999999999999
Q ss_pred ccccccccccCc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 750 SLENHLYPSHGL-SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 750 sL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
+|.+++...... ....++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~- 156 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY- 156 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhe-
Confidence 999998764422 234567888999999999999999996 999999999999999999999999998754321110
Q ss_pred cccCCCCccccccCccccccccccccccC-------CCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHh
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGM-------GKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~ 900 (983)
.......++..|+|||+.. ...++.++|||||||++|||++ |..||..... .
T Consensus 157 ----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~--------- 216 (269)
T cd05042 157 ----------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD-E--------- 216 (269)
T ss_pred ----------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-H---------
Confidence 0112234677899999864 3456889999999999999999 7778753210 0
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
......+..... ..+.. .........+.+++..|+ .||++||+++||++.|.
T Consensus 217 -------~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 217 -------QVLKQVVREQDI-KLPKP--QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred -------HHHHHHhhccCc-cCCCC--cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 011111111110 00000 001123456677788888 59999999999998863
No 216
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.5e-35 Score=321.87 Aligned_cols=193 Identities=27% Similarity=0.403 Sum_probs=168.9
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-C-----CCccceeeEEecCCcee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-H-----RNLIRIITICSKPDFKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~ 740 (983)
+|.+.++||+|+||.|-||.+ .+++.||||+++... ....+...|+.+|..++ | -|+|+++++|....+.+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k--~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK--RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh--HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 788999999999999999994 579999999996543 34567788999999996 4 48999999999999999
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC--CCEEEcccccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED--LTALVADFGIA 818 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~--~~~kl~Dfgla 818 (983)
||+|.++. +|.++++... -..++...++.++.||+.||.+||+.+ |||+||||+|||+.+. ..+||+|||.|
T Consensus 265 iVfELL~~-NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 265 IVFELLST-NLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eeehhhhh-hHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccc
Confidence 99999964 9999998765 456999999999999999999999986 9999999999999754 47999999999
Q ss_pred ccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 042568 819 KLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPT 884 (983)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~ 884 (983)
......- -+++-+..|+|||++.|.+|+.+.|+||||||+.||++|.+-|
T Consensus 339 c~~~q~v----------------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLf 388 (586)
T KOG0667|consen 339 CFESQRV----------------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLF 388 (586)
T ss_pred cccCCcc----------------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcccc
Confidence 8765321 1357788999999999999999999999999999999997655
No 217
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-34 Score=327.48 Aligned_cols=265 Identities=19% Similarity=0.225 Sum_probs=198.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|+..+.||+|+||.||+|... +++.||||++.... ..+....+.+|++++.+++||+|+++++++...+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36788899999999999999965 68889999986432 2234567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999998864 345899999999999999999999996 99999999999999999999999999876532
Q ss_pred Cccccccc------CCC------------C----ccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCC
Q 042568 824 IDESVNCA------NDS------------M----SFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGR 881 (983)
Q Consensus 824 ~~~~~~~~------~~~------------~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~ 881 (983)
........ ... . .........+||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 21100000 000 0 0000112347999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC---HHHH
Q 042568 882 RPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS---MLDV 958 (983)
Q Consensus 882 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ev 958 (983)
.||..... . +..............+.. .....++.+++.+|+. +|++|++ +.|+
T Consensus 234 ~Pf~~~~~-----~------------~~~~~i~~~~~~~~~p~~-----~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei 290 (360)
T cd05627 234 PPFCSETP-----Q------------ETYRKVMNWKETLVFPPE-----VPISEKAKDLILRFCT-DSENRIGSNGVEEI 290 (360)
T ss_pred CCCCCCCH-----H------------HHHHHHHcCCCceecCCC-----CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHH
Confidence 99863211 1 111111110000001100 0134567778888764 9999984 7788
Q ss_pred HHH
Q 042568 959 AHE 961 (983)
Q Consensus 959 l~~ 961 (983)
++|
T Consensus 291 ~~h 293 (360)
T cd05627 291 KSH 293 (360)
T ss_pred hcC
Confidence 766
No 218
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.1e-34 Score=310.42 Aligned_cols=251 Identities=26% Similarity=0.384 Sum_probs=203.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|...+.||.|++|.||+|... +++.||+|.+...........+.+|+++++.++|+|++++++++......++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36778899999999999999965 68889999987665444567789999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.. ..+++..++.++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 999999998874 26899999999999999999999986 9999999999999999999999999998765321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......|+..|+|||+..+..++.++||||||+++|+|++|+.||...... ..
T Consensus 153 ~-------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~-------- 206 (274)
T cd06609 153 S-------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RV-------- 206 (274)
T ss_pred c-------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HH--------
Confidence 1 112246888999999999988999999999999999999999998642110 00
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
... +..... +.... ...+.++.+++.+|+..+|++||++++++++=
T Consensus 207 ----~~~-~~~~~~---~~~~~---~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~ 252 (274)
T cd06609 207 ----LFL-IPKNNP---PSLEG---NKFSKPFKDFVSLCLNKDPKERPSAKELLKHK 252 (274)
T ss_pred ----HHH-hhhcCC---CCCcc---cccCHHHHHHHHHHhhCChhhCcCHHHHhhCh
Confidence 000 000000 00000 01346788999999999999999999998753
No 219
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.3e-34 Score=312.06 Aligned_cols=272 Identities=24% Similarity=0.339 Sum_probs=206.7
Q ss_pred CCCCCCccccCCcEeEEEEEEC-----CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEec--CCcee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-----DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSK--PDFKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 740 (983)
.|...+.||+|+||.||+|.+. ++..||||.++..........|.+|+++++.++||||+++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4666789999999999999854 3678999999765443346789999999999999999999999877 55789
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||.+..
T Consensus 85 lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 999999999999998753 235899999999999999999999986 99999999999999999999999999987
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
........ .......++..|+|||...+..++.++||||||+++|||++|+.|+........ .+...
T Consensus 159 ~~~~~~~~----------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~---~~~~~ 225 (284)
T cd05038 159 LPEDKDYY----------YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL---RMIGI 225 (284)
T ss_pred cccCCcce----------eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhc---ccccc
Confidence 65322110 111112455679999999988899999999999999999999999754321110 00000
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.............+........ ...++.++.+++.+|++.+|++||++.||+++|+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 226 AQGQMIVTRLLELLKEGERLPR-------PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccccccHHHHHHHHHcCCcCCC-------CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0011111111222211111100 123457799999999999999999999999999876
No 220
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.4e-34 Score=305.45 Aligned_cols=239 Identities=24% Similarity=0.382 Sum_probs=186.1
Q ss_pred CccccCCcEeEEEEEECC-------------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCce
Q 042568 673 SLIGSGRFGHVYKGVLQD-------------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFK 739 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~-------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 739 (983)
+.||+|+||.||+|...+ ...||+|.++.... .....+.+|+.+++.++||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR-DISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh-hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 468999999999998542 22488898755432 3456788899999999999999999999999999
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCC-------EEE
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLT-------ALV 812 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~-------~kl 812 (983)
++||||+++|+|..++... ...+++..++.++.|+++|++|||+.+ |+||||||+||+++.++. +++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRK---SDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEe
Confidence 9999999999998887643 245899999999999999999999986 999999999999987664 899
Q ss_pred ccccccccccCCcccccccCCCCccccccCccccccccccccccC-CCCCCccchhHHHHHHHHHHH-hCCCCCCcccCC
Q 042568 813 ADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-GKRASTHGDVYSFGVLLLEIV-TGRRPTDVLFHD 890 (983)
Q Consensus 813 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~k~Dv~SlG~il~ell-tg~~p~~~~~~~ 890 (983)
+|||++...... ....|+..|+|||.+. +..++.++|||||||++|||+ +|+.||....
T Consensus 154 ~d~g~~~~~~~~-----------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-- 214 (262)
T cd05077 154 SDPGIPITVLSR-----------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT-- 214 (262)
T ss_pred CCCCCCccccCc-----------------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc--
Confidence 999998654311 1235788999999886 467899999999999999998 5888764311
Q ss_pred CCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 891 GSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 891 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
..+ ............ .....++.+++.+||+.||++||++.++++++
T Consensus 215 ---~~~-------------~~~~~~~~~~~~---------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 215 ---LAE-------------KERFYEGQCMLV---------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ---hhH-------------HHHHHhcCccCC---------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 011111101000 01235688999999999999999999999876
No 221
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.4e-34 Score=321.91 Aligned_cols=239 Identities=24% Similarity=0.327 Sum_probs=187.2
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHH-HHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQ-ILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.||+|+||.||+|+.. +|+.||+|++..... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999964 688999999865421 223345556655 46778999999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|..++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--- 150 (325)
T cd05604 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--- 150 (325)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC---
Confidence 999888764 346899999999999999999999996 9999999999999999999999999987432111
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~-----~~~~------------ 203 (325)
T cd05604 151 ----------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR-----DVAE------------ 203 (325)
T ss_pred ----------CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC-----CHHH------------
Confidence 1112356999999999999999999999999999999999999998532 1111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLD 957 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 957 (983)
..+........ .+ .....++.+++.+|++.+|++||++.+
T Consensus 204 ~~~~~~~~~~~--~~-------~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 204 MYDNILHKPLV--LR-------PGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHcCCcc--CC-------CCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 11111111100 00 113456889999999999999998853
No 222
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2e-34 Score=321.16 Aligned_cols=256 Identities=23% Similarity=0.240 Sum_probs=195.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|.+.+.||+|+||.||+++.. +++.||+|++.... .....+.+.+|+.+++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999965 68899999986432 1223466889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 999999999998642 345889999999999999999999996 99999999999999999999999999876543
Q ss_pred CcccccccCCCCccccccCccccccccccccccCC-----CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-----KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
... .......||+.|+|||++.. ..++.++||||+||++|||++|+.||... ...+.
T Consensus 155 ~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~-----~~~~~- 216 (331)
T cd05597 155 DGT------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVET- 216 (331)
T ss_pred CCC------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC-----CHHHH-
Confidence 211 01122469999999999863 45788999999999999999999998531 11111
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCC--CCCCCCCHHHHHHH
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQY--NPSTRPSMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~--dP~~RPs~~evl~~ 961 (983)
.............+. .....+.++.+++.+|+.. ++..||++++++++
T Consensus 217 -----------~~~i~~~~~~~~~~~----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 217 -----------YGKIMNHKEHFQFPP----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -----------HHHHHcCCCcccCCC----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 111111100000111 0112445677788877654 33448899999987
No 223
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7e-34 Score=305.97 Aligned_cols=254 Identities=24% Similarity=0.422 Sum_probs=202.4
Q ss_pred hCCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.++|...+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.. ...+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 35788899999999999999998778889999886432 235678999999999999999999999887 778999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 82 MAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred CCCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 99999999987543 345889999999999999999999986 9999999999999999999999999997654221
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
.. ......++..|+|||++.+..++.++||||||+++|++++ |+.||.... .......+.
T Consensus 157 ~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~----- 217 (260)
T cd05073 157 YT------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALE----- 217 (260)
T ss_pred cc------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHh-----
Confidence 10 1111245678999999998889999999999999999999 899985321 111111111
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
..... + .....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 218 -----------~~~~~--~-----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 218 -----------RGYRM--P-----RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -----------CCCCC--C-----CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11100 0 012245678999999999999999999999999875
No 224
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.2e-34 Score=310.83 Aligned_cols=260 Identities=24% Similarity=0.387 Sum_probs=205.0
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
|...+.||+|+||.||+|.+. +++.||+|.++........+.+.+|++++++++||||+++++++......++|+||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 444677999999999999864 5778999998765544456789999999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+++|.+++.. ..+++..+..++.|+++|+.|||+.+ ++|+||+|+||++++++.++++|||++........
T Consensus 86 ~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06642 86 GGSALDLLKP-----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcch-
Confidence 9999988853 45889999999999999999999986 99999999999999999999999999876543211
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
......|+..|+|||++.+..++.++||||||+++|||++|+.||...... .....
T Consensus 157 ------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~---------- 212 (277)
T cd06642 157 ------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--RVLFL---------- 212 (277)
T ss_pred ------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--hHHhh----------
Confidence 111235888999999999988999999999999999999999998632111 00000
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhcCCCchh
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYLSSPSSL 975 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~ 975 (983)
+..... +. . ....+.++.+++.+|++.+|++||++.|++++-. +.+....++.+
T Consensus 213 ------~~~~~~---~~-~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~-~~~~~~~~~~~ 266 (277)
T cd06642 213 ------IPKNSP---PT-L---EGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF-ITRYTKKTSFL 266 (277)
T ss_pred ------hhcCCC---CC-C---CcccCHHHHHHHHHHccCCcccCcCHHHHHHhHH-HHHHhhhHHHH
Confidence 000000 00 0 0124567889999999999999999999998643 34444444444
No 225
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.3e-34 Score=323.14 Aligned_cols=272 Identities=21% Similarity=0.216 Sum_probs=197.8
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecC------
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKP------ 736 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 736 (983)
..++|...+.||+|+||.||+|... .++.||||.+..... .....++.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999854 688899999865432 23456788999999999999999999988543
Q ss_pred CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 737 DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 737 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
...++||||+++ ++.+.+. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCc
Confidence 246899999975 5555553 24788999999999999999999996 9999999999999999999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~ 896 (983)
+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..
T Consensus 165 ~~~~~~~~~--------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~ 229 (355)
T cd07874 165 LARTAGTSF--------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNK 229 (355)
T ss_pred ccccCCCcc--------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHH
Confidence 997543211 11224689999999999999999999999999999999999999863210 011111
Q ss_pred HHHhhCCC------CCcHHHHHHHhhcCCC---CCcc--------ccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 042568 897 WVKRHYPH------RLDPIVEKAIAKYAPQ---HMPI--------YYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVA 959 (983)
Q Consensus 897 ~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 959 (983)
.+...... ...+............ ..+. ...........++.+++.+|++.||++|||+.|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell 309 (355)
T cd07874 230 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEAL 309 (355)
T ss_pred HHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHh
Confidence 11111000 0011111111100000 0000 00001112346789999999999999999999999
Q ss_pred HH
Q 042568 960 HE 961 (983)
Q Consensus 960 ~~ 961 (983)
++
T Consensus 310 ~h 311 (355)
T cd07874 310 QH 311 (355)
T ss_pred cC
Confidence 87
No 226
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1e-33 Score=303.06 Aligned_cols=249 Identities=31% Similarity=0.483 Sum_probs=198.9
Q ss_pred CccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcccc
Q 042568 673 SLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSLE 752 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 752 (983)
++||+|+||.||+|...+++.||+|.+......+....+.+|++++++++|+||+++++++......++|+||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999977799999999876554445678999999999999999999999999999999999999999999
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccC
Q 042568 753 NHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCAN 832 (983)
Q Consensus 753 ~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 832 (983)
+++... ...+++..+..++.+++.|++|||+++ ++||||||+||+++.++.++|+|||.+.........
T Consensus 81 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~----- 149 (251)
T cd05041 81 TFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT----- 149 (251)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcce-----
Confidence 988643 235789999999999999999999996 999999999999999999999999999765421100
Q ss_pred CCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 833 DSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
.......++..|+|||.+.+..++.++||||||+++|||++ |..||..... .....
T Consensus 150 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--~~~~~--------------- 206 (251)
T cd05041 150 ------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--QQTRE--------------- 206 (251)
T ss_pred ------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--HHHHH---------------
Confidence 11111234667999999988889999999999999999999 8888753211 00111
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.+........ ....+.++.+++.+|+..+|++||++.|+++.|.
T Consensus 207 -~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 207 -RIESGYRMPA-------PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -HHhcCCCCCC-------CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 1111000000 1234568999999999999999999999999875
No 227
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.9e-34 Score=307.06 Aligned_cols=257 Identities=24% Similarity=0.384 Sum_probs=201.2
Q ss_pred CCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccC-----cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTT-----GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
+|...+.||+|+||.||+|...+++.+|||.++.... .+...++.+|++++++++|+||+++++++...+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999988899999998865432 12345688999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
+||+++++|.+++... ..+++..+..++.|++.|++|||+.+ |+|+||||+||++++++.++|+|||.+....
T Consensus 81 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNRF----GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 9999999999998642 35789999999999999999999986 9999999999999999999999999998653
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
....... .........|+..|+|||+..+..++.++||||+|+++|+|++|+.||.... .......
T Consensus 154 ~~~~~~~-------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~~~--- 219 (265)
T cd06631 154 WVGLHGT-------HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD----RLAAMFY--- 219 (265)
T ss_pred hcccccc-------ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC----hHHHHHH---
Confidence 2211100 0011123468999999999999889999999999999999999999986321 0000000
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+.. .....+.. ......++.+++.+|++.+|++||++.|++++
T Consensus 220 -----------~~~-~~~~~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 220 -----------IGA-HRGLMPRL----PDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred -----------hhh-ccCCCCCC----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 00000000 11245678899999999999999999999863
No 228
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1e-33 Score=306.13 Aligned_cols=255 Identities=23% Similarity=0.341 Sum_probs=187.1
Q ss_pred ccccCCcEeEEEEEECCCc---EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcc
Q 042568 674 LIGSGRFGHVYKGVLQDNT---RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGS 750 (983)
Q Consensus 674 ~iG~G~~g~Vy~~~~~~~~---~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 750 (983)
.||+|+||.||+|...++. .+++|.+.........+.+.+|+.+++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5999999999999854433 4567776554444456789999999999999999999999999999999999999999
Q ss_pred cccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccc
Q 042568 751 LENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNC 830 (983)
Q Consensus 751 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~ 830 (983)
|.+++..........++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 99998764333345677888999999999999999985 99999999999999999999999999864321100
Q ss_pred cCCCCccccccCccccccccccccccCC-------CCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhC
Q 042568 831 ANDSMSFTSTDGLLCGSVGYIAPEYGMG-------KRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
........|+..|+|||+... ..++.++||||||+++|||++ |..||.... ..+.
T Consensus 155 -------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~~~~----- 217 (268)
T cd05086 155 -------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS-----DREV----- 217 (268)
T ss_pred -------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-----HHHH-----
Confidence 011123468899999998753 245789999999999999997 466764311 1111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+...+............. ......+.+++..|| .+|++||+++||++.|.
T Consensus 218 -------~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 218 -------LNHVIKDQQVKLFKPQLE---LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -------HHHHHhhcccccCCCccC---CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111111100000000000 113356777888899 67999999999998773
No 229
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-33 Score=306.37 Aligned_cols=258 Identities=24% Similarity=0.399 Sum_probs=203.2
Q ss_pred CCCCCCCccccCCcEeEEEEEECC----CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD----NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
++|...+.||+|+||.||+|...+ ...||||........+..+.+.+|++++++++||||+++++++.. ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 357778999999999999998643 246899988665544556789999999999999999999999875 456899
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++|+|.+++... ...+++..++.++.|++.|++|||+.+ ++||||||+||+++.++.++++|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 85 MELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999998653 235899999999999999999999986 9999999999999999999999999998654
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~ 901 (983)
..... ......++..|+|||.+....++.++||||||+++||+++ |+.||..... .....
T Consensus 159 ~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~----- 219 (270)
T cd05056 159 DESYY------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIG----- 219 (270)
T ss_pred cccce------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHH-----
Confidence 32111 0011234568999999988889999999999999999996 9999864211 00001
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
. +..... .+ ....++.++.+++.+|+..+|++|||+.++++.|+++.+.
T Consensus 220 ----------~-~~~~~~--~~-----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 220 ----------R-IENGER--LP-----MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ----------H-HHcCCc--CC-----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 000000 00 0123456899999999999999999999999999998754
No 230
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5e-34 Score=306.40 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=202.0
Q ss_pred CCCCCCCccccCCcEeEEEEEECC-CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD-NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|+..+.||+|+||.||+|...+ ++.||+|.+..... .+++.+|++++++++||||+++++++......++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 578889999999999999999764 78899999865432 57899999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++... ...+++..++.++.|+++|+.|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 80 CGAGSVSDIMKIT---NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred CCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 9999999988643 356899999999999999999999986 9999999999999999999999999988664321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......|+..|+|||+..+..++.++||||||+++|+|++|+.||....... ....
T Consensus 154 ~-------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~----~~~~------ 210 (256)
T cd06612 154 A-------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR----AIFM------ 210 (256)
T ss_pred c-------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh----hhhh------
Confidence 1 1122458889999999999899999999999999999999999986421110 0000
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+..... +.. ........++.+++.+|++.+|++|||++|++++
T Consensus 211 --------~~~~~~---~~~--~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 211 --------IPNKPP---PTL--SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred --------hccCCC---CCC--CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 000000 000 0011244678999999999999999999999864
No 231
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.8e-33 Score=303.20 Aligned_cols=254 Identities=30% Similarity=0.422 Sum_probs=192.5
Q ss_pred CccccCCcEeEEEEEEC----CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEe-cCCceeEEEeccc
Q 042568 673 SLIGSGRFGHVYKGVLQ----DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICS-KPDFKALVLPLMS 747 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 747 (983)
+.||+|+||.||+|.+. ++..||+|.+.........+.+.+|+.+++.++|||++++++++. .....++|+||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 235699998854433344678889999999999999999999775 4556789999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+|+|.+++... ....++..+..++.|+++|++|||+.+ ++||||||+||++++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999998643 234677888999999999999999985 999999999999999999999999999755421110
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCC-CCCcccCCCCchHHHHHhhCCCCC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRR-PTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~-p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
. ........++..|+|||+..+..++.++||||||+++|||++|+. ||... ...+..
T Consensus 155 ~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-----~~~~~~-------- 212 (262)
T cd05058 155 S---------VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----DSFDIT-------- 212 (262)
T ss_pred e---------ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHH--------
Confidence 0 011112346778999999988889999999999999999999654 44321 111111
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
.. +........+ ...+..+.+++.+||+.+|++||++.|++++++++.
T Consensus 213 ----~~-~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 213 ----VY-LLQGRRLLQP-------EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ----HH-HhcCCCCCCC-------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 11 1110000001 113467889999999999999999999999998874
No 232
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.2e-34 Score=305.88 Aligned_cols=254 Identities=23% Similarity=0.345 Sum_probs=202.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|...+.||+|+||.||+|... +++.+|+|.+...... ..+.+.+|++++++++||||+++++++...+..+++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 57888899999999999999964 5788999999765433 467899999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++... ...+++..+..++.|++.|++|||+.+ ++|+||||+||++++++.++|+|||.+.......
T Consensus 82 ~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 82 CGGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred CCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 9999999988653 246899999999999999999999986 9999999999999999999999999987654211
Q ss_pred ccccccCCCCccccccCccccccccccccccCCC---CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK---RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
. ......++..|+|||...+. .++.++||||||+++|||++|+.||...... ...
T Consensus 156 ~-------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~----~~~----- 213 (262)
T cd06613 156 A-------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM----RAL----- 213 (262)
T ss_pred h-------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHH-----
Confidence 1 11224688899999998876 7889999999999999999999998642110 000
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
............ .......+.++.+++.+|+..+|.+||++++++.+
T Consensus 214 -------~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 214 -------FLISKSNFPPPK-----LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred -------HHHHhccCCCcc-----ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000 00112345678999999999999999999999864
No 233
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4e-34 Score=311.97 Aligned_cols=252 Identities=26% Similarity=0.346 Sum_probs=198.6
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
|+..++||+|+||.||+|... +++.||||.+...... .....+.+|+.++++++|++++++++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999965 6889999998654322 2235677899999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 82 MNGGDLKFHIYHMG--EAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred cCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 99999998885432 345899999999999999999999986 9999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. .....||..|+|||++.+..++.++||||+|+++|+|++|+.||....... . ..
T Consensus 157 ~--------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~-~~--------- 211 (285)
T cd05630 157 T--------------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-K-RE--------- 211 (285)
T ss_pred c--------------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-h-HH---------
Confidence 1 112368999999999999899999999999999999999999986421110 0 00
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS-----MLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 961 (983)
........... .. ......++.+++.+|++.||++||| ++|++++
T Consensus 212 ---~~~~~~~~~~~-~~-------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 212 ---EVERLVKEVQE-EY-------SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred ---HHHhhhhhhhh-hc-------CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 00000000000 00 0123456889999999999999999 8899875
No 234
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-34 Score=309.67 Aligned_cols=254 Identities=24% Similarity=0.341 Sum_probs=194.5
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecc-cCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLT-TTGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 744 (983)
..|++.++||+||.+.||++...+.+.||+|++... .+......|..|++.|.+++ |.+||++++|-..++..|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 347778999999999999999888888888876433 34446788999999999994 9999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|-+ .+|..++.... ....+| .++.++.|++.|+.++|++| |||.|+||.|+|+-+ |.+||+|||+|..+..+
T Consensus 441 ~Gd-~DL~kiL~k~~--~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKK--SIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPD 512 (677)
T ss_pred ccc-ccHHHHHHhcc--CCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCcc
Confidence 975 48989887653 222334 78889999999999999997 999999999999874 68999999999987654
Q ss_pred cccccccCCCCccccccCccccccccccccccCCC-----------CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCc
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-----------RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSS 893 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~ 893 (983)
... ......+||+-||+||.+... ++++++||||+|||+|+|+.|+.||....
T Consensus 513 TTs-----------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~----- 576 (677)
T KOG0596|consen 513 TTS-----------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII----- 576 (677)
T ss_pred ccc-----------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----
Confidence 433 223445899999999987542 25789999999999999999999986321
Q ss_pred hHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 894 LHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 894 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.. +.+. ..+.+..-+..+.... ...++++++..|+++||.+||++.|++++
T Consensus 577 --n~------------~aKl-~aI~~P~~~Iefp~~~--~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 577 --NQ------------IAKL-HAITDPNHEIEFPDIP--ENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred --HH------------HHHH-HhhcCCCccccccCCC--CchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 00 1111 0111110000000000 11238999999999999999999999964
No 235
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5e-34 Score=311.70 Aligned_cols=274 Identities=21% Similarity=0.258 Sum_probs=198.9
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|...+.||+|++|.||+|... +++.||||.+...... .....+.+|++++++++|||++++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4677889999999999999965 6889999998654322 2346788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
++ +++.+++..... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 588877754332 356899999999999999999999986 9999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. ......+++.|+|||.+.+. .++.++||||||+++|+|++|+.||...... .............
T Consensus 156 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~ 221 (285)
T cd07861 156 R-------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI-DQLFRIFRILGTP 221 (285)
T ss_pred c-------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence 0 11123578899999987654 5788999999999999999999998642110 0011111100000
Q ss_pred --CCc---HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 --RLD---PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 --~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
... ..... .....+................++.+++.+|+..||++|||+.+++++
T Consensus 222 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 222 TEDVWPGVTSLPD-YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred ChhhhhcchhhHH-HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000 00000 000000000000011112245678899999999999999999999864
No 236
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.2e-34 Score=324.42 Aligned_cols=273 Identities=23% Similarity=0.257 Sum_probs=201.2
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC---CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ---DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
..+|.+.+.||+|+||.||++... .+..||||.+... ..+.+|++++++++||||+++++++......++|
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 357999999999999999999753 3567999987432 3456899999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
||++. +++.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||+++...
T Consensus 165 ~e~~~-~~l~~~l~~----~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 165 MPKYK-CDLFTYVDR----SGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred ehhcC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 99996 577777732 356899999999999999999999996 9999999999999999999999999997654
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCC--CchHHHHHh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDG--SSLHEWVKR 900 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~--~~l~~~~~~ 900 (983)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+...+..
T Consensus 237 ~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~ 305 (392)
T PHA03207 237 AHPDT-----------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRC 305 (392)
T ss_pred ccccc-----------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHH
Confidence 32211 11123579999999999999999999999999999999999999986432211 112222221
Q ss_pred h------CCCCCcHHHHHHHhhcCCCCCcccc-ccc--hHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 901 H------YPHRLDPIVEKAIAKYAPQHMPIYY-NKV--WSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 901 ~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
. ++......+.+..........+... ... ......++.+++.+|+..||++||++.|++.+=.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 306 MQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred hccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 1 1111111111111111111011000 000 0123457889999999999999999999998743
No 237
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.6e-33 Score=302.51 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=199.6
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
..|+..+.||+|+||.||+|.+.+++.+|+|.+..... ...++.+|++++++++|||++++++++......++|+||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM--SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC--CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 35677889999999999999987788999998864332 2467899999999999999999999999989999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++... ...+++..++.++.|++.|++|||+.+ ++||||||+||+++.++.++|+|||.++.......
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 82 EHGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred CCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 999999988643 235789999999999999999999986 99999999999999999999999999876532211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.......++.+|+|||+..+..++.++||||+|+++|||++ |+.||.... ...+
T Consensus 156 ------------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~-------- 210 (256)
T cd05112 156 ------------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-----NSEV-------- 210 (256)
T ss_pred ------------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHH--------
Confidence 00111235678999999998889999999999999999998 999985321 1111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.+.. ........+. ..+.++.+++.+|++.+|++||+++|++++|
T Consensus 211 ----~~~~-~~~~~~~~~~-------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 211 ----VETI-NAGFRLYKPR-------LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ----HHHH-hCCCCCCCCC-------CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1111 1100000010 1246789999999999999999999999886
No 238
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-36 Score=346.55 Aligned_cols=257 Identities=26% Similarity=0.377 Sum_probs=207.1
Q ss_pred HhCCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
.+-+|.....||.|.||.||-|. .++|+-.|||-++.... ....+...+|+.++..++|||+|+++|+-...+..+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 44577888999999999999999 56788899998865533 33567788999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
||||++|+|++.+... ...++.....+..|++.|++|||++| ||||||||.||+++.+|.+|.+|||.|..+.
T Consensus 1313 MEyC~~GsLa~ll~~g----ri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHG----RIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHhccCcHHHHHHhc----chhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEec
Confidence 9999999999998743 33667777889999999999999997 9999999999999999999999999998876
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCC---CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK---RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
...+.+ ....+..+||+.|||||.+.+. ....++||||+|||+.||+||+.||....+.-.-+.....
T Consensus 1386 ~~~~~~---------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~ 1456 (1509)
T KOG4645|consen 1386 NNAQTM---------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA 1456 (1509)
T ss_pred CchhcC---------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc
Confidence 542221 1333456899999999999874 3467899999999999999999999765333221111111
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+ .|+ ..+....+-.+++.+|+..||++|+++.|++++
T Consensus 1457 gh--------------------~Pq----~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1457 GH--------------------KPQ----IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred cC--------------------CCC----CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 11 111 112366788999999999999999999988765
No 239
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-33 Score=309.48 Aligned_cols=256 Identities=20% Similarity=0.293 Sum_probs=201.2
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
+|+..+.||+|+||.||+|... +++.||+|.+...........+.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5777899999999999999976 788999999876544444578999999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|..++..... ...+++..+..++.|+++|+.|||+.. +|+||||||+||+++.++.++|+|||.+..+....
T Consensus 82 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 82 DAGSLDKLYAGGVA-TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred CCCCHHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 99999888764321 346899999999999999999999742 49999999999999999999999999987553211
Q ss_pred cccccCCCCccccccCccccccccccccccCCC------CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK------RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
.....|+..|+|||.+.+. .++.++||||+||++|+|++|+.||..... .....
T Consensus 158 --------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~---- 217 (286)
T cd06622 158 --------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY--ANIFA---- 217 (286)
T ss_pred --------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch--hhHHH----
Confidence 1223588899999998654 347899999999999999999999853210 00000
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.+...... .... ...+...++.+++.+|++.+|++||++++++++-.
T Consensus 218 --------~~~~~~~~-~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 218 --------QLSAIVDG-DPPT-------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred --------HHHHHhhc-CCCC-------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 01111111 1111 11235677889999999999999999999998643
No 240
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.3e-34 Score=321.93 Aligned_cols=273 Identities=21% Similarity=0.195 Sum_probs=197.8
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecC------
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKP------ 736 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 736 (983)
..++|...+.||+|+||.||+|... .++.||||++..... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999964 678899999865432 23456788999999999999999999987543
Q ss_pred CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 737 DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 737 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
...++||||+++ ++.+.+. ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCC
Confidence 346999999975 6666553 24788899999999999999999996 9999999999999999999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~ 896 (983)
+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..
T Consensus 172 ~a~~~~~~~--------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~ 236 (364)
T cd07875 172 LARTAGTSF--------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNK 236 (364)
T ss_pred CccccCCCC--------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-HHHHHH
Confidence 997653211 11224689999999999999999999999999999999999999864211 111111
Q ss_pred HHHhhCCCC------CcHHHHHHHhhcCCC-----------CCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 042568 897 WVKRHYPHR------LDPIVEKAIAKYAPQ-----------HMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVA 959 (983)
Q Consensus 897 ~~~~~~~~~------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 959 (983)
.+...-... +...+.......... ...............++.+++.+|++.||++|||+.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L 316 (364)
T cd07875 237 VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316 (364)
T ss_pred HHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 111100000 000111111000000 000000001111245788999999999999999999999
Q ss_pred HHH
Q 042568 960 HEM 962 (983)
Q Consensus 960 ~~L 962 (983)
++=
T Consensus 317 ~hp 319 (364)
T cd07875 317 QHP 319 (364)
T ss_pred cCc
Confidence 873
No 241
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.6e-34 Score=333.07 Aligned_cols=274 Identities=19% Similarity=0.226 Sum_probs=192.6
Q ss_pred HHHHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCC------CccceeeEEe
Q 042568 662 LIEATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHR------NLIRIITICS 734 (983)
Q Consensus 662 l~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~ 734 (983)
+...+++|.+.++||+|+||+||+|... +++.||||+++... .....+..|+++++.++|. +++++++++.
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3345678999999999999999999964 57889999985432 2235567788888887654 5888888886
Q ss_pred cC-CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC-----
Q 042568 735 KP-DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL----- 808 (983)
Q Consensus 735 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~----- 808 (983)
.. ...++|||++ +++|.+++.. ...+++..+..|+.||+.||+|||++. +||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCccccc
Confidence 54 4678999988 6688887764 245899999999999999999999741 399999999999998765
Q ss_pred -----------CEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHH
Q 042568 809 -----------TALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEI 877 (983)
Q Consensus 809 -----------~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~el 877 (983)
.+||+|||.+..... .....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~----------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~el 338 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERH----------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL 338 (467)
T ss_pred ccccccCCCCceEEECCCCccccCcc----------------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHH
Confidence 499999998753221 11235799999999999999999999999999999999
Q ss_pred HhCCCCCCcccCCCCchHHHHHhhC---CCCCc-----HHHHHHHhhcCCCCCccccc---------cchH--HHHHHHH
Q 042568 878 VTGRRPTDVLFHDGSSLHEWVKRHY---PHRLD-----PIVEKAIAKYAPQHMPIYYN---------KVWS--DVVLELI 938 (983)
Q Consensus 878 ltg~~p~~~~~~~~~~l~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~---------~~~~--~~~~~l~ 938 (983)
++|+.||+.... ......+.... +..+. +........... ..+.... ..+. .....+.
T Consensus 339 ltG~~pf~~~~~--~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (467)
T PTZ00284 339 YTGKLLYDTHDN--LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ-LRPCTDPKHLARIARARPVREVIRDDLLC 415 (467)
T ss_pred HhCCCCCCCCCh--HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc-ccccCCHHHHHhhhcccchhhhhchHHHH
Confidence 999999964211 11111111110 10000 000000000000 0000000 0000 1134578
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 939 ELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 939 ~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+|+.+|+++||++|||++|+++|=.
T Consensus 416 dli~~mL~~dP~~R~ta~e~L~Hp~ 440 (467)
T PTZ00284 416 DLIYGLLHYDRQKRLNARQMTTHPY 440 (467)
T ss_pred HHHHHhCCcChhhCCCHHHHhcCcc
Confidence 9999999999999999999998643
No 242
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.9e-34 Score=321.21 Aligned_cols=256 Identities=21% Similarity=0.240 Sum_probs=197.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|.+.+.||+|+||.||+++.. +++.||+|.+.... .......+.+|..++..++|++|+++++++...+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999965 57889999986532 1223456888999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999998753 245889999999999999999999986 99999999999999999999999999976543
Q ss_pred CcccccccCCCCccccccCccccccccccccccCC-----CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-----KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+
T Consensus 155 ~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----~~~-- 215 (331)
T cd05624 155 DGT------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES-----LVE-- 215 (331)
T ss_pred CCc------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC-----HHH--
Confidence 211 11122469999999998875 467889999999999999999999985321 111
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCC--CCCHHHHHHH
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPST--RPSMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 961 (983)
..............+ ....+.+.++.+++.+|+...+.+ |+++++++++
T Consensus 216 ----------~~~~i~~~~~~~~~p----~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 216 ----------TYGKIMNHEERFQFP----SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ----------HHHHHHcCCCcccCC----CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 111111110000011 112234567888999988865544 5689999876
No 243
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.1e-34 Score=307.64 Aligned_cols=239 Identities=24% Similarity=0.373 Sum_probs=184.8
Q ss_pred ccccCCcEeEEEEEECC-------------------------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccc
Q 042568 674 LIGSGRFGHVYKGVLQD-------------------------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIR 728 (983)
Q Consensus 674 ~iG~G~~g~Vy~~~~~~-------------------------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 728 (983)
.||+|+||.||+|.+.. ...||+|+++.... +....+.+|++++++++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence 69999999999997421 13488998854432 23567888999999999999999
Q ss_pred eeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC
Q 042568 729 IITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL 808 (983)
Q Consensus 729 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~ 808 (983)
+++++......++||||+++|+|..++... ...+++..+..++.|+++||+|||+.+ |+||||||+||++++.+
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKE---KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccC
Confidence 999999999999999999999999888643 345889999999999999999999986 99999999999997643
Q ss_pred -------CEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHH-h
Q 042568 809 -------TALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIV-T 879 (983)
Q Consensus 809 -------~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~ell-t 879 (983)
.++++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~-----------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~ 217 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR-----------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD 217 (274)
T ss_pred cccCccceeeecCCccccccccc-----------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 3799999987643211 11257788999998875 56899999999999999995 6
Q ss_pred CCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 042568 880 GRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVA 959 (983)
Q Consensus 880 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 959 (983)
|+.||...... .... ...... ..+. ....++.+++.+||+.+|++||++++++
T Consensus 218 g~~p~~~~~~~--~~~~----------------~~~~~~--~~~~-------~~~~~~~~li~~cl~~~p~~Rps~~~il 270 (274)
T cd05076 218 GEVPLKERTPS--EKER----------------FYEKKH--RLPE-------PSCKELATLISQCLTYEPTQRPSFRTIL 270 (274)
T ss_pred CCCCccccChH--HHHH----------------HHHhcc--CCCC-------CCChHHHHHHHHHcccChhhCcCHHHHH
Confidence 89887532110 0000 000000 0110 1224688999999999999999999999
Q ss_pred HHHH
Q 042568 960 HEMG 963 (983)
Q Consensus 960 ~~L~ 963 (983)
++|+
T Consensus 271 ~~L~ 274 (274)
T cd05076 271 RDLT 274 (274)
T ss_pred HhhC
Confidence 8873
No 244
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.7e-34 Score=307.67 Aligned_cols=258 Identities=22% Similarity=0.353 Sum_probs=198.1
Q ss_pred HHHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 663 IEATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 663 ~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
..+++.+.....||+|+||.||+|... ++..||+|.+...... ..+.+.+|++++++++|+||+++++++...+..++
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR-YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH-HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 345666767789999999999999954 5778999988654332 45678999999999999999999999999999999
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC-CCCEEEcccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE-DLTALVADFGIAKL 820 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~-~~~~kl~Dfgla~~ 820 (983)
|+||+++++|.+++..... ....++..+..++.|+++|++|||+.+ |+||||||+||+++. ++.++|+|||.+..
T Consensus 83 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999874321 112278888999999999999999986 999999999999986 67999999999876
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCCC--CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK--RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
...... ......|+..|+|||+..+. .++.++||||||+++|+|++|+.||........ ..
T Consensus 159 ~~~~~~-------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~-- 221 (268)
T cd06624 159 LAGINP-------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AM-- 221 (268)
T ss_pred cccCCC-------------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hH--
Confidence 532111 11123578999999998664 378899999999999999999999864211100 00
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
......... ... ......++.+++.+|++.+|++|||+.|++++
T Consensus 222 -----------~~~~~~~~~-~~~-------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 222 -----------FKVGMFKIH-PEI-------PESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred -----------hhhhhhccC-CCC-------CcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 000000000 001 12245678899999999999999999999875
No 245
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.9e-34 Score=312.73 Aligned_cols=265 Identities=22% Similarity=0.335 Sum_probs=202.5
Q ss_pred CCHHHHHHHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEe
Q 042568 657 VSYKQLIEATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICS 734 (983)
Q Consensus 657 ~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 734 (983)
+.++.+..+.++|++.+.||+|+||.||+|... +++.+|+|.++... .....+.+|+.+++++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 344556667889999999999999999999964 57889999875432 2246788899999999 6999999999873
Q ss_pred -----cCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCC
Q 042568 735 -----KPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLT 809 (983)
Q Consensus 735 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~ 809 (983)
..+..++||||+++++|.+++.........+++..+..++.|+++|+.|||+.+ ++||||||+||+++.++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCC
Confidence 345679999999999999887643333456889999999999999999999986 999999999999999999
Q ss_pred EEEccccccccccCCcccccccCCCCccccccCccccccccccccccCC-----CCCCccchhHHHHHHHHHHHhCCCCC
Q 042568 810 ALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-----KRASTHGDVYSFGVLLLEIVTGRRPT 884 (983)
Q Consensus 810 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~SlG~il~elltg~~p~ 884 (983)
++|+|||+++....... ......|+..|+|||++.. ..++.++||||+||++|||++|+.||
T Consensus 163 ~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~ 229 (286)
T cd06638 163 VKLVDFGVSAQLTSTRL-------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL 229 (286)
T ss_pred EEEccCCceeecccCCC-------------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCC
Confidence 99999999876542211 1122468999999998753 45788999999999999999999998
Q ss_pred CcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 885 DVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 885 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
..... ...+.. ......... ... .....++.+++.+|++.+|++|||+.|++++.
T Consensus 230 ~~~~~----~~~~~~--------------~~~~~~~~~--~~~---~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 230 ADLHP----MRALFK--------------IPRNPPPTL--HQP---ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CCCch----hHHHhh--------------ccccCCCcc--cCC---CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 64211 011000 000000000 000 11235688999999999999999999999864
No 246
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.5e-34 Score=320.59 Aligned_cols=256 Identities=22% Similarity=0.231 Sum_probs=195.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|...++||+|+||.||+++.+ +++.||+|++.... .......+.+|+.++..++|++|+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888999999999999999965 56789999985432 1223455888999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 999999999998743 245899999999999999999999986 99999999999999999999999999875432
Q ss_pred CcccccccCCCCccccccCccccccccccccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-----GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
... .......||+.|+|||++. ...++.++|||||||++|||++|+.||... ...+..
T Consensus 155 ~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~-----~~~~~~ 217 (332)
T cd05623 155 DGT------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETY 217 (332)
T ss_pred CCc------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC-----CHHHHH
Confidence 111 1112346999999999986 346789999999999999999999998632 111111
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCC--CCCCHHHHHHH
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPS--TRPSMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~--~RPs~~evl~~ 961 (983)
............+ .....+..++.+++.+|+..++. .|++++|++++
T Consensus 218 ------------~~i~~~~~~~~~p----~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 218 ------------GKIMNHKERFQFP----AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ------------HHHhCCCccccCC----CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 1111110000011 11123456788888888865444 47899999987
No 247
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=8.7e-34 Score=310.76 Aligned_cols=277 Identities=22% Similarity=0.301 Sum_probs=198.9
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++++|...+.||+|+||.||+|... +++.||+|++...........+.+|+++++.++|+||+++++++...+..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999854 688999999876544444457789999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+. +++.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 5776665432 235788889999999999999999996 99999999999999999999999999875432
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh-
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH- 901 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~- 901 (983)
... ......++..|+|||++.+. .++.++||||||+++|||++|+.||+........+.+.+...
T Consensus 156 ~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~ 222 (291)
T cd07870 156 PSQ-------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLG 222 (291)
T ss_pred CCC-------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcC
Confidence 111 11123578999999998764 578899999999999999999999864322111111111100
Q ss_pred CCCC-CcHHHH---HHHhhcCCCCCccccccchH--HHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 902 YPHR-LDPIVE---KAIAKYAPQHMPIYYNKVWS--DVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 902 ~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+.. ...... ...........+......+. ....++.+++.+|++.||++|||++|++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 223 VPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred CCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0100 000000 00000000000000000000 124578899999999999999999999864
No 248
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.4e-34 Score=311.54 Aligned_cols=250 Identities=20% Similarity=0.330 Sum_probs=200.9
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.+|+..+.||.|+||.||+|.. .+++.||+|.+...... ..+.+.+|+++++.++|||++++++++...+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP-KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc-hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 3588889999999999999985 46889999998654433 356788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.. ..+++..+..++.|+++|++|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 98 LAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred cCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 999999998853 35899999999999999999999996 9999999999999999999999999987654321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||..... ......
T Consensus 170 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~----~~~~~~------ 226 (296)
T cd06655 170 S-------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRALYL------ 226 (296)
T ss_pred c-------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHH------
Confidence 1 11123588999999999988899999999999999999999999864211 110000
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+......... ........+.+++.+||..+|++||++.+++++
T Consensus 227 --------~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 227 --------IATNGTPELQ-----NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred --------HHhcCCcccC-----CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000000 012245678899999999999999999999865
No 249
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.2e-34 Score=309.76 Aligned_cols=263 Identities=24% Similarity=0.292 Sum_probs=202.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecC--CceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKP--DFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 743 (983)
++|...+.||.|++|.||+|... +++.+|+|.+..........++.+|++++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46778899999999999999974 57889999987655444567899999999999999999999988543 4679999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++.........+++..+..++.|+++||+|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999998877543333456889999999999999999999986 99999999999999999999999999875432
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. .....++..|+|||...+..++.++||||+|+++|+|++|+.||+..........+....
T Consensus 158 ~~---------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--- 219 (287)
T cd06621 158 SL---------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY--- 219 (287)
T ss_pred cc---------------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHH---
Confidence 11 112357889999999999899999999999999999999999987532111111111111
Q ss_pred CCCcHHHHHHHhhcCCCCCc--cccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMP--IYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+........+ .... ......+.+++.+|++.+|++|||+.|++++-.
T Consensus 220 ----------~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 220 ----------IVNMPNPELKDEPGNG---IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred ----------HhcCCchhhccCCCCC---CchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 0000000000 0000 113467899999999999999999999998554
No 250
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.3e-33 Score=306.95 Aligned_cols=250 Identities=22% Similarity=0.362 Sum_probs=203.1
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
.|+..+.||+|+||.||+|... +++.||+|.++..........+.+|++++++++||||+++++++......++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4666788999999999999965 578899999876554445678999999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.. .++++..+..++.|+++|++|+|+.+ ++|+||+|+||+++.++.++++|||++........
T Consensus 85 ~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 85 GGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 99999998863 35788999999999999999999985 99999999999999999999999999976543211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
......++..|+|||+..+..++.++||||||+++|||++|+.||...... ..
T Consensus 157 -------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~--------- 209 (277)
T cd06640 157 -------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RV--------- 209 (277)
T ss_pred -------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hH---------
Confidence 111235788999999999888999999999999999999999998642110 00
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
... +.... .+ ......+..+.+++.+|++.+|++||++++++++-.
T Consensus 210 ---~~~-~~~~~---~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 210 ---LFL-IPKNN---PP----TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred ---hhh-hhcCC---CC----CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 000 00000 01 112346678999999999999999999999988743
No 251
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.1e-33 Score=303.79 Aligned_cols=252 Identities=22% Similarity=0.307 Sum_probs=203.3
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|+..+.||+|+||.||.++. .+++.+|+|.+.... ......++.+|++++++++|+||+++++++...+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 578889999999999999984 468889999986543 233456788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.... ...+++..+..++.|+++|++|||+.+ ++||||||+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999887543 346899999999999999999999986 9999999999999999999999999998664322
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......|++.|+|||+..+..++.++||||||+++|||++|+.||+.. ...+.
T Consensus 156 ~-------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~-------- 209 (256)
T cd08221 156 S-------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT-----NPLNL-------- 209 (256)
T ss_pred c-------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC-----CHHHH--------
Confidence 1 112246899999999999888899999999999999999999998531 11111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
......... +.. ....+.++.+++.+|+..+|++||+++|++++.
T Consensus 210 ----~~~~~~~~~----~~~----~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 210 ----VVKIVQGNY----TPV----VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ----HHHHHcCCC----CCC----ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 111111100 000 022456788999999999999999999998763
No 252
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.3e-33 Score=305.19 Aligned_cols=262 Identities=25% Similarity=0.386 Sum_probs=206.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|+..+.||.|+||.||+|... ++..+|+|++...........+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999954 67889999987655444567899999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++..... ...+++..+..++.|++.|++|||+.+ ++||||||+||++++++.++|+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999865322 246899999999999999999999986 9999999999999999999999999998765432
Q ss_pred ccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
... ........|+..|+|||++... .++.++||||||+++|+|++|+.||...... ...
T Consensus 157 ~~~---------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~---------- 216 (267)
T cd06610 157 DRT---------RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVL---------- 216 (267)
T ss_pred ccc---------ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhH----------
Confidence 210 0112334689999999998776 7899999999999999999999998643111 001
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+...... ...+ ....+...+.++.+++.+|++.||++||+++|++++
T Consensus 217 ------~~~~~~~~-~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 217 ------MLTLQNDP-PSLE--TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred ------HHHhcCCC-CCcC--CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11111100 0000 000122456788999999999999999999999875
No 253
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8e-34 Score=319.42 Aligned_cols=270 Identities=20% Similarity=0.265 Sum_probs=195.0
Q ss_pred HHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 664 EATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 664 ~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
....+|.+.+.||+|+||.||+|... +++.||+|.... .....|+.++++++||||+++++++......++|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc-------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 34568999999999999999999965 567899997532 2335699999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
+||+. ++|.+++... ...+++..++.|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 136 ~e~~~-~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 136 LPHYS-SDLYTYLTKR---SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEccC-CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 99996 5787777543 346899999999999999999999996 9999999999999999999999999987532
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCC-CcccCCCC--------c
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPT-DVLFHDGS--------S 893 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~-~~~~~~~~--------~ 893 (983)
... ......||+.|+|||++.+..++.++|||||||++|||+++..|+ +....... .
T Consensus 209 ~~~--------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~ 274 (357)
T PHA03209 209 VAP--------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSH 274 (357)
T ss_pred cCc--------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHH
Confidence 111 111246999999999999999999999999999999999966654 32111100 0
Q ss_pred hHHHHHh------hCCCC-CcHHHHHHHhhcCCCCCccccc--cchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 894 LHEWVKR------HYPHR-LDPIVEKAIAKYAPQHMPIYYN--KVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 894 l~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+...+.. .++.. ........+........+.... .........+.+++.+|++.||++|||+.|+++|
T Consensus 275 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 275 LLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 1111111 01100 0111111111111000000000 0001234566789999999999999999999876
No 254
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1e-33 Score=306.40 Aligned_cols=252 Identities=29% Similarity=0.465 Sum_probs=197.1
Q ss_pred CccccCCcEeEEEEEECC-------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 673 SLIGSGRFGHVYKGVLQD-------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+.||+|+||.||+|...+ +..||+|.+...........+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886554334567899999999999999999999999999999999999
Q ss_pred ccCcccccccccccC---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC-----CEEEccccc
Q 042568 746 MSNGSLENHLYPSHG---LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL-----TALVADFGI 817 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~-----~~kl~Dfgl 817 (983)
+++++|.+++..... ....+++..++.++.|+++|++|||+.+ ++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999865322 1245889999999999999999999986 99999999999999877 899999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHH
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~ 896 (983)
++........ .......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ......
T Consensus 158 ~~~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~--~~~~~~ 224 (269)
T cd05044 158 ARDIYKSDYY-----------RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN--NQEVLQ 224 (269)
T ss_pred cccccccccc-----------ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC--HHHHHH
Confidence 9765432111 11112346788999999999999999999999999999998 999985321 001111
Q ss_pred HHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 897 WVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
. +....... .....+..+.+++.+|++.+|++||+++++++.|.
T Consensus 225 ~----------------~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 225 H----------------VTAGGRLQ-------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred H----------------HhcCCccC-------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 00000000 01234577899999999999999999999999885
No 255
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.5e-34 Score=312.26 Aligned_cols=250 Identities=20% Similarity=0.305 Sum_probs=201.1
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.+|...+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++|+|++++++++...+..++||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 5788899999999999999995 47899999998654433 356788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 98 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred cCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 999999998853 35788999999999999999999986 9999999999999999999999999987654321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......|++.|+|||+..+..++.++||||||+++|++++|+.||.......... .
T Consensus 170 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-~--------- 226 (297)
T cd06656 170 S-------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-L--------- 226 (297)
T ss_pred c-------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-e---------
Confidence 1 1122468899999999999889999999999999999999999986421110000 0
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..... .+... ........+.+++.+|++.+|++||++++++++
T Consensus 227 --------~~~~~---~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 227 --------IATNG---TPELQ--NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred --------eccCC---CCCCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 00000 012244668899999999999999999999985
No 256
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1e-33 Score=307.48 Aligned_cols=258 Identities=26% Similarity=0.400 Sum_probs=202.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC------CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCcee
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ------DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKA 740 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 740 (983)
++|.....||+|+||.||+|+.+ +.+.||+|.+.....+.....+.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46778899999999999999964 245699998865544445678999999999999999999999999989999
Q ss_pred EEEecccCcccccccccccCc-----CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGL-----SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
+||||+++|+|.+++...... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998754321 125899999999999999999999996 999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCch
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSL 894 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l 894 (983)
|.+........ .......++..|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus 162 ~~~~~~~~~~~------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~----- 224 (275)
T cd05046 162 SLSKDVYNSEY------------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD----- 224 (275)
T ss_pred ccccccCcccc------------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-----
Confidence 99864322110 11122356788999999988888999999999999999999 7788753211
Q ss_pred HHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 895 HEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
...+.. ....... .+ . ...++..+.+++.+|++.+|++||++.|++++|+
T Consensus 225 ~~~~~~------------~~~~~~~--~~--~---~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 225 EEVLNR------------LQAGKLE--LP--V---PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHH------------HHcCCcC--CC--C---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 011111 0000000 00 0 0124567899999999999999999999999885
No 257
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5e-34 Score=308.51 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=196.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|...+.||+|+||.||+|... +++.||+|.++..... ....+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE-DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh-HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 35666788999999999999954 6888999998655432 345688899999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.. ...+++..++.++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 88 CGGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI 160 (267)
T ss_pred cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence 999999998864 345899999999999999999999996 9999999999999999999999999987654211
Q ss_pred ccccccCCCCccccccCccccccccccccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM---GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.......|+..|+|||++. ...++.++||||+||++|+|++|+.||....... ........
T Consensus 161 -------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-~~~~~~~~-- 224 (267)
T cd06645 161 -------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-ALFLMTKS-- 224 (267)
T ss_pred -------------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-hHHhhhcc--
Confidence 1112246899999999874 4567899999999999999999999975321100 00000000
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.... +.... ....+..+.+++.+|++.+|++||++++++++
T Consensus 225 -------------~~~~---~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 225 -------------NFQP---PKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred -------------CCCC---Ccccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0000 00000 00123567899999999999999999999864
No 258
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=7.4e-34 Score=310.22 Aligned_cols=272 Identities=22% Similarity=0.280 Sum_probs=197.4
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|...+.||+|+||.||+|... +|+.||+|.++..... .....+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777899999999999999965 6889999998654322 2346678899999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++ ++.+++... ...+++..++.++.||++||.|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CDQ-DLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 974 777766532 245899999999999999999999996 9999999999999999999999999998654221
Q ss_pred ccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. ......++..|+|||++.+. .++.++|||||||++|||++|+.|+.........+..........
T Consensus 154 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd07839 154 R-------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 220 (284)
T ss_pred C-------------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 1 11123578899999988764 468999999999999999999999643211111111111111000
Q ss_pred CCcHHHHHHHhhcCCC-CCccc-c----ccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQ-HMPIY-Y----NKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~-~~~~~-~----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
. ..... .+...... ..+.. . .........++.+++.+|++.||.+|||++|++++
T Consensus 221 ~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 221 T-EESWP-GVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred C-hHHhH-HhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0 00000 00000000 00000 0 00112245678899999999999999999999875
No 259
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.3e-33 Score=303.37 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=199.7
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecC-CceeEEEe
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKP-DFKALVLP 744 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e 744 (983)
+|+..+.||+|++|.||++... +++.||+|.+..... ....+.+.+|++++++++|+|++++++.+... ...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999965 578899999865432 23456788999999999999999999987644 45789999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++++|.+++.... ...+++.+++.++.|++.|++|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 999999999887532 345899999999999999999999996 999999999999999999999999999866422
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
.. ......|++.|+|||+..+..++.++||||+|+++++|++|+.||+.. ....+.
T Consensus 156 ~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~-----~~~~~~------ 211 (257)
T cd08223 156 CD-------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK-----DMNSLV------ 211 (257)
T ss_pred CC-------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CHHHHH------
Confidence 11 112346889999999999999999999999999999999999998632 111111
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
........+ .. ......++.+++.+|++.+|++||++.+++++
T Consensus 212 ------~~~~~~~~~-~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 212 ------YRIIEGKLP-PM-------PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ------HHHHhcCCC-CC-------ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 111111110 00 12345678999999999999999999999875
No 260
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.3e-33 Score=307.97 Aligned_cols=252 Identities=23% Similarity=0.321 Sum_probs=196.3
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
|++.+.||+|+||.||+|... ++..+|+|.+..... ...+.+.+|+++++.++|||++++++++......++|+||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH-HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 445678999999999999965 467789998854432 345678899999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+++|..++... ...+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 86 ~~~l~~~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-- 157 (282)
T cd06643 86 GGAVDAVMLEL---ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-- 157 (282)
T ss_pred CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc--
Confidence 99998877542 346899999999999999999999986 9999999999999999999999999987543211
Q ss_pred ccccCCCCccccccCccccccccccccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGM-----GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.......||..|+|||++. +..++.++||||+||++|||++|+.||..... . ..
T Consensus 158 -----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~-~~----- 216 (282)
T cd06643 158 -----------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP----M-RV----- 216 (282)
T ss_pred -----------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH----H-HH-----
Confidence 1112246899999999874 34577899999999999999999999863210 0 00
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.......... ..+ . ....+.++.+++.+||+.+|++||++.+++++-.
T Consensus 217 -------~~~~~~~~~~-~~~--~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 217 -------LLKIAKSEPP-TLA--Q---PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred -------HHHHhhcCCC-CCC--C---ccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 0010000000 000 0 0123467889999999999999999999987654
No 261
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.5e-34 Score=311.30 Aligned_cols=254 Identities=30% Similarity=0.485 Sum_probs=198.7
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcch-hHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEI-TGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
|+..+.||+|+||+||+++.. +++.||+|.+........ .....+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 456788999999999999976 456899999977654432 223456999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.. ...+++..+..++.|+++||+|||+.+ |+|+||||+||++++++.++|+|||.+..+....
T Consensus 81 ~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~- 152 (260)
T PF00069_consen 81 PGGSLQDYLQK----NKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSENN- 152 (260)
T ss_dssp TTEBHHHHHHH----HSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTSTT-
T ss_pred ccccccccccc----ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc-
Confidence 99999999872 456899999999999999999999996 9999999999999999999999999997642111
Q ss_pred cccccCCCCccccccCccccccccccccccC-CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.......+|..|+|||... +..++.++||||+|+++|+|++|+.||.... .....
T Consensus 153 ------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~--~~~~~---------- 208 (260)
T PF00069_consen 153 ------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN--SDDQL---------- 208 (260)
T ss_dssp ------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS--HHHHH----------
T ss_pred ------------ccccccccccccccccccccccccccccccccccccccccccccccccccc--chhhh----------
Confidence 1222356899999999998 8889999999999999999999999987430 00000
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+.+.......... ........++.+++.+|++.||++||++.+++++
T Consensus 209 --~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 209 --EIIEKILKRPLPSSS-----QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp --HHHHHHHHTHHHHHT-----TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred --hhhhhcccccccccc-----cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111111110000000 0001123789999999999999999999999864
No 262
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8e-34 Score=311.02 Aligned_cols=263 Identities=23% Similarity=0.302 Sum_probs=202.0
Q ss_pred CHHHHHHHhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEec
Q 042568 658 SYKQLIEATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSK 735 (983)
Q Consensus 658 ~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 735 (983)
+++++..++++|.+.+.||+|+||.||+|.. .+++.+|+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 3445556678999999999999999999996 468889999985432 2346778899999999 89999999999865
Q ss_pred C-----CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCE
Q 042568 736 P-----DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTA 810 (983)
Q Consensus 736 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~ 810 (983)
. +..++|+||+++++|.+++.........+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence 4 3579999999999999987643323456899999999999999999999986 9999999999999999999
Q ss_pred EEccccccccccCCcccccccCCCCccccccCccccccccccccccCCC-----CCCccchhHHHHHHHHHHHhCCCCCC
Q 042568 811 LVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-----RASTHGDVYSFGVLLLEIVTGRRPTD 885 (983)
Q Consensus 811 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~k~Dv~SlG~il~elltg~~p~~ 885 (983)
+|+|||++........ ......|+..|+|||.+... .++.++|||||||++|||++|+.||.
T Consensus 168 kl~dfg~~~~~~~~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~ 234 (291)
T cd06639 168 KLVDFGVSAQLTSTRL-------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLF 234 (291)
T ss_pred EEeecccchhcccccc-------------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCC
Confidence 9999999876542211 11123588999999987543 36889999999999999999999986
Q ss_pred cccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 886 VLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 886 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.... ... +.+.. ........ . ..+....+.+++.+|++.+|++||++.|++++
T Consensus 235 ~~~~----~~~-------------~~~~~-~~~~~~~~--~---~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 235 DMHP----VKT-------------LFKIP-RNPPPTLL--H---PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CCcH----HHH-------------HHHHh-cCCCCCCC--c---ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 4211 000 00000 00000000 0 01234568999999999999999999999875
No 263
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.7e-33 Score=305.18 Aligned_cols=256 Identities=26% Similarity=0.425 Sum_probs=198.1
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc---------chhHHHHHHHHHHHhcCCCCccceeeEEecCC
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG---------EITGSFKRECQILKRIRHRNLIRIITICSKPD 737 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 737 (983)
+|...+.||+|+||.||+|... +++.||+|.++..... ...+.+.+|++++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667889999999999999854 6889999988543211 12356888999999999999999999999999
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGI 817 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgl 817 (983)
..++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccc
Confidence 999999999999999988653 45889999999999999999999986 99999999999999999999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCCCC--CCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR--ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
++........ .......|+..|+|||...... ++.++||||+|+++||+++|+.||... ....
T Consensus 155 ~~~~~~~~~~-----------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~----~~~~ 219 (272)
T cd06629 155 SKKSDDIYDN-----------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE----EAIA 219 (272)
T ss_pred cccccccccc-----------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc----chHH
Confidence 9764321111 1112245889999999987654 789999999999999999999998531 1111
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+... .... .. +........+++.++.+++.+|+..+|++||+++|++++
T Consensus 220 ~~~~~------------~~~~-~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 220 AMFKL------------GNKR-SA---PPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred HHHHh------------hccc-cC---CcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11100 0000 00 000011112356789999999999999999999999875
No 264
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8.8e-34 Score=306.25 Aligned_cols=254 Identities=25% Similarity=0.382 Sum_probs=204.6
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
+|+..+.||+|+||.||+|... +++.||+|.+......+...++.+|++++++++||||+++++++......++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677889999999999999976 688899999876655555678999999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHH-HSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
++++|.+++.... ..+++..+..++.|+++|++|||+ .+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 82 DGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred CCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 9999999887532 568899999999999999999999 75 9999999999999999999999999987553211
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ....|+..|+|||+..+..++.++||||+|+++|+|++|+.||...........+
T Consensus 156 ~---------------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~--------- 211 (265)
T cd06605 156 A---------------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE--------- 211 (265)
T ss_pred h---------------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHH---------
Confidence 1 1146888999999999999999999999999999999999998643221111111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+....... ...+ . .....++.+++.+|+..+|++|||+.|++++
T Consensus 212 ---~~~~~~~~~~-~~~~---~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 212 ---LLQYIVNEPP-PRLP---S---GKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred ---HHHHHhcCCC-CCCC---h---hhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1111111111 0011 0 1145678999999999999999999999865
No 265
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1e-33 Score=314.27 Aligned_cols=198 Identities=25% Similarity=0.373 Sum_probs=158.6
Q ss_pred CCccccCCcEeEEEEEEC---CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEec--CCceeEEEecc
Q 042568 672 SSLIGSGRFGHVYKGVLQ---DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSK--PDFKALVLPLM 746 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 746 (983)
..+||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. ....++|+||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 467999999999999965 34679999886432 23567899999999999999999998843 45678999998
Q ss_pred cCccccccccccc-----CcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEe----CCCCCEEEccccc
Q 042568 747 SNGSLENHLYPSH-----GLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILL----DEDLTALVADFGI 817 (983)
Q Consensus 747 ~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl----~~~~~~kl~Dfgl 817 (983)
++ ++.+++.... .....+++..++.++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 75 6666553221 11235889999999999999999999996 9999999999999 5667999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCc
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDV 886 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~ 886 (983)
++......... .......||+.|+|||++.+ ..++.++||||+||++|||+||+.||..
T Consensus 159 a~~~~~~~~~~----------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 159 ARLFNSPLKPL----------ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eeccCCCcccc----------cccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 98764322110 11223578999999999876 4578999999999999999999999964
No 266
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.1e-33 Score=308.76 Aligned_cols=256 Identities=21% Similarity=0.309 Sum_probs=196.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHH-HHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQI-LKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
++|++.+.||+|+||.||+|+.. +|+.||+|.++.....+...++..|+.+ ++..+|||++++++++...+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888899999999999999965 6899999998765444344566667775 556689999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|++ |+|.+++.........+++..++.++.|++.|++|||++. +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 997 5887777543333457899999999999999999999872 3999999999999999999999999998765321
Q ss_pred cccccccCCCCccccccCccccccccccccccCC----CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG----KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
. ......|+..|+|||.+.+ ..++.++||||+|+++|+|++|+.||..... ....
T Consensus 158 ~--------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~---- 216 (283)
T cd06617 158 V--------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT---PFQQ---- 216 (283)
T ss_pred c--------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc---CHHH----
Confidence 1 1112358889999998765 4568899999999999999999999853211 1110
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
+...... .....+ . ...+.++.+++.+|+..+|++||++++++++-
T Consensus 217 ---------~~~~~~~-~~~~~~---~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 262 (283)
T cd06617 217 ---------LKQVVEE-PSPQLP---A---EKFSPEFQDFVNKCLKKNYKERPNYPELLQHP 262 (283)
T ss_pred ---------HHHHHhc-CCCCCC---c---cccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1111111 000000 0 12456789999999999999999999999753
No 267
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.6e-33 Score=302.55 Aligned_cols=251 Identities=20% Similarity=0.327 Sum_probs=202.3
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|+..+.||+|+||.||++... +++.||+|.+.... .....+++.+|++++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4778899999999999999954 68889999986543 223456789999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.... ...+++..++.++.|++.|++|||+.+ ++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQR--GVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 99999998886432 335789999999999999999999986 9999999999999999999999999998654321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......|++.|+|||+..+..++.++||||||+++++|++|+.||... ...
T Consensus 156 ~-------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~---------- 207 (256)
T cd08218 156 E-------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMK---------- 207 (256)
T ss_pred h-------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-----CHH----------
Confidence 1 111245888999999999888999999999999999999999998531 111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+..+..+...... . ......++.+++.+|++.+|++||++.||+++
T Consensus 208 --~~~~~~~~~~~~~-~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 208 --NLVLKIIRGSYPP-V-------SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred --HHHHHHhcCCCCC-C-------cccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1122222111110 0 11245678999999999999999999999875
No 268
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3e-33 Score=302.12 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=193.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC----cchhHHHHHHHHHHHhcCCCCccceeeEEec--CCce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT----GEITGSFKRECQILKRIRHRNLIRIITICSK--PDFK 739 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 739 (983)
.+|...+.||+|+||.||+|... ++..||+|.+..... .+....+.+|++++++++||||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999964 688999998864422 1234578899999999999999999998865 3567
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++++||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY----GALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 8999999999999988642 34788999999999999999999985 9999999999999999999999999987
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
........ ........|+..|+|||++.+..++.++||||+||++|||++|+.||.... ....
T Consensus 155 ~~~~~~~~----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~----~~~~--- 217 (266)
T cd06651 155 RLQTICMS----------GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE----AMAA--- 217 (266)
T ss_pred cccccccc----------CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc----hHHH---
Confidence 65321110 011112358899999999999889999999999999999999999986321 1110
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+............+ ......+.+++ +||..+|++||+++|++++
T Consensus 218 ----------~~~~~~~~~~~~~~-------~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 218 ----------IFKIATQPTNPQLP-------SHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred ----------HHHHhcCCCCCCCc-------hhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 11100000000011 12334556666 6888999999999999864
No 269
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-33 Score=301.94 Aligned_cols=247 Identities=31% Similarity=0.445 Sum_probs=196.4
Q ss_pred CCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
++|.+.+.||+|+||.||+|.. +++.||+|.++... ....+.+|++++++++|||++++++++... ..++||||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 3577889999999999999975 57889999985432 346789999999999999999999998654 579999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++.... ...+++..++.++.|+++|+.|||+.+ ++||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 81 SKGNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred CCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 9999999987543 345899999999999999999999986 9999999999999999999999999987543211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.....+..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+.
T Consensus 155 ---------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~-------- 206 (254)
T cd05083 155 ---------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----LKEV-------- 206 (254)
T ss_pred ---------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----HHHH--------
Confidence 01234568999999998889999999999999999998 999975321 1111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
.+ .+........ ...++.++.+++.+|++.+|++||+++++++.|++
T Consensus 207 ----~~-~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 207 ----KE-CVEKGYRMEP-------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ----HH-HHhCCCCCCC-------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11 1111110000 12245678899999999999999999999998763
No 270
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.5e-33 Score=307.21 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=197.4
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+.|++.+.||+|+||.||+|... +++.||+|.+.... .+....+.+|+++++.++|||++++++++......++||||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 45778899999999999999965 57889999986543 23467788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
++++++..++... ...+++..+..++.|+++|++|||+.+ ++||||||+||+++.++.++|+|||.+.......
T Consensus 91 ~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 91 CPGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred CCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 9999998876543 345899999999999999999999986 9999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-----GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
.......++..|+|||++. ...++.++|||||||++|||++|+.||..... ...
T Consensus 165 -------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~--- 223 (292)
T cd06644 165 -------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRV--- 223 (292)
T ss_pred -------------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHH---
Confidence 1112346889999999985 34567899999999999999999999853210 000
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
....... .....+ . ......++.+++.+|+..+|++||+++|++++
T Consensus 224 ---------~~~~~~~-~~~~~~--~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 224 ---------LLKIAKS-EPPTLS--Q---PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ---------HHHHhcC-CCccCC--C---CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0010000 000000 0 11244578899999999999999999999875
No 271
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=318.89 Aligned_cols=254 Identities=25% Similarity=0.422 Sum_probs=207.8
Q ss_pred CCCccccCCcEeEEEEEE-CCCc----EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 671 PSSLIGSGRFGHVYKGVL-QDNT----RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~-~~~~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
..++||+|+||+||||.+ +.|+ +||+|++......+...++.+|+-+|.+++|||+++++++|.... ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 468899999999999995 4454 379999877666667789999999999999999999999998766 7889999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
++.|+|.++++.+ +..+-....+.|..|||+|+.|||++ ++|||||-+.|||+.....+||+|||+|+...+..
T Consensus 779 mP~G~LlDyvr~h---r~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 779 MPLGCLLDYVREH---RDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred cccchHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999875 45688889999999999999999988 49999999999999999999999999999887655
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
.....+ ...-.+.|||=|.+....++.++|||||||++||++| |..|++....
T Consensus 853 ~ey~~~-----------~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--------------- 906 (1177)
T KOG1025|consen 853 KEYSAP-----------GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--------------- 906 (1177)
T ss_pred cccccc-----------ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH---------------
Confidence 432211 1123467999999999999999999999999999999 9999864321
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHh
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQ 967 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 967 (983)
+.+.+.+..... ++. .+-+..++..++.+||..|+..||+++++..++.++..
T Consensus 907 ---~eI~dlle~geR--Lsq-----PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 907 ---EEIPDLLEKGER--LSQ-----PPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred ---HHhhHHHhcccc--CCC-----CCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 112222222111 111 12377889999999999999999999999999987753
No 272
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.7e-33 Score=302.82 Aligned_cols=255 Identities=26% Similarity=0.434 Sum_probs=200.1
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc--------chhHHHHHHHHHHHhcCCCCccceeeEEecCCc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--------EITGSFKRECQILKRIRHRNLIRIITICSKPDF 738 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 738 (983)
+|.....||+|++|.||+|... +++.||+|.+...... +..+.+.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677899999999999999864 5788999988654321 123568899999999999999999999999999
Q ss_pred eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIA 818 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla 818 (983)
.++|+||+++++|.+++... ..+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.++|+|||.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY----GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCC
Confidence 99999999999999988642 45788999999999999999999986 999999999999999999999999999
Q ss_pred ccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 819 KLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
+.......... .........|+..|+|||.+.+..++.++||||+|+++|+|++|+.||.... .....
T Consensus 154 ~~~~~~~~~~~-------~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~- 221 (267)
T cd06628 154 KKLEANSLSTK-------TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT----QLQAI- 221 (267)
T ss_pred cccccccccCC-------ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc----HHHHH-
Confidence 87653211100 0011122458899999999998889999999999999999999999986421 11100
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
... ........+ ...+.++.+++.+|++.+|.+||++.|++++
T Consensus 222 ------------~~~-~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 222 ------------FKI-GENASPEIP-------SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ------------HHH-hccCCCcCC-------cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 000 000010111 1245678899999999999999999999864
No 273
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-34 Score=307.58 Aligned_cols=254 Identities=28% Similarity=0.443 Sum_probs=207.5
Q ss_pred CCCCccccCCcEeEEEEEEC---CCcE--EEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 670 CPSSLIGSGRFGHVYKGVLQ---DNTR--IAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~---~~~~--vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
...++||+|-||.||+|... .|+. ||||.-+.....+..+.|..|.-+|++++||||++++|.|.+. -.++|||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmE 470 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVME 470 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEe
Confidence 34678999999999999943 3443 8889888777777789999999999999999999999999865 4699999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
.++.|-|..+++.. +..++......++.||+.||+|||+. ++|||||...|||+.....+|++|||+++.+.+.
T Consensus 471 L~~~GELr~yLq~n---k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 471 LAPLGELREYLQQN---KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred cccchhHHHHHHhc---cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 99999999999865 45789999999999999999999998 5999999999999999999999999999987654
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.... . ....=...|||||-+.-++++.++|||.|||.+||++. |..||....+.+-
T Consensus 545 ~yYk----------a--S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV----------- 601 (974)
T KOG4257|consen 545 AYYK----------A--SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV----------- 601 (974)
T ss_pred chhh----------c--cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce-----------
Confidence 3221 1 11123467999999999999999999999999999988 9999865322110
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHh
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQ 967 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 967 (983)
...++. ..++| ..+.|+..+..++.+||+++|.+||.+.|+...|+++.+
T Consensus 602 ---I~~iEn------GeRlP-----~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 602 ---IGHIEN------GERLP-----CPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ---EEEecC------CCCCC-----CCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 000111 01111 124588999999999999999999999999999998865
No 274
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=9.9e-34 Score=308.48 Aligned_cols=253 Identities=24% Similarity=0.366 Sum_probs=199.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|++.+.||+|+||.||+|... ++..||+|.++.... ...+.+.+|++++++++|||++++++++......++||||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESE-EELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCH-HHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 46778889999999999999965 688899999865432 2456789999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++... ...+++..+..++.|++.|+.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 84 CDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred cCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 9999999988643 245899999999999999999999996 9999999999999999999999999987543211
Q ss_pred ccccccCCCCccccccCccccccccccccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-----GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
.......||+.|+|||.+. +..++.++||||||+++|||++|+.||...... .
T Consensus 158 -------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-----~---- 215 (280)
T cd06611 158 -------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-----R---- 215 (280)
T ss_pred -------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-----H----
Confidence 1112346899999999874 345678999999999999999999998642110 0
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
........ .. +... .......++.+++.+|++.+|.+||++.+++++-
T Consensus 216 --------~~~~~~~~-~~---~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (280)
T cd06611 216 --------VLLKILKS-EP---PTLD--QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHP 263 (280)
T ss_pred --------HHHHHhcC-CC---CCcC--CcccCCHHHHHHHHHHhccChhhCcCHHHHhcCh
Confidence 01111000 00 0000 0112346788999999999999999999999863
No 275
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.7e-33 Score=306.13 Aligned_cols=273 Identities=21% Similarity=0.276 Sum_probs=201.0
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
++|+..+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++++++|||++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999976 588999999865432 2234568899999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|++++++..+... ...+++..++.++.|+++||+|||+.+ ++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 9999888877643 235899999999999999999999986 999999999999999999999999999866432
Q ss_pred cccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||...... .....+. ....
T Consensus 154 ~~-------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~-~~~~ 218 (286)
T cd07847 154 GD-------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-DQLYLIR-KTLG 218 (286)
T ss_pred cc-------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH-HHhC
Confidence 21 1112357889999999876 45789999999999999999999998642211 1111111 1111
Q ss_pred CCCcHH---HHHH--Hhh--cCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HRLDPI---VEKA--IAK--YAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~---~~~~--~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...... .+.. ... .............+......+.+++.+|++.+|++||++.|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 219 DLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 110000 0000 000 000000000001122345778999999999999999999999864
No 276
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.8e-33 Score=310.60 Aligned_cols=266 Identities=24% Similarity=0.272 Sum_probs=204.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|...+.||+|+||.||+|... +++.||+|.+...... ...+.+..|+++++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36788899999999999999965 5889999999765433 24567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++.... ...+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 9999999999886432 356899999999999999999999986 99999999999999999999999999876543
Q ss_pred CcccccccCCC----------------CccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcc
Q 042568 824 IDESVNCANDS----------------MSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVL 887 (983)
Q Consensus 824 ~~~~~~~~~~~----------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~ 887 (983)
........... ...........||..|+|||+..+..++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 21110000000 00001122357899999999999988999999999999999999999998642
Q ss_pred cCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC----HHHHHHH
Q 042568 888 FHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS----MLDVAHE 961 (983)
Q Consensus 888 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs----~~evl~~ 961 (983)
... . .......... ..+. ....+.++.+++.+|++.+|++||+ ++|++++
T Consensus 236 ~~~-----~------------~~~~~~~~~~--~~~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 236 NRD-----E------------TFSNILKKEV--TFPG-----SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred chH-----H------------HHHHHhcCCc--cCCC-----ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 111 0 0111110000 0010 1114678999999999999999999 7777765
No 277
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-34 Score=305.97 Aligned_cols=255 Identities=26% Similarity=0.440 Sum_probs=207.0
Q ss_pred CCCCccccCCcEeEEEEEECC-CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 670 CPSSLIGSGRFGHVYKGVLQD-NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
...++||.|.||.||.|.|+. .-.||||.++.+..+ .++|..|..+|+.++|||+|+++|+|..+.-.|||+|||..
T Consensus 270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe--veEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred eeeeccCCCcccceeeeeeeccceeeehhhhhhcchh--HHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 356899999999999999875 456999999765543 78999999999999999999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.... +..++.-..+.++.||+.|++||..+. +||||+.+.|.|+.++-.+||+|||+++++..+...
T Consensus 348 GNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT- 421 (1157)
T KOG4278|consen 348 GNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT- 421 (1157)
T ss_pred ccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCcee-
Confidence 99999998754 455777788999999999999999984 999999999999999999999999999998643211
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
......=...|.|||-+....++.|+|||+|||++||+.| |-.||-.. ++.
T Consensus 422 -----------AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlS------------ 473 (1157)
T KOG4278|consen 422 -----------AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLS------------ 473 (1157)
T ss_pred -----------cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHH------------
Confidence 1111122457999999999999999999999999999999 66776321 111
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
++++ .+...+....| +.|+....+||+.||+++|.+||++.|+-+.++.+-..
T Consensus 474 qVY~-LLEkgyRM~~P-------eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 474 QVYG-LLEKGYRMDGP-------EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred HHHH-HHhccccccCC-------CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 1111 11222222111 35788999999999999999999999999999987544
No 278
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.4e-34 Score=319.63 Aligned_cols=242 Identities=25% Similarity=0.291 Sum_probs=186.7
Q ss_pred cccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhc---CCCCccceeeEEecCCceeEEEecccC
Q 042568 675 IGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRI---RHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 675 iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
||+|+||+||+|+.. +++.||||++..... ......+..|..++.+. +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999965 688999999864321 12234556677777665 699999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.++|+|||+++......
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--- 150 (330)
T cd05586 81 GELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN--- 150 (330)
T ss_pred ChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC---
Confidence 999888864 345899999999999999999999996 9999999999999999999999999987532211
Q ss_pred cccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
.......||+.|+|||.+.+. .++.++||||+||++|||++|+.||... ...+.
T Consensus 151 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-----~~~~~---------- 205 (330)
T cd05586 151 ----------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-----DTQQM---------- 205 (330)
T ss_pred ----------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-----CHHHH----------
Confidence 112235699999999998764 4789999999999999999999998531 11111
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC----CHHHHHHH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP----SMLDVAHE 961 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP----s~~evl~~ 961 (983)
....... ....+. .....++.+++.+|++.||.+|| ++.|++++
T Consensus 206 --~~~i~~~--~~~~~~------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 206 --YRNIAFG--KVRFPK------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred --HHHHHcC--CCCCCC------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 1111100 001110 11346778999999999999998 57777664
No 279
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.6e-33 Score=301.33 Aligned_cols=256 Identities=23% Similarity=0.384 Sum_probs=200.0
Q ss_pred CCCCCCccccCCcEeEEEEEECC--CcEEEEEEeeccc---------CcchhHHHHHHHHHHHh-cCCCCccceeeEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQD--NTRIAVKVLDLTT---------TGEITGSFKRECQILKR-IRHRNLIRIITICSK 735 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~--~~~vAvK~~~~~~---------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 735 (983)
+|+..+.||+|+||.||+|.... ++.+|+|.+.... ......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999999764 6789999875332 12234567788888875 799999999999999
Q ss_pred CCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 736 PDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 736 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
.+..+++|||+++++|.+++.........+++..+++++.|++.|+.|||+.. +++|+||||+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999887543333456899999999999999999999632 4999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
|.+....... ......|+..|+|||+..+..++.++||||||+++|||++|+.||... ...
T Consensus 159 g~~~~~~~~~--------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~-----~~~ 219 (269)
T cd08528 159 GLAKQKQPES--------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST-----NML 219 (269)
T ss_pred cceeeccccc--------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc-----CHH
Confidence 9998654321 112246889999999999988999999999999999999999998531 111
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.. .......... +.. ......++.+++.+|++.||++||++.|+..+++
T Consensus 220 ~~------------~~~~~~~~~~---~~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 220 SL------------ATKIVEAVYE---PLP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HH------------HHHHhhccCC---cCC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11 1111111000 000 0123467889999999999999999999999875
No 280
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.4e-33 Score=307.26 Aligned_cols=274 Identities=23% Similarity=0.314 Sum_probs=197.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|+..+.||+|++|.||+|... +++.||||.+...........+.+|++++++++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999965 67889999986554333345677899999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++ +|.+++... ...+++..+..++.|+++||.|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 85 ~~~-~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LDT-DLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 985 888877643 236889999999999999999999986 9999999999999999999999999987432111
Q ss_pred ccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. ......++..|+|||+..+ ..++.++||||+|+++|||++|+.||.........+..........
T Consensus 158 ~-------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 224 (291)
T cd07844 158 K-------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTP 224 (291)
T ss_pred c-------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCC
Confidence 0 0111246889999998876 4578999999999999999999999864321111111111110000
Q ss_pred CCcHHHHHHHh--hcCCCCC----ccccccchHHH--HHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIA--KYAPQHM----PIYYNKVWSDV--VLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~--~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.......... ....... +.......... ..++.+++.+|++.+|++|||+.|++++
T Consensus 225 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 225 -TEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred -ChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000000000 0000000 00000000011 2677899999999999999999998864
No 281
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-34 Score=285.39 Aligned_cols=277 Identities=22% Similarity=0.329 Sum_probs=213.4
Q ss_pred HHHHHHHhCCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecC
Q 042568 659 YKQLIEATGGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKP 736 (983)
Q Consensus 659 ~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 736 (983)
++++..-| .+.+|+|+|+.|--++ ..+|..||||++++. .+..+.+..+|++++.+.+ |+||++++++|.++
T Consensus 75 F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 75 FEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred HHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 55665555 4789999999999888 778999999999877 4557889999999999985 99999999999999
Q ss_pred CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC---CEEEc
Q 042568 737 DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL---TALVA 813 (983)
Q Consensus 737 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~---~~kl~ 813 (983)
+..|+|||-|.||+|..++++. .-+++.++.++.++||.||.|||.+| |.|||+||+|||..... -+|||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~----~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKR----KHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred ceEEEEEecccCchHHHHHHHh----hhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeee
Confidence 9999999999999999999864 45899999999999999999999997 99999999999997654 47999
Q ss_pred cccccccccCCcccccccCCCCccccccCccccccccccccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 042568 814 DFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-----GKRASTHGDVYSFGVLLLEIVTGRRPTDVLF 888 (983)
Q Consensus 814 Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~SlG~il~elltg~~p~~~~~ 888 (983)
||.+..-......- .... .....+.+|+..|||||+.. ...|+.++|.||+|||+|-|++|..||...-
T Consensus 222 DfDLgSg~k~~~~~---spas---tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~C 295 (463)
T KOG0607|consen 222 DFDLGSGIKLNNDC---SPAS---TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHC 295 (463)
T ss_pred ccccccccccCCCC---CCCC---CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCcc
Confidence 99998654322211 1111 12234468999999999753 2468899999999999999999999996543
Q ss_pred CCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 889 HDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 889 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+.+-. |-....=...+..+-..|++... ..-.+.|..++.+..+++...+..|+..|.++.+++.+
T Consensus 296 g~dCG---WdrGe~Cr~CQ~~LFesIQEGkY----eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 296 GADCG---WDRGEVCRVCQNKLFESIQEGKY----EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CCcCC---ccCCCccHHHHHHHHHHHhccCC----cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 32111 11110000111222222333222 12245788999999999999999999999999999874
No 282
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.4e-33 Score=307.71 Aligned_cols=260 Identities=25% Similarity=0.390 Sum_probs=201.4
Q ss_pred CHHHHHHHhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEec
Q 042568 658 SYKQLIEATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSK 735 (983)
Q Consensus 658 ~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 735 (983)
++.++....+.|++.+.||+|+||.||+|.. .+++.||+|.+..... ...++..|+.+++++ +|+|++++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED--EEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH--HHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 4555556678899999999999999999996 4678899999865432 346788899999998 69999999999842
Q ss_pred ------CCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCC
Q 042568 736 ------PDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLT 809 (983)
Q Consensus 736 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~ 809 (983)
....+++|||+++|+|.+++.... ...+++..+..++.|+++|++|||+.+ |+||||||+||+++.++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCC
Confidence 457799999999999999886533 345788889999999999999999986 999999999999999999
Q ss_pred EEEccccccccccCCcccccccCCCCccccccCccccccccccccccC-----CCCCCccchhHHHHHHHHHHHhCCCCC
Q 042568 810 ALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-----GKRASTHGDVYSFGVLLLEIVTGRRPT 884 (983)
Q Consensus 810 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~SlG~il~elltg~~p~ 884 (983)
++|+|||++....... .......|+..|+|||.+. +..++.++|||||||++|||++|+.||
T Consensus 160 ~~l~dfg~~~~~~~~~-------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~ 226 (282)
T cd06636 160 VKLVDFGVSAQLDRTV-------------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226 (282)
T ss_pred EEEeeCcchhhhhccc-------------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCc
Confidence 9999999987543211 1112346899999999875 346788999999999999999999998
Q ss_pred CcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 885 DVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 885 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..... .... .. +..... +... ...++.++.+++.+||..||++||++.|++++
T Consensus 227 ~~~~~----~~~~-------------~~-~~~~~~---~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 227 CDMHP----MRAL-------------FL-IPRNPP---PKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred cccCH----Hhhh-------------hh-HhhCCC---CCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 53211 0000 00 000000 0000 12345679999999999999999999999864
No 283
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-34 Score=316.27 Aligned_cols=280 Identities=25% Similarity=0.334 Sum_probs=206.9
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecC------Ccee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKP------DFKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 740 (983)
.|...+.||+|+||.||+|++ .+|+.||||.+.........++..+|++++++++|+|||++++.-.+. +...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 355678899999999999994 579999999998776666788999999999999999999999876443 4678
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeC--CCC--CEEEcccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLD--EDL--TALVADFG 816 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~--~~~--~~kl~Dfg 816 (983)
+|||||.+|+|...+..-.. ...+++.+.+.+..+++.||.|||+++ ||||||||.||++- .+| .-||+|||
T Consensus 94 lvmEyC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEEeecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 99999999999999976443 667999999999999999999999986 99999999999983 333 46999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccC-CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
.|+.+++.. .....+||..|.+||+.. .+.|+..+|.|||||++|+++||..||....+......
T Consensus 170 ~Arel~d~s--------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~ 235 (732)
T KOG4250|consen 170 AARELDDNS--------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKE 235 (732)
T ss_pred ccccCCCCC--------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccch
Confidence 999876543 223468999999999998 48899999999999999999999999976443332211
Q ss_pred HHHHh--hCCCCCcHHHHHHHhh-c-CCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC--CHHHHHHHHHHhH
Q 042568 896 EWVKR--HYPHRLDPIVEKAIAK-Y-APQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP--SMLDVAHEMGRLK 966 (983)
Q Consensus 896 ~~~~~--~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP--s~~evl~~L~~~~ 966 (983)
-+... ..+..+.-...+...+ . ....+|.+ ..........+...+..++..+|++|. ...+....+..|.
T Consensus 236 ~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p-~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 236 IMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQP-NHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred hhhhhhccCCCceeEeeecccCCceeeeccCCCc-ccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence 11111 1111111111111100 0 00111111 001122344566667778899999998 7777777666553
No 284
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4e-33 Score=300.92 Aligned_cols=256 Identities=22% Similarity=0.283 Sum_probs=200.9
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEec--CCceeEEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSK--PDFKALVL 743 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 743 (983)
+|+..+.||+|+||.||+|... +++.||+|.++... .....+++..|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4777899999999999999854 67889999986543 23345678899999999999999999998754 34578999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccC--CCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHS--PIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~--~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
||+++++|.+++........++++..++.++.|+++||+|||..+ ..+++|+||||+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998764433567899999999999999999999332 225999999999999999999999999999876
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
..... ......|+..|+|||.+.+..++.++||||||+++++|++|+.||.... ...+.
T Consensus 161 ~~~~~-------------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~--- 219 (265)
T cd08217 161 GHDSS-------------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLA--- 219 (265)
T ss_pred cCCcc-------------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHH---
Confidence 43221 0122468999999999999889999999999999999999999986421 11111
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+.+........+ ...+.++.+++.+|++.+|++||++++|+++
T Consensus 220 ----------~~~~~~~~~~~~-------~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 220 ----------SKIKEGKFRRIP-------YRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ----------HHHhcCCCCCCc-------cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 111111111111 1345678999999999999999999999875
No 285
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.4e-33 Score=302.78 Aligned_cols=247 Identities=25% Similarity=0.410 Sum_probs=199.9
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
|...+.||+|+||.||+|... +++.||+|.+.........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 556788999999999999864 6788999998655444456788999999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+++|.+++.. ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 86 ~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06641 86 GGSALDLLEP-----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchh-
Confidence 9999988863 35889999999999999999999986 99999999999999999999999999876542210
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
......|+..|+|||...+..++.++|||||||++|+|++|+.||..... ..+..
T Consensus 157 ------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~-------- 211 (277)
T cd06641 157 ------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLF-------- 211 (277)
T ss_pred ------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHH--------
Confidence 11123578899999999888889999999999999999999999863211 00000
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
. +..... +.. ....+.++.+++.+|++.+|++||++++++++
T Consensus 212 ----~-~~~~~~---~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 212 ----L-IPKNNP---PTL----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ----H-HhcCCC---CCC----CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0 101000 000 01245678899999999999999999999996
No 286
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.1e-33 Score=307.36 Aligned_cols=245 Identities=23% Similarity=0.327 Sum_probs=195.2
Q ss_pred CCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcc
Q 042568 672 SSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGS 750 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 750 (983)
...||+|+||.||++... ++..||||.++.... ...+.+.+|+.+++.++|+|++++++.+...+..++||||+++++
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ-QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchH-HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 467999999999999964 688899999865433 245678899999999999999999999999999999999999999
Q ss_pred cccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccc
Q 042568 751 LENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNC 830 (983)
Q Consensus 751 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~ 830 (983)
|.+++.. ..+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 106 L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~----- 172 (292)
T cd06658 106 LTDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV----- 172 (292)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc-----
Confidence 9988752 35889999999999999999999996 9999999999999999999999999987543211
Q ss_pred cCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHH
Q 042568 831 ANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIV 910 (983)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 910 (983)
.......|+..|+|||+..+..++.++||||||+++|||++|+.||.... ... .+
T Consensus 173 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~----~~~-------------~~ 227 (292)
T cd06658 173 --------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP----PLQ-------------AM 227 (292)
T ss_pred --------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHH-------------HH
Confidence 11122468999999999988889999999999999999999999985311 100 00
Q ss_pred HHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 911 EKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.. +....+...+. .......+.+++.+|+..+|++|||++|++++
T Consensus 228 ~~-~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 228 RR-IRDNLPPRVKD-----SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HH-HHhcCCCcccc-----ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 10101100000 01234568889999999999999999999986
No 287
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.7e-33 Score=302.61 Aligned_cols=239 Identities=23% Similarity=0.397 Sum_probs=185.8
Q ss_pred CccccCCcEeEEEEEECC--------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 673 SLIGSGRFGHVYKGVLQD--------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
+.||+|+||.||+|.... ...||+|.+.... ....+.+.+|+.+++.++|||++++++++...+..++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 469999999999998642 2348888875432 2345678899999999999999999999999899999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCC--------EEEcccc
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLT--------ALVADFG 816 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~--------~kl~Dfg 816 (983)
|+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. ++++|||
T Consensus 80 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 80 YVKFGSLDTYLKKNK---NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred cCCCCcHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccc
Confidence 999999999987542 35889999999999999999999986 999999999999987765 5899999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCC-CCCCcccCCCCch
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGR-RPTDVLFHDGSSL 894 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~-~p~~~~~~~~~~l 894 (983)
.+...... ....++..|+|||++.+ ..++.++||||||+++|||++|. .||.....
T Consensus 154 ~~~~~~~~-----------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~----- 211 (258)
T cd05078 154 ISITVLPK-----------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS----- 211 (258)
T ss_pred cccccCCc-----------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-----
Confidence 88654321 12457889999999887 45789999999999999999995 45432100
Q ss_pred HHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 895 HEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.. ....... ....+. ....++.+++.+|++.+|++|||+++++++|
T Consensus 212 ~~-------------~~~~~~~--~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 212 QK-------------KLQFYED--RHQLPA-------PKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HH-------------HHHHHHc--cccCCC-------CCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00 0000000 001111 1235688999999999999999999999986
No 288
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.2e-33 Score=302.30 Aligned_cols=250 Identities=23% Similarity=0.352 Sum_probs=200.0
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcC---CCCccceeeEEecCCceeEEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIR---HRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 743 (983)
.|+..+.||+|+||.||+|.+ .+++.||+|.++........+++.+|++++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 466788999999999999996 4688999999876555555678899999999997 999999999999989999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++.. ..+++..++.++.|+++||.|||+.+ |+||||+|+||+++.++.++|+|||.+..+..
T Consensus 82 e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 99999999988753 36899999999999999999999996 99999999999999999999999999987653
Q ss_pred CcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
... ......|+..|+|||+..+ ..++.++||||||+++|+|++|+.||..... ...+..
T Consensus 154 ~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~~~~~~-- 213 (277)
T cd06917 154 NSS-------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMML-- 213 (277)
T ss_pred Ccc-------------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh-----hhhhhc--
Confidence 221 1122468899999998875 4568899999999999999999999864211 010000
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
+........+ ....+.++.+++.+|++.||++||++.|++++-
T Consensus 214 -----------~~~~~~~~~~------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~ 256 (277)
T cd06917 214 -----------IPKSKPPRLE------DNGYSKLLREFVAACLDEEPKERLSAEELLKSK 256 (277)
T ss_pred -----------cccCCCCCCC------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhCh
Confidence 0000000000 011456788999999999999999999998753
No 289
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7.3e-33 Score=300.50 Aligned_cols=258 Identities=29% Similarity=0.450 Sum_probs=197.2
Q ss_pred CCCCCccccCCcEeEEEEEEC----CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCC------
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ----DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPD------ 737 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 737 (983)
|.+.+.||+|+||.||+|.+. +++.||||++..... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999853 367899999865432 234567889999999999999999999885432
Q ss_pred ceeEEEecccCcccccccccccC--cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHG--LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
..++++||+++|+|.+++..... ....+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 23688999999999887653221 1235789999999999999999999986 999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCch
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSL 894 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l 894 (983)
|.++........ .......+++.|++||...+..++.++||||||+++|||++ |+.||..... ...
T Consensus 158 g~~~~~~~~~~~-----------~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~ 224 (273)
T cd05074 158 GLSKKIYSGDYY-----------RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEI 224 (273)
T ss_pred cccccccCCcce-----------ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHH
Confidence 999865432111 11112345678999999998889999999999999999999 8888753211 111
Q ss_pred HHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 895 HEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
..++. .......+ ...+.++.+++.+|++.+|++||++.|+++.|+++
T Consensus 225 ~~~~~----------------~~~~~~~~-------~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 225 YNYLI----------------KGNRLKQP-------PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHH----------------cCCcCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 10000000 12446899999999999999999999999999875
No 290
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=311.73 Aligned_cols=249 Identities=23% Similarity=0.377 Sum_probs=197.3
Q ss_pred CCCCCccccCCcEeEEEEEECCCcE-EEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQDNTR-IAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~~~~~-vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
|.+...||.|+||.||+|+.++... .|-|++.... ++..+.|..|++|+....||+||++++.|...+..+|..|||.
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks-eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS-EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc-hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 4455679999999999999774443 5778876554 3468899999999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
||-++..+-.- .+.+.+.++.-+++|++.||.|||++ +|||||+|+.|||++.+|.++++|||.+.....
T Consensus 113 GGAVDaimlEL---~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~---- 182 (1187)
T KOG0579|consen 113 GGAVDAIMLEL---GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS---- 182 (1187)
T ss_pred CchHhHHHHHh---ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh----
Confidence 99999887643 56799999999999999999999999 499999999999999999999999998754321
Q ss_pred ccccCCCCccccccCccccccccccccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGM-----GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.......++|||.|||||+.. ..+|+.++||||||+++.||..+.+|-.. -..+.-.+
T Consensus 183 ---------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe----lnpMRVll---- 245 (1187)
T KOG0579|consen 183 ---------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE----LNPMRVLL---- 245 (1187)
T ss_pred ---------HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc----cchHHHHH----
Confidence 112345578999999999864 46899999999999999999999998432 11121111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccc-cccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIY-YNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
++.....|.. ....| ...+.+++.+|+..||..||++.++++|
T Consensus 246 -------------KiaKSePPTLlqPS~W---s~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 246 -------------KIAKSEPPTLLQPSHW---SRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred -------------HHhhcCCCcccCcchh---hhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 1111112222 12234 3567777888999999999999999975
No 291
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.2e-33 Score=299.76 Aligned_cols=237 Identities=25% Similarity=0.425 Sum_probs=187.0
Q ss_pred CccccCCcEeEEEEEECCCc-----------EEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 673 SLIGSGRFGHVYKGVLQDNT-----------RIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~~~-----------~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
+.||+|+||.||+|.+.+.. .||+|.+...... ...+.+|++++++++||||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 46899999999999976433 4788877544332 5788999999999999999999999987 77899
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC-------CEEEcc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL-------TALVAD 814 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~-------~~kl~D 814 (983)
|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .++|+|
T Consensus 78 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 78 VEEYVKFGPLDVFLHREK---NNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEEcCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCC
Confidence 999999999999987542 26899999999999999999999985 99999999999999887 799999
Q ss_pred ccccccccCCcccccccCCCCccccccCccccccccccccccCCC--CCCccchhHHHHHHHHHHHh-CCCCCCcccCCC
Q 042568 815 FGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK--RASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDG 891 (983)
Q Consensus 815 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~ 891 (983)
||++...... ....++..|+|||++.+. .++.++||||||+++|||++ |..||.....
T Consensus 152 fg~a~~~~~~-----------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-- 212 (259)
T cd05037 152 PGIPITVLSR-----------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-- 212 (259)
T ss_pred CCcccccccc-----------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--
Confidence 9999865321 113467789999998876 78999999999999999999 5667653211
Q ss_pred CchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 892 SSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 892 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.....+ ... ....+.. ....+.+++.+|+..+|++||++.|+++.|
T Consensus 213 ~~~~~~----------------~~~--~~~~~~~-------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 213 SEKERF----------------YQD--QHRLPMP-------DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred hhHHHH----------------Hhc--CCCCCCC-------CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000000 000 0001100 116788999999999999999999999876
No 292
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6.8e-33 Score=299.81 Aligned_cols=257 Identities=22% Similarity=0.408 Sum_probs=201.2
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCc-----chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTG-----EITGSFKRECQILKRIRHRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 741 (983)
+|+..+.||+|+||.||+|.. .+++.||+|.+...... +....+.+|++++++++|+|++++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999995 57889999998654321 235678999999999999999999999999999999
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC-CEEEcccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL-TALVADFGIAKL 820 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~-~~kl~Dfgla~~ 820 (983)
|+||+++++|.+++.. ..++++..+..++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999998864 245889999999999999999999996 99999999999998776 599999999987
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
+....... ........||..|+|||...+..++.++||||+|+++|+|++|+.||..... ......+.
T Consensus 154 ~~~~~~~~---------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~- 221 (268)
T cd06630 154 LAAKGTGA---------GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH--SNHLALIF- 221 (268)
T ss_pred cccccccC---------CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--cchHHHHH-
Confidence 65321110 0112234689999999999888899999999999999999999999853211 11111110
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
........... ......++.+++.+|+..+|++||++.|++++
T Consensus 222 -----------~~~~~~~~~~~-------~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 222 -----------KIASATTAPSI-------PEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred -----------HHhccCCCCCC-------chhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 00000011001 12355778999999999999999999999864
No 293
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.8e-33 Score=302.98 Aligned_cols=256 Identities=24% Similarity=0.353 Sum_probs=200.1
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCC-----
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPD----- 737 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~----- 737 (983)
.+++|+..+.||+|++|.||+|... +++.||+|++..... ..+++.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4678999999999999999999975 578899999865443 346799999999999 6999999999996544
Q ss_pred -ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 738 -FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 738 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
..++||||+++++|.+++.........+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence 479999999999999988654323456899999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCC-----CCCCccchhHHHHHHHHHHHhCCCCCCcccCCC
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-----KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDG 891 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~ 891 (983)
.+....... .......|+..|+|||++.. ..++.++||||||+++|+|++|+.||..... .
T Consensus 159 ~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~ 224 (275)
T cd06608 159 VSAQLDSTL-------------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-M 224 (275)
T ss_pred cceecccch-------------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-H
Confidence 987654221 11122468999999998753 3467899999999999999999999863211 0
Q ss_pred CchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 892 SSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 892 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.... +....... .. . ...+...++.+++.+|+..||++|||++|++++
T Consensus 225 ~~~~----------------~~~~~~~~-~~---~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 225 RALF----------------KIPRNPPP-TL---K--SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred HHHH----------------HhhccCCC-CC---C--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0010 10000000 00 0 011245678899999999999999999999864
No 294
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=8.7e-33 Score=297.07 Aligned_cols=252 Identities=28% Similarity=0.478 Sum_probs=200.1
Q ss_pred CCCCCccccCCcEeEEEEEECC-----CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQD-----NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
|++.+.||+|+||.||++...+ +..||+|.+......+..+.+..|+++++.++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3467889999999999999753 37799999976655445678999999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++.... ...+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.++++|||.++....
T Consensus 81 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccc
Confidence 9999999999987532 122899999999999999999999996 99999999999999999999999999987653
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.... .. ....+++.|+|||...+..++.++||||+|+++++|++ |+.||... .....
T Consensus 156 ~~~~----------~~--~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-----~~~~~----- 213 (258)
T smart00219 156 DDYY----------KK--KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-----SNEEV----- 213 (258)
T ss_pred cccc----------cc--ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CHHHH-----
Confidence 3111 00 01237789999999988889999999999999999998 78887531 11111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.+. +........+ ...+.++.+++.+|+..+|++|||+.|+++.|
T Consensus 214 -------~~~-~~~~~~~~~~-------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 214 -------LEY-LKKGYRLPKP-------ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------HHH-HhcCCCCCCC-------CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111 1111110011 12456789999999999999999999998764
No 295
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.3e-33 Score=305.08 Aligned_cols=274 Identities=24% Similarity=0.311 Sum_probs=198.8
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|+..+.||+|++|.||+|+.. +++.||||.++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999965 6889999988654322 2346788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+. ++|.+++.... ...+++..+..++.|+++||+|||+.+ ++||||+|+||+++.++.++|+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 58888776433 356899999999999999999999986 9999999999999999999999999987654221
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCC-CCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR-ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. ......++..|+|||...+.. ++.++||||||+++|||+||+.||..... .......+...-..
T Consensus 155 ~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~ 220 (284)
T cd07860 155 R-------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTP 220 (284)
T ss_pred c-------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCC
Confidence 1 111234688999999887644 58899999999999999999999853211 11111111111110
Q ss_pred C--CcHHHHHH--HhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 R--LDPIVEKA--IAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
. ..+..... .........+............++.+++.+|++.||++||+++|++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 221 DEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred ChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0 00000000 000000000000000111234668899999999999999999999864
No 296
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.9e-33 Score=312.97 Aligned_cols=280 Identities=21% Similarity=0.299 Sum_probs=201.4
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCC-----ce
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPD-----FK 739 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 739 (983)
+++|.+.+.||+|+||.||+|... +++.||||.++.........++.+|++++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999854 688999999865443445567889999999999999999999875443 46
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++|+||+++ ++.+.+. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++.
T Consensus 84 ~lv~e~~~~-~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELMET-DLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhccc-CHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECccccee
Confidence 899999975 7766664 345899999999999999999999996 9999999999999999999999999998
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
......... .......||..|+|||.+.+ ..++.++||||+||++|+|++|+.||... +.......+
T Consensus 155 ~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~--~~~~~~~~~ 222 (336)
T cd07849 155 IADPEHDHT----------GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK--DYLHQLNLI 222 (336)
T ss_pred ecccccccc----------CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHH
Confidence 654322110 11123468999999998755 56889999999999999999999998532 111111111
Q ss_pred HhhCCCCCcHHHHH----HHhh---cCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH--HHHhH
Q 042568 899 KRHYPHRLDPIVEK----AIAK---YAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE--MGRLK 966 (983)
Q Consensus 899 ~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~~ 966 (983)
.........+..+. .... ..+................++.+++.+|++.+|++||++.|++++ ++...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 223 LGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 11111111111110 0000 000000000000112235678999999999999999999999987 55443
No 297
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.8e-33 Score=306.32 Aligned_cols=256 Identities=24% Similarity=0.292 Sum_probs=193.8
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEEecc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
|...+.||+|+||.||++... +++.||+|.+...........+.+|+.++.++. |+||+++++++..+...+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 445678999999999999965 578999999876554445678899999999996 999999999999889999999998
Q ss_pred cCcccccccccc-cCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 747 SNGSLENHLYPS-HGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 747 ~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
.. ++.++.... ......+++..+..++.|+++||+|||+.. +++||||||+||+++.++.++|+|||+++......
T Consensus 86 ~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 86 DI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred cC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 64 554432211 111356899999999999999999999752 49999999999999999999999999997654211
Q ss_pred ccccccCCCCccccccCccccccccccccccCCC---CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK---RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
. .....|+..|+|||.+.+. .++.++||||+||++|||++|+.||.... ...+.+..
T Consensus 163 ~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~-- 222 (288)
T cd06616 163 A--------------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQ-- 222 (288)
T ss_pred c--------------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhh--
Confidence 1 1123588899999998776 68899999999999999999999985321 11111111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.... ..+......+...+.++.+++.+|++.+|++|||+++|+++
T Consensus 223 ----------~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 223 ----------VVKG----DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ----------hcCC----CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00111111112356789999999999999999999999976
No 298
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=7e-33 Score=297.49 Aligned_cols=250 Identities=23% Similarity=0.365 Sum_probs=200.0
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|+..+.||+|+||.||+|... +++.+|||.+.... ..+....+.+|++++++++|||++++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999999964 67889999986543 223467889999999999999999999999988999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC-CCEEEccccccccccCC
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED-LTALVADFGIAKLVKGI 824 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~-~~~kl~Dfgla~~~~~~ 824 (983)
+++++|.+++.... ...+++..+..++.|+++|++|||+++ ++||||||+||+++++ +.++++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999999987543 345899999999999999999999986 9999999999999865 46899999999866432
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
.. .....|+..|+|||...+..++.++||||||+++|+|++|+.||+... ....+
T Consensus 156 ~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----~~~~~------ 210 (256)
T cd08220 156 SK--------------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN-----LPALV------ 210 (256)
T ss_pred cc--------------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc-----hHHHH------
Confidence 11 112468899999999998888999999999999999999999985321 11111
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
......... ..+ ...+.++.+++.+|++.+|++|||+.|++++
T Consensus 211 ------~~~~~~~~~-~~~-------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 211 ------LKIMSGTFA-PIS-------DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ------HHHHhcCCC-CCC-------CCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111111000 000 1245678999999999999999999999875
No 299
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9.9e-33 Score=297.99 Aligned_cols=253 Identities=23% Similarity=0.310 Sum_probs=195.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC----cchhHHHHHHHHHHHhcCCCCccceeeEEecC--Cce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT----GEITGSFKRECQILKRIRHRNLIRIITICSKP--DFK 739 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 739 (983)
.+|...+.||+|+||.||+|... ++..||||.+..... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999964 588999998854321 12346788999999999999999999988664 456
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++||||+++++|.+++... ..+++..+.+++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY----GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccc
Confidence 7999999999999988642 34788899999999999999999996 9999999999999999999999999988
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
........ ........|+..|+|||...+..++.++||||||+++|||++|+.||.... ....
T Consensus 155 ~~~~~~~~----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~~~~--- 217 (265)
T cd06652 155 RLQTICLS----------GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE----AMAA--- 217 (265)
T ss_pred cccccccc----------ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc----hHHH---
Confidence 65421110 011122458899999999988889999999999999999999999985321 0010
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+............ .......+.+++.+|+. +|++||+++|++++
T Consensus 218 ----------~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 218 ----------IFKIATQPTNPVL-------PPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ----------HHHHhcCCCCCCC-------chhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 1110000000001 12345677888889984 99999999999865
No 300
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.5e-34 Score=328.58 Aligned_cols=265 Identities=24% Similarity=0.370 Sum_probs=191.5
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecC--------
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKP-------- 736 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 736 (983)
..+|+..++||+||||.|||++.+ ||+.||||++.............+|++.+.+++|||||+++..+.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 345777889999999999999966 89999999998776666678899999999999999999987553110
Q ss_pred --------------------------------------------------------------------------------
Q 042568 737 -------------------------------------------------------------------------------- 736 (983)
Q Consensus 737 -------------------------------------------------------------------------------- 736 (983)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred -------------------------------CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHh
Q 042568 737 -------------------------------DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLH 785 (983)
Q Consensus 737 -------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH 785 (983)
...||-||||+..++.+++....-. -.....++++++|++||+|+|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHHHHHH
Confidence 0125667777776666666543211 146778999999999999999
Q ss_pred ccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC----Ccccccc-cCCCCccccccCccccccccccccccCCC-
Q 042568 786 HHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG----IDESVNC-ANDSMSFTSTDGLLCGSVGYIAPEYGMGK- 859 (983)
Q Consensus 786 ~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~----~~~~~~~-~~~~~~~~~~~~~~~gt~~y~aPE~~~~~- 859 (983)
++| ||||||||.||++|++..|||+|||+|+.... .+..... ....-......+..+||.-|+|||.+.+.
T Consensus 715 ~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 997 99999999999999999999999999998321 1100000 00000001123446899999999998775
Q ss_pred --CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHH
Q 042568 860 --RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLEL 937 (983)
Q Consensus 860 --~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 937 (983)
.|+.|+|+||+|||++||+. ||....+. ...+........|.. ...+.+...+-
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER--------------------a~iL~~LR~g~iP~~-~~f~~~~~~~e 847 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMER--------------------ASILTNLRKGSIPEP-ADFFDPEHPEE 847 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHH--------------------HHHHHhcccCCCCCC-cccccccchHH
Confidence 49999999999999999996 55432111 111112222222222 22234455667
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHH
Q 042568 938 IELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 938 ~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
..++.++++.||.+|||+.|+++
T Consensus 848 ~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 848 ASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHHhcCCCccCCCHHHHhh
Confidence 88999999999999999999985
No 301
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.3e-32 Score=296.87 Aligned_cols=256 Identities=26% Similarity=0.406 Sum_probs=202.5
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|...+.||+|+||.||+|... +++.||+|.++..... +..+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5778899999999999999964 6889999998765432 3567899999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++... ..+++..+..++.|+++|++|||+.+ |+|+||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEHG----RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhhc----CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 9999999988742 34788999999999999999999986 9999999999999999999999999998765432
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCC---CCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR---ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
... ........++..|+|||++.+.. ++.++||||||+++||+++|+.||...... ...
T Consensus 154 ~~~---------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~-------- 215 (264)
T cd06626 154 TTM---------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQI-------- 215 (264)
T ss_pred Ccc---------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHH--------
Confidence 211 01012246788999999988766 889999999999999999999998642110 000
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...+........+ .+......+.+++.+|++.+|++||++.|++.+
T Consensus 216 --------~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 216 --------MFHVGAGHKPPIP-----DSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred --------HHHHhcCCCCCCC-----cccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000110111111 112245678899999999999999999998753
No 302
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.3e-33 Score=304.92 Aligned_cols=247 Identities=21% Similarity=0.305 Sum_probs=196.3
Q ss_pred CCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcc
Q 042568 672 SSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGS 750 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 750 (983)
...||+|+||.||+|... +++.||+|.++..... ..+.+.+|+.+++.++|||++++++++...+..++|+||+++++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ-RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc-hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 457999999999999964 6889999998654332 35678899999999999999999999999999999999999999
Q ss_pred cccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccc
Q 042568 751 LENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNC 830 (983)
Q Consensus 751 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~ 830 (983)
|.+++. ...+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 105 L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~---- 172 (297)
T cd06659 105 LTDIVS-----QTRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP---- 172 (297)
T ss_pred HHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccc----
Confidence 988764 345889999999999999999999986 99999999999999999999999999875432111
Q ss_pred cCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHH
Q 042568 831 ANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIV 910 (983)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 910 (983)
......|+..|+|||+..+..++.++||||||+++|||++|+.||.... ... ...
T Consensus 173 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~~~-~~~----------- 227 (297)
T cd06659 173 ---------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS----PVQ-AMK----------- 227 (297)
T ss_pred ---------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHH-HHH-----------
Confidence 1122468999999999998889999999999999999999999985311 100 000
Q ss_pred HHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 911 EKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.+....... ...+.....++.+++.+|++.+|++||++++++++--
T Consensus 228 --~~~~~~~~~-----~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~ 273 (297)
T cd06659 228 --RLRDSPPPK-----LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPF 273 (297)
T ss_pred --HHhccCCCC-----ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChh
Confidence 010000000 0011123456889999999999999999999998643
No 303
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=8.7e-33 Score=302.12 Aligned_cols=272 Identities=24% Similarity=0.326 Sum_probs=201.8
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|...+.||+|+||.||+|... +++.||||.+..... ......+.+|++++++++|||++++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999964 688999999876543 33457899999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+ +++|.+++... ...+++..++.++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 99999988643 256899999999999999999999986 9999999999999999999999999998664322
Q ss_pred ccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. .......|+..|+|||++.+. .++.++||||+|+++|||++|+.||.... +...+. .+......
T Consensus 154 ~------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-~~~~~~-~~~~~~~~ 219 (286)
T cd07832 154 P------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN-DIEQLA-IVFRTLGT 219 (286)
T ss_pred C------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC-HHHHHH-HHHHHcCC
Confidence 1 011123688999999998764 46899999999999999999987775321 111111 11111110
Q ss_pred CCcHHHHHHHh------h-cCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIA------K-YAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..... .+... . ..+...+........+...++.+++.+|++.+|++||++++++++
T Consensus 220 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 220 PNEET-WPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CChHH-HhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 00000 0 000000000011112345789999999999999999999999875
No 304
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=6.6e-33 Score=303.68 Aligned_cols=251 Identities=21% Similarity=0.304 Sum_probs=201.2
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|...+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.++++++|||++++++++...+..++|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccch-HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 57888999999999999999854 6788999998644332 356788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.. ..+++..+..++.|+++|++|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 98 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred CCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 999999998863 35789999999999999999999996 9999999999999999999999999987554321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
. ......|++.|+|||+..+..++.++||||||+++|++++|+.||........ ....
T Consensus 170 ~-------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~~-------- 227 (293)
T cd06647 170 S-------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLI-------- 227 (293)
T ss_pred c-------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eeeh--------
Confidence 1 11224688999999999888889999999999999999999999864211100 0000
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.... .+. ..........+.+++.+||+.+|++||++.+++.+=
T Consensus 228 ---------~~~~---~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 228 ---------ATNG---TPE--LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred ---------hcCC---CCC--CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 0000 000 001123456788999999999999999999999874
No 305
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.6e-33 Score=305.11 Aligned_cols=274 Identities=23% Similarity=0.340 Sum_probs=199.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
++|+..+.||+|+||.||+|.++ +++.||+|++...... ...+.+.+|+++++.++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36788899999999999999975 5888999998654322 235678899999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|++++++.++... ...+++..++.++.|+++||+|||+.+ ++|||++|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999888876643 234899999999999999999999986 999999999999999999999999998765432
Q ss_pred cccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh--h
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR--H 901 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~--~ 901 (983)
.. ......++..|+|||+..+ ..++.++||||||+++|||++|+.||..... .......... .
T Consensus 154 ~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~~ 219 (286)
T cd07846 154 GE-------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-IDQLYHIIKCLGN 219 (286)
T ss_pred cc-------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHHHhCC
Confidence 11 1112458899999999875 4578899999999999999999998853210 0001111100 0
Q ss_pred CCCCCcHHHHH--HHhhcCCC--CCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 902 YPHRLDPIVEK--AIAKYAPQ--HMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 902 ~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.........+. ........ .........+...+..+.+++.+|++.+|++||++++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 220 LIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred CchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000000000 00000000 00000001122356779999999999999999999999874
No 306
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=7e-33 Score=297.87 Aligned_cols=249 Identities=28% Similarity=0.420 Sum_probs=199.5
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC----cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT----GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
+|+..+.||+|+||.||+|... +++.||+|.+..... ++..+.+.+|+++++.++|+||+++++++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999976 789999999865432 23456789999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
+||+++++|.+++... ..+++..+..++.|+++|++|||+.+ ++|+||+|+||+++.++.+||+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKKY----GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 9999999999988642 35889999999999999999999986 9999999999999999999999999987654
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCC-CCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR-ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
... ......|+..|+|||...... ++.++|+||||+++|+|++|+.||.... .....
T Consensus 154 ~~~--------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~----~~~~~---- 211 (258)
T cd06632 154 EFS--------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE----GVAAV---- 211 (258)
T ss_pred ccc--------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc----HHHHH----
Confidence 221 112245889999999987766 8899999999999999999999986421 10000
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
. . ..... ..+. .......++.+++.+|+..+|.+||++++++++
T Consensus 212 --------~-~-~~~~~--~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 212 --------F-K-IGRSK--ELPP----IPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred --------H-H-HHhcc--cCCC----cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 0 0 00000 0000 011245678899999999999999999999864
No 307
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=8.8e-33 Score=306.76 Aligned_cols=280 Identities=19% Similarity=0.248 Sum_probs=198.2
Q ss_pred CCCCCCccccCCcEeEEEEEEC---CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecC--Ccee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ---DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKP--DFKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 740 (983)
+|...+.||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4777889999999999999965 47889999987633 122356788899999999999999999999888 7899
Q ss_pred EEEecccCcccccccccccCc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC----CCCEEEccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGL-SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE----DLTALVADF 815 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~----~~~~kl~Df 815 (983)
+||||+++ ++.+++...... ...+++..++.++.|++.|++|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 565555432221 236899999999999999999999996 999999999999999 999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCC--
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGS-- 892 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~-- 892 (983)
|+++........ ........+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||.....+..
T Consensus 157 g~~~~~~~~~~~----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 226 (316)
T cd07842 157 GLARLFNAPLKP----------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKS 226 (316)
T ss_pred ccccccCCCccc----------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccccccc
Confidence 999866432211 011223468899999998776 4578999999999999999999999975432210
Q ss_pred ------chHHHHHhhCCCCCc--H------HHHHHHhhcCCCCCc--ccccc--chHHHHHHHHHHHhhhcCCCCCCCCC
Q 042568 893 ------SLHEWVKRHYPHRLD--P------IVEKAIAKYAPQHMP--IYYNK--VWSDVVLELIELGLLCTQYNPSTRPS 954 (983)
Q Consensus 893 ------~l~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs 954 (983)
.+..++...-..... . ..............+ ..... .+.....++.+++.+|++.||++|||
T Consensus 227 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps 306 (316)
T cd07842 227 NPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRIT 306 (316)
T ss_pred chhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcC
Confidence 111111111000000 0 000000000000000 00000 00123457899999999999999999
Q ss_pred HHHHHHH
Q 042568 955 MLDVAHE 961 (983)
Q Consensus 955 ~~evl~~ 961 (983)
+.|++++
T Consensus 307 ~~eil~~ 313 (316)
T cd07842 307 AEEALEH 313 (316)
T ss_pred HHHHhcC
Confidence 9999864
No 308
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.7e-33 Score=304.98 Aligned_cols=274 Identities=22% Similarity=0.264 Sum_probs=196.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcC-CCCccceeeEEecCCc-----
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIR-HRNLIRIITICSKPDF----- 738 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 738 (983)
++|+..+.||+|+||.||+|... +++.||||.++..... .....+.+|+++++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999965 6889999988654332 23467888999999995 6999999999876665
Q ss_pred eeEEEecccCcccccccccccCc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC-CCCEEEcccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHGL-SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE-DLTALVADFG 816 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~-~~~~kl~Dfg 816 (983)
.++||||+++ ++.+++...... ...+++..++.++.||++||.|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 788877644322 346899999999999999999999996 999999999999998 8999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
+++....... ......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||... ....
T Consensus 157 ~~~~~~~~~~-------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~----~~~~ 219 (295)
T cd07837 157 LGRAFSIPVK-------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGD----SELQ 219 (295)
T ss_pred cceecCCCcc-------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCC----CHHH
Confidence 9875532111 0111256889999998765 45789999999999999999999998532 1111
Q ss_pred HHHH---hh-CCCC--CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 896 EWVK---RH-YPHR--LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 896 ~~~~---~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.... .. .+.. .............+...+............++.+++.+|+.++|++||+++|++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 220 QLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred HHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 1111 00 0000 00000000000000000000011112356778999999999999999999999864
No 309
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.1e-32 Score=295.24 Aligned_cols=253 Identities=26% Similarity=0.403 Sum_probs=205.9
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|...+.||+|++|.||+|... +++.||||++...........+.+|++++++++|+|++++++++......++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999976 58999999987665434567899999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHH-HSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
+++++|.+++... ..+++..++.++.|+++|++|||+ .+ ++||||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999998743 568999999999999999999999 85 999999999999999999999999998866432
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
... .....++..|+|||...+..++.++||||||+++|+|++|+.||..... ....+
T Consensus 154 ~~~-------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~-------- 210 (264)
T cd06623 154 LDQ-------------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFE-------- 210 (264)
T ss_pred CCc-------------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHH--------
Confidence 211 1134688999999999998999999999999999999999999864321 01111
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHH-HHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSD-VVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...... .......+ .. .+..+.+++.+|+..+|++||++.|++++
T Consensus 211 ----~~~~~~-~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 211 ----LMQAIC-DGPPPSLP-------AEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ----HHHHHh-cCCCCCCC-------cccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111111 11110011 11 45689999999999999999999999975
No 310
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.2e-33 Score=302.73 Aligned_cols=246 Identities=28% Similarity=0.324 Sum_probs=199.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|+..+.||+|+||.||+|... +++.||+|++..... .+..+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36788899999999999999965 588999999865432 224567889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++... ..+++..+..++.|+++||.|||+.+ |+||||+|+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRKS----GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 999999999988653 45889999999999999999999986 99999999999999999999999999876542
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
. .....|++.|+|||.+.+...+.++||||||+++|+|++|+.||.... ..
T Consensus 154 ~----------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~-------- 204 (290)
T cd05580 154 R----------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PI-------- 204 (290)
T ss_pred C----------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HH--------
Confidence 1 112468899999999988888999999999999999999999985321 00
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
......... ....+ ......+.+++.+|+..+|.+|| +++|++++
T Consensus 205 ----~~~~~~~~~--~~~~~-------~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 205 ----QIYEKILEG--KVRFP-------SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ----HHHHHHhcC--CccCC-------ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 011111100 00111 11246788999999999999999 77888754
No 311
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.5e-32 Score=302.16 Aligned_cols=272 Identities=20% Similarity=0.272 Sum_probs=199.5
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc----chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG----EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
+|...+.||+|+||.||+|... +++.||||.+...... .....+..|++++++++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999965 6889999998655432 2345677899999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+ +++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+++...
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 889999886432 36899999999999999999999996 9999999999999999999999999998664
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
..... .....+++.|+|||.+.+ ..++.++|||||||++|||++|..||.... +...+..... .
T Consensus 154 ~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~-~~~~~~~~~~-~ 218 (298)
T cd07841 154 SPNRK-------------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS-DIDQLGKIFE-A 218 (298)
T ss_pred CCCcc-------------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc-cHHHHHHHHH-H
Confidence 32111 111246788999998865 457899999999999999999977765321 1111111111 1
Q ss_pred CCCCCcHHHHH--HHhhcC--CCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 902 YPHRLDPIVEK--AIAKYA--PQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 902 ~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
........... ...... ....+......+.....++.+++.+|++.+|++|||++|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 219 LGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 10000000000 000000 0000000111123346788999999999999999999999985
No 312
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.8e-32 Score=302.60 Aligned_cols=250 Identities=27% Similarity=0.347 Sum_probs=195.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
.+|...+.||+|+||.||+|... +++.||+|.+..... .+...++.+|+++++.++|||++++.+++...+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45778899999999999999965 688999999864322 233467889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||++ |++.+.+... ...+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9997 4666655432 245899999999999999999999986 99999999999999999999999999875432
Q ss_pred CcccccccCCCCccccccCccccccccccccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM---GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
. ....|+..|+|||.+. ...++.++||||||+++|||++|+.||..... .....
T Consensus 168 ~-----------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-----~~~~~- 224 (307)
T cd06607 168 A-----------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALY- 224 (307)
T ss_pred C-----------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-----HHHHH-
Confidence 1 1235788999999874 35678999999999999999999999853210 00000
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
. +.. ...+.... .....++.+++.+||..+|++||++.+++++..-
T Consensus 225 -----------~-~~~---~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 270 (307)
T cd06607 225 -----------H-IAQ---NDSPTLSS---NDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV 270 (307)
T ss_pred -----------H-Hhc---CCCCCCCc---hhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 0 000 00011111 2245678999999999999999999999986543
No 313
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.7e-32 Score=299.52 Aligned_cols=273 Identities=23% Similarity=0.324 Sum_probs=200.9
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
+|+..+.||+|++|.||+|+.. +|+.||||.++........+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4778899999999999999975 688899999876654444567888999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++ ++.+++..... ...+++..+..++.|+++||+|||+.+ ++||||||+||++++++.++++|||+++.......
T Consensus 81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred Cc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 85 88877754332 346899999999999999999999986 99999999999999999999999999975532111
Q ss_pred cccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
......+|..|+|||+..+. .++.++||||+|+++|+|++|+.||...... ..............
T Consensus 156 -------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~ 221 (284)
T cd07836 156 -------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPT 221 (284)
T ss_pred -------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCC
Confidence 11123578899999987664 5688999999999999999999998643211 11111111110000
Q ss_pred CcHHHHHHHhhcC--CCCCccc----cccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYA--PQHMPIY----YNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...... +.... ....+.. .....+....++.+++.+|++.||++||+++|++++
T Consensus 222 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 222 -ESTWPG-ISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred -hhhHHH-HhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 00000 0000000 000112345678999999999999999999999864
No 314
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=6.7e-33 Score=297.85 Aligned_cols=251 Identities=22% Similarity=0.355 Sum_probs=199.9
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|...+.||+|+||.||+|... ++..||+|.+..... ....+.+.+|++++++++|+||+++++++......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4777899999999999999965 578899999865432 22356788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC-CEEEccccccccccCC
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL-TALVADFGIAKLVKGI 824 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~-~~kl~Dfgla~~~~~~ 824 (983)
+++++|.+++.... ...+++..+..++.|+++|++|||+.+ ++|+||||+||++++++ .++++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQR--GVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 99999999887533 345799999999999999999999986 99999999999999885 4699999999765432
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
... .....|++.|+|||+..+..++.++||||||++++||++|+.||... ...+++.....
T Consensus 156 ~~~-------------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~- 216 (257)
T cd08225 156 MEL-------------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-----NLHQLVLKICQ- 216 (257)
T ss_pred ccc-------------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHhc-
Confidence 111 11235889999999998888999999999999999999999998532 11222221111
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..... . ......++.+++.+|+..+|++|||+.|++++
T Consensus 217 -----------~~~~~-~-------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 217 -----------GYFAP-I-------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred -----------ccCCC-C-------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00000 0 01234578899999999999999999999875
No 315
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.1e-33 Score=281.83 Aligned_cols=284 Identities=22% Similarity=0.274 Sum_probs=202.7
Q ss_pred CCCCCCCccccCCcEeEEEEEECC--C---cEEEEEEeecccCcc-hhHHHHHHHHHHHhcCCCCccceeeEEec-CCce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD--N---TRIAVKVLDLTTTGE-ITGSFKRECQILKRIRHRNLIRIITICSK-PDFK 739 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~--~---~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 739 (983)
..|+....||+|+||.||||+-.+ + ..+|+|.++.+..+. ......+|+..++.++|||++.+..++-. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 357788999999999999996432 2 258999997765443 34678899999999999999999998866 6788
Q ss_pred eEEEecccCcccccccccccC-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC----CCEEEcc
Q 042568 740 ALVLPLMSNGSLENHLYPSHG-LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED----LTALVAD 814 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~----~~~kl~D 814 (983)
++++||.+. +|...++-++. ..+.++...+..|.+||+.|+.|||++. |+|||+||.|||+..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeec
Confidence 999999997 67666654332 2357899999999999999999999997 9999999999999877 9999999
Q ss_pred ccccccccCCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCC---
Q 042568 815 FGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHD--- 890 (983)
Q Consensus 815 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~--- 890 (983)
||+|+.+...-... .....++-|..|+|||.+.|. .||++.|||+.|||+.||+|-++-|.....+
T Consensus 180 lGlaR~~~~plkpl----------~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~ 249 (438)
T KOG0666|consen 180 LGLARLFNNPLKPL----------ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKT 249 (438)
T ss_pred ccHHHHhhcccccc----------ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhccc
Confidence 99999886543221 223446789999999999984 6899999999999999999998887543211
Q ss_pred CCc-----hHHHHHh-hCCCC-Cc----------HHHHHHHhhcCCC-CCccccccchHHHHHHHHHHHhhhcCCCCCCC
Q 042568 891 GSS-----LHEWVKR-HYPHR-LD----------PIVEKAIAKYAPQ-HMPIYYNKVWSDVVLELIELGLLCTQYNPSTR 952 (983)
Q Consensus 891 ~~~-----l~~~~~~-~~~~~-~~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 952 (983)
... +..+.+- ..|.. .. ..+........+. .++.++.+ +..-.....+|+..++.+||.+|
T Consensus 250 ~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~-~k~k~~~a~~LL~klL~yDP~kR 328 (438)
T KOG0666|consen 250 KNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHK-HKVKDPSALDLLQKLLTYDPIKR 328 (438)
T ss_pred CCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHH-hcCCCchHHHHHHHHhccCchhh
Confidence 100 1111110 00110 00 0011111111111 11111111 11112337899999999999999
Q ss_pred CCHHHHHHHHHHh
Q 042568 953 PSMLDVAHEMGRL 965 (983)
Q Consensus 953 Ps~~evl~~L~~~ 965 (983)
.|+++.+++.=.-
T Consensus 329 Ita~qAleh~yF~ 341 (438)
T KOG0666|consen 329 ITAEQALEHPYFT 341 (438)
T ss_pred ccHHHHhcccccc
Confidence 9999999876433
No 316
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-33 Score=305.38 Aligned_cols=252 Identities=27% Similarity=0.398 Sum_probs=207.9
Q ss_pred HhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcc-hhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGE-ITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
..+.|.+...||+|.|+.|..|++ .++..||||.+++..-.. ....+.+|+++|+.++|||||+++.+...+...|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 346788899999999999999995 478999999998765332 345689999999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+.+|.+.+++.... .+.+..+..++.|+.+|++|+|+++ |||||||++|||+++++.+||+|||++.++.
T Consensus 134 ~eya~~ge~~~yl~~~g----r~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG----RMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEeccCchhHHHHHhcc----cchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeec
Confidence 99999999999998653 3555888999999999999999996 9999999999999999999999999999876
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRA-STHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
.. ...++.+|++.|.|||++.+..| ++++|+||+|+++|-|+.|..||+.- .+..
T Consensus 207 ~~--------------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~-----~lk~----- 262 (596)
T KOG0586|consen 207 YG--------------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ-----NLKE----- 262 (596)
T ss_pred cc--------------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc-----cccc-----
Confidence 32 23355789999999999999766 68999999999999999999999742 1111
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.-++.+.... ..+.+ ...++.+++.+++..+|.+|++++++.++-+
T Consensus 263 -------Lr~rvl~gk~--rIp~~-------ms~dce~lLrk~lvl~Pskr~~~dqim~~~W 308 (596)
T KOG0586|consen 263 -------LRPRVLRGKY--RIPFY-------MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRW 308 (596)
T ss_pred -------ccchheeeee--cccce-------eechhHHHHHHhhccCccccCCHHHhhhhcc
Confidence 1111111111 11211 3467889999999999999999999998655
No 317
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.8e-32 Score=297.47 Aligned_cols=248 Identities=22% Similarity=0.310 Sum_probs=196.9
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
|...+.||+|++|.||+|... +++.||+|.++.... ...+.+.+|+.+++.++|||++++++++...+..++|+||++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 344578999999999999954 688899998864432 234668899999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+++|.+++.. .++++..+..++.|++.|++|||+.+ ++||||+|+||+++.++.++++|||.+.......
T Consensus 100 ~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-- 169 (285)
T cd06648 100 GGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-- 169 (285)
T ss_pred CCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC--
Confidence 9999998864 35889999999999999999999996 9999999999999999999999999887543211
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
.......|++.|+|||...+..++.++||||||+++|||++|+.||.... . ...
T Consensus 170 -----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~----~-~~~---------- 223 (285)
T cd06648 170 -----------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP----P-LQA---------- 223 (285)
T ss_pred -----------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC----H-HHH----------
Confidence 01122458899999999998889999999999999999999999985311 0 011
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
... +........+. .......+.+++.+|++.+|++||++++++++
T Consensus 224 --~~~-~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 224 --MKR-IRDNLPPKLKN-----LHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred --HHH-HHhcCCCCCcc-----cccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 111 11111100000 01244679999999999999999999999974
No 318
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.7e-32 Score=302.53 Aligned_cols=266 Identities=20% Similarity=0.217 Sum_probs=198.1
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|...+.||+|+||.||++... +++.||+|.+..... ......+.+|+++++.++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999965 578899999865432 223467889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++... ..+++..+..++.|+++|++|||+.+ ++||||||+||+++.++.++++|||+++....
T Consensus 81 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKNI----GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 999999999998642 35899999999999999999999986 99999999999999999999999999874221
Q ss_pred CcccccccC--CCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 824 IDESVNCAN--DSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 824 ~~~~~~~~~--~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
......... .............|+..|+|||++.+..++.++||||||+++|||++|+.||... ...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~-----~~~~----- 223 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-----TPEE----- 223 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHH-----
Confidence 110000000 0000001112245788999999998888999999999999999999999998531 1111
Q ss_pred CCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 902 YPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
............ +.. ....+.++.+++.+|++.+|++||++.++.+.+
T Consensus 224 -------~~~~~~~~~~~~--~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 224 -------LFGQVISDDIEW--PEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred -------HHHHHHhcccCC--CCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 111111111000 000 012456789999999999999999854444433
No 319
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.8e-32 Score=297.94 Aligned_cols=254 Identities=24% Similarity=0.335 Sum_probs=203.5
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
.++.|...+.||+|++|.||+|..+ +++.||+|+++.... ..+.+.+|++++++++|+|++++++++...+..++|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566778889999999999999976 688899999975543 4577889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||.+.....
T Consensus 95 e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 95 EYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred eccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 9999999999987532 36899999999999999999999986 99999999999999999999999999875542
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ....
T Consensus 169 ~~~-------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~----~~~~------- 224 (286)
T cd06614 169 EKS-------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP----PLRA------- 224 (286)
T ss_pred chh-------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC----HHHH-------
Confidence 211 1112357889999999998889999999999999999999999985311 1000
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
... +........+ .....+.++.+++.+|++.+|.+||++.+++++-
T Consensus 225 ------~~~-~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 271 (286)
T cd06614 225 ------LFL-ITTKGIPPLK-----NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP 271 (286)
T ss_pred ------HHH-HHhcCCCCCc-----chhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence 000 0000000000 0122456788999999999999999999998743
No 320
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-33 Score=279.49 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=202.5
Q ss_pred hCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
.++|...+++|+|.||.|-.++- .+++.+|+|+++++. ..+..+.-..|-++++..+||.+..+-..|+..+..++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 35688899999999999999994 478889999997764 233456667799999999999999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||..||.|.-++.. .+.+++...+-+-..|+.||.|||+++ ||.||+|.+|+|+|++|++||+|||+++.-.
T Consensus 247 MeyanGGeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLSR----ERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEccCceEeeehhh----hhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcc
Confidence 999999999988875 345788888889999999999999985 9999999999999999999999999998432
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.+...+.+.+|||.|+|||++....|+..+|.|.+||++|||++|+.||..-.+ ..+.+.+.
T Consensus 320 -------------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--~kLFeLIl--- 381 (516)
T KOG0690|consen 320 -------------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--EKLFELIL--- 381 (516)
T ss_pred -------------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch--hHHHHHHH---
Confidence 223456678999999999999999999999999999999999999999964322 11222111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
... -+.| .....+...|+...+..||.+|. .++||.++
T Consensus 382 ------------~ed--~kFP-------r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 382 ------------MED--LKFP-------RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ------------hhh--ccCC-------ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 110 0111 12456788888999999999995 45566543
No 321
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=273.43 Aligned_cols=248 Identities=23% Similarity=0.301 Sum_probs=195.1
Q ss_pred CCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEEecccCc
Q 042568 672 SSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
...||.|+.|.|++++.+ +|..+|||.+......+..+++...+.++..-+ .|.||+.+|||......++.||.|.-
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~- 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST- 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-
Confidence 567999999999999965 578899999988777777788888888877664 89999999999999999999999852
Q ss_pred ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccc
Q 042568 750 SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVN 829 (983)
Q Consensus 750 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~ 829 (983)
..+.++... ..++++..+-++...+.+||.||.+++ .|+|||+||+|||+|+.|.+|+||||++.++.+...+
T Consensus 176 C~ekLlkri---k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh-- 248 (391)
T KOG0983|consen 176 CAEKLLKRI---KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH-- 248 (391)
T ss_pred HHHHHHHHh---cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccc--
Confidence 455555433 456888888899999999999999877 6999999999999999999999999999887654433
Q ss_pred ccCCCCccccccCccccccccccccccCC---CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 830 CANDSMSFTSTDGLLCGSVGYIAPEYGMG---KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
...+|-+.|||||.+.- ..|+-++||||||++++|+.||+.||..-..+-.
T Consensus 249 ------------trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe-------------- 302 (391)
T KOG0983|consen 249 ------------TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE-------------- 302 (391)
T ss_pred ------------ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH--------------
Confidence 22468899999999875 4688999999999999999999999864211111
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+..+.+.. .+..++... ..+..+.+++..|+..|+.+||...+++++
T Consensus 303 --~ltkvln~-ePP~L~~~~-----gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 303 --VLTKVLNE-EPPLLPGHM-----GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred --HHHHHHhc-CCCCCCccc-----CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11111111 112222111 134678888888999999999999999875
No 322
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.1e-32 Score=301.93 Aligned_cols=254 Identities=24% Similarity=0.329 Sum_probs=197.8
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
|...+.||+|+||.||+|+.. ++..||+|.+.... ..+...++.+|++++++++|||++++++++...+..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 555778999999999999964 68889999986542 223456788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+.+ ++.+.+... ...+++..+..++.|++.|+.|||+.+ |+||||+|+||+++.++.++|+|||++......
T Consensus 107 ~~g-~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 107 CLG-SASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CCC-CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 974 776666432 345899999999999999999999996 999999999999999999999999998754321
Q ss_pred ccccccCCCCccccccCccccccccccccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM---GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
....|++.|+|||++. +..++.++|||||||++|||++|+.||.... ..
T Consensus 179 ----------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~----~~-------- 230 (317)
T cd06635 179 ----------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----AM-------- 230 (317)
T ss_pred ----------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc----HH--------
Confidence 1235888999999874 4568899999999999999999999985321 00
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhcC
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYLS 970 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 970 (983)
............ ... .......+.+++.+|++.+|.+||++.+++++.........
T Consensus 231 -----~~~~~~~~~~~~----~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 286 (317)
T cd06635 231 -----SALYHIAQNESP----TLQ---SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE 286 (317)
T ss_pred -----HHHHHHHhccCC----CCC---CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence 001111111000 000 11244678999999999999999999999998765544433
No 323
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-32 Score=301.53 Aligned_cols=273 Identities=20% Similarity=0.309 Sum_probs=200.7
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
++|+..+.||+|+||.||+|... +++.||||.++.... ......+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888899999999999999965 578899999865432 3345789999999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|++++.+..+... ...+++..+..++.|+++|++|||+.+ ++|||++|+||++++++.++|+|||.+......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 9998777665532 345899999999999999999999996 999999999999999999999999999876532
Q ss_pred cccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. .......++..|+|||++.+. .++.++||||||+++|+|++|+.||...... ..+.. ......
T Consensus 154 ~~------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~-~~~~~~ 219 (288)
T cd07833 154 PA------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI-DQLYL-IQKCLG 219 (288)
T ss_pred cc------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH-HHHHhC
Confidence 21 011224678899999999887 8899999999999999999999998632110 00000 000000
Q ss_pred CCCcHHHHHHH------hh--cCCCCCccccccch-HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HRLDPIVEKAI------AK--YAPQHMPIYYNKVW-SDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~------~~--~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...+...... .. ......+......+ ..++.++.+++.+|+..+|++||++++++++
T Consensus 220 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 220 -PLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred -CCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0000000000 00 00000000000000 1236789999999999999999999999864
No 324
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.5e-32 Score=299.77 Aligned_cols=272 Identities=25% Similarity=0.316 Sum_probs=197.8
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
|+..+.||+|++|.||+|... +|+.||+|++...... .....+.+|++++++++|||++++++++...+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999964 7899999998655422 23467889999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
+ ++|.+++.... ...+++..+..++.|+++||+|||+.+ ++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~-~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 68988886533 246899999999999999999999985 99999999999999999999999999975532111
Q ss_pred cccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
......++..|+|||++.+. .++.++||||||+++|+|++|+.||..... ...+...........
T Consensus 155 -------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~ 220 (283)
T cd07835 155 -------------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-IDQLFRIFRTLGTPD 220 (283)
T ss_pred -------------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCC
Confidence 01112468899999987664 568899999999999999999999853211 111111111111000
Q ss_pred CcHHHH-----HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVE-----KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..... .......+................++.+++.+|++.+|++||+++|++++
T Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 221 -EDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred -hHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000 00000000000000011112244678899999999999999999999864
No 325
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.2e-32 Score=293.64 Aligned_cols=251 Identities=24% Similarity=0.300 Sum_probs=203.4
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|+..+.||+|+||.||+++.. +++.+|+|.+.... .......+.+|++++++++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999854 67889999986543 223456788999999999999999999999988999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.........+++..++.++.|+++|++|||+.+ ++|+||+|+||+++.++.+|++|||+++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 9999999988764433467899999999999999999999996 9999999999999999999999999998765321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.....|+..|+|||...+..++.++|+||+|+++|||++|+.||.... ...
T Consensus 158 ---------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-----~~~--------- 208 (256)
T cd08530 158 ---------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS-----MQD--------- 208 (256)
T ss_pred ---------------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHH---------
Confidence 111357889999999999889999999999999999999999986421 000
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
....+........ ......++.+++.+|+..+|++||++.|++++
T Consensus 209 ----~~~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 209 ----LRYKVQRGKYPPI-------PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ----HHHHHhcCCCCCC-------chhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1111111110001 12355779999999999999999999999875
No 326
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8e-33 Score=323.46 Aligned_cols=279 Identities=18% Similarity=0.209 Sum_probs=189.4
Q ss_pred HhCCCCCCCccccCCcEeEEEEEECC--CcEEEEEEee--------------c--ccCcchhHHHHHHHHHHHhcCCCCc
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQD--NTRIAVKVLD--------------L--TTTGEITGSFKRECQILKRIRHRNL 726 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~~--~~~vAvK~~~--------------~--~~~~~~~~~~~~E~~~l~~l~h~ni 726 (983)
..++|.+.+.||+|+||+||++..+. +..+++|.+. + ........++.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34689999999999999999987542 2222222110 0 0111234568899999999999999
Q ss_pred cceeeEEecCCceeEEEecccCcccccccccccC-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeC
Q 042568 727 IRIITICSKPDFKALVLPLMSNGSLENHLYPSHG-LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLD 805 (983)
Q Consensus 727 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~ 805 (983)
+++++++...+..++|+|++.+ ++.+++..... .........+..|+.|++.||+|||+++ |+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence 9999999999999999999864 66665543221 1222345677889999999999999986 99999999999999
Q ss_pred CCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCC-
Q 042568 806 EDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPT- 884 (983)
Q Consensus 806 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~- 884 (983)
.++.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||++|||++|+.++
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREA------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred CCCCEEEEeCCCceecCccccc------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence 9999999999999876432211 112247999999999999999999999999999999999988643
Q ss_pred CcccCC-CCchHHHHHhh------CCCCCcHHHHHHHhhc---CCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC
Q 042568 885 DVLFHD-GSSLHEWVKRH------YPHRLDPIVEKAIAKY---APQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS 954 (983)
Q Consensus 885 ~~~~~~-~~~l~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 954 (983)
...... ...+.+.+... ++.......+...... .....+..... ......+.+++.+|+++||++|||
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~kmL~~DP~~Rps 447 (501)
T PHA03210 370 GDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRN--LGLPADFEYPLVKMLTFDWHLRPG 447 (501)
T ss_pred cCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHh--cCCChHHHHHHHHHhccCcccCcC
Confidence 221111 11122222110 1111011111100000 00000100000 112345778899999999999999
Q ss_pred HHHHHHH
Q 042568 955 MLDVAHE 961 (983)
Q Consensus 955 ~~evl~~ 961 (983)
+.|++++
T Consensus 448 a~elL~h 454 (501)
T PHA03210 448 AAELLAL 454 (501)
T ss_pred HHHHhhC
Confidence 9999975
No 327
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.6e-32 Score=304.11 Aligned_cols=279 Identities=21% Similarity=0.275 Sum_probs=196.5
Q ss_pred CccccC--CcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSG--RFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G--~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
..||+| +||+||+|.+. +++.||||++..... .+..+.+.+|+.+++.++||||+++++++...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 99999999964 789999999865432 23457889999999999999999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
+++.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99999887543 345899999999999999999999986 9999999999999999999999998765433211110
Q ss_pred cccCCCCccccccCccccccccccccccCCC--CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh-hCCC-
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGK--RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR-HYPH- 904 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~-~~~~- 904 (983)
.. .........++..|+|||++.+. .++.++||||+||++|||++|+.||........ ....... .+.+
T Consensus 159 ~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~ 231 (328)
T cd08226 159 KV------VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPL 231 (328)
T ss_pred cc------cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCc
Confidence 00 00111122456779999998763 478999999999999999999999864321110 1111000 0000
Q ss_pred -------CCcH-----------HHHHHHhhcCCCC--CccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 905 -------RLDP-----------IVEKAIAKYAPQH--MPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 905 -------~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.... +.+..+....... .+.............+.+++.+|++.||++|||++|++++-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 232 DITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred cccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 0000 0000000000000 000011112346678999999999999999999999997654
No 328
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.7e-32 Score=296.51 Aligned_cols=243 Identities=25% Similarity=0.297 Sum_probs=186.1
Q ss_pred ccccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHh---cCCCCccceeeEEecCCceeEEEeccc
Q 042568 674 LIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKR---IRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 674 ~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
+||+|+||.||++... +++.||+|.+...... .....+.+|..+++. .+|||++.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 6889999988654322 112334455544443 379999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++|||++.......
T Consensus 81 ~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999988764 345899999999999999999999996 9999999999999999999999999987543211
Q ss_pred ccccCCCCccccccCccccccccccccccC-CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGM-GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
.....||..|+|||... +..++.++||||+||++|||++|+.||...... ...
T Consensus 152 -------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~----------- 205 (279)
T cd05633 152 -------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKH----------- 205 (279)
T ss_pred -------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc--CHH-----------
Confidence 11235899999999886 456789999999999999999999998643211 100
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
.+...... ..... ......++.+++.+|++.||++|| +++|++++
T Consensus 206 --~~~~~~~~-~~~~~-------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 206 --EIDRMTLT-VNVEL-------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --HHHHHhhc-CCcCC-------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 11111100 00001 122456788999999999999999 69999886
No 329
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.7e-32 Score=296.50 Aligned_cols=268 Identities=20% Similarity=0.205 Sum_probs=194.6
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecC--CceeEEEe
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKP--DFKALVLP 744 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 744 (983)
|...+.||+|+||.||+|... +++.||+|.++............+|+.+++++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 556788999999999999954 688899999865433323344557899999885 99999999999877 88999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|++ +++.+++... ...+++..++.++.|+++||+|||+.+ ++||||||+||+++. +.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMD-MNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCC-ccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 997 4777776542 246899999999999999999999996 999999999999999 99999999999865422
Q ss_pred cccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.. .....++..|+|||+..+ ..++.++||||+||++|||++|+.||.... .............
T Consensus 153 ~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~--~~~~~~~~~~~~~ 216 (282)
T cd07831 153 PP--------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN--ELDQIAKIHDVLG 216 (282)
T ss_pred CC--------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC--HHHHHHHHHHHcC
Confidence 11 112357889999997654 557889999999999999999999985421 1111122222111
Q ss_pred CCCcHHHHHHHhhcCCCC--Ccc----ccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQH--MPI----YYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...... ........... .+. .........+.++.+++.+|++.+|++||++++++++
T Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 217 TPDAEV-LKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred CCCHHH-HHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 111111 11111100000 000 0000112356889999999999999999999999875
No 330
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.9e-32 Score=299.00 Aligned_cols=273 Identities=21% Similarity=0.232 Sum_probs=197.6
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecC--CceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKP--DFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 742 (983)
++|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46778899999999999999975 5788999998755432 2344678899999999999999999998777 889999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
+||+++ +|.+++... ...+++..++.++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 85 ~e~~~~-~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999974 888877643 236899999999999999999999996 9999999999999999999999999998665
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
.... ......+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||..... ...+.... ..
T Consensus 158 ~~~~-------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~-~~~~~~~~-~~ 222 (293)
T cd07843 158 SPLK-------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE-IDQLNKIF-KL 222 (293)
T ss_pred CCcc-------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHH-HH
Confidence 3211 11123578899999988764 468899999999999999999999864211 11111111 11
Q ss_pred CCCCCcHHHHHH--HhhcC----CCCCccccccchHH--HHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 902 YPHRLDPIVEKA--IAKYA----PQHMPIYYNKVWSD--VVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 902 ~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~--~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
............ +.... ...........+.. ....+.+++.+|++.+|++|||++|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 223 LGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 110000000000 00000 00000000001111 25678899999999999999999999864
No 331
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=280.58 Aligned_cols=264 Identities=23% Similarity=0.269 Sum_probs=200.4
Q ss_pred CCCCCHHHHHHHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceee
Q 042568 654 NPRVSYKQLIEATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIIT 731 (983)
Q Consensus 654 ~~~~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 731 (983)
...|+-++++. +..||.|+||+|+|-.++ .|+..|||++..........++..|.+...+- +.||||++||
T Consensus 58 ~~~F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG 130 (361)
T KOG1006|consen 58 LHTFTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG 130 (361)
T ss_pred ccccccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence 34555556654 467999999999999965 68889999998877766778899999976655 7899999999
Q ss_pred EEecCCceeEEEecccCcccccccccccC-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCE
Q 042568 732 ICSKPDFKALVLPLMSNGSLENHLYPSHG-LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTA 810 (983)
Q Consensus 732 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~ 810 (983)
.+-.++..++.||.|+ .|++.+...... ....+++.-.-+|....+.||.||-+.. +|||||+||+|||+|..|.+
T Consensus 131 a~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~v 207 (361)
T KOG1006|consen 131 ALFSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDV 207 (361)
T ss_pred hhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCE
Confidence 9999999999999996 477654332211 1456888888999999999999998775 79999999999999999999
Q ss_pred EEccccccccccCCcccccccCCCCccccccCccccccccccccccCC--CCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 042568 811 LVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG--KRASTHGDVYSFGVLLLEIVTGRRPTDVLF 888 (983)
Q Consensus 811 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~SlG~il~elltg~~p~~~~~ 888 (983)
|+||||++..+.+.- ....-+|-..|||||.+.. ..|+-++||||+|+++||+.||+.||....
T Consensus 208 KLCDFGIcGqLv~Si--------------AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~ 273 (361)
T KOG1006|consen 208 KLCDFGICGQLVDSI--------------AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD 273 (361)
T ss_pred eeecccchHhHHHHH--------------HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH
Confidence 999999997664321 1122368889999999875 458999999999999999999999986421
Q ss_pred CCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccc-cccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 889 HDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIY-YNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 889 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.++++...-. ....|.. .....-+....+.+++.-|+..|-..||...++.++
T Consensus 274 -------------------svfeql~~Vv-~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 274 -------------------SVFEQLCQVV-IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred -------------------HHHHHHHHHH-cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 1222221111 1111111 111112355678888889999999999999998753
No 332
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-33 Score=302.18 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=202.2
Q ss_pred CCccccCCcEeEEEEEEC--CCcE--EEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 672 SSLIGSGRFGHVYKGVLQ--DNTR--IAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~--~~~~--vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
.++||+|.||+|++|.|. .|+. ||||.+...........|.+|+.+|.+|+|||++++||+..+ .-..+|+|.++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 578999999999999986 3444 799999766555567899999999999999999999999987 55689999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
.|||.+.+++. .+..+-......++.|||.|+.||..++ .||||+-..|+++-....+||+|||+.+-++..++.
T Consensus 194 lGSLldrLrka--~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 194 LGSLLDRLRKA--KKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cchHHHHHhhc--cccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 99999999873 2567888899999999999999999985 999999999999999999999999999988866544
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
+. ......-.+.|-|||.+....++.++|||+|||++|||+| |..||-...+
T Consensus 269 Yv----------m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g----------------- 321 (1039)
T KOG0199|consen 269 YV----------MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG----------------- 321 (1039)
T ss_pred eE----------ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-----------------
Confidence 32 1111233467999999999999999999999999999999 7778743210
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
..+++. +.. ...++. .+.|+..+++++.+||..+|++||++..+.+.+
T Consensus 322 ~qIL~~-iD~--~erLpR-----Pk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 322 IQILKN-IDA--GERLPR-----PKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHHh-ccc--cccCCC-----CCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 111111 111 111111 235889999999999999999999999997544
No 333
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.1e-32 Score=299.66 Aligned_cols=264 Identities=18% Similarity=0.251 Sum_probs=183.1
Q ss_pred CCCCCCCccccCCcEeEEEEEECC----CcEEEEEEeecccCcchh----------HHHHHHHHHHHhcCCCCccceeeE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD----NTRIAVKVLDLTTTGEIT----------GSFKRECQILKRIRHRNLIRIITI 732 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~~~~~----------~~~~~E~~~l~~l~h~niv~l~~~ 732 (983)
++|.+.++||+|+||.||+|.+.+ +..+|+|+.......... .....+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578899999999999999999654 345677764333221101 112233344556689999999997
Q ss_pred EecCC----ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC
Q 042568 733 CSKPD----FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL 808 (983)
Q Consensus 733 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~ 808 (983)
+.... ..++++|++.. ++.+.+.. ....++..+..++.|+++||+|||+.+ |+||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCC
Confidence 65443 34677777643 44444432 123567888999999999999999986 99999999999999999
Q ss_pred CEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 042568 809 TALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLF 888 (983)
Q Consensus 809 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~ 888 (983)
.++|+|||+|+.+.......... ........||+.|+|||+..+..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~------~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYS------KEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred cEEEEEcCCceeeccCCcccccc------cccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999998765332211100 111223469999999999999999999999999999999999999997532
Q ss_pred CCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 889 HDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 889 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.... ....... +.+. ........ ...++.++.+++..|+..+|++||++.++++.+
T Consensus 238 ~~~~-~~~~~~~-------~~~~----~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 238 HNGN-LIHAAKC-------DFIK----RLHEGKIK------IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred cchH-HHHHhHH-------HHHH----Hhhhhhhc------cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 2111 1100000 0011 11100000 112457789999999999999999999999876
No 334
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.5e-32 Score=305.39 Aligned_cols=272 Identities=21% Similarity=0.231 Sum_probs=198.5
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecC------
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKP------ 736 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 736 (983)
..++|...+.||+|+||.||+|... +++.||+|.+.... ......++.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999954 78899999986542 223346778899999999999999999988543
Q ss_pred CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 737 DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 737 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
...++||||+.+ ++.+.+.. .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCc
Confidence 346999999964 77776642 2788899999999999999999996 9999999999999999999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~ 896 (983)
+++...... ......||..|+|||.+.+..++.++||||+||++|+|++|+.||..... ...+..
T Consensus 164 ~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~ 228 (353)
T cd07850 164 LARTAGTSF--------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNK 228 (353)
T ss_pred cceeCCCCC--------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHH
Confidence 998654211 11223588999999999999999999999999999999999999853211 011111
Q ss_pred HHHhhCCCC---CcHHHHHHHhhcCCCC----------------CccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHH
Q 042568 897 WVKRHYPHR---LDPIVEKAIAKYAPQH----------------MPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLD 957 (983)
Q Consensus 897 ~~~~~~~~~---~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 957 (983)
.+.. .... +....+.......... .+............++.+++.+|++.||++|||+.|
T Consensus 229 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 307 (353)
T cd07850 229 IIEQ-LGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDD 307 (353)
T ss_pred HHHh-cCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHH
Confidence 1111 1000 0011111111000000 000000001234567899999999999999999999
Q ss_pred HHHHH
Q 042568 958 VAHEM 962 (983)
Q Consensus 958 vl~~L 962 (983)
++++=
T Consensus 308 iL~~~ 312 (353)
T cd07850 308 ALQHP 312 (353)
T ss_pred HhcCh
Confidence 99764
No 335
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.2e-32 Score=306.34 Aligned_cols=274 Identities=20% Similarity=0.289 Sum_probs=197.2
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCC------
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPD------ 737 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 737 (983)
.++|...+.||+|+||.||+|... +++.||||.+..... ......+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 378989999999999999999964 689999999865432 223466889999999999999999999986542
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGI 817 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgl 817 (983)
..++|+||+.. ++..+. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCC
Confidence 45899999964 555443 235889999999999999999999996 99999999999999999999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHH
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~ 896 (983)
++..... .....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...+..
T Consensus 164 ~~~~~~~----------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-~~~~~~ 226 (342)
T cd07879 164 ARHADAE----------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQ 226 (342)
T ss_pred CcCCCCC----------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHH
Confidence 8754311 112467889999999876 4688999999999999999999999863210 001111
Q ss_pred HHHhhCCCCCcHHHHHHHh--------hcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH--HHHhH
Q 042568 897 WVKRHYPHRLDPIVEKAIA--------KYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE--MGRLK 966 (983)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~~ 966 (983)
.+. ..+... +...+.+. ...+...+......+.....++.+++.+|++.||++||+++|++++ ++.++
T Consensus 227 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 227 ILK-VTGVPG-PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHH-hcCCCC-HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 111 000000 00000000 0000000000011112244678899999999999999999999976 66665
Q ss_pred hh
Q 042568 967 QY 968 (983)
Q Consensus 967 ~~ 968 (983)
+.
T Consensus 305 ~~ 306 (342)
T cd07879 305 DA 306 (342)
T ss_pred cc
Confidence 43
No 336
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.8e-32 Score=299.94 Aligned_cols=277 Identities=21% Similarity=0.257 Sum_probs=194.8
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCc------
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDF------ 738 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 738 (983)
++|...+.||+|+||.||+|... +++.||||.+...... .....+.+|++++++++||||+++++++.....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 47888999999999999999965 6889999988654322 234456789999999999999999999866543
Q ss_pred --eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 739 --KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 739 --~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
.++||||+.+ ++.+.+... ...+++.+++.++.|+++||+|||+.+ ++|+||||+||+++.++.+||+|||
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCC
Confidence 4999999975 777766532 235899999999999999999999996 9999999999999999999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
++.......... ........++..|+|||...+. .++.++||||||+++|||++|+.||.... .....
T Consensus 165 ~~~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~--~~~~~ 233 (310)
T cd07865 165 LARAFSLSKNSK---------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT--EQHQL 233 (310)
T ss_pred CcccccCCcccC---------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC--HHHHH
Confidence 998664322110 0111224578899999987764 46889999999999999999999986421 11111
Q ss_pred HHHHhh---CCCCCcHHHHHH--Hhhc-CCCCCc-cccccc-hHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 896 EWVKRH---YPHRLDPIVEKA--IAKY-APQHMP-IYYNKV-WSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 896 ~~~~~~---~~~~~~~~~~~~--~~~~-~~~~~~-~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+... .+....+..+.. .... .+.... ...... .......+.+++.+|+..||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 234 TLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred HHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 111111 111100000000 0000 000000 000000 00023457899999999999999999999865
No 337
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-34 Score=277.33 Aligned_cols=278 Identities=20% Similarity=0.297 Sum_probs=198.1
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcc-hhHHHHHHHHHHHhcCCCCccceeeEEecC--------C
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGE-ITGSFKRECQILKRIRHRNLIRIITICSKP--------D 737 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~ 737 (983)
.|....+||+|.||.||+|+.. +|+.||+|+.-.+..++ ......+|+++++.++|+|++.++..|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 3445678999999999999955 57779998765544333 345678999999999999999999888432 2
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGI 817 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgl 817 (983)
..|+|+++|+. +|.-.+... ..+++..++.+++.++..||.|+|.. +|+|||+||.|+|++.++.+||+|||+
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~---~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNR---KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCc---cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccc
Confidence 46999999986 676666532 35689999999999999999999998 499999999999999999999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHH
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~ 896 (983)
|+.+...+.... ......+-|..|++||.+.| +.|+++.|||+.|||+.||+||.+-+....+ .....
T Consensus 171 ar~fs~~~n~~k---------prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte--qqql~ 239 (376)
T KOG0669|consen 171 ARAFSTSKNVVK---------PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE--QQQLH 239 (376)
T ss_pred ccceecccccCC---------CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH--HHHHH
Confidence 987765433211 11233467999999999988 5789999999999999999999987653211 11111
Q ss_pred HHHh---hCCCCCcHHHHHH--HhhcCCCCCccccccchHHHHH------HHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 897 WVKR---HYPHRLDPIVEKA--IAKYAPQHMPIYYNKVWSDVVL------ELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 897 ~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
.+.. .+.....+..+.. ...+.....+.-.....++..+ +..+++..++..||.+|+++++++.+--
T Consensus 240 ~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 240 LISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred HHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 1111 1111111111111 0001000011111111222333 6789999999999999999999997654
No 338
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.5e-32 Score=292.08 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=192.1
Q ss_pred HHHHHHhCCCCCCCcc--ccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEec
Q 042568 660 KQLIEATGGFCPSSLI--GSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSK 735 (983)
Q Consensus 660 ~~l~~~~~~f~~~~~i--G~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 735 (983)
.+.....++|.+.+.+ |+|+||.||++... ++..+|+|.+....... .|+.....+ +|||++++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEec
Confidence 3444455677777776 99999999999954 67889999986432221 122222223 69999999999999
Q ss_pred CCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC-CEEEcc
Q 042568 736 PDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL-TALVAD 814 (983)
Q Consensus 736 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~-~~kl~D 814 (983)
.+..++||||+++++|.+++... ..+++..+..++.|+++|+.|||+.+ ++||||||+||+++.++ .++|+|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE----GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEec
Confidence 99999999999999999998643 36899999999999999999999996 99999999999999998 999999
Q ss_pred ccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCch
Q 042568 815 FGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSL 894 (983)
Q Consensus 815 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l 894 (983)
||+++..... ....|+..|+|||++.+..++.++||||+|+++|||++|+.||..........
T Consensus 154 fg~~~~~~~~-----------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~ 216 (267)
T PHA03390 154 YGLCKIIGTP-----------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL 216 (267)
T ss_pred CccceecCCC-----------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH
Confidence 9998755321 11358899999999999889999999999999999999999987432221111
Q ss_pred HHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC-HHHHHHH
Q 042568 895 HEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS-MLDVAHE 961 (983)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~ 961 (983)
..+... . ....+ ........+.+++.+|++.+|.+||+ ++|++++
T Consensus 217 ~~~~~~-------------~----~~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 217 ESLLKR-------------Q----QKKLP-----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHHHh-------------h----cccCC-----cccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 111111 0 00000 01235577899999999999999996 6988864
No 339
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.98 E-value=4.7e-32 Score=299.67 Aligned_cols=276 Identities=20% Similarity=0.236 Sum_probs=198.1
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecC--CceeE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKP--DFKAL 741 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 741 (983)
.++|.+.+.||+|+||.||+|... +|+.||+|.++..... .....+.+|++++++++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 357888999999999999999965 6889999998654332 2234567899999999999999999998654 46799
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
||||+++ +|.+++... ...+++..+..++.|+++|++|||+.+ ++||||||+||+++.++.+||+|||.+...
T Consensus 86 v~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 777777543 246899999999999999999999996 999999999999999999999999999876
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
...... .....++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.... .......+..
T Consensus 159 ~~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~--~~~~~~~~~~ 223 (309)
T cd07845 159 GLPAKP-------------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS--EIEQLDLIIQ 223 (309)
T ss_pred CCccCC-------------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHH
Confidence 432111 111245788999999876 457899999999999999999999986321 1111111111
Q ss_pred hCCCCCcHHHHHH--HhhcCCCCCc----cccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 901 HYPHRLDPIVEKA--IAKYAPQHMP----IYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 901 ~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
............. .........+ ............++.+++.+|++.||++|||++|++++-.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~ 292 (309)
T cd07845 224 LLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY 292 (309)
T ss_pred hcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 1111000000000 0000000000 0000011123567889999999999999999999998644
No 340
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.98 E-value=3.5e-32 Score=301.54 Aligned_cols=279 Identities=21% Similarity=0.264 Sum_probs=196.1
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecc-cCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcc
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLT-TTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGS 750 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 750 (983)
.+.+|.|+++.||++.. +++.||||++... ...+..+.+.+|++++++++|+||+++++++...+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34455556666666555 6899999998765 334456789999999999999999999999999999999999999999
Q ss_pred cccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccc
Q 042568 751 LENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNC 830 (983)
Q Consensus 751 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~ 830 (983)
+.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++|||.+..+.........
T Consensus 86 l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 86 CEDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 999887543 345889999999999999999999996 999999999999999999999999998765432211000
Q ss_pred cCCCCccccccCccccccccccccccCC--CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc-
Q 042568 831 ANDSMSFTSTDGLLCGSVGYIAPEYGMG--KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD- 907 (983)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~- 907 (983)
.........++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ....+.+....+..+.
T Consensus 161 ------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 233 (314)
T cd08216 161 ------VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT-QMLLEKVRGTVPCLLDK 233 (314)
T ss_pred ------cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCcccccc
Confidence 0111233467889999999876 35789999999999999999999998643211 1111111111110000
Q ss_pred ---HHHHHHHhh----cCCCCCc-cccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 908 ---PIVEKAIAK----YAPQHMP-IYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 908 ---~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+........ ....... ............++.+++.+||..||++|||++|++++-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 234 STYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred CchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 000000000 0000000 0000011234567889999999999999999999998644
No 341
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.98 E-value=1.4e-31 Score=287.63 Aligned_cols=253 Identities=25% Similarity=0.361 Sum_probs=204.8
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|...+.||+|+||.||++... ++..||+|++..... .+....+.+|++++++++|||++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4777889999999999999965 688899999876543 24567789999999999999999999999988999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++.........+++..+..++.++++|++|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999988765333467999999999999999999999996 9999999999999999999999999998654321
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.......|++.|+|||...+..++.++||||+|+++++|++|+.||+... ..+.
T Consensus 158 -------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~-------- 211 (258)
T cd08215 158 -------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLEL-------- 211 (258)
T ss_pred -------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHH--------
Confidence 11123468899999999988889999999999999999999999985321 1111
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+....... ...+ .....++.+++.+|+..+|++||++.|++++
T Consensus 212 ----~~~~~~~~~-~~~~-------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 212 ----ALKILKGQY-PPIP-------SQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ----HHHHhcCCC-CCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111111 1111 1244678899999999999999999999864
No 342
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.98 E-value=4e-32 Score=303.45 Aligned_cols=279 Identities=23% Similarity=0.320 Sum_probs=201.6
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEec----CCce
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSK----PDFK 739 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 739 (983)
.++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 468888999999999999999954 689999999865432 2345678889999999999999999998753 3467
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++|+||+. ++|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccce
Confidence 99999996 588888764 334899999999999999999999986 9999999999999999999999999997
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
........ .........|+..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......+
T Consensus 156 ~~~~~~~~---------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~--~~~~~~~ 224 (334)
T cd07855 156 GLSSSPTE---------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY--VHQLKLI 224 (334)
T ss_pred eecccCcC---------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh--HHHHHHH
Confidence 65432211 0111223468999999998765 4688999999999999999999999864211 1111111
Q ss_pred HhhCC---CC-CcHHHHHHHhhc---CCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 899 KRHYP---HR-LDPIVEKAIAKY---APQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 899 ~~~~~---~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
..... .. ........+... .....+........+.+.++.+++.+|++.+|++||++++++++-.
T Consensus 225 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 296 (334)
T cd07855 225 LSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF 296 (334)
T ss_pred HHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence 11100 00 000111111100 0100011111112234678999999999999999999999998654
No 343
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.98 E-value=3.6e-32 Score=304.08 Aligned_cols=279 Identities=21% Similarity=0.259 Sum_probs=202.9
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecC-----Cc
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKP-----DF 738 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 738 (983)
.++|.+.+.||+|+||+||+|... +++.||||.++... ......++.+|+++++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457888999999999999999954 68899999986532 222345678899999999999999999988644 34
Q ss_pred eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIA 818 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla 818 (983)
.++|+||+. ++|.+++.. ...+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999996 678777753 345899999999999999999999996 999999999999999999999999999
Q ss_pred ccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHH
Q 042568 819 KLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEW 897 (983)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~ 897 (983)
+....... ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.... .......
T Consensus 156 ~~~~~~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~ 220 (337)
T cd07858 156 RTTSEKGD-------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD--YVHQLKL 220 (337)
T ss_pred cccCCCcc-------------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC--hHHHHHH
Confidence 86542211 1122457889999998765 468899999999999999999999986421 1111111
Q ss_pred HHhhCCC----C----CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH--HHHhHh
Q 042568 898 VKRHYPH----R----LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE--MGRLKQ 967 (983)
Q Consensus 898 ~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~~~ 967 (983)
+...... . ......+.+...... ........+.++..++.+++.+|++.+|++|||++|++++ ++.+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 221 ITELLGSPSEEDLGFIRNEKARRYIRSLPYT-PRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred HHHHhCCCChHHhhhcCchhhhHHHHhcCcc-cccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 1111000 0 001111111111100 0011111123456788999999999999999999999988 665543
Q ss_pred h
Q 042568 968 Y 968 (983)
Q Consensus 968 ~ 968 (983)
.
T Consensus 300 ~ 300 (337)
T cd07858 300 P 300 (337)
T ss_pred c
Confidence 3
No 344
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=7.2e-32 Score=296.22 Aligned_cols=255 Identities=23% Similarity=0.310 Sum_probs=194.4
Q ss_pred CCCCCCCccccCCcEeEEEEEECC-CcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD-NTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 744 (983)
++|...+.||+|+||.||+|.+.+ ++.||||.++..........+.+|++++.+.. ||||+++++++......++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 457778999999999999999764 88899999976544444566777888777775 9999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++ ++.+..... ...+++..+..++.|+++|++|||+.. +|+||||+|+||++++++.++|+|||++......
T Consensus 95 ~~~~-~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 95 LMST-CLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred ccCc-CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9854 666655432 236899999999999999999999742 4999999999999999999999999998765321
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCC----CCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHh
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR----ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~ 900 (983)
.. .....++..|+|||++.+.. ++.++||||||+++|+|++|+.||.....+ .+
T Consensus 169 ~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~---- 226 (296)
T cd06618 169 KA--------------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE----FE---- 226 (296)
T ss_pred Cc--------------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH----HH----
Confidence 11 11134788999999987653 788999999999999999999998532110 00
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
........... ..+. ...+..++.+++.+|+..||++||++++++++-.
T Consensus 227 --------~~~~~~~~~~~-~~~~-----~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 227 --------VLTKILQEEPP-SLPP-----NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred --------HHHHHhcCCCC-CCCC-----CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 11111111100 0000 0124567899999999999999999999998743
No 345
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.98 E-value=4.4e-32 Score=297.72 Aligned_cols=274 Identities=23% Similarity=0.287 Sum_probs=195.3
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
++|+..+.||+|++|.||+|... +++.||+|.+...... ...+.+.+|++++++++||||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999965 6889999998654322 234678899999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC-CCCEEEccccccccccC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE-DLTALVADFGIAKLVKG 823 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~-~~~~kl~Dfgla~~~~~ 823 (983)
|++ +++.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++. ++.+||+|||++.....
T Consensus 82 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSSP--DFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhCC--CCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 47777665332 234688889999999999999999986 999999999999985 56799999999975532
Q ss_pred CcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
... ......|++.|+|||++.+ ..++.++||||+|+++|+|++|+.||...... ..+...... .
T Consensus 156 ~~~-------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~~-~ 220 (294)
T PLN00009 156 PVR-------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFRI-L 220 (294)
T ss_pred Ccc-------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH-h
Confidence 110 1112357889999998876 45789999999999999999999998632110 111111100 0
Q ss_pred CCCCcHHHH-----HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PHRLDPIVE-----KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
......... +......+...+............++.+++.+|++.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 221 GTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred CCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 00000000000000000011234668899999999999999999999874
No 346
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=2.8e-32 Score=293.24 Aligned_cols=249 Identities=25% Similarity=0.293 Sum_probs=200.1
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
+|...+.||.|+||.||+|... +++.||+|.+..... ....+.+.+|++++++++||||+++++++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999975 688999999965432 2346789999999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++++|.+++... ..+++..+..++.|+++||.|||+.+ ++|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999988642 36889999999999999999999986 999999999999999999999999998765432
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPH 904 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 904 (983)
. ......|+..|+|||...+..++.++||||+|+++|+|++|+.||...... ....++.
T Consensus 154 ~--------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~----- 212 (258)
T cd05578 154 T--------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRA----- 212 (258)
T ss_pred c--------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHH-----
Confidence 1 111245888999999999888999999999999999999999998643211 0111111
Q ss_pred CCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH--HHHHH
Q 042568 905 RLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM--LDVAH 960 (983)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~--~evl~ 960 (983)
.... .....+ ...+..+.+++.+|+..||.+||++ +|+++
T Consensus 213 --------~~~~-~~~~~~-------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 213 --------KQET-ADVLYP-------ATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred --------Hhcc-ccccCc-------ccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 1110 000011 1234788899999999999999999 66654
No 347
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.98 E-value=4.4e-32 Score=304.11 Aligned_cols=277 Identities=22% Similarity=0.268 Sum_probs=200.6
Q ss_pred HHHHHHHhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecC
Q 042568 659 YKQLIEATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKP 736 (983)
Q Consensus 659 ~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 736 (983)
..++..++++|...+.||+|+||.||+|.. .+++.||+|+++.... ....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 356667889999999999999999999985 4788999999865432 22346788899999999999999999988533
Q ss_pred ------CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCE
Q 042568 737 ------DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTA 810 (983)
Q Consensus 737 ------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~ 810 (983)
...+++++++ +++|.+++.. ..+++..++.++.|+++|++|||+.+ |+||||||+||++++++.+
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCE
Confidence 3457888877 6788877752 35899999999999999999999996 9999999999999999999
Q ss_pred EEccccccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccC
Q 042568 811 LVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFH 889 (983)
Q Consensus 811 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~ 889 (983)
||+|||+++..... .....||..|+|||...+ ..++.++||||+|+++|||++|+.||.....
T Consensus 160 kl~dfg~~~~~~~~----------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 223 (345)
T cd07877 160 KILDFGLARHTDDE----------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 223 (345)
T ss_pred EEeccccccccccc----------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999998754311 112468899999998766 5678899999999999999999999853211
Q ss_pred CCCchHHHHHhhCC--CC----C-cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 890 DGSSLHEWVKRHYP--HR----L-DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 890 ~~~~l~~~~~~~~~--~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
...+......... .. + .......+... +...+......+.....++.+++.+|++.||.+||++.+++++=
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 224 -IDQLKLILRLVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred -HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHh-cccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 1111111111000 00 0 00001111100 00000000111112356788999999999999999999999774
No 348
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.98 E-value=9e-32 Score=289.25 Aligned_cols=253 Identities=28% Similarity=0.418 Sum_probs=203.2
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecC--CceeEEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKP--DFKALVL 743 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 743 (983)
+|...+.||+|++|.||+|... +++.|++|++..... ....+.+.+|++++++++||||+++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999976 688999999866543 23467899999999999999999999999888 8899999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
||+++++|.+++... ..+++..++.++.|+++|++|||+.+ ++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 999999999998753 27899999999999999999999986 99999999999999999999999999987654
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.... .......++..|+|||...+...+.++||||||+++++|++|+.||.... .........
T Consensus 154 ~~~~-----------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~--- 216 (260)
T cd06606 154 IETG-----------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG---NPMAALYKI--- 216 (260)
T ss_pred cccc-----------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---chHHHHHhc---
Confidence 3210 01123468899999999998889999999999999999999999986432 000000000
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
........ .......++.+++.+|++.+|++||++.|++++
T Consensus 217 ----------~~~~~~~~-------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 217 ----------GSSGEPPE-------IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ----------cccCCCcC-------CCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 00000000 112235789999999999999999999999875
No 349
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.98 E-value=6e-32 Score=302.54 Aligned_cols=282 Identities=20% Similarity=0.279 Sum_probs=201.2
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhc-CCCCccceeeEEecC--Cce
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRI-RHRNLIRIITICSKP--DFK 739 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 739 (983)
..++|+..+.||+|+||.||+|... +++.||||++.... .......+.+|+++++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888899999999999999965 57889999885432 222345677899999999 999999999998654 357
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999997 588887753 25789999999999999999999986 9999999999999999999999999998
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
......... .........||..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... .......
T Consensus 156 ~~~~~~~~~--------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~-~~~~~~~ 226 (337)
T cd07852 156 SLSELEENP--------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL-NQLEKII 226 (337)
T ss_pred ccccccccc--------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence 664322110 0011223468999999998765 45788999999999999999999998532111 1111111
Q ss_pred HhhCCCCCc--------HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH--HHHhH
Q 042568 899 KRHYPHRLD--------PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE--MGRLK 966 (983)
Q Consensus 899 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~~ 966 (983)
.. ...... +..+............. ..........++.+++.+|++.+|++|||+.+++++ ++.+.
T Consensus 227 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 227 EV-IGPPSAEDIESIKSPFAATMLDSLPSRPRKP-LDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred HH-hCCCCHHHHHHHHhhhHHHhhhhcccccccc-hhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 11 100000 00111111111111000 011112246788999999999999999999999986 44443
No 350
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.98 E-value=1.2e-31 Score=287.01 Aligned_cols=250 Identities=28% Similarity=0.437 Sum_probs=201.6
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
.|+..+.||+|++|.||+|... +++.+|+|++..... .....+.+|++++++++|++++++++++......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 3677889999999999999975 688899999966544 34678999999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++++|.+++... ...+++..+..++.|+++|++|||..+ ++||||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 80 SGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred CCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 999999988653 246899999999999999999999985 99999999999999999999999999886653211
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
.....|+..|+|||...+..++.++||||||+++|+|++|+.||..... .
T Consensus 154 --------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~----------- 203 (253)
T cd05122 154 --------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-----M----------- 203 (253)
T ss_pred --------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-----H-----------
Confidence 1234688999999999988899999999999999999999999863210 0
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
............ ..+ . ......++.+++.+|++.||++|||+.|++++
T Consensus 204 -~~~~~~~~~~~~-~~~---~--~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 204 -KALFKIATNGPP-GLR---N--PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred -HHHHHHHhcCCC-CcC---c--ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000010000000 000 0 01124678999999999999999999999865
No 351
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.98 E-value=9.3e-32 Score=292.33 Aligned_cols=246 Identities=25% Similarity=0.332 Sum_probs=192.4
Q ss_pred cccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 675 IGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 675 iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
||+|+||+||+|... +|+.||+|.+.... .......+..|++++++++|||++++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999854 68899999986532 122345677899999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++.... ...+++..+..++.|+++|+.|||+.+ ++||||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~------ 149 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK------ 149 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC------
Confidence 99887543 246899999999999999999999996 9999999999999999999999999987654211
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
......++..|+|||+..+..++.++||||+|+++|+|++|+.||...... .... .+.
T Consensus 150 --------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~-------------~~~ 207 (277)
T cd05577 150 --------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKE-------------ELK 207 (277)
T ss_pred --------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHH-------------HHH
Confidence 111235788999999998888999999999999999999999998642210 0000 011
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
...... .... ......++.+++.+|++.+|++|| ++.+++.+
T Consensus 208 ~~~~~~-~~~~-------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 208 RRTLEM-AVEY-------PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred hccccc-cccC-------CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 111000 0000 012356788999999999999999 66667654
No 352
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=1.1e-31 Score=289.48 Aligned_cols=253 Identities=22% Similarity=0.306 Sum_probs=196.4
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc----CcchhHHHHHHHHHHHhcCCCCccceeeEEecC--Cce
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT----TGEITGSFKRECQILKRIRHRNLIRIITICSKP--DFK 739 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 739 (983)
.+|...+.||+|+||.||+|... ++..||+|.+.... ..+....+.+|++++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999964 68899999875432 223456889999999999999999999998654 457
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++|+||+++++|.+++... ..+++..+..++.|+++|+.|||+.+ ++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY----GALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccc
Confidence 8999999999999888642 34788999999999999999999996 9999999999999999999999999998
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
........ ........|+..|+|||+..+..++.++|||||||++|++++|+.||... .....
T Consensus 155 ~~~~~~~~----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~----~~~~~--- 217 (264)
T cd06653 155 RIQTICMS----------GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY----EAMAA--- 217 (264)
T ss_pred cccccccc----------CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc----CHHHH---
Confidence 65321100 01112246899999999999888899999999999999999999998532 11110
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+............ ......++.+++.+|+. +|..||++.+++.|
T Consensus 218 ----------~~~~~~~~~~~~~-------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 218 ----------IFKIATQPTKPML-------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ----------HHHHHcCCCCCCC-------CcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 1111110001111 12345778999999999 57999999988764
No 353
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.98 E-value=9.6e-32 Score=294.06 Aligned_cols=244 Identities=21% Similarity=0.307 Sum_probs=193.9
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
.+||+|+||.||+|... +++.||||.+..... .....+.+|+.+++.++|+|++++++++...+..++||||+++++|
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccch-hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 57999999999999864 688999998854332 2456789999999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++. ...+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.++|+|||.+.......
T Consensus 105 ~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~------ 170 (292)
T cd06657 105 TDIVT-----HTRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------ 170 (292)
T ss_pred HHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc------
Confidence 98774 235789999999999999999999996 9999999999999999999999999987543211
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
.......|++.|+|||+..+..++.++||||+|+++|+|++|+.||.... .......+...
T Consensus 171 -------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~--~~~~~~~~~~~---------- 231 (292)
T cd06657 171 -------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDN---------- 231 (292)
T ss_pred -------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhh----------
Confidence 11122468899999999988888999999999999999999999985311 00000111110
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+..... .......+.+++.+|++.+|.+||++.+++++
T Consensus 232 ------~~~~~~~-----~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 232 ------LPPKLKN-----LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred ------CCcccCC-----cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 0000000 11244578899999999999999999999985
No 354
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=1.1e-31 Score=289.36 Aligned_cols=244 Identities=25% Similarity=0.327 Sum_probs=194.6
Q ss_pred cccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 675 IGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 675 iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
||+|+||.||+|... +++.||+|.+..... ....+.+.+|++++++++||||+++++++......++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999965 588999999865432 23457899999999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++... ..+++..+..++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||.++......
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~------ 147 (262)
T cd05572 81 WTILRDR----GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ------ 147 (262)
T ss_pred HHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc------
Confidence 9998753 34889999999999999999999986 9999999999999999999999999998664321
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
......|+..|+|||...+..++.++|+||+|+++|+|++|+.||.....+. .+ ...
T Consensus 148 --------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~------------~~~ 204 (262)
T cd05572 148 --------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---ME------------IYN 204 (262)
T ss_pred --------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HH------------HHH
Confidence 1112368889999999988889999999999999999999999986432110 11 111
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS-----MLDVAHE 961 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 961 (983)
...........+ .....++.+++.+|++.+|++||+ ++|++++
T Consensus 205 ~~~~~~~~~~~~-------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 205 DILKGNGKLEFP-------NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred HHhccCCCCCCC-------cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 111000000011 112567999999999999999999 7777663
No 355
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-32 Score=287.46 Aligned_cols=247 Identities=26% Similarity=0.319 Sum_probs=200.1
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
+.|+.-++||+||||.||-++.+ +|+-+|.|.+.+...+ ....-...|-.++++++.+.||.+-.+|..++..++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 56778899999999999999854 6888999988544322 12345678999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
..|.||+|.-+++... ...+++..+.-++.+|+.||++||... ||.||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 265 tlMNGGDLkfHiyn~g--~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHG--NPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EeecCCceeEEeeccC--CCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 9999999999998765 467999999999999999999999995 99999999999999999999999999998875
Q ss_pred CcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 824 IDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.+.. ...+||.||||||++....|+...|.||+||++|||+.|+.||..-- .
T Consensus 340 g~~~--------------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K--------------e 391 (591)
T KOG0986|consen 340 GKPI--------------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK--------------E 391 (591)
T ss_pred CCcc--------------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh--------------h
Confidence 4422 12389999999999999999999999999999999999999985311 1
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS 954 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 954 (983)
..-.+.+|+++..... .+. +.-++++.++....+..||++|.-
T Consensus 392 Kvk~eEvdrr~~~~~~-----ey~---~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 392 KVKREEVDRRTLEDPE-----EYS---DKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred hhhHHHHHHHHhcchh-----hcc---cccCHHHHHHHHHHHccCHHHhcc
Confidence 1112345555433221 111 223456667777789999999864
No 356
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.98 E-value=1.6e-31 Score=292.31 Aligned_cols=273 Identities=22% Similarity=0.286 Sum_probs=197.5
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecC--CceeEEEe
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKP--DFKALVLP 744 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 744 (983)
|.+.+.||+|+||.||+|... +++.||+|.+.... ..+....+.+|++++++++|||++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566789999999999999966 57889999997654 223456788999999999999999999999887 88999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++ +|.+++... ...+++..++.++.|+++||+|||+.+ ++|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9975 887777543 246899999999999999999999986 999999999999999999999999999876543
Q ss_pred cccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||+.... ...+.........
T Consensus 154 ~~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~~~~~ 220 (287)
T cd07840 154 NSA------------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFELCGS 220 (287)
T ss_pred Ccc------------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCC
Confidence 210 1112356788999998765 4578999999999999999999999864221 1111111110000
Q ss_pred CC--CcHHHHHH--Hhhc-CCCCCccccccchHH-HHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HR--LDPIVEKA--IAKY-APQHMPIYYNKVWSD-VVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~--~~~~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.. ..+..... .... .....+........+ ++.++.+++.+|+..+|++||++++++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 221 PTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred CchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 00000000 0000 000000000011111 26788999999999999999999999864
No 357
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=1.1e-31 Score=293.69 Aligned_cols=272 Identities=24% Similarity=0.331 Sum_probs=197.2
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcc-hhHHHHHHHHHHHhc---CCCCccceeeEEecCCc-----
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGE-ITGSFKRECQILKRI---RHRNLIRIITICSKPDF----- 738 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 738 (983)
|.+.+.||+|+||.||+|+.+ +++.||+|+++.....+ ....+.+|+++++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 556789999999999999976 48899999997543322 235567788887776 59999999999987776
Q ss_pred eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIA 818 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla 818 (983)
.+++|||+.+ ++.+++.... ...+++..++.++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||.+
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999974 7888776433 235899999999999999999999986 999999999999999999999999999
Q ss_pred ccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 819 KLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
..+..... .....++..|+|||...+..++.++||||||+++|||++|+.||.... ....+..+.
T Consensus 155 ~~~~~~~~--------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~-~~~~~~~~~ 219 (287)
T cd07838 155 RIYSFEMA--------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS-EADQLDKIF 219 (287)
T ss_pred eeccCCcc--------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC-hHHHHHHHH
Confidence 87643211 112357889999999999889999999999999999999999886321 111122221
Q ss_pred HhhCCCCCcH-HHHHH-HhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 899 KRHYPHRLDP-IVEKA-IAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.......... ..... .........+........+....+.+++.+|++.||++||+++|++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 220 DVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred HHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 1111000000 00000 000000000001111223456788999999999999999999999864
No 358
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.98 E-value=6.8e-32 Score=300.19 Aligned_cols=273 Identities=22% Similarity=0.317 Sum_probs=199.2
Q ss_pred HHHHHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEec-CC
Q 042568 661 QLIEATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSK-PD 737 (983)
Q Consensus 661 ~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 737 (983)
++...+++|...+.||+|+||.||+|... +++.||||.+..... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34457789999999999999999999855 788999998854322 2245678899999999999999999998865 45
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGI 817 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgl 817 (983)
..++++||+ +++|.+++. ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.++|+|||.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred cEEEEeehh-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcccc
Confidence 788999998 468887775 235788888999999999999999996 99999999999999999999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHH
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~ 896 (983)
+...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..... .....
T Consensus 155 ~~~~~~~----------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~--~~~~~ 216 (328)
T cd07856 155 ARIQDPQ----------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH--VNQFS 216 (328)
T ss_pred ccccCCC----------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHH
Confidence 8754311 112357889999998766 5689999999999999999999999853211 00000
Q ss_pred HHHhhCCCCCcHHHH--------HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 897 WVKRHYPHRLDPIVE--------KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 897 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.+.........+..+ +....... ..+............++.+++.+|++.+|++||++++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 217 IITDLLGTPPDDVINTICSENTLRFVQSLPK-REPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHHhCCCCHHHHHhccchhhHHHHhhccc-cCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 011110000011110 00111000 00000000111235688999999999999999999999877
No 359
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=1.5e-31 Score=291.79 Aligned_cols=271 Identities=20% Similarity=0.269 Sum_probs=196.0
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEEecc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
|.+.+.||+|++|.||+|... +++.||||++.............+|+..+++++ |||++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566789999999999999975 578899999865543323345567999999998 999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
+|++.+++.... ...+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||.++.......
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 789988876533 246899999999999999999999986 99999999999999999999999999986543211
Q ss_pred cccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.....|+..|+|||++.+ ..++.++||||||++++||++|+.||...... ........ .....
T Consensus 155 --------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~-~~~~~~~~-~~~~~ 218 (283)
T cd07830 155 --------------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI-DQLYKICS-VLGTP 218 (283)
T ss_pred --------------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChH-HHHHHHHH-hcCCC
Confidence 112458889999998754 55789999999999999999999998532110 01111111 00000
Q ss_pred CcHHHHH------HHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEK------AIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
....... ......+...+............++.+++.+|++.+|++||+++|++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 219 TKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0000000 0000000000000000011124678999999999999999999999864
No 360
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=4.7e-32 Score=303.66 Aligned_cols=270 Identities=19% Similarity=0.261 Sum_probs=196.9
Q ss_pred HhCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCC-----
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPD----- 737 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 737 (983)
..++|...+.||+|+||.||+|.. .++..||||+++..... .....+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 467899999999999999999985 47889999998654322 23457889999999999999999999886543
Q ss_pred -ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccc
Q 042568 738 -FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFG 816 (983)
Q Consensus 738 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfg 816 (983)
..++||||+ +++|.+++. ...+++..++.++.|+++|++|||+.+ |+||||||+||+++.++.++++|||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ceEEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999999 678887775 345899999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 817 IAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 817 la~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
++...... .....+++.|+|||.+.+ ..++.++||||+|+++|++++|+.||..... .....
T Consensus 164 ~~~~~~~~----------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-~~~~~ 226 (343)
T cd07880 164 LARQTDSE----------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH-LDQLM 226 (343)
T ss_pred cccccccC----------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHH
Confidence 98754321 112357889999998876 4578999999999999999999999863211 01111
Q ss_pred HHHHhhCCC--CCcHH-----HHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 896 EWVKRHYPH--RLDPI-----VEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 896 ~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
......... .+... .......... ..+......+.....++.+++.+|++.||++|||+.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 227 EIMKVTGTPSKEFVQKLQSEDAKNYVKKLPR-FRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhcCCCCHHHHHhhcchhHHHHHHhccc-cCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111110000 00000 0000100000 00000111122345678999999999999999999999953
No 361
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.6e-31 Score=295.04 Aligned_cols=250 Identities=23% Similarity=0.313 Sum_probs=194.1
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
|...+.||+|+||.||+|+.. +++.||+|.+.... ..+...++.+|+++++.++|+|++++++++......++|+||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 555678999999999999965 57889999886432 223346788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+. |++.+.+... ...+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 97 ~~-~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 97 CL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred cC-CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 97 5777766432 345889999999999999999999986 999999999999999999999999998765321
Q ss_pred ccccccCCCCccccccCccccccccccccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM---GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
....|+..|+|||.+. ...++.++|||||||++|+|++|+.||...... ..
T Consensus 169 ----------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~----- 222 (308)
T cd06634 169 ----------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SA----- 222 (308)
T ss_pred ----------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-----HH-----
Confidence 1235888999999874 356788999999999999999999997532100 00
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
........ .+.... ......+.+++.+||+.+|++||++++++++-....
T Consensus 223 -------~~~~~~~~----~~~~~~---~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 223 -------LYHIAQNE----SPALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred -------HHHHhhcC----CCCcCc---ccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 00000000 010001 124567889999999999999999999998765443
No 362
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=9.7e-32 Score=289.37 Aligned_cols=252 Identities=21% Similarity=0.298 Sum_probs=195.4
Q ss_pred CCCCCCccccCCcEeEEEEEECC-CcEEEEEEeeccc----CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQD-NTRIAVKVLDLTT----TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
+|.+.+.||+|+||.||++.... +..+++|..+... ......++.+|++++++++||||+++++++......++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 57788999999999999998653 4446666654321 122344677899999999999999999999988999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
+||+++++|.+++.........+++..++.++.|+++|+.|||+.+ ++|+||||+||+++. +.++|+|||.++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999888654333567999999999999999999999986 999999999999975 569999999987664
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.... ......|+..|+|||...+..++.++||||||+++|+|++|+.||... .......
T Consensus 157 ~~~~-------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~-----~~~~~~~--- 215 (260)
T cd08222 157 GSCD-------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ-----NFLSVVL--- 215 (260)
T ss_pred CCcc-------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHH---
Confidence 3211 111245788999999998888899999999999999999999998531 1111111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..... . .+. ....+..++.+++.+|+..+|++||++.|++++
T Consensus 216 ---------~~~~~-~---~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 216 ---------RIVEG-P---TPS----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ---------HHHcC-C---CCC----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 11110 0 000 012355788999999999999999999999875
No 363
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.7e-31 Score=298.29 Aligned_cols=280 Identities=21% Similarity=0.263 Sum_probs=205.8
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCC-----cee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPD-----FKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 740 (983)
+|.+.+.||+|++|.||+|+.. +++.||||.+..... ....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5778899999999999999965 588999999865432 334578999999999999999999999987765 789
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
+||||++ ++|.+++.. ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||.+..
T Consensus 81 lv~e~~~-~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELME-TDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchh-hhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 9999998 478887764 236899999999999999999999996 99999999999999999999999999987
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
....... ........+|..|+|||++.+. .++.++||||+|+++|+|++|+.||..... ......+.
T Consensus 153 ~~~~~~~----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~--~~~~~~i~ 220 (330)
T cd07834 153 VDPDEDE----------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY--IDQLNLIV 220 (330)
T ss_pred ecccccc----------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH--HHHHHHHH
Confidence 6543211 0111224688899999999887 789999999999999999999999864321 00011111
Q ss_pred hhCCCCC--------cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH--HHHhHhh
Q 042568 900 RHYPHRL--------DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE--MGRLKQY 968 (983)
Q Consensus 900 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~~~~ 968 (983)
....... .......+...... .+........+.+.++.+++.+||+.+|++||++++++++ ++.+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 221 EVLGTPSEEDLKFITSEKARNYLKSLPKK-PKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred HhcCCCChhHhhhccccchhhHHhhcccC-CcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 1110000 00001111110100 0000111112245778999999999999999999999986 5555443
No 364
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=1.1e-31 Score=292.91 Aligned_cols=271 Identities=21% Similarity=0.311 Sum_probs=201.1
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
|...+.||+|++|.||+|... +++.+|+|.++..... .....+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 556788999999999999964 6888999998655432 34567889999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
++ ++.+++... ...+++..+..++.|+++||.|||+.+ |+|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~~-~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 81 DT-DLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred CC-CHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 75 887777643 246899999999999999999999986 99999999999999999999999999986653220
Q ss_pred cccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC--
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP-- 903 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~-- 903 (983)
......++..|+|||...+. .++.++||||+|+++|+|++|+.||..... ...+.........
T Consensus 154 -------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~ 219 (283)
T cd05118 154 -------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-IDQLFKIFRTLGTPD 219 (283)
T ss_pred -------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCc
Confidence 01123578899999998876 789999999999999999999999853211 0001111111000
Q ss_pred -CC---CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 -HR---LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 -~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.. .............. .........+++...++.+++.+|++.||.+||++++++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 220 PEVWPKFTSLARNYKFSFPK-KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hHhcccchhhhhhhhhhhcc-ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 00000111000000 00111122234567889999999999999999999999864
No 365
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=2.3e-31 Score=289.12 Aligned_cols=243 Identities=23% Similarity=0.293 Sum_probs=185.7
Q ss_pred ccccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHH---HHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 674 LIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQI---LKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 674 ~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~---l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
+||+|+||.||+|... +++.||+|.+...... .....+..|..+ ++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999964 6889999998654321 112234444443 444579999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+|+|.+++.. ...+++..+..++.|+++|++|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 81 GGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 9999988753 345899999999999999999999986 9999999999999999999999999987543211
Q ss_pred ccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
.....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||........
T Consensus 152 -------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-------------- 204 (278)
T cd05606 152 -------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-------------- 204 (278)
T ss_pred -------------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--------------
Confidence 1123689999999998754 688999999999999999999999864211100
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
......... .....+ ...+.++.+++.+|+..+|++|| ++.+++++
T Consensus 205 -~~~~~~~~~-~~~~~~-------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 205 -HEIDRMTLT-MAVELP-------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred -HHHHHHhhc-cCCCCC-------CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 001111110 000011 12356789999999999999999 99999875
No 366
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-32 Score=304.84 Aligned_cols=260 Identities=22% Similarity=0.317 Sum_probs=213.0
Q ss_pred HHHHHHHhCCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEe--
Q 042568 659 YKQLIEATGGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICS-- 734 (983)
Q Consensus 659 ~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-- 734 (983)
++.+..-++-|++.+.||.|.+|.||+++ .++++.+|||+.+..... .++...|.++++.. .|||++.++|+|.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~--deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE--EEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc--cHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 34444456778899999999999999999 557889999998776554 46778899999988 6999999999984
Q ss_pred ---cCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEE
Q 042568 735 ---KPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTAL 811 (983)
Q Consensus 735 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~k 811 (983)
.++..++|||||.+||..|+++.-. ..++.|..+..|++.++.|+.+||... ++|||||-.|||++.++.+|
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEE
Confidence 4578899999999999999998665 567999999999999999999999994 99999999999999999999
Q ss_pred EccccccccccCCcccccccCCCCccccccCccccccccccccccCC-----CCCCccchhHHHHHHHHHHHhCCCCCCc
Q 042568 812 VADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-----KRASTHGDVYSFGVLLLEIVTGRRPTDV 886 (983)
Q Consensus 812 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~SlG~il~elltg~~p~~~ 886 (983)
++|||.+..+.. ......+.+||+.|||||++.. ..|+.++|+||+|++..||..|.+|+..
T Consensus 164 LvDFGvSaQlds-------------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~D 230 (953)
T KOG0587|consen 164 LVDFGVSAQLDS-------------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCD 230 (953)
T ss_pred Eeeeeeeeeeec-------------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccC
Confidence 999999876542 2244566799999999999865 3477899999999999999999999765
Q ss_pred ccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 887 LFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 887 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+++- .+-+...+.|+..-+.++.-..++.+++..|+..|.+.||++.++++|
T Consensus 231 mHPm-----------------------raLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 231 MHPM-----------------------RALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred cchh-----------------------hhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 4321 111111223333444456667889999999999999999999999853
No 367
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=2.1e-31 Score=286.78 Aligned_cols=242 Identities=21% Similarity=0.305 Sum_probs=185.4
Q ss_pred CccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHH-hcCCCCccceeeEEecCCceeEEEecccC
Q 042568 673 SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILK-RIRHRNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.||+|+||.||+|... +++.||||.+..... ......+..|..++. ..+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999964 688999999864321 112234455555443 45899999999999999999999999999
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
++|.+++... ..+++..+..++.|+++||.|||+.+ ++||||+|+||++++++.++|+|||+++....
T Consensus 82 ~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKTL----GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 9999988642 35889999999999999999999986 99999999999999999999999999875432
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
.....|+..|+|||...+..++.++||||+|+++|||++|..||.... ....
T Consensus 150 ------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~----------- 201 (260)
T cd05611 150 ------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-----PDAV----------- 201 (260)
T ss_pred ------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-----HHHH-----------
Confidence 112358889999999988888999999999999999999999986321 1111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
.+........ .+ ......++.++.+++.+|++.+|++||++.++.+
T Consensus 202 -~~~~~~~~~~--~~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 202 -FDNILSRRIN--WP---EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred -HHHHHhcccC--CC---CcccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 1111111000 00 0011235578899999999999999997654433
No 368
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1e-31 Score=297.53 Aligned_cols=285 Identities=23% Similarity=0.279 Sum_probs=197.3
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcc-hhHHHHHHHHHHHhcCCCCccceeeEEecCC------
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGE-ITGSFKRECQILKRIRHRNLIRIITICSKPD------ 737 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 737 (983)
.++|+..+.||+|+||.||+|... +++.||||.+......+ ....+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468899999999999999999965 68889999986543322 2356788999999999999999999875433
Q ss_pred --ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 738 --FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 738 --~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
..++|+||+++ ++...+... ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.++|+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP---SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcC
Confidence 45899999975 565555432 346899999999999999999999996 999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCch
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSL 894 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l 894 (983)
|+++............ ............|++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ....
T Consensus 160 g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~-~~~~ 236 (311)
T cd07866 160 GLARPYDGPPPNPKGG--GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD-IDQL 236 (311)
T ss_pred ccchhccCCCcccccC--CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH-HHHH
Confidence 9998665332211100 0001112233468899999998765 4578999999999999999999999863211 0111
Q ss_pred HHHHHhhCCC--CCcHHHHHHHhh----cCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 895 HEWVKRHYPH--RLDPIVEKAIAK----YAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 895 ~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.......... ...+.. ..+.. ......+......+......+.+++.+|++.+|++|||+.|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 237 HLIFKLCGTPTEETWPGW-RSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHHHhCCCChhhchhh-hhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1111100000 000000 00000 000001111111122234678999999999999999999999864
No 369
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=3.7e-31 Score=283.64 Aligned_cols=249 Identities=28% Similarity=0.440 Sum_probs=200.9
Q ss_pred CCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+|+..+.||+|++|.||+|... +++.||+|.+...... .....+.+|++++++++|||++++++++......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777899999999999999865 5788999998655432 3457899999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+++++|.+++... ..+++..+..++.|++.|+.|||+.+ |+||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999988643 46899999999999999999999996 9999999999999999999999999998765322
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
.. .....|+..|+|||...+..++.++||||+|+++|+|++|+.||.... ........
T Consensus 154 ~~-------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~~~~~----- 211 (254)
T cd06627 154 KD-------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN----PMAALFRI----- 211 (254)
T ss_pred cc-------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHH-----
Confidence 11 122468899999999988888999999999999999999999986321 11111100
Q ss_pred CcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...... .. .......+.+++.+|+..+|++||++.|++.+
T Consensus 212 --------~~~~~~-~~-------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 212 --------VQDDHP-PL-------PEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred --------hccCCC-CC-------CCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 000000 00 11245678899999999999999999999853
No 370
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=1.7e-31 Score=294.38 Aligned_cols=277 Identities=22% Similarity=0.271 Sum_probs=197.2
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCC-----
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPD----- 737 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 737 (983)
..++|++.+.||+|+||.||+|... +++.||+|.++.... ......+.+|++++++++|||++++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4567889999999999999999975 588899999875532 223457788999999999999999999987654
Q ss_pred -----ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEE
Q 042568 738 -----FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALV 812 (983)
Q Consensus 738 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl 812 (983)
..++|+||+++ ++.+.+... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence 78999999986 665655432 346899999999999999999999996 999999999999999999999
Q ss_pred ccccccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCC
Q 042568 813 ADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDG 891 (983)
Q Consensus 813 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~ 891 (983)
+|||.+......... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.... +.
T Consensus 158 ~dfg~~~~~~~~~~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-~~ 224 (302)
T cd07864 158 ADFGLARLYNSEESR------------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-EL 224 (302)
T ss_pred CcccccccccCCccc------------ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hH
Confidence 999999866432210 0111246788999998765 456889999999999999999999986321 11
Q ss_pred CchHHHHHhh---CCCCCcHHHHHHHhhcCCC--CCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 892 SSLHEWVKRH---YPHRLDPIVEKAIAKYAPQ--HMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 892 ~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+....... .+.....+.+.......+. .........+...+..+.+++.+|++.+|++||++++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 225 AQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred HHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111110 0000000000000000000 00000001112245778999999999999999999999864
No 371
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=3.8e-31 Score=292.55 Aligned_cols=245 Identities=25% Similarity=0.345 Sum_probs=190.9
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
|...+.||+|+||.||+|+.. +++.||+|.+..... ......+.+|++++++++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 445678999999999999964 688899999865432 22345788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
+. |++.+++... ...+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~~---~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 96 5776666532 345899999999999999999999996 99999999999999999999999998864321
Q ss_pred ccccccCCCCccccccCccccccccccccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM---GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
.....|+..|+|||++. ...++.++||||||+++|||++|+.||.... ... ...
T Consensus 174 ---------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~----~~~-~~~--- 230 (313)
T cd06633 174 ---------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----AMS-ALY--- 230 (313)
T ss_pred ---------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----hHH-HHH---
Confidence 11246889999999974 4567889999999999999999999975321 000 000
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...... .+.... ......+.+++.+|++.+|++||++.+++++
T Consensus 231 ---------~~~~~~----~~~~~~---~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 231 ---------HIAQND----SPTLQS---NEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ---------HHHhcC----CCCCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 011111 1233568889999999999999999999975
No 372
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=8.6e-33 Score=292.22 Aligned_cols=246 Identities=26% Similarity=0.409 Sum_probs=202.7
Q ss_pred CCccccCCcEeEEEEEE-CCCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCc
Q 042568 672 SSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
.+++|+|.||+||-|++ ++|+.||||++++.. ..+...+++.|+.|+++++||.||.+...|+.++..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 57899999999999995 479999999997654 3334578999999999999999999999999999999999999765
Q ss_pred ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC---CCEEEccccccccccCCcc
Q 042568 750 SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED---LTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 750 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~---~~~kl~Dfgla~~~~~~~~ 826 (983)
-|+-.+... ..++++....-+..||+.||.|||.++ |+|+|+||+|||+... -.+||||||.|++.++.
T Consensus 649 MLEMILSsE---kgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-- 720 (888)
T KOG4236|consen 649 MLEMILSSE---KGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-- 720 (888)
T ss_pred HHHHHHHhh---cccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchh--
Confidence 555555433 456888888899999999999999995 9999999999999643 47999999999988742
Q ss_pred cccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
.....++||+.|+|||++..+.|.+.-|+||+|||+|--++|..||.. ++++.+.+.
T Consensus 721 ------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE----dEdIndQIQ------- 777 (888)
T KOG4236|consen 721 ------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE----DEDINDQIQ------- 777 (888)
T ss_pred ------------hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC----ccchhHHhh-------
Confidence 334457899999999999999999999999999999999999999863 222222221
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
...- .+-...|.++..+.+++|...++..-++|.|+++.+.+
T Consensus 778 ---------NAaF----MyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 778 ---------NAAF----MYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred ---------cccc----ccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 1110 11123588899999999999999999999999887743
No 373
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=4.7e-31 Score=295.20 Aligned_cols=287 Identities=21% Similarity=0.265 Sum_probs=197.7
Q ss_pred CCCCC-CCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcc-------------hhHHHHHHHHHHHhcCCCCccceee
Q 042568 667 GGFCP-SSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGE-------------ITGSFKRECQILKRIRHRNLIRIIT 731 (983)
Q Consensus 667 ~~f~~-~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~niv~l~~ 731 (983)
++|.. .+.||+|+||.||+|... +++.||||.+....... ....+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45553 467999999999999965 68899999986543221 1125778999999999999999999
Q ss_pred EEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEE
Q 042568 732 ICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTAL 811 (983)
Q Consensus 732 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~k 811 (983)
++...+..++||||++ |+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEE
Confidence 9999999999999997 588887753 345889999999999999999999986 99999999999999999999
Q ss_pred EccccccccccCCcccccccCCCC-ccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccC
Q 042568 812 VADFGIAKLVKGIDESVNCANDSM-SFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFH 889 (983)
Q Consensus 812 l~Dfgla~~~~~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~ 889 (983)
|+|||.++.............+.. ..........++..|+|||++.+. .++.++||||+|+++|||++|+.||.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999987652111000000000 000111223578899999998764 468999999999999999999999863211
Q ss_pred CCCchHHHHHhhCCCCCcHHHHHH--Hhhc--CCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 890 DGSSLHEWVKRHYPHRLDPIVEKA--IAKY--APQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 890 ~~~~l~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
...+........... ....... +... .....+............++.+++.+|++.+|++||+++|++.+-.
T Consensus 240 -~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 240 -IDQLGRIFELLGTPN-EDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred -HHHHHHHHHHhCCCc-hhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 111111111100000 0000000 0000 0000000000111223567889999999999999999999997543
No 374
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.6e-33 Score=286.19 Aligned_cols=264 Identities=24% Similarity=0.328 Sum_probs=198.5
Q ss_pred hCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeeccc--Cc----chhHHHHHHHHHHHhcCCCCccceeeEEe-cCC
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTT--TG----EITGSFKRECQILKRIRHRNLIRIITICS-KPD 737 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~ 737 (983)
.++|-.+++||+|||+.||||.+ ...+.||||+-.... .+ ...+...+|.+|.+.+.||.||++|+|+. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 34677788999999999999994 456779999853322 11 13456778999999999999999999995 456
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeC---CCCCEEEcc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLD---EDLTALVAD 814 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~---~~~~~kl~D 814 (983)
..+-|.|||+|.+|+-++... +.+++.+++.|+.||+.||.||.+.. ++|||-|+||.|||+. .-|.+||+|
T Consensus 542 sFCTVLEYceGNDLDFYLKQh----klmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQH----KLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred cceeeeeecCCCchhHHHHhh----hhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeee
Confidence 778899999999999998753 45889999999999999999999876 4799999999999994 457899999
Q ss_pred ccccccccCCcccccccCCCCccccccCccccccccccccccCC----CCCCccchhHHHHHHHHHHHhCCCCCCcccCC
Q 042568 815 FGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG----KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHD 890 (983)
Q Consensus 815 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~ 890 (983)
||+++++.+..... .+++ .-+...+||.+|++||.+-- .+.+.|+||||+|||+|+++.|+.||...
T Consensus 617 FGLSKIMdddSy~~---vdGm---eLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn--- 687 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNS---VDGM---ELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN--- 687 (775)
T ss_pred cchhhhccCCccCc---ccce---eeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc---
Confidence 99999997654321 1222 22344689999999998753 35688999999999999999999998531
Q ss_pred CCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 891 GSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 891 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
....++... ..+........|. -+-...+...+|.+|+++--++|.++.++..
T Consensus 688 -qsQQdILqe-----------NTIlkAtEVqFP~-----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 688 -QSQQDILQE-----------NTILKATEVQFPP-----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred -hhHHHHHhh-----------hchhcceeccCCC-----CCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 111111110 0111111111110 0124567889999999999999999988864
No 375
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-32 Score=270.18 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=202.2
Q ss_pred hCCCCCC-CccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEec----CCc
Q 042568 666 TGGFCPS-SLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSK----PDF 738 (983)
Q Consensus 666 ~~~f~~~-~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~ 738 (983)
+++|.+. ++||-|-.|.|-.+..+ +++++|+|++. .....++|++..-.. .|||||.++++|.. ...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~------Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL------DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHh------cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 3444433 57999999999999854 78999999983 235567899986666 69999999998843 345
Q ss_pred eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC---CCCEEEccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE---DLTALVADF 815 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~---~~~~kl~Df 815 (983)
..+|||+|+||.|...++... ...+++.++..|+.||+.|+.|||+. +|.||||||+|+|.+. +..+|++||
T Consensus 134 LLiVmE~meGGeLfsriq~~g--~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRG--DQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eEeeeecccchHHHHHHHHcc--cccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccc
Confidence 679999999999999998765 56799999999999999999999998 4999999999999964 567999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
|.|+.-... ....+.+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||....+ ..
T Consensus 209 GFAK~t~~~--------------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg--~a-- 270 (400)
T KOG0604|consen 209 GFAKETQEP--------------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--LA-- 270 (400)
T ss_pred ccccccCCC--------------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC--cc--
Confidence 999865421 222345779999999999999999999999999999999999999975432 11
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+.+-..+.+...... .-...|+..++...++++.+++.+|++|.|+.|++.+=+
T Consensus 271 ----------ispgMk~rI~~gqy~----FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpw 324 (400)
T KOG0604|consen 271 ----------ISPGMKRRIRTGQYE----FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPW 324 (400)
T ss_pred ----------CChhHHhHhhccCcc----CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCch
Confidence 111122222221111 113468889999999999999999999999999998755
No 376
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=2.2e-31 Score=287.40 Aligned_cols=252 Identities=23% Similarity=0.282 Sum_probs=194.2
Q ss_pred cccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 675 IGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 675 iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
||+|+||.||++... +++.||+|.+..... ....+.+.+|++++++++||||+++++.+......++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 489999999865432 23457789999999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++... ..+++..+..++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||++...........
T Consensus 81 ~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-- 151 (265)
T cd05579 81 ASLLENV----GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL-- 151 (265)
T ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc--
Confidence 9988643 36899999999999999999999986 99999999999999999999999999876542211000
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
...........++..|+|||...+..++.++||||||+++|++++|+.||.... .. +..+
T Consensus 152 ---~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~------------~~~~ 211 (265)
T cd05579 152 ---NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-----PE------------EIFQ 211 (265)
T ss_pred ---ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HH------------HHHH
Confidence 000012233468889999999988888999999999999999999999986321 11 1111
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
....... ..+.. ...+..+.+++.+|++.+|++||++.++.+.+
T Consensus 212 ~~~~~~~--~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 212 NILNGKI--EWPED-----VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHhcCCc--CCCcc-----ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 1111000 00100 01257789999999999999999994444433
No 377
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=4.6e-31 Score=289.03 Aligned_cols=253 Identities=23% Similarity=0.335 Sum_probs=195.3
Q ss_pred CCCCCCccccCCcEeEEEEEE----CCCcEEEEEEeecccC---cchhHHHHHHHHHHHhc-CCCCccceeeEEecCCce
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL----QDNTRIAVKVLDLTTT---GEITGSFKRECQILKRI-RHRNLIRIITICSKPDFK 739 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 739 (983)
+|+..+.||+|+||.||+|.. .+|+.||+|++..... ....+++.+|+++++++ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 467789999999999999986 3688899999865321 22346788999999999 599999999999988899
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++|+||+++++|.+++.. ...+++..+..++.|+++||+|||+.+ ++||||||+||++++++.++|+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999998864 345788999999999999999999986 9999999999999999999999999997
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCC--CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK--RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEW 897 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~ 897 (983)
....... .......|+..|+|||...+. .++.++||||||+++|+|++|+.||.... .......+
T Consensus 154 ~~~~~~~------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-~~~~~~~~ 220 (290)
T cd05613 154 EFHEDEV------------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG-EKNSQAEI 220 (290)
T ss_pred ecccccc------------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC-ccccHHHH
Confidence 6542211 111124688999999998753 46789999999999999999999985321 11111111
Q ss_pred HHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 042568 898 VKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP-----SMLDVAHE 961 (983)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 961 (983)
.. .......+ .+ ......+.+++.+|++.+|++|| ++++++.+
T Consensus 221 ~~------------~~~~~~~~--~~-------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 221 SR------------RILKSEPP--YP-------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HH------------HhhccCCC--CC-------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 11 11111000 01 12346788999999999999997 77777764
No 378
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=3.7e-31 Score=295.40 Aligned_cols=274 Identities=18% Similarity=0.217 Sum_probs=194.3
Q ss_pred CCCCCCccccCCcEeEEEEEEC-C--CcEEEEEEeecccCc-chhHHHHHHHHHHHhc-CCCCccceeeEEec----CCc
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ-D--NTRIAVKVLDLTTTG-EITGSFKRECQILKRI-RHRNLIRIITICSK----PDF 738 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~-~--~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~ 738 (983)
+|...+.||+|+||.||+|... + +..||+|.+...... ...+.+.+|+++++++ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777889999999999999965 3 678999998643222 2356788999999999 59999999987532 245
Q ss_pred eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccc
Q 042568 739 KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIA 818 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla 818 (983)
.++++||++ ++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 688889986 588887753 346899999999999999999999996 999999999999999999999999999
Q ss_pred ccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHH
Q 042568 819 KLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEW 897 (983)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~ 897 (983)
+......... ........||..|+|||+..+ ..++.++||||+|+++|+|++|+.||..... ...+...
T Consensus 153 ~~~~~~~~~~---------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~-~~~~~~~ 222 (332)
T cd07857 153 RGFSENPGEN---------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY-VDQLNQI 222 (332)
T ss_pred eecccccccc---------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH-HHHHHHH
Confidence 8664322110 011223578999999998765 5688999999999999999999999864211 0011111
Q ss_pred HHhhCCCCCcHHHH--------HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 898 VKRHYPHRLDPIVE--------KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 898 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+.. ......+... ........ .........+......+.+++.+|++.+|++|||++|++++
T Consensus 223 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 223 LQV-LGTPDEETLSRIGSPKAQNYIRSLPN-IPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHH-hCCCCHHHHHhhhhhhHHHHHHhccc-cCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111 0000000000 00000000 00001111112235678999999999999999999999864
No 379
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=2.1e-31 Score=298.44 Aligned_cols=272 Identities=20% Similarity=0.280 Sum_probs=194.3
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecC--------
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKP-------- 736 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 736 (983)
.++|...+.||+|+||.||+|... +++.||+|.+..... +..+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 367889999999999999999964 688999999865543 3457788999999999999999999876543
Q ss_pred ------CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC-CCC
Q 042568 737 ------DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE-DLT 809 (983)
Q Consensus 737 ------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~-~~~ 809 (983)
...++|+||++ ++|.+++. ...+++..++.++.|+++||.|||+.+ |+||||||+||+++. ++.
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~ 153 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLV 153 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCce
Confidence 34689999997 48877664 235889999999999999999999986 999999999999984 567
Q ss_pred EEEccccccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 042568 810 ALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLF 888 (983)
Q Consensus 810 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~ 888 (983)
++++|||.++........ ........|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||....
T Consensus 154 ~kl~dfg~~~~~~~~~~~----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~ 223 (342)
T cd07854 154 LKIGDFGLARIVDPHYSH----------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAH 223 (342)
T ss_pred EEECCcccceecCCcccc----------ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 899999999865432111 011122357889999997654 567889999999999999999999986431
Q ss_pred CCCCchHHHHHhhCCCCCcHH-------HHHHHh-hcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 889 HDGSSLHEWVKRHYPHRLDPI-------VEKAIA-KYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 889 ~~~~~l~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
.. ....... ...+...... ...... .......+ ..........++.+++.+|++.||++|||++|+++
T Consensus 224 ~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 224 EL-EQMQLIL-ESVPVVREEDRNELLNVIPSFVRNDGGEPRRP--LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HH-HHHHHHH-HhcCCCChHHhhhhhhhhhhhhhhcccccCCC--HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 10 0111111 1111110000 000010 00000000 00011224567889999999999999999999996
Q ss_pred H
Q 042568 961 E 961 (983)
Q Consensus 961 ~ 961 (983)
+
T Consensus 300 h 300 (342)
T cd07854 300 H 300 (342)
T ss_pred C
Confidence 4
No 380
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=4.4e-31 Score=288.01 Aligned_cols=271 Identities=25% Similarity=0.316 Sum_probs=198.9
Q ss_pred CCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc-CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT-TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
|+..+.||+|++|.||+|+.. +++.||+|.+.... .....+.+..|++++++++|+|++++++++...+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456788999999999999965 58999999987654 2234567889999999999999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDE 826 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~ 826 (983)
+ ++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||+|+||++++++.++|+|||.++.......
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 58999887532 46899999999999999999999996 99999999999999999999999999876543211
Q ss_pred cccccCCCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCC
Q 042568 827 SVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHR 905 (983)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 905 (983)
......++..|+|||.+.+. .++.++||||||+++||+++|+.||...... ..+.. +.......
T Consensus 154 -------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~-~~~~~~~~ 218 (282)
T cd07829 154 -------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFK-IFQILGTP 218 (282)
T ss_pred -------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHH-HHHHhCCC
Confidence 11123467789999998776 7899999999999999999999998532110 00111 11111000
Q ss_pred CcHHHHHH--H---hhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 906 LDPIVEKA--I---AKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 906 ~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
........ + ....+..........+......+.+++.+|++.+|++||++++++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 219 TEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000 0 00000000000011112235679999999999999999999999864
No 381
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.5e-31 Score=299.84 Aligned_cols=270 Identities=22% Similarity=0.289 Sum_probs=197.9
Q ss_pred HHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCc---
Q 042568 664 EATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDF--- 738 (983)
Q Consensus 664 ~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 738 (983)
+..++|...+.||+|++|.||+|... +++.||||++..... .+....+.+|++++++++|||++++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34678999999999999999999975 578899999865422 2234667889999999999999999998765554
Q ss_pred ---eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 739 ---KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 739 ---~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
.++|+||+ +++|.+++.. ..+++..++.++.|+++|++|||+.+ |+||||||+||+++.++.++|+||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccc
Confidence 79999999 5688888763 45899999999999999999999986 999999999999999999999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCch
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSL 894 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l 894 (983)
|++...... .....++..|+|||...+ ..++.++||||+|+++||+++|+.||..... ...+
T Consensus 163 g~~~~~~~~----------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~-~~~~ 225 (343)
T cd07851 163 GLARHTDDE----------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH-IDQL 225 (343)
T ss_pred ccccccccc----------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-HHHH
Confidence 999765321 112357889999998765 4678999999999999999999999853211 0011
Q ss_pred HHHHHhhCCCCCcHH--------HHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 895 HEWVKRHYPHRLDPI--------VEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 895 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.... ...+...... ....+...... ........+.....++.+++.+|+..+|++|||+.|++++
T Consensus 226 ~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 226 KRIM-NLVGTPDEELLQKISSESARNYIQSLPQM-PKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHH-HhcCCCCHHHHhhccchhHHHHHHhcccc-CCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 1111 1111000000 01111110000 0000001111235789999999999999999999999875
No 382
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=4.2e-31 Score=289.04 Aligned_cols=256 Identities=24% Similarity=0.343 Sum_probs=196.8
Q ss_pred CCCCCCccccCCcEeEEEEEEC----CCcEEEEEEeecccC---cchhHHHHHHHHHHHhc-CCCCccceeeEEecCCce
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQ----DNTRIAVKVLDLTTT---GEITGSFKRECQILKRI-RHRNLIRIITICSKPDFK 739 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 739 (983)
+|...+.||+|+||.||++... +++.||||.++.... ......+.+|+++++++ +||||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3667889999999999999843 567899999864321 22346788999999999 599999999999999999
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccc
Confidence 999999999999988864 235889999999999999999999986 9999999999999999999999999987
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCCC--CCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR--ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEW 897 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~ 897 (983)
........ ......|+..|+|||...+.. .+.++||||||+++|||++|+.||..... ......
T Consensus 154 ~~~~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~- 219 (288)
T cd05583 154 EFLAEEEE------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSE- 219 (288)
T ss_pred cccccccc------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHH-
Confidence 65432111 111245889999999987654 68899999999999999999999853110 011111
Q ss_pred HHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 898 VKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
+.+.+..... ..+ ......+.+++.+|++.+|++|||++++.+.|+.
T Consensus 220 ------------~~~~~~~~~~-~~~-------~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 220 ------------ISRRILKSKP-PFP-------KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ------------HHHHHHccCC-CCC-------cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 1111111111 011 1234678899999999999999998877766543
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.7e-32 Score=278.55 Aligned_cols=270 Identities=21% Similarity=0.278 Sum_probs=202.9
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-C-C----CccceeeEEecCCc
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-H-R----NLIRIITICSKPDF 738 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~~~~~~~~~ 738 (983)
+++|.+...+|+|+||.|-++.+. .+..||||+++.. +...+..+-|+++++++. + | -+|++.++|...++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 678999999999999999999854 4678999998543 334567778999999993 2 2 37888889999999
Q ss_pred eeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC------------
Q 042568 739 KALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE------------ 806 (983)
Q Consensus 739 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~------------ 806 (983)
.++|+|.+ |-|+.+++.... -.+++...++.|++|++++++|||+.+ ++|-|+||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N~--y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENN--YIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred eEEEEecc-ChhHHHHhccCC--ccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCc
Confidence 99999999 458999998643 467899999999999999999999995 999999999999931
Q ss_pred --------CCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHH
Q 042568 807 --------DLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIV 878 (983)
Q Consensus 807 --------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ell 878 (983)
+..++|+|||.|+...+.+ ..++.|..|+|||++.+-.++.++||||+|||++|+.
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~h----------------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEHH----------------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccCc----------------ceeeeccccCCchheeccCcCCccCceeeeeEEEEee
Confidence 3468999999998765433 2367899999999999999999999999999999999
Q ss_pred hCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHH-----Hhhc----------------CCCCCc-cccccchHHHHHH
Q 042568 879 TGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKA-----IAKY----------------APQHMP-IYYNKVWSDVVLE 936 (983)
Q Consensus 879 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~----------------~~~~~~-~~~~~~~~~~~~~ 936 (983)
+|..-|.. .++.+.+ .++.....+....++.+. .... .+...| ..+...-+....+
T Consensus 304 tG~~LFqt-Hen~EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~ 381 (415)
T KOG0671|consen 304 TGETLFQT-HENLEHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQ 381 (415)
T ss_pred ccceeccc-CCcHHHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhH
Confidence 99998753 1122222 222222221111122221 0000 000000 0111122456677
Q ss_pred HHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 937 LIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 937 l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
+.+|+.+|+.+||.+|+|+.|++.+
T Consensus 382 LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 382 LFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHHHHHccCccccccHHHHhcC
Confidence 9999999999999999999999875
No 384
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=313.80 Aligned_cols=260 Identities=23% Similarity=0.258 Sum_probs=203.8
Q ss_pred HHHHHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCC
Q 042568 661 QLIEATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPD 737 (983)
Q Consensus 661 ~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 737 (983)
++.-..++|.+.++||+|+||.|..++.+ +++.||+|++++-.. ....+-|..|-.+|..-+.+-|+.+...|.++.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 33444567889999999999999999965 678899999865321 123577999999999999999999999999999
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGI 817 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgl 817 (983)
+.|+|||||+||+|-..+.... .+++..++-++..|+-||+-+|+.| +|||||||+|||+|..|++|++|||.
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchh
Confidence 9999999999999999987542 5899999999999999999999997 99999999999999999999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccC----C-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCC
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM----G-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGS 892 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~ 892 (983)
+-.+...+. ......+|||.|.+||++. + +.|++.+|.||+||++|||+.|..||...
T Consensus 222 Clkm~~dG~------------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad----- 284 (1317)
T KOG0612|consen 222 CLKMDADGT------------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD----- 284 (1317)
T ss_pred HHhcCCCCc------------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-----
Confidence 987764332 1223468999999999875 2 57899999999999999999999998531
Q ss_pred chHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC---HHHHHHHH
Q 042568 893 SLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS---MLDVAHEM 962 (983)
Q Consensus 893 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~evl~~L 962 (983)
++.+ .+.+.+.....-..| ...+++.++.+||.+.+. +|+.|.. ++|+..|-
T Consensus 285 slve------------TY~KIm~hk~~l~FP-----~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 285 SLVE------------TYGKIMNHKESLSFP-----DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred HHHH------------HHHHHhchhhhcCCC-----cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 1111 111111111111111 012366778888887765 7888887 88888753
No 385
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=5.5e-31 Score=286.88 Aligned_cols=262 Identities=23% Similarity=0.327 Sum_probs=202.8
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 742 (983)
++|...+.||+|+||.||+|... +++.||+|++.... .....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999965 68999999986532 2223467889999999998 99999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+++++|.+++... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRKY----GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 9999999999988753 36999999999999999999999986 9999999999999999999999999998765
Q ss_pred CCccccccc-------CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 823 GIDESVNCA-------NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 823 ~~~~~~~~~-------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
......... ..............|+..|+|||...+..++.++||||+|++++++++|+.||.... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~-- 227 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN----E-- 227 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc----H--
Confidence 432110000 000000112233468899999999988889999999999999999999999986421 0
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH----HHHHHH
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM----LDVAHE 961 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~----~evl~~ 961 (983)
.......... . ...+ ...+..+.+++.+|++.+|++||++ +|++++
T Consensus 228 -----------~~~~~~~~~~-~-~~~~-------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 228 -----------YLTFQKILKL-E-YSFP-------PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred -----------HHHHHHHHhc-C-CCCC-------CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 0011111100 0 0011 1235678899999999999999999 777654
No 386
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=244.55 Aligned_cols=267 Identities=24% Similarity=0.365 Sum_probs=196.8
Q ss_pred CCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcc-hhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGE-ITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.|...++||+|.||+||||+. .+++.||+|+.......+ ......+|+-+++.++|.|||++++....+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 355578899999999999994 568889999987765544 356788999999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
|.. .|..+...- ...++...++.++.|+++||.|+|++. +.|||+||.|++++.+|+.|++|||+|+.++-.-
T Consensus 83 cdq-dlkkyfdsl---ng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSL---NGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHHhc---CCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 964 666655433 446899999999999999999999995 9999999999999999999999999999775322
Q ss_pred ccccccCCCCccccccCccccccccccccccCCCC-CCccchhHHHHHHHHHHHhCCCCCCcccCCCCc---hHHHHHhh
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR-ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSS---LHEWVKRH 901 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~---l~~~~~~~ 901 (983)
.. ....+-|..|++|.++.+.+ |++..|+||.|||+.|+.....|. +++... +..+.+..
T Consensus 156 rc-------------ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrpl---fpg~dvddqlkrif~~l 219 (292)
T KOG0662|consen 156 RC-------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL---FPGNDVDDQLKRIFRLL 219 (292)
T ss_pred Ee-------------eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCC---CCCCcHHHHHHHHHHHh
Confidence 11 11236789999999998854 788999999999999999966663 222221 22211110
Q ss_pred --CCCCCcHHHHHHHhhcCCCC-Cccc-cccchHHHHHH----HHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 902 --YPHRLDPIVEKAIAKYAPQH-MPIY-YNKVWSDVVLE----LIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 902 --~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~----l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+.-.+ .+....+.. .|.+ ....|....+. -.+++...+.-+|..|.++++.+++
T Consensus 220 g~p~ed~wp----s~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 220 GTPTEDQWP----SMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCCccccCC----ccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 0011011 011111111 1111 11134444444 4788888999999999999998875
No 387
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=1.3e-30 Score=314.20 Aligned_cols=147 Identities=27% Similarity=0.391 Sum_probs=131.0
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++|.+.++||+|+||.||+|... +++.||||+++... .......+.+|+++++.++||||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999966 68899999986543 2223577889999999999999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
||+++++|.+++... ..+++..++.|+.||+.||+|||..+ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~----~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIY----GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 999999999988642 35788999999999999999999986 99999999999999999999999999874
No 388
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=2.8e-30 Score=276.16 Aligned_cols=240 Identities=29% Similarity=0.376 Sum_probs=192.3
Q ss_pred cccCCcEeEEEEEEC-CCcEEEEEEeecccCc--chhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccc
Q 042568 675 IGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTG--EITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSL 751 (983)
Q Consensus 675 iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 751 (983)
||+|+||.||++... +++.||+|.+...... .....+..|++++++++|||++++++.+...+..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999965 5889999998655332 2456889999999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccccc
Q 042568 752 ENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCA 831 (983)
Q Consensus 752 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 831 (983)
.+++... ..+++..+..++.|+++|+.|+|+.+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~----- 148 (250)
T cd05123 81 FSHLSKE----GRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS----- 148 (250)
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCCC-----
Confidence 9988643 35899999999999999999999985 99999999999999999999999999876543210
Q ss_pred CCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 832 NDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
......|+..|+|||...+...+.++|+||||+++|++++|+.||..... .. ..+
T Consensus 149 --------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~------------~~~ 203 (250)
T cd05123 149 --------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KE------------IYE 203 (250)
T ss_pred --------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HH------------HHH
Confidence 11224688899999999988889999999999999999999999863211 11 111
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH---HHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM---LDVAH 960 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~---~evl~ 960 (983)
..... ....+ ...+.++.+++.+|+..||++||++ +++.+
T Consensus 204 ~~~~~--~~~~~-------~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 204 KILKD--PLRFP-------EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred HHhcC--CCCCC-------CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 11110 00111 1125678899999999999999999 55543
No 389
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=267.71 Aligned_cols=270 Identities=22% Similarity=0.323 Sum_probs=215.5
Q ss_pred HHHHHHHhCCCCCCCccccCCcEeEEEEEECC------CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeE
Q 042568 659 YKQLIEATGGFCPSSLIGSGRFGHVYKGVLQD------NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITI 732 (983)
Q Consensus 659 ~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 732 (983)
.+++.....+++...++-+|.||.||+|.|.+ .+.|-||.++....+.....+..|...+..+.|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 34555556678888899999999999998764 344678888777666677889999999999999999999998
Q ss_pred Eec-CCceeEEEecccCcccccccccccC----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC
Q 042568 733 CSK-PDFKALVLPLMSNGSLENHLYPSHG----LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED 807 (983)
Q Consensus 733 ~~~-~~~~~lv~e~~~~gsL~~~l~~~~~----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~ 807 (983)
+.+ .+..+++|.++.-|+|..++...++ ..+.++..+...++.|++.|++|||+++ |||.||.+.|.++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence 854 4577889999999999999874332 2345788889999999999999999996 9999999999999999
Q ss_pred CCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 042568 808 LTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTDV 886 (983)
Q Consensus 808 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~~ 886 (983)
.++||+|=.+++.+-+.+.+. .. ........||+||.+....|+..+|||||||++|||+| |+.||..
T Consensus 433 LqVkltDsaLSRDLFP~DYhc--LG---------DnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae 501 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHC--LG---------DNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE 501 (563)
T ss_pred eeEEeccchhccccCcccccc--cC---------CCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc
Confidence 999999999999887665442 21 12235678999999999999999999999999999999 9999864
Q ss_pred ccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 887 LFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 887 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
.. ...+..+ +.+.+. ...+ -+|+.++..++..||+.+|++||+++|++..|+++.
T Consensus 502 ID--PfEm~~y----------------lkdGyR--laQP-----~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 502 ID--PFEMEHY----------------LKDGYR--LAQP-----FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred cC--HHHHHHH----------------Hhccce--ecCC-----CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 32 1111222 222111 1111 248899999999999999999999999999999875
Q ss_pred h
Q 042568 967 Q 967 (983)
Q Consensus 967 ~ 967 (983)
.
T Consensus 557 ~ 557 (563)
T KOG1024|consen 557 T 557 (563)
T ss_pred H
Confidence 4
No 390
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-30 Score=303.48 Aligned_cols=258 Identities=24% Similarity=0.407 Sum_probs=205.2
Q ss_pred CCCCccccCCcEeEEEEEEC----C----CcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCcee
Q 042568 670 CPSSLIGSGRFGHVYKGVLQ----D----NTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKA 740 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~----~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 740 (983)
.+.+.+|+|.||.|++|... . ...||||.++........+.+..|+++|+.+ +|+||+.++|+|......+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~ 378 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY 378 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence 34568999999999999843 1 3459999998777666788999999999999 6999999999999988999
Q ss_pred EEEecccCccccccccccc---Cc-------C--CCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC
Q 042568 741 LVLPLMSNGSLENHLYPSH---GL-------S--HGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL 808 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~---~~-------~--~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~ 808 (983)
+|+||++.|+|.+++...+ .. . ..++..+.+.+++|||.|++||++.. +||||+-+.|||+.++.
T Consensus 379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~~~~ 455 (609)
T KOG0200|consen 379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLITKNK 455 (609)
T ss_pred EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEecCCC
Confidence 9999999999999998665 10 1 23889999999999999999999984 99999999999999999
Q ss_pred CEEEccccccccccCCcccccccCCCCccccccCcccc--ccccccccccCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 042568 809 TALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCG--SVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT-GRRPTD 885 (983)
Q Consensus 809 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt-g~~p~~ 885 (983)
.+||+|||+|+.....+... .. .-.| ...|||||.+....++.|+|||||||++||++| |..||.
T Consensus 456 ~~kIaDFGlar~~~~~~~y~----------~~--~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp 523 (609)
T KOG0200|consen 456 VIKIADFGLARDHYNKDYYR----------TK--SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYP 523 (609)
T ss_pred EEEEccccceeccCCCCceE----------ec--CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCC
Confidence 99999999999654332211 00 0112 245999999999999999999999999999999 778874
Q ss_pred cccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 042568 886 VLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRL 965 (983)
Q Consensus 886 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 965 (983)
.... . .++++ .+........| ..|..++.++|..||+.+|++||++.|+.+.++..
T Consensus 524 ~~~~-~---------------~~l~~-~l~~G~r~~~P-------~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 524 GIPP-T---------------EELLE-FLKEGNRMEQP-------EHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CCCc-H---------------HHHHH-HHhcCCCCCCC-------CCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 3110 0 11211 22222222222 34678899999999999999999999999999885
Q ss_pred H
Q 042568 966 K 966 (983)
Q Consensus 966 ~ 966 (983)
.
T Consensus 580 l 580 (609)
T KOG0200|consen 580 L 580 (609)
T ss_pred H
Confidence 3
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-31 Score=248.66 Aligned_cols=201 Identities=25% Similarity=0.293 Sum_probs=169.3
Q ss_pred CCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecccCc
Q 042568 672 SSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLMSNG 749 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 749 (983)
...||+|++|.|-+-++ .+|+..|||++.........++..+|+.+..+- .+|.+|.+||.+......++.||.|. .
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-t 129 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-T 129 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-h
Confidence 56799999999998885 578999999997766655677888899886654 79999999999999999999999996 4
Q ss_pred ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccccc
Q 042568 750 SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVN 829 (983)
Q Consensus 750 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~ 829 (983)
||+.+..........+++..+-+|+..+.+||.|||++- .++|||+||+|||++.+|++|+||||++..+.+.-
T Consensus 130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi---- 203 (282)
T KOG0984|consen 130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI---- 203 (282)
T ss_pred hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhh----
Confidence 887776655444667899999999999999999999986 79999999999999999999999999998765321
Q ss_pred ccCCCCccccccCccccccccccccccCC----CCCCccchhHHHHHHHHHHHhCCCCCCcccC
Q 042568 830 CANDSMSFTSTDGLLCGSVGYIAPEYGMG----KRASTHGDVYSFGVLLLEIVTGRRPTDVLFH 889 (983)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~k~Dv~SlG~il~elltg~~p~~~~~~ 889 (983)
....-.|-..|||||.+.. ..|+-|+||||+|+++.||.+++.||+..+.
T Consensus 204 ----------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 204 ----------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred ----------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 1112357788999998764 4789999999999999999999999986543
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.2e-30 Score=249.41 Aligned_cols=265 Identities=21% Similarity=0.375 Sum_probs=199.5
Q ss_pred hCCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCC--ceeE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKPD--FKAL 741 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~~l 741 (983)
.++|++.+++|+|.|++||.|. ..+.++++||+++.. ..+.+.+|+.|++.++ ||||+++++...++. ...+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 3567788899999999999999 557889999999533 3577899999999997 999999999997664 5579
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC-CCEEEcccccccc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED-LTALVADFGIAKL 820 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~-~~~kl~Dfgla~~ 820 (983)
|+||+.+.+...... .++...+..++.++++||+|+|+.| |+|||+||.|+++|.. ..++++|||+|.+
T Consensus 113 iFE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred HhhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhh
Confidence 999998866654432 4677788999999999999999997 9999999999999954 5789999999999
Q ss_pred ccCCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
+.+..+. ...+.+..|.-||.+-. ..|+..-|+|||||++..|+..+.|| |++.....+.++
T Consensus 183 YHp~~eY--------------nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepF---FhG~dN~DQLVk 245 (338)
T KOG0668|consen 183 YHPGKEY--------------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF---FHGHDNYDQLVK 245 (338)
T ss_pred cCCCcee--------------eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcc---cCCCCCHHHHHH
Confidence 9865432 23467778899998765 55788899999999999999999998 344444444443
Q ss_pred hh--------------CCCCCcHHHHHHHhhcCCCCCccccccch-HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 900 RH--------------YPHRLDPIVEKAIAKYAPQHMPIYYNKVW-SDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 900 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.. +.-.+++.++..+................ .-..++.++++.+.+.+|-.+|||++|.+.|
T Consensus 246 IakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 246 IAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 21 11123333333222211111100000000 1134789999999999999999999999875
No 393
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=4.1e-30 Score=272.27 Aligned_cols=220 Identities=21% Similarity=0.209 Sum_probs=174.4
Q ss_pred CCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcccccccc
Q 042568 678 GRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSLENHLY 756 (983)
Q Consensus 678 G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 756 (983)
|.+|.||++... +++.||+|.+.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence 899999999964 68889999986432 23345555556679999999999999999999999999999999886
Q ss_pred cccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCc
Q 042568 757 PSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMS 836 (983)
Q Consensus 757 ~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~ 836 (983)
.. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++|||.+.......
T Consensus 78 ~~----~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----------- 139 (237)
T cd05576 78 KF----LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----------- 139 (237)
T ss_pred Hh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccccc-----------
Confidence 43 34899999999999999999999986 9999999999999999999999999886554211
Q ss_pred cccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhh
Q 042568 837 FTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAK 916 (983)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 916 (983)
....++..|+|||...+..++.++||||+|+++|||++|+.|++..... . ..
T Consensus 140 -----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~--------~~ 191 (237)
T cd05576 140 -----DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------I--------NT 191 (237)
T ss_pred -----ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------c--------cc
Confidence 1124567899999998888899999999999999999999886421100 0 00
Q ss_pred cCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 042568 917 YAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSML 956 (983)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 956 (983)
......+ .....++.+++.+|++.||++||++.
T Consensus 192 ~~~~~~~-------~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 192 HTTLNIP-------EWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred ccccCCc-------ccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 0000011 11346788999999999999999973
No 394
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-30 Score=284.32 Aligned_cols=243 Identities=23% Similarity=0.217 Sum_probs=193.7
Q ss_pred hCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 743 (983)
++.|.....+|.|+|+.|-.+.. .+++..|||++.... .+-.+|+.++... +||||+++.+.+.+..+.|+||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc-----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 45666777899999999999885 467889999996552 3345677776665 7999999999999999999999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEe-CCCCCEEEcccccccccc
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILL-DEDLTALVADFGIAKLVK 822 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl-~~~~~~kl~Dfgla~~~~ 822 (983)
|.+.++-+.+.+... +.....+..|+.+|+.|+.|||++| |||||+||+|||+ ++.+.++|+|||.++...
T Consensus 396 e~l~g~ell~ri~~~-----~~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSK-----PEFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred hhccccHHHHHHHhc-----chhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 999998887766532 2223678889999999999999997 9999999999999 589999999999998765
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
+.. .+.+=|..|.|||+.....|++++|+||||+++|+|++|+.||..-..+ .
T Consensus 468 ~~~----------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~------- 520 (612)
T KOG0603|consen 468 RSC----------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----I------- 520 (612)
T ss_pred hhh----------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----H-------
Confidence 431 1124578899999999999999999999999999999999998743221 1
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGR 964 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 964 (983)
.+...+..... -...+.++.+|+.+|++.||.+||+|+++..+=..
T Consensus 521 ------ei~~~i~~~~~----------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 521 ------EIHTRIQMPKF----------SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ------HHHHhhcCCcc----------ccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 11111111100 02366789999999999999999999999987666
No 395
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-30 Score=269.25 Aligned_cols=241 Identities=24% Similarity=0.318 Sum_probs=188.8
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 742 (983)
.+|....+||+|+||.|..|..+ +.+.+|||++++.. +.+..+--+.|-+++.-. +-|.++++..+|+..+..|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46888999999999999999866 45669999997653 222334445566666655 578999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|||+.||+|-.+++... ++.+..+.-+|..||-||-|||++| |+.||+|.+|||+|.+|.+||+|||+++.-.
T Consensus 429 MEyvnGGDLMyhiQQ~G----kFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVG----KFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEecCchhhhHHHHhc----ccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccc
Confidence 99999999998887654 4666778889999999999999997 9999999999999999999999999997422
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
- ...++.+.+||+.|+|||.+...+|+..+|.|||||++|||+.|+.||+.. +...+
T Consensus 502 ~-------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe--DE~el-------- 558 (683)
T KOG0696|consen 502 F-------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE--DEDEL-------- 558 (683)
T ss_pred c-------------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC--CHHHH--------
Confidence 1 123456689999999999999999999999999999999999999999753 21111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP 953 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 953 (983)
+......... .| ...+.+.+.+....+...|.+|.
T Consensus 559 -------F~aI~ehnvs--yP-------KslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 559 -------FQAIMEHNVS--YP-------KSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -------HHHHHHccCc--Cc-------ccccHHHHHHHHHHhhcCCcccc
Confidence 1111111110 01 23556777777778888888884
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.7e-30 Score=289.76 Aligned_cols=248 Identities=30% Similarity=0.401 Sum_probs=189.2
Q ss_pred CCCCCccccCCcEe-EEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEEEecc
Q 042568 669 FCPSSLIGSGRFGH-VYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 669 f~~~~~iG~G~~g~-Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
|...+++|.|+.|+ ||+|... |+.||||++- .+......+|+..++.- +|||||++++.-.+..+.||..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll----~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLL----EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHh----hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 44556789999874 7999986 8899999883 23345678999999987 6999999999999999999999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC---C--CCEEEccccccccc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE---D--LTALVADFGIAKLV 821 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~---~--~~~kl~Dfgla~~~ 821 (983)
. .+|+++++..............+.+..|+++||++||+.+ |||||+||.|||++. + .+++|+|||+++.+
T Consensus 586 ~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 A-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred h-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 6 5999999864111111121456788999999999999975 999999999999975 3 57899999999998
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhC-CCCCCcccCCCCchHHHHHh
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTG-RRPTDVLFHDGSSLHEWVKR 900 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg-~~p~~~~~~~~~~l~~~~~~ 900 (983)
....... .......||.||+|||++....-+..+||||+||++|+.++| .+||......+.++ +..
T Consensus 662 ~~~~sS~----------~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI---l~~ 728 (903)
T KOG1027|consen 662 AGGKSSF----------SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI---LTG 728 (903)
T ss_pred CCCcchh----------hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhh---hcC
Confidence 7655442 123456799999999999998888899999999999999996 89986432211110 000
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
... ... -....++ +..+||.+|+..+|..||++.+|+.
T Consensus 729 ----------------~~~--L~~--L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 729 ----------------NYT--LVH--LEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ----------------ccc--eee--eccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 000 000 0001223 8899999999999999999999994
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=4.2e-29 Score=284.92 Aligned_cols=270 Identities=20% Similarity=0.222 Sum_probs=183.6
Q ss_pred HhCCCCCCCccccCCcEeEEEEEE-----------------CCCcEEEEEEeecccCcc-------------hhHHHHHH
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVL-----------------QDNTRIAVKVLDLTTTGE-------------ITGSFKRE 714 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~-----------------~~~~~vAvK~~~~~~~~~-------------~~~~~~~E 714 (983)
..++|.+.++||+|+||.||+|.. ..++.||||+++...... ..+.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356899999999999999999964 235679999986543221 11234457
Q ss_pred HHHHHhcCCCCc-----cceeeEEec--------CCceeEEEecccCcccccccccccC--------------------c
Q 042568 715 CQILKRIRHRNL-----IRIITICSK--------PDFKALVLPLMSNGSLENHLYPSHG--------------------L 761 (983)
Q Consensus 715 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~ 761 (983)
+.++.+++|.++ ++++++|.. .+..++||||+++++|.++++...+ .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888876654 677777743 3567999999999999998864321 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCcccccc
Q 042568 762 SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTD 841 (983)
Q Consensus 762 ~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~ 841 (983)
...+++..++.++.|+++||.|+|+.+ |+||||||+||+++.++.+||+|||++..+..... ...
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~------------~~~ 367 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN------------FNP 367 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc------------cCc
Confidence 123578889999999999999999986 99999999999999999999999999975532111 011
Q ss_pred CccccccccccccccCCCC--------------------C--CccchhHHHHHHHHHHHhCCC-CCCcccCCCCchHHHH
Q 042568 842 GLLCGSVGYIAPEYGMGKR--------------------A--STHGDVYSFGVLLLEIVTGRR-PTDVLFHDGSSLHEWV 898 (983)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~--------------------~--~~k~Dv~SlG~il~elltg~~-p~~~~~~~~~~l~~~~ 898 (983)
....+|+.|+|||.+.... + ..+.||||+||++|+|++|.. ||.....-...+..
T Consensus 368 ~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~-- 445 (507)
T PLN03224 368 LYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ-- 445 (507)
T ss_pred cccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh--
Confidence 1123578999999875422 1 235799999999999999885 65422100000000
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCC---CCCCCHHHHHHHH
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNP---STRPSMLDVAHEM 962 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPs~~evl~~L 962 (983)
+ ........ ...... +....+........+++.+++..+| .+|+|++|+++|-
T Consensus 446 ---~----~~~~~~~r-~~~~~~---~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 446 ---Y----DNDLNRWR-MYKGQK---YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred ---c----cchHHHHH-hhcccC---CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 0 00000000 000000 0111234456788999999998766 6899999999863
No 398
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-29 Score=252.59 Aligned_cols=247 Identities=22% Similarity=0.335 Sum_probs=194.5
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeeccc--CcchhHHHHHHHHHHHhc-CCCCccceeeEEecCCceeEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTT--TGEITGSFKRECQILKRI-RHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 742 (983)
++|....+||+|+|++|-.+++. +.+.+|+|+++++- ..+...=...|-.+..+. +||.+|.+..+|..+...++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 57888999999999999999955 67779999997653 233344455676776666 799999999999999999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
.||++||+|--+++. .++++++.++-+...|.-||.|||++| |+.||+|.+|||+|..|.+|++|+|+++.--
T Consensus 330 ieyv~ggdlmfhmqr----qrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQR----QRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEecCcceeeehhh----hhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999877765 456999999999999999999999997 9999999999999999999999999997432
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccC--CCCchHHHHHh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFH--DGSSLHEWVKR 900 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~--~~~~l~~~~~~ 900 (983)
.. ...+.+++||+.|.|||.+.+..|+..+|.|++||+++||+.|+.||+...- .+..-.++.-+
T Consensus 403 ~~-------------gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq 469 (593)
T KOG0695|consen 403 GP-------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ 469 (593)
T ss_pred CC-------------CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH
Confidence 21 1334567999999999999999999999999999999999999999985432 22222233222
Q ss_pred hCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC
Q 042568 901 HYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP 953 (983)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 953 (983)
. ++++.+. .| ...+.+...++..-+..||.+|.
T Consensus 470 v-------ilekqir------ip-------rslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 470 V-------ILEKQIR------IP-------RSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred H-------Hhhhccc------cc-------ceeehhhHHHHHHhhcCCcHHhc
Confidence 1 1222111 11 11334556667778899999885
No 399
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=6.1e-29 Score=291.78 Aligned_cols=270 Identities=19% Similarity=0.157 Sum_probs=168.5
Q ss_pred HhCCCCCCCccccCCcEeEEEEEEC-C----CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeE------E
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQ-D----NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITI------C 733 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~----~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~ 733 (983)
..++|...+.||+|+||.||+|.+. + +..||||++...... +.+..| .++...+.+++.++.. .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~---e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV---EIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh---HHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 4568999999999999999999965 4 688999987532211 111111 1122222223222221 2
Q ss_pred ecCCceeEEEecccCcccccccccccCc----------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecC
Q 042568 734 SKPDFKALVLPLMSNGSLENHLYPSHGL----------------SHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDL 797 (983)
Q Consensus 734 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Di 797 (983)
......++||||+++++|.+++...... ........+..++.|+++||+|||+.+ |+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcC
Confidence 4556789999999999999887643210 001123446689999999999999986 999999
Q ss_pred CCCCeEeCC-CCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCC-----------------
Q 042568 798 KPSNILLDE-DLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK----------------- 859 (983)
Q Consensus 798 kp~NiLl~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------- 859 (983)
||+|||++. ++.+||+|||+|+.+..... .......||+.|+|||.+...
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~------------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp 349 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGIN------------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSP 349 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccc------------cCCcccccCCCccChHHhhccCCCCCCccccccccccc
Confidence 999999986 57999999999986542211 112235789999999964321
Q ss_pred -----CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc-HHHHHHHhhcCCCCCccccccchHHH
Q 042568 860 -----RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD-PIVEKAIAKYAPQHMPIYYNKVWSDV 933 (983)
Q Consensus 860 -----~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (983)
.++.++||||+||++|||+++..|++. ....+.........+ ......+...........+ ...+..
T Consensus 350 ~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~ 422 (566)
T PLN03225 350 VLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS------NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGF-EVLDLD 422 (566)
T ss_pred hhccccCCCCcccHHHHHHHHHHHhCcCCCch------HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhh-hhcccc
Confidence 234567999999999999998776532 111111111000000 0000000000000000000 000111
Q ss_pred HHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 934 VLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 934 ~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.....+|+.+|++.||++|||++|+++|
T Consensus 423 ~~~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 423 GGAGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred chHHHHHHHHHccCCcccCCCHHHHhCC
Confidence 2345689999999999999999999986
No 400
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.7e-30 Score=269.14 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=200.8
Q ss_pred CCCccccCCcEeEEEEEECCCc-EEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 671 PSSLIGSGRFGHVYKGVLQDNT-RIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~~~~~-~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
....||-||||.|=.++..... .+|+|++++.. ..+..+....|-.+|...+.|.||++|..|.+....|+.||-|=
T Consensus 424 ~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaCl 503 (732)
T KOG0614|consen 424 RIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACL 503 (732)
T ss_pred hhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhc
Confidence 3567999999999999866443 38888875542 22345678889999999999999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
||.+...+.+ +..++..+..-++..+++|++|||.++ ||.||+||+|.++|.+|-+||.|||.|+.+...
T Consensus 504 GGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g--- 573 (732)
T KOG0614|consen 504 GGELWTILRD----RGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG--- 573 (732)
T ss_pred Cchhhhhhhh----cCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccC---
Confidence 9999999976 345888889999999999999999996 999999999999999999999999999987643
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
..+.+++||+.|.|||.+..+..+..+|.||+|+++||+++|.+||... +.......+.
T Consensus 574 -----------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~--dpmktYn~IL-------- 632 (732)
T KOG0614|consen 574 -----------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV--DPMKTYNLIL-------- 632 (732)
T ss_pred -----------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC--chHHHHHHHH--------
Confidence 2334579999999999999999999999999999999999999999742 2221111111
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHHHHH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPS-----MLDVAHEMG 963 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~L~ 963 (983)
+.+... ..| ..+.+...+++.+.++.+|.+|.- +.|+.+|-+
T Consensus 633 ----kGid~i---~~P-------r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 633 ----KGIDKI---EFP-------RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred ----hhhhhh---hcc-------cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 111111 111 125567889999999999999975 788887765
No 401
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.9e-28 Score=260.41 Aligned_cols=239 Identities=27% Similarity=0.348 Sum_probs=191.6
Q ss_pred CcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccccccccc
Q 042568 679 RFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSLENHLYP 757 (983)
Q Consensus 679 ~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 757 (983)
+||.||+|... +++.+|+|++.........+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48899999997655443367899999999999999999999999988999999999999999998864
Q ss_pred ccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCcc
Q 042568 758 SHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSF 837 (983)
Q Consensus 758 ~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~ 837 (983)
.. .+++..++.++.+++++++|||+.+ ++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~----~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------------ 141 (244)
T smart00220 81 RG----RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG------------ 141 (244)
T ss_pred cc----CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc------------
Confidence 32 2889999999999999999999985 9999999999999999999999999998765321
Q ss_pred ccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhc
Q 042568 838 TSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKY 917 (983)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 917 (983)
......++..|++||...+..++.++||||+|++++++++|..||+... +. . ...+......
T Consensus 142 --~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-~~---~------------~~~~~~~~~~ 203 (244)
T smart00220 142 --LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-QL---L------------ELFKKIGKPK 203 (244)
T ss_pred --ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-cH---H------------HHHHHHhccC
Confidence 1122457889999999988888999999999999999999999986421 10 1 1111111110
Q ss_pred CCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 918 APQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
... ...+.....++.+++.+|+..+|++||++.++++
T Consensus 204 ~~~------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 204 PPF------PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CCC------ccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 100 0000114467899999999999999999999987
No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-29 Score=248.69 Aligned_cols=271 Identities=20% Similarity=0.274 Sum_probs=194.2
Q ss_pred CCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCc-chhHHHHHHHHHHHhcCCCCccceeeEEecCC-----ceeEE
Q 042568 670 CPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTG-EITGSFKRECQILKRIRHRNLIRIITICSKPD-----FKALV 742 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 742 (983)
+..+.||-|+||+||.+.+ ++|++||.|++...... ...+++.+|++++...+|.|++..++....+. +.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 3567899999999999985 47999999988543322 24678999999999999999999998875443 56788
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
+|.|.. +|.+.+-. ...++...+.-+.+||++||.|||+.+ |.||||||.|+|++.+...||||||+|+...
T Consensus 136 TELmQS-DLHKIIVS----PQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 136 TELMQS-DLHKIIVS----PQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHh-hhhheecc----CCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccc
Confidence 898864 67666643 445888899999999999999999995 9999999999999999999999999999765
Q ss_pred CCcccccccCCCCccccccCccccccccccccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh
Q 042568 823 GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG-KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH 901 (983)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~ 901 (983)
..+. ..+...+-|..|+|||.++| +.|+..+||||+|||+.|++..+.-|....+ -..-+++.+.
T Consensus 208 ~d~~------------~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P--iqQL~lItdL 273 (449)
T KOG0664|consen 208 QRDR------------LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP--IEQLQMIIDL 273 (449)
T ss_pred hhhh------------hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh--HHHHHHHHHH
Confidence 4332 22233467899999999998 5689999999999999999998887753211 0111222222
Q ss_pred CCCCCcHHHHHHHhhc---------CCCCCcccccc-chHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 902 YPHRLDPIVEKAIAKY---------APQHMPIYYNK-VWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 902 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
....-.+.......+. .....+..+.- .-.+.-.+...+...++..||.+|.+..+.+.+.
T Consensus 274 LGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 274 LGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1111111111111110 11111111110 1122345667788889999999999999988765
No 403
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.3e-28 Score=265.90 Aligned_cols=215 Identities=24% Similarity=0.282 Sum_probs=174.0
Q ss_pred CCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeeccc--CcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 668 GFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTT--TGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
-|...+.||-|+||+|.+++ .++...||+|.+.+.. ........+.|-.||.....+-||++|..|.+.+..|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 47778889999999999998 5556678999885432 12245678889999999999999999999999999999999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|++||++-.+|... ..+.+..++-++..+..|+++.|..| +|||||||+|||||.+|.+||+|||+++-+.-.
T Consensus 710 YIPGGDmMSLLIrm----gIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRM----GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred ccCCccHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceec
Confidence 99999998887643 34788888889999999999999997 999999999999999999999999998754221
Q ss_pred ccccc------ccCCCCcc-----------------------ccccCccccccccccccccCCCCCCccchhHHHHHHHH
Q 042568 825 DESVN------CANDSMSF-----------------------TSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLL 875 (983)
Q Consensus 825 ~~~~~------~~~~~~~~-----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ 875 (983)
+.... ...+++.. .......+||+.|+|||++....++..+|.||.|||+|
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 11100 00011111 11223358999999999999999999999999999999
Q ss_pred HHHhCCCCCCcccC
Q 042568 876 EIVTGRRPTDVLFH 889 (983)
Q Consensus 876 elltg~~p~~~~~~ 889 (983)
||+.|+.||.....
T Consensus 863 em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTP 876 (1034)
T ss_pred HHhhCCCCccCCCC
Confidence 99999999965443
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=1.5e-28 Score=257.23 Aligned_cols=287 Identities=26% Similarity=0.353 Sum_probs=208.1
Q ss_pred HHHHhCCCCCCCccccCCcEeEEEEEEC----CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceeeEEecC
Q 042568 662 LIEATGGFCPSSLIGSGRFGHVYKGVLQ----DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIITICSKP 736 (983)
Q Consensus 662 l~~~~~~f~~~~~iG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 736 (983)
+....+.|...++||+|.|++||++.+. ..+.||+|.+...... .+...|++++..+ -+.||+++.+++...
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 3445567888999999999999999854 3567999999766544 6789999999999 589999999999999
Q ss_pred CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC-CCCEEEccc
Q 042568 737 DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE-DLTALVADF 815 (983)
Q Consensus 737 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~-~~~~kl~Df 815 (983)
+...+|+||++.....++.. .++...+..+++.+.+||+++|..| ||||||||+|++.+. .+.-.|.||
T Consensus 108 d~v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDF 177 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDF 177 (418)
T ss_pred CeeEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEec
Confidence 99999999999977777664 3667889999999999999999997 999999999999984 567889999
Q ss_pred cccccccCCcccccccC------------------------C-------CCccccccCccccccccccccccCCC-CCCc
Q 042568 816 GIAKLVKGIDESVNCAN------------------------D-------SMSFTSTDGLLCGSVGYIAPEYGMGK-RAST 863 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~------------------------~-------~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ 863 (983)
|+|..+........... . ...........+||+||+|||++... ..++
T Consensus 178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt 257 (418)
T KOG1167|consen 178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT 257 (418)
T ss_pred hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence 99984322110000000 0 00001122335799999999998764 5688
Q ss_pred cchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhh----------CCCC--Cc------HHHH------HH-HhhcC
Q 042568 864 HGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRH----------YPHR--LD------PIVE------KA-IAKYA 918 (983)
Q Consensus 864 k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~----------~~~~--~~------~~~~------~~-~~~~~ 918 (983)
++||||.|||++-+++++.||-....+-..+.+.+... .+.. +. ...+ .. +....
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~ 337 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY 337 (418)
T ss_pred ccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence 99999999999999999999966555544444443210 0111 00 0001 00 11111
Q ss_pred CCCCccccccchHHHHH-HHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 919 PQHMPIYYNKVWSDVVL-ELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 919 ~~~~~~~~~~~~~~~~~-~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..+.+......|.++.. .+++++.+|+..||.+|.|++|.++|
T Consensus 338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 11111234445555554 89999999999999999999999964
No 405
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-27 Score=241.25 Aligned_cols=266 Identities=23% Similarity=0.264 Sum_probs=196.2
Q ss_pred hCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCC------
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPD------ 737 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 737 (983)
..+|.....+|.|+- .|-.|.+ -.++.||+|....+.. ....++..+|...+..++|+||++++.++....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456777888999998 4545543 3688999998755422 224577889999999999999999999996443
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGI 817 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgl 817 (983)
..|+|||+|. .+|.+.+.. .++-.++..|..|++.|+.|||+.+ |+|||+||+||++..++.+||.|||+
T Consensus 95 e~y~v~e~m~-~nl~~vi~~------elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILM------ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHH------hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchh
Confidence 5689999996 488777652 3677889999999999999999996 99999999999999999999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHH
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEW 897 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~ 897 (983)
|+..... -....++.|..|+|||++.+..+.+.+||||+||++.||++|+.-|. ++..+.+|
T Consensus 165 ar~e~~~--------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~ 226 (369)
T KOG0665|consen 165 ARTEDTD--------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQW 226 (369)
T ss_pred hcccCcc--------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHH
Confidence 9854321 12344789999999999999999999999999999999999998753 45556666
Q ss_pred HHhhCC-CCCcHHHHHHHhh--------------------cCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 042568 898 VKRHYP-HRLDPIVEKAIAK--------------------YAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSML 956 (983)
Q Consensus 898 ~~~~~~-~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 956 (983)
.+..-. +..++.+-..+.. ..+...+...+.. .-....+.+++.+|+..+|++|.|++
T Consensus 227 ~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~-~~~~~~ardll~~MLvi~pe~Risv~ 305 (369)
T KOG0665|consen 227 NKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGS-KLDCSLARDLLSKMLVIDPEKRISVD 305 (369)
T ss_pred HHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCC-ccchHHHHHHHHHhhccChhhcccHH
Confidence 543211 1111111111000 0000001000000 11344578999999999999999999
Q ss_pred HHHHH
Q 042568 957 DVAHE 961 (983)
Q Consensus 957 evl~~ 961 (983)
++++|
T Consensus 306 daL~H 310 (369)
T KOG0665|consen 306 DALRH 310 (369)
T ss_pred HHhcC
Confidence 99975
No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=8.7e-28 Score=258.10 Aligned_cols=197 Identities=24% Similarity=0.394 Sum_probs=168.4
Q ss_pred CCCCCCCccccCCcEeEEEEEECC-CcEEEEEEeecccCc-------chhHHHHHHHHHHHhcC---CCCccceeeEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQD-NTRIAVKVLDLTTTG-------EITGSFKRECQILKRIR---HRNLIRIITICSK 735 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~-------~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 735 (983)
.+|+..+.+|+|+||.|+.|.++. ...|+||.+.++..= ......-.|++||..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 458889999999999999999774 455899998665321 11233556999999997 9999999999999
Q ss_pred CCceeEEEecc-cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcc
Q 042568 736 PDFKALVLPLM-SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVAD 814 (983)
Q Consensus 736 ~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~D 814 (983)
.++.|++||-. ++-+|.+++.. ++.+++.++.-|++||+.|+++||+++ |||||||-+||.++.+|-+||+|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEee
Confidence 99999999976 45577788764 567999999999999999999999997 99999999999999999999999
Q ss_pred ccccccccCCcccccccCCCCccccccCccccccccccccccCCCCC-CccchhHHHHHHHHHHHhCCCCCC
Q 042568 815 FGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRA-STHGDVYSFGVLLLEIVTGRRPTD 885 (983)
Q Consensus 815 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~SlG~il~elltg~~p~~ 885 (983)
||.|..... .+..+++||.+|.|||++.|.+| +..-|||++|+++|.++....||.
T Consensus 714 fgsaa~~ks---------------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKS---------------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcC---------------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999876542 44556799999999999999887 466799999999999999998874
No 407
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.6e-26 Score=241.82 Aligned_cols=132 Identities=26% Similarity=0.468 Sum_probs=112.3
Q ss_pred hCCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-----C---CCccceeeEEe--
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-----H---RNLIRIITICS-- 734 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~-- 734 (983)
.++|.+.++||=|.|++||++.+ .+.+.||+|+.+.. +...+....||+++++++ | .+||+++++|.
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA--QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 47899999999999999999984 46778999998643 335677889999999984 2 47999999994
Q ss_pred --cCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEe
Q 042568 735 --KPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILL 804 (983)
Q Consensus 735 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl 804 (983)
...+.+||+|++ |.+|..++.... -+.++...+.+|++||+.||.|||.++ +|||-||||+|||+
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~--YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSN--YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhC--CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 345889999999 568888886543 467999999999999999999999998 79999999999999
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.1e-25 Score=233.33 Aligned_cols=212 Identities=31% Similarity=0.545 Sum_probs=182.4
Q ss_pred cccCCcEeEEEEEECC-CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCccccc
Q 042568 675 IGSGRFGHVYKGVLQD-NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSLEN 753 (983)
Q Consensus 675 iG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 753 (983)
||+|++|.||++.... ++.+++|++...........+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999764 889999999765443245789999999999999999999999999899999999999999999
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC-CCCEEEccccccccccCCcccccccC
Q 042568 754 HLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE-DLTALVADFGIAKLVKGIDESVNCAN 832 (983)
Q Consensus 754 ~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~-~~~~kl~Dfgla~~~~~~~~~~~~~~ 832 (983)
++.... ..+++..++.++.+++++++|||+.+ ++|+||+|.||+++. ++.++|+|||.+........
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~------ 148 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS------ 148 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc------
Confidence 886431 35899999999999999999999996 999999999999999 89999999999986653211
Q ss_pred CCCccccccCccccccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHH
Q 042568 833 DSMSFTSTDGLLCGSVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVE 911 (983)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 911 (983)
......+...|++||..... .++.+.|+|++|++++++
T Consensus 149 -------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------- 187 (215)
T cd00180 149 -------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------- 187 (215)
T ss_pred -------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------
Confidence 11123578899999998887 788999999999999999
Q ss_pred HHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 912 KAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
..+.+++.+|++.+|++||++.++++++
T Consensus 188 -----------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2467788889999999999999998753
No 409
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=1.1e-26 Score=246.35 Aligned_cols=207 Identities=24% Similarity=0.288 Sum_probs=172.0
Q ss_pred CCCHHHHHHHhCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcC------CCCccc
Q 042568 656 RVSYKQLIEATGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIR------HRNLIR 728 (983)
Q Consensus 656 ~~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~ 728 (983)
++.+.++ ..++|.+....|+|-|++|-+|... .|..||||++.... ...+.=.+|++||++|+ .-|+++
T Consensus 423 rv~igE~--LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE--~M~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 423 RVRIGEL--LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE--VMHKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred EEehhhh--hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch--HHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 3444444 3468988999999999999999965 57899999995432 23466678999999995 348999
Q ss_pred eeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC-
Q 042568 729 IITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED- 807 (983)
Q Consensus 729 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~- 807 (983)
++..|....+.+||+|-+. -+|.+.+.+... ...+....+..++.|+.-||..|-..+ |+|.||||+|||+++.
T Consensus 499 l~r~F~hknHLClVFE~Ls-lNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 499 LFRHFKHKNHLCLVFEPLS-LNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESK 573 (752)
T ss_pred HHHHhhhcceeEEEehhhh-chHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCc
Confidence 9999999999999999885 588888876543 567889999999999999999999886 9999999999999865
Q ss_pred CCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 042568 808 LTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDV 886 (983)
Q Consensus 808 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~ 886 (983)
..+||||||.|......+ ...+.-+..|+|||.+.|-+|+...|+||+||++||+.||+.-|-+
T Consensus 574 ~iLKLCDfGSA~~~~ene---------------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 574 NILKLCDFGSASFASENE---------------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred ceeeeccCcccccccccc---------------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 567999999998776432 1224566789999999999999999999999999999999998743
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=6e-27 Score=255.98 Aligned_cols=252 Identities=22% Similarity=0.346 Sum_probs=197.1
Q ss_pred CCCCCCCccccCCcEeEEEEEE-CCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVL-QDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
++|.....+|+|+||.|||+++ .+++..|||+++..... ..+-..+|+-+++..+||||+.+++.|...+..+++|||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d-d~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD-DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCc-cccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 4566788999999999999995 47888999999877543 567788899999999999999999999999999999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
|.+|+|++.-+. ..++++.++..+++..++|++|||+.| -+|||||-.||++++.|.+|+.|||.+..+...
T Consensus 94 cgggslQdiy~~----TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitat- 165 (829)
T KOG0576|consen 94 CGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITAT- 165 (829)
T ss_pred cCCCcccceeee----cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhh-
Confidence 999999997764 457899999999999999999999997 789999999999999999999999998755421
Q ss_pred ccccccCCCCccccccCccccccccccccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM---GKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
-.......||+.|||||+.. .+.|..++|||+.|++..|+-.-+.|.... ..+......
T Consensus 166 ------------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl----hpmr~l~Lm-- 227 (829)
T KOG0576|consen 166 ------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL----HPMRALFLM-- 227 (829)
T ss_pred ------------hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc----chHHHHHHh--
Confidence 12234468999999999864 467899999999999999999988884321 111111111
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
.+...+.........|.+.+.+ ++..|+..+|++||+++.+++
T Consensus 228 ------------TkS~~qpp~lkDk~kws~~fh~---fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 228 ------------TKSGFQPPTLKDKTKWSEFFHN---FVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ------------hccCCCCCcccCCccchHHHHH---HHHHHhcCCCccCCChhhhee
Confidence 0001111111112245555444 555699999999999998875
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=5.2e-25 Score=231.14 Aligned_cols=200 Identities=31% Similarity=0.440 Sum_probs=171.0
Q ss_pred CCCCCccccCCcEeEEEEEECC-CcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEeccc
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQD-NTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
|...+.||+|++|.||+|...+ ++.+|+|.+.........+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567889999999999999764 888999999765443346789999999999999999999999999899999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+++|.+++.... ..+++..+..++.+++.++.|||+.+ ++|+|++|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~- 153 (225)
T smart00221 81 GGDLFDYLRKKG---GKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA- 153 (225)
T ss_pred CCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-
Confidence 999999887532 11789999999999999999999995 99999999999999999999999999987653320
Q ss_pred ccccCCCCccccccCcccccccccccccc-CCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYG-MGKRASTHGDVYSFGVLLLEIVTGRRPTDV 886 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~k~Dv~SlG~il~elltg~~p~~~ 886 (983)
.......++..|++||.. ....++.++|||+||++++||++|+.||+.
T Consensus 154 -----------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 -----------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred -----------ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 011224578899999998 666778899999999999999999999854
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=1.8e-27 Score=245.34 Aligned_cols=405 Identities=22% Similarity=0.230 Sum_probs=254.8
Q ss_pred CCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEeccC-cccccccCCcccccCCCcccce
Q 042568 102 SLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGN-NKLVGEIPIPIFCSNSSTSLQY 180 (983)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~~~~l~~L~~ 180 (983)
.-++++|..|.|+...|..|+.+++|+.||||+|+|+.+-|.+|..|.+|.+|-+-+ |+|+ .+|...|
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F---------- 136 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAF---------- 136 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHh----------
Confidence 456789999999966666899999999999999999999999999999888876665 8887 5665544
Q ss_pred eecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceecccccccccccchhhhcCCCCccEEEcccc
Q 042568 181 IDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYN 260 (983)
Q Consensus 181 L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N 260 (983)
.+|..|+.|.+.-|++.-+..++|..+++|..|.+-+|.+. .++...+..+..++.+++..|
T Consensus 137 -----------------~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~n 198 (498)
T KOG4237|consen 137 -----------------GGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQN 198 (498)
T ss_pred -----------------hhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcC
Confidence 45666666666666666666666666666666666666665 566656666666666666666
Q ss_pred ccccCCCCCCCcc----cccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCC-CCCCCCcccE
Q 042568 261 DFVSHDGNTNLEP----FFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPP-HISNLVNLTL 335 (983)
Q Consensus 261 ~l~~~~~~~~~~~----~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~ 335 (983)
.+...-...++.. .+..++...-..-..+.++++...-+..+......+..=-.+.+...+..|. .|..+++|+.
T Consensus 199 p~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ 278 (498)
T KOG4237|consen 199 PFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRK 278 (498)
T ss_pred ccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceE
Confidence 6443322111111 1112222223333334444444333333332211111111122222223332 4677888888
Q ss_pred EeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhcccCccC
Q 042568 336 LNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHL 415 (983)
Q Consensus 336 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 415 (983)
|+|++|+++++-+.+|.++..++.|+|..|+|..+-...|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|.+
T Consensus 279 lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 279 LNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred eccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 88888888888888888888888888888888877777788888888888888888888888888888888888888876
Q ss_pred CCCC-----ccccc-----------CCCCCCEEEccCccccC---cCCccccCCCccceeccccCCCCCCCCcccccccc
Q 042568 416 SGTI-----PSSLG-----------KCVNLEILDLSHNKISG---IIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMD 476 (983)
Q Consensus 416 ~~~~-----p~~l~-----------~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~ 476 (983)
.-.- .+++. .-..++.+.++++.+.. ..|++.+... ++.-|.. .+
T Consensus 359 ~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~-------------s~~cP~~---c~ 422 (498)
T KOG4237|consen 359 NCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLT-------------SSPCPPP---CT 422 (498)
T ss_pred cCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCC-------------CCCCCCC---cc
Confidence 5210 01111 01123344444433321 1111111100 0111111 11
Q ss_pred ccc-cccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCccccCCcCccccCCCCcceEec
Q 042568 477 MVL-AIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSFQASPTLKQLNF 555 (983)
Q Consensus 477 ~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l 555 (983)
-+. ..-.|++.+. .+|..+.. ...+|++.+|.++ .+|.+ .+..| .+|+|+|+++..-...|.++++|.+|-+
T Consensus 423 c~~tVvRcSnk~lk-~lp~~iP~--d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlil 495 (498)
T KOG4237|consen 423 CLDTVVRCSNKLLK-LLPRGIPV--DVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLIL 495 (498)
T ss_pred hhhhhHhhcccchh-hcCCCCCc--hhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEE
Confidence 122 2233444444 66665543 5678888999988 56766 56777 8899999988666678888998888888
Q ss_pred cCC
Q 042568 556 SFN 558 (983)
Q Consensus 556 ~~N 558 (983)
++|
T Consensus 496 syn 498 (498)
T KOG4237|consen 496 SYN 498 (498)
T ss_pred ecC
Confidence 876
No 413
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=9.8e-26 Score=221.26 Aligned_cols=252 Identities=21% Similarity=0.293 Sum_probs=185.4
Q ss_pred CCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccceee-EEecCCceeEEE
Q 042568 667 GGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIRIIT-ICSKPDFKALVL 743 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~~~~~~lv~ 743 (983)
+.|.+.+.+|+|.||.+-.+.++ +.+.+|+|.++.+... .++|.+|..---.+ .|.||+.-|+ .|+..+..++++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt--~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT--QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh--HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 45677899999999999999976 5677999998766543 57888887654444 5899998876 467778889999
Q ss_pred ecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeC--CCCCEEEccccccccc
Q 042568 744 PLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLD--EDLTALVADFGIAKLV 821 (983)
Q Consensus 744 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~--~~~~~kl~Dfgla~~~ 821 (983)
||++.|+|..-+.. ..+-+....+++.|+++|+.|||++ ++||||||.+|||+- +..++|+||||..+..
T Consensus 102 E~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred ccCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccccc
Confidence 99999999988764 4477788899999999999999999 599999999999983 3458999999998755
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCC-----CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHH
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK-----RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~ 896 (983)
+. ......-+..|-+||..... .+.+.+|||.||+++|.++||+.||....-.+..+.+
T Consensus 174 g~----------------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~ 237 (378)
T KOG1345|consen 174 GT----------------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWE 237 (378)
T ss_pred Cc----------------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHH
Confidence 42 11112345568899876542 3467899999999999999999999755444444444
Q ss_pred HHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 897 WVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
|..-.. +. ....|. .+.-....++++..+-+..+|++|--+-++.++.
T Consensus 238 ~~~w~~--rk------------~~~~P~----~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 238 WEQWLK--RK------------NPALPK----KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred HHHHhc--cc------------CccCch----hhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 433211 10 001111 1222456778888889999999995555544433
No 414
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=9.9e-24 Score=268.91 Aligned_cols=363 Identities=25% Similarity=0.259 Sum_probs=215.2
Q ss_pred CeEEEEEcccCCccc--ccccccccCCCCcEEeCcCCc------CCCCCccccCCCC-CCCEEeccCccCCCCchhhhcc
Q 042568 77 NKVVELDLSARSIYG--TISPALANLSSLIVLDLSKNF------FQGHIPAELGSLI-RLKQLSLSWNSLQGKIPSQLGS 147 (983)
Q Consensus 77 ~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~L~Ls~n~------l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~ 147 (983)
.+|..+.+.-..+.. .-+.++.++++|+.|.+..+. +...+|..+..++ +|+.|++.+|.+. .+|..| .
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~ 609 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-R 609 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-C
Confidence 345554443333321 123468889999999987654 3345777777764 6999999999987 888887 5
Q ss_pred cccccEEeccCcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCc
Q 042568 148 LHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKL 227 (983)
Q Consensus 148 L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 227 (983)
..+|++|+|++|++. .+|..+. .+++|+.|+|++|.....+|. ++.+++|++|+|++|.....+|..++++++|
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~---~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L 683 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVH---SLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSLVELPSSIQYLNKL 683 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccc---cCCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCccccchhhhccCCC
Confidence 789999999999987 6776653 678888888888765556763 5678888888888877666788888888888
Q ss_pred ceecccccccccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCcccccccc
Q 042568 228 EWLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLST 307 (983)
Q Consensus 228 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 307 (983)
+.|++++|...+.+|..+ .+++|+.|+|++|. ..+.+|.. +.
T Consensus 684 ~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~--------------------------------~L~~~p~~----~~ 725 (1153)
T PLN03210 684 EDLDMSRCENLEILPTGI--NLKSLYRLNLSGCS--------------------------------RLKSFPDI----ST 725 (1153)
T ss_pred CEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCC--------------------------------Cccccccc----cC
Confidence 888888764434666543 45566666665553 22222221 23
Q ss_pred CeeEEEccCccccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEcc
Q 042568 308 NLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLS 387 (983)
Q Consensus 308 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 387 (983)
+|++|++++|.+. .+|..+ .+++|++|++.++... .++..+ ....|..+...++|+.|+|+
T Consensus 726 nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~-~l~~~~----------------~~l~~~~~~~~~sL~~L~Ls 786 (1153)
T PLN03210 726 NISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSE-KLWERV----------------QPLTPLMTMLSPSLTRLFLS 786 (1153)
T ss_pred CcCeeecCCCccc-cccccc-cccccccccccccchh-hccccc----------------cccchhhhhccccchheeCC
Confidence 4555666666554 344433 4556666666553321 111000 00011111222344555555
Q ss_pred CccccCcCcccccCcccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCCCCC
Q 042568 388 KNKLSGSIPDSFANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGP 467 (983)
Q Consensus 388 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~ 467 (983)
+|...+.+|.+++++++|+.|++++|...+.+|..+ ++++|+.|++++|..-..+|.. ..+++. |+|++|.++ .
T Consensus 787 ~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~-L~Ls~n~i~-~ 860 (1153)
T PLN03210 787 DIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISD-LNLSRTGIE-E 860 (1153)
T ss_pred CCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCE-eECCCCCCc-c
Confidence 554444445555555555555555443223444433 4555556666555433334432 234443 666666665 4
Q ss_pred Ccccccccccccccccccc-ccccCCCcccccccccceEEeCCCc
Q 042568 468 LPLELSKMDMVLAIDLSFN-NLSGSIPPQLGSCIALESLNLSGNS 511 (983)
Q Consensus 468 ~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~ 511 (983)
+|.++..+++|+.|+|++| ++. .+|..+..+++|+.|++++|.
T Consensus 861 iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 861 VPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 5666666666666776663 344 566666677777777776663
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.9e-23 Score=266.34 Aligned_cols=341 Identities=20% Similarity=0.259 Sum_probs=250.7
Q ss_pred CCcccccccccceeecccCc------cccccchhhhccC-CcceecccccccccccchhhhcCCCCccEEEccccccccC
Q 042568 193 PLKNECELRNLRFLLLWSNR------LVGQVPQALANSS-KLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVSH 265 (983)
Q Consensus 193 p~~~~~~l~~L~~L~L~~N~------l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 265 (983)
....|.++++|+.|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|..+ ...+|++|+|++|++..
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f--~~~~L~~L~L~~s~l~~- 625 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF--RPENLVKLQMQGSKLEK- 625 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC--CccCCcEEECcCccccc-
Confidence 34456678888888886553 3345677777764 5888888888886 777664 46788888888887654
Q ss_pred CCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEEeccccccCC
Q 042568 266 DGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNG 345 (983)
Q Consensus 266 ~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 345 (983)
++..+..+++|+.|+|++|...+.+|. +..+ ++|+.|+|++|.....+|..+.++++|+.|++++|..-.
T Consensus 626 --------L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l-~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~ 695 (1153)
T PLN03210 626 --------LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMA-TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLE 695 (1153)
T ss_pred --------cccccccCCCCCEEECCCCCCcCcCCc-cccC-CcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcC
Confidence 234456788888888888765556664 4444 578888888887667888888888899999998876555
Q ss_pred CCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhcccCccCC-------CC
Q 042568 346 TIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHLS-------GT 418 (983)
Q Consensus 346 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-------~~ 418 (983)
.+|..+ ++++|+.|++++|...+.+|.. .++|+.|+|++|.+. .+|..+ .+++|+.|.+.++... ..
T Consensus 696 ~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l 769 (1153)
T PLN03210 696 ILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPL 769 (1153)
T ss_pred ccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhcccccccc
Confidence 677655 6888888998888766566643 457888889888886 456544 5777888877764321 11
Q ss_pred CcccccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCCCCCCccccccccccccccccccccccCCCccccc
Q 042568 419 IPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGS 498 (983)
Q Consensus 419 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 498 (983)
.+..+...++|+.|+|++|...+.+|..++++++|+. |++++|..-+.+|..+ .+++|+.|+|++|.....+|..
T Consensus 770 ~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~-L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~--- 844 (1153)
T PLN03210 770 TPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEH-LEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI--- 844 (1153)
T ss_pred chhhhhccccchheeCCCCCCccccChhhhCCCCCCE-EECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---
Confidence 2222333467888999888877788888888888886 8888876555677666 6888888999887655566653
Q ss_pred ccccceEEeCCCcccccccccccCCCCccEEecCCccccCCcCccccCCCCcceEeccCCc
Q 042568 499 CIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSFQASPTLKQLNFSFNK 559 (983)
Q Consensus 499 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~N~ 559 (983)
..+|+.|+|++|.++ .+|.++..+++|+.|+|++|+-...+|..+..+++|+.+++++|.
T Consensus 845 ~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 845 STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 357888899999888 578888888899999998854334688888888888888888874
No 416
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=1e-23 Score=212.20 Aligned_cols=170 Identities=18% Similarity=0.166 Sum_probs=127.2
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESV 828 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~ 828 (983)
|+|.+++... ...+++..++.|+.|+++||+|||+++ ||+||+++.++.+++ ||.++......
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc---
Confidence 5788888643 345999999999999999999999984 999999999999999 99988654211
Q ss_pred cccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcH
Q 042568 829 NCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDP 908 (983)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 908 (983)
..||+.|||||++.+..++.++|||||||++|||++|+.||.........+..+...
T Consensus 64 ---------------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~-------- 120 (176)
T smart00750 64 ---------------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNG-------- 120 (176)
T ss_pred ---------------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHH--------
Confidence 258899999999999999999999999999999999999986432111111111111
Q ss_pred HHHHHHhhcCCCCCccccccchHHHHH--HHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhh
Q 042568 909 IVEKAIAKYAPQHMPIYYNKVWSDVVL--ELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 968 (983)
...... ........... ++.+++.+|+..+|++||++.|+++++..+...
T Consensus 121 --------~~~~~~--~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 121 --------MPADDP--RDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred --------hccCCc--cccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 110000 00001122233 689999999999999999999999999877543
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.6e-23 Score=246.91 Aligned_cols=264 Identities=27% Similarity=0.332 Sum_probs=156.7
Q ss_pred CCCEEeccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccce
Q 042568 126 RLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRF 205 (983)
Q Consensus 126 ~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~ 205 (983)
.-..|+|++|.|+ .+|..+. ++|+.|++++|+++ .+|. ..++|++|+|++|+|+ .+|. ..++|+.
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~------lp~~Lk~LdLs~N~Lt-sLP~----lp~sL~~ 266 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA------LPPELRTLEVSGNQLT-SLPV----LPPGLLE 266 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC------CCCCCcEEEecCCccC-cccC----cccccce
Confidence 4556777777777 6666665 36777777777776 4553 2366777777777776 3442 2356777
Q ss_pred eecccCccccccchhhhccCCcceecccccccccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCcc
Q 042568 206 LLLWSNRLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQ 285 (983)
Q Consensus 206 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~ 285 (983)
|+|++|.++ .+|..+ ++|+.|+|++|+++ .+|. ..++|++|+|++|++..++. + ..+|+
T Consensus 267 L~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~----~p~~L~~LdLS~N~L~~Lp~------l------p~~L~ 325 (788)
T PRK15387 267 LSIFSNPLT-HLPALP---SGLCKLWIFGNQLT-SLPV----LPPGLQELSVSDNQLASLPA------L------PSELC 325 (788)
T ss_pred eeccCCchh-hhhhch---hhcCEEECcCCccc-cccc----cccccceeECCCCccccCCC------C------ccccc
Confidence 777777776 334322 45667777777776 4553 23567777777776654321 0 13456
Q ss_pred EEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCC
Q 042568 286 ELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNN 365 (983)
Q Consensus 286 ~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 365 (983)
.|++++|++++ +|. ++.+|+.|+|++|+|++ +|.. ..+|+.|++++|+|+ .+|.. ..+|+.|+|++|
T Consensus 326 ~L~Ls~N~L~~-LP~----lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N 392 (788)
T PRK15387 326 KLWAYNNQLTS-LPT----LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGN 392 (788)
T ss_pred ccccccCcccc-ccc----cccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCC
Confidence 66677776653 332 23456677777777663 4432 235666667777766 34432 245666777777
Q ss_pred cccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCc
Q 042568 366 SLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPS 445 (983)
Q Consensus 366 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 445 (983)
.|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++..+.
T Consensus 393 ~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 393 RLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred cccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 6663 3332 2456666777766663 4432 234556666666666 5566666666666666666666655554
Q ss_pred cc
Q 042568 446 DV 447 (983)
Q Consensus 446 ~~ 447 (983)
.+
T Consensus 464 ~L 465 (788)
T PRK15387 464 AL 465 (788)
T ss_pred HH
Confidence 44
No 418
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=3.4e-24 Score=265.49 Aligned_cols=209 Identities=18% Similarity=0.200 Sum_probs=138.8
Q ss_pred hcCC-CCccceeeEE-------ecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC
Q 042568 720 RIRH-RNLIRIITIC-------SKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIK 791 (983)
Q Consensus 720 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ 791 (983)
.++| +||++++++| ...+..+.++||+ +++|.+++... ...+++.+++.++.||++||+|||+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~g--- 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAHSQG--- 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHhCC---
Confidence 3455 5888888877 2223456778887 56999999642 345899999999999999999999986
Q ss_pred eEeecCCCCCeEeCCCCCE-------------------EEccccccccccCCccc-c--cccCCCCccccccCccccccc
Q 042568 792 VVHCDLKPSNILLDEDLTA-------------------LVADFGIAKLVKGIDES-V--NCANDSMSFTSTDGLLCGSVG 849 (983)
Q Consensus 792 ivH~Dikp~NiLl~~~~~~-------------------kl~Dfgla~~~~~~~~~-~--~~~~~~~~~~~~~~~~~gt~~ 849 (983)
|+||||||+|||++..+.+ |++|||+++........ . ........+........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 9999999999999655444 55555555432110000 0 000000001111122468999
Q ss_pred cccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccc
Q 042568 850 YIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKV 929 (983)
Q Consensus 850 y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (983)
|||||++.+..++.++|||||||++|||++|..|+... ...+..+. ....+ ...
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~---~~~~~~~~----------------~~~~~----~~~--- 234 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK---SRTMSSLR----------------HRVLP----PQI--- 234 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH---HHHHHHHH----------------HhhcC----hhh---
Confidence 99999999999999999999999999999998886421 00000000 00000 000
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 042568 930 WSDVVLELIELGLLCTQYNPSTRPSMLDVAHEM 962 (983)
Q Consensus 930 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 962 (983)
.....+..+++.+|++.+|.+||++.|++++-
T Consensus 235 -~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~ 266 (793)
T PLN00181 235 -LLNWPKEASFCLWLLHPEPSCRPSMSELLQSE 266 (793)
T ss_pred -hhcCHHHHHHHHHhCCCChhhCcChHHHhhch
Confidence 01123456788899999999999999998753
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.9e-23 Score=246.13 Aligned_cols=268 Identities=26% Similarity=0.386 Sum_probs=208.3
Q ss_pred CCCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCcccce
Q 042568 101 SSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQY 180 (983)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~ 180 (983)
..-..|||++|.++ .+|+.+. .+|+.|++++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .++|+.
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l------p~sL~~ 266 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL------PPGLLE 266 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc------ccccce
Confidence 45667899999988 7888775 47899999999998 57753 578999999999998 56642 368889
Q ss_pred eecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceecccccccccccchhhhcCCCCccEEEcccc
Q 042568 181 IDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYN 260 (983)
Q Consensus 181 L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N 260 (983)
|++++|.++ .+|. .+.+|+.|++++|+++. +|.. .++|+.|+|++|+|+ .+|. . ..+|+.|++++|
T Consensus 267 L~Ls~N~L~-~Lp~----lp~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~-~Lp~-l---p~~L~~L~Ls~N 332 (788)
T PRK15387 267 LSIFSNPLT-HLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA-SLPA-L---PSELCKLWAYNN 332 (788)
T ss_pred eeccCCchh-hhhh----chhhcCEEECcCCcccc-cccc---ccccceeECCCCccc-cCCC-C---cccccccccccC
Confidence 999999887 4442 24678899999999884 4542 467999999999998 4654 2 246888899999
Q ss_pred ccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEEeccc
Q 042568 261 DFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSS 340 (983)
Q Consensus 261 ~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 340 (983)
++..++. + ..+|++|+|++|+|++ +|. .+.+|+.|++++|+|++ +|... .+|+.|+|++
T Consensus 333 ~L~~LP~----------l--p~~Lq~LdLS~N~Ls~-LP~----lp~~L~~L~Ls~N~L~~-LP~l~---~~L~~LdLs~ 391 (788)
T PRK15387 333 QLTSLPT----------L--PSGLQELSVSDNQLAS-LPT----LPSELYKLWAYNNRLTS-LPALP---SGLKELIVSG 391 (788)
T ss_pred ccccccc----------c--ccccceEecCCCccCC-CCC----CCcccceehhhcccccc-Ccccc---cccceEEecC
Confidence 8865331 1 1478999999999985 454 24578899999999984 66543 5799999999
Q ss_pred cccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhcccCccCCCCCc
Q 042568 341 NLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHLSGTIP 420 (983)
Q Consensus 341 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 420 (983)
|+|++ +|.. .++|+.|++++|.|++ +|.. ..+|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++..+
T Consensus 392 N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 392 NRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred CcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHH
Confidence 99984 5543 4689999999999985 5653 346889999999998 689999999999999999999998887
Q ss_pred ccccCC
Q 042568 421 SSLGKC 426 (983)
Q Consensus 421 ~~l~~l 426 (983)
..+..+
T Consensus 463 ~~L~~l 468 (788)
T PRK15387 463 QALREI 468 (788)
T ss_pred HHHHHH
Confidence 766443
No 420
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.9e-23 Score=200.58 Aligned_cols=273 Identities=21% Similarity=0.305 Sum_probs=205.5
Q ss_pred HhCCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCC-CCccceeeEEecCCceeEE
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRH-RNLIRIITICSKPDFKALV 742 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv 742 (983)
..+.|...++||+|+||.+|.|. ..+|+.||||+-..... -.++..|.++++.+++ ..|..+..|..+.+...+|
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK---HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC---CcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 34678899999999999999999 66899999998654332 3678889999999976 6777888888888999999
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC---CCCEEEccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE---DLTALVADFGIAK 819 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~---~~~~kl~Dfgla~ 819 (983)
|+.+ |.||++...-. .+.++..+++-++-|++.-++|+|.++ ++||||||+|+|..- -..+.++|||+|+
T Consensus 90 MdLL-GPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eecc-CccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchh
Confidence 9999 67999887644 456899999999999999999999996 999999999999963 3468899999999
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
.+-+..+...++- .......||..|.+--...+...+.+.|.-|+|.++.+.--|..||........
T Consensus 163 ky~d~~t~~HIpy------re~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk------- 229 (341)
T KOG1163|consen 163 KYRDIRTRQHIPY------REDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK------- 229 (341)
T ss_pred hhccccccccCcc------ccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-------
Confidence 9877655443331 223346799999999888888889999999999999999999999976532211
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhcCC
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYLSS 971 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 971 (983)
.+-.++........ ..+......+.|+.-.+.-|-..--++-|+..-+-+.++.+.....+
T Consensus 230 -------~QKyEkI~EkK~s~----~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~ 290 (341)
T KOG1163|consen 230 -------KQKYEKISEKKMST----PIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNH 290 (341)
T ss_pred -------HHHHHHHHHhhcCC----CHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccc
Confidence 01111111111110 00111122345666667778887888889888887777766544433
No 421
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.6e-22 Score=202.98 Aligned_cols=269 Identities=17% Similarity=0.270 Sum_probs=201.7
Q ss_pred CCCCCCCccccCCcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEEe
Q 042568 667 GGFCPSSLIGSGRFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 667 ~~f~~~~~iG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 744 (983)
-.|.+.++||+|.||+.+.|+ +-+++.||||.-..... ..++..|.+.++.+. .++|..+|-|.....+..+|+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~---APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE---APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC---cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 468899999999999999999 56899999998654432 478889999999984 6899999988888888899999
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC-----CCEEEccccccc
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED-----LTALVADFGIAK 819 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~-----~~~kl~Dfgla~ 819 (983)
.+ |.||+|+..-. .++++..++..||.|+..-++|+|++. .|.|||||+|+||... ..+.|+|||+|+
T Consensus 105 LL-GPSLEDLFD~C---gR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLC---GRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hh-CcCHHHHHHHh---cCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 99 67998887644 567999999999999999999999995 9999999999999643 358899999999
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHH
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVK 899 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~ 899 (983)
.+.+..+...++ ........||.+||+--...|.+.+++.|.-|+|-++++.+-|..||...-.+..
T Consensus 178 ~YrDp~TkqHIP------YrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn------- 244 (449)
T KOG1165|consen 178 EYRDPKTKQHIP------YREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN------- 244 (449)
T ss_pred hhcCccccccCc------cccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch-------
Confidence 998776654433 1334456799999999999999999999999999999999999999976533211
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhc
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYL 969 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 969 (983)
.....++.+.+............+.++..-+.-.=..+-.+-|+.+-+...+.++.+..
T Consensus 245 -----------K~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 245 -----------KEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred -----------HHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 11111111111111111111222334444444444556677788877776666655443
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=1.4e-22 Score=240.85 Aligned_cols=318 Identities=23% Similarity=0.337 Sum_probs=157.0
Q ss_pred CCCCccccHHhHHHHHHHHHhccCCCccccCC----CCCCCCCCcceee----------------EEECCCCCeEEEEEc
Q 042568 25 DNADDDQIIRDRASLVTFMSSIISAPEHALES----WNSTDVHVCNWSG----------------VKCNNSRNKVVELDL 84 (983)
Q Consensus 25 ~~~~~~~~~~~~~~ll~~k~~~~~~~~~~l~s----w~~~~~~~c~w~g----------------v~c~~~~~~v~~l~l 84 (983)
|+.+.+..++|.+.++...+.+. -| +.+.+ |.+ +.++|.=.. |.|.. +.|+.+..
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~l~-~p-~~~~~~~~~~~~-~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~ 128 (754)
T PRK15370 54 CHPPETASPEEIKSKFECLRMLA-FP-AYADNIQYSRGG-ADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRV 128 (754)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhc-CC-chhhccccccCC-CCcccccCCcchhhheeeecCCceEEecCC--Cccccccc
Confidence 44566778899999999999995 33 34555 987 467886443 56643 34666654
Q ss_pred ccCCcccccc--c--------------------------cc-----ccCCCCcEEeCcCCcCCCCCccccCCCCCCCEEe
Q 042568 85 SARSIYGTIS--P--------------------------AL-----ANLSSLIVLDLSKNFFQGHIPAELGSLIRLKQLS 131 (983)
Q Consensus 85 ~~~~l~g~~~--~--------------------------~l-----~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (983)
-+........ . ++ +-..+...|+|+++.++ .+|..+. ++|+.|+
T Consensus 129 ~g~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~ 205 (754)
T PRK15370 129 TESEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLI 205 (754)
T ss_pred ccccccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEE
Confidence 4321111000 0 00 11123445555555555 3444432 3455555
Q ss_pred ccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccC
Q 042568 132 LSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSN 211 (983)
Q Consensus 132 Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N 211 (983)
|++|+|+ .+|..+. ++|++|+|++|+++ .+|..+. ++|+.|+|++|+++ .+
T Consensus 206 Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~-----~~L~~L~Ls~N~L~-~L------------------- 256 (754)
T PRK15370 206 LDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP-----DTIQEMELSINRIT-EL------------------- 256 (754)
T ss_pred ecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh-----ccccEEECcCCccC-cC-------------------
Confidence 5555555 4444333 35555555555554 3443322 24445555555444 33
Q ss_pred ccccccchhhhccCCcceecccccccccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccC
Q 042568 212 RLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAG 291 (983)
Q Consensus 212 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~ 291 (983)
|..+. ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+++.++. .+. ++|+.|++++
T Consensus 257 ------P~~l~--s~L~~L~Ls~N~L~-~LP~~l~---~sL~~L~Ls~N~Lt~LP~---------~lp--~sL~~L~Ls~ 313 (754)
T PRK15370 257 ------PERLP--SALQSLDLFHNKIS-CLPENLP---EELRYLSVYDNSIRTLPA---------HLP--SGITHLNVQS 313 (754)
T ss_pred ------ChhHh--CCCCEEECcCCccC-ccccccC---CCCcEEECCCCccccCcc---------cch--hhHHHHHhcC
Confidence 33332 24455555555554 3443321 245555555554433211 111 2455555555
Q ss_pred CcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCC
Q 042568 292 NNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEI 371 (983)
Q Consensus 292 n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 371 (983)
|+++. +|..+ +++|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+ .++|+.|+|++|.|+. +
T Consensus 314 N~Lt~-LP~~l---~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt~-L 382 (754)
T PRK15370 314 NSLTA-LPETL---PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALTN-L 382 (754)
T ss_pred Ccccc-CCccc---cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCCC-C
Confidence 55553 33222 2345556666665553 444332 45666666666665 344433 2456666666666653 3
Q ss_pred CCCCCCCCCCcEEEccCccccCcCcccc----cCcccchhhcccCccCC
Q 042568 372 PSAFGDIPHLGLLDLSKNKLSGSIPDSF----ANLSQLRRLLLYGNHLS 416 (983)
Q Consensus 372 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~----~~l~~L~~L~l~~N~l~ 416 (983)
|..+. ..|+.|++++|+++ .+|..+ ..++++..|++.+|.++
T Consensus 383 P~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 383 PENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 33332 24666666666665 333332 23355566666666665
No 423
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.88 E-value=2.8e-24 Score=221.92 Aligned_cols=420 Identities=22% Similarity=0.200 Sum_probs=260.2
Q ss_pred eEEECCC---------CCeEEEEEcccCCcccccccccccCCCCcEEeCcCCcCCCCCccccCCCCCCCEEeccC-ccCC
Q 042568 69 GVKCNNS---------RNKVVELDLSARSIYGTISPALANLSSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSW-NSLQ 138 (983)
Q Consensus 69 gv~c~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~-n~l~ 138 (983)
-|.|+.. ....|+++|..|+|+...+.+|+.+++|+.||||+|+|+.+-|+.|..+.+|.+|-+.+ |+|+
T Consensus 50 ~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~ 129 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT 129 (498)
T ss_pred eEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh
Confidence 3788764 23589999999999977778999999999999999999988899999999998888766 9999
Q ss_pred CCchhhhcccccccEEeccCcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccc
Q 042568 139 GKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVP 218 (983)
Q Consensus 139 ~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p 218 (983)
..--..|++|..|+.|.+.-|++. -++...+ ..+++|..|.+-+|.+. .|+...|..+..++.+.+..|.+..
T Consensus 130 ~l~k~~F~gL~slqrLllNan~i~-Cir~~al--~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~ic--- 202 (498)
T KOG4237|consen 130 DLPKGAFGGLSSLQRLLLNANHIN-CIRQDAL--RDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFIC--- 202 (498)
T ss_pred hhhhhHhhhHHHHHHHhcChhhhc-chhHHHH--HHhhhcchhcccchhhh-hhccccccchhccchHhhhcCcccc---
Confidence 666678999999999999999997 4444333 35666666666666665 4555555566666666666665220
Q ss_pred hhhhccCCcceecccccccccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccC
Q 042568 219 QALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMI 298 (983)
Q Consensus 219 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 298 (983)
..+++.|.. ++..|.+ .++...-..-..|.++++..++.... ...+.++..--.+.+...+..
T Consensus 203 --dCnL~wla~-~~a~~~i-------etsgarc~~p~rl~~~Ri~q~~a~kf-------~c~~esl~s~~~~~d~~d~~c 265 (498)
T KOG4237|consen 203 --DCNLPWLAD-DLAMNPI-------ETSGARCVSPYRLYYKRINQEDARKF-------LCSLESLPSRLSSEDFPDSIC 265 (498)
T ss_pred --ccccchhhh-HHhhchh-------hcccceecchHHHHHHHhcccchhhh-------hhhHHhHHHhhccccCcCCcC
Confidence 111111111 0111111 01222223333333333332221110 011112222222333333344
Q ss_pred CccccccccCeeEEEccCccccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCC
Q 042568 299 PSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDI 378 (983)
Q Consensus 299 p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 378 (983)
|..-+.-.++|++|+|++|+|++.-+.+|..+..+++|.|..|+|...-...|.+++.|+.|+|.+|+|+..-|.+|..+
T Consensus 266 P~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~ 345 (498)
T KOG4237|consen 266 PAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTL 345 (498)
T ss_pred hHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccccc
Confidence 44333323578888888888887778888888888888888888876656667888888888888888888888888888
Q ss_pred CCCcEEEccCccccC-----cCccc-----------ccCcccchhhcccCccCCC---CCcccccCCCCCCEEEccCccc
Q 042568 379 PHLGLLDLSKNKLSG-----SIPDS-----------FANLSQLRRLLLYGNHLSG---TIPSSLGKCVNLEILDLSHNKI 439 (983)
Q Consensus 379 ~~L~~L~Ls~N~l~~-----~~~~~-----------~~~l~~L~~L~l~~N~l~~---~~p~~l~~l~~L~~L~Ls~N~l 439 (983)
..|.+|+|-.|.+.= .+.++ -+.-..++.+.++.+.+.. ..|++.+..+
T Consensus 346 ~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~------------ 413 (498)
T KOG4237|consen 346 FSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLT------------ 413 (498)
T ss_pred ceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCC------------
Confidence 888888888887641 00011 1122345556665555431 1222221110
Q ss_pred cCcCCccccCCCccceeccccCCCCCCCCccccccccccccccccccccccCCCcccccccccceEEeCCCccccccccc
Q 042568 440 SGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVS 519 (983)
Q Consensus 440 ~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 519 (983)
++.-|.. .+-+..-..-|++.++ .+|..+. ....+|++.+|.++ .+|.+ .+++| .+++|+|+++..-...
T Consensus 414 s~~cP~~---c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~t 483 (498)
T KOG4237|consen 414 SSPCPPP---CTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYT 483 (498)
T ss_pred CCCCCCC---cchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhccc
Confidence 1111221 2222211344444444 3443332 13456778888887 77776 56677 8888888888766777
Q ss_pred ccCCCCccEEecCCc
Q 042568 520 VGQLPYLKQFDVSSN 534 (983)
Q Consensus 520 ~~~l~~L~~L~ls~N 534 (983)
|.++.+|.+|-||+|
T Consensus 484 f~n~tql~tlilsyn 498 (498)
T KOG4237|consen 484 FSNMTQLSTLILSYN 498 (498)
T ss_pred ccchhhhheeEEecC
Confidence 888888888888876
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=2.3e-22 Score=220.13 Aligned_cols=176 Identities=20% Similarity=0.168 Sum_probs=132.4
Q ss_pred HHHHhCCCCCCCccccCCcEeEEEEEEC--CCcEEEEEEeeccc----CcchhHHHHHHHHHHHhcCCCCccceeeEEec
Q 042568 662 LIEATGGFCPSSLIGSGRFGHVYKGVLQ--DNTRIAVKVLDLTT----TGEITGSFKRECQILKRIRHRNLIRIITICSK 735 (983)
Q Consensus 662 l~~~~~~f~~~~~iG~G~~g~Vy~~~~~--~~~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 735 (983)
.....++|...+.||+|+||+||+|.+. +++.||||++.... .......|.+|++++++++|+|+++.+..+
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3445678999999999999999999864 57778999875321 122356799999999999999998533322
Q ss_pred CCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecC-CCCCeEeCCCCCEEEcc
Q 042568 736 PDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDL-KPSNILLDEDLTALVAD 814 (983)
Q Consensus 736 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Di-kp~NiLl~~~~~~kl~D 814 (983)
+..++||||++|++|... .. . . ...++.|+++||+|||+.+ |+|||| ||+|||++.++.+||+|
T Consensus 91 -~~~~LVmE~~~G~~L~~~-~~----~---~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiD 155 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLA-RP----H---G---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVID 155 (365)
T ss_pred -CCcEEEEEccCCCCHHHh-Cc----c---c---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEE
Confidence 457999999999999632 11 0 1 1467889999999999996 999999 99999999999999999
Q ss_pred ccccccccCCcccccccCCCCccccccCccccccccccccccCCC
Q 042568 815 FGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK 859 (983)
Q Consensus 815 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 859 (983)
||+|+.+.......... .........+++.|+|||++...
T Consensus 156 FGlA~~~~~~~~~~~~~-----~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 156 FQLASVFRRRGALYRIA-----AYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CccceecccCcchhhhh-----hhhhhhhhhccCccCCcccCChh
Confidence 99999876432211100 00111246789999999998754
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.6e-21 Score=213.59 Aligned_cols=269 Identities=20% Similarity=0.266 Sum_probs=197.5
Q ss_pred CCCCCCccccCCcEeEEEEEECCC--cEEEEEEeecccCcchhHHHHHHHHHHHhcCC----CCccceeeEE-ecCCcee
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDN--TRIAVKVLDLTTTGEITGSFKRECQILKRIRH----RNLIRIITIC-SKPDFKA 740 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~--~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~ 740 (983)
+|.+.+.||+|+||.||+|..... ..+|+|........... .+..|+.++..+.. +++..+++.. ......+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 788999999999999999997653 47899987655433222 78899999999973 6899999999 5778899
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC-----CCEEEccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED-----LTALVADF 815 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~-----~~~kl~Df 815 (983)
+||+.+ |.+|.+...... ...++..++.+|+.|++.+|.++|+.| ++||||||+|+++... ..+.+.||
T Consensus 98 iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEec
Confidence 999988 679998775443 467999999999999999999999997 9999999999999855 46899999
Q ss_pred ccccccc--CCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCc
Q 042568 816 GIAKLVK--GIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSS 893 (983)
Q Consensus 816 gla~~~~--~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~ 893 (983)
|+|+... ......... .........||..|.++....+...+++.|+||++.++.|+..|..||........
T Consensus 172 Glar~~~~~~~~~~~~~~-----~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~- 245 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRP-----PRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL- 245 (322)
T ss_pred CCCccccccCCCCccccc-----CCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-
Confidence 9998332 221110000 00111335699999999999999999999999999999999999999854321111
Q ss_pred hHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHhhc
Q 042568 894 LHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQYL 969 (983)
Q Consensus 894 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 969 (983)
...... ......... .....+.++.++...+-..+..++|....+...++......
T Consensus 246 ~~~~~~------------~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 246 KSKFEK------------DPRKLLTDR--------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHHHH------------Hhhhhcccc--------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 001000 000000000 00113345666666677789999999999999988776553
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=3e-21 Score=229.54 Aligned_cols=247 Identities=24% Similarity=0.375 Sum_probs=167.8
Q ss_pred ccccEEeccCcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcc
Q 042568 149 HQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLE 228 (983)
Q Consensus 149 ~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 228 (983)
.+...|+++++.++ .+|..+. ++|+.|+|++|.++ .+|... .++|++|++++|+++ .+|..+. .+|+
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip-----~~L~~L~Ls~N~Lt-sLP~~l---~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~ 244 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP-----EQITTLILDNNELK-SLPENL---QGNIKTLYANSNQLT-SIPATLP--DTIQ 244 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc-----cCCcEEEecCCCCC-cCChhh---ccCCCEEECCCCccc-cCChhhh--cccc
Confidence 34667777777776 5665442 46777777777777 455443 257888999999888 4566554 4799
Q ss_pred eecccccccccccchhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccC
Q 042568 229 WLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTN 308 (983)
Q Consensus 229 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~ 308 (983)
.|+|++|+++ .+|..+. ++|+.|+|++|++..++ ..+. .+|+.|++++|++++ +|..+ +.+
T Consensus 245 ~L~Ls~N~L~-~LP~~l~---s~L~~L~Ls~N~L~~LP---------~~l~--~sL~~L~Ls~N~Lt~-LP~~l---p~s 305 (754)
T PRK15370 245 EMELSINRIT-ELPERLP---SALQSLDLFHNKISCLP---------ENLP--EELRYLSVYDNSIRT-LPAHL---PSG 305 (754)
T ss_pred EEECcCCccC-cCChhHh---CCCCEEECcCCccCccc---------cccC--CCCcEEECCCCcccc-Ccccc---hhh
Confidence 9999999998 8887654 47899999999886533 2222 478888888888874 45433 346
Q ss_pred eeEEEccCccccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccC
Q 042568 309 LVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSK 388 (983)
Q Consensus 309 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 388 (983)
|+.|++++|.++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++
T Consensus 306 L~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~ 376 (754)
T PRK15370 306 ITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSR 376 (754)
T ss_pred HHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCC
Confidence 7888888888873 554442 578888888888874 565543 57888888888777 4555442 5677788888
Q ss_pred ccccCcCcccccCcccchhhcccCccCCCCCccccc----CCCCCCEEEccCcccc
Q 042568 389 NKLSGSIPDSFANLSQLRRLLLYGNHLSGTIPSSLG----KCVNLEILDLSHNKIS 440 (983)
Q Consensus 389 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~----~l~~L~~L~Ls~N~l~ 440 (983)
|+|+ .+|..+. ..|+.|++++|+|+ .+|..+. .++++..|++.+|.++
T Consensus 377 N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 377 NALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 8777 3454443 35777777777776 4454332 3355666666666655
No 427
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.85 E-value=4.5e-22 Score=195.24 Aligned_cols=248 Identities=24% Similarity=0.379 Sum_probs=184.8
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccC-cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcc
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTT-GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGS 750 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 750 (983)
..+|.+...|+.|+|+++ |..+++|+++.... ....+.|..|.-.++-+.||||..+++.|..+....++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 346888999999999998 67777887754432 2345789999999999999999999999999999999999999999
Q ss_pred cccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEe-ecCCCCCeEeCCCCCEEEccccccccccCCccccc
Q 042568 751 LENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVH-CDLKPSNILLDEDLTALVADFGIAKLVKGIDESVN 829 (983)
Q Consensus 751 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH-~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~ 829 (983)
|...++... .--.+..++.+++.++|+|++|||+.- +++- --+.+..|++|++.+++|+ .+-+++.-+
T Consensus 274 lynvlhe~t--~vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltaris-mad~kfsfq------ 342 (448)
T KOG0195|consen 274 LYNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQ------ 342 (448)
T ss_pred HHHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhhee-cccceeeee------
Confidence 999998754 445778899999999999999999976 3443 4588999999999988874 222222111
Q ss_pred ccCCCCccccccCccccccccccccccCCCCC---CccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCC
Q 042568 830 CANDSMSFTSTDGLLCGSVGYIAPEYGMGKRA---STHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRL 906 (983)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 906 (983)
... ..-.+.||+||.++..+. -+.+|+|||++++||+.|...||....+-.-.+.-
T Consensus 343 ---------e~g--r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki---------- 401 (448)
T KOG0195|consen 343 ---------EVG--RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI---------- 401 (448)
T ss_pred ---------ccc--cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh----------
Confidence 110 123578999999887653 35689999999999999999999754321111000
Q ss_pred cHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 042568 907 DPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLK 966 (983)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 966 (983)
.+.+... ..| +.....+.+++.-|+..||.+||.+..++-.|+++.
T Consensus 402 ------aleglrv-~ip-------pgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 402 ------ALEGLRV-HIP-------PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ------hhccccc-cCC-------CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 0111111 011 224455666666799999999999999999998874
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1e-21 Score=229.60 Aligned_cols=257 Identities=22% Similarity=0.266 Sum_probs=189.9
Q ss_pred CCCccccCCcEeEEEEEEC-CCcEEEEEEee-----cccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 671 PSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLD-----LTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~-----~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
...++|.|++|.|+.+... .....+.|.+. ..........+..|+.+-..++|+|++..+..+.+.+...-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4678999999988877743 34444444432 11111222336678888888999999888877766666666699
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+++ +|...+... ..+...++..++.|+..|+.|+|..| |.|||+|++|++++.++.+||+|||.+....-.
T Consensus 402 ~~~~-Dlf~~~~~~----~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN----GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHHhcc----cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 998888743 25778889999999999999999997 999999999999999999999999999866432
Q ss_pred cccccccCCCCccccccCccccccccccccccCCCCCCcc-chhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCC
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTH-GDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYP 903 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~ 903 (983)
.+.. .......+|+..|+|||...+..|.++ .||||.|++++.|++|+.||......+....+
T Consensus 474 ~e~~---------~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~------- 537 (601)
T KOG0590|consen 474 WEKN---------IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT------- 537 (601)
T ss_pred cchh---------hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh-------
Confidence 2110 022334689999999999999998765 69999999999999999999754333222100
Q ss_pred CCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 904 HRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
..............+.+.+.+.+-..++.+|++.+|.+|.|+++|++.
T Consensus 538 ----------~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 538 ----------NNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ----------hccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 001111111222344567788889999999999999999999999864
No 429
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=2.7e-21 Score=222.87 Aligned_cols=256 Identities=21% Similarity=0.192 Sum_probs=187.0
Q ss_pred CCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHH--HhcCCCCccceeeEEecCCceeEEEec
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQIL--KRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l--~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.|...+.+|++.|=+|.+|++++|. |+||++-+....-..+.|.++++-. .-++|||++++.-+-......|+|-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4566788999999999999998777 9999996655444455555544443 445899999998887777788999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGID 825 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~ 825 (983)
..+ +|.|++.. ++-+...+.+-|+.|++.|+.-+|..+ |+|||||.+|||++.-..+.|+||..-+...-.+
T Consensus 103 vkh-nLyDRlST----RPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 103 VKH-NLYDRLST----RPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred Hhh-hhhhhhcc----chHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 975 88888874 455777888899999999999999996 9999999999999999999999998876433222
Q ss_pred ccccccCCCCccccccCccccccccccccccCCC----------C-CCccchhHHHHHHHHHHHh-CCCCCCcccCCCCc
Q 042568 826 ESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGK----------R-ASTHGDVYSFGVLLLEIVT-GRRPTDVLFHDGSS 893 (983)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~k~Dv~SlG~il~ellt-g~~p~~~~~~~~~~ 893 (983)
++ +.+|.....+...-.+|.|||.+... . .+++.||||+||++.|+++ |++||+-. .
T Consensus 175 DN------Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----Q 243 (1431)
T KOG1240|consen 175 DN------PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----Q 243 (1431)
T ss_pred CC------cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----H
Confidence 21 12233333344455689999976431 2 5788999999999999999 67777521 1
Q ss_pred hHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 042568 894 LHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMG 963 (983)
Q Consensus 894 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 963 (983)
+..+.... ....+..+.++.+ ..+..++..|++.||++|.++++.++.-+
T Consensus 244 L~aYr~~~-----~~~~e~~Le~Ied---------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 244 LLAYRSGN-----ADDPEQLLEKIED---------------VSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HHhHhccC-----ccCHHHHHHhCcC---------------ccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 11111110 1111222222222 25788899999999999999999998744
No 430
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=2.4e-19 Score=200.47 Aligned_cols=265 Identities=26% Similarity=0.342 Sum_probs=197.2
Q ss_pred CCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcc--hhHHHHHHHHHHHhcCCC-CccceeeEEecCCceeEEEec
Q 042568 669 FCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGE--ITGSFKRECQILKRIRHR-NLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 669 f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 745 (983)
|...+.||.|+||.||++... ..+|+|.+....... ....+.+|+.+++.+.|+ +++++++++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999977 789999987665544 477899999999999988 799999999777778999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC-CEEEccccccccccCC
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL-TALVADFGIAKLVKGI 824 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~-~~kl~Dfgla~~~~~~ 824 (983)
+.++++.+++...... ..+.......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++.....
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999665532211 36888999999999999999999996 99999999999999988 7999999999855433
Q ss_pred cccccccCCCCccccccCccccccccccccccCC---CCCCccchhHHHHHHHHHHHhCCCCCCcccCC--CCchHHHHH
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG---KRASTHGDVYSFGVLLLEIVTGRRPTDVLFHD--GSSLHEWVK 899 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~--~~~l~~~~~ 899 (983)
....... .......||..|+|||...+ ..+....|+||+|++++++++|..||...... .......+.
T Consensus 156 ~~~~~~~-------~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 156 GSTSSIP-------ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred Ccccccc-------ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH
Confidence 2110000 12344689999999999988 57889999999999999999999996532211 011111111
Q ss_pred hhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 900 RHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.... +.................+.+++..|+..+|..|.++.+....
T Consensus 229 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 229 ELPT---------------PSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred hcCC---------------cccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1000 0000000000001223568888999999999999999988765
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=1e-19 Score=183.53 Aligned_cols=141 Identities=17% Similarity=0.158 Sum_probs=109.4
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccCcc-h-------hH-----------------HHHHHHHHHHhcCCCCc
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGE-I-------TG-----------------SFKRECQILKRIRHRNL 726 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~-~-------~~-----------------~~~~E~~~l~~l~h~ni 726 (983)
...||+|+||.||+|...+|+.||||+++...... . .. ...+|++++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46799999999999998889999999986542110 0 11 22349999999988887
Q ss_pred cceeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHH-hccCCCCeEeecCCCCCeEeC
Q 042568 727 IRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYL-HHHSPIKVVHCDLKPSNILLD 805 (983)
Q Consensus 727 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~L-H~~~~~~ivH~Dikp~NiLl~ 805 (983)
.....+.. ...++||||++++++...... ...+++..+..++.|++.+|.|+ |+.+ |+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE
Confidence 54444332 234899999998776544322 23588899999999999999999 6775 99999999999998
Q ss_pred CCCCEEEcccccccccc
Q 042568 806 EDLTALVADFGIAKLVK 822 (983)
Q Consensus 806 ~~~~~kl~Dfgla~~~~ 822 (983)
++.++|+|||+|....
T Consensus 153 -~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 -DGKLYIIDVSQSVEHD 168 (190)
T ss_pred -CCcEEEEEccccccCC
Confidence 4789999999997543
No 432
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=1.3e-19 Score=179.26 Aligned_cols=198 Identities=15% Similarity=0.047 Sum_probs=140.2
Q ss_pred CCCCccccCCcEeEEEEEECCCcEEEEEEeecccCc---chhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEEec
Q 042568 670 CPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTG---EITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
.+...|++|+||+||.+.. .+.+++.+.++....- -....+.+|++++++++ |+++.+++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567899999999997766 5788888877554431 12236889999999995 5889999886 346999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecC-CCCCeEeCCCCCEEEccccccccccCC
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDL-KPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Di-kp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
++|.+|.+.... ....++.|+++++.++|+.| |+|||| ||+|||++.++.++|+|||+|......
T Consensus 80 I~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 80 LAGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred ecCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 999888654321 11357889999999999997 999999 799999999999999999999865432
Q ss_pred cccccccCCCCccccccCccccccccccccccCC--CCCCccchhHHHHHHHHHHHhCCCCCCc
Q 042568 825 DESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG--KRASTHGDVYSFGVLLLEIVTGRRPTDV 886 (983)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~SlG~il~elltg~~p~~~ 886 (983)
..........+...........++.|++|+...- ..--.+.+.++-|.-+|.++|++.|...
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 2100000000000000111235777888874332 2223567999999999999999998643
No 433
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.7e-19 Score=183.04 Aligned_cols=173 Identities=11% Similarity=0.114 Sum_probs=133.3
Q ss_pred HhCCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcc--hhHH------HHHHHHHHHhcCCCCccceeeEEecC
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGE--ITGS------FKRECQILKRIRHRNLIRIITICSKP 736 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~--~~~~------~~~E~~~l~~l~h~niv~l~~~~~~~ 736 (983)
..++|...+++|.|+||.||.+.. ++..+|||.+....... .... +.+|++.+.+++||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 468899999999999999999766 57789999996443221 2222 68999999999999999999886533
Q ss_pred --------CceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC
Q 042568 737 --------DFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL 808 (983)
Q Consensus 737 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~ 808 (983)
...++||||++|.+|.++.. ++. ....++++++..+|..+ ++|||+||+||+++.++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC
Confidence 35789999999999977632 222 24569999999999996 99999999999999988
Q ss_pred CEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh
Q 042568 809 TALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT 879 (983)
Q Consensus 809 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt 879 (983)
++++|||.......... ...+.....+..++|+||||+++.....
T Consensus 173 -i~liDfg~~~~~~e~~a-------------------------~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRKA-------------------------KDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred -EEEEECCCcccccchhh-------------------------HHHHHHHhHhcccccccceeEeehHHHH
Confidence 99999998865431110 0113444456678999999999876653
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=4.7e-21 Score=175.77 Aligned_cols=163 Identities=31% Similarity=0.569 Sum_probs=98.2
Q ss_pred cCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhcccCccCCCCCcccccCCCCCCEE
Q 042568 353 LMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEIL 432 (983)
Q Consensus 353 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 432 (983)
.+++++.|.||+|+++ .+|..++.+.+|+.|++++|+|+ .+|.+++.+++|+.|+++-|++. ..|..|+.++.|++|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3445555555555555 44555666666666666666666 56666777777777777777776 677777777777777
Q ss_pred EccCccccC-cCCccccCCCccceeccccCCCCCCCCccccccccccccccccccccccCCCcccccccccceEEeCCCc
Q 042568 433 DLSHNKISG-IIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNS 511 (983)
Q Consensus 433 ~Ls~N~l~~-~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 511 (983)
||++|++.. .+|..|..+..|+. |+|+.|.+. .+|+.++.+++|+.|.+..|.
T Consensus 108 dltynnl~e~~lpgnff~m~tlra-lyl~dndfe-------------------------~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRA-LYLGDNDFE-------------------------ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred hccccccccccCCcchhHHHHHHH-HHhcCCCcc-------------------------cCChhhhhhcceeEEeeccCc
Confidence 777777752 34555555555553 555555544 455555555555555555555
Q ss_pred ccccccccccCCCCccEEecCCccccCCcCccccC
Q 042568 512 LEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSFQA 546 (983)
Q Consensus 512 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 546 (983)
+- .+|.+++.+..|+.|++.+|+++ .+|.++++
T Consensus 162 ll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 162 LL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred hh-hCcHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 54 45555555555555555555555 45554443
No 435
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=1.5e-18 Score=176.05 Aligned_cols=141 Identities=22% Similarity=0.240 Sum_probs=111.7
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccCcc-------------------------hhHHHHHHHHHHHhcCCCCc
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGE-------------------------ITGSFKRECQILKRIRHRNL 726 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~-------------------------~~~~~~~E~~~l~~l~h~ni 726 (983)
...||+|++|.||+|...+|+.||||++....... ....+..|.+.+.+++|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999998789999999986542110 01234678999999999988
Q ss_pred cceeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCCeEeecCCCCCeEeC
Q 042568 727 IRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHH-HSPIKVVHCDLKPSNILLD 805 (983)
Q Consensus 727 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dikp~NiLl~ 805 (983)
.....+... ..++||||++++++...... ...++...+..++.|++.++.++|+ .| |+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~----~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK----DVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh----hccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE
Confidence 655554433 24899999998865443221 2346788899999999999999999 75 99999999999999
Q ss_pred CCCCEEEcccccccccc
Q 042568 806 EDLTALVADFGIAKLVK 822 (983)
Q Consensus 806 ~~~~~kl~Dfgla~~~~ 822 (983)
++.++|+|||+|+...
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 8999999999998765
No 436
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=6.3e-19 Score=184.35 Aligned_cols=232 Identities=22% Similarity=0.264 Sum_probs=147.2
Q ss_pred CCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcC----------CCCccceeeEEecC-
Q 042568 671 PSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIR----------HRNLIRIITICSKP- 736 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~----------h~niv~l~~~~~~~- 736 (983)
..+.||.|+++.||.+.+. +++.+|||++..... ....+++++|.-....+. |-.++..++....+
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 4578999999999999976 589999999855542 224567777776555532 22333333333211
Q ss_pred -----------C-----ceeEEEecccCccccccccc---ccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecC
Q 042568 737 -----------D-----FKALVLPLMSNGSLENHLYP---SHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDL 797 (983)
Q Consensus 737 -----------~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Di 797 (983)
. ..+++|+-+. ++|.+.+.. .......+....+..+..|+.+.+++||..| ++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST-
T ss_pred CCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEeccc
Confidence 1 2256777774 577666432 2111223445566788899999999999997 999999
Q ss_pred CCCCeEeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCC--------CCCCccchhHH
Q 042568 798 KPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMG--------KRASTHGDVYS 869 (983)
Q Consensus 798 kp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~k~Dv~S 869 (983)
||+|++++++|.++|+||+.....+..... ...+..|.+||.... ..++.+.|.|+
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----------------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~ 235 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRC----------------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQ 235 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEG----------------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeec----------------cCCCcccCChhhhhhhcccCcccceeeeccCHHH
Confidence 999999999999999999988765421110 134577899997543 25788999999
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCC
Q 042568 870 FGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNP 949 (983)
Q Consensus 870 lG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 949 (983)
+|+++|.|++|+.||+.......... .+..+. +.+..+.+|+..+++++|
T Consensus 236 LG~~ly~lWC~~lPf~~~~~~~~~~~-----------------------------~f~~C~-~~Pe~v~~LI~~lL~~~~ 285 (288)
T PF14531_consen 236 LGITLYSLWCGRLPFGLSSPEADPEW-----------------------------DFSRCR-DMPEPVQFLIRGLLQRNP 285 (288)
T ss_dssp HHHHHHHHHHSS-STCCCGGGSTSGG-----------------------------GGTTSS----HHHHHHHHHHT-SSG
T ss_pred HHHHHHHHHHccCCCCCCCccccccc-----------------------------cchhcC-CcCHHHHHHHHHHccCCc
Confidence 99999999999999975422111100 111222 577889999999999999
Q ss_pred CCC
Q 042568 950 STR 952 (983)
Q Consensus 950 ~~R 952 (983)
++|
T Consensus 286 ~~R 288 (288)
T PF14531_consen 286 EDR 288 (288)
T ss_dssp GGS
T ss_pred ccC
Confidence 988
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=4e-20 Score=169.72 Aligned_cols=180 Identities=28% Similarity=0.482 Sum_probs=134.6
Q ss_pred CcccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCCCCCCcccccccccccc
Q 042568 401 NLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLA 480 (983)
Q Consensus 401 ~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~ 480 (983)
++..++.|-|++|+++ .+|..+..+.+|+.|++++|+++ .+|..+++++.|+. |+++-|++. ..|..|+.++.|+.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~-lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRI-LNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhh-eecchhhhh-cCccccCCCchhhh
Confidence 3445555555555555 45555555555555555555555 45555555555554 666656555 56666777777777
Q ss_pred ccccccccc-cCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCccccCCcCccccCCCCcceEeccCCc
Q 042568 481 IDLSFNNLS-GSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSFQASPTLKQLNFSFNK 559 (983)
Q Consensus 481 L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~N~ 559 (983)
|||++|+++ ..+|..|..+..|+.|+|++|.++ .+|..++++++|+.|.+.+|.+. ++|.+++.++.|+.|.+.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 777777775 367889999999999999999999 89999999999999999999998 899999999999999999999
Q ss_pred cccccCCCCCCcc---cccccccCCcCccC
Q 042568 560 FSGNISNKGAFSS---LTIASFQGNDGLCG 586 (983)
Q Consensus 560 l~~~~~~~~~~~~---~~~~~~~~N~~lc~ 586 (983)
++-.+|+.+.+.- -.....+.|||.-.
T Consensus 185 l~vlppel~~l~l~~~k~v~r~E~NPwv~p 214 (264)
T KOG0617|consen 185 LTVLPPELANLDLVGNKQVMRMEENPWVNP 214 (264)
T ss_pred eeecChhhhhhhhhhhHHHHhhhhCCCCCh
Confidence 9999998765533 33445788988653
No 438
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=5.7e-20 Score=204.21 Aligned_cols=212 Identities=27% Similarity=0.248 Sum_probs=127.4
Q ss_pred EEEcccCCcc-cccccccccCCCCcEEeCcCCcCCCC----CccccCCCCCCCEEeccCccCC------CCchhhhcccc
Q 042568 81 ELDLSARSIY-GTISPALANLSSLIVLDLSKNFFQGH----IPAELGSLIRLKQLSLSWNSLQ------GKIPSQLGSLH 149 (983)
Q Consensus 81 ~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~n~l~------~~~p~~~~~L~ 149 (983)
.|+|..+.+. +.....+..+++|++|++++|.+++. +++.+...++|++|+++++.+. ..++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666665 33445566677788888888877542 5556667777888888887776 23445667777
Q ss_pred cccEEeccCcccccccCCcccccCCCcccceeecccccccCCCC---Ccccccc-cccceeecccCccccc----cchhh
Q 042568 150 QLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIP---LKNECEL-RNLRFLLLWSNRLVGQ----VPQAL 221 (983)
Q Consensus 150 ~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip---~~~~~~l-~~L~~L~L~~N~l~~~----~p~~l 221 (983)
+|++|++++|.+.+..+..+..+...++|++|++++|.+++... ...+..+ ++|++|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 88888888887765444333211111447777777777663111 0122334 6777777777777632 33455
Q ss_pred hccCCcceecccccccccccchh---hhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccc
Q 042568 222 ANSSKLEWLDLESNMFSGELPSE---IISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGG 296 (983)
Q Consensus 222 ~~l~~L~~L~Ls~N~l~~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 296 (983)
..+.+|++|++++|.+++..... .+..+++|++|+|++|.+... ....+...+..+++|++|++++|.+++
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~----~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDE----GASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChH----HHHHHHHHhcccCCCCEEecCCCcCch
Confidence 56667777777777776421111 123445777777777766431 122333445556677777777776664
No 439
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.74 E-value=6e-18 Score=188.11 Aligned_cols=219 Identities=26% Similarity=0.382 Sum_probs=163.4
Q ss_pred HHhcCCCCccceeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecC
Q 042568 718 LKRIRHRNLIRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDL 797 (983)
Q Consensus 718 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Di 797 (983)
|+.+.|.|+.+++|.+.++...+.|.+|++.|+|.+.+... ...++|.....+.+++++||+|+|... + ..|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~---~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i-~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE---DIKLDYFFILSFIRDISKGLAYLHNSP-I-GYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc---ccCccHHHHHHHHHHHHHHHHHHhcCc-c-eeeeee
Confidence 35688999999999999999999999999999999999863 457999999999999999999999874 2 289999
Q ss_pred CCCCeEeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCC-------CCccchhHHH
Q 042568 798 KPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKR-------ASTHGDVYSF 870 (983)
Q Consensus 798 kp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~k~Dv~Sl 870 (983)
++.|.++|..+.+|++|||+.......... .......-..-|.|||.+.+.. .+.+.|||||
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~-----------~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~ 144 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEP-----------EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSF 144 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccc-----------cccchhHHHHhccCHHHhcccccccccccccccCCeehH
Confidence 999999999999999999998876431000 0111123446799999987631 4677999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhh-cCCCCCccccccchHHHHHHHHHHHhhhcCCCC
Q 042568 871 GVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAK-YAPQHMPIYYNKVWSDVVLELIELGLLCTQYNP 949 (983)
Q Consensus 871 G~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 949 (983)
|++++|+++.+.||+........ .+++.+ +.. ......|.... ..+...++..++.+||..+|
T Consensus 145 ~ii~~ei~~r~~~~~~~~~~~~~-------------~eii~~-~~~~~~~~~rP~i~~--~~e~~~~l~~l~~~cw~e~P 208 (484)
T KOG1023|consen 145 GIIMYEILFRSGPFDLRNLVEDP-------------DEIILR-VKKGGSNPFRPSIEL--LNELPPELLLLVARCWEEIP 208 (484)
T ss_pred HHHHHHHHhccCccccccccCCh-------------HHHHHH-HHhcCCCCcCcchhh--hhhcchHHHHHHHHhcccCh
Confidence 99999999999999753222111 112222 111 11111111111 01344579999999999999
Q ss_pred CCCCCHHHHHHHHHHhHhh
Q 042568 950 STRPSMLDVAHEMGRLKQY 968 (983)
Q Consensus 950 ~~RPs~~evl~~L~~~~~~ 968 (983)
++||+++++-..++.+...
T Consensus 209 ~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 209 EKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred hhCccHHHHHhhhhhhccc
Confidence 9999999999888776554
No 440
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=4.8e-18 Score=201.54 Aligned_cols=197 Identities=21% Similarity=0.279 Sum_probs=158.6
Q ss_pred HhCCCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcC---CCCccceeeEEecCCceeE
Q 042568 665 ATGGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIR---HRNLIRIITICSKPDFKAL 741 (983)
Q Consensus 665 ~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~l 741 (983)
....|.+.+.||+|+||+||+|...+|+.||+|+-+.+..-+ |.-=.+++.+|+ -+.|..+..++...+.-++
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 345688889999999999999998889999999876554332 222233444444 3455566666677788899
Q ss_pred EEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeC-------CCCCEEEcc
Q 042568 742 VLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLD-------EDLTALVAD 814 (983)
Q Consensus 742 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~-------~~~~~kl~D 814 (983)
|+||.+.|+|.+++.. .+.++|..++.++.|+++.+++||..+ |||+||||+|+||. ....++|+|
T Consensus 772 v~ey~~~Gtlld~~N~----~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINT----NKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred eeeccccccHHHhhcc----CCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEe
Confidence 9999999999999983 566999999999999999999999996 99999999999994 234689999
Q ss_pred ccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCC
Q 042568 815 FGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRP 883 (983)
Q Consensus 815 fgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p 883 (983)
||.+-.+..-. ++ ......++|-++-.+|+..|+.++.++|-|.++-+++-|+.|++-
T Consensus 845 fG~siDm~lfp-------~~----~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 845 FGRSIDMKLFP-------DG----TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cccceeeeEcC-------CC----cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99997664322 11 223345789999999999999999999999999999999999863
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=3.3e-20 Score=206.07 Aligned_cols=208 Identities=25% Similarity=0.330 Sum_probs=97.3
Q ss_pred ccCCCCcEEEeeCCcccCCCCCCCCCCCC---CcEEEccCccccC----cCcccccCc-ccchhhcccCccCCCC----C
Q 042568 352 CLMSKLERVYLSNNSLSGEIPSAFGDIPH---LGLLDLSKNKLSG----SIPDSFANL-SQLRRLLLYGNHLSGT----I 419 (983)
Q Consensus 352 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~----~~~~~~~~l-~~L~~L~l~~N~l~~~----~ 419 (983)
..+++|+.|++++|.+.+..+..+..+.+ |+.|++++|++++ .+...+..+ ++|+.|++++|.+++. +
T Consensus 78 ~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~ 157 (319)
T cd00116 78 TKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEAL 157 (319)
T ss_pred HhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHH
Confidence 33444444444444444333333322222 5555555554442 111222333 4445555555554421 1
Q ss_pred cccccCCCCCCEEEccCccccCc----CCccccCCCccceeccccCCCCCCC----CccccccccccccccccccccccC
Q 042568 420 PSSLGKCVNLEILDLSHNKISGI----IPSDVAGLRSLKLYLNLSSNHLDGP----LPLELSKMDMVLAIDLSFNNLSGS 491 (983)
Q Consensus 420 p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 491 (983)
+..+..+++|+.|++++|.+++. ++..+...++|+. |++++|.+++. ++..+..+++|+.|++++|.+++.
T Consensus 158 ~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~-L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~ 236 (319)
T cd00116 158 AKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEV-LDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDA 236 (319)
T ss_pred HHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCE-EeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchH
Confidence 22334444555555555555421 1222233334543 55555555432 222334455566666666666542
Q ss_pred CCccccc-----ccccceEEeCCCcccc----cccccccCCCCccEEecCCccccCC----cCccccCC-CCcceEeccC
Q 042568 492 IPPQLGS-----CIALESLNLSGNSLEG----LLPVSVGQLPYLKQFDVSSNRLFGE----IPQSFQAS-PTLKQLNFSF 557 (983)
Q Consensus 492 ~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l-~~L~~l~l~~ 557 (983)
.+..+.. .+.|+.|++++|.++. .+...+..+++|+.+++++|.++.. +...+... +.|+.+++.+
T Consensus 237 ~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (319)
T cd00116 237 GAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKD 316 (319)
T ss_pred HHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCC
Confidence 2222221 2567777777776651 2233444556677777777776643 33334444 5666666666
Q ss_pred Ccc
Q 042568 558 NKF 560 (983)
Q Consensus 558 N~l 560 (983)
|++
T Consensus 317 ~~~ 319 (319)
T cd00116 317 DSF 319 (319)
T ss_pred CCC
Confidence 653
No 442
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.72 E-value=2.2e-18 Score=190.62 Aligned_cols=226 Identities=25% Similarity=0.284 Sum_probs=176.1
Q ss_pred ccccCCcEeEEEEE----ECCCcEEEEEEeecccCcc-hhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEEeccc
Q 042568 674 LIGSGRFGHVYKGV----LQDNTRIAVKVLDLTTTGE-ITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVLPLMS 747 (983)
Q Consensus 674 ~iG~G~~g~Vy~~~----~~~~~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 747 (983)
.+|+|.||.|+.+. .+.|..+|+|+.++..... .......|..++...+ ||.++++...+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999765 2346678999886654321 2235667888899986 9999999999999999999999999
Q ss_pred CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCccc
Q 042568 748 NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDES 827 (983)
Q Consensus 748 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~ 827 (983)
+|.+...+... ..++......+...+|-|++++|+.+ |+|||+|++||+++.+|.+++.|||+++..-...
T Consensus 81 gg~lft~l~~~----~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~-- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKE----VMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK-- 151 (612)
T ss_pred cchhhhccccC----CchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh--
Confidence 99998888753 34677778888899999999999997 9999999999999999999999999998654221
Q ss_pred ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCc
Q 042568 828 VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLD 907 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 907 (983)
..+||..|||||.+. .....+|.||||++++||+||..||..
T Consensus 152 ---------------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--------------------- 193 (612)
T KOG0603|consen 152 ---------------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--------------------- 193 (612)
T ss_pred ---------------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---------------------
Confidence 127899999999998 456789999999999999999999853
Q ss_pred HHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCH
Q 042568 908 PIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSM 955 (983)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 955 (983)
++.. .+...... . ..+....+.+++..+...+|..|.-.
T Consensus 194 ~~~~-~Il~~~~~-~-------p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 194 DTMK-RILKAELE-M-------PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHH-HHhhhccC-C-------chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 1111 11111110 1 12355677788888888888888654
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.70 E-value=7.7e-17 Score=163.78 Aligned_cols=137 Identities=17% Similarity=0.244 Sum_probs=105.1
Q ss_pred CCCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-----CCCCccceeeEEecCC---cee-
Q 042568 670 CPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-----RHRNLIRIITICSKPD---FKA- 740 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~~- 740 (983)
...+.||+|+||.||. ++.....+||++...... ..+.+.+|+++++.+ .||||+++++++.+.. ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~-~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG-GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccc-hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 3467899999999996 443333479988654332 357799999999999 5799999999998764 323
Q ss_pred EEEec--ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHH-HHHhccCCCCeEeecCCCCCeEeCC----CCCEEEc
Q 042568 741 LVLPL--MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGV-AYLHHHSPIKVVHCDLKPSNILLDE----DLTALVA 813 (983)
Q Consensus 741 lv~e~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL-~~LH~~~~~~ivH~Dikp~NiLl~~----~~~~kl~ 813 (983)
+|+|| +.+|+|.+++... .+++. ..++.|++.++ +|||+++ |+||||||+|||++. ++.++|+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~-----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC-----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EEecCCCCcchhHHHHHHcc-----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEE
Confidence 78999 5579999999642 24444 35678888777 9999996 999999999999974 3479999
Q ss_pred cccccc
Q 042568 814 DFGIAK 819 (983)
Q Consensus 814 Dfgla~ 819 (983)
||+.+.
T Consensus 152 Dg~G~~ 157 (210)
T PRK10345 152 DNIGES 157 (210)
T ss_pred ECCCCc
Confidence 954443
No 444
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=3.8e-17 Score=169.30 Aligned_cols=199 Identities=26% Similarity=0.278 Sum_probs=134.1
Q ss_pred CCCCccceeeEEec---------------------------CCceeEEEecccCcccccccccccCcCCCCCHHHHHHHH
Q 042568 722 RHRNLIRIITICSK---------------------------PDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKIC 774 (983)
Q Consensus 722 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~ 774 (983)
+|||||++.++|.+ +...|+||.-.+. +|.+++... ..+.....-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-----~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-----HRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-----CCchHHHHHHH
Confidence 59999999987632 2245788877754 788877643 35566778899
Q ss_pred HHHHHHHHHHhccCCCCeEeecCCCCCeEeC--CCC--CEEEccccccccccCCcccccccCCCCccccccCcccccccc
Q 042568 775 SDVAEGVAYLHHHSPIKVVHCDLKPSNILLD--EDL--TALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGY 850 (983)
Q Consensus 775 ~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~--~~~--~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 850 (983)
.|+++|+.|||++| |.|||+|++|||+. +|+ ..+|+|||.+---....-. .++.+..-..-|.-.-
T Consensus 348 aQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlq-------lpy~S~~Vd~GGNa~l 417 (598)
T KOG4158|consen 348 AQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQ-------LPYESDEVDLGGNAKL 417 (598)
T ss_pred HHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccc-------cccccccccCCCccee
Confidence 99999999999997 99999999999983 443 4679999987532221100 1111111223477788
Q ss_pred ccccccCCCC------CCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCcc
Q 042568 851 IAPEYGMGKR------ASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPI 924 (983)
Q Consensus 851 ~aPE~~~~~~------~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (983)
||||.....+ .-.|+|.|+.|.+.||++....||....+---+...+-. ..+|.
T Consensus 418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe--------------------~qLPa 477 (598)
T KOG4158|consen 418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE--------------------SQLPA 477 (598)
T ss_pred cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh--------------------hhCCC
Confidence 9999876532 136899999999999999999998642110000111100 11111
Q ss_pred ccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 925 YYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 925 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
. .+.++..+.+++...++.||++|++..=...
T Consensus 478 l----p~~vpp~~rqlV~~lL~r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 478 L----PSRVPPVARQLVFDLLKRDPSKRVSPNIAAN 509 (598)
T ss_pred C----cccCChHHHHHHHHHhcCCccccCCccHHHh
Confidence 1 1236677899999999999999998764443
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=2.1e-16 Score=165.02 Aligned_cols=144 Identities=19% Similarity=0.203 Sum_probs=111.8
Q ss_pred CCCCCCccccCCcEeEEEEE--ECCCcEEEEEEeecccCc-----------------------chhHHHHHHHHHHHhcC
Q 042568 668 GFCPSSLIGSGRFGHVYKGV--LQDNTRIAVKVLDLTTTG-----------------------EITGSFKRECQILKRIR 722 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~--~~~~~~vAvK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~ 722 (983)
.|.+.+.||+|+||.||+|. ..+|+.||||.++..... .....+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46778999999999999998 568999999998654211 01134678999999997
Q ss_pred CCC--ccceeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCC
Q 042568 723 HRN--LIRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPS 800 (983)
Q Consensus 723 h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~ 800 (983)
+.. +.+++++ ...++||||++++++...... ........+..++.|++.++++||+.+ +|+||||||+
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~ 178 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEY 178 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChh
Confidence 533 3344443 235899999999888776532 223556667899999999999999985 4999999999
Q ss_pred CeEeCCCCCEEEcccccccccc
Q 042568 801 NILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 801 NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
||+++ ++.++++|||.|....
T Consensus 179 NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hEEEE-CCCEEEEEChhhhccC
Confidence 99999 8899999999987543
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=1.4e-17 Score=180.79 Aligned_cols=128 Identities=25% Similarity=0.443 Sum_probs=108.0
Q ss_pred ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccc
Q 042568 738 FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGI 817 (983)
Q Consensus 738 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgl 817 (983)
..|+.|++|+..+|.+|+..... ....++.....++.|++.|++| ++ .+|||+||.||++..+..+||+|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhh
Confidence 56899999999999999975432 4567888999999999999999 54 89999999999999999999999999
Q ss_pred cccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHh
Q 042568 818 AKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVT 879 (983)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~ellt 879 (983)
........+. ..........+||..||+||.+.+..|+.|+||||+|++++|++.
T Consensus 403 ~ts~~~~~~~-------~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDETV-------APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCCcc-------cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 9876644311 111123344689999999999999999999999999999999998
No 447
>PLN03150 hypothetical protein; Provisional
Probab=99.66 E-value=2.4e-16 Score=187.71 Aligned_cols=153 Identities=31% Similarity=0.522 Sum_probs=129.4
Q ss_pred cccHHhHHHHHHHHHhccCCCccccCCCCCCCCCC----cceeeEEECC--CC--CeEEEEEcccCCcccccccccccCC
Q 042568 30 DQIIRDRASLVTFMSSIISAPEHALESWNSTDVHV----CNWSGVKCNN--SR--NKVVELDLSARSIYGTISPALANLS 101 (983)
Q Consensus 30 ~~~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~----c~w~gv~c~~--~~--~~v~~l~l~~~~l~g~~~~~l~~l~ 101 (983)
.+.+.|.+||+++|+++. +|.. .+|.+ + .| |.|.||.|+. .. .+|+.|+|+++++.|.+|+.+++++
T Consensus 368 ~t~~~~~~aL~~~k~~~~-~~~~--~~W~g-~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLG-LPLR--FGWNG-D-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred ccCchHHHHHHHHHHhcC-Cccc--CCCCC-C-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 456679999999999995 4432 48975 2 23 2799999953 22 3699999999999999999999999
Q ss_pred CCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCccccee
Q 042568 102 SLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYI 181 (983)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L 181 (983)
+|+.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..+++|++|++|+|++|+++|.+|..+.. ...++..+
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~--~~~~~~~l 520 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGG--RLLHRASF 520 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhh--ccccCceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999987751 23455667
Q ss_pred eccccccc
Q 042568 182 DLSNNSLT 189 (983)
Q Consensus 182 ~Ls~N~l~ 189 (983)
++++|...
T Consensus 521 ~~~~N~~l 528 (623)
T PLN03150 521 NFTDNAGL 528 (623)
T ss_pred EecCCccc
Confidence 77776544
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=7e-16 Score=160.10 Aligned_cols=135 Identities=21% Similarity=0.332 Sum_probs=113.4
Q ss_pred CccccCCcEeEEEEEECCCcEEEEEEeecccCc--c-----hhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 673 SLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTG--E-----ITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
+.||+|++|.||+|.. .+..|+||+....... + ...++.+|++++..++|+++.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 5778999986432211 1 124678899999999999998888887777888999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
++|++|.+++... .+ .+..++.+++.+|.++|+.+ ++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999887532 12 78899999999999999996 99999999999999 78999999998864
No 449
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=8.3e-16 Score=157.43 Aligned_cols=138 Identities=20% Similarity=0.224 Sum_probs=109.5
Q ss_pred CCCCCCccccCCcEeEEEEEECCCcEEEEEEeecccCc---------------------chhHHHHHHHHHHHhcCCCC-
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTG---------------------EITGSFKRECQILKRIRHRN- 725 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~h~n- 725 (983)
-|...+.||+|+||.||+|...+|+.||||++...... .....+..|+.++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 37778999999999999999888999999987543210 01123677899999998874
Q ss_pred -ccceeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEe
Q 042568 726 -LIRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILL 804 (983)
Q Consensus 726 -iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl 804 (983)
+.+.++. ...++||||+++++|.+.... .....++.++++++.++|+.+ |+||||||+||++
T Consensus 96 ~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill 158 (198)
T cd05144 96 PVPKPIDW----NRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILV 158 (198)
T ss_pred CCCceeec----CCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEE
Confidence 4444442 345899999999998765431 235678899999999999986 9999999999999
Q ss_pred CCCCCEEEcccccccccc
Q 042568 805 DEDLTALVADFGIAKLVK 822 (983)
Q Consensus 805 ~~~~~~kl~Dfgla~~~~ 822 (983)
++++.++|+|||.+....
T Consensus 159 ~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 159 DDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCcEEEEECCccccCC
Confidence 999999999999996544
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=6e-16 Score=158.92 Aligned_cols=132 Identities=23% Similarity=0.344 Sum_probs=107.8
Q ss_pred ccccCCcEeEEEEEECCCcEEEEEEeecccCc--c-----hhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecc
Q 042568 674 LIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTG--E-----ITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLM 746 (983)
Q Consensus 674 ~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 746 (983)
.||+|+||.||+|.+ ++..|++|........ + ...++.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999995 4788999986432211 1 2356788999999999988766666666677789999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
+|++|.+.+.... ..++.++++++.++|+.+ ++|||++|.||+++ ++.++++|||.+...
T Consensus 80 ~g~~l~~~~~~~~-----------~~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN-----------DELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH-----------HHHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999988765321 078999999999999996 99999999999999 889999999998753
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.62 E-value=1.2e-15 Score=180.24 Aligned_cols=142 Identities=25% Similarity=0.303 Sum_probs=113.8
Q ss_pred HHHhCCCCCCCccccCCcEeEEEEEECCCcEEEEEEe-eccc-Cc-----chhHHHHHHHHHHHhcCCCCccceeeEEec
Q 042568 663 IEATGGFCPSSLIGSGRFGHVYKGVLQDNTRIAVKVL-DLTT-TG-----EITGSFKRECQILKRIRHRNLIRIITICSK 735 (983)
Q Consensus 663 ~~~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~-~~~~-~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 735 (983)
......|...+.||+|+||+||+|.+... .+++|+. .... .. ...+++.+|++++++++|++++....++..
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~ 407 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD 407 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence 33345566789999999999999987644 3444432 2111 11 123568899999999999999988888877
Q ss_pred CCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccc
Q 042568 736 PDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADF 815 (983)
Q Consensus 736 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Df 815 (983)
....++||||+++++|.+++. ....++.++++++.|||+.+ ++|||+||+||++ .++.++|+||
T Consensus 408 ~~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDF 471 (535)
T PRK09605 408 PEEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDF 471 (535)
T ss_pred CCCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeC
Confidence 778899999999999988764 35678999999999999996 9999999999999 6789999999
Q ss_pred cccccc
Q 042568 816 GIAKLV 821 (983)
Q Consensus 816 gla~~~ 821 (983)
|+++..
T Consensus 472 Gla~~~ 477 (535)
T PRK09605 472 GLGKYS 477 (535)
T ss_pred cccccC
Confidence 999753
No 452
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.60 E-value=4.5e-16 Score=180.53 Aligned_cols=220 Identities=25% Similarity=0.298 Sum_probs=139.7
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEe
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLP 744 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 744 (983)
..+|..++.|-.|+||.||.++++ +.+++|+|+-+ .. .+.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~------lilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN------LILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cc------hhhhc--cccccCCccee-----------------
Confidence 357888999999999999999976 46778885321 11 00000 11111222222
Q ss_pred cccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCC
Q 042568 745 LMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGI 824 (983)
Q Consensus 745 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~ 824 (983)
|+=...+... ..++. +++.+++|+|+.+ |+|||+||+|.+++.-|.+|++|||+.+.-...
T Consensus 136 ----gDc~tllk~~----g~lPv--------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 ----GDCATLLKNI----GPLPV--------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred ----chhhhhcccC----CCCcc--------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 2222223221 12222 2378899999997 999999999999999999999999998764221
Q ss_pred ccc--ccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHHHhhC
Q 042568 825 DES--VNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWVKRHY 902 (983)
Q Consensus 825 ~~~--~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~~~~~ 902 (983)
... ....-+.....-.....+||+.|+|||++....|+..+|.|++|+|+||.+.|+.||..... .+
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp-----ee------ 265 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EE------ 265 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH-----HH------
Confidence 100 00000001111122446899999999999999999999999999999999999999864211 11
Q ss_pred CCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCC
Q 042568 903 PHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRP 953 (983)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 953 (983)
.+...+...... + ..-+....++.+++.+.++.+|..|-
T Consensus 266 ------lfg~visd~i~w--p----E~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 266 ------LFGQVISDDIEW--P----EEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ------HHhhhhhhhccc--c----ccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 111111111100 0 00112457888999999999999994
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=1.9e-14 Score=140.66 Aligned_cols=137 Identities=20% Similarity=0.260 Sum_probs=115.4
Q ss_pred CCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCC--CCccceeeEEecCCceeEEEecccC
Q 042568 671 PSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRH--RNLIRIITICSKPDFKALVLPLMSN 748 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~ 748 (983)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .++.++++++...+..++++||+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 35679999999999999864 7899999854432 4678999999999976 5899999988888889999999998
Q ss_pred cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 749 GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 749 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
+.+... +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.+....
T Consensus 78 ~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 78 ETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred eecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 777554 445677889999999999998643459999999999999999999999999987543
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.56 E-value=2.7e-16 Score=170.38 Aligned_cols=179 Identities=32% Similarity=0.509 Sum_probs=122.1
Q ss_pred CCCCcEEEccCccccCcCcccccCcccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceec
Q 042568 378 IPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYL 457 (983)
Q Consensus 378 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L 457 (983)
+.--...||+.|++. .+|..++.+..|+.+.|..|.+. .+|..++++..|++|||+.|+++ ..|..++.++ |+. |
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv-l 148 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV-L 148 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee-E
Confidence 333445666666666 56666666667777777777766 66666777777777777777776 5565665554 444 6
Q ss_pred cccCCCCCCCCccccccccccccccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCcccc
Q 042568 458 NLSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLF 537 (983)
Q Consensus 458 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 537 (983)
-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|++..|++. .+|.++..| .|..||+|.|+++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis 224 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS 224 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee
Confidence 66777776 56666776677777777777776 67777777777777777777777 466666644 3667777777777
Q ss_pred CCcCccccCCCCcceEeccCCccccccCC
Q 042568 538 GEIPQSFQASPTLKQLNFSFNKFSGNISN 566 (983)
Q Consensus 538 ~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 566 (983)
.||..|.+|..|++|-|.+|+|...+..
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLqSPPAq 252 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQSPPAQ 252 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCCCChHH
Confidence 7777777777777777777777655444
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=6.8e-16 Score=180.83 Aligned_cols=257 Identities=27% Similarity=0.384 Sum_probs=194.5
Q ss_pred CCCCCCccccCCcEeEEEEEECC--CcEEEEEEeeccc-CcchhHHHHHHHHHHHhcC-CCCccceeeEEecCCceeEEE
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQD--NTRIAVKVLDLTT-TGEITGSFKRECQILKRIR-HRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~--~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 743 (983)
.|...+.||+|+|+.|-...... ...+|+|.+.... ......+...|..+-+.+. |+|++.+++....++..+++.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 45566779999999998887543 3446777765553 3334455666888888886 999999999999999999999
Q ss_pred ecccCccccccc-ccccCcCCCCCHHHHHHHHHHHHHHHHHHh-ccCCCCeEeecCCCCCeEeCCCC-CEEEcccccccc
Q 042568 744 PLMSNGSLENHL-YPSHGLSHGLDLIQLVKICSDVAEGVAYLH-HHSPIKVVHCDLKPSNILLDEDL-TALVADFGIAKL 820 (983)
Q Consensus 744 e~~~~gsL~~~l-~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH-~~~~~~ivH~Dikp~NiLl~~~~-~~kl~Dfgla~~ 820 (983)
+|.+++++.+.+ +.. ....+......++.|+..++.|+| ..+ +.|||+||+|.+++..+ ..++.|||+|..
T Consensus 101 ~~s~g~~~f~~i~~~~---~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPD---STGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred CcccccccccccccCC---ccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcc
Confidence 999999999888 432 224566677889999999999999 775 99999999999999999 999999999997
Q ss_pred ccCCcccccccCCCCccccccCcccc-ccccccccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHHHH
Q 042568 821 VKGIDESVNCANDSMSFTSTDGLLCG-SVGYIAPEYGMGK-RASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHEWV 898 (983)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~~~ 898 (983)
+....... .......| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++...........|.
T Consensus 175 ~~~~~g~~----------~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~ 244 (601)
T KOG0590|consen 175 YRNKNGAE----------RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK 244 (601)
T ss_pred ccccCCcc----------eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeec
Confidence 76521110 22233467 9999999998884 456789999999999999999999876543333222222
Q ss_pred HhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 042568 899 KRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHE 961 (983)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 961 (983)
.... ......|........++...++..+|..|.+.+++...
T Consensus 245 ~~~~---------------------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 245 SNKG---------------------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cccc---------------------ccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 2210 00112345566778888889999999999999988653
No 456
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.54 E-value=3.2e-14 Score=144.53 Aligned_cols=138 Identities=22% Similarity=0.264 Sum_probs=99.5
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccCcc-hhHH----------------------HHHHHHHHHhcCCCC--c
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGE-ITGS----------------------FKRECQILKRIRHRN--L 726 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~-~~~~----------------------~~~E~~~l~~l~h~n--i 726 (983)
.+.||+|+||.||+|...+++.||||++....... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999986532211 1111 135666666665443 4
Q ss_pred cceeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCCeEeecCCCCCeEeC
Q 042568 727 IRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHH-HSPIKVVHCDLKPSNILLD 805 (983)
Q Consensus 727 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dikp~NiLl~ 805 (983)
.+.+++ ...++||||++++.+........ ... .....++.+++.++.++|. .+ |+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~----~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV----RLL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh----hhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE
Confidence 444443 23589999999865432211110 011 5678899999999999999 75 99999999999999
Q ss_pred CCCCEEEcccccccccc
Q 042568 806 EDLTALVADFGIAKLVK 822 (983)
Q Consensus 806 ~~~~~kl~Dfgla~~~~ 822 (983)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 9999999999997554
No 457
>PLN03150 hypothetical protein; Provisional
Probab=99.53 E-value=1.1e-14 Score=173.70 Aligned_cols=120 Identities=34% Similarity=0.579 Sum_probs=94.6
Q ss_pred ccccccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCccccCCcCccccCCCCcceEecc
Q 042568 477 MVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSFQASPTLKQLNFS 556 (983)
Q Consensus 477 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~ 556 (983)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36678888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCccccccCCC--CCCcccccccccCCcCccCCCCCcccccCC
Q 042568 557 FNKFSGNISNK--GAFSSLTIASFQGNDGLCGEIKGLQTCKKE 597 (983)
Q Consensus 557 ~N~l~~~~~~~--~~~~~~~~~~~~~N~~lc~~~~~~~~c~~~ 597 (983)
+|+++|.+|.. ..+.......+.+|+.+|+.+ ....|...
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p-~l~~C~~~ 540 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP-GLRACGPH 540 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC-CCCCCccc
Confidence 88888887753 112344567889999999965 35678543
No 458
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.50 E-value=1.2e-13 Score=144.78 Aligned_cols=136 Identities=20% Similarity=0.198 Sum_probs=105.2
Q ss_pred CCccc-cCCcEeEEEEEECCCcEEEEEEeeccc------------CcchhHHHHHHHHHHHhcCCCCc--cceeeEEecC
Q 042568 672 SSLIG-SGRFGHVYKGVLQDNTRIAVKVLDLTT------------TGEITGSFKRECQILKRIRHRNL--IRIITICSKP 736 (983)
Q Consensus 672 ~~~iG-~G~~g~Vy~~~~~~~~~vAvK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 736 (983)
...|| .||.|+||++... +..+|||++.... ......++.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45687 8999999999875 7889999885321 11234678899999999998875 6677764332
Q ss_pred C----ceeEEEecccC-cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEE
Q 042568 737 D----FKALVLPLMSN-GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTAL 811 (983)
Q Consensus 737 ~----~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~k 811 (983)
. ..++|+||+++ .+|.+++.. ..++.. .+.++++++.+||+.| |+||||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEE
Confidence 2 22599999997 688887753 224433 3678999999999997 99999999999999999999
Q ss_pred Ecccccccc
Q 042568 812 VADFGIAKL 820 (983)
Q Consensus 812 l~Dfgla~~ 820 (983)
|+|||.++.
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999998874
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.43 E-value=8.4e-15 Score=158.98 Aligned_cols=174 Identities=30% Similarity=0.505 Sum_probs=89.5
Q ss_pred CCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhc
Q 042568 330 LVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLL 409 (983)
Q Consensus 330 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 409 (983)
+.--...||+.|++. .+|..++.+..|+.+.|..|.+. .+| ..++++..|++|+
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip------------------------~~i~~L~~lt~l~ 127 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIP------------------------EAICNLEALTFLD 127 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecc------------------------hhhhhhhHHHHhh
Confidence 333445556666655 55555555555555555555555 444 4444455555555
Q ss_pred ccCccCCCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCCCCCCccccccccccccccccccccc
Q 042568 410 LYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAIDLSFNNLS 489 (983)
Q Consensus 410 l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 489 (983)
|+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+..|.. |+.+.|.+. .+|..++++..|+.|.+..|++.
T Consensus 128 ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~-ld~s~nei~-slpsql~~l~slr~l~vrRn~l~ 202 (722)
T KOG0532|consen 128 LSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAH-LDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE 202 (722)
T ss_pred hccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHH-hhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh
Confidence 5555544 4444444443 555555555554 44444444444443 555555554 44455555555555555555555
Q ss_pred cCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCcccc
Q 042568 490 GSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLF 537 (983)
Q Consensus 490 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 537 (983)
.+|++++. -.|..||+|.|+++ .+|..|.+|..|++|-|.+|.|+
T Consensus 203 -~lp~El~~-LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 203 -DLPEELCS-LPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred -hCCHHHhC-CceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 44444442 23555555555555 45555555555555555555554
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.36 E-value=8.7e-13 Score=150.85 Aligned_cols=179 Identities=34% Similarity=0.494 Sum_probs=96.9
Q ss_pred CCCcEEEccCccccCcCcccccCcc-cchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceec
Q 042568 379 PHLGLLDLSKNKLSGSIPDSFANLS-QLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYL 457 (983)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L 457 (983)
+.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..++.+++|+.|++++|+++ .+|.....++.|+. |
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~-L 191 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNN-L 191 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhh-e
Confidence 44444444444444 3333333332 4555555555554 33344455555555555555554 33333334444443 5
Q ss_pred cccCCCCCCCCccccccccccccccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCcccc
Q 042568 458 NLSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLF 537 (983)
Q Consensus 458 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 537 (983)
++++|+++ .+|........|++|++++|++. .++..+..+.++..|.+++|++. .++..++.+++++.|++++|+++
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccc
Confidence 55555555 34444444445666666666433 45555666666666666666665 33556666666777777777666
Q ss_pred CCcCccccCCCCcceEeccCCccccccCC
Q 042568 538 GEIPQSFQASPTLKQLNFSFNKFSGNISN 566 (983)
Q Consensus 538 ~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 566 (983)
.++. +..+.+++.|++++|.++..+|.
T Consensus 269 -~i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 269 -SISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred -cccc-ccccCccCEEeccCccccccchh
Confidence 4444 66666777777777766655554
No 461
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.35 E-value=2.7e-12 Score=146.36 Aligned_cols=143 Identities=19% Similarity=0.252 Sum_probs=101.3
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccCcch---------------------------------------hHHHH
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEI---------------------------------------TGSFK 712 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~---------------------------------------~~~~~ 712 (983)
.+.||+|++|.||+|++++|+.||||+.+....... .-.|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 467999999999999999999999999753321100 01245
Q ss_pred HHHHHHHhcC-----CCCccceeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHH-HHHHHhc
Q 042568 713 RECQILKRIR-----HRNLIRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAE-GVAYLHH 786 (983)
Q Consensus 713 ~E~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~-aL~~LH~ 786 (983)
+|.+.+.+++ ++++.-..-|.......++||||++|+++.+...... ... .+.+++.++++ .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCC---CHHHHHHHHHHHHHHHHHh
Confidence 5666666652 3333222222233456799999999999988764321 112 23456666666 4678898
Q ss_pred cCCCCeEeecCCCCCeEeCCCCCEEEccccccccccC
Q 042568 787 HSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKG 823 (983)
Q Consensus 787 ~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~ 823 (983)
.| ++|+|+||.||+++.++.++++|||++..+.+
T Consensus 276 ~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 DG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred CC---ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 86 99999999999999999999999999987653
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.33 E-value=8.7e-13 Score=150.85 Aligned_cols=63 Identities=33% Similarity=0.583 Sum_probs=25.8
Q ss_pred cccccccccccccccccccCCCcccccccccceEEeCCCcccccccccccCCCCccEEecCCcccc
Q 042568 472 LSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLF 537 (983)
Q Consensus 472 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 537 (983)
+..+.++..+.+++|++. .++..++.+..|+.|++++|+++. ++. ++.+.+++.|++++|.++
T Consensus 228 ~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 228 LSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred hhhcccccccccCCceee-eccchhccccccceeccccccccc-ccc-ccccCccCEEeccCcccc
Confidence 333333333444444433 223334444444444444444442 222 444444444444444444
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=3.4e-12 Score=130.15 Aligned_cols=208 Identities=18% Similarity=0.240 Sum_probs=142.7
Q ss_pred HHhcCCCCccceeeEEecCC-----ceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCe
Q 042568 718 LKRIRHRNLIRIITICSKPD-----FKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKV 792 (983)
Q Consensus 718 l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~i 792 (983)
+-++-|.|+|++..|+.+.. ...+++|||+.|++.++++.-......+......+|+.||..||.|||+.. ++|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-PPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-Ccc
Confidence 44557999999999986543 457899999999999999876655667888888999999999999999975 579
Q ss_pred EeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHH
Q 042568 793 VHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGV 872 (983)
Q Consensus 793 vH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~ 872 (983)
+|+++..+-|++..++-+|+.--.- ......-.. .. ........|-++|.|||+-.....+..+|||+||+
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap-~s~h~s~~~------~~--~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgm 270 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAP-DSTHPSVNS------TR--EAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGM 270 (458)
T ss_pred ccCCcchhheeecCCceEEecccCc-cccchhhhh------hh--HhhhhccccCCccccCCcCcccccccchhhhhhhH
Confidence 9999999999999999998742111 111000000 00 01122234678999999988888888999999999
Q ss_pred HHHHHHhCCCCCCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCC
Q 042568 873 LLLEIVTGRRPTDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTR 952 (983)
Q Consensus 873 il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 952 (983)
...||..+..--.. ..... ...+.+...+...... .-..++..|++..|..|
T Consensus 271 cAlemailEiq~tn---seS~~----------~~ee~ia~~i~~len~---------------lqr~~i~kcl~~eP~~r 322 (458)
T KOG1266|consen 271 CALEMAILEIQSTN---SESKV----------EVEENIANVIIGLENG---------------LQRGSITKCLEGEPNGR 322 (458)
T ss_pred HHHHHHHheeccCC---Cccee----------ehhhhhhhheeeccCc---------------cccCcCcccccCCCCCC
Confidence 99999998764211 00000 0011111111111100 11244667999999999
Q ss_pred CCHHHHHHHHH
Q 042568 953 PSMLDVAHEMG 963 (983)
Q Consensus 953 Ps~~evl~~L~ 963 (983)
|+|.+++.|.-
T Consensus 323 p~ar~llfHpl 333 (458)
T KOG1266|consen 323 PDARLLLFHPL 333 (458)
T ss_pred cchhhhhcCce
Confidence 99999987643
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.25 E-value=3.2e-11 Score=120.36 Aligned_cols=131 Identities=19% Similarity=0.209 Sum_probs=98.5
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCcc-ceeeEEecCCceeEEEecccCcc
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLI-RIITICSKPDFKALVLPLMSNGS 750 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gs 750 (983)
.+.++.|.++.||++... ++.|++|....... ....+.+|+++++.+.+.+++ +++.+. ....++||||++|.+
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence 356899999999999876 78899998754332 134568899999999765554 444443 234589999999988
Q ss_pred cccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccC--CCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 751 LENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHS--PIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 751 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~--~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
+.+.- .....++.+++++++.||..+ +..++|+|++|.||+++ ++.++++|||.+..
T Consensus 78 l~~~~------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 78 LLTED------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccccc------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 76531 011345679999999999985 22369999999999999 67899999998763
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.21 E-value=1.8e-11 Score=140.77 Aligned_cols=146 Identities=18% Similarity=0.212 Sum_probs=94.3
Q ss_pred CCCCCCccccCCcEeEEEEEECC-CcEEEEEEeecccCc---------------------------------chhH----
Q 042568 668 GFCPSSLIGSGRFGHVYKGVLQD-NTRIAVKVLDLTTTG---------------------------------EITG---- 709 (983)
Q Consensus 668 ~f~~~~~iG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~---------------------------------~~~~---- 709 (983)
.|+. +.||+|++|.||+|++++ |+.||||+......+ +..+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4665 789999999999999887 999999998643110 1111
Q ss_pred --HHHHHHHHHHhcC----CCCccceeeEE-ecCCceeEEEecccCccccccc--ccccCcCCCCCHHHHHHHHHHHHHH
Q 042568 710 --SFKRECQILKRIR----HRNLIRIITIC-SKPDFKALVLPLMSNGSLENHL--YPSHGLSHGLDLIQLVKICSDVAEG 780 (983)
Q Consensus 710 --~~~~E~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~l~~~~~~~i~~~ia~a 780 (983)
+|.+|+..+.+++ +...+.+-.++ ......++||||++|+.+.+.- .........+....+..++.|+.
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-- 277 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-- 277 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH--
Confidence 2344554444442 33333333333 2345678999999999997742 21110011222333333444443
Q ss_pred HHHHhccCCCCeEeecCCCCCeEeCCCC----CEEEccccccccccCC
Q 042568 781 VAYLHHHSPIKVVHCDLKPSNILLDEDL----TALVADFGIAKLVKGI 824 (983)
Q Consensus 781 L~~LH~~~~~~ivH~Dikp~NiLl~~~~----~~kl~Dfgla~~~~~~ 824 (983)
..| ++|+|+||.||+++.++ .+++.|||++..+++.
T Consensus 278 -----~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 278 -----RDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred -----hCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 454 99999999999999888 9999999999887653
No 466
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.20 E-value=3.1e-12 Score=128.42 Aligned_cols=133 Identities=26% Similarity=0.259 Sum_probs=86.2
Q ss_pred CCCCCEEEccCccccCcCCccccCCCccceeccccCCCCCCCCccccccccccccccccccccccCCCcccccccccceE
Q 042568 426 CVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESL 505 (983)
Q Consensus 426 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 505 (983)
...|+.+|||+|.|+ .+.++..-++.++. |++|+|.|.. + ..+..+.+|+.||||+|.++ .+-.+=..+.+.+.|
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~-L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRR-LILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeE-Eeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 344555555555555 34444444455554 5555555542 1 22566677777777777776 555555667778888
Q ss_pred EeCCCcccccccccccCCCCccEEecCCccccCCc-CccccCCCCcceEeccCCccccccC
Q 042568 506 NLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEI-PQSFQASPTLKQLNFSFNKFSGNIS 565 (983)
Q Consensus 506 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~~ 565 (983)
.|++|.+.. -..++.+.+|..||+++|++...- -..++++|-|+.+.|.+|++.+.+.
T Consensus 358 ~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 358 KLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred ehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 888887763 234667777888888888876221 2468888889999999998887653
No 467
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.19 E-value=1.6e-11 Score=137.09 Aligned_cols=252 Identities=23% Similarity=0.213 Sum_probs=179.9
Q ss_pred CCCCCCcccc--CCcEeEEEEEE--C-CCcEEEEEEeecccCc-chhHHHHHHHHHHHhc-CCCCccceeeEEecCCcee
Q 042568 668 GFCPSSLIGS--GRFGHVYKGVL--Q-DNTRIAVKVLDLTTTG-EITGSFKRECQILKRI-RHRNLIRIITICSKPDFKA 740 (983)
Q Consensus 668 ~f~~~~~iG~--G~~g~Vy~~~~--~-~~~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 740 (983)
.|...+.+|+ |.+|.||.+.. . ++..+|+|.-+....+ ....+-.+|+...+++ .|++.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556788999 99999999987 3 5778999986554432 2334456777777777 4999999999999999999
Q ss_pred EEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHH----HHHHHhccCCCCeEeecCCCCCeEeCCC-CCEEEccc
Q 042568 741 LVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAE----GVAYLHHHSPIKVVHCDLKPSNILLDED-LTALVADF 815 (983)
Q Consensus 741 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~----aL~~LH~~~~~~ivH~Dikp~NiLl~~~-~~~kl~Df 815 (983)
+-+|++. .++.++.+.. ..-++....+.+..+..+ |+.++|... ++|-|+||.||+...+ ...+++||
T Consensus 195 iqtE~~~-~sl~~~~~~~---~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTP---CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhcc---cccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCc
Confidence 9999996 6777776643 334677788888888888 999999985 9999999999999999 88999999
Q ss_pred cccccccCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchH
Q 042568 816 GIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLH 895 (983)
Q Consensus 816 gla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~ 895 (983)
|+...+++..-..... ......|...|++||...+ .++..+||||+|.++.+-.++..+...-.. .
T Consensus 268 ~~v~~i~~~~~~~~~~--------~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~--~--- 333 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFK--------VSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN--S--- 333 (524)
T ss_pred ceeEEccCCcccccee--------eeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC--C---
Confidence 9998877544221100 0011247788999998776 457889999999999999998876432100 0
Q ss_pred HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 896 EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
.|... +... +-++.+ .....++...+..|++.+|..|++.+.+..
T Consensus 334 ~W~~~--r~~~--ip~e~~----------------~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 334 SWSQL--RQGY--IPLEFC----------------EGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred Ccccc--cccc--Cchhhh----------------cCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11100 0000 000000 012234445788899999999999876653
No 468
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.16 E-value=6.1e-12 Score=133.24 Aligned_cols=164 Identities=24% Similarity=0.263 Sum_probs=88.7
Q ss_pred CCCCCCCEEeccCccCCCCch--hhhcccccccEEeccCcccccccCCcccccCCCcccceeecccccccCCCCCccccc
Q 042568 122 GSLIRLKQLSLSWNSLQGKIP--SQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECE 199 (983)
Q Consensus 122 ~~l~~L~~L~Ls~n~l~~~~p--~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~ 199 (983)
+++.+|+...|.+..+. ..+ .....+++++.||||+|-+..-.|. ..-+..+++|+.|+||.|.+...+....-..
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v-~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPV-LKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHH-HHHHHhcccchhcccccccccCCccccchhh
Confidence 46677777777777775 333 3556677777777777776622221 1112466777777777776654333333334
Q ss_pred ccccceeecccCcccc-ccchhhhccCCcceecccccccccccchhhhcCCCCccEEEccccccccCCCCCCCccccccc
Q 042568 200 LRNLRFLLLWSNRLVG-QVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASL 278 (983)
Q Consensus 200 l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l 278 (983)
+++|+.|.|+.|.++. .+...+..+++|+.|+|+.|... .+...-...+..|++|+|++|++.+.+. +...
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~-~~~~~~~~i~~~L~~LdLs~N~li~~~~-------~~~~ 267 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEII-LIKATSTKILQTLQELDLSNNNLIDFDQ-------GYKV 267 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhccccc-ceecchhhhhhHHhhccccCCccccccc-------cccc
Confidence 6666777777766652 23334455666666666666321 1111112334556666666665544321 1233
Q ss_pred CCCCCccEEEccCCccc
Q 042568 279 ANSSNFQELELAGNNLG 295 (983)
Q Consensus 279 ~~l~~L~~L~L~~n~l~ 295 (983)
..++.|+.|+++.|.+.
T Consensus 268 ~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 268 GTLPGLNQLNLSSTGIA 284 (505)
T ss_pred ccccchhhhhccccCcc
Confidence 34444444444444443
No 469
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=1.5e-11 Score=130.33 Aligned_cols=163 Identities=23% Similarity=0.170 Sum_probs=80.9
Q ss_pred cccccceeecccCccccccc-hhhhccCCcceecccccccccccc-hhhhcCCCCccEEEccccccccCCCCCCCccccc
Q 042568 199 ELRNLRFLLLWSNRLVGQVP-QALANSSKLEWLDLESNMFSGELP-SEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFA 276 (983)
Q Consensus 199 ~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 276 (983)
++.+|+...|.+........ .....+++++.||||+|-|....+ ..+...+|+|+.|+|+.|++........
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~------ 192 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNT------ 192 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccc------
Confidence 45556666666555542111 355667777777777776653211 2345667777777777777654322110
Q ss_pred ccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEEeccccccCCCC-CcccccCC
Q 042568 277 SLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTI-PHELCLMS 355 (983)
Q Consensus 277 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~ 355 (983)
-..++.|+.|.|+.|+++..--.++....++|+.|+|..|...+.-......++.|++|||++|++-... -...+.++
T Consensus 193 -~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~ 271 (505)
T KOG3207|consen 193 -TLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLP 271 (505)
T ss_pred -hhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccccccccccc
Confidence 0134566666666666653211122222234555555555422222223334455566666665554211 02234445
Q ss_pred CCcEEEeeCCccc
Q 042568 356 KLERVYLSNNSLS 368 (983)
Q Consensus 356 ~L~~L~L~~N~l~ 368 (983)
.|+.|+++.+.+.
T Consensus 272 ~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 272 GLNQLNLSSTGIA 284 (505)
T ss_pred chhhhhccccCcc
Confidence 5555555555554
No 470
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.12 E-value=3.7e-11 Score=117.29 Aligned_cols=126 Identities=33% Similarity=0.369 Sum_probs=32.7
Q ss_pred cCCCCcEEeCcCCcCCCCCccccC-CCCCCCEEeccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCcc
Q 042568 99 NLSSLIVLDLSKNFFQGHIPAELG-SLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTS 177 (983)
Q Consensus 99 ~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 177 (983)
+...+++|+|++|.|+ .|. .++ .+.+|+.|+||+|.|+ .++ .+..|++|++|++++|+|+ .++..+.
T Consensus 17 n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~------- 84 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLD------- 84 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHH-------
T ss_pred cccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchH-------
Confidence 3344555666666555 222 343 3555666666666655 332 3555555666666666555 2222111
Q ss_pred cceeecccccccCCCCCcccccccccceeecccCccccc-cchhhhccCCcceecccccccccccc---hhhhcCCCCcc
Q 042568 178 LQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQ-VPQALANSSKLEWLDLESNMFSGELP---SEIISKMPQLQ 253 (983)
Q Consensus 178 L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~~---~~~~~~l~~L~ 253 (983)
..+++|++|+|++|+|... .-..++.+++|++|+|.+|.++. -+ ..++..+|+|+
T Consensus 85 --------------------~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~-~~~YR~~vi~~lP~Lk 143 (175)
T PF14580_consen 85 --------------------KNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE-KKNYRLFVIYKLPSLK 143 (175)
T ss_dssp --------------------HH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG-STTHHHHHHHH-TT-S
T ss_pred --------------------HhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc-hhhHHHHHHHHcChhh
Confidence 1234444444444444321 11334555566666666666552 12 23355667777
Q ss_pred EEEc
Q 042568 254 FLYL 257 (983)
Q Consensus 254 ~L~L 257 (983)
.||-
T Consensus 144 ~LD~ 147 (175)
T PF14580_consen 144 VLDG 147 (175)
T ss_dssp EETT
T ss_pred eeCC
Confidence 6654
No 471
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.12 E-value=9.6e-10 Score=109.65 Aligned_cols=138 Identities=19% Similarity=0.222 Sum_probs=99.7
Q ss_pred CCccccCCcEeEEEEEECC-------CcEEEEEEeecccC-----------c----------chhHHHH----HHHHHHH
Q 042568 672 SSLIGSGRFGHVYKGVLQD-------NTRIAVKVLDLTTT-----------G----------EITGSFK----RECQILK 719 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~-------~~~vAvK~~~~~~~-----------~----------~~~~~~~----~E~~~l~ 719 (983)
...||.|.-+.||.|...+ +..+|||+++.... + ...+.+. +|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999998553 47899998753311 0 0122233 7999999
Q ss_pred hcCC--CCccceeeEEecCCceeEEEecccCccccc-ccccccCcCCCCCHHHHHHHHHHHHHHHHHH-hccCCCCeEee
Q 042568 720 RIRH--RNLIRIITICSKPDFKALVLPLMSNGSLEN-HLYPSHGLSHGLDLIQLVKICSDVAEGVAYL-HHHSPIKVVHC 795 (983)
Q Consensus 720 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~L-H~~~~~~ivH~ 795 (983)
++.. -++.+++++ ...++||||+.++.+.. .+. ...++......+..+++.++..+ |..+ +||+
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHG 149 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHA 149 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence 9854 456666664 45699999998654422 122 12244556678889999999999 7775 9999
Q ss_pred cCCCCCeEeCCCCCEEEcccccccccc
Q 042568 796 DLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 796 Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
|+++.||+++ ++.+.++|||.|....
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 9999999997 4689999999887543
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.12 E-value=1.7e-11 Score=123.19 Aligned_cols=208 Identities=26% Similarity=0.302 Sum_probs=141.6
Q ss_pred CCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEcc-CccccCcCcccccC
Q 042568 323 IPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLS-KNKLSGSIPDSFAN 401 (983)
Q Consensus 323 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls-~N~l~~~~~~~~~~ 401 (983)
+|-.+.-+++|..+.+|++.-. .+.+....-+.|+.+...+..++.. | .+-....+..+.-+ ..-..|..-.....
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~~~-~-~l~pe~~~~D~~~~E~~t~~G~~~~~~dT 282 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQDV-P-SLLPETILADPSGSEPSTSNGSALVSADT 282 (490)
T ss_pred cccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccccc-c-cccchhhhcCccCCCCCccCCceEEecch
Confidence 3444555667777777776543 2222223345677777766655521 1 11111111111111 11223444444556
Q ss_pred cccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCccccCCCccceeccccCCCCCCCCccccccccccccc
Q 042568 402 LSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAI 481 (983)
Q Consensus 402 l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L 481 (983)
+..|+.++|++|.|+ .+.++..-+|.++.|++|+|.+.. +. .+..+.+|+. ||||+|.++ .+-.|-..+.+++.|
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~-LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQL-LDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-eh-hhhhcccceE-eecccchhH-hhhhhHhhhcCEeee
Confidence 778899999999988 677778888899999999999873 33 3778888886 999999988 566677788899999
Q ss_pred cccccccccCCCcccccccccceEEeCCCccccc-ccccccCCCCccEEecCCccccCCc
Q 042568 482 DLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGL-LPVSVGQLPYLKQFDVSSNRLFGEI 540 (983)
Q Consensus 482 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~ 540 (983)
.|++|.|.. + ..++.+.+|..||+++|+|... --..++++|-|+.+.|.+|.+.+..
T Consensus 358 ~La~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 358 KLAQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred ehhhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 999998862 2 3577888999999999999853 2357899999999999999998543
No 473
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.11 E-value=2.9e-12 Score=132.30 Aligned_cols=247 Identities=26% Similarity=0.337 Sum_probs=129.6
Q ss_pred ccccceeecccCcccc----ccchhhhccCCcceeccccccccc----ccchh------hhcCCCCccEEEccccccccC
Q 042568 200 LRNLRFLLLWSNRLVG----QVPQALANSSKLEWLDLESNMFSG----ELPSE------IISKMPQLQFLYLSYNDFVSH 265 (983)
Q Consensus 200 l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~----~~~~~------~~~~l~~L~~L~Ls~N~l~~~ 265 (983)
+..++.|+|++|.+.. .+...+.+.++|+..++|+- ++| .+|.. .+-..++|++|+||+|-|..
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~- 106 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGP- 106 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCc-
Confidence 3444555555554431 23334444555555555542 222 22221 23345567777777776532
Q ss_pred CCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEEeccccccCC
Q 042568 266 DGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNG 345 (983)
Q Consensus 266 ~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 345 (983)
...+.+-.-+.++.+|++|.|.+|.+.-.--..++ ..|..|. .|. -...-+.|+.+..+.|++..
T Consensus 107 ---~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~---~al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 107 ---KGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG---RALFELA--VNK-------KAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred ---cchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH---HHHHHHH--HHh-------ccCCCcceEEEEeecccccc
Confidence 22334444455677777777777766522111111 1122222 111 11223456666666666542
Q ss_pred CC----CcccccCCCCcEEEeeCCcccCCC----CCCCCCCCCCcEEEccCccccCc----CcccccCcccchhhcccCc
Q 042568 346 TI----PHELCLMSKLERVYLSNNSLSGEI----PSAFGDIPHLGLLDLSKNKLSGS----IPDSFANLSQLRRLLLYGN 413 (983)
Q Consensus 346 ~~----p~~l~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~l~~N 413 (983)
.. ...+...+.|+.+.++.|.|.... ...|..+++|+.|||.+|-++.. +...+..++.|+.|+++.|
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dc 251 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDC 251 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccc
Confidence 21 123444566666666666665221 22355667777777777766532 2344556677777777777
Q ss_pred cCCCCCccccc-----CCCCCCEEEccCccccC----cCCccccCCCccceeccccCCCC
Q 042568 414 HLSGTIPSSLG-----KCVNLEILDLSHNKISG----IIPSDVAGLRSLKLYLNLSSNHL 464 (983)
Q Consensus 414 ~l~~~~p~~l~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~~L~l~~N~l 464 (983)
.+...-..+|. ..++|++|.|.+|.++. .+...+...+.|.. |+|++|.+
T Consensus 252 ll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~k-LnLngN~l 310 (382)
T KOG1909|consen 252 LLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEK-LNLNGNRL 310 (382)
T ss_pred ccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHH-hcCCcccc
Confidence 77643332221 35678888888887762 22334455677775 88888888
No 474
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=9.7e-10 Score=114.98 Aligned_cols=144 Identities=17% Similarity=0.257 Sum_probs=112.3
Q ss_pred CCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCC--CccceeeEEecCC---ceeEEEecc
Q 042568 672 SSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHR--NLIRIITICSKPD---FKALVLPLM 746 (983)
Q Consensus 672 ~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~---~~~lv~e~~ 746 (983)
.+.|+.|..+.||++...+|+.+++|.............+.+|+++++.+++. .+.+++.+..... ..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 35689999999999998767889999975543322356789999999999764 4567777776542 568999999
Q ss_pred cCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccC--------------------------------------
Q 042568 747 SNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHS-------------------------------------- 788 (983)
Q Consensus 747 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~-------------------------------------- 788 (983)
+|.++.+.+.. ..++......++.++++++.+||+..
T Consensus 83 ~G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 83 DGRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CCEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 99988776531 24677778888889999999998421
Q ss_pred ---------------CCCeEeecCCCCCeEeCC--CCCEEEcccccccc
Q 042568 789 ---------------PIKVVHCDLKPSNILLDE--DLTALVADFGIAKL 820 (983)
Q Consensus 789 ---------------~~~ivH~Dikp~NiLl~~--~~~~kl~Dfgla~~ 820 (983)
+..++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66788999998764
No 475
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.09 E-value=1.9e-11 Score=139.86 Aligned_cols=219 Identities=31% Similarity=0.388 Sum_probs=147.3
Q ss_pred CCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchh
Q 042568 328 SNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRR 407 (983)
Q Consensus 328 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 407 (983)
..+..++.+++..|.+.. +-..+..+++|+.|++.+|.|..+ ...+..+++|+.|+|++|+|+...+ +..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhh
Confidence 345566666677777763 334466777777777777777743 2236677788888888888875432 556666888
Q ss_pred hcccCccCCCCCcccccCCCCCCEEEccCccccCcCC-ccccCCCccceeccccCCCCCCCCcccccccccccccccccc
Q 042568 408 LLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIP-SDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAIDLSFN 486 (983)
Q Consensus 408 L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 486 (983)
|++++|.|+. + ..+..++.|+.+++++|+++..-+ . ...+..++. +.+.+|.+. ....+..+..+..+++..|
T Consensus 145 L~l~~N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~-l~l~~n~i~--~i~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 145 LNLSGNLISD-I-SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEE-LDLGGNSIR--EIEGLDLLKKLVLLSLLDN 218 (414)
T ss_pred heeccCcchh-c-cCCccchhhhcccCCcchhhhhhhhh-hhhccchHH-HhccCCchh--cccchHHHHHHHHhhcccc
Confidence 8888888873 2 345567788888888888874433 1 456667775 888888876 3344555666666788888
Q ss_pred ccccCCCccccccc--ccceEEeCCCcccccccccccCCCCccEEecCCccccCCcCccccCCCCcceEeccCCccc
Q 042568 487 NLSGSIPPQLGSCI--ALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSFQASPTLKQLNFSFNKFS 561 (983)
Q Consensus 487 ~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 561 (983)
.++..-+ +..+. .|+.+++++|++. ..+..+..+.++..|++++|++... ..+...+.+..+....|.+.
T Consensus 219 ~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 219 KISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred cceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 8873322 22222 3888888888887 3445667788888888888888643 23445666777777888765
No 476
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.07 E-value=7.4e-10 Score=124.67 Aligned_cols=167 Identities=19% Similarity=0.229 Sum_probs=127.8
Q ss_pred ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEecccCcccccccccccCcCCCCCH
Q 042568 688 LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDL 767 (983)
Q Consensus 688 ~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 767 (983)
..++..|.|..++.... +......+-++.++.+|||||+++++.+...+..|+|+|-+. -|..++.. +..
T Consensus 34 k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------l~~ 103 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------LGK 103 (690)
T ss_pred eccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------hHH
Confidence 44688898988876665 556778888999999999999999999999999999999885 45555543 224
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCccccccCccccc
Q 042568 768 IQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGS 847 (983)
Q Consensus 768 ~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 847 (983)
..+.-.++||+.||.|||+.+ +++|++|.-+.|+++..|+.||++|.++........ ......--
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------------~~~~~~~~ 168 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------------PAKSLYLI 168 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------------ccccchhh
Confidence 556677899999999999877 799999999999999999999999998865432211 00011112
Q ss_pred cccccccccCCCCCCccchhHHHHHHHHHHHhCC
Q 042568 848 VGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGR 881 (983)
Q Consensus 848 ~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~ 881 (983)
-.|..|+.+.... -..|.|.||++++|++.|.
T Consensus 169 ~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 169 ESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred hcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 2456676544332 2469999999999999993
No 477
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.06 E-value=1e-10 Score=114.25 Aligned_cols=132 Identities=27% Similarity=0.346 Sum_probs=50.8
Q ss_pred cCCCCCCCEEeccCccCCCCchhhhc-ccccccEEeccCcccccccCCcccccCCCcccceeecccccccCCCCCccccc
Q 042568 121 LGSLIRLKQLSLSWNSLQGKIPSQLG-SLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECE 199 (983)
Q Consensus 121 ~~~l~~L~~L~Ls~n~l~~~~p~~~~-~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~ 199 (983)
+.+..++++|+|++|.|+ .+ +.++ .+.+|+.|||++|.|+ .++ .+..
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~-~l~-----------------------------~l~~ 62 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQIT-KLE-----------------------------GLPG 62 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-----------------------------T---
T ss_pred cccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCc-ccc-----------------------------CccC
Confidence 444556777777777776 33 2354 4666777777777766 222 2336
Q ss_pred ccccceeecccCccccccchhh-hccCCcceecccccccccccchhhhcCCCCccEEEccccccccCCCCCCCccccccc
Q 042568 200 LRNLRFLLLWSNRLVGQVPQAL-ANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASL 278 (983)
Q Consensus 200 l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l 278 (983)
++.|+.|++++|+|+.. ...+ ..+++|++|+|++|+|...-.-..++.+++|++|+|.+|.+..... --..-+
T Consensus 63 L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~-----YR~~vi 136 (175)
T PF14580_consen 63 LPRLKTLDLSNNRISSI-SEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKN-----YRLFVI 136 (175)
T ss_dssp -TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTT-----HHHHHH
T ss_pred hhhhhhcccCCCCCCcc-ccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhh-----HHHHHH
Confidence 78899999999999854 3344 4789999999999999843333557889999999999999875322 112335
Q ss_pred CCCCCccEEEcc
Q 042568 279 ANSSNFQELELA 290 (983)
Q Consensus 279 ~~l~~L~~L~L~ 290 (983)
..+++|+.||-.
T Consensus 137 ~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 137 YKLPSLKVLDGQ 148 (175)
T ss_dssp HH-TT-SEETTE
T ss_pred HHcChhheeCCE
Confidence 668899998753
No 478
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.05 E-value=7.9e-12 Score=129.08 Aligned_cols=145 Identities=23% Similarity=0.287 Sum_probs=69.1
Q ss_pred CCcceecccccccccccc----hhhhcCCCCccEEEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCc
Q 042568 225 SKLEWLDLESNMFSGELP----SEIISKMPQLQFLYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPS 300 (983)
Q Consensus 225 ~~L~~L~Ls~N~l~~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 300 (983)
++|+++...+|++. .-+ ...+...+.|+++.++.|.|..- ....+...+..+++|+.|||++|-++..-..
T Consensus 157 ~~Lrv~i~~rNrle-n~ga~~~A~~~~~~~~leevr~~qN~I~~e----G~~al~eal~~~~~LevLdl~DNtft~egs~ 231 (382)
T KOG1909|consen 157 PKLRVFICGRNRLE-NGGATALAEAFQSHPTLEEVRLSQNGIRPE----GVTALAEALEHCPHLEVLDLRDNTFTLEGSV 231 (382)
T ss_pred cceEEEEeeccccc-cccHHHHHHHHHhccccceEEEecccccCc----hhHHHHHHHHhCCcceeeecccchhhhHHHH
Confidence 34555555555553 222 22344555666666666655331 1223344455555555555555555422111
Q ss_pred cccccccCeeEEEccCccccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEEEeeCCcccCCCCCCC-CCCC
Q 042568 301 IIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERVYLSNNSLSGEIPSAF-GDIP 379 (983)
Q Consensus 301 ~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~ 379 (983)
.+...+..+++|+.|++++|.+.......+.. ++ ...+
T Consensus 232 ---------------------~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~--------------------al~~~~p 270 (382)
T KOG1909|consen 232 ---------------------ALAKALSSWPHLRELNLGDCLLENEGAIAFVD--------------------ALKESAP 270 (382)
T ss_pred ---------------------HHHHHhcccchheeecccccccccccHHHHHH--------------------HHhccCC
Confidence 11223334445555555555554332222110 11 1245
Q ss_pred CCcEEEccCccccCc----CcccccCcccchhhcccCccC
Q 042568 380 HLGLLDLSKNKLSGS----IPDSFANLSQLRRLLLYGNHL 415 (983)
Q Consensus 380 ~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l 415 (983)
+|+.|.|.+|.|+.. +...+...+.|..|+|++|++
T Consensus 271 ~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 271 SLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred CCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 566666666666521 222344567777777777777
No 479
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04 E-value=9.8e-11 Score=130.81 Aligned_cols=252 Identities=19% Similarity=0.170 Sum_probs=177.0
Q ss_pred HHhCCCCCCCccccCCcEeEEEEEEC--CCcEEEEEEeecccCcchh-HHHHHHHHHHHhc-CCCCccceeeEEecCCce
Q 042568 664 EATGGFCPSSLIGSGRFGHVYKGVLQ--DNTRIAVKVLDLTTTGEIT-GSFKRECQILKRI-RHRNLIRIITICSKPDFK 739 (983)
Q Consensus 664 ~~~~~f~~~~~iG~G~~g~Vy~~~~~--~~~~vAvK~~~~~~~~~~~-~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 739 (983)
.-+.+|..+..||.|.|+.||+...+ ++..||+|........... ..-..|+-+...+ .|.++++.+..+...+..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34567888999999999999998744 5778999977544332211 1223466665555 589999988888888888
Q ss_pred eEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCC-CCEEEcccccc
Q 042568 740 ALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDED-LTALVADFGIA 818 (983)
Q Consensus 740 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~-~~~kl~Dfgla 818 (983)
|+--||+++++...... ....++...++++..|++.++.++|+.. ++|+|+||+||++..+ +..+++|||.+
T Consensus 342 ~ip~e~~~~~s~~l~~~----~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSV----TSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cCchhhhcCcchhhhhH----HHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccc
Confidence 89999999998877662 2345777889999999999999999885 9999999999999886 78889999998
Q ss_pred ccccCCcccccccCCCCccccccCccccccccc--cccccCCCCCCccchhHHHHHHHHHHHhCCCCCCcccCCCCchHH
Q 042568 819 KLVKGIDESVNCANDSMSFTSTDGLLCGSVGYI--APEYGMGKRASTHGDVYSFGVLLLEIVTGRRPTDVLFHDGSSLHE 896 (983)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~~~~~~~~~~l~~ 896 (983)
+.+.-.. ....+.-+++ +|+......+..+.|+||||..+.|.++|..--.. +.....
T Consensus 415 t~~~~~~----------------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~----~~~~~~ 474 (524)
T KOG0601|consen 415 TRLAFSS----------------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES----GVQSLT 474 (524)
T ss_pred cccceec----------------ccccccccccccchhhccccccccccccccccccccccccCcccCcc----ccccee
Confidence 7432111 1112333444 55555667788999999999999999998764211 110000
Q ss_pred HHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHh
Q 042568 897 WVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSMLDVAHEMGRLKQ 967 (983)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 967 (983)
. .....+.. ......+..+...+...++..||.+.++..+.+..+.
T Consensus 475 i--------------------~~~~~p~~-----~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 475 I--------------------RSGDTPNL-----PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred e--------------------ecccccCC-----CchHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 0 00000100 1122556666777899999999999998877666544
No 480
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.03 E-value=4.7e-11 Score=136.64 Aligned_cols=245 Identities=30% Similarity=0.331 Sum_probs=114.1
Q ss_pred CCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCcccEEeccccccCCCCCcccccCCCCcEE
Q 042568 281 SSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLTLLNLSSNLLNGTIPHELCLMSKLERV 360 (983)
Q Consensus 281 l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 360 (983)
+..++.++++.|.+.. +-..+..+ .+|+.|++..|.|.+ +...+..+++|++|++++|+|+... .+..++.|+.|
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~-~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKL-KSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccc-cceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 3455555566665553 11112222 345555555555542 2222444555555555555554331 23344445555
Q ss_pred EeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhcccCccCCCCCcccccCCCCCCEEEccCcccc
Q 042568 361 YLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKIS 440 (983)
Q Consensus 361 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 440 (983)
++++|.|... ..+..+++|+.+++++|++...-+ . . ...+.+++.+++.+|.+.
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~-~----------------------~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIEN-D----------------------E-LSELISLEELDLGGNSIR 199 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhh-h----------------------h-hhhccchHHHhccCCchh
Confidence 5555555421 123334444444555544443222 0 1 244444555555555544
Q ss_pred CcCCccccCCCccceeccccCCCCCCCCccccccccccccccccccccccCCCcccccccccceEEeCCCcccccccccc
Q 042568 441 GIIPSDVAGLRSLKLYLNLSSNHLDGPLPLELSKMDMVLAIDLSFNNLSGSIPPQLGSCIALESLNLSGNSLEGLLPVSV 520 (983)
Q Consensus 441 ~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 520 (983)
. ...+..+..+.. +++..|.++..-+........|+.+++++|.+. .++..+..+..+..|++++|++...- .+
T Consensus 200 ~--i~~~~~~~~l~~-~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~ 273 (414)
T KOG0531|consen 200 E--IEGLDLLKKLVL-LSLLDNKISKLEGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GL 273 (414)
T ss_pred c--ccchHHHHHHHH-hhcccccceeccCcccchhHHHHHHhcccCccc-cccccccccccccccchhhccccccc--cc
Confidence 1 122222333332 445555554222111111113666777777766 44455666677777777777776432 23
Q ss_pred cCCCCccEEecCCccccCC---cCcc-ccCCCCcceEeccCCcccc
Q 042568 521 GQLPYLKQFDVSSNRLFGE---IPQS-FQASPTLKQLNFSFNKFSG 562 (983)
Q Consensus 521 ~~l~~L~~L~ls~N~l~~~---~p~~-~~~l~~L~~l~l~~N~l~~ 562 (983)
.....+..+..+.|.+... .... ....+.+..+.+.+|+...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 274 ERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred cccchHHHhccCcchhcchhhhhccccccccccccccccccCcccc
Confidence 3445566667777765421 1111 3344555555555555543
No 481
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=2.4e-09 Score=102.36 Aligned_cols=132 Identities=25% Similarity=0.316 Sum_probs=102.0
Q ss_pred CccccCCcEeEEEEEECCCcEEEEEE-eecccCc-c-----hhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEEec
Q 042568 673 SLIGSGRFGHVYKGVLQDNTRIAVKV-LDLTTTG-E-----ITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVLPL 745 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~~~~vAvK~-~~~~~~~-~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 745 (983)
..+++|+-+.+|.+.+. |..+++|. +++.... + ...+-.+|+.++.+++--.|...+-+..+++...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 46889999999999875 44466664 3322211 1 234567799999999877777777777888899999999
Q ss_pred ccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccc
Q 042568 746 MSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKL 820 (983)
Q Consensus 746 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~ 820 (983)
++|..|.+.+... ...++..+-+-+.-||..+ |+|+|+.++||++..+. +.++|||++.+
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998888877642 2456666777778899997 99999999999998776 99999999874
No 482
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.97 E-value=3.9e-10 Score=82.63 Aligned_cols=41 Identities=39% Similarity=0.873 Sum_probs=31.4
Q ss_pred HHhHHHHHHHHHhccCCCccccCCCCCCC-CCCcceeeEEEC
Q 042568 33 IRDRASLVTFMSSIISAPEHALESWNSTD-VHVCNWSGVKCN 73 (983)
Q Consensus 33 ~~~~~~ll~~k~~~~~~~~~~l~sw~~~~-~~~c~w~gv~c~ 73 (983)
.+|++||++||+++..+|.+.+.+|+.+. .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57999999999999877888999999763 789999999996
No 483
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.96 E-value=4.6e-09 Score=99.61 Aligned_cols=144 Identities=19% Similarity=0.287 Sum_probs=105.9
Q ss_pred CCCccccCCcEeEEEEEECCCcEEEEEE-eecccC------cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEEE
Q 042568 671 PSSLIGSGRFGHVYKGVLQDNTRIAVKV-LDLTTT------GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALVL 743 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~~~~~~vAvK~-~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 743 (983)
...++-+|+-+.|+++.+. |+...||. +.+... .-...+-++|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4678999999999999987 77766664 322211 113467788999999987666665555666667778999
Q ss_pred ecccC-cccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCC---CEEEccccccc
Q 042568 744 PLMSN-GSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDL---TALVADFGIAK 819 (983)
Q Consensus 744 e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~---~~kl~Dfgla~ 819 (983)
||++| .++.+++.... ...........++..|-+.+.-||..+ |+|+|+..+||++..++ .+.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchh
Confidence 99986 46777665432 222223333788889999999999996 99999999999996554 45899999976
Q ss_pred c
Q 042568 820 L 820 (983)
Q Consensus 820 ~ 820 (983)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 3
No 484
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.94 E-value=3.3e-08 Score=104.86 Aligned_cols=267 Identities=15% Similarity=0.165 Sum_probs=165.9
Q ss_pred CCCccccCCcEeEEEEEECCCcEEEEEEeecccCcchhHHHHHHHHHHHhc-CCCCccc----eeeEE--e-cCCceeEE
Q 042568 671 PSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEITGSFKRECQILKRI-RHRNLIR----IITIC--S-KPDFKALV 742 (983)
Q Consensus 671 ~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~----l~~~~--~-~~~~~~lv 742 (983)
....+|+|+-+.+|-.--- ..-+-|++..+.... -.+.++.|... .||-+-. ..... . ......+.
T Consensus 15 ~gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa~----~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPAA----QAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCccccCCccceeeecchh--hchhheeecCCCchH----HHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 3567999999999865311 123457776554321 11223333333 4554332 11111 1 11224667
Q ss_pred EecccCcc-cccccccc--cCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccc
Q 042568 743 LPLMSNGS-LENHLYPS--HGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAK 819 (983)
Q Consensus 743 ~e~~~~gs-L~~~l~~~--~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~ 819 (983)
|+.+++.- +..+.... +..-...+|....++++.+|.+.+.||..| .+-+|+.++|+|+.+++.+.+.|-....
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEccccee
Confidence 77776531 11122111 111234799999999999999999999997 8889999999999999999998866544
Q ss_pred cccCCcccccccCCCCccccccCccccccccccccccC-----CCCCCccchhHHHHHHHHHHHhC-CCCCCcccCCC--
Q 042568 820 LVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGM-----GKRASTHGDVYSFGVLLLEIVTG-RRPTDVLFHDG-- 891 (983)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~SlG~il~elltg-~~p~~~~~~~~-- 891 (983)
..... . ...-.+|...|.+||... +..-+...|-|.+|+++++++.| ++||.......
T Consensus 166 i~~ng-~-------------~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a 231 (637)
T COG4248 166 INANG-T-------------LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA 231 (637)
T ss_pred eccCC-c-------------eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC
Confidence 33211 1 111247899999999865 33456788999999999999986 99997654221
Q ss_pred -CchH-HHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCC--CCCCCCHHHHHHHHHHhHh
Q 042568 892 -SSLH-EWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYN--PSTRPSMLDVAHEMGRLKQ 967 (983)
Q Consensus 892 -~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d--P~~RPs~~evl~~L~~~~~ 967 (983)
..+. .+....+-. .-+ ......+....-.|+-.+..+..+..+|+... +.-|||++-.+..|.++++
T Consensus 232 p~p~E~~Ia~g~f~y----a~~-----~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 232 PNPLETDIAHGRFAY----ASD-----QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred CCcchhhhhcceeee----chh-----ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 1111 111111111 011 11122233334456677788888999999654 5689999999999988876
Q ss_pred hc
Q 042568 968 YL 969 (983)
Q Consensus 968 ~~ 969 (983)
+.
T Consensus 303 ~L 304 (637)
T COG4248 303 QL 304 (637)
T ss_pred hh
Confidence 54
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.82 E-value=3.9e-09 Score=128.73 Aligned_cols=105 Identities=31% Similarity=0.337 Sum_probs=50.9
Q ss_pred CCcEEeCcCCc--CCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCcccc
Q 042568 102 SLIVLDLSKNF--FQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQ 179 (983)
Q Consensus 102 ~L~~L~Ls~n~--l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~ 179 (983)
.|++|-+..|. +....++.|..++.|+.||||+|.=-+.+|..++.|-+|++|+|++..++ .+|.++. ++.+|.
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~---~Lk~L~ 621 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLG---NLKKLI 621 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHH---HHHhhh
Confidence 34455555443 33222223445555555555554443455555555555555555555554 4555443 444555
Q ss_pred eeecccccccCCCCCcccccccccceeecccC
Q 042568 180 YIDLSNNSLTGEIPLKNECELRNLRFLLLWSN 211 (983)
Q Consensus 180 ~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N 211 (983)
+||+..+.-...+ ....+.+.+|++|.+..-
T Consensus 622 ~Lnl~~~~~l~~~-~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 622 YLNLEVTGRLESI-PGILLELQSLRVLRLPRS 652 (889)
T ss_pred eeccccccccccc-cchhhhcccccEEEeecc
Confidence 5555544433222 233344666666665544
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.81 E-value=4.1e-09 Score=128.52 Aligned_cols=133 Identities=29% Similarity=0.356 Sum_probs=85.4
Q ss_pred cccCCCCcEEeCcCCcCCCCCccccCCCCCCCEEeccCcc--CCCCchhhhcccccccEEeccCcccccccCCcccccCC
Q 042568 97 LANLSSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNS--LQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNS 174 (983)
Q Consensus 97 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~--l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~ 174 (983)
..+....+...+-+|.+. .++....+ ++|++|-+.+|. +....+..|..++.|+.|||++|.=-+++|..++
T Consensus 519 ~~~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~---- 592 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIG---- 592 (889)
T ss_pred ccchhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHh----
Confidence 445567777888888776 45544433 378888888886 5534444577888888888888776667887775
Q ss_pred CcccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceecccccccccccchhhhcCCCCccE
Q 042568 175 STSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQF 254 (983)
Q Consensus 175 l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 254 (983)
.|-+|++|+|++..++ .+|..++++.+|.+|++..+.-...+ +.+...|++|++
T Consensus 593 ------------------------~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~-~~i~~~L~~Lr~ 646 (889)
T KOG4658|consen 593 ------------------------ELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESI-PGILLELQSLRV 646 (889)
T ss_pred ------------------------hhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccc-cchhhhcccccE
Confidence 4555555555555555 56666666666666666665543222 444555666666
Q ss_pred EEccccc
Q 042568 255 LYLSYND 261 (983)
Q Consensus 255 L~Ls~N~ 261 (983)
|.+-.-.
T Consensus 647 L~l~~s~ 653 (889)
T KOG4658|consen 647 LRLPRSA 653 (889)
T ss_pred EEeeccc
Confidence 6665443
No 487
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.80 E-value=3.4e-08 Score=104.53 Aligned_cols=142 Identities=18% Similarity=0.103 Sum_probs=101.6
Q ss_pred CccccCCcEeEEEEEECCCcEEEEEEeecccCcchh----------HHHHHHHHHHHhcCCCCc--cceeeEEec-----
Q 042568 673 SLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTTGEIT----------GSFKRECQILKRIRHRNL--IRIITICSK----- 735 (983)
Q Consensus 673 ~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~----------~~~~~E~~~l~~l~h~ni--v~l~~~~~~----- 735 (983)
+.+-+.....|+++.+ +|+.|.||+.......+.. ..+.+|.+.+.++...+| .+++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444455777766 4788999987443322211 247899999999864444 344556532
Q ss_pred CCceeEEEecccCc-ccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC-------C
Q 042568 736 PDFKALVLPLMSNG-SLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE-------D 807 (983)
Q Consensus 736 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~-------~ 807 (983)
....++|+|++++. +|.+++.... ....+...+..++.++++.+.-||..| |+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCC
Confidence 23468999999976 7888764221 233456677899999999999999997 999999999999975 4
Q ss_pred CCEEEcccccccc
Q 042568 808 LTALVADFGIAKL 820 (983)
Q Consensus 808 ~~~kl~Dfgla~~ 820 (983)
..+.++||+.++.
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6889999998864
No 488
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.80 E-value=1.1e-07 Score=103.85 Aligned_cols=171 Identities=16% Similarity=0.152 Sum_probs=126.3
Q ss_pred CcEeEEEEE-ECCCcEEEEEEeecccCcchhHHHHHHHHHHHhcCCCCccceeeEEec----CCceeEEEecccC-cccc
Q 042568 679 RFGHVYKGV-LQDNTRIAVKVLDLTTTGEITGSFKRECQILKRIRHRNLIRIITICSK----PDFKALVLPLMSN-GSLE 752 (983)
Q Consensus 679 ~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~ 752 (983)
...+.||+. ..||..|++|+++..... ....-..-+++++++.|+|+|++.+++.. .-..++||+|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~-~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQ-STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeecccccc-CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 346789998 458999999999544322 12223445788999999999999998862 2356899999885 4555
Q ss_pred cccccccC-----------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccc
Q 042568 753 NHLYPSHG-----------LSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLV 821 (983)
Q Consensus 753 ~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~ 821 (983)
+.-..... .....++..+|.++.|+..||.++|+.| ...+-+.|.+|+++++.+++|+..|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeee
Confidence 44322111 1234788999999999999999999997 888999999999999999999988887665
Q ss_pred cCCcccccccCCCCccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCC
Q 042568 822 KGIDESVNCANDSMSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRP 883 (983)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p 883 (983)
..... |.+.+ -.+-|.-.||.+++.|.||..-
T Consensus 444 ~~d~~---------------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPT---------------------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCC---------------------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 43210 11111 2367999999999999999764
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.79 E-value=4.3e-08 Score=97.64 Aligned_cols=126 Identities=24% Similarity=0.290 Sum_probs=83.0
Q ss_pred eEEEEEECCCcEEEEEEeecccC------------c-------------chhHHHHHHHHHHHhcCCC--CccceeeEEe
Q 042568 682 HVYKGVLQDNTRIAVKVLDLTTT------------G-------------EITGSFKRECQILKRIRHR--NLIRIITICS 734 (983)
Q Consensus 682 ~Vy~~~~~~~~~vAvK~~~~~~~------------~-------------~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 734 (983)
.||.|...+|..+|||+...... . .......+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999998899999998743210 0 0124567799999999766 456666553
Q ss_pred cCCceeEEEeccc--CcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHH-hccCCCCeEeecCCCCCeEeCCCCCEE
Q 042568 735 KPDFKALVLPLMS--NGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYL-HHHSPIKVVHCDLKPSNILLDEDLTAL 811 (983)
Q Consensus 735 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~L-H~~~~~~ivH~Dikp~NiLl~~~~~~k 811 (983)
...+||||++ |..+..+.... ++......++.+++..+..+ |..| |+|+|+.+.||+++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEE
Confidence 3489999998 54454433211 11234566778888866664 6775 9999999999999988 999
Q ss_pred Eccccccccc
Q 042568 812 VADFGIAKLV 821 (983)
Q Consensus 812 l~Dfgla~~~ 821 (983)
++|||.|...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999988654
No 490
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.78 E-value=2.3e-09 Score=125.70 Aligned_cols=261 Identities=21% Similarity=0.211 Sum_probs=164.6
Q ss_pred hCCCCCCCccccCCcEeEEEEEEC-CCcEEEEEEeecccC--cchhHHHHHHHHHHHhcCCCCccceeeEEecCCceeEE
Q 042568 666 TGGFCPSSLIGSGRFGHVYKGVLQ-DNTRIAVKVLDLTTT--GEITGSFKRECQILKRIRHRNLIRIITICSKPDFKALV 742 (983)
Q Consensus 666 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 742 (983)
.+.|.+.+-+-+|.++.++.+.-. .|...+.|+...... ....+....+-.+.-..++|-++....-+.-....+++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 345666777888999999887743 233334443311100 00112222222222223456555554444445667899
Q ss_pred EecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEcccccccccc
Q 042568 743 LPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVK 822 (983)
Q Consensus 743 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~ 822 (983)
++|..++++...++... ..+..........+.++++|||... +.|||++|.|++...++..+++|||.....+
T Consensus 883 ~~~~~~~~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG----CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hHHhccCCchhhhhcCC----CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccc
Confidence 99999999988887543 3455566677778899999999973 8999999999999999999999999554432
Q ss_pred CC---ccc-------------ccccCCC--CccccccCccccccccccccccCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 042568 823 GI---DES-------------VNCANDS--MSFTSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVTGRRPT 884 (983)
Q Consensus 823 ~~---~~~-------------~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~SlG~il~elltg~~p~ 884 (983)
.. ... ....... ...........||+.|.+||...+......+|.|++|++++|.++|..||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 11 000 0000000 00012234568999999999999999999999999999999999999998
Q ss_pred CcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 042568 885 DVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDVVLELIELGLLCTQYNPSTRPSML 956 (983)
Q Consensus 885 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 956 (983)
....+. .+++.......+. .....+...+..+++...+..+|.+|-.+.
T Consensus 1036 na~tpq-----------------~~f~ni~~~~~~~------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETPQ-----------------QIFENILNRDIPW------PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcchh-----------------hhhhccccCCCCC------CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 753321 1111111111100 011123445667777778888888887665
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.71 E-value=1.2e-08 Score=81.78 Aligned_cols=60 Identities=40% Similarity=0.597 Sum_probs=39.5
Q ss_pred ccceEEeCCCcccccccccccCCCCccEEecCCccccCCcCccccCCCCcceEeccCCcc
Q 042568 501 ALESLNLSGNSLEGLLPVSVGQLPYLKQFDVSSNRLFGEIPQSFQASPTLKQLNFSFNKF 560 (983)
Q Consensus 501 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l 560 (983)
+|+.|++++|+++...+..|..+++|+.|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 466666666666655555666666666666666666655556666777777777776654
No 492
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.70 E-value=8.3e-09 Score=82.79 Aligned_cols=61 Identities=39% Similarity=0.525 Sum_probs=43.3
Q ss_pred CCCcEEeCcCCcCCCCCccccCCCCCCCEEeccCccCCCCchhhhcccccccEEeccCccc
Q 042568 101 SSLIVLDLSKNFFQGHIPAELGSLIRLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKL 161 (983)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l 161 (983)
++|++|+|++|+++...+..|.++++|++|++++|.|+...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4567777777777744445677777777777777777766666777777777777777764
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.62 E-value=3.1e-07 Score=93.45 Aligned_cols=135 Identities=26% Similarity=0.272 Sum_probs=95.7
Q ss_pred CCCCccccCCcEeEEEEEECCCcEEEEEEeecccC---------------------cchhHHHHHHHHHHHhcCCC--Cc
Q 042568 670 CPSSLIGSGRFGHVYKGVLQDNTRIAVKVLDLTTT---------------------GEITGSFKRECQILKRIRHR--NL 726 (983)
Q Consensus 670 ~~~~~iG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~---------------------~~~~~~~~~E~~~l~~l~h~--ni 726 (983)
.+...||-|.-+.||.|..+.|.++|||.-..... ........+|.++|+++... .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 35688999999999999999999999996321100 01234567899999999755 67
Q ss_pred cceeeEEecCCceeEEEecccCcccccccccccCcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCeEeecCCCCCeEeCC
Q 042568 727 IRIITICSKPDFKALVLPLMSNGSLENHLYPSHGLSHGLDLIQLVKICSDVAEGVAYLHHHSPIKVVHCDLKPSNILLDE 806 (983)
Q Consensus 727 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~ 806 (983)
.+.+++ +...+||||++|--|...- ++......++..|++-+.-.-..| |||+|+.+-||++++
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~ 237 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTE 237 (304)
T ss_pred CCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEec
Confidence 777763 4558999999985554322 112223334444444444443454 999999999999999
Q ss_pred CCCEEEcccccccc
Q 042568 807 DLTALVADFGIAKL 820 (983)
Q Consensus 807 ~~~~kl~Dfgla~~ 820 (983)
+|.+.++||--+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 99999999987653
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.55 E-value=3.8e-09 Score=118.46 Aligned_cols=129 Identities=29% Similarity=0.330 Sum_probs=97.8
Q ss_pred CCCEEeccCccCCCCchhhhcccccccEEeccCcccccccCCcccccCCCcccceeecccccccCCCCCcccccccccce
Q 042568 126 RLKQLSLSWNSLQGKIPSQLGSLHQLEYLDLGNNKLVGEIPIPIFCSNSSTSLQYIDLSNNSLTGEIPLKNECELRNLRF 205 (983)
Q Consensus 126 ~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~ 205 (983)
.|..-+.+.|.+. ....++.-++.|+.|||++|+++.. . .+..++.|++|||++|.+. .+|.-..... .|..
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v-~----~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~ 236 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV-D----NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQL 236 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh-H----HHHhcccccccccccchhc-cccccchhhh-hhee
Confidence 4677778888887 7778888889999999999998732 2 2357888999999999888 4553322233 3888
Q ss_pred eecccCccccccchhhhccCCcceecccccccccccchhhhcCCCCccEEEcccccccc
Q 042568 206 LLLWSNRLVGQVPQALANSSKLEWLDLESNMFSGELPSEIISKMPQLQFLYLSYNDFVS 264 (983)
Q Consensus 206 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 264 (983)
|.+++|.++.. ..+.+|.+|+.|||+.|-|++.-.-+.++.+..|+.|+|.+|.+..
T Consensus 237 L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 237 LNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred eeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 99999988732 4578889999999999988865445557778888899999988754
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.52 E-value=1.9e-09 Score=120.88 Aligned_cols=179 Identities=30% Similarity=0.365 Sum_probs=119.8
Q ss_pred CCCCCCCCcccEEeccccccCCCCCcccccC-CCCcEEEeeCCcccC---CCCCC---CCC---CCCCcEEEccCccccC
Q 042568 324 PPHISNLVNLTLLNLSSNLLNGTIPHELCLM-SKLERVYLSNNSLSG---EIPSA---FGD---IPHLGLLDLSKNKLSG 393 (983)
Q Consensus 324 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~---~~p~~---~~~---l~~L~~L~Ls~N~l~~ 393 (983)
|-.+..+.+|+.|.|.++.|.. ...+..+ ..|+.|- -.|.+.. ++... +.+ ...|.+.+.++|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LI-C~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLI-CHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhh-hhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 5567777888888888887762 1111111 1233332 2222221 11111 111 235778888999887
Q ss_pred cCcccccCcccchhhcccCccCCCCCcccccCCCCCCEEEccCccccCcCCc-cccCCCccceeccccCCCCCCCCcccc
Q 042568 394 SIPDSFANLSQLRRLLLYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPS-DVAGLRSLKLYLNLSSNHLDGPLPLEL 472 (983)
Q Consensus 394 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~~L~l~~N~l~~~~p~~~ 472 (983)
....++.-++.|+.|+|++|+++.. +.+..++.|+.|||++|+++ .+|. ...++. |.. |++++|.++.. ..+
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~-L~lrnN~l~tL--~gi 250 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQL-LNLRNNALTTL--RGI 250 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-hee-eeecccHHHhh--hhH
Confidence 5666778888999999999999843 27888999999999999998 4443 223333 776 89999988742 346
Q ss_pred ccccccccccccccccccCCC-cccccccccceEEeCCCccc
Q 042568 473 SKMDMVLAIDLSFNNLSGSIP-PQLGSCIALESLNLSGNSLE 513 (983)
Q Consensus 473 ~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 513 (983)
.+|++|+.||+++|-|++.-- ..++.|..|..|+|.||.+-
T Consensus 251 e~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 251 ENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred HhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 788889999999998875432 23567788999999999874
No 496
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.41 E-value=1.2e-07 Score=107.60 Aligned_cols=158 Identities=23% Similarity=0.328 Sum_probs=104.8
Q ss_pred HHHHHHHHHHhccCCCCeEeecCCCCCeEeCCCCCEEEccccccccccCCcccccccCCCCccccccCcccccccccccc
Q 042568 775 SDVAEGVAYLHHHSPIKVVHCDLKPSNILLDEDLTALVADFGIAKLVKGIDESVNCANDSMSFTSTDGLLCGSVGYIAPE 854 (983)
Q Consensus 775 ~~ia~aL~~LH~~~~~~ivH~Dikp~NiLl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 854 (983)
.+++.|+.|+|..- ++||++|.|++|.+++.+..||+.|+.+....+... ..+..... ...-.......|.|||
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~-~p~~~yd~---~lp~~~~~~~~f~apE 179 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE-YPFSEYDP---PLPLLLQPHLNFLAPE 179 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCc-cccccCCC---CCChhhccCcccccch
Confidence 34558999999876 799999999999999999999999998875544222 11111111 1111234566899999
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHhCCCC-CCcccCCCCchHHHHHhhCCCCCcHHHHHHHhhcCCCCCccccccchHHH
Q 042568 855 YGMGKRASTHGDVYSFGVLLLEIVTGRRP-TDVLFHDGSSLHEWVKRHYPHRLDPIVEKAIAKYAPQHMPIYYNKVWSDV 933 (983)
Q Consensus 855 ~~~~~~~~~k~Dv~SlG~il~elltg~~p-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (983)
++.+...+.++|+||+|+.+|.+..|..+ ++. .+ ...... .+........ .....+.
T Consensus 180 ~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a-~~-~~~~~~-------------~~~~~~~~~~-------~~~s~~~ 237 (700)
T KOG2137|consen 180 YLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAA-NG-GLLSYS-------------FSRNLLNAGA-------FGYSNNL 237 (700)
T ss_pred hhccccccccccceeeeeEEEEEecCCcchhhc-cC-Ccchhh-------------hhhccccccc-------ccccccC
Confidence 99998889999999999999999955544 321 11 010000 0000000000 0011346
Q ss_pred HHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 042568 934 VLELIELGLLCTQYNPSTRPSMLDVAH 960 (983)
Q Consensus 934 ~~~l~~l~~~cl~~dP~~RPs~~evl~ 960 (983)
+.++.+-+.+++..++..||++.++..
T Consensus 238 p~el~~~l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 238 PSELRESLKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred cHHHHHHHHHHhcCCcccCcchhhhhc
Confidence 678888888999999999998877763
No 497
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.39 E-value=1.5e-06 Score=89.14 Aligned_cols=107 Identities=25% Similarity=0.300 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHhcCCCC--ccceeeEEecCC----ceeEEEecccCc-ccccccccccCcCCCCCHHHHHHHHHHHHHH
Q 042568 708 TGSFKRECQILKRIRHRN--LIRIITICSKPD----FKALVLPLMSNG-SLENHLYPSHGLSHGLDLIQLVKICSDVAEG 780 (983)
Q Consensus 708 ~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~a 780 (983)
..+..+|...+.+++... ..+.+++..... ..++|+|++++. +|.+++.... ..+......++.++++.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~----~~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE----QLDPSQRRELLRALARL 130 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc----ccchhhHHHHHHHHHHH
Confidence 457888999988886443 456666665432 348999999874 7888876422 25566788999999999
Q ss_pred HHHHhccCCCCeEeecCCCCCeEeCCCC---CEEEccccccccc
Q 042568 781 VAYLHHHSPIKVVHCDLKPSNILLDEDL---TALVADFGIAKLV 821 (983)
Q Consensus 781 L~~LH~~~~~~ivH~Dikp~NiLl~~~~---~~kl~Dfgla~~~ 821 (983)
++-||..| |+|+|+++.|||++.+. .+.++||+-++..
T Consensus 131 i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 131 IAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999997 99999999999999887 8999999987754
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.38 E-value=2.1e-08 Score=89.93 Aligned_cols=109 Identities=28% Similarity=0.353 Sum_probs=64.7
Q ss_pred ccEEeccccccCCCCCcc---cccCCCCcEEEeeCCcccCCCCCCCCCCCCCcEEEccCccccCcCcccccCcccchhhc
Q 042568 333 LTLLNLSSNLLNGTIPHE---LCLMSKLERVYLSNNSLSGEIPSAFGDIPHLGLLDLSKNKLSGSIPDSFANLSQLRRLL 409 (983)
Q Consensus 333 L~~L~Ls~N~l~~~~p~~---l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 409 (983)
+..++|++|++- .+++. +.....|+..+|++|.+....+..-..++.++.|+|++|+|+ .+|..+..++.|+.|+
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 344455555443 23332 233344555566666666443333344556777777777776 5666677777777777
Q ss_pred ccCccCCCCCcccccCCCCCCEEEccCccccCcCCc
Q 042568 410 LYGNHLSGTIPSSLGKCVNLEILDLSHNKISGIIPS 445 (983)
Q Consensus 410 l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 445 (983)
++.|.+. ..|..+..+.+|..|+..+|.+. .+|-
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 7777776 55666666777777777777665 3443
No 499
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.36 E-value=6.9e-08 Score=97.75 Aligned_cols=61 Identities=20% Similarity=0.175 Sum_probs=30.3
Q ss_pred CeeEEEccCcccccc-CCCCCCCCCcccEEeccccccCCCC-CcccccCCCCcEEEeeCCccc
Q 042568 308 NLVQIHLDCNLIYGK-IPPHISNLVNLTLLNLSSNLLNGTI-PHELCLMSKLERVYLSNNSLS 368 (983)
Q Consensus 308 ~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~ 368 (983)
++..+.+..|.+... --.....++.+-.|+|+.|+|...- -+.+.+++.|..|.+++|.+.
T Consensus 200 nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 200 NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred cchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 344445555544321 1223344555556666666665221 123455556666666666555
No 500
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.35 E-value=1.1e-08 Score=103.37 Aligned_cols=184 Identities=24% Similarity=0.261 Sum_probs=107.2
Q ss_pred cccceeecccccccCCCCCcccccccccceeecccCccccccchhhhccCCcceeccccc-ccccccchhhhcCCCCccE
Q 042568 176 TSLQYIDLSNNSLTGEIPLKNECELRNLRFLLLWSNRLVGQVPQALANSSKLEWLDLESN-MFSGELPSEIISKMPQLQF 254 (983)
Q Consensus 176 ~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~~~~~~~~~l~~L~~ 254 (983)
+.|++||||+-.|+..--...+..+.+|+.|.|.++++.+.+...++.-.+|+.|+|+.+ .++..--.-++.+++.|.+
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 346666666666553222334456777888888888888777777888888888888775 3442222345667777777
Q ss_pred EEccccccccCCCCCCCcccccccCCCCCccEEEccCCcccccCCccccccccCeeEEEccCccccccCCCCCCCCCccc
Q 042568 255 LYLSYNDFVSHDGNTNLEPFFASLANSSNFQELELAGNNLGGMIPSIIGDLSTNLVQIHLDCNLIYGKIPPHISNLVNLT 334 (983)
Q Consensus 255 L~Ls~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 334 (983)
|+|++|.+.... ++.....+ ..+|+.|+|+++.-. ....-+..-...+++|.
T Consensus 265 LNlsWc~l~~~~----Vtv~V~hi--se~l~~LNlsG~rrn----------------------l~~sh~~tL~~rcp~l~ 316 (419)
T KOG2120|consen 265 LNLSWCFLFTEK----VTVAVAHI--SETLTQLNLSGYRRN----------------------LQKSHLSTLVRRCPNLV 316 (419)
T ss_pred cCchHhhccchh----hhHHHhhh--chhhhhhhhhhhHhh----------------------hhhhHHHHHHHhCCcee
Confidence 777777654321 11111111 134444444443111 00000111123467788
Q ss_pred EEeccccc-cCCCCCcccccCCCCcEEEeeCCcccCCCCCC---CCCCCCCcEEEccCc
Q 042568 335 LLNLSSNL-LNGTIPHELCLMSKLERVYLSNNSLSGEIPSA---FGDIPHLGLLDLSKN 389 (983)
Q Consensus 335 ~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~Ls~N 389 (983)
+||||+|. ++......|.+++.|++|.++.|.. ++|.. +...|.|.+||+.+.
T Consensus 317 ~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 317 HLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred eeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 88888765 3333334566778888888888874 35553 566788888887764
Done!