Query 042575
Match_columns 169
No_of_seqs 151 out of 432
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 12:53:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042575.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042575hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wff_A Riken cDNA 2810002D23 p 99.9 1.2E-29 4E-34 184.6 0.4 58 106-163 25-83 (85)
2 1wfh_A Zinc finger (AN1-like) 99.9 1.3E-26 4.4E-31 160.7 1.1 49 106-154 15-63 (64)
3 1wg2_A Zinc finger (AN1-like) 99.9 4E-26 1.4E-30 158.3 1.7 48 106-153 15-62 (64)
4 1wfl_A Zinc finger protein 216 99.9 6.6E-25 2.3E-29 155.9 4.2 47 106-152 25-71 (74)
5 1wfp_A Zinc finger (AN1-like) 99.9 6.6E-25 2.2E-29 155.9 1.8 48 106-153 25-72 (74)
6 1x4w_A Hypothetical protein FL 99.9 4.4E-25 1.5E-29 154.3 -0.2 48 106-153 15-65 (67)
7 2kzy_A ZNF216-A20, zfand5 prot 99.7 2.1E-17 7.2E-22 113.8 4.1 36 4-39 11-46 (62)
8 2c7n_A Rabex-5, GEF 1, RAB gua 99.6 6.9E-17 2.4E-21 114.4 3.1 35 3-37 13-47 (74)
9 3oj3_I Tumor necrosis factor a 99.6 5E-16 1.7E-20 102.0 2.9 30 5-34 17-47 (49)
10 1wfe_A Riken cDNA 2310008M20 p 99.3 1.1E-12 3.7E-17 95.3 2.5 55 106-169 25-82 (86)
11 1wys_A Riken cDNA 2310008M20 p 99.2 2.6E-12 9E-17 91.3 2.6 40 106-146 14-56 (75)
12 1x4v_A Hypothetical protein LO 99.2 2.6E-12 8.8E-17 88.6 2.4 37 106-143 12-51 (63)
13 2eqe_A Tumor necrosis factor, 97.9 7.3E-06 2.5E-10 53.2 3.0 30 4-33 13-43 (48)
14 1wfk_A Zinc finger, FYVE domai 93.2 0.055 1.9E-06 38.4 2.8 28 106-133 9-39 (88)
15 1vfy_A Phosphatidylinositol-3- 93.0 0.04 1.4E-06 37.6 1.7 29 106-134 11-42 (73)
16 2yw8_A RUN and FYVE domain-con 92.0 0.063 2.2E-06 37.3 1.8 28 106-133 19-49 (82)
17 1joc_A EEA1, early endosomal a 91.6 0.067 2.3E-06 40.2 1.7 28 106-133 69-99 (125)
18 1x4u_A Zinc finger, FYVE domai 91.2 0.097 3.3E-06 36.5 2.0 28 106-133 14-44 (84)
19 1z2q_A LM5-1; membrane protein 90.7 0.1 3.5E-06 36.4 1.8 28 106-133 21-51 (84)
20 1dvp_A HRS, hepatocyte growth 90.6 0.1 3.6E-06 41.9 2.0 28 106-133 161-191 (220)
21 3t7l_A Zinc finger FYVE domain 89.8 0.13 4.4E-06 36.4 1.7 28 106-133 20-50 (90)
22 3zyq_A Hepatocyte growth facto 89.3 0.15 5.2E-06 41.4 2.0 28 106-133 164-194 (226)
23 1y02_A CARP2, FYVE-ring finger 88.1 0.19 6.5E-06 37.9 1.7 41 106-146 19-65 (120)
24 4b6d_A RAC GTPase-activating p 85.6 0.26 9E-06 32.7 1.1 23 106-128 19-44 (61)
25 2vrw_B P95VAV, VAV1, proto-onc 83.9 0.41 1.4E-05 40.9 1.9 40 106-146 357-400 (406)
26 3c5k_A HD6, histone deacetylas 80.1 0.68 2.3E-05 34.1 1.6 30 106-139 24-54 (109)
27 2eqf_A Tumor necrosis factor, 78.9 0.87 3E-05 28.9 1.6 24 8-31 12-35 (46)
28 3mpx_A FYVE, rhogef and PH dom 78.9 0.4 1.4E-05 41.1 0.0 28 106-133 375-405 (434)
29 1ptq_A Protein kinase C delta 72.1 1.9 6.4E-05 26.4 1.8 23 106-128 11-37 (50)
30 2enz_A NPKC-theta, protein kin 70.7 4.2 0.00014 26.5 3.4 24 106-129 23-50 (65)
31 1kbe_A Kinase suppressor of RA 70.0 1.6 5.4E-05 27.9 1.1 23 106-129 14-37 (49)
32 2yuu_A NPKC-delta, protein kin 66.8 2.6 8.8E-05 28.9 1.8 24 106-129 28-55 (83)
33 1faq_A RAF-1; transferase, ser 66.4 2 7E-05 26.5 1.1 23 106-129 14-37 (52)
34 2eqg_A Tumor necrosis factor, 65.6 3.8 0.00013 26.3 2.3 26 8-33 13-39 (49)
35 1r79_A Diacylglycerol kinase, 65.4 3.1 0.00011 29.3 2.0 23 106-128 38-65 (84)
36 2fnf_X Putative RAS effector N 64.4 3 0.0001 28.2 1.7 24 106-129 35-59 (72)
37 3uej_A NPKC-delta, protein kin 63.4 3.4 0.00012 26.9 1.8 23 106-128 20-46 (65)
38 2gmg_A Hypothetical protein PF 62.6 3.4 0.00012 30.6 1.8 26 115-142 62-88 (105)
39 1rfh_A RAS association (ralgds 61.9 2.7 9.2E-05 27.2 1.0 23 106-128 22-45 (59)
40 3ky9_A Proto-oncogene VAV; cal 60.1 3.6 0.00012 37.1 1.9 38 106-144 529-570 (587)
41 3h0g_L DNA-directed RNA polyme 57.9 4.9 0.00017 27.1 1.8 25 106-130 21-49 (63)
42 1z60_A TFIIH basal transcripti 57.9 3.3 0.00011 27.5 0.9 36 107-142 16-56 (59)
43 2eli_A Protein kinase C alpha 56.9 7.9 0.00027 26.6 2.8 42 106-147 28-73 (85)
44 1y8f_A UNC-13 homolog A, MUNC1 55.6 5.2 0.00018 26.1 1.6 23 106-128 24-50 (66)
45 2enn_A NPKC-theta, protein kin 53.6 4.6 0.00016 27.4 1.1 24 106-129 34-61 (77)
46 4gzn_C ZFP-57, zinc finger pro 53.5 4.6 0.00016 25.8 1.1 26 106-131 4-44 (60)
47 2co8_A NEDD9 interacting prote 51.6 11 0.00037 25.1 2.8 29 107-135 43-73 (82)
48 2db6_A SH3 and cysteine rich d 51.2 4.1 0.00014 27.4 0.6 24 106-129 28-55 (74)
49 2lce_A B-cell lymphoma 6 prote 49.9 11 0.00036 23.5 2.4 26 106-131 17-57 (74)
50 1ef4_A Subunit N, DNA-directed 49.0 4.9 0.00017 26.6 0.6 13 106-118 3-15 (55)
51 1twf_J DNA-directed RNA polyme 47.7 6.1 0.00021 27.3 1.0 13 106-118 4-16 (70)
52 3j21_g 50S ribosomal protein L 46.4 6.5 0.00022 25.4 0.9 23 106-128 14-37 (51)
53 4gne_A Histone-lysine N-methyl 43.4 12 0.00041 27.3 2.1 28 106-136 58-86 (107)
54 1bbo_A Human enhancer-binding 42.4 13 0.00044 21.6 1.8 11 120-130 29-40 (57)
55 1vd4_A Transcription initiatio 41.6 9.2 0.00031 23.5 1.1 25 106-130 14-50 (62)
56 3j21_i 50S ribosomal protein L 41.5 11 0.00038 26.7 1.6 27 106-133 35-67 (83)
57 2lv2_A Insulinoma-associated p 41.4 16 0.00056 24.7 2.4 26 106-131 28-68 (85)
58 3iz5_m 60S ribosomal protein L 40.8 12 0.00041 27.0 1.7 28 106-134 36-69 (92)
59 2uzg_A Ubiquitin carboxyl-term 40.6 14 0.00048 26.2 2.1 31 106-139 25-58 (97)
60 1wd2_A Ariadne-1 protein homol 39.8 11 0.00039 24.5 1.3 29 106-134 6-41 (60)
61 3f6q_B LIM and senescent cell 39.4 8.1 0.00028 24.3 0.5 27 107-133 40-66 (72)
62 4ayb_N DNA-directed RNA polyme 39.1 8.7 0.0003 26.2 0.7 13 106-118 4-16 (66)
63 1x68_A FHL5 protein; four-and- 38.8 16 0.00054 23.6 2.0 29 107-135 36-64 (76)
64 2elq_A Zinc finger protein 406 38.5 12 0.00043 19.6 1.2 11 120-130 9-20 (36)
65 2kwq_A Protein MCM10 homolog; 38.2 13 0.00044 26.8 1.5 20 120-139 48-67 (92)
66 1x6e_A Zinc finger protein 24; 38.1 23 0.00077 21.8 2.6 25 106-130 14-53 (72)
67 1x5w_A Zinc finger protein 64, 36.4 20 0.00069 21.9 2.1 11 106-116 9-19 (70)
68 2adr_A ADR1; transcription reg 36.1 17 0.00059 21.3 1.7 11 120-130 30-41 (60)
69 2d8x_A Protein pinch; LIM doma 35.5 11 0.00036 24.0 0.7 27 107-133 32-58 (70)
70 2ayj_A 50S ribosomal protein L 35.4 11 0.00037 25.0 0.7 23 106-128 19-42 (56)
71 2eps_A POZ-, at HOOK-, and zin 35.1 23 0.00079 20.7 2.2 25 106-130 12-52 (54)
72 1znf_A 31ST zinc finger from X 34.7 11 0.00039 18.1 0.6 11 121-131 2-13 (27)
73 2d8t_A Dactylidin, ring finger 34.7 28 0.00096 22.0 2.7 47 106-153 15-64 (71)
74 1e0f_I Haemadin, factor IIA; c 34.6 21 0.00071 23.1 1.9 30 117-146 13-42 (57)
75 3uk3_C Zinc finger protein 217 34.5 19 0.00066 20.8 1.7 25 106-130 4-43 (57)
76 2csz_A Synaptotagmin-like prot 33.7 17 0.0006 25.3 1.6 30 106-135 25-58 (76)
77 2m0d_A Zinc finger and BTB dom 33.4 12 0.00043 18.1 0.6 11 120-130 3-14 (30)
78 2kvf_A Zinc finger and BTB dom 33.1 13 0.00044 18.1 0.6 12 120-131 3-15 (28)
79 3cc2_Z 50S ribosomal protein L 33.0 14 0.00047 27.8 1.0 30 106-135 60-94 (116)
80 2ysj_A Tripartite motif-contai 33.0 17 0.00058 22.4 1.3 25 106-131 20-44 (63)
81 1ard_A Yeast transcription fac 32.8 12 0.00041 18.2 0.5 10 121-130 3-13 (29)
82 2kvh_A Zinc finger and BTB dom 32.6 13 0.00045 18.1 0.6 11 120-130 3-14 (27)
83 2lvu_A Zinc finger and BTB dom 38.0 9.8 0.00034 18.4 0.0 12 121-132 3-15 (26)
84 2m0f_A Zinc finger and BTB dom 31.7 14 0.00046 17.9 0.6 10 121-130 3-13 (29)
85 2row_A RHO-associated protein 31.5 12 0.00042 26.2 0.5 40 106-145 35-83 (84)
86 2zet_C Melanophilin; complex, 31.4 20 0.00067 27.6 1.7 29 106-134 68-100 (153)
87 2elx_A Zinc finger protein 406 31.3 17 0.00058 18.6 1.0 10 120-129 7-17 (35)
88 1srk_A Zinc finger protein ZFP 30.9 17 0.00059 18.8 1.0 11 120-130 7-18 (35)
89 2gqj_A Zinc finger protein KIA 30.9 13 0.00045 24.7 0.6 26 106-131 24-66 (98)
90 1e4u_A Transcriptional repress 30.9 17 0.00059 24.4 1.1 26 106-131 11-39 (78)
91 2kvg_A Zinc finger and BTB dom 30.7 13 0.00046 18.3 0.4 11 120-130 3-14 (27)
92 1x61_A Thyroid receptor intera 30.4 16 0.00053 23.2 0.8 26 107-132 34-59 (72)
93 1x64_A Alpha-actinin-2 associa 30.4 14 0.00047 24.8 0.6 11 106-116 25-35 (89)
94 1klr_A Zinc finger Y-chromosom 30.4 13 0.00045 18.0 0.4 10 121-130 3-13 (30)
95 1nyp_A Pinch protein; LIM doma 30.3 14 0.0005 23.0 0.6 27 107-133 32-58 (66)
96 1x4l_A Skeletal muscle LIM-pro 30.2 15 0.00053 23.3 0.8 27 107-133 36-62 (72)
97 2ctd_A Zinc finger protein 512 30.0 18 0.00061 24.5 1.1 11 106-116 34-44 (96)
98 1zbd_B Rabphilin-3A; G protein 29.8 23 0.00079 26.6 1.8 29 106-134 55-87 (134)
99 1paa_A Yeast transcription fac 29.8 14 0.00048 18.2 0.4 11 121-131 3-14 (30)
100 2m0e_A Zinc finger and BTB dom 29.6 14 0.00049 17.7 0.4 11 121-131 3-14 (29)
101 1p7a_A BF3, BKLF, kruppel-like 29.6 20 0.00069 18.7 1.1 9 106-114 11-19 (37)
102 2elo_A Zinc finger protein 406 29.3 18 0.00063 18.9 0.9 10 120-129 9-19 (37)
103 1g47_A Pinch protein; LIM doma 28.6 15 0.00052 23.6 0.5 24 108-131 41-64 (77)
104 1vq8_Z 50S ribosomal protein L 28.5 19 0.00067 25.1 1.1 31 106-136 27-62 (83)
105 2ysl_A Tripartite motif-contai 28.5 21 0.00073 22.4 1.2 26 106-132 20-45 (73)
106 1yop_A KTI11P; zinc finger, me 28.3 15 0.00051 25.9 0.4 13 119-131 22-34 (83)
107 2ehe_A Four and A half LIM dom 28.2 30 0.001 22.5 2.0 29 107-135 44-72 (82)
108 3pfq_A PKC-B, PKC-beta, protei 27.7 39 0.0013 30.8 3.2 41 106-146 113-157 (674)
109 1rik_A E6APC1 peptide; E6-bind 27.6 18 0.00061 17.6 0.6 11 121-131 3-14 (29)
110 2elt_A Zinc finger protein 406 27.6 22 0.00074 18.4 1.0 10 120-129 9-19 (36)
111 1x4k_A Skeletal muscle LIM-pro 27.4 18 0.00062 22.9 0.7 27 107-133 34-60 (72)
112 2lvt_A Zinc finger and BTB dom 33.0 13 0.00046 18.2 0.0 13 120-132 2-15 (29)
113 2yur_A Retinoblastoma-binding 26.8 52 0.0018 21.0 3.0 26 106-132 15-41 (74)
114 2elp_A Zinc finger protein 406 26.3 26 0.0009 18.3 1.2 11 120-130 9-20 (37)
115 2jr7_A DPH3 homolog; DESR1, CS 26.3 17 0.00059 25.9 0.5 12 118-129 21-32 (89)
116 1twf_L ABC10-alpha, DNA-direct 25.9 21 0.00071 24.2 0.8 22 106-127 28-53 (70)
117 2elv_A Zinc finger protein 406 25.9 24 0.00082 18.4 1.0 10 120-129 9-19 (36)
118 2csy_A Zinc finger protein 183 25.8 52 0.0018 21.2 2.8 25 106-131 15-39 (81)
119 1wyh_A SLIM 2, skeletal muscle 25.8 20 0.00069 22.6 0.7 27 107-133 34-60 (72)
120 2ecj_A Tripartite motif-contai 25.7 60 0.002 19.2 2.9 25 106-131 15-39 (58)
121 2elm_A Zinc finger protein 406 25.4 23 0.00078 18.9 0.8 12 120-131 9-21 (37)
122 2elr_A Zinc finger protein 406 25.3 24 0.00081 18.2 0.9 9 106-114 9-17 (36)
123 2cot_A Zinc finger protein 435 25.2 36 0.0012 21.0 1.9 25 106-130 18-57 (77)
124 1jm7_B BARD1, BRCA1-associated 25.1 31 0.0011 24.1 1.7 26 106-132 22-48 (117)
125 1x62_A C-terminal LIM domain p 25.1 12 0.00042 24.5 -0.5 23 108-130 43-65 (79)
126 1a7i_A QCRP2 (LIM1); LIM domai 25.0 20 0.00067 23.4 0.6 26 107-132 35-60 (81)
127 2d8z_A Four and A half LIM dom 24.8 22 0.00074 22.4 0.7 26 107-132 32-57 (70)
128 2els_A Zinc finger protein 406 24.8 24 0.00083 18.3 0.8 11 120-130 9-20 (36)
129 2cu8_A Cysteine-rich protein 2 24.8 29 0.001 22.2 1.4 25 107-131 37-61 (76)
130 2ct2_A Tripartite motif protei 24.5 60 0.0021 20.9 3.0 26 106-131 15-43 (88)
131 2dar_A PDZ and LIM domain prot 24.5 23 0.00077 23.7 0.8 11 106-116 25-35 (90)
132 1wil_A KIAA1045 protein; ring 24.4 54 0.0019 23.5 2.8 24 106-129 15-39 (89)
133 2g45_A Ubiquitin carboxyl-term 24.3 35 0.0012 25.5 1.9 28 106-135 34-62 (129)
134 1x63_A Skeletal muscle LIM-pro 24.2 22 0.00076 23.1 0.7 27 107-133 44-70 (82)
135 2ecv_A Tripartite motif-contai 24.1 35 0.0012 21.7 1.7 26 106-132 19-44 (85)
136 2kfq_A FP1; protein, de novo p 24.0 18 0.00062 18.7 0.2 11 121-131 3-14 (32)
137 1ffk_W Ribosomal protein L37AE 23.9 28 0.00095 24.0 1.2 27 106-132 27-58 (73)
138 1wge_A Hypothetical protein 26 23.7 21 0.00072 25.1 0.5 12 119-130 29-40 (83)
139 2lvr_A Zinc finger and BTB dom 29.3 17 0.00058 17.8 0.0 13 120-132 3-16 (30)
140 1fv5_A First zinc finger of U- 23.6 24 0.00082 20.2 0.7 13 119-131 7-20 (36)
141 2d8y_A Eplin protein; LIM doma 23.5 21 0.00072 23.9 0.5 26 107-132 43-68 (91)
142 2yqq_A Zinc finger HIT domain- 23.2 50 0.0017 21.5 2.2 24 106-132 12-36 (56)
143 2ecy_A TNF receptor-associated 23.1 52 0.0018 20.3 2.3 26 106-132 15-40 (66)
144 2dmd_A Zinc finger protein 64, 22.9 55 0.0019 20.7 2.5 26 106-131 8-48 (96)
145 2ytb_A Zinc finger protein 32; 22.6 29 0.00098 18.7 0.9 11 120-130 11-22 (42)
146 2epc_A Zinc finger protein 32; 22.5 31 0.0011 18.5 1.0 11 120-130 11-22 (42)
147 2ea6_A Ring finger protein 4; 22.0 48 0.0016 20.3 1.9 26 106-131 15-46 (69)
148 3cxl_A N-chimerin; SH2, RHO-GA 21.9 36 0.0012 29.7 1.8 41 106-146 220-264 (463)
149 3l11_A E3 ubiquitin-protein li 21.7 34 0.0012 23.7 1.3 25 106-131 15-39 (115)
150 2ee8_A Protein ODD-skipped-rel 21.7 75 0.0026 20.6 3.0 26 106-131 17-57 (106)
151 2ct7_A Ring finger protein 31; 21.6 31 0.0011 23.4 1.1 18 119-136 42-60 (86)
152 2epv_A Zinc finger protein 268 21.6 33 0.0011 18.9 1.0 10 120-129 12-22 (44)
153 2yte_A Zinc finger protein 473 21.1 32 0.0011 18.5 0.9 9 121-129 11-20 (42)
154 2eon_A ZFP-95, zinc finger pro 21.0 37 0.0013 18.8 1.2 10 106-115 12-21 (46)
155 3mhs_A Ubiquitin carboxyl-term 21.0 17 0.00058 31.3 -0.5 31 106-136 48-79 (476)
156 1njq_A Superman protein; zinc- 20.9 33 0.0011 18.2 0.9 9 121-129 7-16 (39)
157 2epx_A Zinc finger protein 28 20.9 38 0.0013 18.6 1.2 9 106-114 12-20 (47)
158 2i50_A Ubiquitin carboxyl-term 20.7 32 0.0011 25.5 1.0 27 106-132 28-67 (126)
159 3iuf_A Zinc finger protein UBI 20.6 33 0.0011 19.7 0.9 12 120-131 7-19 (48)
160 1v5n_A PDI-like hypothetical p 20.4 45 0.0015 23.1 1.7 19 106-124 47-65 (89)
161 2djb_A Polycomb group ring fin 20.3 69 0.0024 20.1 2.5 25 106-131 15-40 (72)
162 2egq_A FHL1 protein; LIM domai 20.3 27 0.00093 22.3 0.5 27 107-133 47-73 (77)
163 2en2_A B-cell lymphoma 6 prote 20.3 33 0.0011 18.4 0.9 11 120-130 11-22 (42)
164 2el5_A Zinc finger protein 268 20.3 37 0.0013 18.2 1.0 11 120-130 10-21 (42)
165 2enf_A Zinc finger protein 347 20.1 36 0.0012 18.8 1.0 10 121-130 13-23 (46)
166 2eow_A Zinc finger protein 347 20.1 36 0.0012 18.7 0.9 11 120-130 12-23 (46)
167 2emi_A Zinc finger protein 484 20.0 42 0.0014 18.5 1.2 11 120-130 12-23 (46)
No 1
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.95 E-value=1.2e-29 Score=184.64 Aligned_cols=58 Identities=40% Similarity=0.992 Sum_probs=56.6
Q ss_pred cccccccccccccc-ceeeecCcccccCCCCCCCCCCcccchhhhHHHHHHhCCccccc
Q 042575 106 KRRCEICNKKVGLI-EFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRAD 163 (169)
Q Consensus 106 ~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~np~v~~~ 163 (169)
++||+.|+|||||+ +|+||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus 25 ~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~ 83 (85)
T 1wff_A 25 MKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS 83 (85)
T ss_dssp CCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred CccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence 79999999999995 99999999999999999999999999999999999999999986
No 2
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.92 E-value=1.3e-26 Score=160.74 Aligned_cols=49 Identities=51% Similarity=1.162 Sum_probs=47.7
Q ss_pred ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHHHH
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREMLV 154 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~ 154 (169)
++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus 15 ~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~ 63 (64)
T 1wfh_A 15 PNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63 (64)
T ss_dssp CCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred CCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999885
No 3
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.91 E-value=4e-26 Score=158.29 Aligned_cols=48 Identities=50% Similarity=1.229 Sum_probs=47.0
Q ss_pred ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHHH
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREML 153 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l 153 (169)
++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus 15 ~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~ 62 (64)
T 1wg2_A 15 NNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS 62 (64)
T ss_dssp SCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred CCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence 799999999999999999999999999999999999999999999887
No 4
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.90 E-value=6.6e-25 Score=155.92 Aligned_cols=47 Identities=51% Similarity=1.170 Sum_probs=45.6
Q ss_pred ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHH
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREM 152 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~ 152 (169)
++||+.|+|||||++|.||||++||+.|||+|+|+|+||||++||++
T Consensus 25 ~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~ 71 (74)
T 1wfl_A 25 KNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP 71 (74)
T ss_dssp TTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred CCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence 79999999999999999999999999999999999999999999874
No 5
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.89 E-value=6.6e-25 Score=155.94 Aligned_cols=48 Identities=54% Similarity=1.189 Sum_probs=46.8
Q ss_pred ccccccccccccccceeeecCcccccCCCCCCCCCCcccchhhhHHHH
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCGTHRYPKEHACTFDFKKFDREML 153 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l 153 (169)
++||+.|+|||+|++|+||||++||+.|||||+|+|+||||++||++|
T Consensus 25 ~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~ 72 (74)
T 1wfp_A 25 ATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS 72 (74)
T ss_dssp CCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred CccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence 899999999999999999999999999999999999999999999876
No 6
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=4.4e-25 Score=154.31 Aligned_cols=48 Identities=40% Similarity=0.866 Sum_probs=45.9
Q ss_pred ccccccccccccccc---eeeecCcccccCCCCCCCCCCcccchhhhHHHH
Q 042575 106 KRRCEICNKKVGLIE---FRCRCGHLYCGTHRYPKEHACTFDFKKFDREML 153 (169)
Q Consensus 106 ~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l 153 (169)
++||+.|+|||||++ |+||||++||+.|||||+|+|+||||++||+.|
T Consensus 15 ~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~ 65 (67)
T 1x4w_A 15 RRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS 65 (67)
T ss_dssp TTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred CCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence 899999999999984 999999999999999999999999999999865
No 7
>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A
Probab=99.67 E-value=2.1e-17 Score=113.77 Aligned_cols=36 Identities=36% Similarity=0.911 Sum_probs=32.0
Q ss_pred CcccccccCCCCCCcccCCCchhhhhhHHHHHHHHh
Q 042575 4 NNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAELIA 39 (169)
Q Consensus 4 ~~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~ 39 (169)
++|+||+|||||||||+|+||||||||++++++++.
T Consensus 11 ~~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~ 46 (62)
T 2kzy_A 11 PGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 46 (62)
T ss_dssp SCCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHH
T ss_pred CcccchhhCCCCcCChhhcCcCHHHHHHHHHhhhcc
Confidence 478899999999999999999999999998765543
No 8
>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B
Probab=99.64 E-value=6.9e-17 Score=114.37 Aligned_cols=35 Identities=31% Similarity=0.836 Sum_probs=27.3
Q ss_pred CCcccccccCCCCCCcccCCCchhhhhhHHHHHHH
Q 042575 3 RNNVTMCMKGCGFYGSKENKNMCSKCYDDYLKAEL 37 (169)
Q Consensus 3 ~~~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~ 37 (169)
+++|+||+|||||||||+|+||||||||+...+..
T Consensus 13 pe~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~~ 47 (74)
T 2c7n_A 13 DQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKAR 47 (74)
T ss_dssp -----CCTTCSSSCCCGGGTTCCHHHHHHHHHHHH
T ss_pred CCcchhHHhCCCCCCChhhcCccHHHHHHHHHHHH
Confidence 35788999999999999999999999999865443
No 9
>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C
Probab=99.58 E-value=5e-16 Score=102.01 Aligned_cols=30 Identities=33% Similarity=0.979 Sum_probs=27.5
Q ss_pred cccccc-cCCCCCCcccCCCchhhhhhHHHH
Q 042575 5 NVTMCM-KGCGFYGSKENKNMCSKCYDDYLK 34 (169)
Q Consensus 5 ~p~lC~-n~CGFfGs~at~n~CSkCyr~~~~ 34 (169)
+..||+ |||||||||+|+|||||||||++.
T Consensus 17 gq~lC~~ngCGFfG~p~t~n~CSkCyre~~e 47 (49)
T 3oj3_I 17 GTSKCRKAGCVYFGTPENKGFCTLCFIEYRE 47 (49)
T ss_dssp CCCBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred CccccccCCCCCccCcccCCcchHHHHHHHH
Confidence 347999 999999999999999999999875
No 10
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.27 E-value=1.1e-12 Score=95.29 Aligned_cols=55 Identities=20% Similarity=0.433 Sum_probs=46.4
Q ss_pred cccccc--ccccccccceeee-cCcccccCCCCCCCCCCcccchhhhHHHHHHhCCcccccccccCC
Q 042575 106 KRRCEI--CNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFKKFDREMLVKDNPLIRADKLEGRI 169 (169)
Q Consensus 106 ~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~np~v~~~Kl~~KI 169 (169)
++||.. |+++ +|++|.|+ |+.+||..|||+++|+|+.. .+.+.++...+.++. +|
T Consensus 25 ~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~-~~ 82 (86)
T 1wfe_A 25 SYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVR-SG 82 (86)
T ss_dssp CEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSS-CS
T ss_pred CCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHH-HH
Confidence 789999 9998 78999999 99999999999999999975 335667777666665 44
No 11
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.23 E-value=2.6e-12 Score=91.28 Aligned_cols=40 Identities=25% Similarity=0.801 Sum_probs=38.3
Q ss_pred cccccc--ccccccccceeee-cCcccccCCCCCCCCCCcccch
Q 042575 106 KRRCEI--CNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTFDFK 146 (169)
Q Consensus 106 ~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 146 (169)
.+||.. |+++ ++++|+|+ |+.+||..|||++.|+|+++++
T Consensus 14 g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~ 56 (75)
T 1wys_A 14 GQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNV 56 (75)
T ss_dssp CCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSS
T ss_pred CCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCcc
Confidence 689998 9998 89999999 9999999999999999999986
No 12
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=2.6e-12 Score=88.61 Aligned_cols=37 Identities=30% Similarity=0.928 Sum_probs=35.2
Q ss_pred cccccc--ccccccccceeee-cCcccccCCCCCCCCCCcc
Q 042575 106 KRRCEI--CNKKVGLIEFRCR-CGHLYCGTHRYPKEHACTF 143 (169)
Q Consensus 106 ~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f 143 (169)
.+||.. |+++ +|++|.|+ |+.+||..|||+|+|+|.-
T Consensus 12 ~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~ 51 (63)
T 1x4v_A 12 TNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG 51 (63)
T ss_dssp CCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred CCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence 789999 9998 89999999 9999999999999999973
No 13
>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=97.89 E-value=7.3e-06 Score=53.19 Aligned_cols=30 Identities=33% Similarity=0.973 Sum_probs=26.8
Q ss_pred Ccccccc-cCCCCCCcccCCCchhhhhhHHH
Q 042575 4 NNVTMCM-KGCGFYGSKENKNMCSKCYDDYL 33 (169)
Q Consensus 4 ~~p~lC~-n~CGFfGs~at~n~CSkCyr~~~ 33 (169)
.+...|. .||-|||+|.+.++|..||-++.
T Consensus 13 ~gt~kCRk~GC~fFGTpen~GFCTlCf~eyr 43 (48)
T 2eqe_A 13 TGTSKCRKAGCVYFGTPENKGFCTLCFIEYS 43 (48)
T ss_dssp CCSSBCSSTTCCSBCCTTTTTCCHHHHHHHH
T ss_pred cccchhhhcCCCcccCcccCceeeeehhhhh
Confidence 4556897 89999999999999999999985
No 14
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=93.20 E-value=0.055 Score=38.43 Aligned_cols=28 Identities=32% Similarity=0.931 Sum_probs=24.5
Q ss_pred ccccccccccccccc--eeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGLIE--FRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H 133 (169)
...|..|+++.+++. -.|| ||.+||+.+
T Consensus 9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 39 (88)
T 1wfk_A 9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC 39 (88)
T ss_dssp CSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred CCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence 568999999999864 7999 999999875
No 15
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=92.97 E-value=0.04 Score=37.59 Aligned_cols=29 Identities=41% Similarity=1.108 Sum_probs=24.6
Q ss_pred cccccccccccccc--ceeee-cCcccccCCC
Q 042575 106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTHR 134 (169)
Q Consensus 106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR 134 (169)
...|..|+++.+++ --.|| ||.+||+.+-
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs 42 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHS 42 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGS
T ss_pred CCcccCCCCccCCccccccCCCCCEEEccccc
Confidence 35899999999985 47999 9999999763
No 16
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=91.97 E-value=0.063 Score=37.34 Aligned_cols=28 Identities=36% Similarity=1.086 Sum_probs=24.1
Q ss_pred cccccccccccccc--ceeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 133 (169)
...|..|+++.+++ --.|| ||.+||+.+
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 49 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC 49 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence 46899999999985 47999 999999864
No 17
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=91.65 E-value=0.067 Score=40.16 Aligned_cols=28 Identities=29% Similarity=0.945 Sum_probs=24.0
Q ss_pred cccccccccccccc--ceeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 133 (169)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C 99 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC 99 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence 46899999999885 47999 999999864
No 18
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.16 E-value=0.097 Score=36.46 Aligned_cols=28 Identities=21% Similarity=0.737 Sum_probs=24.2
Q ss_pred ccccccccccccccc--eeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGLIE--FRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H 133 (169)
...|..|.++.+++. -.|| ||.+||+..
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 44 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC 44 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence 468999999998853 7999 999999875
No 19
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=90.67 E-value=0.1 Score=36.43 Aligned_cols=28 Identities=29% Similarity=0.739 Sum_probs=24.2
Q ss_pred cccccccccccccc--ceeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 133 (169)
...|..|+++.+++ --.|| ||.+||+.+
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 51 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDC 51 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred CCCCcCcCCccccchhcccccCCCcEEChHH
Confidence 56899999999985 47999 999999864
No 20
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=90.58 E-value=0.1 Score=41.90 Aligned_cols=28 Identities=32% Similarity=0.995 Sum_probs=24.3
Q ss_pred cccccccccccccc--ceeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 133 (169)
...|..|+++.+++ --.|| ||.+||+.+
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C 191 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC 191 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence 46999999999985 47999 999999964
No 21
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=89.83 E-value=0.13 Score=36.44 Aligned_cols=28 Identities=32% Similarity=0.943 Sum_probs=24.1
Q ss_pred cccccccccccccc--ceeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 133 (169)
...|..|+++.+++ -..|| ||.+||+..
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C 50 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC 50 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence 46899999999985 58999 999999864
No 22
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=89.27 E-value=0.15 Score=41.42 Aligned_cols=28 Identities=32% Similarity=1.124 Sum_probs=24.4
Q ss_pred cccccccccccccc--ceeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 133 (169)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C 194 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC 194 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence 56899999999985 58999 999999864
No 23
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=88.12 E-value=0.19 Score=37.86 Aligned_cols=41 Identities=17% Similarity=0.408 Sum_probs=28.2
Q ss_pred cccccccccccccc--ceeee-cCcccccCC---CCCCCCCCcccch
Q 042575 106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH---RYPKEHACTFDFK 146 (169)
Q Consensus 106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H---Ry~e~H~C~fDyk 146 (169)
...|..|+++.+++ --.|| ||.+||+.. +.+..--|..=|.
T Consensus 19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~ 65 (120)
T 1y02_A 19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 65 (120)
T ss_dssp -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence 46899999998885 47999 999998754 5555555665554
No 24
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=85.56 E-value=0.26 Score=32.75 Aligned_cols=23 Identities=26% Similarity=0.907 Sum_probs=19.5
Q ss_pred ccccccccccccc--cceeee-cCcc
Q 042575 106 KRRCEICNKKVGL--IEFRCR-CGHL 128 (169)
Q Consensus 106 ~~rC~~C~kkvgl--~gf~Cr-Cg~~ 128 (169)
+..|..|++++++ ++++|| |+.+
T Consensus 19 ~~~C~~Cg~~i~~gkq~~kC~dC~~~ 44 (61)
T 4b6d_A 19 PESCVPCGKRIKFGKLSLKCRDCRVV 44 (61)
T ss_dssp CEECTTTCCEECTTCEEEEESSSSCE
T ss_pred CcccccccCEEEEeeEeeECCCCCCe
Confidence 6799999999977 799999 8643
No 25
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=83.92 E-value=0.41 Score=40.90 Aligned_cols=40 Identities=18% Similarity=0.339 Sum_probs=27.1
Q ss_pred ccccccccccc-cc--cceeee-cCcccccCCCCCCCCCCcccch
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHLYCGTHRYPKEHACTFDFK 146 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 146 (169)
+..|..|++.+ |+ .|++|| ||.++|..-.-.=. .|.-+..
T Consensus 357 ~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~ 400 (406)
T 2vrw_B 357 TTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ 400 (406)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred CCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence 78999999988 66 799999 99999976432112 3876654
No 26
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=80.10 E-value=0.68 Score=34.07 Aligned_cols=30 Identities=33% Similarity=0.837 Sum_probs=23.7
Q ss_pred ccccccccccccccceeee-cCcccccCCCCCCCC
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLYCGTHRYPKEH 139 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H 139 (169)
..+|..|....++ +-|- ||+++|+ ||+..|
T Consensus 24 ~~~C~~C~~~~~~--W~CL~CG~vgCg--r~~~~H 54 (109)
T 3c5k_A 24 TQPCGDCGTIQEN--WVCLSCYQVYCG--RYINGH 54 (109)
T ss_dssp TCCCTTTCCCSSE--EEETTTCCEEEC--TTTTCH
T ss_pred CCcCccccCCCCe--eeeeecCccccC--CCcChH
Confidence 5689999988665 6688 9999998 555555
No 27
>2eqf_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=78.94 E-value=0.87 Score=28.95 Aligned_cols=24 Identities=17% Similarity=0.650 Sum_probs=21.4
Q ss_pred ccccCCCCCCcccCCCchhhhhhH
Q 042575 8 MCMKGCGFYGSKENKNMCSKCYDD 31 (169)
Q Consensus 8 lC~n~CGFfGs~at~n~CSkCyr~ 31 (169)
-++-+|.-|||.--+++|..||.-
T Consensus 12 C~apgCdhygN~kc~GyCNeC~~f 35 (46)
T 2eqf_A 12 CRAPACDHFGNAKCNGYCNECFQF 35 (46)
T ss_dssp CSSTTCCSCCBGGGTBSCHHHHHH
T ss_pred ccCcccccccchhhhhhhHHHHhh
Confidence 358899999999999999999964
No 28
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=78.89 E-value=0.4 Score=41.12 Aligned_cols=28 Identities=25% Similarity=0.693 Sum_probs=0.0
Q ss_pred cccccccccccccc--ceeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGLI--EFRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 133 (169)
...|..|+++.+++ ...|| ||.+||+.+
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~C 405 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNC 405 (434)
T ss_dssp -------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehhh
Confidence 56899999998885 58999 999998754
No 29
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=72.11 E-value=1.9 Score=26.43 Aligned_cols=23 Identities=30% Similarity=0.840 Sum_probs=18.8
Q ss_pred ccccccccccc-cc--cceeee-cCcc
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHL 128 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 128 (169)
+..|..|++.| || +|++|+ |+.+
T Consensus 11 pt~C~~C~~~l~g~~~qg~~C~~C~~~ 37 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQGLKCEDCGMN 37 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCcCCCCceeeccCCccCEeCCCCCe
Confidence 78999999987 44 799999 8755
No 30
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=70.70 E-value=4.2 Score=26.49 Aligned_cols=24 Identities=33% Similarity=0.793 Sum_probs=19.6
Q ss_pred ccccccccccc-cc--cceeee-cCccc
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHLY 129 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 129 (169)
+..|..|++.| || +|++|+ |+.+.
T Consensus 23 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~ 50 (65)
T 2enz_A 23 PTFCEHCGTLLWGLARQGLKCDACGMNV 50 (65)
T ss_dssp CCBCSSSCCBCCCSSSCSEEESSSCCEE
T ss_pred CcCchhcChhheecCCcccccCCCCCcc
Confidence 78999999987 44 799999 87664
No 31
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=70.02 E-value=1.6 Score=27.86 Aligned_cols=23 Identities=22% Similarity=0.843 Sum_probs=18.6
Q ss_pred ccccccccccccccceeee-cCccc
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLY 129 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~F 129 (169)
+..|..|+|.| ..|++|+ |++.+
T Consensus 14 ~t~C~~C~k~i-~~G~kC~~Ck~~c 37 (49)
T 1kbe_A 14 SQVCNVCQKSM-IFGVKCKHCRLKC 37 (49)
T ss_dssp SCCCSSSCCSS-CCEEEETTTTEEE
T ss_pred CcCccccCcee-ECcCCCCCCCCcc
Confidence 35799999988 4799999 87664
No 32
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.75 E-value=2.6 Score=28.93 Aligned_cols=24 Identities=33% Similarity=0.899 Sum_probs=20.0
Q ss_pred ccccccccccc-cc--cceeee-cCccc
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHLY 129 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 129 (169)
+..|..|++.| || +|++|+ |+.++
T Consensus 28 pt~C~~C~~~lwGl~kqg~~C~~C~~~~ 55 (83)
T 2yuu_A 28 PTFCSVCKDFVWGLNKQGYKCRQCNAAI 55 (83)
T ss_dssp CCCCSSSCCCCCSSSCCEEEETTTCCEE
T ss_pred CcChhhcChhhccccccccccCCcCCee
Confidence 78999999987 44 799999 87764
No 33
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=66.37 E-value=2 Score=26.53 Aligned_cols=23 Identities=39% Similarity=0.895 Sum_probs=19.5
Q ss_pred ccccccccccccccceeee-cCccc
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLY 129 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~F 129 (169)
+..|..|++.+- +|++|+ |+..+
T Consensus 14 pt~C~~C~~~l~-qG~~C~~C~~~~ 37 (52)
T 1faq_A 14 LAFCDICQKFLL-NGFRCQTCGYKF 37 (52)
T ss_dssp CEECTTSSSEEC-SEEECTTTTCCB
T ss_pred CcCCCCcccccc-cCCEeCCCCCeE
Confidence 689999999876 899999 87664
No 34
>2eqg_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=65.63 E-value=3.8 Score=26.25 Aligned_cols=26 Identities=23% Similarity=0.695 Sum_probs=21.9
Q ss_pred cc-ccCCCCCCcccCCCchhhhhhHHH
Q 042575 8 MC-MKGCGFYGSKENKNMCSKCYDDYL 33 (169)
Q Consensus 8 lC-~n~CGFfGs~at~n~CSkCyr~~~ 33 (169)
.| .-||-||=|-.|+-+|-.||...+
T Consensus 13 kCeTPnCpF~mSVnTQP~CHEC~errq 39 (49)
T 2eqg_A 13 KCETPNCPFFMSVNTQPLCHECSERRQ 39 (49)
T ss_dssp BCSSTTCCSBCCTTTTTSCHHHHHHHH
T ss_pred eecCCCCCeEEEecCccchHHHHHHHh
Confidence 35 458999999999999999997553
No 35
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=65.35 E-value=3.1 Score=29.31 Aligned_cols=23 Identities=30% Similarity=0.977 Sum_probs=18.8
Q ss_pred ccccccccccc----cccceeee-cCcc
Q 042575 106 KRRCEICNKKV----GLIEFRCR-CGHL 128 (169)
Q Consensus 106 ~~rC~~C~kkv----gl~gf~Cr-Cg~~ 128 (169)
..+|..|+|.+ +|+||+|. |+.+
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~ 65 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAM 65 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCE
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChh
Confidence 46999999985 56899999 8665
No 36
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=64.41 E-value=3 Score=28.18 Aligned_cols=24 Identities=25% Similarity=0.703 Sum_probs=20.6
Q ss_pred ccccccccccccccceeee-cCccc
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLY 129 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~F 129 (169)
+..|..|++.|.-+|++|+ ||.+.
T Consensus 35 pt~C~~C~~~l~~qG~kC~~C~~~c 59 (72)
T 2fnf_X 35 PGWCDLCGREVLRQALRCANCKFTC 59 (72)
T ss_dssp CCBCTTTSSBCSSCCEECTTSSCEE
T ss_pred CcchhhhhHHHHhCcCccCCCCCee
Confidence 7899999999966899999 87653
No 37
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=63.35 E-value=3.4 Score=26.87 Aligned_cols=23 Identities=30% Similarity=0.840 Sum_probs=18.8
Q ss_pred ccccccccccc-cc--cceeee-cCcc
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHL 128 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 128 (169)
+..|..|++.| || +|++|+ |+.+
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 46 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCEDCGMN 46 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCcccccChhhhccCceeeECCCCCCe
Confidence 78999999986 44 799999 8755
No 38
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=62.57 E-value=3.4 Score=30.58 Aligned_cols=26 Identities=19% Similarity=0.545 Sum_probs=17.3
Q ss_pred cccccceeee-cCcccccCCCCCCCCCCc
Q 042575 115 KVGLIEFRCR-CGHLYCGTHRYPKEHACT 142 (169)
Q Consensus 115 kvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~ 142 (169)
+|-+..++|+ ||++| .-+......|+
T Consensus 62 ~L~v~p~~C~~CG~~F--~~~~~kPsrCP 88 (105)
T 2gmg_A 62 VLLIKPAQCRKCGFVF--KAEINIPSRCP 88 (105)
T ss_dssp EEEECCCBBTTTCCBC--CCCSSCCSSCS
T ss_pred EEEEECcChhhCcCee--cccCCCCCCCc
Confidence 4556789999 99999 33444445554
No 39
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=61.92 E-value=2.7 Score=27.21 Aligned_cols=23 Identities=26% Similarity=0.741 Sum_probs=19.9
Q ss_pred ccccccccccccccceeee-cCcc
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHL 128 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~ 128 (169)
+..|..|++.|.-+|++|+ |+.+
T Consensus 22 pt~C~~C~~~i~kqg~kC~~C~~~ 45 (59)
T 1rfh_A 22 PGWCDLCGREVLRQALRCANCKFT 45 (59)
T ss_dssp CEECTTTCSEECSCCEECTTTSCE
T ss_pred CeEchhcchhhhhCccEeCCCCCe
Confidence 7899999999955899999 8765
No 40
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=60.08 E-value=3.6 Score=37.09 Aligned_cols=38 Identities=18% Similarity=0.406 Sum_probs=28.0
Q ss_pred ccccccccccc-cc--cceeee-cCcccccCCCCCCCCCCccc
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHLYCGTHRYPKEHACTFD 144 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fD 144 (169)
+..|..|++.+ || .|++|+ ||..+|....-.= ..|...
T Consensus 529 ~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v-~~C~~~ 570 (587)
T 3ky9_A 529 TTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV-PPCGRH 570 (587)
T ss_dssp CCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS-CCC---
T ss_pred CcccccccccccccccCCcCCCCCCCccchhhhhcC-CCCCCC
Confidence 78999999987 77 699999 9999987754432 367544
No 41
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=57.94 E-value=4.9 Score=27.10 Aligned_cols=25 Identities=32% Similarity=0.700 Sum_probs=20.1
Q ss_pred ccccccccccccc---cceeee-cCcccc
Q 042575 106 KRRCEICNKKVGL---IEFRCR-CGHLYC 130 (169)
Q Consensus 106 ~~rC~~C~kkvgl---~gf~Cr-Cg~~FC 130 (169)
..+|..|+..+.| ...+|+ ||+-.=
T Consensus 21 ~Y~C~~Cg~~~~l~~~~~iRC~~CG~RIL 49 (63)
T 3h0g_L 21 IYLCADCGARNTIQAKEVIRCRECGHRVM 49 (63)
T ss_dssp CCBCSSSCCBCCCCSSSCCCCSSSCCCCC
T ss_pred EEECCCCCCeeecCCCCceECCCCCcEEE
Confidence 7999999999998 368997 865443
No 42
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=57.86 E-value=3.3 Score=27.53 Aligned_cols=36 Identities=22% Similarity=0.603 Sum_probs=25.2
Q ss_pred cccccccccccccc-eeee-cCcccccC---CCCCCCCCCc
Q 042575 107 RRCEICNKKVGLIE-FRCR-CGHLYCGT---HRYPKEHACT 142 (169)
Q Consensus 107 ~rC~~C~kkvgl~g-f~Cr-Cg~~FC~~---HRy~e~H~C~ 142 (169)
..|+.|.+.+.-.+ |.|. |+..||.. --+-.-|+|.
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CP 56 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCP 56 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSS
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCc
Confidence 35999999985554 9998 99999852 2222456664
No 43
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.87 E-value=7.9 Score=26.60 Aligned_cols=42 Identities=19% Similarity=0.448 Sum_probs=29.8
Q ss_pred ccccccccccc-cc--cceeee-cCcccccCCCCCCCCCCcccchh
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHLYCGTHRYPKEHACTFDFKK 147 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~ 147 (169)
+..|..|++.| || +|++|+ |+..+=......=...|..++.+
T Consensus 28 pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~e 73 (85)
T 2eli_A 28 PTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHTE 73 (85)
T ss_dssp CCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCCC
T ss_pred CcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchhh
Confidence 78999999987 44 799999 88775333333334578887763
No 44
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=55.59 E-value=5.2 Score=26.15 Aligned_cols=23 Identities=30% Similarity=0.765 Sum_probs=19.0
Q ss_pred ccccccccccc-cc--cceeee-cCcc
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHL 128 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 128 (169)
+..|..|++.| || +|++|+ |+.+
T Consensus 24 pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 50 (66)
T 1y8f_A 24 PTYCYECEGLLWGIARQGMRCTECGVK 50 (66)
T ss_dssp CCCCTTTCCCCCSSCCEEEEETTTCCE
T ss_pred CcChhhcChhhcccCcceeEcCCCCCe
Confidence 78999999987 44 799999 8765
No 45
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=53.64 E-value=4.6 Score=27.35 Aligned_cols=24 Identities=33% Similarity=0.898 Sum_probs=19.7
Q ss_pred ccccccccccc-cc--cceeee-cCccc
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHLY 129 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 129 (169)
+..|..|++-| || +|++|+ |+...
T Consensus 34 pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 61 (77)
T 2enn_A 34 PTFCSVCHEFVWGLNKQGYQCRQCNAAI 61 (77)
T ss_dssp CEECSSSCCEECCTTCCEEECSSSCCEE
T ss_pred CcCccccChhhccccccccCcCCCCCcC
Confidence 78999999987 44 799999 87654
No 46
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=53.47 E-value=4.6 Score=25.78 Aligned_cols=26 Identities=23% Similarity=0.513 Sum_probs=19.4
Q ss_pred ccccccccccccc--------------cceeee-cCccccc
Q 042575 106 KRRCEICNKKVGL--------------IEFRCR-CGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 131 (169)
+..|..|+|.... ..|.|. ||..|-.
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~ 44 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRD 44 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESS
T ss_pred CccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCC
Confidence 6789999887432 468998 8888854
No 47
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=51.61 E-value=11 Score=25.11 Aligned_cols=29 Identities=28% Similarity=0.509 Sum_probs=18.2
Q ss_pred cccccccccccccceee--ecCcccccCCCC
Q 042575 107 RRCEICNKKVGLIEFRC--RCGHLYCGTHRY 135 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~C--rCg~~FC~~HRy 135 (169)
-+|..|++.|....|.. +=|..||..|..
T Consensus 43 F~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~ 73 (82)
T 2co8_A 43 FRCHTCEATLWPGGYEQHPGDGHFYCLQHLP 73 (82)
T ss_dssp CBCSSSCCBCCTTSEECCTTTCCCEETTTCC
T ss_pred CEEcCCCCCcCCCceeEeCcCCEEEChHHHH
Confidence 46667777666655553 456777776654
No 48
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.15 E-value=4.1 Score=27.37 Aligned_cols=24 Identities=21% Similarity=0.721 Sum_probs=19.3
Q ss_pred ccccccccccc-cc--cceeee-cCccc
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHLY 129 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 129 (169)
+..|..|++.| || +|++|+ |+..+
T Consensus 28 pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 55 (74)
T 2db6_A 28 PKFCDVCARMIVLNNKFGLRCKNCKTNI 55 (74)
T ss_dssp CEECSSSCCEECHHHHEEEEESSSCCEE
T ss_pred CcCchhcChhhccccCCccccCCCCCcc
Confidence 78999999986 33 799999 87653
No 49
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=49.87 E-value=11 Score=23.49 Aligned_cols=26 Identities=23% Similarity=0.770 Sum_probs=18.7
Q ss_pred ccccccccccccc--------------cceeee-cCccccc
Q 042575 106 KRRCEICNKKVGL--------------IEFRCR-CGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 131 (169)
+..|..|+|.... ..|+|. ||..|-.
T Consensus 17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~ 57 (74)
T 2lce_A 17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNR 57 (74)
T ss_dssp SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESC
T ss_pred CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCC
Confidence 7899999987532 347888 7777754
No 50
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=48.96 E-value=4.9 Score=26.57 Aligned_cols=13 Identities=38% Similarity=0.669 Sum_probs=11.1
Q ss_pred ccccccccccccc
Q 042575 106 KRRCEICNKKVGL 118 (169)
Q Consensus 106 ~~rC~~C~kkvgl 118 (169)
|-||++|+|-+|-
T Consensus 3 PVRCFTCGkvi~~ 15 (55)
T 1ef4_A 3 PVRCLSCGKPVSA 15 (55)
T ss_dssp SSSCSCTTSCCHH
T ss_pred CeecCCCCCChhH
Confidence 6799999998764
No 51
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=47.73 E-value=6.1 Score=27.28 Aligned_cols=13 Identities=46% Similarity=0.700 Sum_probs=11.4
Q ss_pred ccccccccccccc
Q 042575 106 KRRCEICNKKVGL 118 (169)
Q Consensus 106 ~~rC~~C~kkvgl 118 (169)
|-||++|+|-+|-
T Consensus 4 PVRCFTCGkvi~~ 16 (70)
T 1twf_J 4 PVRCFSCGKVVGD 16 (70)
T ss_dssp CSBCTTTCCBCTT
T ss_pred CeecCCCCCChHH
Confidence 6899999998875
No 52
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=46.40 E-value=6.5 Score=25.45 Aligned_cols=23 Identities=30% Similarity=0.547 Sum_probs=20.4
Q ss_pred ccccccccccccccceeee-cCcc
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHL 128 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~ 128 (169)
...|..|+.+++.-.-+|| ||++
T Consensus 14 k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 14 KYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp EEECTTTCCEECTTCSSCSSSSSC
T ss_pred CccCCCCCCcCCCCceecCCCCCc
Confidence 6789999999888788999 9987
No 53
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=43.42 E-value=12 Score=27.31 Aligned_cols=28 Identities=25% Similarity=0.678 Sum_probs=22.4
Q ss_pred ccccccccccccccceeee-cCcccccCCCCC
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLYCGTHRYP 136 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~ 136 (169)
.-+|..|+|... |.|. |...||..|...
T Consensus 58 ~c~C~~C~k~~~---~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 58 WHQCDECSSAAV---SFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp GGBCTTTCSBCC---EECSSSSCEECTTTCTT
T ss_pred CCCCCcCCCCCC---cCcCCCCcchhhhccCC
Confidence 356888888754 8999 999999999743
No 54
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=42.41 E-value=13 Score=21.59 Aligned_cols=11 Identities=18% Similarity=0.863 Sum_probs=6.9
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 29 ~~~C~~C~~~f~ 40 (57)
T 1bbo_A 29 PYHCTYCNFSFK 40 (57)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCCCchhc
Confidence 46776 666663
No 55
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=41.62 E-value=9.2 Score=23.50 Aligned_cols=25 Identities=24% Similarity=0.572 Sum_probs=17.8
Q ss_pred ccccccccccc-----------cccceeee-cCcccc
Q 042575 106 KRRCEICNKKV-----------GLIEFRCR-CGHLYC 130 (169)
Q Consensus 106 ~~rC~~C~kkv-----------gl~gf~Cr-Cg~~FC 130 (169)
+..|..|+|.. |-..|+|. ||..|-
T Consensus 14 ~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVE 50 (62)
T ss_dssp EEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCE
T ss_pred CccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccc
Confidence 67899998852 22468887 888774
No 56
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=41.54 E-value=11 Score=26.67 Aligned_cols=27 Identities=30% Similarity=0.997 Sum_probs=21.0
Q ss_pred ccccccccccccc----cc-eeee-cCcccccCC
Q 042575 106 KRRCEICNKKVGL----IE-FRCR-CGHLYCGTH 133 (169)
Q Consensus 106 ~~rC~~C~kkvgl----~g-f~Cr-Cg~~FC~~H 133 (169)
+..|..|+|. .+ +| .+|+ ||.+|=+-=
T Consensus 35 ky~CpfCGk~-~vkR~a~GIW~C~kCg~~~AGGA 67 (83)
T 3j21_i 35 KHTCPVCGRK-AVKRISTGIWQCQKCGATFAGGA 67 (83)
T ss_dssp CBCCSSSCSS-CEEEEETTEEEETTTCCEEECCS
T ss_pred ccCCCCCCCc-eeEecCcCeEEcCCCCCEEeCCc
Confidence 7899999976 33 34 5999 999997753
No 57
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=41.36 E-value=16 Score=24.72 Aligned_cols=26 Identities=19% Similarity=0.650 Sum_probs=19.0
Q ss_pred ccccccccccccc--------------cceeee-cCccccc
Q 042575 106 KRRCEICNKKVGL--------------IEFRCR-CGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 131 (169)
...|..|+|.... ..|.|. ||..|-.
T Consensus 28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~ 68 (85)
T 2lv2_A 28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYS 68 (85)
T ss_dssp TEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESS
T ss_pred CEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCC
Confidence 6789999987332 368998 8888753
No 58
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=40.85 E-value=12 Score=27.00 Aligned_cols=28 Identities=32% Similarity=0.825 Sum_probs=21.6
Q ss_pred ccccccccccccc----cc-eeee-cCcccccCCC
Q 042575 106 KRRCEICNKKVGL----IE-FRCR-CGHLYCGTHR 134 (169)
Q Consensus 106 ~~rC~~C~kkvgl----~g-f~Cr-Cg~~FC~~HR 134 (169)
+..|..|+|. .+ +| .+|+ ||.+|=+-=-
T Consensus 36 ky~CpfCgk~-~vkR~a~GIW~C~~Cg~~~AGGAy 69 (92)
T 3iz5_m 36 KYFCEFCGKF-AVKRKAVGIWGCKDCGKVKAGGAY 69 (92)
T ss_dssp CBCCTTTCSS-CBEEEETTEEECSSSCCEEECCSS
T ss_pred cccCcccCCC-eeEecCcceEEcCCCCCEEeCCcc
Confidence 7899999976 34 35 5999 9999977543
No 59
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=40.59 E-value=14 Score=26.16 Aligned_cols=31 Identities=26% Similarity=0.641 Sum_probs=21.6
Q ss_pred ccccccccccccccceeee---cCcccccCCCCCCCC
Q 042575 106 KRRCEICNKKVGLIEFRCR---CGHLYCGTHRYPKEH 139 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr---Cg~~FC~~HRy~e~H 139 (169)
..+|..|.+. +-.-+.|- ||+++|++ |+..|
T Consensus 25 ~~~C~~C~~~-~~~lw~CL~~~Cg~vgCgr--~~~~H 58 (97)
T 2uzg_A 25 LGTCQDCKVQ-GPNLWACLENRCSYVGCGE--SQVDH 58 (97)
T ss_dssp TTCCSSSCCC-CSSCEEECCTTCCCEECCT--TTTCH
T ss_pred CCcCcCcCCC-CCCceeeecccCCCcccCC--CcChH
Confidence 4689999853 22236887 99999997 44433
No 60
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=39.84 E-value=11 Score=24.53 Aligned_cols=29 Identities=21% Similarity=0.595 Sum_probs=23.7
Q ss_pred cccccccccccccc----ceeee---cCcccccCCC
Q 042575 106 KRRCEICNKKVGLI----EFRCR---CGHLYCGTHR 134 (169)
Q Consensus 106 ~~rC~~C~kkvgl~----gf~Cr---Cg~~FC~~HR 134 (169)
..+|..|+..|.+. -+.|+ |+..||..=.
T Consensus 6 ~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~ 41 (60)
T 1wd2_A 6 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCL 41 (60)
T ss_dssp CCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSC
T ss_pred ceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcC
Confidence 56899999888884 47998 9999998654
No 61
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=39.42 E-value=8.1 Score=24.31 Aligned_cols=27 Identities=22% Similarity=0.296 Sum_probs=15.7
Q ss_pred cccccccccccccceeeecCcccccCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTH 133 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 133 (169)
-+|..|++.|....|.=+=|..||..|
T Consensus 40 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 66 (72)
T 3f6q_B 40 FVCAQCFQQFPEGLFYEFEGRKYCEHD 66 (72)
T ss_dssp SSCTTTCCCCGGGCCEEETTEEECHHH
T ss_pred CcccCCCCCCCCCCeEeECCeEeCHHH
Confidence 456667776655555555566666544
No 62
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=39.08 E-value=8.7 Score=26.23 Aligned_cols=13 Identities=23% Similarity=0.468 Sum_probs=10.8
Q ss_pred ccccccccccccc
Q 042575 106 KRRCEICNKKVGL 118 (169)
Q Consensus 106 ~~rC~~C~kkvgl 118 (169)
|-||++|+|-+|-
T Consensus 4 PVRCFTCGkvi~~ 16 (66)
T 4ayb_N 4 PIRCFTCGSLIAD 16 (66)
T ss_dssp CSBCTTTCCBCHH
T ss_pred CcccCCCcHhHHH
Confidence 6799999998764
No 63
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.77 E-value=16 Score=23.64 Aligned_cols=29 Identities=14% Similarity=0.292 Sum_probs=22.5
Q ss_pred cccccccccccccceeeecCcccccCCCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTHRY 135 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~HRy 135 (169)
-+|..|++.|....|.=+=|..||..|-.
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~cy~ 64 (76)
T 1x68_A 36 FNCGKCSVSLVGKGFLTQNKEIFCQKCGS 64 (76)
T ss_dssp CBCTTTCCBCSSSCEEEETTEEEETTTTC
T ss_pred CChhhCCCcCCCCceEeECCEEECHHHhh
Confidence 57888888887667777788889987753
No 64
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.51 E-value=12 Score=19.58 Aligned_cols=11 Identities=27% Similarity=0.718 Sum_probs=5.8
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|+|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elq_A 9 PFKCSLCEYATR 20 (36)
T ss_dssp SEECSSSSCEES
T ss_pred CccCCCCCchhC
Confidence 45555 555553
No 65
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=38.23 E-value=13 Score=26.76 Aligned_cols=20 Identities=40% Similarity=0.878 Sum_probs=17.4
Q ss_pred ceeeecCcccccCCCCCCCC
Q 042575 120 EFRCRCGHLYCGTHRYPKEH 139 (169)
Q Consensus 120 gf~CrCg~~FC~~HRy~e~H 139 (169)
=|+|.|++..=..+|||..|
T Consensus 48 FFkC~C~~Rt~sl~r~P~~~ 67 (92)
T 2kwq_A 48 FFKCPCGNRTISLDRLPKKH 67 (92)
T ss_dssp EEECTTSCEEEESSSSCCSC
T ss_pred EEECCCCCceeEeeeCCCCC
Confidence 58999999999999999854
No 66
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=38.15 E-value=23 Score=21.83 Aligned_cols=25 Identities=24% Similarity=0.716 Sum_probs=16.6
Q ss_pred ccccccccccccc--------------cceeee-cCcccc
Q 042575 106 KRRCEICNKKVGL--------------IEFRCR-CGHLYC 130 (169)
Q Consensus 106 ~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC 130 (169)
+..|..|++.... ..|+|. |+..|-
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~ 53 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFS 53 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEES
T ss_pred CccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccC
Confidence 6788888876422 357777 666654
No 67
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.36 E-value=20 Score=21.86 Aligned_cols=11 Identities=18% Similarity=0.664 Sum_probs=8.5
Q ss_pred ccccccccccc
Q 042575 106 KRRCEICNKKV 116 (169)
Q Consensus 106 ~~rC~~C~kkv 116 (169)
+..|..|++..
T Consensus 9 ~~~C~~C~k~f 19 (70)
T 1x5w_A 9 PEKCSECSYSC 19 (70)
T ss_dssp SEECSSSSCEE
T ss_pred CeECCCCCccc
Confidence 67888888763
No 68
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=36.10 E-value=17 Score=21.33 Aligned_cols=11 Identities=18% Similarity=0.911 Sum_probs=6.7
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 30 ~~~C~~C~~~f~ 41 (60)
T 2adr_A 30 PYPCGLCNRAFT 41 (60)
T ss_dssp SEECTTTCCEES
T ss_pred CccCCCCCCccC
Confidence 46776 666553
No 69
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.50 E-value=11 Score=23.99 Aligned_cols=27 Identities=26% Similarity=0.609 Sum_probs=17.5
Q ss_pred cccccccccccccceeeecCcccccCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTH 133 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 133 (169)
-+|..|++.|....|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~f~~~~g~~yC~~c 58 (70)
T 2d8x_A 32 FRCDLCQEVLADIGFVKNAGRHLCRPC 58 (70)
T ss_dssp SBCSSSCCBCSSSCCEEETTEEECHHH
T ss_pred CEeCCCCCcCCCCccEeECCeEECHHH
Confidence 467777777766556556666666554
No 70
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=35.44 E-value=11 Score=25.01 Aligned_cols=23 Identities=26% Similarity=0.652 Sum_probs=19.8
Q ss_pred ccccccccccccccceeee-cCcc
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHL 128 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~ 128 (169)
..-|..|.-++....-.|| ||+.
T Consensus 19 k~ICrkC~ARnp~~A~~CRKCg~~ 42 (56)
T 2ayj_A 19 KKVCRKCGALNPIRATKCRRCHST 42 (56)
T ss_dssp CEEETTTCCEECTTCSSCTTTCCC
T ss_pred hhhhccccCcCCcccccccCCCCC
Confidence 6789999999999999999 8743
No 71
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=35.06 E-value=23 Score=20.72 Aligned_cols=25 Identities=16% Similarity=0.256 Sum_probs=15.6
Q ss_pred cccccccccccc---------------ccceeee-cCcccc
Q 042575 106 KRRCEICNKKVG---------------LIEFRCR-CGHLYC 130 (169)
Q Consensus 106 ~~rC~~C~kkvg---------------l~gf~Cr-Cg~~FC 130 (169)
+..|..|+|... ...|+|. ||..|-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~ 52 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred CeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence 678888876532 1246776 776664
No 72
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=34.73 E-value=11 Score=18.10 Aligned_cols=11 Identities=18% Similarity=0.963 Sum_probs=6.0
Q ss_pred eeee-cCccccc
Q 042575 121 FRCR-CGHLYCG 131 (169)
Q Consensus 121 f~Cr-Cg~~FC~ 131 (169)
|+|. ||..|-.
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 4555 6665543
No 73
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.68 E-value=28 Score=22.03 Aligned_cols=47 Identities=17% Similarity=0.373 Sum_probs=30.7
Q ss_pred ccccccccccccccceeeecCcccccCC---CCCCCCCCcccchhhhHHHH
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCGTH---RYPKEHACTFDFKKFDREML 153 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~H---Ry~e~H~C~fDyk~~gr~~l 153 (169)
...|..|...+.. ...-.||++||..= .+.....|.+--+...++.|
T Consensus 15 ~~~C~IC~~~~~~-~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 15 VPECAICLQTCVH-PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp CCBCSSSSSBCSS-EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHH
T ss_pred CCCCccCCcccCC-CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhc
Confidence 5689999876543 34447999998632 23344678777666666655
No 74
>1e0f_I Haemadin, factor IIA; coagulation//heparin-B, coagulation/crystal structure/heparin-binding site/ hirudin/thrombin inhibitor; 3.1A {Haemadipsa sylvestris} SCOP: g.3.15.2
Probab=34.56 E-value=21 Score=23.14 Aligned_cols=30 Identities=27% Similarity=0.578 Sum_probs=23.9
Q ss_pred cccceeeecCcccccCCCCCCCCCCcccch
Q 042575 117 GLIEFRCRCGHLYCGTHRYPKEHACTFDFK 146 (169)
Q Consensus 117 gl~gf~CrCg~~FC~~HRy~e~H~C~fDyk 146 (169)
|-.||.|.||...|-.-.--....|+-|-|
T Consensus 13 gevgytcdcgekiclygqscndgqcsgdpk 42 (57)
T 1e0f_I 13 GEVGYTCDCGEKICLYGQSCNDGQCSGDPK 42 (57)
T ss_dssp SSCSSCEECSSSEECTTCCBSSSCBCSCCC
T ss_pred CceeeeccCCceeeEecccccCCcccCCCC
Confidence 446899999999998777777788887755
No 75
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=34.49 E-value=19 Score=20.76 Aligned_cols=25 Identities=24% Similarity=0.636 Sum_probs=15.3
Q ss_pred ccccccccccccc--------------cceeee-cCcccc
Q 042575 106 KRRCEICNKKVGL--------------IEFRCR-CGHLYC 130 (169)
Q Consensus 106 ~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC 130 (169)
+..|..|++.... ..|.|. ||..|-
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 43 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAA 43 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhC
Confidence 5678888776432 357777 766653
No 76
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.74 E-value=17 Score=25.27 Aligned_cols=30 Identities=37% Similarity=0.872 Sum_probs=25.3
Q ss_pred ccccccccccccc---cceeee-cCcccccCCCC
Q 042575 106 KRRCEICNKKVGL---IEFRCR-CGHLYCGTHRY 135 (169)
Q Consensus 106 ~~rC~~C~kkvgl---~gf~Cr-Cg~~FC~~HRy 135 (169)
..+|..|.+.+|+ +|..|+ |-+..|..-|-
T Consensus 25 ~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv 58 (76)
T 2csz_A 25 DRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRI 58 (76)
T ss_dssp CCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEE
T ss_pred ccchhhhCccccccccCCCcCcccChhhcccccc
Confidence 6899999999999 578999 98888876653
No 77
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=33.45 E-value=12 Score=18.15 Aligned_cols=11 Identities=27% Similarity=1.183 Sum_probs=6.5
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 3 ~~~C~~C~~~f~ 14 (30)
T 2m0d_A 3 PYQCDYCGRSFS 14 (30)
T ss_dssp CEECTTTCCEES
T ss_pred CccCCCCCcccC
Confidence 35666 666664
No 78
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=33.15 E-value=13 Score=18.13 Aligned_cols=12 Identities=25% Similarity=0.916 Sum_probs=7.2
Q ss_pred ceeee-cCccccc
Q 042575 120 EFRCR-CGHLYCG 131 (169)
Q Consensus 120 gf~Cr-Cg~~FC~ 131 (169)
.|.|. ||..|-.
T Consensus 3 ~~~C~~C~k~f~~ 15 (28)
T 2kvf_A 3 PYSCSVCGKRFSL 15 (28)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCCCcccCC
Confidence 36666 6666643
No 79
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=33.03 E-value=14 Score=27.79 Aligned_cols=30 Identities=20% Similarity=0.565 Sum_probs=22.1
Q ss_pred ccccccccc----cccccceeee-cCcccccCCCC
Q 042575 106 KRRCEICNK----KVGLIEFRCR-CGHLYCGTHRY 135 (169)
Q Consensus 106 ~~rC~~C~k----kvgl~gf~Cr-Cg~~FC~~HRy 135 (169)
+..|..|++ +++.--.+|+ ||++|-+-=-.
T Consensus 60 kytCPfCGk~~vKR~avGIW~C~~Cgk~fAGGAy~ 94 (116)
T 3cc2_Z 60 DHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYK 94 (116)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEECCSSS
T ss_pred CCcCCCCCCceeEecCceeEECCCCCCEEECCCcc
Confidence 789999998 2332237999 99999886433
No 80
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.99 E-value=17 Score=22.43 Aligned_cols=25 Identities=28% Similarity=0.650 Sum_probs=18.5
Q ss_pred ccccccccccccccceeeecCccccc
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 131 (169)
...|..|...+.- ...-.||++||.
T Consensus 20 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 44 (63)
T 2ysj_A 20 EVICPICLDILQK-PVTIDCGHNFCL 44 (63)
T ss_dssp CCBCTTTCSBCSS-CEECTTSSEECH
T ss_pred CCCCCcCCchhCC-eEEeCCCCcchH
Confidence 5689999876543 344489999996
No 81
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=32.83 E-value=12 Score=18.21 Aligned_cols=10 Identities=30% Similarity=1.075 Sum_probs=5.7
Q ss_pred eeee-cCcccc
Q 042575 121 FRCR-CGHLYC 130 (169)
Q Consensus 121 f~Cr-Cg~~FC 130 (169)
|.|. ||..|-
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 1ard_A 3 FVCEVCTRAFA 13 (29)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCcccC
Confidence 5565 666553
No 82
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=32.61 E-value=13 Score=18.09 Aligned_cols=11 Identities=27% Similarity=0.679 Sum_probs=6.1
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvh_A 3 PFSCSLCPQRSR 14 (27)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCcChhhC
Confidence 35565 666553
No 83
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.03 E-value=9.8 Score=18.41 Aligned_cols=12 Identities=25% Similarity=1.029 Sum_probs=7.6
Q ss_pred eeee-cCcccccC
Q 042575 121 FRCR-CGHLYCGT 132 (169)
Q Consensus 121 f~Cr-Cg~~FC~~ 132 (169)
|.|. ||..|-..
T Consensus 3 ~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 3 YVCERCGKRFVQS 15 (26)
Confidence 5666 77767543
No 84
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=31.66 E-value=14 Score=17.92 Aligned_cols=10 Identities=40% Similarity=1.418 Sum_probs=6.1
Q ss_pred eeee-cCcccc
Q 042575 121 FRCR-CGHLYC 130 (169)
Q Consensus 121 f~Cr-Cg~~FC 130 (169)
|.|. ||..|-
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2m0f_A 3 LKCRECGKQFT 13 (29)
T ss_dssp EECTTTSCEES
T ss_pred ccCCCCCCccC
Confidence 5666 666664
No 85
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=31.46 E-value=12 Score=26.21 Aligned_cols=40 Identities=23% Similarity=0.458 Sum_probs=25.5
Q ss_pred cccccccccccc-c--c--ceeee-cCcccccCCCC---CCCCCCcccc
Q 042575 106 KRRCEICNKKVG-L--I--EFRCR-CGHLYCGTHRY---PKEHACTFDF 145 (169)
Q Consensus 106 ~~rC~~C~kkvg-l--~--gf~Cr-Cg~~FC~~HRy---~e~H~C~fDy 145 (169)
+..|..|++.|= | . ||+|+ |+.+.=.++.. .=-..|..+|
T Consensus 35 PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~~ 83 (84)
T 2row_A 35 PTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVYY 83 (84)
T ss_dssp CEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTTT
T ss_pred CcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCcCC
Confidence 789999999864 3 4 99999 87665333333 2334555444
No 86
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=31.41 E-value=20 Score=27.64 Aligned_cols=29 Identities=21% Similarity=0.569 Sum_probs=24.9
Q ss_pred ccccccccccccc---cceeee-cCcccccCCC
Q 042575 106 KRRCEICNKKVGL---IEFRCR-CGHLYCGTHR 134 (169)
Q Consensus 106 ~~rC~~C~kkvgl---~gf~Cr-Cg~~FC~~HR 134 (169)
...|..|.+.+|+ .|..|. |...+|..=+
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~ 100 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS 100 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE
T ss_pred CccchhhcCccccccCCCCcCCCCCchhhcccc
Confidence 6899999999998 478999 9999998555
No 87
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.27 E-value=17 Score=18.64 Aligned_cols=10 Identities=20% Similarity=0.796 Sum_probs=5.2
Q ss_pred ceeee-cCccc
Q 042575 120 EFRCR-CGHLY 129 (169)
Q Consensus 120 gf~Cr-Cg~~F 129 (169)
.|.|. ||..|
T Consensus 7 ~~~C~~C~k~f 17 (35)
T 2elx_A 7 GYVCALCLKKF 17 (35)
T ss_dssp SEECSSSCCEE
T ss_pred CeECCCCcchh
Confidence 45555 55545
No 88
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=30.94 E-value=17 Score=18.76 Aligned_cols=11 Identities=36% Similarity=0.939 Sum_probs=5.6
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 1srk_A 7 PFVCRICLSAFT 18 (35)
T ss_dssp CEECSSSCCEES
T ss_pred CeeCCCCCcccC
Confidence 45555 555553
No 89
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.94 E-value=13 Score=24.72 Aligned_cols=26 Identities=19% Similarity=0.574 Sum_probs=17.9
Q ss_pred cccccccccccc-c---------------cceeee-cCccccc
Q 042575 106 KRRCEICNKKVG-L---------------IEFRCR-CGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvg-l---------------~gf~Cr-Cg~~FC~ 131 (169)
+..|..|+|... . ..|.|. ||..|-.
T Consensus 24 ~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~ 66 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKS 66 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSC
T ss_pred CcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCC
Confidence 678999988766 1 137787 7766643
No 90
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=30.92 E-value=17 Score=24.40 Aligned_cols=26 Identities=27% Similarity=0.770 Sum_probs=19.4
Q ss_pred ccccccccccccc---cceeeecCccccc
Q 042575 106 KRRCEICNKKVGL---IEFRCRCGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl---~gf~CrCg~~FC~ 131 (169)
...|..|--.+.+ .-+.|.||+.||.
T Consensus 11 ~~~CpICle~~~~~d~~~~p~~CGH~fC~ 39 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPCTCGYQICR 39 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSSTTSCCCCH
T ss_pred CCcCCccCccCccccccccccCCCCCcCH
Confidence 4579999887754 2355889999995
No 91
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=30.67 E-value=13 Score=18.27 Aligned_cols=11 Identities=27% Similarity=0.655 Sum_probs=6.3
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|+|. ||..|-
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvg_A 3 PYRCPLCRAGCP 14 (27)
T ss_dssp TEEETTTTEEES
T ss_pred CcCCCCCCcccC
Confidence 35666 666553
No 92
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.42 E-value=16 Score=23.23 Aligned_cols=26 Identities=19% Similarity=0.388 Sum_probs=13.4
Q ss_pred cccccccccccccceeeecCcccccC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGT 132 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 132 (169)
-+|..|++.|....|.=+=|..||..
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~ 59 (72)
T 1x61_A 34 FVCSTCRAQLRGQHFYAVERRAYCEG 59 (72)
T ss_dssp CBCSSSCCBCTTSCEEESSSCEEEHH
T ss_pred CcccccCCcCCcCcCEeeCCeEECHH
Confidence 45566666654444544444455443
No 93
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=30.41 E-value=14 Score=24.78 Aligned_cols=11 Identities=18% Similarity=0.655 Sum_probs=5.9
Q ss_pred ccccccccccc
Q 042575 106 KRRCEICNKKV 116 (169)
Q Consensus 106 ~~rC~~C~kkv 116 (169)
..+|..|++.|
T Consensus 25 ~~~C~~C~~~I 35 (89)
T 1x64_A 25 MPLCDKCGSGI 35 (89)
T ss_dssp CCBCTTTCCBC
T ss_pred CCCcccCCCEe
Confidence 34566665554
No 94
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=30.41 E-value=13 Score=18.03 Aligned_cols=10 Identities=20% Similarity=0.886 Sum_probs=5.6
Q ss_pred eeee-cCcccc
Q 042575 121 FRCR-CGHLYC 130 (169)
Q Consensus 121 f~Cr-Cg~~FC 130 (169)
|.|. ||..|-
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1klr_A 3 YQCQYCEFRSA 13 (30)
T ss_dssp CCCSSSSCCCS
T ss_pred ccCCCCCCccC
Confidence 5555 655554
No 95
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=30.34 E-value=14 Score=23.05 Aligned_cols=27 Identities=33% Similarity=0.448 Sum_probs=16.9
Q ss_pred cccccccccccccceeeecCcccccCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTH 133 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 133 (169)
-+|..|++.|....|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 58 (66)
T 1nyp_A 32 FVCAKCEKPFLGHRHYERKGLAYCETH 58 (66)
T ss_dssp CBCTTTCCBCSSSCCEEETTEEECHHH
T ss_pred CEECCCCCCCCCCceEeECCcEECHHH
Confidence 467777777665556555566666544
No 96
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.17 E-value=15 Score=23.33 Aligned_cols=27 Identities=15% Similarity=0.290 Sum_probs=18.2
Q ss_pred cccccccccccccceeeecCcccccCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTH 133 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 133 (169)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~c 62 (72)
T 1x4l_A 36 FNCKKCSLSLVGRGFLTERDDILCPDC 62 (72)
T ss_dssp CBCSSSCCBCTTSCCEECSSSEECHHH
T ss_pred CEeccCCCcCCCCccEeECCEEEChhH
Confidence 467778887765566666667776544
No 97
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.00 E-value=18 Score=24.49 Aligned_cols=11 Identities=18% Similarity=0.459 Sum_probs=8.4
Q ss_pred ccccccccccc
Q 042575 106 KRRCEICNKKV 116 (169)
Q Consensus 106 ~~rC~~C~kkv 116 (169)
+..|..|+|..
T Consensus 34 ~~~C~~C~k~F 44 (96)
T 2ctd_A 34 SVSCPTCQAVG 44 (96)
T ss_dssp CEECTTTCSCE
T ss_pred CcCCCCCCCCc
Confidence 56788888776
No 98
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=29.78 E-value=23 Score=26.63 Aligned_cols=29 Identities=24% Similarity=0.749 Sum_probs=24.2
Q ss_pred ccccccccccccc---cceeee-cCcccccCCC
Q 042575 106 KRRCEICNKKVGL---IEFRCR-CGHLYCGTHR 134 (169)
Q Consensus 106 ~~rC~~C~kkvgl---~gf~Cr-Cg~~FC~~HR 134 (169)
...|..|.+..|+ .|..|. |.+.+|..=+
T Consensus 55 ~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~ 87 (134)
T 1zbd_B 55 VNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 87 (134)
T ss_dssp SSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred CccccccCCCcccccCCCCCCCCCCcccccccC
Confidence 6799999999997 467999 9999998543
No 99
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=29.77 E-value=14 Score=18.16 Aligned_cols=11 Identities=18% Similarity=0.905 Sum_probs=6.5
Q ss_pred eeee-cCccccc
Q 042575 121 FRCR-CGHLYCG 131 (169)
Q Consensus 121 f~Cr-Cg~~FC~ 131 (169)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 5565 6666643
No 100
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=29.62 E-value=14 Score=17.73 Aligned_cols=11 Identities=18% Similarity=0.776 Sum_probs=6.8
Q ss_pred eeee-cCccccc
Q 042575 121 FRCR-CGHLYCG 131 (169)
Q Consensus 121 f~Cr-Cg~~FC~ 131 (169)
|.|. ||..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 5666 6666654
No 101
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=29.59 E-value=20 Score=18.73 Aligned_cols=9 Identities=22% Similarity=0.789 Sum_probs=4.2
Q ss_pred ccccccccc
Q 042575 106 KRRCEICNK 114 (169)
Q Consensus 106 ~~rC~~C~k 114 (169)
+..|..|+|
T Consensus 11 ~~~C~~C~k 19 (37)
T 1p7a_A 11 PFQCPDCDR 19 (37)
T ss_dssp SBCCTTTCC
T ss_pred CccCCCCCc
Confidence 344544444
No 102
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.34 E-value=18 Score=18.89 Aligned_cols=10 Identities=20% Similarity=0.999 Sum_probs=5.0
Q ss_pred ceeee-cCccc
Q 042575 120 EFRCR-CGHLY 129 (169)
Q Consensus 120 gf~Cr-Cg~~F 129 (169)
.|.|. ||..|
T Consensus 9 ~~~C~~C~k~f 19 (37)
T 2elo_A 9 SYSCPVCEKSF 19 (37)
T ss_dssp CCEETTTTEEC
T ss_pred CcCCCCCCCcc
Confidence 45554 55544
No 103
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.57 E-value=15 Score=23.55 Aligned_cols=24 Identities=25% Similarity=0.376 Sum_probs=11.2
Q ss_pred ccccccccccccceeeecCccccc
Q 042575 108 RCEICNKKVGLIEFRCRCGHLYCG 131 (169)
Q Consensus 108 rC~~C~kkvgl~gf~CrCg~~FC~ 131 (169)
+|..|++.+....|.=+=|..||.
T Consensus 41 ~C~~C~~~L~~~~~~~~~g~~yC~ 64 (77)
T 1g47_A 41 VCAQCFQQFPEGLFYEFEGRKYCE 64 (77)
T ss_dssp CCTTTCCCCGGGCSEEETTEEECH
T ss_pred eECCCCCCCCCCCeEeECCeEeCH
Confidence 444555555444444444444443
No 104
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=28.46 E-value=19 Score=25.13 Aligned_cols=31 Identities=19% Similarity=0.464 Sum_probs=23.1
Q ss_pred ccccccccccccc----cceeee-cCcccccCCCCC
Q 042575 106 KRRCEICNKKVGL----IEFRCR-CGHLYCGTHRYP 136 (169)
Q Consensus 106 ~~rC~~C~kkvgl----~gf~Cr-Cg~~FC~~HRy~ 136 (169)
...|..|++.+-. .-.+|+ ||++|-+-=-.|
T Consensus 27 ~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~aggay~~ 62 (83)
T 1vq8_Z 27 DHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKP 62 (83)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEECCSSSS
T ss_pred cCcCCCCCCcceeccCCCeEECCCCCCEecCCEecc
Confidence 6899999985433 237999 999998874444
No 105
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.45 E-value=21 Score=22.42 Aligned_cols=26 Identities=27% Similarity=0.626 Sum_probs=18.9
Q ss_pred ccccccccccccccceeeecCcccccC
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCGT 132 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 132 (169)
...|..|...+.- ...-.||++||..
T Consensus 20 ~~~C~IC~~~~~~-~~~~~CgH~fC~~ 45 (73)
T 2ysl_A 20 EVICPICLDILQK-PVTIDCGHNFCLK 45 (73)
T ss_dssp CCBCTTTCSBCSS-EEECTTCCEEEHH
T ss_pred CCEeccCCcccCC-eEEcCCCChhhHH
Confidence 5689999886553 3344899999963
No 106
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=28.27 E-value=15 Score=25.88 Aligned_cols=13 Identities=23% Similarity=0.774 Sum_probs=10.2
Q ss_pred cceeeecCccccc
Q 042575 119 IEFRCRCGHLYCG 131 (169)
Q Consensus 119 ~gf~CrCg~~FC~ 131 (169)
..+.||||..|--
T Consensus 22 y~ypCrCGd~F~i 34 (83)
T 1yop_A 22 FTYPCPCGDRFQI 34 (83)
T ss_dssp EEEEETTTEEEEE
T ss_pred EEEeCCCCCeEEE
Confidence 4688999988843
No 107
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.21 E-value=30 Score=22.47 Aligned_cols=29 Identities=24% Similarity=0.545 Sum_probs=22.3
Q ss_pred cccccccccccccceeeecCcccccCCCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTHRY 135 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~HRy 135 (169)
-+|..|++.|....|.=+=|..||..|-.
T Consensus 44 F~C~~C~~~L~~~~f~~~~~~~~C~~c~~ 72 (82)
T 2ehe_A 44 FRCCRCQRSLADEPFTCQDSELLCNDCYC 72 (82)
T ss_dssp SBCTTTCCBCSSCCEEEETTEEEETTTSS
T ss_pred CeecCCCCccCCCccEeeCCEEECHHHHh
Confidence 57888889887767777778888877653
No 108
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=27.67 E-value=39 Score=30.77 Aligned_cols=41 Identities=20% Similarity=0.391 Sum_probs=28.3
Q ss_pred ccccccccccc-cc--cceeee-cCcccccCCCCCCCCCCcccch
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHLYCGTHRYPKEHACTFDFK 146 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 146 (169)
+..|..|++.+ || +|++|. |+..+-..---.....|..|..
T Consensus 113 ~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~d~~ 157 (674)
T 3pfq_A 113 PTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHT 157 (674)
T ss_dssp CCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSSCCCSSSCSS
T ss_pred CCCCCccccccchhhcCccccccCCcchhhhhhhccCcccccccc
Confidence 67999999985 45 799999 9988733333333456766544
No 109
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=27.61 E-value=18 Score=17.58 Aligned_cols=11 Identities=27% Similarity=0.863 Sum_probs=6.4
Q ss_pred eeee-cCccccc
Q 042575 121 FRCR-CGHLYCG 131 (169)
Q Consensus 121 f~Cr-Cg~~FC~ 131 (169)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 5565 6666643
No 110
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.55 E-value=22 Score=18.39 Aligned_cols=10 Identities=20% Similarity=0.816 Sum_probs=4.8
Q ss_pred ceeee-cCccc
Q 042575 120 EFRCR-CGHLY 129 (169)
Q Consensus 120 gf~Cr-Cg~~F 129 (169)
.|.|. ||..|
T Consensus 9 ~~~C~~C~k~f 19 (36)
T 2elt_A 9 PYKCPQCSYAS 19 (36)
T ss_dssp SEECSSSSCEE
T ss_pred CCCCCCCCccc
Confidence 34554 54444
No 111
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.40 E-value=18 Score=22.86 Aligned_cols=27 Identities=19% Similarity=0.435 Sum_probs=15.9
Q ss_pred cccccccccccccceeeecCcccccCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTH 133 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 133 (169)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1x4k_A 34 FICHRCQQPIGTKSFIPKDNQNFCVPC 60 (72)
T ss_dssp TCCSSSCCCCCSSSEEEETTEEEEHHH
T ss_pred CcccccCCccCCCccCccCCeEECHHH
Confidence 456667776665555555555666443
No 112
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=32.99 E-value=13 Score=18.25 Aligned_cols=13 Identities=23% Similarity=0.805 Sum_probs=8.0
Q ss_pred ceeee-cCcccccC
Q 042575 120 EFRCR-CGHLYCGT 132 (169)
Q Consensus 120 gf~Cr-Cg~~FC~~ 132 (169)
.|.|. ||..|-..
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 2lvt_A 2 PCQCVMCGKAFTQA 15 (29)
Confidence 35666 77777543
No 113
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=26.83 E-value=52 Score=20.99 Aligned_cols=26 Identities=27% Similarity=0.635 Sum_probs=19.1
Q ss_pred ccccccccccccccceeee-cCcccccC
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLYCGT 132 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~ 132 (169)
...|..|...+. ....-. ||++||..
T Consensus 15 ~~~C~IC~~~~~-~p~~~~~CgH~fC~~ 41 (74)
T 2yur_A 15 ELLCLICKDIMT-DAVVIPCCGNSYCDE 41 (74)
T ss_dssp GGSCSSSCCCCT-TCEECSSSCCEECTT
T ss_pred CCCCcCCChHHh-CCeEcCCCCCHHHHH
Confidence 578999976544 345567 99999963
No 114
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.33 E-value=26 Score=18.31 Aligned_cols=11 Identities=18% Similarity=0.926 Sum_probs=6.2
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|+|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (37)
T 2elp_A 9 AMKCPYCDFYFM 20 (37)
T ss_dssp CEECSSSSCEEC
T ss_pred CeECCCCChhhc
Confidence 45665 665554
No 115
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=26.33 E-value=17 Score=25.92 Aligned_cols=12 Identities=25% Similarity=0.819 Sum_probs=9.7
Q ss_pred ccceeeecCccc
Q 042575 118 LIEFRCRCGHLY 129 (169)
Q Consensus 118 l~gf~CrCg~~F 129 (169)
...+.||||..|
T Consensus 21 ~y~ypCrCGd~F 32 (89)
T 2jr7_A 21 TYFYPCPCGDNF 32 (89)
T ss_dssp EEEEECTTSSEE
T ss_pred EEEEcCCCCCEE
Confidence 346889999988
No 116
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=25.89 E-value=21 Score=24.23 Aligned_cols=22 Identities=45% Similarity=1.075 Sum_probs=18.0
Q ss_pred cccccccccccccc---ceeee-cCc
Q 042575 106 KRRCEICNKKVGLI---EFRCR-CGH 127 (169)
Q Consensus 106 ~~rC~~C~kkvgl~---gf~Cr-Cg~ 127 (169)
...|..|+..+.+. ...|+ ||+
T Consensus 28 ~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 28 KYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred EEECCCCCCcceeCCCCCccCCCCCc
Confidence 68999999997773 57898 876
No 117
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.86 E-value=24 Score=18.36 Aligned_cols=10 Identities=20% Similarity=0.946 Sum_probs=5.1
Q ss_pred ceeee-cCccc
Q 042575 120 EFRCR-CGHLY 129 (169)
Q Consensus 120 gf~Cr-Cg~~F 129 (169)
.|+|. ||..|
T Consensus 9 ~~~C~~C~k~f 19 (36)
T 2elv_A 9 LYDCHICERKF 19 (36)
T ss_dssp CEECSSSCCEE
T ss_pred CeECCCCCCcc
Confidence 35555 55545
No 118
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.77 E-value=52 Score=21.21 Aligned_cols=25 Identities=28% Similarity=0.715 Sum_probs=18.3
Q ss_pred ccccccccccccccceeeecCccccc
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 131 (169)
...|..|...+.- ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 39 (81)
T 2csy_A 15 PFRCFICRQAFQN-PVVTKCRHYFCE 39 (81)
T ss_dssp CSBCSSSCSBCCS-EEECTTSCEEEH
T ss_pred CCCCcCCCchhcC-eeEccCCCHhHH
Confidence 5689999876543 345579999985
No 119
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.76 E-value=20 Score=22.61 Aligned_cols=27 Identities=26% Similarity=0.454 Sum_probs=16.8
Q ss_pred cccccccccccccceeeecCcccccCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTH 133 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 133 (169)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1wyh_A 34 FLCSGCEQPLGSRSFVPDKGAHYCVPC 60 (72)
T ss_dssp CBCTTTCCBTTTSCEEEETTEEEEHHH
T ss_pred CeECCCCCcCCCCccCCcCCeEECHHH
Confidence 467777777766556555556666543
No 120
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.73 E-value=60 Score=19.16 Aligned_cols=25 Identities=24% Similarity=0.717 Sum_probs=18.5
Q ss_pred ccccccccccccccceeeecCccccc
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 131 (169)
...|..|...+.. ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 39 (58)
T 2ecj_A 15 EASCSVCLEYLKE-PVIIECGHNFCK 39 (58)
T ss_dssp CCBCSSSCCBCSS-CCCCSSCCCCCH
T ss_pred CCCCccCCcccCc-cEeCCCCCccCH
Confidence 5689999876544 344579999985
No 121
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.36 E-value=23 Score=18.86 Aligned_cols=12 Identities=17% Similarity=0.376 Sum_probs=7.0
Q ss_pred ceeee-cCccccc
Q 042575 120 EFRCR-CGHLYCG 131 (169)
Q Consensus 120 gf~Cr-Cg~~FC~ 131 (169)
.|+|. ||..|-.
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elm_A 9 LYYCSQCHYSSIT 21 (37)
T ss_dssp EEECSSSSCEEEC
T ss_pred CeECCCCCcccCC
Confidence 46666 6666643
No 122
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.28 E-value=24 Score=18.22 Aligned_cols=9 Identities=33% Similarity=1.121 Sum_probs=4.3
Q ss_pred ccccccccc
Q 042575 106 KRRCEICNK 114 (169)
Q Consensus 106 ~~rC~~C~k 114 (169)
+..|..|+|
T Consensus 9 ~~~C~~C~k 17 (36)
T 2elr_A 9 THLCDMCGK 17 (36)
T ss_dssp SCBCTTTCC
T ss_pred CeecCcCCC
Confidence 344555544
No 123
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.21 E-value=36 Score=21.04 Aligned_cols=25 Identities=24% Similarity=0.890 Sum_probs=17.1
Q ss_pred ccccccccccccc--------------cceeee-cCcccc
Q 042575 106 KRRCEICNKKVGL--------------IEFRCR-CGHLYC 130 (169)
Q Consensus 106 ~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC 130 (169)
+..|..|++.... ..|.|. ||..|-
T Consensus 18 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 57 (77)
T 2cot_A 18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFI 57 (77)
T ss_dssp SSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEES
T ss_pred CEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccC
Confidence 6789999887532 247777 776664
No 124
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=25.12 E-value=31 Score=24.14 Aligned_cols=26 Identities=23% Similarity=0.645 Sum_probs=17.9
Q ss_pred ccccccccccccccceee-ecCcccccC
Q 042575 106 KRRCEICNKKVGLIEFRC-RCGHLYCGT 132 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~C-rCg~~FC~~ 132 (169)
...|..|..-+.- ...- .||++||..
T Consensus 22 ~~~C~IC~~~~~~-pv~~~~CgH~fC~~ 48 (117)
T 1jm7_B 22 LLRCSRCTNILRE-PVCLGGCEHIFCSN 48 (117)
T ss_dssp TTSCSSSCSCCSS-CBCCCSSSCCBCTT
T ss_pred CCCCCCCChHhhC-ccEeCCCCCHHHHH
Confidence 4689999765433 3444 799999964
No 125
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.06 E-value=12 Score=24.45 Aligned_cols=23 Identities=17% Similarity=0.420 Sum_probs=9.6
Q ss_pred ccccccccccccceeeecCcccc
Q 042575 108 RCEICNKKVGLIEFRCRCGHLYC 130 (169)
Q Consensus 108 rC~~C~kkvgl~gf~CrCg~~FC 130 (169)
+|..|++.|....|.=+=|..||
T Consensus 43 ~C~~C~~~L~~~~~~~~~g~~yC 65 (79)
T 1x62_A 43 VCTDCGTNLKQKGHFFVEDQIYC 65 (79)
T ss_dssp SCSSSCCCHHHHCCEESSSCEEC
T ss_pred eeCCCCCCCCCCCeEeECCEEEC
Confidence 44444554433333333344444
No 126
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=24.99 E-value=20 Score=23.41 Aligned_cols=26 Identities=19% Similarity=0.517 Sum_probs=13.6
Q ss_pred cccccccccccccceeeecCcccccC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGT 132 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 132 (169)
-+|..|++.|....|.=+=|..||..
T Consensus 35 F~C~~C~~~L~~~~~~~~~~~~yC~~ 60 (81)
T 1a7i_A 35 FLCMVCRKNLDSTTVAIHDAEVYCKS 60 (81)
T ss_dssp EECSSSCCEECSSCCEEETTEEECSH
T ss_pred CccCCCCCCCCCCCeEeeCCEEECHH
Confidence 35556666655544544444555543
No 127
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.84 E-value=22 Score=22.41 Aligned_cols=26 Identities=27% Similarity=0.529 Sum_probs=14.3
Q ss_pred cccccccccccccceeeecCcccccC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGT 132 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 132 (169)
-+|..|++.|....|.=+=|..||..
T Consensus 32 F~C~~C~~~L~~~~~~~~~~~~yC~~ 57 (70)
T 2d8z_A 32 FVCTACRKQLSGQRFTARDDFAYCLN 57 (70)
T ss_dssp SBCSSSCCBCTTSCCEESSSSEECHH
T ss_pred CccCCCCCcCCcCceEeeCCeEECHH
Confidence 45667777665544544444555543
No 128
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.81 E-value=24 Score=18.33 Aligned_cols=11 Identities=27% Similarity=0.987 Sum_probs=5.2
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2els_A 9 IFTCEYCNKVFK 20 (36)
T ss_dssp CEECTTTCCEES
T ss_pred CEECCCCCceeC
Confidence 34554 555453
No 129
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.78 E-value=29 Score=22.23 Aligned_cols=25 Identities=24% Similarity=0.478 Sum_probs=15.7
Q ss_pred cccccccccccccceeeecCccccc
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCG 131 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~ 131 (169)
-+|..|++.|....|.=+=|..||.
T Consensus 37 F~C~~C~~~L~~~~~~~~~g~~yC~ 61 (76)
T 2cu8_A 37 LKCERCSKTLTPGGHAEHDGKPFCH 61 (76)
T ss_dssp CBCSSSCCBCCTTSCEEETTEEECT
T ss_pred CCCCCCCCccCCCceEeECCEEecc
Confidence 4667777776655555555566665
No 130
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.49 E-value=60 Score=20.86 Aligned_cols=26 Identities=27% Similarity=0.530 Sum_probs=19.0
Q ss_pred cccccccccccccc---ceeeecCccccc
Q 042575 106 KRRCEICNKKVGLI---EFRCRCGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl~---gf~CrCg~~FC~ 131 (169)
...|..|...+... ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~ 43 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICR 43 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEH
T ss_pred CCCCccCCccccccCCCeEECCCCChhhH
Confidence 56899998876541 344579999996
No 131
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.45 E-value=23 Score=23.71 Aligned_cols=11 Identities=27% Similarity=0.758 Sum_probs=7.0
Q ss_pred ccccccccccc
Q 042575 106 KRRCEICNKKV 116 (169)
Q Consensus 106 ~~rC~~C~kkv 116 (169)
..+|..|++.|
T Consensus 25 ~~~C~~C~~~I 35 (90)
T 2dar_A 25 TPMCAHCNQVI 35 (90)
T ss_dssp CCBBSSSCCBC
T ss_pred CCCCccCCCEe
Confidence 45677776655
No 132
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=24.38 E-value=54 Score=23.49 Aligned_cols=24 Identities=25% Similarity=0.792 Sum_probs=18.8
Q ss_pred ccccccccccccccceeee-cCccc
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLY 129 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~F 129 (169)
.-.|..|.--..-.-|.|| |+++|
T Consensus 15 D~~C~VC~~~t~~~l~pCRvC~Rvf 39 (89)
T 1wil_A 15 DEMCDVCEVWTAESLFPCRVCTRVF 39 (89)
T ss_dssp SCCCTTTCCCCSSCCSSCSSSSSCC
T ss_pred CcccCccccccccceeccccccccc
Confidence 5689999865555568999 99988
No 133
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=24.28 E-value=35 Score=25.54 Aligned_cols=28 Identities=21% Similarity=0.623 Sum_probs=22.1
Q ss_pred ccccccccccccccceeee-cCcccccCCCC
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLYCGTHRY 135 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy 135 (169)
..+|..|.....| +-|- ||++.|++..|
T Consensus 34 ~~~C~~C~~~~~L--wlCL~CG~vgCgr~~~ 62 (129)
T 2g45_A 34 GWKCSKCDMRENL--WLNLTDGSILCGRRYF 62 (129)
T ss_dssp BCCCSSSSCCSSE--EEETTTCCEEECCBCT
T ss_pred CCcCccccCcCce--EEeccCCccccCcccc
Confidence 4589999887543 7788 99999997655
No 134
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.17 E-value=22 Score=23.08 Aligned_cols=27 Identities=26% Similarity=0.518 Sum_probs=18.2
Q ss_pred cccccccccccccceeeecCcccccCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTH 133 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 133 (169)
-+|..|++.|....|.=+=|..||..|
T Consensus 44 F~C~~C~~~L~~~~~~~~~~~~yC~~c 70 (82)
T 1x63_A 44 FTCSNCKQVIGTGSFFPKGEDFYCVTC 70 (82)
T ss_dssp CCCSSSCCCCTTSCEEEETTEEEEHHH
T ss_pred CchhhCCCccCCCccEeeCCEEECHHH
Confidence 467788887776666656666676544
No 135
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.15 E-value=35 Score=21.70 Aligned_cols=26 Identities=27% Similarity=0.749 Sum_probs=18.7
Q ss_pred ccccccccccccccceeeecCcccccC
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCGT 132 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 132 (169)
...|..|...+.- ...-.||++||..
T Consensus 19 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 44 (85)
T 2ecv_A 19 EVTCPICLELLTQ-PLSLDCGHSFCQA 44 (85)
T ss_dssp CCCCTTTCSCCSS-CBCCSSSCCBCTT
T ss_pred CCCCCCCCcccCC-ceeCCCCCHHHHH
Confidence 5689999886543 3344799999964
No 136
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=24.01 E-value=18 Score=18.67 Aligned_cols=11 Identities=27% Similarity=0.863 Sum_probs=6.7
Q ss_pred eeee-cCccccc
Q 042575 121 FRCR-CGHLYCG 131 (169)
Q Consensus 121 f~Cr-Cg~~FC~ 131 (169)
|+|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (32)
T 2kfq_A 3 FACPACPKRFMR 14 (32)
T ss_dssp SSSSSSCTTHHH
T ss_pred CCCCCCCcccCC
Confidence 5565 6666654
No 137
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=23.91 E-value=28 Score=23.95 Aligned_cols=27 Identities=26% Similarity=0.685 Sum_probs=20.1
Q ss_pred cccccccccc-ccc--cc-eeee-cCcccccC
Q 042575 106 KRRCEICNKK-VGL--IE-FRCR-CGHLYCGT 132 (169)
Q Consensus 106 ~~rC~~C~kk-vgl--~g-f~Cr-Cg~~FC~~ 132 (169)
+..|..|+|. |.- +| -+|+ |+.+|=+-
T Consensus 27 ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AGG 58 (73)
T 1ffk_W 27 KYKCPVCGFPKLKRASTSIWVCGHCGYKIAGG 58 (73)
T ss_pred CccCCCCCCceeEEEEeEEEECCCCCcEEECC
Confidence 7899999983 222 23 6999 99998765
No 138
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=23.66 E-value=21 Score=25.08 Aligned_cols=12 Identities=25% Similarity=0.869 Sum_probs=9.7
Q ss_pred cceeeecCcccc
Q 042575 119 IEFRCRCGHLYC 130 (169)
Q Consensus 119 ~gf~CrCg~~FC 130 (169)
..+.||||..|-
T Consensus 29 y~y~CrCGd~F~ 40 (83)
T 1wge_A 29 YFYPCPCGDNFA 40 (83)
T ss_dssp EEECCSSSSCEE
T ss_pred EEEeCCCCCEEE
Confidence 468899999883
No 139
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=29.35 E-value=17 Score=17.77 Aligned_cols=13 Identities=15% Similarity=0.692 Sum_probs=8.0
Q ss_pred ceeee-cCcccccC
Q 042575 120 EFRCR-CGHLYCGT 132 (169)
Q Consensus 120 gf~Cr-Cg~~FC~~ 132 (169)
.|.|. ||..|-..
T Consensus 3 ~~~C~~C~k~f~~~ 16 (30)
T 2lvr_A 3 PYVCIHCQRQFADP 16 (30)
Confidence 36666 77777543
No 140
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=23.58 E-value=24 Score=20.24 Aligned_cols=13 Identities=31% Similarity=0.884 Sum_probs=7.3
Q ss_pred cceeee-cCccccc
Q 042575 119 IEFRCR-CGHLYCG 131 (169)
Q Consensus 119 ~gf~Cr-Cg~~FC~ 131 (169)
..|+|. ||+.|-.
T Consensus 7 kp~~C~~CgK~F~~ 20 (36)
T 1fv5_A 7 ARFMCLPCGIAFSS 20 (36)
T ss_dssp CCCEETTTTEECSC
T ss_pred cCeECCCCCCccCC
Confidence 346665 6666643
No 141
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.45 E-value=21 Score=23.93 Aligned_cols=26 Identities=35% Similarity=0.805 Sum_probs=11.9
Q ss_pred cccccccccccccceeeecCcccccC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGT 132 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 132 (169)
-+|..|++.|....|.=+=|..||..
T Consensus 43 F~C~~C~~~L~~~~~~~~~g~~yC~~ 68 (91)
T 2d8y_A 43 FRCSYCNNKLSLGTYASLHGRIYCKP 68 (91)
T ss_dssp CBCTTTCCBCCTTTCCCSSSCCCCHH
T ss_pred CeeCCCCCCCCCCCcEeECCEEECHH
Confidence 34555555554433433334444433
No 142
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.17 E-value=50 Score=21.54 Aligned_cols=24 Identities=33% Similarity=0.863 Sum_probs=19.8
Q ss_pred ccccccccccccccceeee-cCcccccC
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLYCGT 132 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~ 132 (169)
...|..|+. ..-|+|- |+..||++
T Consensus 12 ~~~C~vC~~---~~kY~CPrC~~~yCSl 36 (56)
T 2yqq_A 12 TVVCVICLE---KPKYRCPACRVPYCSV 36 (56)
T ss_dssp CCCCTTTCS---CCSEECTTTCCEESSH
T ss_pred CCccCcCcC---CCeeeCCCCCCCeeCH
Confidence 457999988 4468997 99999986
No 143
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.14 E-value=52 Score=20.31 Aligned_cols=26 Identities=31% Similarity=0.775 Sum_probs=18.6
Q ss_pred ccccccccccccccceeeecCcccccC
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCGT 132 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 132 (169)
...|..|...+.. ...-.||++||..
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 40 (66)
T 2ecy_A 15 KYKCEKCHLVLCS-PKQTECGHRFCES 40 (66)
T ss_dssp CEECTTTCCEESS-CCCCSSSCCCCHH
T ss_pred CCCCCCCChHhcC-eeECCCCCHHHHH
Confidence 5789999876543 3445899999963
No 144
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=22.91 E-value=55 Score=20.73 Aligned_cols=26 Identities=23% Similarity=0.737 Sum_probs=17.4
Q ss_pred ccccccccccccc--------------cceeee-cCccccc
Q 042575 106 KRRCEICNKKVGL--------------IEFRCR-CGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 131 (169)
+..|..|++.... ..|.|. |+..|-.
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 48 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAAD 48 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESS
T ss_pred CeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCC
Confidence 6778888776432 347887 8777754
No 145
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.58 E-value=29 Score=18.66 Aligned_cols=11 Identities=36% Similarity=1.307 Sum_probs=5.0
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 11 ~~~C~~C~k~f~ 22 (42)
T 2ytb_A 11 PYRCDQCGKAFS 22 (42)
T ss_dssp SBCCTTTTCCBS
T ss_pred CeeCCCccchhC
Confidence 34444 444443
No 146
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=22.51 E-value=31 Score=18.49 Aligned_cols=11 Identities=27% Similarity=1.032 Sum_probs=5.7
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 11 ~~~C~~C~k~f~ 22 (42)
T 2epc_A 11 PYLCGQCGKSFT 22 (42)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCcccC
Confidence 45555 555553
No 147
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.97 E-value=48 Score=20.26 Aligned_cols=26 Identities=31% Similarity=0.796 Sum_probs=18.2
Q ss_pred cccccccccccccc------ceeeecCccccc
Q 042575 106 KRRCEICNKKVGLI------EFRCRCGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl~------gf~CrCg~~FC~ 131 (169)
...|..|...+... ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~ 46 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCS 46 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECSSSCEEEH
T ss_pred CCCCcccCccccccccccCCeEeCCCCChhcH
Confidence 56899998765432 145569999985
No 148
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=21.85 E-value=36 Score=29.73 Aligned_cols=41 Identities=27% Similarity=0.528 Sum_probs=26.1
Q ss_pred ccccccccccc-cc--cceeee-cCcccccCCCCCCCCCCcccch
Q 042575 106 KRRCEICNKKV-GL--IEFRCR-CGHLYCGTHRYPKEHACTFDFK 146 (169)
Q Consensus 106 ~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 146 (169)
+..|..|++.+ |+ +|++|+ ||...=......-...|.-+.+
T Consensus 220 pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~~~~ 264 (463)
T 3cxl_A 220 PHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLK 264 (463)
T ss_dssp CCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSCSBCCGGGG
T ss_pred CCcchhhhhhhhhHHhcCeeccccCcccccccccccccccccccc
Confidence 78999999986 55 599999 8875411111111346776654
No 149
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=21.75 E-value=34 Score=23.71 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=17.8
Q ss_pred ccccccccccccccceeeecCccccc
Q 042575 106 KRRCEICNKKVGLIEFRCRCGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 131 (169)
...|..|...+.- ...-.||++||.
T Consensus 15 ~~~C~iC~~~~~~-p~~~~CgH~fC~ 39 (115)
T 3l11_A 15 ECQCGICMEILVE-PVTLPCNHTLCK 39 (115)
T ss_dssp HHBCTTTCSBCSS-CEECTTSCEECH
T ss_pred CCCCccCCcccCc-eeEcCCCCHHhH
Confidence 5689999876443 333379999996
No 150
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=21.75 E-value=75 Score=20.55 Aligned_cols=26 Identities=15% Similarity=0.590 Sum_probs=19.2
Q ss_pred ccccccccccccc--------------cceeee-cCccccc
Q 042575 106 KRRCEICNKKVGL--------------IEFRCR-CGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 131 (169)
+..|..|++.... ..|.|. |+..|-.
T Consensus 17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 57 (106)
T 2ee8_A 17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRR 57 (106)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSC
T ss_pred CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCC
Confidence 6789999887532 358898 8888854
No 151
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=21.61 E-value=31 Score=23.43 Aligned_cols=18 Identities=22% Similarity=0.685 Sum_probs=14.9
Q ss_pred cceeee-cCcccccCCCCC
Q 042575 119 IEFRCR-CGHLYCGTHRYP 136 (169)
Q Consensus 119 ~gf~Cr-Cg~~FC~~HRy~ 136 (169)
....|. ||..||..++.+
T Consensus 42 ~~v~C~~C~~~FC~~C~~~ 60 (86)
T 2ct7_A 42 LEATCPQCHQTFCVRCKRQ 60 (86)
T ss_dssp SCEECTTTCCEECSSSCSB
T ss_pred CceEeCCCCCccccccCCc
Confidence 347896 999999999874
No 152
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.59 E-value=33 Score=18.86 Aligned_cols=10 Identities=30% Similarity=1.311 Sum_probs=5.2
Q ss_pred ceeee-cCccc
Q 042575 120 EFRCR-CGHLY 129 (169)
Q Consensus 120 gf~Cr-Cg~~F 129 (169)
.|.|. ||..|
T Consensus 12 ~~~C~~C~k~F 22 (44)
T 2epv_A 12 PYECNECGKAF 22 (44)
T ss_dssp SEECSSSCCEE
T ss_pred CeECCCCCccc
Confidence 45555 55555
No 153
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.14 E-value=32 Score=18.46 Aligned_cols=9 Identities=22% Similarity=1.124 Sum_probs=4.1
Q ss_pred eeee-cCccc
Q 042575 121 FRCR-CGHLY 129 (169)
Q Consensus 121 f~Cr-Cg~~F 129 (169)
|.|. ||..|
T Consensus 11 ~~C~~C~k~f 20 (42)
T 2yte_A 11 YSCAECKETF 20 (42)
T ss_dssp CBCTTTCCBC
T ss_pred eECCCCCCcc
Confidence 4444 44444
No 154
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.04 E-value=37 Score=18.84 Aligned_cols=10 Identities=30% Similarity=1.042 Sum_probs=5.1
Q ss_pred cccccccccc
Q 042575 106 KRRCEICNKK 115 (169)
Q Consensus 106 ~~rC~~C~kk 115 (169)
+..|..|+|.
T Consensus 12 ~~~C~~C~k~ 21 (46)
T 2eon_A 12 PYKCQVCGKA 21 (46)
T ss_dssp SCBCSSSCCB
T ss_pred ccCCCCCCcc
Confidence 4455555554
No 155
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A
Probab=21.02 E-value=17 Score=31.26 Aligned_cols=31 Identities=26% Similarity=0.547 Sum_probs=21.5
Q ss_pred ccccccccccccccceeee-cCcccccCCCCC
Q 042575 106 KRRCEICNKKVGLIEFRCR-CGHLYCGTHRYP 136 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~ 136 (169)
..+|..|...-...-+-|- ||.+.|+.+++.
T Consensus 48 ~~~C~~c~~~~~~~~~~cl~cg~~~c~~~~h~ 79 (476)
T 3mhs_A 48 TMKCGTCHEINSGATFMCLQCGFCGCWNHSHF 79 (476)
T ss_dssp HSBCTTTCCBCSSSEEEESSSSCEEETTTTHH
T ss_pred CCCcccccCCCCCCceEeCCCCCCccCCchHH
Confidence 3579999765213348898 999999864433
No 156
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=20.92 E-value=33 Score=18.23 Aligned_cols=9 Identities=22% Similarity=1.091 Sum_probs=4.3
Q ss_pred eeee-cCccc
Q 042575 121 FRCR-CGHLY 129 (169)
Q Consensus 121 f~Cr-Cg~~F 129 (169)
|.|. ||..|
T Consensus 7 ~~C~~C~k~f 16 (39)
T 1njq_A 7 YTCSFCKREF 16 (39)
T ss_dssp EECTTTCCEE
T ss_pred eECCCCCccc
Confidence 4444 44444
No 157
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.87 E-value=38 Score=18.60 Aligned_cols=9 Identities=33% Similarity=0.711 Sum_probs=4.3
Q ss_pred ccccccccc
Q 042575 106 KRRCEICNK 114 (169)
Q Consensus 106 ~~rC~~C~k 114 (169)
+..|..|+|
T Consensus 12 ~~~C~~C~k 20 (47)
T 2epx_A 12 PYECIECGK 20 (47)
T ss_dssp SBCCSSSCC
T ss_pred CEECCccCc
Confidence 344555444
No 158
>2i50_A Ubiquitin carboxyl-terminal hydrolase 16; alpha/beta zinc-finger, ring-finger, ZNF-UBP, metalloprotein, ubiquitin-binding protein, USP; NMR {Homo sapiens}
Probab=20.68 E-value=32 Score=25.55 Aligned_cols=27 Identities=30% Similarity=0.673 Sum_probs=19.1
Q ss_pred ccccccccccc------------cccceeee-cCcccccC
Q 042575 106 KRRCEICNKKV------------GLIEFRCR-CGHLYCGT 132 (169)
Q Consensus 106 ~~rC~~C~kkv------------gl~gf~Cr-Cg~~FC~~ 132 (169)
..+|..|.+-- ...-..|- ||++.|+.
T Consensus 28 ~~~C~~C~~~~~~~~~~~~~~~~~~~Lw~CL~CG~vgCgr 67 (126)
T 2i50_A 28 WNICQDCKTDNKVKDKAEEETEEKPSVWLCLKCGHQGCGR 67 (126)
T ss_dssp SSSCHHHHTCTTSSCSSCTTTCCCCCEEEETTTCCEEECT
T ss_pred CCcCccccccccccccccccccccccceeeeeCCccccCC
Confidence 46799998731 12336787 99999986
No 159
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=20.61 E-value=33 Score=19.67 Aligned_cols=12 Identities=33% Similarity=1.029 Sum_probs=7.1
Q ss_pred ceeee-cCccccc
Q 042575 120 EFRCR-CGHLYCG 131 (169)
Q Consensus 120 gf~Cr-Cg~~FC~ 131 (169)
.|.|. ||..|-.
T Consensus 7 p~~C~~C~k~F~~ 19 (48)
T 3iuf_A 7 PYACDICGKRYKN 19 (48)
T ss_dssp CEECTTTCCEESS
T ss_pred CEECCCcCcccCC
Confidence 46665 6666643
No 160
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=20.37 E-value=45 Score=23.11 Aligned_cols=19 Identities=16% Similarity=0.648 Sum_probs=13.6
Q ss_pred ccccccccccccccceeee
Q 042575 106 KRRCEICNKKVGLIEFRCR 124 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~Cr 124 (169)
+..|..|+++..-..|.|.
T Consensus 47 ~~~C~~C~~~~~~~~Y~C~ 65 (89)
T 1v5n_A 47 VYTCDKCEEEGTIWSYHCD 65 (89)
T ss_dssp SCCCTTTSCCCCSCEEECT
T ss_pred CeEeCCCCCcCCCcEEEcC
Confidence 5789999998544456665
No 161
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.33 E-value=69 Score=20.15 Aligned_cols=25 Identities=24% Similarity=0.475 Sum_probs=18.1
Q ss_pred ccccccccccccccceee-ecCccccc
Q 042575 106 KRRCEICNKKVGLIEFRC-RCGHLYCG 131 (169)
Q Consensus 106 ~~rC~~C~kkvgl~gf~C-rCg~~FC~ 131 (169)
...|..|...+.- ...- .||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~~CgH~fC~ 40 (72)
T 2djb_A 15 YILCSICKGYLID-ATTITECLHTFCK 40 (72)
T ss_dssp GGSCTTTSSCCSS-CEECSSSCCEECH
T ss_pred CCCCCCCChHHHC-cCEECCCCCHHHH
Confidence 5689999775443 4444 79999986
No 162
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=20.33 E-value=27 Score=22.33 Aligned_cols=27 Identities=19% Similarity=0.471 Sum_probs=16.4
Q ss_pred cccccccccccccceeeecCcccccCC
Q 042575 107 RRCEICNKKVGLIEFRCRCGHLYCGTH 133 (169)
Q Consensus 107 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 133 (169)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 47 F~C~~C~~~L~~~~f~~~~~~~yC~~c 73 (77)
T 2egq_A 47 FHCKKCSVNLANKRFVFHQEQVYCPDC 73 (77)
T ss_dssp CBCSSSCCBCTTSCCCEETTEECCHHH
T ss_pred CEehhcCCCCCCCccEeECCEEEChHH
Confidence 466777777665555555556666543
No 163
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.32 E-value=33 Score=18.42 Aligned_cols=11 Identities=27% Similarity=1.192 Sum_probs=5.5
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 11 ~~~C~~C~k~f~ 22 (42)
T 2en2_A 11 PYKCETCGARFV 22 (42)
T ss_dssp SEECTTTCCEES
T ss_pred CEeCCCcChhhC
Confidence 35554 555553
No 164
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=20.25 E-value=37 Score=18.23 Aligned_cols=11 Identities=27% Similarity=1.123 Sum_probs=5.6
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|+|. ||..|-
T Consensus 10 ~~~C~~C~k~f~ 21 (42)
T 2el5_A 10 PYECSECGKAFN 21 (42)
T ss_dssp SEECSSSCCEES
T ss_pred CccCCCcChhhC
Confidence 45555 555553
No 165
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.14 E-value=36 Score=18.78 Aligned_cols=10 Identities=30% Similarity=1.487 Sum_probs=4.5
Q ss_pred eeee-cCcccc
Q 042575 121 FRCR-CGHLYC 130 (169)
Q Consensus 121 f~Cr-Cg~~FC 130 (169)
|.|. ||..|-
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2enf_A 13 YKCNECGKVFT 23 (46)
T ss_dssp CBCSSSCCBCS
T ss_pred eECCCCCcccC
Confidence 4444 444443
No 166
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.05 E-value=36 Score=18.71 Aligned_cols=11 Identities=27% Similarity=1.195 Sum_probs=5.4
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2eow_A 12 PYKCNECGKAFR 23 (46)
T ss_dssp CEECTTSCCEES
T ss_pred CeeccccCChhc
Confidence 35554 555443
No 167
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.03 E-value=42 Score=18.48 Aligned_cols=11 Identities=27% Similarity=1.171 Sum_probs=5.1
Q ss_pred ceeee-cCcccc
Q 042575 120 EFRCR-CGHLYC 130 (169)
Q Consensus 120 gf~Cr-Cg~~FC 130 (169)
.|.|. ||..|-
T Consensus 12 ~~~C~~C~k~F~ 23 (46)
T 2emi_A 12 HYECSECGKAFI 23 (46)
T ss_dssp CEECSSSCCEES
T ss_pred CCCCCCCCcccC
Confidence 34554 544443
Done!