BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042587
(99 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80915|PR1B4_ARATH PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1
Length = 220
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 9 LIFAHIFRDHETLSVLIILSVFIIFLTSIRSVLILGLMAGDGLSCAHGVFRVLEDLVLDE 68
++F F D ETL LI+ S+F+IFLT + SVL+ +M G L CAHG FR EDL LDE
Sbjct: 133 VLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFRAPEDLFLDE 192
Query: 69 QEPSANTRFLSF 80
QEP+A T FLSF
Sbjct: 193 QEPAA-TGFLSF 203
>sp|Q9LYN0|PR1B1_ARATH PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1
Length = 209
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 9 LIFAHIFRDHETLSVLIILSVFIIFLTSIRSVLILGLMAGDGLSCAHGVFRVLEDLVLDE 68
++F F D ETL L++ ++ ++F+TS+ S+L LM G + C HG F V +DL LDE
Sbjct: 123 VVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDE 182
Query: 69 QEPSANTRFLSF 80
QEP AN LSF
Sbjct: 183 QEP-ANAGLLSF 193
>sp|Q9FLB6|PR1B3_ARATH PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1
Length = 217
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 9 LIFAHIFRDHETLSVLIILSVFIIFLTSIRSVLILGLMAGDGLSCAHGVFRVLEDLVLDE 68
++ F D ETL VL+IL++ ++FLTS+ S+L LM G G+ C HG FRV EDL LD+
Sbjct: 126 VVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDD 185
Query: 69 QEPSANTRFLSF 80
QEP ANT LSF
Sbjct: 186 QEP-ANTGLLSF 196
>sp|Q9SIY7|PR1B2_ARATH PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1
Length = 213
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 9 LIFAHIFRDHETLSVLIILSVFIIFLTSIRSVLILGLMAGDGLSCAHGVFRVLEDLVLDE 68
++F F D ETL L++ ++ ++F+TS+ S+L L G + C HG FRV +DL LDE
Sbjct: 125 VLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDE 184
Query: 69 QEPSANTRFLSF 80
QEP AN LSF
Sbjct: 185 QEP-ANAGLLSF 195
>sp|Q9M012|PR1B5_ARATH PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1
Length = 223
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 9 LIFAHIFRDHETLSVLIILSVFIIFLTSIRSVLILGLMAGDGLSCAHGVFRVLEDLVLDE 68
++F F ++ETL LI+ ++ +IF TS+ SVLI LM G C HG FR +DL LDE
Sbjct: 133 ILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPDDLFLDE 192
Query: 69 QEPSANTRFLSF 80
Q+ A + FLSF
Sbjct: 193 QD-HAASGFLSF 203
>sp|Q9LYQ4|PR1B6_ARATH PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1
Length = 216
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 9 LIFAHIFRDHETLSVLIILSVFIIFLTSIRSVLILGLMAGDGLSCAHGVFRVLEDLVLDE 68
+I F D ETL +L + +V ++F+TS+ S+L+ L G HG FR EDL L+E
Sbjct: 123 VIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMGVAIHGAFRAPEDLFLEE 182
Query: 69 QE 70
QE
Sbjct: 183 QE 184
>sp|Q9LIC7|PR1F4_ARATH PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1
Length = 188
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 17 DHETLSVLIILSVFIIFLTSIRSVLILGLMAGDGLSCAHGVFRVLEDLVLDEQEPSANTR 76
D L L ++++ ++ LT+ ++ LMAG L H V R +DL LDE+ + T
Sbjct: 121 DRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAATTETS 180
Query: 77 FL-SFPDS 83
L S P S
Sbjct: 181 GLTSHPSS 188
>sp|Q9FH16|PR1G2_ARATH PRA1 family protein G2 OS=Arabidopsis thaliana GN=PRA1G2 PE=2 SV=1
Length = 186
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 17 DHETLSVLIILSVFIIFLTSIRSVLILGLMAGDGLSCAHGVFRVLEDLVLDEQE 70
D L L++ SV+ I+ T+ L +G+ G L H VFR ++L L+E +
Sbjct: 121 DRTVLLFLVLASVWAIWFTNSAVNLAVGVSVGLLLCIIHAVFRNSDELFLEEDD 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,966,266
Number of Sequences: 539616
Number of extensions: 958256
Number of successful extensions: 2949
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2935
Number of HSP's gapped (non-prelim): 16
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)