Query 042589
Match_columns 429
No_of_seqs 464 out of 2783
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 13:08:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042589.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042589hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.7E-23 5.7E-28 187.2 9.9 138 80-228 17-154 (169)
2 1oy3_D Transcription factor in 99.8 6E-21 2E-25 181.4 13.3 186 30-228 9-243 (282)
3 3hra_A Ankyrin repeat family p 99.8 1.1E-21 3.7E-26 177.7 6.9 186 30-227 5-195 (201)
4 4b93_B Ankyrin repeat domain-c 99.8 6.2E-21 2.1E-25 182.9 8.7 184 31-227 12-202 (269)
5 1awc_B Protein (GA binding pro 99.8 1.1E-20 3.8E-25 164.4 8.3 136 80-227 15-150 (153)
6 1ihb_A P18-INK4C(INK6), cyclin 99.8 2.9E-20 9.9E-25 162.6 8.7 137 80-227 18-154 (162)
7 1yyh_A HN1;, notch 1, ankyrin 99.8 1.3E-20 4.4E-25 177.9 6.6 138 80-227 70-207 (253)
8 1k1a_A B-cell lymphoma 3-encod 99.8 3.2E-20 1.1E-24 172.4 9.0 186 30-227 9-200 (241)
9 3b7b_A Euchromatic histone-lys 99.8 5.8E-20 2E-24 170.6 10.6 184 30-227 11-194 (237)
10 2dzn_A Probable 26S proteasome 99.8 8.4E-20 2.9E-24 168.3 10.2 183 32-227 4-191 (228)
11 1yyh_A HN1;, notch 1, ankyrin 99.8 9.3E-20 3.2E-24 172.0 10.4 183 30-227 57-240 (253)
12 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.2E-19 4E-24 160.7 10.0 137 80-227 27-163 (169)
13 4hbd_A KN motif and ankyrin re 99.8 6.9E-20 2.4E-24 175.9 9.1 140 79-227 123-267 (276)
14 3aji_A 26S proteasome non-ATPa 99.8 1.2E-19 4.3E-24 167.7 10.2 181 33-227 9-189 (231)
15 4b93_B Ankyrin repeat domain-c 99.8 3.9E-20 1.3E-24 177.3 6.8 131 80-222 99-230 (269)
16 2rfm_A Putative ankyrin repeat 99.8 8.7E-20 3E-24 164.6 8.3 136 81-227 49-184 (192)
17 2rfa_A Transient receptor pote 99.8 6.1E-20 2.1E-24 170.1 6.6 91 136-227 118-214 (232)
18 1bd8_A P19INK4D CDK4/6 inhibit 99.8 4.3E-19 1.5E-23 154.3 11.3 134 80-227 15-150 (156)
19 3aji_A 26S proteasome non-ATPa 99.8 1.1E-19 3.9E-24 168.0 7.4 181 30-226 40-221 (231)
20 3ljn_A Hypothetical protein; a 99.8 8.8E-20 3E-24 181.0 6.5 92 135-227 134-228 (364)
21 3v31_A Ankyrin repeat family A 99.8 2.9E-19 9.9E-24 157.4 9.1 137 80-227 16-152 (167)
22 2f8y_A Notch homolog 1, transl 99.8 3.8E-19 1.3E-23 163.5 10.1 182 30-227 25-208 (223)
23 2xai_A ASB-9, ankyrin repeat a 99.8 1.3E-19 4.6E-24 171.8 7.1 134 80-227 49-183 (261)
24 1sw6_A Regulatory protein SWI6 99.8 2.4E-19 8.3E-24 176.2 8.9 132 80-221 144-327 (327)
25 2xai_A ASB-9, ankyrin repeat a 99.8 2.3E-19 8E-24 170.1 8.4 176 30-222 36-211 (261)
26 2fo1_E LIN-12 protein; beta-ba 99.8 1.2E-19 4E-24 181.6 6.6 190 29-227 165-363 (373)
27 2rfa_A Transient receptor pote 99.8 2.8E-19 9.5E-24 165.7 8.4 139 80-226 16-170 (232)
28 3v30_A DNA-binding protein rfx 99.8 1.1E-18 3.7E-23 154.5 10.6 136 81-227 16-152 (172)
29 2f8y_A Notch homolog 1, transl 99.8 4.5E-19 1.5E-23 163.0 8.4 138 80-227 38-175 (223)
30 1ikn_D Protein (I-kappa-B-alph 99.8 3.7E-19 1.3E-23 165.6 7.9 140 80-227 58-201 (236)
31 2etb_A Transient receptor pote 99.8 2.2E-19 7.4E-24 169.3 5.7 136 81-221 20-183 (256)
32 2jab_A H10-2-G3; HER2, darpin, 99.8 2.3E-18 7.8E-23 146.9 11.4 104 80-227 27-130 (136)
33 2dzn_A Probable 26S proteasome 99.8 7.2E-19 2.5E-23 162.0 8.8 177 30-221 36-219 (228)
34 1d9s_A Cyclin-dependent kinase 99.8 1.1E-18 3.9E-23 148.8 9.0 87 135-227 41-128 (136)
35 1k1a_A B-cell lymphoma 3-encod 99.8 2.4E-19 8.4E-24 166.4 4.7 183 30-228 46-234 (241)
36 3d9h_A CDNA FLJ77766, highly s 99.8 7.8E-19 2.7E-23 169.1 8.2 180 30-227 59-239 (285)
37 3t8k_A Uncharacterized protein 99.8 6.2E-19 2.1E-23 159.8 6.6 145 30-227 6-171 (186)
38 1s70_B 130 kDa myosin-binding 99.7 7.1E-19 2.4E-23 169.0 6.4 181 32-227 42-249 (299)
39 1ycs_B 53BP2, P53BP2; ankyrin 99.7 5.5E-19 1.9E-23 165.6 5.3 136 80-227 18-156 (239)
40 3utm_A Tankyrase-1; tankyrase, 99.7 3E-18 1E-22 167.4 10.7 187 30-228 58-298 (351)
41 3kea_A K1L; tropism, ANK repea 99.7 2.7E-19 9.3E-24 172.4 3.2 180 30-228 31-213 (285)
42 1wdy_A 2-5A-dependent ribonucl 99.7 3.2E-18 1.1E-22 162.0 10.6 141 80-227 85-236 (285)
43 3f6q_A Integrin-linked protein 99.7 1.5E-18 5E-23 154.9 7.7 133 83-227 21-155 (179)
44 4gpm_A Engineered protein OR26 99.7 1.4E-18 4.7E-23 155.2 7.4 154 33-197 7-160 (169)
45 3twr_A Tankyrase-2; ankyrin re 99.7 1.2E-18 4.3E-23 153.0 7.0 89 133-227 69-157 (165)
46 3ljn_A Hypothetical protein; a 99.7 1.3E-19 4.4E-24 179.8 0.7 125 97-228 134-262 (364)
47 3b7b_A Euchromatic histone-lys 99.7 2.6E-18 9E-23 159.4 9.4 139 79-227 23-161 (237)
48 3jxi_A Vanilloid receptor-rela 99.7 8.8E-19 3E-23 165.3 6.2 136 82-222 24-188 (260)
49 1s70_B 130 kDa myosin-binding 99.7 1.5E-18 5.1E-23 166.8 7.9 179 30-219 73-274 (299)
50 1n0q_A 3ANK, 3 ankyrin repeats 99.7 3.7E-18 1.3E-22 135.9 8.8 85 138-227 1-85 (93)
51 1wdy_A 2-5A-dependent ribonucl 99.7 3E-18 1E-22 162.2 9.6 141 79-228 117-271 (285)
52 3d9h_A CDNA FLJ77766, highly s 99.7 1.2E-18 4.2E-23 167.6 6.8 173 30-219 92-264 (285)
53 3aaa_C Myotrophin, protein V-1 99.7 2.9E-18 9.8E-23 143.6 8.1 98 80-221 20-117 (123)
54 1n11_A Ankyrin; clathrin, BAND 99.7 2.9E-18 9.8E-23 174.1 9.5 137 80-227 225-361 (437)
55 1ikn_D Protein (I-kappa-B-alph 99.7 1.3E-18 4.5E-23 161.8 6.2 134 84-227 25-168 (236)
56 1n11_A Ankyrin; clathrin, BAND 99.7 2.9E-18 9.9E-23 174.1 9.0 138 79-227 257-394 (437)
57 1oy3_D Transcription factor in 99.7 2.2E-18 7.7E-23 163.5 7.1 177 30-222 45-270 (282)
58 2pnn_A Transient receptor pote 99.7 1.2E-18 4E-23 166.0 5.1 136 83-223 33-197 (273)
59 1bi7_B P16INK4A, MTS1, multipl 99.7 1.2E-17 3.9E-22 145.9 10.7 125 81-217 26-151 (156)
60 3hra_A Ankyrin repeat family p 99.7 3.4E-18 1.2E-22 154.5 7.1 133 79-222 17-152 (201)
61 3c5r_A BARD-1, BRCA1-associate 99.7 5.9E-18 2E-22 144.3 8.1 88 135-227 39-126 (137)
62 2etb_A Transient receptor pote 99.7 2E-17 6.9E-22 155.7 10.9 117 80-227 103-238 (256)
63 3utm_A Tankyrase-1; tankyrase, 99.7 1.2E-17 4E-22 163.2 9.5 81 133-218 241-321 (351)
64 1n0r_A 4ANK, 4 ankyrin repeats 99.7 3.9E-17 1.3E-21 135.7 11.1 88 135-227 31-118 (126)
65 3v30_A DNA-binding protein rfx 99.7 5.6E-17 1.9E-21 143.3 11.2 119 101-228 2-120 (172)
66 3jxi_A Vanilloid receptor-rela 99.7 7.4E-17 2.5E-21 152.0 11.9 118 80-227 106-242 (260)
67 2fo1_E LIN-12 protein; beta-ba 99.7 1.2E-17 4.3E-22 166.9 6.8 142 80-228 179-331 (373)
68 3f6q_A Integrin-linked protein 99.7 9.7E-17 3.3E-21 143.0 11.8 119 100-227 4-122 (179)
69 3eu9_A Huntingtin-interacting 99.7 3.7E-17 1.3E-21 150.9 9.2 137 80-227 55-194 (240)
70 3twr_A Tankyrase-2; ankyrin re 99.7 1E-16 3.5E-21 140.7 11.3 89 134-227 37-125 (165)
71 2pnn_A Transient receptor pote 99.7 1E-16 3.4E-21 152.5 11.7 118 80-227 114-250 (273)
72 3deo_A Signal recognition part 99.7 9.6E-17 3.3E-21 144.0 10.1 86 135-225 72-158 (183)
73 3ehr_A Osteoclast-stimulating 99.7 3.5E-17 1.2E-21 151.0 7.2 105 80-227 86-190 (222)
74 2rfm_A Putative ankyrin repeat 99.7 3E-17 1E-21 147.8 6.4 121 97-227 31-151 (192)
75 1dcq_A PYK2-associated protein 99.7 2.3E-16 7.7E-21 151.9 12.1 91 133-228 163-256 (278)
76 4g8k_A 2-5A-dependent ribonucl 99.7 1.7E-16 6E-21 155.5 11.3 182 33-227 28-256 (337)
77 1sw6_A Regulatory protein SWI6 99.7 1.3E-17 4.4E-22 163.9 2.9 142 80-227 110-300 (327)
78 2zgd_A 3 repeat synthetic anky 99.7 1.2E-16 4.2E-21 131.5 7.5 90 133-227 18-107 (110)
79 3eu9_A Huntingtin-interacting 99.7 1.9E-16 6.4E-21 146.1 9.6 136 81-226 23-159 (240)
80 3v31_A Ankyrin repeat family A 99.7 1.2E-16 4.1E-21 140.5 7.8 118 100-227 2-119 (167)
81 3kea_A K1L; tropism, ANK repea 99.7 7.6E-17 2.6E-21 155.2 7.0 132 80-227 44-178 (285)
82 4hbd_A KN motif and ankyrin re 99.7 1.8E-17 6.2E-22 158.9 2.5 138 80-227 89-233 (276)
83 4g8k_A 2-5A-dependent ribonucl 99.7 3.6E-16 1.2E-20 153.3 11.7 86 134-228 234-319 (337)
84 2vge_A RELA-associated inhibit 99.7 1.3E-16 4.3E-21 149.1 7.8 87 135-226 50-139 (229)
85 1bd8_A P19INK4D CDK4/6 inhibit 99.6 3.9E-16 1.3E-20 135.5 10.2 89 133-227 30-118 (156)
86 3c5r_A BARD-1, BRCA1-associate 99.6 2.3E-16 8E-21 134.3 8.6 88 135-227 6-93 (137)
87 1bi7_B P16INK4A, MTS1, multipl 99.6 2E-17 6.9E-22 144.4 1.9 121 97-228 8-129 (156)
88 1ihb_A P18-INK4C(INK6), cyclin 99.6 1.3E-16 4.6E-21 139.2 6.1 155 32-197 7-161 (162)
89 3ui2_A Signal recognition part 99.6 6.1E-16 2.1E-20 145.5 11.1 85 135-224 73-158 (244)
90 2l6b_A NR1C; ankyrin, consensu 99.6 2.3E-16 7.9E-21 130.2 6.6 89 134-227 4-92 (115)
91 2vge_A RELA-associated inhibit 99.6 3.4E-16 1.1E-20 146.2 8.5 89 134-227 16-104 (229)
92 1ycs_B 53BP2, P53BP2; ankyrin 99.6 2.1E-16 7.3E-21 147.9 6.6 118 99-228 3-121 (239)
93 2b0o_E UPLC1; arfgap, structur 99.6 7E-16 2.4E-20 150.2 10.6 88 135-227 186-276 (301)
94 3aaa_C Myotrophin, protein V-1 99.6 5.2E-16 1.8E-20 129.7 8.2 87 136-227 4-90 (123)
95 3jue_A Arfgap with coiled-coil 99.6 1E-15 3.5E-20 153.2 11.4 108 79-228 212-319 (368)
96 3lvq_E ARF-GAP with SH3 domain 99.6 7E-16 2.4E-20 160.3 10.6 112 79-228 144-258 (497)
97 1awc_B Protein (GA binding pro 99.6 1.5E-15 5.3E-20 131.6 9.1 88 135-227 30-117 (153)
98 1d9s_A Cyclin-dependent kinase 99.6 3.8E-16 1.3E-20 133.1 5.1 90 133-228 6-96 (136)
99 2y1l_E Darpin-8.4; hydrolase-i 99.6 2.7E-15 9.1E-20 132.5 9.8 90 133-227 41-130 (169)
100 2jab_A H10-2-G3; HER2, darpin, 99.6 1.6E-15 5.5E-20 129.1 6.6 87 136-227 11-97 (136)
101 1n0r_A 4ANK, 4 ankyrin repeats 99.6 4.8E-15 1.6E-19 123.0 8.9 85 138-227 1-85 (126)
102 2b0o_E UPLC1; arfgap, structur 99.6 1.6E-15 5.5E-20 147.6 6.9 130 80-223 164-299 (301)
103 2l6b_A NR1C; ankyrin, consensu 99.6 1.1E-14 3.6E-19 120.1 9.2 75 135-214 38-112 (115)
104 3ehr_A Osteoclast-stimulating 99.5 3.3E-15 1.1E-19 137.7 6.3 91 133-228 67-158 (222)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.5 3.9E-14 1.3E-18 112.4 10.6 78 80-197 15-92 (93)
106 3deo_A Signal recognition part 99.5 3.9E-15 1.3E-19 133.4 5.1 86 136-227 41-127 (183)
107 3ui2_A Signal recognition part 99.5 1.1E-14 3.6E-19 137.0 4.2 87 136-228 42-129 (244)
108 3t8k_A Uncharacterized protein 99.5 1.4E-14 4.7E-19 131.1 4.7 82 137-223 36-128 (186)
109 2aja_A Ankyrin repeat family p 99.5 8.5E-16 2.9E-20 154.3 -4.9 133 81-228 80-217 (376)
110 3lvq_E ARF-GAP with SH3 domain 99.4 2.3E-13 7.8E-18 141.3 9.3 91 79-219 186-276 (497)
111 2aja_A Ankyrin repeat family p 99.4 2.4E-15 8.1E-20 151.1 -9.1 133 80-227 105-242 (376)
112 2zgd_A 3 repeat synthetic anky 99.4 2.5E-12 8.5E-17 105.4 10.6 57 135-192 53-109 (110)
113 1dcq_A PYK2-associated protein 99.4 4.4E-13 1.5E-17 128.8 6.3 63 134-197 200-262 (278)
114 3jue_A Arfgap with coiled-coil 99.2 7.3E-12 2.5E-16 125.2 6.7 87 137-228 197-286 (368)
115 1oed_A Acetylcholine receptor 22.3 4.1E+02 0.014 23.6 9.2 8 311-318 3-10 (227)
116 1gp8_A Protein (scaffolding pr 21.6 57 0.0019 20.7 2.1 19 141-159 15-33 (40)
117 4ev6_A Magnesium transport pro 20.3 1.1E+02 0.0038 28.9 5.1 21 355-375 281-301 (339)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=1.7e-23 Score=187.22 Aligned_cols=138 Identities=20% Similarity=0.168 Sum_probs=115.6
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
+++|+.|+++|+++| ..|..|+||+|.+.......... .+++.+.+ .+.+|.+|+||||+||+.|+.++|+.|+
T Consensus 17 ~~~v~~Ll~~Gadvn-~~d~~g~t~l~~a~~~~~~~~~~-~ll~~gad----~~~~d~~g~TpLh~A~~~g~~~~v~~Ll 90 (169)
T 4gpm_A 17 KDRVKDLIENGADVN-ASDSDGRTPLHHAAENGHKEVVK-LLISKGAD----VNAKDSDGRTPLHHAAENGHKEVVKLLI 90 (169)
T ss_dssp HHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHH-HHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCCHHHHH-HHHhcccc----hhhhccCCCCHHHHHHHcCCHHHHHHHH
Confidence 567799999999999 46677999999887644433321 12222222 2567889999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCccccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~~ 228 (429)
+++.+ ++.+|.+|+||||+|+.+|+.+++++|++.|+ +++.+|.+|+||||+|+..|+.+++++
T Consensus 91 ~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga----d~~~~d~~G~TpL~~A~~~g~~~iv~~ 154 (169)
T 4gpm_A 91 SKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGA----DVNTSDSDGRTPLDLAREHGNEEVVKL 154 (169)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 98766 57889999999999999999999999999998 899999999999999999999887764
No 2
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.85 E-value=6e-21 Score=181.36 Aligned_cols=186 Identities=12% Similarity=-0.032 Sum_probs=133.4
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchh----HHHHHHHHHhCCCCCCcccccCCCCcc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTW----AIQVFDELVDDRNPHVYKYVYNGREPR 105 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~----a~~iv~~Ll~~~a~~~~~~d~~G~~P~ 105 (429)
...|++.+|.. |..+.++.++ +...... .....+-.+....|.. ..+++++|+++|++++ ..+..|+||+
T Consensus 9 g~t~L~~A~~~-g~~~~v~~Ll-~~g~~~~---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~tpL 82 (282)
T 1oy3_D 9 GDTALHLAVIH-QHEPFLDFLL-GFSAGHE---YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL-VAERGGHTAL 82 (282)
T ss_dssp CCCHHHHHHHT-TCHHHHHHHH-HHHTTSG---GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTSCCHH
T ss_pred CCcHHHHHHHc-CCHHHHHHHH-hcCCCcc---cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHH
Confidence 45688888887 8888774333 2211100 0001111111222222 3689999999999999 4566799999
Q ss_pred cccccCCccccccccCCCC-CCC-------------------------------------------cccccccCCCCCCc
Q 042589 106 ISTFGQDVNAFTARETPPD-PNT-------------------------------------------YKKKNARRSRRKET 141 (429)
Q Consensus 106 ~~~~~~~~~~~~~i~ll~~-~~~-------------------------------------------~~~~~~~~d~~G~T 141 (429)
|.++..+..++ ++.+.+ +.. .....+..+..|.|
T Consensus 83 ~~A~~~~~~~~--v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 83 HLACRVRAHTC--ACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHTTTTCHHH--HHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHcCCcch--hHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 98876443322 222221 111 01124667889999
Q ss_pred HHHHHHHcCcHHHHHHHHHhCCCccccCCC-CCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHc
Q 042589 142 PILVAAKMGVTEMVKKILDTFPVAIWDLDP-GEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATY 220 (429)
Q Consensus 142 pLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~-~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~ 220 (429)
|||+|++.|+.+++++|++++.+. +..|. .|+||||+|+..|+.+++++|++.|+ ++|.+|.+|+||||+|+..
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga----d~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLKAGA----DPTARMYGGRTPLGSALLR 235 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHTS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCC----CCcccccCCCCHHHHHHHc
Confidence 999999999999999999998775 55554 59999999999999999999999998 8999999999999999999
Q ss_pred CCCccccc
Q 042589 221 GDHRPWHT 228 (429)
Q Consensus 221 g~~~~~~~ 228 (429)
|+.+++++
T Consensus 236 ~~~~~v~~ 243 (282)
T 1oy3_D 236 PNPILARL 243 (282)
T ss_dssp SCHHHHHH
T ss_pred CCcHHHHH
Confidence 99887764
No 3
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.84 E-value=1.1e-21 Score=177.71 Aligned_cols=186 Identities=16% Similarity=0.028 Sum_probs=134.4
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTF 109 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~ 109 (429)
...|++.+|.+ |+.+.+++++.+...........+...++-.... ...+++++|+++|++++ ..+..|.||+|.+.
T Consensus 5 ~~~~L~~A~~~-g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 5 EVGALLEAANQ-RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHN--NDIEIAKALIDRGADIN-LQNSISDSPYLYAG 80 (201)
T ss_dssp CTTHHHHHHHT-TCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHH--TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred cccHHHHHHHh-ccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc--CCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHH
Confidence 45678888888 8888875544111101111111111111111111 13789999999999999 45566999999887
Q ss_pred cCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCC----
Q 042589 110 GQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQ---- 185 (429)
Q Consensus 110 ~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~---- 185 (429)
..+..++ ++.+.+.... ..+..|..|.||||+|+..|+.++++.|+++++..++.+|..|+||||+|+..++
T Consensus 81 ~~~~~~~--~~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 81 AQGRTEI--LAYMLKHATP--DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL 156 (201)
T ss_dssp HTTCHHH--HHHHHHHSCC--CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH
T ss_pred HcCCHHH--HHHHHhccCc--ccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh
Confidence 6443322 3333311111 1256778899999999999999999999999866678899999999999999998
Q ss_pred -HHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 186 -THVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 186 -~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
.+++++|++.|+ +++.+|.+|+||||+|+..|+.++++
T Consensus 157 ~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~~~~~~ 195 (201)
T 3hra_A 157 YQDIVKLLMENGA----DQSIKDNSGRTAMDYANQKGYTEISK 195 (201)
T ss_dssp HHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHCCC----CCCccCCCCCCHHHHHHHcCCHhHHH
Confidence 999999999998 89999999999999999999977654
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.83 E-value=6.2e-21 Score=182.89 Aligned_cols=184 Identities=14% Similarity=0.040 Sum_probs=108.6
Q ss_pred CCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhh--HhHHHhhhhchh-----HHHHHHHHHhCCCCCCcccccCCCC
Q 042589 31 FPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGI--KNVREKKETHTW-----AIQVFDELVDDRNPHVYKYVYNGRE 103 (429)
Q Consensus 31 ~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i--~~i~~~k~~h~~-----a~~iv~~Ll~~~a~~~~~~d~~G~~ 103 (429)
..+++.||.+ |+++.++.+| +............+ .+.......|.. ..+++++|+++|+++| ..|.+|+|
T Consensus 12 ~~~L~~A~~~-G~~~~v~~LL-~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn-~~d~~G~T 88 (269)
T 4b93_B 12 VEKLLRAVAD-GDLEMVRYLL-EWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVN-VTSQDGSS 88 (269)
T ss_dssp HHHHHHHHHT-TCHHHHHHHH-TCC----------------------------------------CCCCTT-CCCTTSCC
T ss_pred hhHHHHHHHc-CCHHHHHHHH-HCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCC-CcCCCCCC
Confidence 4589999988 9999885544 11100000000000 000011111211 2357899999999999 45667999
Q ss_pred cccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHc
Q 042589 104 PRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIEN 183 (429)
Q Consensus 104 P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~ 183 (429)
|||.++..+..++ ++.|.+... +.+..+.+|.||+|+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+.+
T Consensus 89 pLh~A~~~g~~~~--v~~Ll~~~a---~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 89 PLHVAALHGRADL--IPLLLKHGA---NAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp HHHHHHHTTCTTH--HHHHHHTTC---CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHcCcHHH--HHHHHhcCC---CcCccCCCCCCccccccccChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHC
Confidence 9998876544333 333322111 1244566788888888888888888888877655 466777888888888888
Q ss_pred CCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 184 RQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 184 g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
|+.+++++|++.|+ ++|.+|.+|+||||+|+..|+.++++
T Consensus 163 g~~~~v~~Ll~~ga----dvn~~~~~g~t~Lh~A~~~g~~~~v~ 202 (269)
T 4b93_B 163 GHHELVALLLQHGA----SINASNNKGNTALHEAVIEKHVFVVE 202 (269)
T ss_dssp TCGGGHHHHHHTTC----CTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHCCC----CCCccccCCCcHHHHHHHcCCHHHHH
Confidence 88888888888777 77888888888888888888776665
No 5
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.82 E-value=1.1e-20 Score=164.38 Aligned_cols=136 Identities=16% Similarity=0.136 Sum_probs=111.5
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ .+..|.||+|.++..+.. +.++.+.+... ..+.+|..|+||||+|+..|+.+++++|+
T Consensus 15 ~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 87 (153)
T 1awc_B 15 DDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHF--STTEVLLRAGV---SRDARTKVDRTPLHMAASEGHANIVEVLL 87 (153)
T ss_dssp HHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCH--HHHHHHHTTTC---CTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCH--HHHHHHHHcCC---CCCCCCCCCCCHHHHHHHcChHHHHHHHH
Confidence 567788999999888 777899999988664432 22333332211 12556788999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++.+ ++.+|..|+||||+|+.+|+.+++++|++.|+ +++.+|.+|+||||+|+..|+.++++
T Consensus 88 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~~~i~~ 150 (153)
T 1awc_B 88 KHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGA----DVHTQSKFCKTAFDISIDNGNEDLAE 150 (153)
T ss_dssp TTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CccccCCCCCCHHHHHHHcCCHHHHH
Confidence 88666 47789999999999999999999999999998 89999999999999999999976654
No 6
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.81 E-value=2.9e-20 Score=162.64 Aligned_cols=137 Identities=15% Similarity=0.063 Sum_probs=111.6
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ ..+..|+||+|.+.. + ..+.++.+.+... ..+.+|..|.||||+|++.|+.++++.|+
T Consensus 18 ~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~-~--~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 90 (162)
T 1ihb_A 18 LEQLTSLLQNNVNVN-AQNGFGRTALQVMKL-G--NPEIARRLLLRGA---NPDLKDRTGFAVIHDAARAGFLDTLQTLL 90 (162)
T ss_dssp HHHHHHHTTSCCCTT-CCCTTSCCHHHHCCS-S--CHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHhCCCCcc-ccCccCccHHHHHHc-C--cHHHHHHHHHcCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 466789999999998 456679999998876 2 2333333332211 22557789999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++.+ ++.+|..|+||||+|+..|+.+++++|++.++. .++.+|.+|.||||+|+..|+.++++
T Consensus 91 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 91 EFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS---NVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC---CTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC---CCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 98765 577899999999999999999999999999882 47999999999999999999977664
No 7
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.81 E-value=1.3e-20 Score=177.88 Aligned_cols=138 Identities=17% Similarity=0.143 Sum_probs=72.2
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ ..+..|+||+|.++..+..+ .++.+.+....+ .+..+..|.||||+|+..|+.++++.|+
T Consensus 70 ~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~--~v~~Ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 144 (253)
T 1yyh_A 70 SDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQG--VFQILIRNRATD--LDARMHDGTTPLILAARLAVEGMLEDLI 144 (253)
T ss_dssp HHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHH--HHHHHHHSTTSC--TTCCCTTCCCHHHHHHHHTCSSHHHHHH
T ss_pred HHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHH--HHHHHHHcCCCC--ccccCCCCCcHHHHHHHcChHHHHHHHH
Confidence 455666666666665 23444666666554322211 122222111111 1334455666666666666666666666
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+.+.+ ++.+|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+..|+.++++
T Consensus 145 ~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpL~~A~~~~~~~~v~ 207 (253)
T 1yyh_A 145 NSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA----NKDMQNNREETPLFLAAREGSYETAK 207 (253)
T ss_dssp HTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence 55433 34455566666666666666666666666555 55556666666666666666555444
No 8
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.81 E-value=3.2e-20 Score=172.44 Aligned_cols=186 Identities=17% Similarity=0.052 Sum_probs=134.0
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhch----hHHHHHHHHHhCCCCCCcccccCCCCcc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHT----WAIQVFDELVDDRNPHVYKYVYNGREPR 105 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~----~a~~iv~~Ll~~~a~~~~~~d~~G~~P~ 105 (429)
...|++.+|.. |+.+.++.++ +.+. ..|.... ..+..+....|. ...+++++|+++|++++ ..+..|+||+
T Consensus 9 g~t~L~~A~~~-g~~~~v~~Ll-~~~~-~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l 83 (241)
T 1k1a_A 9 GDTPLHIAVVQ-GNLPAVHRLV-NLFQ-QGGRELD-IYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM-ALDRHGQTAA 83 (241)
T ss_dssp TCCHHHHHHHT-TCHHHHHHHH-HHHH-HTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHH
T ss_pred CCcHHHHHHHc-CCHHHHHHHH-HHHH-hcCCCCC-cccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHH
Confidence 45688888888 9998884443 2111 1111110 001111111221 13689999999999999 3566799999
Q ss_pred cccccCCccccccccCC-CCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCC-CCCCcHHHHHHHc
Q 042589 106 ISTFGQDVNAFTARETP-PDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLD-PGEKNVLLLAIEN 183 (429)
Q Consensus 106 ~~~~~~~~~~~~~i~ll-~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d-~~G~t~LH~A~~~ 183 (429)
|.++..+..+ .++.+ ..........+..|..|.||||+|+..|+.++++.|++.+.+. +..| ..|+||||+|+.+
T Consensus 84 ~~A~~~~~~~--~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 84 HLACEHRSPT--CLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp HHHHHTTCHH--HHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHT
T ss_pred HHHHHcCCHH--HHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHHHHc
Confidence 9887644332 23222 2222222234667889999999999999999999999987765 5556 7899999999999
Q ss_pred CCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 184 RQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 184 g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
|+.+++++|++.|. ++|.+|.+|+||||+|+..|+.++++
T Consensus 161 ~~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~v~ 200 (241)
T 1k1a_A 161 NSLSMVQLLLQHGA----NVNAQMYSGSSALHSASGRGLLPLVR 200 (241)
T ss_dssp TCHHHHHHHHHTTC----CTTCBCTTSCBHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999998 89999999999999999999987765
No 9
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.81 E-value=5.8e-20 Score=170.63 Aligned_cols=184 Identities=14% Similarity=-0.016 Sum_probs=133.2
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTF 109 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~ 109 (429)
...|++.+|.. |+.+.++.++ +...........+...+...... ...+++++|+++|++++ ..+..|.||+|.++
T Consensus 11 g~t~L~~A~~~-g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~ 85 (237)
T 3b7b_A 11 KRSPLHAAAEA-GHVDICHMLV-QAGANIDTCSEDQRTPLMEAAEN--NHLEAVKYLIKAGALVD-PKDAEGSTCLHLAA 85 (237)
T ss_dssp SCCHHHHHHHH-TCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHT--TCHHHHHHHHTTTCCCC-CCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHc-CcHHHHHHHH-HcCCCcCccCCCCCCHHHHHHHh--CCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHH
Confidence 45688888887 8888773332 21111111111111111111111 13689999999999998 35667999999887
Q ss_pred cCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHH
Q 042589 110 GQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVY 189 (429)
Q Consensus 110 ~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv 189 (429)
..+.. +.++.+.+....+ .+..+..|.||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+..|+.+++
T Consensus 86 ~~~~~--~~~~~Ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~ 160 (237)
T 3b7b_A 86 KKGHY--EVVQYLLSNGQMD--VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIA 160 (237)
T ss_dssp HTTCH--HHHHHHHTTTCCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHH
T ss_pred HcCCH--HHHHHHHhCCCCC--cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHH
Confidence 64433 2333333322111 255677899999999999999999999998766 477899999999999999999999
Q ss_pred HHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 190 NLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 190 ~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++|++.+. +++.+|.+|+||||+|+..|+.++++
T Consensus 161 ~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~v~ 194 (237)
T 3b7b_A 161 EILLAAKC----DLHAVNIHGDSPLHIAARENRYDCVV 194 (237)
T ss_dssp HHHHTTTC----CTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCC----CCCCcCCCCCCHHHHHHHhCCHhHHH
Confidence 99999998 89999999999999999999987765
No 10
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.80 E-value=8.4e-20 Score=168.32 Aligned_cols=183 Identities=13% Similarity=-0.035 Sum_probs=128.1
Q ss_pred CchHHHHHHhhhHHHHHHHHHHHHHHHHh-cCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcc--cccCCCCccccc
Q 042589 32 PSDYVKCFLKGIIDLVQEIELNVIWYAIY-AGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYK--YVYNGREPRIST 108 (429)
Q Consensus 32 ~~~y~~c~~~g~~~~~~~~l~~~~~~~~~-~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~--~d~~G~~P~~~~ 108 (429)
.|++.+|.. |+.+.++.++ +....... ....+...++-.... ...+++++|+++|++.+.. .+..|.||+|.+
T Consensus 4 t~L~~A~~~-g~~~~v~~Ll-~~~~~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 4 YPLHQACME-NEFFKVQELL-HSKPSLLLQKDQDGRIPLHWSVSF--QAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp CHHHHHHHT-TCHHHHHHHH-HHCGGGTTCCCTTSCCHHHHHHHT--TCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred cHHHHHHHh-CCHHHHHHHH-hcCccccccCCCCCCCHHHHHHHc--CCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 367777777 8888874443 11100000 111111111111111 1368999999999555422 344699999988
Q ss_pred ccCCccccccccCCCC-CCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHH
Q 042589 109 FGQDVNAFTARETPPD-PNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTH 187 (429)
Q Consensus 109 ~~~~~~~~~~i~ll~~-~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~ 187 (429)
+..+. .+.++.+.+ +...+ .+..+..|.||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+..|+.+
T Consensus 80 ~~~~~--~~~~~~Ll~~g~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 80 CSVGN--LEVVKSLYDRPLKPD--LNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HHHCC--HHHHHHHHSSSSCCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHcCC--HHHHHHHHhCCCCcc--cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHH
Confidence 76443 233333332 21122 256678899999999999999999999998655 5778999999999999999999
Q ss_pred HHHHHHcCC-CccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 188 VYNLLRSRE-ELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 188 iv~~Ll~~~-~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++++|++.+ . ++|.+|.+|+||||+|+..|+.++++
T Consensus 155 ~v~~Ll~~g~~----~~~~~d~~g~t~L~~A~~~~~~~~v~ 191 (228)
T 2dzn_A 155 LIELLCGLGKS----AVNWQDKQGWTPLFHALAEGHGDAAV 191 (228)
T ss_dssp HHHHHHTTTCC----CSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHhcCcc----cccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 999999998 5 89999999999999999999977665
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.80 E-value=9.3e-20 Score=171.96 Aligned_cols=183 Identities=13% Similarity=-0.006 Sum_probs=132.5
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCC-CCCcccccCCCCccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRN-PHVYKYVYNGREPRIST 108 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a-~~~~~~d~~G~~P~~~~ 108 (429)
...|++.+|.. |+.+.++.++ +...+.......+...++-.... ...+++++|+++++ +++ ..+..|.||+|.+
T Consensus 57 g~t~L~~A~~~-g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~-~~~~~g~t~L~~A 131 (253)
T 1yyh_A 57 GETALHLAARY-SRSDAAKRLL-EASADANIQDNMGRTPLHAAVSA--DAQGVFQILIRNRATDLD-ARMHDGTTPLILA 131 (253)
T ss_dssp SCCHHHHHHHT-TCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHH--TCHHHHHHHHHSTTSCTT-CCCTTCCCHHHHH
T ss_pred CCcHHHHHHHc-CCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHc--CCHHHHHHHHHcCCCCcc-ccCCCCCcHHHHH
Confidence 56788888887 8888773332 21111111111111111111111 13689999999998 777 3566799999988
Q ss_pred ccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHH
Q 042589 109 FGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHV 188 (429)
Q Consensus 109 ~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~i 188 (429)
+..+..+ .++.|.+... ..+.+|..|+||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+.+|+.++
T Consensus 132 ~~~~~~~--~v~~Ll~~g~---~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~ 205 (253)
T 1yyh_A 132 ARLAVEG--MLEDLINSHA---DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYET 205 (253)
T ss_dssp HHHTCSS--HHHHHHHTTC---CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHcChHH--HHHHHHHcCC---CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHH
Confidence 7644322 2333322211 1256778999999999999999999999998766 47789999999999999999999
Q ss_pred HHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 189 YNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 189 v~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++|++.|+ +++.+|..|+||||+|+..|+.+++.
T Consensus 206 v~~Ll~~ga----~~~~~d~~g~tpl~~A~~~g~~~i~~ 240 (253)
T 1yyh_A 206 AKVLLDHFA----NRDITDHMDRLPRDIAQERMHHDIVR 240 (253)
T ss_dssp HHHHHHTTC----CTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCC----CccccccCCCCHHHHHHHcCCHHHHH
Confidence 999999998 89999999999999999999977764
No 12
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.80 E-value=1.2e-19 Score=160.68 Aligned_cols=137 Identities=15% Similarity=0.054 Sum_probs=110.5
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|+++| ..|..|.||+|.++..+.. +.++.+.+... ..+..|..|.||||+|+..|+.+++++|+
T Consensus 27 ~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 100 (169)
T 2y1l_E 27 DDEVRILMANGADVN-AEDASGWTPLHLAAFNGHL--EIVEVLLKNGA---DVNAVDHAGMTPLRLAALFGHLEIVEVLL 100 (169)
T ss_dssp HHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCH--HHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCH--HHHHHHHHcCC---CCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 456688999999988 3556699999988764432 23333322211 12456788999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++.+ ++..|..|+||||+|+..|+.+++++|++.++ +++.+|.+|.||||+|+..|+.++++
T Consensus 101 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~l~~A~~~~~~~~~~ 163 (169)
T 2y1l_E 101 KNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA----DVNAQDKFGKTAFDISIDNGNEDLAE 163 (169)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHHhCCHHHHH
Confidence 98766 47789999999999999999999999999998 89999999999999999999976654
No 13
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.80 E-value=6.9e-20 Score=175.86 Aligned_cols=140 Identities=20% Similarity=0.152 Sum_probs=112.7
Q ss_pred HHHHHHHHHhCCC-CCCcccccCCCCcccccccC---CccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHH
Q 042589 79 AIQVFDELVDDRN-PHVYKYVYNGREPRISTFGQ---DVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEM 154 (429)
Q Consensus 79 a~~iv~~Ll~~~a-~~~~~~d~~G~~P~~~~~~~---~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~ei 154 (429)
..+++++|+++|+ +++ ..+..|.||+|.+... .....+.++.+.+.. ...+..+..|+||||+|+..|+.++
T Consensus 123 ~~~~v~~Ll~~g~~~~~-~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g---~~~~~~~~~g~tpLh~A~~~g~~~~ 198 (276)
T 4hbd_A 123 NFPVVQQLLDSGVCKVD-KQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG---NINAKASQAGQTALMLAVSHGRVDV 198 (276)
T ss_dssp CHHHHHHHHHTSCCCTT-CCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS---CTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHCCCCcCC-CCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC---CCccccCCCCCCHHHHHHHcCCHHH
Confidence 3689999999998 888 4566799999988642 122222232222211 1124566789999999999999999
Q ss_pred HHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHc-CCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 155 VKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRS-REELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 155 v~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~-~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
|+.|++.+.+ ++.+|.+|+||||+|+..|+.+++++|++ .|+ ++|.+|.+|+||||+|+..|+.++++
T Consensus 199 v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ga----d~~~~d~~g~TpL~~A~~~g~~~iv~ 267 (276)
T 4hbd_A 199 VKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSC----DISLTDRDGSTALMVALDAGQSEIAS 267 (276)
T ss_dssp HHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTC----CTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC----CCcCcCCCCCCHHHHHHHcCCHHHHH
Confidence 9999998766 57889999999999999999999999999 777 89999999999999999999977664
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.80 E-value=1.2e-19 Score=167.70 Aligned_cols=181 Identities=14% Similarity=0.006 Sum_probs=129.1
Q ss_pred chHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccccCC
Q 042589 33 SDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTFGQD 112 (429)
Q Consensus 33 ~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~ 112 (429)
|++.+|.. |+++.+++++.+.-.........+...++..... ...+++++|+++|++++ ..|..|+||+|.++..+
T Consensus 9 ~l~~A~~~-g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 9 MICNLAYS-GKLDELKERILADKSLATRTDQDSRTALHWACSA--GHTEIVEFLLQLGVPVN-DKDDAGWSPLHIAASAG 84 (231)
T ss_dssp HHHHHHHH-TCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHH--TCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHT
T ss_pred hHHHHHHh-CCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHc--CcHHHHHHHHHhCCCCC-CcCCCCCCHHHHHHHcC
Confidence 56777776 8898885544211000010111111111111111 13689999999999998 45667999999887644
Q ss_pred ccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHH
Q 042589 113 VNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLL 192 (429)
Q Consensus 113 ~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~L 192 (429)
..+ .++.+.+... ..+.+|..|.||||+|+..|+.+++++|++++.+ .+..|..|+||||+|+..|+.+++++|
T Consensus 85 ~~~--~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 85 XDE--IVKALLVKGA---HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp CHH--HHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHH--HHHHHHHcCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 332 2333322211 1255678899999999999999999999988665 467889999999999999999999999
Q ss_pred HcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 193 RSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 193 l~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++.+. +++.+|.+|+||||+|+..|+.++++
T Consensus 159 l~~g~----~~~~~~~~g~t~L~~A~~~~~~~~v~ 189 (231)
T 3aji_A 159 LFYKA----STNIQDTEGNTPLHLACDEERVEEAK 189 (231)
T ss_dssp HHTTC----CSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HhcCC----CccccCCCCCCHHHHHHHCCCHHHHH
Confidence 99988 89999999999999999999987766
No 15
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.80 E-value=3.9e-20 Score=177.28 Aligned_cols=131 Identities=14% Similarity=0.071 Sum_probs=109.5
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCC-CCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPP-DPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 158 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~-~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~L 158 (429)
.+++++|+++|++++ ..+.+|.||++.+.......+ ++.|. .+.+ .+.+|..|+||||+||+.|+.++|++|
T Consensus 99 ~~~v~~Ll~~~a~~~-~~~~~g~t~l~~a~~~~~~~~--~~~Ll~~g~~----~n~~d~~g~TpL~~A~~~g~~~~v~~L 171 (269)
T 4b93_B 99 ADLIPLLLKHGANAG-ARNADQAVPLHLACQQGHFQV--VKCLLDSNAK----PNKKDLSGNTPLIYACSGGHHELVALL 171 (269)
T ss_dssp TTHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTCHHH--HHHHHHTTCC----SCCCCTTCCCHHHHHHHTTCGGGHHHH
T ss_pred HHHHHHHHhcCCCcC-ccCCCCCCccccccccChHHH--HHHHHHCCCC----CCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 578999999999999 455669999998866443332 22232 2222 256788999999999999999999999
Q ss_pred HHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCC
Q 042589 159 LDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGD 222 (429)
Q Consensus 159 l~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~ 222 (429)
++++.+ ++.+|..|+||||+|+.+|+.++|++|++.|+ ++|.+|.+|+||||+|++.|+
T Consensus 172 l~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga----d~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 172 LQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHGA----SVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC----CSCCCCTTSCCSGGGSCTTCH
T ss_pred HHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCC----CCCCcCCCCCCHHHHHHhCCc
Confidence 998766 57889999999999999999999999999998 899999999999999988765
No 16
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.79 E-value=8.7e-20 Score=164.62 Aligned_cols=136 Identities=15% Similarity=0.127 Sum_probs=106.0
Q ss_pred HHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 042589 81 QVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILD 160 (429)
Q Consensus 81 ~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~ 160 (429)
+++++|+++|++++ ..+..|+||+|.++..+..+ .++.+.+... ..+..|..|.||||+|+..|+.+++++|++
T Consensus 49 ~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~--~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (192)
T 2rfm_A 49 NAIDKLVENFDKLE-DKDIEGSTALIWAVKNNRLG--IAEKLLSKGS---NVNTKDFSGKTPLMWSIIFGYSEMSYFLLE 122 (192)
T ss_dssp GGHHHHHHHHCCTT-CCCTTSCCHHHHHHHTTCHH--HHHHHHHHTC---CTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHhccccc-cccccCccHHHHHHHcCCHH--HHHHHHHCCC---CCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 45577777777777 34555888888776533322 2222221111 124567789999999999999999999998
Q ss_pred hCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 161 TFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 161 ~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++.+ ++.+|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|.||||+|+..|+.++++
T Consensus 123 ~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 123 HGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGA----DISARDLTGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp TTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC----CTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred CCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCcCCCCCCHHHHHHHhCcHHHHH
Confidence 8766 47789999999999999999999999999998 89999999999999999999976654
No 17
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.79 E-value=6.1e-20 Score=170.09 Aligned_cols=91 Identities=23% Similarity=0.225 Sum_probs=59.7
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHH----HHHHcCCCccc--cccccccCC
Q 042589 136 SRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVY----NLLRSREELGE--TIFWQVDNL 209 (429)
Q Consensus 136 d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv----~~Ll~~~~~~~--~~in~~D~~ 209 (429)
|..|.||||+|+..|+.++++.|++++.+ ++.+|..|+||||+|+.+|+.+++ ++|++.++... ...+.+|.+
T Consensus 118 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~ 196 (232)
T 2rfa_A 118 IYYGEHPLSFAACVGSEEIVRLLIEHGAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQ 196 (232)
T ss_dssp CCCCSSHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTT
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCC
Confidence 44677777777777777777777766544 356677777777777777777766 77777665100 011567777
Q ss_pred CCcHHHHHHHcCCCcccc
Q 042589 210 GNSALHLAATYGDHRPWH 227 (429)
Q Consensus 210 G~TpLHlAa~~g~~~~~~ 227 (429)
|+||||+|+..|+.++++
T Consensus 197 g~tpl~~A~~~g~~~~v~ 214 (232)
T 2rfa_A 197 GLTPFKLAGVEGNIVMFQ 214 (232)
T ss_dssp SCCHHHHHHHHTCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHH
Confidence 777777777777755543
No 18
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.79 E-value=4.3e-19 Score=154.29 Aligned_cols=134 Identities=15% Similarity=0.087 Sum_probs=102.2
Q ss_pred HHHHHHHHhC-CCCCCcccccCCCCcccccccCCccccccccCCC-CCCCcccccccCCCCCCcHHHHHHHcCcHHHHHH
Q 042589 80 IQVFDELVDD-RNPHVYKYVYNGREPRISTFGQDVNAFTARETPP-DPNTYKKKNARRSRRKETPILVAAKMGVTEMVKK 157 (429)
Q Consensus 80 ~~iv~~Ll~~-~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~-~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~ 157 (429)
.+++++|+++ +.+++ ..+..|.||+|. +..+. .+.++.+. .+.+ .+.+|..|.||||+|+..|+.++++.
T Consensus 15 ~~~v~~ll~~~~~~~~-~~~~~g~t~L~~-~~~~~--~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~ 86 (156)
T 1bd8_A 15 VQEVRRLLHRELVHPD-ALNRFGKTALQV-MMFGS--TAIALELLKQGAS----PNVQDTSGTSPVHDAARTGFLDTLKV 86 (156)
T ss_dssp HHHHHHHHHTTCCCTT-CCCTTSCCHHHH-SCTTC--HHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhhCcCcc-ccCCCCCcHHHH-HHcCC--HHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 3455677776 22555 244557788777 33222 22222222 2221 24567789999999999999999999
Q ss_pred HHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 158 ILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 158 Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
|++++.+ ++.+|..|+||||+|+.+|+.+++++|++. + +++.+|.+|+||||+|+..|+.++++
T Consensus 87 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~----~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 87 LVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S----DLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp HHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S----CTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred HHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c----CCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9998765 577899999999999999999999999988 6 89999999999999999999977654
No 19
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.78 E-value=1.1e-19 Score=167.99 Aligned_cols=181 Identities=12% Similarity=-0.011 Sum_probs=130.3
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTF 109 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~ 109 (429)
...|++.+|.. |+.+.++.++ +...........+...++-.... ...+++++|+++|++++ ..+..|.||+|.++
T Consensus 40 g~t~L~~A~~~-g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~ 114 (231)
T 3aji_A 40 SRTALHWACSA-GHTEIVEFLL-QLGVPVNDKDDAGWSPLHIAASA--GXDEIVKALLVKGAHVN-AVNQNGCTPLHYAA 114 (231)
T ss_dssp SCCHHHHHHHH-TCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHH--TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHc-CcHHHHHHHH-HhCCCCCCcCCCCCCHHHHHHHc--CHHHHHHHHHHcCCCCC-CCCCCCCCHHHHHH
Confidence 56688888887 8888773332 11111111111111111111111 13689999999999999 45667999999887
Q ss_pred cCCccccccccCCC-CCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHH
Q 042589 110 GQDVNAFTARETPP-DPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHV 188 (429)
Q Consensus 110 ~~~~~~~~~i~ll~-~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~i 188 (429)
..+..+ .++.+. .+.+ .+..|..|.||||+|+..|+.++++.|++.+.+ .+.+|..|+||||+|+..|+.++
T Consensus 115 ~~~~~~--~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~ 187 (231)
T 3aji_A 115 SKNRHE--IAVMLLEGGAN----PDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEE 187 (231)
T ss_dssp HTTCHH--HHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HcCCHH--HHHHHHHcCCC----CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHH
Confidence 644332 233332 2222 255678899999999999999999999988665 47789999999999999999999
Q ss_pred HHHHHcCCCccccccccccCCCCcHHHHHHHcCCCccc
Q 042589 189 YNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPW 226 (429)
Q Consensus 189 v~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~ 226 (429)
+++|++.|+ +++.+|.+|.||||+|+..++.++.
T Consensus 188 v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~~~i~ 221 (231)
T 3aji_A 188 AKFLVTQGA----SIYIENKEEKTPLQVAKGGLGLILK 221 (231)
T ss_dssp HHHHHHTTC----CSCCCCTTSCCHHHHSCHHHHHHHH
T ss_pred HHHHHHCCC----CCCCCCCCCCCHHHHHHhhHHHHHH
Confidence 999999998 8999999999999999887775543
No 20
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.78 E-value=8.8e-20 Score=180.99 Aligned_cols=92 Identities=18% Similarity=0.154 Sum_probs=49.0
Q ss_pred CCCCCCcHHHHHHHcC--cHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCc-cccccccccCCCC
Q 042589 135 RSRRKETPILVAAKMG--VTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREEL-GETIFWQVDNLGN 211 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G--~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~-~~~~in~~D~~G~ 211 (429)
.|..|.||||+|+..| +.+++++|++++.+ ++..|..|+||||+|+.+|+.+++++|++.++. ...++|.+|.+|+
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 4445555555555555 55555555555433 344555555555555555555555555555441 0111555555555
Q ss_pred cHHHHHHHcCCCcccc
Q 042589 212 SALHLAATYGDHRPWH 227 (429)
Q Consensus 212 TpLHlAa~~g~~~~~~ 227 (429)
||||+|+..|+.++++
T Consensus 213 t~L~~A~~~g~~~~v~ 228 (364)
T 3ljn_A 213 SHLHWAILINWEDVAM 228 (364)
T ss_dssp CTTHHHHTTTCHHHHH
T ss_pred cHHHHHHHcCCHHHHH
Confidence 5555555555555444
No 21
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.78 E-value=2.9e-19 Score=157.37 Aligned_cols=137 Identities=15% Similarity=0.123 Sum_probs=107.4
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|++++++++ ..|..|.||+|.++..+.. +.++.+.+... ..+..|..|.||||+|+..|+.+++++|+
T Consensus 16 ~~~v~~ll~~~~~~~-~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (167)
T 3v31_A 16 MLYLATRIEQENVIN-HTDEEGFTPLMWAAAHGQI--AVVEFLLQNGA---DPQLLGKGRESALSLACSKGYTDIVKMLL 89 (167)
T ss_dssp HHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTCH--HHHHHHHHTTC---CTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcC-CCCCCCCCHHHHHHHCCCH--HHHHHHHHcCC---CCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 345577788888777 3555688888877654332 22333322111 12456778999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++.+ ++..|..|+||||+|+..|+.+++++|++.++ +++.+|.+|.||||+|+..|+.++++
T Consensus 90 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 90 DCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA----DPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 98766 47789999999999999999999999999988 89999999999999999999966553
No 22
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.78 E-value=3.8e-19 Score=163.53 Aligned_cols=182 Identities=13% Similarity=-0.013 Sum_probs=117.8
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCC-CCCcccccCCCCccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRN-PHVYKYVYNGREPRIST 108 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a-~~~~~~d~~G~~P~~~~ 108 (429)
...|++.+|.. |+.+.++.++ +...........+...++..... ...+++++|+++++ +++ ..+..|.||+|.+
T Consensus 25 g~t~L~~A~~~-g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~-~~~~~g~t~L~~A 99 (223)
T 2f8y_A 25 GETALHLAARY-SRSDAAKRLL-EASADANIQDNMGRTPLHAAVSA--DAQGVFQILIRNRATDLD-ARMHDGTTPLILA 99 (223)
T ss_dssp CCCHHHHHHHT-TCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHT--TCHHHHHHHHHBTTSCTT-CCCTTCCCHHHHH
T ss_pred CCchHHHHHHc-CCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHc--CCHHHHHHHHHcCCCCcc-cCCCCCCcHHHHH
Confidence 45688888877 8888773332 11111110111111111111111 13578888888877 666 3455688888877
Q ss_pred ccCCccccccccCCCC-CCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHH
Q 042589 109 FGQDVNAFTARETPPD-PNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTH 187 (429)
Q Consensus 109 ~~~~~~~~~~i~ll~~-~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~ 187 (429)
...+..+ .++.+.+ +.+ .+..|..|.||||+|+..|+.+++++|++++.+ .+.+|..|+||||+|+.+|+.+
T Consensus 100 ~~~~~~~--~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~ 172 (223)
T 2f8y_A 100 ARLAVEG--MLEDLINSHAD----VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYE 172 (223)
T ss_dssp HHHTCHH--HHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHhCcHH--HHHHHHHcCCC----CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHH
Confidence 6533322 2222222 211 245667788888888888888888888887655 4667888888888888888888
Q ss_pred HHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 188 VYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 188 iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++++|++.++ +++.+|.+|.||||+|+..|+.++++
T Consensus 173 ~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~~~i~~ 208 (223)
T 2f8y_A 173 TAKVLLDHFA----NRDITDHMDRLPRDIAQERMHHDIVR 208 (223)
T ss_dssp HHHHHHHTTC----CTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHcCC----CCccccccCCCHHHHHHHhcchHHHH
Confidence 8888888887 78888888888888888888866654
No 23
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.78 E-value=1.3e-19 Score=171.81 Aligned_cols=134 Identities=16% Similarity=0.033 Sum_probs=84.8
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCC-CCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPP-DPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 158 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~-~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~L 158 (429)
.+++++|+++|++++ ..|..|+||+|.++..+..+ .++.+. .+.+.. .+.+|.||||+|+..|+.++++.|
T Consensus 49 ~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~-----~~~~g~t~L~~A~~~~~~~~v~~L 120 (261)
T 2xai_A 49 LSCVKILLKHGAQVN-GVTADWHTPLFNACVSGSWD--CVNLLLQHGASVQ-----PESDLASPIHEAARRGHVECVNSL 120 (261)
T ss_dssp HHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHH--HHHHHHHTTCCSS-----CSCTTCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHH--HHHHHHHCCCCCC-----CCCCCCCHHHHHHHcCcHHHHHHH
Confidence 467777777777777 34555777777665533222 222222 222111 233477777777777777777777
Q ss_pred HHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 159 LDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 159 l~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++.+.+ ++..|..|+||||+|+.+|+.+++++|++.++ ++|. |.+|+||||+|+..|+.++++
T Consensus 121 l~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~-~~~g~t~Lh~A~~~~~~~~v~ 183 (261)
T 2xai_A 121 IAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGA----DVNQ-GKGQDSPLHAVARTASEELAC 183 (261)
T ss_dssp HHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC----CTTC-CBTTBCHHHHHHHHTCHHHHH
T ss_pred HHcCCC-CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC----CCCC-CCCCCChHHHHHHcCCHHHHH
Confidence 766554 35567777777777777777777777777766 5553 667777777777777766554
No 24
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.78 E-value=2.4e-19 Score=176.24 Aligned_cols=132 Identities=11% Similarity=0.027 Sum_probs=105.5
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCc----cccccccCCCCCCCcccccccCCCCCCcHHHHHHH----cCc
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDV----NAFTARETPPDPNTYKKKNARRSRRKETPILVAAK----MGV 151 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~----~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~----~G~ 151 (429)
.+++++|+++|+++| ..|..|+||+|.++..+. ..+. .+++... .+.+.+|..|+||||+|++ .|+
T Consensus 144 ~~~v~~Ll~~Gad~n-~~d~~g~TpLh~A~~~g~~~~~~~~~--~ll~~~~---~~~~~~d~~g~tpLh~A~~~~~~~g~ 217 (327)
T 1sw6_A 144 LELVKHLVKHGSNRL-YGDNMGESCLVKAVKSVNNYDSGTFE--ALLDYLY---PCLILEDSMNRTILHHIIITSGMTGC 217 (327)
T ss_dssp HHHHHHHHHTTCCTT-BCCTTCCCHHHHHHHSSHHHHTTCHH--HHHHHHG---GGGGEECTTCCCHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhcccccHHHHH--HHHHhhh---ccccCCCCCCCCHHHHHHHHcccccc
Confidence 689999999999999 466679999999876543 2211 1111110 1236778899999999999 999
Q ss_pred HHHHHHHHHhCCC--------------------------------------------ccccCCCCCCcHHHHHHHcCCHH
Q 042589 152 TEMVKKILDTFPV--------------------------------------------AIWDLDPGEKNVLLLAIENRQTH 187 (429)
Q Consensus 152 ~eiv~~Ll~~~~~--------------------------------------------~~~~~d~~G~t~LH~A~~~g~~~ 187 (429)
.++++.|++.... .++.+|..|+||||+|+.+|+.+
T Consensus 218 ~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~ 297 (327)
T 1sw6_A 218 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNIS 297 (327)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHH
Confidence 9999999876310 15678999999999999999999
Q ss_pred HHHHHHcCCCccccccccccCCCCcHHHHHHHcC
Q 042589 188 VYNLLRSREELGETIFWQVDNLGNSALHLAATYG 221 (429)
Q Consensus 188 iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g 221 (429)
++++|++.|+ +++.+|.+|+||||+|++.|
T Consensus 298 ~v~~Ll~~Ga----d~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 298 IVDALLDYGA----DPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHHTTC----CTTCCCTTSCCGGGGTCC--
T ss_pred HHHHHHHcCC----CCcccCCCCCCHHHHHHhcC
Confidence 9999999998 89999999999999998765
No 25
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.78 E-value=2.3e-19 Score=170.13 Aligned_cols=176 Identities=10% Similarity=-0.031 Sum_probs=128.1
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTF 109 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~ 109 (429)
...|++.+|.. |+.+.++.++ +...+.......+...++..... ...+++++|+++|++++ .+++|.||+|.++
T Consensus 36 g~t~L~~A~~~-g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~ 109 (261)
T 2xai_A 36 HVSPLHEACLG-GHLSCVKILL-KHGAQVNGVTADWHTPLFNACVS--GSWDCVNLLLQHGASVQ--PESDLASPIHEAA 109 (261)
T ss_dssp CCCHHHHHHHH-TCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHH--TCHHHHHHHHHTTCCSS--CSCTTCCHHHHHH
T ss_pred CCCHHHHHHHc-CCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHc--CCHHHHHHHHHCCCCCC--CCCCCCCHHHHHH
Confidence 45688888887 8888773332 22111111111111111111111 14689999999999999 7888999999887
Q ss_pred cCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHH
Q 042589 110 GQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVY 189 (429)
Q Consensus 110 ~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv 189 (429)
..+..+ .++.+.+... ..+..|..|.||||+|+..|+.++++.|++++.+. + .|..|+||||+|+..|+.+++
T Consensus 110 ~~~~~~--~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~Lh~A~~~~~~~~v 182 (261)
T 2xai_A 110 RRGHVE--CVNSLIAYGG---NIDHKISHLGTPLYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVARTASEELA 182 (261)
T ss_dssp HTTCHH--HHHHHHHTTC---CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT-T-CCBTTBCHHHHHHHHTCHHHH
T ss_pred HcCcHH--HHHHHHHcCC---CCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-C-CCCCCCChHHHHHHcCCHHHH
Confidence 644332 2333332211 22567789999999999999999999999998765 3 488999999999999999999
Q ss_pred HHHHcCCCccccccccccCCCCcHHHHHHHcCC
Q 042589 190 NLLRSREELGETIFWQVDNLGNSALHLAATYGD 222 (429)
Q Consensus 190 ~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~ 222 (429)
++|++.|+ +++.+|.+|+||||+|+..++
T Consensus 183 ~~Ll~~ga----d~~~~d~~g~tpl~~A~~~~~ 211 (261)
T 2xai_A 183 CLLMDFGA----DTQAKNAEGKRPVELVPPESP 211 (261)
T ss_dssp HHHHHTTC----CTTCCCTTSCCGGGGSCTTCT
T ss_pred HHHHHcCC----CCCCcCCCCCChhhhcccccc
Confidence 99999998 899999999999999996554
No 26
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.78 E-value=1.2e-19 Score=181.65 Aligned_cols=190 Identities=11% Similarity=0.034 Sum_probs=133.6
Q ss_pred CCCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCC---CCCCcccccCCCCcc
Q 042589 29 QLFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDR---NPHVYKYVYNGREPR 105 (429)
Q Consensus 29 ~~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~---a~~~~~~d~~G~~P~ 105 (429)
....|++.+|.. |+.++++.++ +...+..-....+...++-.... ...+++++|++++ ++++ ..|..|.||+
T Consensus 165 ~g~TpL~~A~~~-g~~~iv~~Ll-~~ga~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~-~~d~~g~t~L 239 (373)
T 2fo1_E 165 DENTPLMLAVLA-RRRRLVAYLM-KAGADPTIYNKSERSALHQAAAN--RDFGMMVYMLNSTKLKGDIE-ELDRNGMTAL 239 (373)
T ss_dssp TSCCHHHHHHHH-TCHHHHHHHH-HTTCCSCCCCTTCCCHHHHHHHT--TCHHHHHHHTTSHHHHHTTS-CCCTTSCCHH
T ss_pred CCCCHHHHHHHc-ChHHHHHHHH-HCCCCCcccCCCCCCHHHHHHHC--CCHHHHHHHHhcCccccChh-hcCCCCCCHH
Confidence 356788888888 8888773322 21111110111111111111111 1368999999998 7888 4566799999
Q ss_pred cccccCC-ccccccccCCCC-CCCccc----ccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHH
Q 042589 106 ISTFGQD-VNAFTARETPPD-PNTYKK----KNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLL 179 (429)
Q Consensus 106 ~~~~~~~-~~~~~~i~ll~~-~~~~~~----~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~ 179 (429)
|.++..+ ....+.++.|.+ +.+... ..+..|..|+||||+|+..|+.++|++|+++++..++.+|..|+||||+
T Consensus 240 ~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~ 319 (373)
T 2fo1_E 240 MIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIML 319 (373)
T ss_dssp HHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHH
T ss_pred HHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHH
Confidence 9876533 123333333322 222111 1234677899999999999999999999998766678899999999999
Q ss_pred HHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 180 AIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 180 A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
|+.+|+.+++++|++.|+ +++.+|.+|+||||+|+..|+.++++
T Consensus 320 A~~~g~~~iv~~Ll~~ga----d~~~~d~~g~t~l~~A~~~g~~~iv~ 363 (373)
T 2fo1_E 320 AAQEGRIEVVMYLIQQGA----SVEAVDATDHTARQLAQANNHHNIVD 363 (373)
T ss_dssp HHHHTCHHHHHHHHHTTC----CSSCCCSSSCCHHHHHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCC----CccCCCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999998 89999999999999999999977765
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.77 E-value=2.8e-19 Score=165.65 Aligned_cols=139 Identities=14% Similarity=0.012 Sum_probs=109.6
Q ss_pred HHHHHHHHhC-CCCCCcccccCCCCcccccccCCccccccccCCCC-CCC-cccccccCCCCCCcHHHHHHHcCcHHHHH
Q 042589 80 IQVFDELVDD-RNPHVYKYVYNGREPRISTFGQDVNAFTARETPPD-PNT-YKKKNARRSRRKETPILVAAKMGVTEMVK 156 (429)
Q Consensus 80 ~~iv~~Ll~~-~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~-~~~-~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~ 156 (429)
.+++++|+++ |++++ ..|..|+||+|.++..+..+ .++.|.+ +.. .....+..|.+|+||||+|+..|+.++++
T Consensus 16 ~~~v~~Ll~~~g~~~~-~~~~~g~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 92 (232)
T 2rfa_A 16 VQALSKLLKFEGCEVH-QRGAMGETALHIAALYDNLE--AAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVR 92 (232)
T ss_dssp HHHHHHHHTTTCSCTT-CCCTTSCCHHHHHHHTTCHH--HHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhcCCCcc-cCCCCCCCHHHHHHHcCCHH--HHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHH
Confidence 4567888987 99998 45667999999887644332 2333322 211 11222556779999999999999999999
Q ss_pred HHHHhCCCccccCCC-------------CCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCC
Q 042589 157 KILDTFPVAIWDLDP-------------GEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDH 223 (429)
Q Consensus 157 ~Ll~~~~~~~~~~d~-------------~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~ 223 (429)
+|++++.+. +..+. .|+||||+|+..|+.+++++|++.|+ ++|.+|.+|+||||+|+..|+.
T Consensus 93 ~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~t~L~~A~~~~~~ 167 (232)
T 2rfa_A 93 ALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA----DIRAQDSLGNTVLHILILQPNK 167 (232)
T ss_dssp HHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHTCSCH
T ss_pred HHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCCCCCCCCHHHHHHHcCCh
Confidence 999987654 44443 79999999999999999999999998 8999999999999999999997
Q ss_pred ccc
Q 042589 224 RPW 226 (429)
Q Consensus 224 ~~~ 226 (429)
+++
T Consensus 168 ~~~ 170 (232)
T 2rfa_A 168 TFA 170 (232)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 28
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.77 E-value=1.1e-18 Score=154.46 Aligned_cols=136 Identities=16% Similarity=0.099 Sum_probs=100.3
Q ss_pred HHHHHHHhCCCC-CCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 81 QVFDELVDDRNP-HVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 81 ~iv~~Ll~~~a~-~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
++++.|++++.+ ++ ..|..|+||+|.++..+..+ .++.+.+... ..+..|..|+||||+|+..|+.++++.|+
T Consensus 16 ~~v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~--~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (172)
T 3v30_A 16 DQLKEHLRKGDNLVN-KPDERGFTPLIWASAFGEIE--TVRFLLEWGA---DPHILAKERESALSLASTGGYTDIVGLLL 89 (172)
T ss_dssp HHHHHHHTTCSGGGG-CCCTTSCCHHHHHHHTTCHH--HHHHHHHHTC---CTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCccccc-CCCCCCCCHHHHHHHcCCHH--HHHHHHHcCC---CchhhcccCCCHHHHHHHCCCHHHHHHHH
Confidence 344566666554 34 23445666666555433221 1222221110 11345678999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++.+ ++.+|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+..|+.++++
T Consensus 90 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 90 ERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGA----DLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp TTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CccccCCCCCCHHHHHHHhCcHHHHH
Confidence 88665 57789999999999999999999999999998 89999999999999999999866654
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.77 E-value=4.5e-19 Score=163.04 Aligned_cols=138 Identities=17% Similarity=0.143 Sum_probs=110.2
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ ..+..|+||+|.++..+..+ .++.+.+.... ..+..+..|.||||+|+..|+.++++.|+
T Consensus 38 ~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~--~v~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 112 (223)
T 2f8y_A 38 SDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQG--VFQILIRNRAT--DLDARMHDGTTPLILAARLAVEGMLEDLI 112 (223)
T ss_dssp HHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHH--HHHHHHHBTTS--CTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHH--HHHHHHHcCCC--CcccCCCCCCcHHHHHHHhCcHHHHHHHH
Confidence 688999999999998 45667999999887644332 23333222111 12456778999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++.+ ++..|..|+||||+|+..|+.+++++|++.++ +++.+|.+|+||||+|+..|+.++++
T Consensus 113 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~v~ 175 (223)
T 2f8y_A 113 NSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA----NKDMQNNREETPLFLAAREGSYETAK 175 (223)
T ss_dssp HTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCcCHHHHHHHcCCHHHHH
Confidence 87665 46788999999999999999999999999987 88999999999999999999977765
No 30
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.77 E-value=3.7e-19 Score=165.62 Aligned_cols=140 Identities=15% Similarity=0.074 Sum_probs=112.3
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCC-CCCc--ccccccCCCCCCcHHHHHHHcCcHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPD-PNTY--KKKNARRSRRKETPILVAAKMGVTEMVK 156 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~-~~~~--~~~~~~~d~~G~TpLh~Aa~~G~~eiv~ 156 (429)
.+++++|+++|++++ ..+..|+||+|.++..+..+ .++.+.+ +... ....+..+..|.||||+|+..|+.++++
T Consensus 58 ~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~--~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 134 (236)
T 1ikn_D 58 PEIAEALLGAGCDPE-LRDFRGNTPLHLACEQGCLA--SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVE 134 (236)
T ss_dssp HHHHHCCCSCCCCSC-CCCTTCCCHHHHHHHHTCHH--HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHH--HHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHH
Confidence 578899999999999 45667999999887644322 2322222 2211 1123567788999999999999999999
Q ss_pred HHHHhCCCccccCCC-CCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 157 KILDTFPVAIWDLDP-GEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 157 ~Ll~~~~~~~~~~d~-~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+|++++.+. +.+|. .|+||||+|+..|+.+++++|++.|+ +++.+|.+|.||||+|+..|+.++++
T Consensus 135 ~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~A~~~~~~~~~~ 201 (236)
T 1ikn_D 135 LLVSLGADV-NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA----DVNRVTYQGYSPYQLTWGRPSTRIQQ 201 (236)
T ss_dssp HHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTC----CSCCCCTTCCCGGGGCTTSSCHHHHH
T ss_pred HHHHcCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCcccCCCCCHHHHHHccCchHHHH
Confidence 999987664 66776 99999999999999999999999998 89999999999999999999977765
No 31
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.76 E-value=2.2e-19 Score=169.25 Aligned_cols=136 Identities=13% Similarity=0.037 Sum_probs=103.2
Q ss_pred HHHHHHHhCCCCCCc---ccccCCCCcccccccC-CccccccccCCCCC-CCc-------ccccccCCCCCCcHHHHHHH
Q 042589 81 QVFDELVDDRNPHVY---KYVYNGREPRISTFGQ-DVNAFTARETPPDP-NTY-------KKKNARRSRRKETPILVAAK 148 (429)
Q Consensus 81 ~iv~~Ll~~~a~~~~---~~d~~G~~P~~~~~~~-~~~~~~~i~ll~~~-~~~-------~~~~~~~d~~G~TpLh~Aa~ 148 (429)
.++++|+++|++++. ..|..|+||+|.++.. .....+.++.|.+. ... .......|..|.||||+|+.
T Consensus 20 ~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~ 99 (256)
T 2etb_A 20 GLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIE 99 (256)
T ss_dssp THHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHH
T ss_pred HHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHH
Confidence 467889999999992 1477799999988764 11222233333221 110 00012245679999999999
Q ss_pred cCcHHHHHHHHHhCCCccccCCCC-------------CCcHHHHHHHcCCHHHHHHHHc---CCCccccccccccCCCCc
Q 042589 149 MGVTEMVKKILDTFPVAIWDLDPG-------------EKNVLLLAIENRQTHVYNLLRS---REELGETIFWQVDNLGNS 212 (429)
Q Consensus 149 ~G~~eiv~~Ll~~~~~~~~~~d~~-------------G~t~LH~A~~~g~~~iv~~Ll~---~~~~~~~~in~~D~~G~T 212 (429)
.|+.++++.|++++.+ ++..|.. |+||||+|+..|+.+++++|++ .|+ ++|.+|.+|+|
T Consensus 100 ~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga----~~n~~d~~g~T 174 (256)
T 2etb_A 100 KRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA----SLEATDSLGNT 174 (256)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC----CTTCCCTTSCC
T ss_pred cCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC----CcCccCCCCCC
Confidence 9999999999998766 4666665 9999999999999999999999 787 89999999999
Q ss_pred HHHHHHHcC
Q 042589 213 ALHLAATYG 221 (429)
Q Consensus 213 pLHlAa~~g 221 (429)
|||+|+..+
T Consensus 175 pLh~A~~~~ 183 (256)
T 2etb_A 175 VLHALVMIA 183 (256)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHcc
Confidence 999999943
No 32
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.76 E-value=2.3e-18 Score=146.94 Aligned_cols=104 Identities=16% Similarity=0.121 Sum_probs=93.1
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ ..|..|+||||+|+..|+.++++.|+
T Consensus 27 ~~~v~~Ll~~g~~~~---------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll 67 (136)
T 2jab_A 27 DDEVRILMANGADVN---------------------------------------AKDEYGLTPLYLATAHGHLEIVEVLL 67 (136)
T ss_dssp HHHHHHHHHTTCCTT---------------------------------------CCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC---------------------------------------CcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 456689999999887 24567999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++.+ ++..|..|+||||+|+..|+.+++++|++.++ +++.+|.+|+||||+|+..|+.++++
T Consensus 68 ~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~tpl~~A~~~~~~~~~~ 130 (136)
T 2jab_A 68 KNGAD-VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGA----DVNAQDKFGKTAFDISIGNGNEDLAE 130 (136)
T ss_dssp HTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCcCcCCCCCCHHHHHHHCCCHHHHH
Confidence 98665 57789999999999999999999999999998 89999999999999999999976654
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.76 E-value=7.2e-19 Score=162.04 Aligned_cols=177 Identities=13% Similarity=-0.007 Sum_probs=126.7
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHH--HHHHh-cCchhhHhHHHhhhhchhHHHHHHHHHhCC--CCCCcccccCCCCc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVI--WYAIY-AGIRGIKNVREKKETHTWAIQVFDELVDDR--NPHVYKYVYNGREP 104 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~--~~~~~-~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~--a~~~~~~d~~G~~P 104 (429)
...|++.+|.. |..+.+..++ +.. ..... ....+...++-.... ...+++++|+++| ++++ ..+..|.||
T Consensus 36 g~t~L~~A~~~-~~~~~v~~Ll-~~~~~~~~~~~~~~~g~t~L~~A~~~--~~~~~~~~Ll~~g~~~~~~-~~~~~g~t~ 110 (228)
T 2dzn_A 36 GRIPLHWSVSF-QAHEITSFLL-SKMENVNLDDYPDDSGWTPFHIACSV--GNLEVVKSLYDRPLKPDLN-KITNQGVTC 110 (228)
T ss_dssp SCCHHHHHHHT-TCHHHHHHHH-HTCTTCCGGGCCCTTSCCHHHHHHHH--CCHHHHHHHHSSSSCCCTT-CCCTTCCCH
T ss_pred CCCHHHHHHHc-CCHHHHHHHH-hccccccccccCCCCCCCHHHHHHHc--CCHHHHHHHHhCCCCcccc-cCCcCCCCH
Confidence 45688888887 8888773332 111 00000 011111111111111 1368999999999 7777 355669999
Q ss_pred ccccccCCccccccccCCC-CCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHc
Q 042589 105 RISTFGQDVNAFTARETPP-DPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIEN 183 (429)
Q Consensus 105 ~~~~~~~~~~~~~~i~ll~-~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~ 183 (429)
+|.+...+.. +.++.+. .+.+ .+.+|..|+||||+|+..|+.++++.|++.++..++.+|..|+||||+|+..
T Consensus 111 L~~A~~~~~~--~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 111 LHLAVGKKWF--EVSQFLIENGAS----VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184 (228)
T ss_dssp HHHHHHTTCH--HHHHHHHHTTCC----SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCH--hHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHc
Confidence 9988764432 2233332 2222 2567789999999999999999999999988566788999999999999999
Q ss_pred CCHHHHHHHH-cCCCccccccccccCCCCcHHHHHHHcC
Q 042589 184 RQTHVYNLLR-SREELGETIFWQVDNLGNSALHLAATYG 221 (429)
Q Consensus 184 g~~~iv~~Ll-~~~~~~~~~in~~D~~G~TpLHlAa~~g 221 (429)
|+.+++++|+ +.|+ +++.+|.+|.||||+|+..+
T Consensus 185 ~~~~~v~~Ll~~~ga----~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 185 GHGDAAVLLVEKYGA----EYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp TCHHHHHHHHHHHCC----CSCCBCTTSCBGGGGCSSTT
T ss_pred CCHHHHHHHHHhcCC----CCCccCCCCCcHHHHHHHHH
Confidence 9999999999 7888 89999999999999997643
No 34
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.76 E-value=1.1e-18 Score=148.83 Aligned_cols=87 Identities=17% Similarity=0.077 Sum_probs=79.3
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCC-CCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPG-EKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSA 213 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~-G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~Tp 213 (429)
+|..|+||||+|+. |+.+++++|++++.+ ++.+|.. |+||||+|+..|+.+++++|++.++ +++.+|.+|+||
T Consensus 41 ~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~tp 114 (136)
T 1d9s_A 41 LNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAGA----RLDVCDAWGRLP 114 (136)
T ss_dssp CCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCC----CCCCCSSSSSCH
T ss_pred cCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCccCCCCCCH
Confidence 45689999999999 999999999998766 4778888 9999999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCcccc
Q 042589 214 LHLAATYGDHRPWH 227 (429)
Q Consensus 214 LHlAa~~g~~~~~~ 227 (429)
||+|+..|+.++++
T Consensus 115 l~~A~~~~~~~~~~ 128 (136)
T 1d9s_A 115 VDLAEEQGHRDIAR 128 (136)
T ss_dssp HHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHH
Confidence 99999999876654
No 35
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.76 E-value=2.4e-19 Score=166.41 Aligned_cols=183 Identities=9% Similarity=-0.028 Sum_probs=129.7
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCC----CCCcccccCCCCcc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRN----PHVYKYVYNGREPR 105 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a----~~~~~~d~~G~~P~ 105 (429)
...|++.+|.. |+.+.+..++ +...........+...++..... ...+++++|+++++ +++ ..+..|.||+
T Consensus 46 g~t~L~~A~~~-~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~--~~~~~~~~Ll~~~~~~~~~~~-~~~~~g~t~L 120 (241)
T 1k1a_A 46 RQTPLHLAVIT-TLPSVVRLLV-TAGASPMALDRHGQTAAHLACEH--RSPTCLRALLDSAAPGTLDLE-ARNYDGLTAL 120 (241)
T ss_dssp SCCHHHHHHHT-TCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHT--TCHHHHHHHHHHSCTTSCCTT-CCCTTSCCHH
T ss_pred CCCHHHHHHHc-CCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHc--CCHHHHHHHHHcCCCcccccc-ccCcCCCcHH
Confidence 45688888887 8888773332 11111111111111111111111 23689999999998 666 3455699999
Q ss_pred cccccCCccccccccCCC-CCCCcccccccCC-CCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHc
Q 042589 106 ISTFGQDVNAFTARETPP-DPNTYKKKNARRS-RRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIEN 183 (429)
Q Consensus 106 ~~~~~~~~~~~~~i~ll~-~~~~~~~~~~~~d-~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~ 183 (429)
|.++..+.. +.++.+. .+.+. +..+ ..|.||||+|++.|+.++++.|++++.+ ++.+|..|+||||+|+..
T Consensus 121 ~~A~~~~~~--~~~~~Ll~~g~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 121 HVAVNTECQ--ETVQLLLERGADI----DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGR 193 (241)
T ss_dssp HHHHHHTCH--HHHHHHHHTTCCT----TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHH
T ss_pred HHHHHcCCH--HHHHHHHHcCCCc----ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHc
Confidence 988764432 2233332 22221 3344 6799999999999999999999998766 577899999999999999
Q ss_pred CCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCccccc
Q 042589 184 RQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 184 g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~~ 228 (429)
|+.+++++|++.|+ +++.+|.+|+||||+|+..|+.++++.
T Consensus 194 ~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~A~~~~~~~i~~~ 234 (241)
T 1k1a_A 194 GLLPLVRTLVRSGA----DSSLKNCHNDTPLMVARSRRVIDILRG 234 (241)
T ss_dssp TCHHHHHHHHHTTC----CTTCCCTTSCCTTTTCSSHHHHHHHTC
T ss_pred CCHHHHHHHHhcCC----CCCCcCCCCCCHHHHHHhcCcHHHHhh
Confidence 99999999999998 899999999999999999988776653
No 36
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.76 E-value=7.8e-19 Score=169.06 Aligned_cols=180 Identities=13% Similarity=-0.002 Sum_probs=124.3
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTF 109 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~ 109 (429)
...|++.+|.. |+.+.++.++ +...+.......+...++-.... ...+++++|+++|++++ ..|..|+||+|.++
T Consensus 59 g~t~L~~Aa~~-g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 59 DWSPMHEAAIH-GHQLSLRNLI-SQGWAVNIITADHVSPLHEACLG--GHLSCVKILLKHGAQVN-GVTADWHTPLFNAC 133 (285)
T ss_dssp SCCHHHHHHHT-TCHHHHHHHH-HTTCCSCEECTTCCCHHHHHHHT--TCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHH
T ss_pred CCCHHHHHHHc-CCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHC--CcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHH
Confidence 56788888887 8888773332 11111110111111111111111 13689999999999998 45667999999887
Q ss_pred cCCccccccccCCCC-CCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHH
Q 042589 110 GQDVNAFTARETPPD-PNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHV 188 (429)
Q Consensus 110 ~~~~~~~~~i~ll~~-~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~i 188 (429)
..+..+ .++.|.+ +.+. + .+.+|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.++
T Consensus 134 ~~~~~~--~v~~Ll~~g~~~----~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~ 205 (285)
T 3d9h_A 134 VSGSWD--CVNLLLQHGASV----Q-PESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRAC 205 (285)
T ss_dssp HHTCHH--HHHHHHHTTCCS----S-CSCTTSCHHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHH
T ss_pred HcCHHH--HHHHHHHCCCCC----C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHH
Confidence 644332 2333322 2221 1 234599999999999999999999988765 47788999999999999999999
Q ss_pred HHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 189 YNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 189 v~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++|++.++ ++|. |.+|+||||+|+..|+.++++
T Consensus 206 v~~Ll~~ga----~~~~-~~~g~t~L~~A~~~~~~~~v~ 239 (285)
T 3d9h_A 206 VKKLLESGA----DVNQ-GKGQDSPLHAVVRTASEELAC 239 (285)
T ss_dssp HHHHHHTTC----CTTC-CBTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCC----CCCC-CCCCCCHHHHHHHcCCHHHHH
Confidence 999999987 6774 889999999999999977665
No 37
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.75 E-value=6.2e-19 Score=159.84 Aligned_cols=145 Identities=17% Similarity=0.083 Sum_probs=110.1
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchh--------HHHHHHHHHhCCCCCCcccccCC
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTW--------AIQVFDELVDDRNPHVYKYVYNG 101 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~--------a~~iv~~Ll~~~a~~~~~~d~~G 101 (429)
.|.++|.++.. |+++.+++++ . .+........+....|.. ..+++++|+++|+++|
T Consensus 6 ~~~~l~~Aa~~-g~~~~~~~l~-----~---~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn------- 69 (186)
T 3t8k_A 6 EYRTVSAAAML-GTYEDFLELF-----E---KGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK------- 69 (186)
T ss_dssp HCSSHHHHHHH-SCHHHHHHHH-----H---HSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS-------
T ss_pred cccHHHHHHHc-CCHHHHHHHH-----h---cCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC-------
Confidence 35678888877 8888764433 1 111111112222233322 3578999999999988
Q ss_pred CCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCc------HHHHHHHHHhCCCccccCCCCCC-
Q 042589 102 REPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGV------TEMVKKILDTFPVAIWDLDPGEK- 174 (429)
Q Consensus 102 ~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~------~eiv~~Ll~~~~~~~~~~d~~G~- 174 (429)
.+|.+|+||||+|+..|+ .++++.|++++.+ ++.+|..|+
T Consensus 70 --------------------------------~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~t 116 (186)
T 3t8k_A 70 --------------------------------SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKI 116 (186)
T ss_dssp --------------------------------CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTB
T ss_pred --------------------------------CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCc
Confidence 245789999999999997 6899999998766 588999999
Q ss_pred cHHHHHHHcC-----CHHHHHHHHc-CCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 175 NVLLLAIENR-----QTHVYNLLRS-REELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 175 t~LH~A~~~g-----~~~iv~~Ll~-~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
||||+|+..+ +.+++++|++ .|+ ++|.+|.+|+||||+|+..|+.++++
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~ga----d~~~~d~~G~TpL~~A~~~~~~~~v~ 171 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGL----QLLIKDKWGLTALEFVKRCQKPIALK 171 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTC----CTTCCCTTSCCHHHHHHTTTCHHHHH
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCC----CCcccCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999954 4579999999 888 99999999999999999999966554
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.75 E-value=7.1e-19 Score=168.98 Aligned_cols=181 Identities=16% Similarity=0.089 Sum_probs=121.3
Q ss_pred CchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccccC
Q 042589 32 PSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTFGQ 111 (429)
Q Consensus 32 ~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~ 111 (429)
.+++.+|.. |+.+.++.++ +...+.......+...++-.... ...+++++|+++|++++ ..|..|.||+|.++..
T Consensus 42 t~l~~A~~~-g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 42 AVFLAACSS-GDTEEVLRLL-ERGADINYANVDGLTALHQACID--DNVDMVKFLVENGANIN-QPDNEGWIPLHAAASC 116 (299)
T ss_dssp HHHHHHHHH-TCHHHHHHHH-HHCCCTTCBCTTCCBHHHHHHHT--TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHc-CCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHc--CCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHc
Confidence 366777776 9999884443 21111111111111122211111 13689999999999998 4566799999988764
Q ss_pred CccccccccCCC-CCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCc-------------------------
Q 042589 112 DVNAFTARETPP-DPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVA------------------------- 165 (429)
Q Consensus 112 ~~~~~~~i~ll~-~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~------------------------- 165 (429)
+..+ .++.|. .+.+ .+..|..|.||||+|+..|+.++++.++...+..
T Consensus 117 g~~~--~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 117 GYLD--IAEYLISQGAH----VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp TCHH--HHHHHHHTTCC----TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCHH--HHHHHHhCCCC----CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 4332 233332 2222 2456778889999998888888888777543221
Q ss_pred -cccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 166 -IWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 166 -~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
....|..|+||||+|+.+|+.+++++|++.|+ ++|.+|.+|+||||+|+..|+.++++
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~----d~~~~d~~g~tpL~~A~~~~~~~~v~ 249 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY----DVNIKDYDGWTPLHAAAHWGKEEACR 249 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTC----CTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCC----CCCCcCCCCCcHHHHHHhcCCHHHHH
Confidence 12246788999999999999999999998887 88889999999999999999877765
No 39
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.75 E-value=5.5e-19 Score=165.64 Aligned_cols=136 Identities=11% Similarity=-0.067 Sum_probs=94.4
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.++++.|+++|++++ ++..|.||+|.++..+.. +.++.|.+... +.+.+|..|+||||+||..|+.+++++|+
T Consensus 18 ~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~--~~v~~Ll~~g~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 90 (239)
T 1ycs_B 18 RKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEF--DLVQRIIYEVD---DPSLPNDEGITALHNAVCAGHTEIVKFLV 90 (239)
T ss_dssp ---------------------CHHHHHHHHHHTCH--HHHHHHTSTTS---SCCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCH--HHHHHHHHcCC---CCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 456788888888888 666788888877653332 23333332221 22567889999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCC-cHHHHH--HHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGN-SALHLA--ATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~-TpLHlA--a~~g~~~~~~ 227 (429)
+++.+ ++.+|..|+||||+|+.+|+.+++++|++.|+ +++.+|.+|. ||||+| +..|+.++++
T Consensus 91 ~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 91 QFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGA----AVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp HHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred HcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 98766 57889999999999999999999999999998 8999998887 999999 7778877664
No 40
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.75 E-value=3e-18 Score=167.43 Aligned_cols=187 Identities=13% Similarity=0.027 Sum_probs=125.2
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTF 109 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~ 109 (429)
...|++.+|.. |..++++.++ +...+.......+...++-.... ...+++++|+++|++++ ..+..|.||+|.+.
T Consensus 58 g~t~L~~A~~~-g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~--g~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~ 132 (351)
T 3utm_A 58 KSTPLHLAAGY-NRVRIVQLLL-QHGADVHAKDKGGLVPLHNACSY--GHYEVTELLLKHGACVN-AMDLWQFTPLHEAA 132 (351)
T ss_dssp CCCHHHHHHHT-TCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHT--TCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHH
T ss_pred CCCHHHHHHHc-CCHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHC--CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHH
Confidence 45678888777 8887773332 21111111111111111111111 13688899999999888 35556999998776
Q ss_pred cCCccccccccCC-CCCCCccc--------------------------------------------------ccccCCCC
Q 042589 110 GQDVNAFTARETP-PDPNTYKK--------------------------------------------------KNARRSRR 138 (429)
Q Consensus 110 ~~~~~~~~~i~ll-~~~~~~~~--------------------------------------------------~~~~~d~~ 138 (429)
..+..+ .++.| +.+.+... .....+..
T Consensus 133 ~~~~~~--~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 210 (351)
T 3utm_A 133 SKNRVE--VCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210 (351)
T ss_dssp HTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTT
T ss_pred HcCCHH--HHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCC
Confidence 533322 12222 11111100 11234567
Q ss_pred CCcHHHHHHHc---CcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHH
Q 042589 139 KETPILVAAKM---GVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALH 215 (429)
Q Consensus 139 G~TpLh~Aa~~---G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLH 215 (429)
|.||||+|+.. +..++++.|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++.|+ ++|.+|.+|+||||
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----~~n~~d~~g~t~L~ 285 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRKGAN-VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGA----KMNALDSLGQTALH 285 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCcCCCCCCHHH
Confidence 89999999999 558999999988665 47789999999999999999999999999998 89999999999999
Q ss_pred HHHHcCCCccccc
Q 042589 216 LAATYGDHRPWHT 228 (429)
Q Consensus 216 lAa~~g~~~~~~~ 228 (429)
+|+..|+.+++++
T Consensus 286 ~A~~~~~~~~v~~ 298 (351)
T 3utm_A 286 RAALAGHLQTCRL 298 (351)
T ss_dssp HHHHHTCHHHHHH
T ss_pred HHHHcCcHHHHHH
Confidence 9999999887763
No 41
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.75 E-value=2.7e-19 Score=172.39 Aligned_cols=180 Identities=12% Similarity=0.005 Sum_probs=130.8
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTF 109 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~ 109 (429)
...|++.+|.. |+.+.+..++ +...+.... .+...++-.... ...+++++|+++|++++ ..|..|+||+|.++
T Consensus 31 g~t~L~~A~~~-g~~~~v~~Ll-~~g~~~~~~--~g~t~L~~A~~~--g~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 31 GHSASYYAIAD-NNVRLVCTLL-NAGALKNLL--ENEFPLHQAATL--EDTKIVKILLFSGLDDS-QFDDKGNTALYYAV 103 (285)
T ss_dssp SCCHHHHHHHT-TCHHHHHHHH-HTTGGGSCC--TTCCHHHHHTTS--SSCHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHc-CCHHHHHHHH-hCCCCCCCC--CCCCHHHHHHHc--CCHHHHHHHHHCCCCCC-CcCCCCCcHHHHHH
Confidence 56788888887 8888774333 221111111 011111111111 13689999999999999 45667999999887
Q ss_pred cCCccccccccCCCCCCCcccccccCCCCC-CcHHHHHHHcCcHHHHHHHHHhCCCccccCCC-CCCcHHHHHHHcCCHH
Q 042589 110 GQDVNAFTARETPPDPNTYKKKNARRSRRK-ETPILVAAKMGVTEMVKKILDTFPVAIWDLDP-GEKNVLLLAIENRQTH 187 (429)
Q Consensus 110 ~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G-~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~-~G~t~LH~A~~~g~~~ 187 (429)
..+..+ .++.|.+.. ...+.+|..| .||||+|+..|+.+++++|++++++. .|. .|+||||+|+.+|+.+
T Consensus 104 ~~g~~~--~v~~Ll~~g---a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~g~~~ 175 (285)
T 3kea_A 104 DSGNMQ--TVKLFVKKN---WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKNGHVD 175 (285)
T ss_dssp HTTCHH--HHHHHHHHC---GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT---CCCSTHHHHHHHHHHTTCHH
T ss_pred HcCCHH--HHHHHHhcC---CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc---ccccCCccHHHHHHHcChHH
Confidence 644332 233333221 1225677788 79999999999999999999997765 234 8999999999999999
Q ss_pred HHHHHHcCCCccccccccccCCCCcH-HHHHHHcCCCccccc
Q 042589 188 VYNLLRSREELGETIFWQVDNLGNSA-LHLAATYGDHRPWHT 228 (429)
Q Consensus 188 iv~~Ll~~~~~~~~~in~~D~~G~Tp-LHlAa~~g~~~~~~~ 228 (429)
++++|++.|+ ++|.+|.+|+|| ||+|+..|+.+++++
T Consensus 176 ~v~~Ll~~ga----d~n~~~~~g~t~~L~~A~~~~~~~~v~~ 213 (285)
T 3kea_A 176 MMILLLDYMT----STNTNNSLLFIPDIKLAIDNKDIEMLQA 213 (285)
T ss_dssp HHHHHHHHHH----HTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred HHHHHHHcCC----CCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 9999999988 899999999998 999999999887763
No 42
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=3.2e-18 Score=162.01 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=103.4
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCC-CCCCCccc------ccccCCCCCCcHHHHHHHcCcH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETP-PDPNTYKK------KNARRSRRKETPILVAAKMGVT 152 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll-~~~~~~~~------~~~~~d~~G~TpLh~Aa~~G~~ 152 (429)
.+++++|+++|++++ ..+..|.||+|.+...+..+ .++.+ +.+.+... .....+..|.||||+|+..|+.
T Consensus 85 ~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~--~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T 1wdy_A 85 VKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVK--ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp HHHHHHHHHTTCCTT-CBCTTCCBHHHHHHHTTCHH--HHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCCCC-ccCcccCCHHHHHHHhCCHH--HHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence 688889999988888 45666899988776544322 22222 22221111 0112266788999999999999
Q ss_pred HHHHHHHHhCCCccccCCCCCCcHHHHHHHcCC----HHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 153 EMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQ----THVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 153 eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~----~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++++.|++..+..++..|..|+||||+|+..++ .+++++|++.+. ++|.+|.+|+||||+|+..|+.++++
T Consensus 162 ~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~v~ 236 (285)
T 1wdy_A 162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGA----DVNVRGERGKTPLILAVEKKHLGLVQ 236 (285)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTC----CSSCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCC----CCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 999988887555567788888999999988888 888888888887 78888888999999998888877655
No 43
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.74 E-value=1.5e-18 Score=154.89 Aligned_cols=133 Identities=17% Similarity=0.063 Sum_probs=91.5
Q ss_pred HHHHHhC-CCCCCcccccCCCCcccccccCCccccccccCCC-CCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 042589 83 FDELVDD-RNPHVYKYVYNGREPRISTFGQDVNAFTARETPP-DPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILD 160 (429)
Q Consensus 83 v~~Ll~~-~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~-~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~ 160 (429)
+++|+++ +.+++ ..+..|+||+|.++..+.. +.++.|. .+.+ .+..|..|.||||+|+..|+.+++++|++
T Consensus 21 v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (179)
T 3f6q_A 21 VRLWLDNTENDLN-QGDDHGFSPLHWACREGRS--AVVEMLIMRGAR----INVMNRGDDTPLHLAASHGHRDIVQKLLQ 93 (179)
T ss_dssp HHHHHHCTTSCTT-CCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhcCccccc-ccCCCCCCHHHHHHHcCcH--HHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3555555 33454 2344466666655443222 1122221 1111 13456778999999999999999999998
Q ss_pred hCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 161 TFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 161 ~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++.+ ++..|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|.||||+|+..++.++++
T Consensus 94 ~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~A~~~~~~~~~~ 155 (179)
T 3f6q_A 94 YKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGA----LVSICNKYGEMPVDKAKAPLRELLRE 155 (179)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CSSBCCTTSCCGGGGSCHHHHHHHHH
T ss_pred cCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CcchhccCCCCcHHHHHHHHHHHHHH
Confidence 8655 46788899999999999999999999998887 78889999999999988877655443
No 44
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.74 E-value=1.4e-18 Score=155.18 Aligned_cols=154 Identities=17% Similarity=0.081 Sum_probs=107.7
Q ss_pred chHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccccCC
Q 042589 33 SDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTFGQD 112 (429)
Q Consensus 33 ~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~ 112 (429)
+++.+|.+ |+.+.++.++ +...++......+...+..... ....+++++|+++|++++ ..|..|+||+|.++..+
T Consensus 7 ~L~~Aa~~-G~~~~v~~Ll-~~Gadvn~~d~~g~t~l~~a~~--~~~~~~~~~ll~~gad~~-~~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 7 RLIEAAEN-GNKDRVKDLI-ENGADVNASDSDGRTPLHHAAE--NGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHT-TCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH--TTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHc-CCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHH--cCCHHHHHHHHhcccchh-hhccCCCCHHHHHHHcC
Confidence 36777766 9999884443 2222221111111111111111 123588999999999999 46667999999887654
Q ss_pred ccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHH
Q 042589 113 VNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLL 192 (429)
Q Consensus 113 ~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~L 192 (429)
..+ .++.|.+... +.+.+|.+|+||||+||+.|+.++|+.|++++.+ ++.+|.+|+||||+|+.+|+.+++++|
T Consensus 82 ~~~--~v~~Ll~~ga---dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 82 HKE--VVKLLISKGA---DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp CHH--HHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CHH--HHHHHHHCcC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 433 3444433221 2366888999999999999999999999998766 477899999999999999999999999
Q ss_pred HcCCC
Q 042589 193 RSREE 197 (429)
Q Consensus 193 l~~~~ 197 (429)
++.|+
T Consensus 156 l~~GA 160 (169)
T 4gpm_A 156 EKQGG 160 (169)
T ss_dssp HTC--
T ss_pred HHCCC
Confidence 99998
No 45
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.74 E-value=1.2e-18 Score=152.97 Aligned_cols=89 Identities=18% Similarity=0.125 Sum_probs=77.7
Q ss_pred ccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCc
Q 042589 133 ARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNS 212 (429)
Q Consensus 133 ~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~T 212 (429)
+.+|.+|+||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+.+|+.+++++|++.++ +++.+|.+|+|
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t 143 (165)
T 3twr_A 69 HAKDKGGLVPLHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGA----DPTKKNRDGNT 143 (165)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCC
T ss_pred CccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCCC
Confidence 34567899999999999999999999988665 47789999999999999999999999999988 89999999999
Q ss_pred HHHHHHHcCCCcccc
Q 042589 213 ALHLAATYGDHRPWH 227 (429)
Q Consensus 213 pLHlAa~~g~~~~~~ 227 (429)
|||+|.. |+.++++
T Consensus 144 ~l~~a~~-~~~~i~~ 157 (165)
T 3twr_A 144 PLDLVKD-GDTDIQD 157 (165)
T ss_dssp TGGGSCT-TCHHHHH
T ss_pred hhHhHhc-CChHHHH
Confidence 9999776 7755544
No 46
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.74 E-value=1.3e-19 Score=179.81 Aligned_cols=125 Identities=14% Similarity=0.029 Sum_probs=101.4
Q ss_pred cccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCc----cccCCCC
Q 042589 97 YVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVA----IWDLDPG 172 (429)
Q Consensus 97 ~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~----~~~~d~~ 172 (429)
.+..|.||+|.++..+....+.++.|.+... ..+..|..|+||||+|+..|+.+++++|++++++. ++..|..
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 210 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGA---SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ 210 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTT
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCC---CCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCC
Confidence 3445788888776655223444444433211 23567889999999999999999999999987662 5778999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCccccc
Q 042589 173 EKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 173 G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~~ 228 (429)
|+||||+|+.+|+.+++++|++.|+ ++|.+|.+|.||||+|+..|+.+++++
T Consensus 211 g~t~L~~A~~~g~~~~v~~Ll~~ga----d~~~~d~~g~tpL~~A~~~g~~~~v~~ 262 (364)
T 3ljn_A 211 GNSHLHWAILINWEDVAMRFVEMGI----DVNMEDNEHTVPLYLSVRAAMVLLTKE 262 (364)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHTTTC----CTTCCCTTSCCHHHHHHHTCCHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCCHHHHHHHhChHHHHHH
Confidence 9999999999999999999999998 899999999999999999999888764
No 47
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.74 E-value=2.6e-18 Score=159.36 Aligned_cols=139 Identities=20% Similarity=0.129 Sum_probs=116.4
Q ss_pred HHHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHH
Q 042589 79 AIQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 158 (429)
Q Consensus 79 a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~L 158 (429)
..+++++|+++|++++ ..+..|+||+|.++..+.. +.++.+.+... ..+..+..|.||||+|+..|+.+++++|
T Consensus 23 ~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~~~~L 96 (237)
T 3b7b_A 23 HVDICHMLVQAGANID-TCSEDQRTPLMEAAENNHL--EAVKYLIKAGA---LVDPKDAEGSTCLHLAAKKGHYEVVQYL 96 (237)
T ss_dssp CHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCH--HHHHHHHTTTC---CCCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHHcCCCcC-ccCCCCCCHHHHHHHhCCH--HHHHHHHhCCC---CCCCCCCCCCcHHHHHHHcCCHHHHHHH
Confidence 3689999999999999 4566799999988765433 33333333221 1245678899999999999999999999
Q ss_pred HHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 159 LDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 159 l~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++.++...+..|..|+||||+|+..|+.+++++|++.+. +++.+|.+|+||||+|+..|+.++++
T Consensus 97 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 97 LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGS----DINIRDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp HTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCccCCCCCCHHHHHHHCCCHHHHH
Confidence 999867678889999999999999999999999999998 89999999999999999999977665
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.74 E-value=8.8e-19 Score=165.27 Aligned_cols=136 Identities=14% Similarity=0.082 Sum_probs=102.0
Q ss_pred HHHHHHhCCCCCCcc---cccCCCCcccccccC-CccccccccCCCCC-CC-------cccccccCCCCCCcHHHHHHHc
Q 042589 82 VFDELVDDRNPHVYK---YVYNGREPRISTFGQ-DVNAFTARETPPDP-NT-------YKKKNARRSRRKETPILVAAKM 149 (429)
Q Consensus 82 iv~~Ll~~~a~~~~~---~d~~G~~P~~~~~~~-~~~~~~~i~ll~~~-~~-------~~~~~~~~d~~G~TpLh~Aa~~ 149 (429)
++++|++++++++.. .|+.|+||+|.++.. .....+.++.|.+. .. .+...+..|..|+||||+||..
T Consensus 24 ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~ 103 (260)
T 3jxi_A 24 LLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIER 103 (260)
T ss_dssp HHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHT
T ss_pred HHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHc
Confidence 456888889888822 125599999977621 12222333333221 11 0111234456899999999999
Q ss_pred CcHHHHHHHHHhCCCccccCC--------------CCCCcHHHHHHHcCCHHHHHHHHc---CCCccccccccccCCCCc
Q 042589 150 GVTEMVKKILDTFPVAIWDLD--------------PGEKNVLLLAIENRQTHVYNLLRS---REELGETIFWQVDNLGNS 212 (429)
Q Consensus 150 G~~eiv~~Ll~~~~~~~~~~d--------------~~G~t~LH~A~~~g~~~iv~~Ll~---~~~~~~~~in~~D~~G~T 212 (429)
|+.++|++|++++.+. +..| ..|+||||+|+..|+.+++++|++ .++ ++|.+|.+|+|
T Consensus 104 g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga----~~~~~d~~g~T 178 (260)
T 3jxi_A 104 RCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA----DLRRQDSRGNT 178 (260)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC----CTTCCCTTSCC
T ss_pred CCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC----CCcccCCCCCc
Confidence 9999999999987664 5666 689999999999999999999999 777 89999999999
Q ss_pred HHHHHHHcCC
Q 042589 213 ALHLAATYGD 222 (429)
Q Consensus 213 pLHlAa~~g~ 222 (429)
|||+|+..|+
T Consensus 179 pLh~A~~~~~ 188 (260)
T 3jxi_A 179 VLHALVAIAD 188 (260)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhcc
Confidence 9999999887
No 49
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.74 E-value=1.5e-18 Score=166.76 Aligned_cols=179 Identities=13% Similarity=0.057 Sum_probs=122.5
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTF 109 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~ 109 (429)
...|++.+|.. |+.+++..++ +...+.......+...++-.... ...+++++|+++|++++ ..+..|.||+|.+.
T Consensus 73 g~t~L~~A~~~-g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~--g~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~ 147 (299)
T 1s70_B 73 GLTALHQACID-DNVDMVKFLV-ENGANINQPDNEGWIPLHAAASC--GYLDIAEYLISQGAHVG-AVNSEGDTPLDIAE 147 (299)
T ss_dssp CCBHHHHHHHT-TCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHH--TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCC
T ss_pred CCCHHHHHHHc-CCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHc--CCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHH
Confidence 46788888888 8888773322 21111111111111111111111 13689999999999999 45667999999886
Q ss_pred cCCccccccccCCC-CCCCc----------------------ccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCcc
Q 042589 110 GQDVNAFTARETPP-DPNTY----------------------KKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAI 166 (429)
Q Consensus 110 ~~~~~~~~~i~ll~-~~~~~----------------------~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~ 166 (429)
..+...+... ++. .+... .......+..|.||||+|+..|+.++++.|++++.+ +
T Consensus 148 ~~~~~~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~ 225 (299)
T 1s70_B 148 EEAMEELLQN-EVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-V 225 (299)
T ss_dssp SHHHHHHHHH-HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-T
T ss_pred hcchHHHHHH-HHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-C
Confidence 5322211100 000 00000 001123557899999999999999999999988765 5
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHH
Q 042589 167 WDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAAT 219 (429)
Q Consensus 167 ~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~ 219 (429)
+.+|..|+||||+|+.+|+.+++++|++.|+ +++.+|.+|+||||+|+.
T Consensus 226 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----d~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 226 NIKDYDGWTPLHAAAHWGKEEACRILVENLC----DMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCTTTSCCS
T ss_pred CCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHH
Confidence 7789999999999999999999999999998 899999999999999954
No 50
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.74 E-value=3.7e-18 Score=135.95 Aligned_cols=85 Identities=29% Similarity=0.296 Sum_probs=77.8
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHH
Q 042589 138 RKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLA 217 (429)
Q Consensus 138 ~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlA 217 (429)
+|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.++ +++.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA----DVNAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCccCCCCCCHHHHH
Confidence 489999999999999999999998766 57889999999999999999999999999998 8999999999999999
Q ss_pred HHcCCCcccc
Q 042589 218 ATYGDHRPWH 227 (429)
Q Consensus 218 a~~g~~~~~~ 227 (429)
+..|+.++++
T Consensus 76 ~~~~~~~~~~ 85 (93)
T 1n0q_A 76 ARNGHLEVVK 85 (93)
T ss_dssp HHTTCHHHHH
T ss_pred HHcCCHHHHH
Confidence 9999977664
No 51
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.74 E-value=3e-18 Score=162.17 Aligned_cols=141 Identities=13% Similarity=0.035 Sum_probs=113.2
Q ss_pred HHHHHHHHHhCCCCCCccc---------ccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHc
Q 042589 79 AIQVFDELVDDRNPHVYKY---------VYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKM 149 (429)
Q Consensus 79 a~~iv~~Ll~~~a~~~~~~---------d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~ 149 (429)
..+++++|+++|++++... +..|.||+|.+...+.. +.++.+.+... ...+..|..|+||||+|+..
T Consensus 117 ~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~~~--~~~~~~~~~g~t~l~~a~~~ 192 (285)
T 1wdy_A 117 KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV--EVLKILLDEMG--ADVNACDNMGRNALIHALLS 192 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH--HHHHHHHHTSC--CCTTCCCTTSCCHHHHHHHC
T ss_pred CHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH--HHHHHHHHhcC--CCCCccCCCCCCHHHHHHHc
Confidence 3689999999999998321 56699999988764432 22333322101 11255778999999999999
Q ss_pred Cc----HHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHc-CCCccccccccccCCCCcHHHHHHHcCCCc
Q 042589 150 GV----TEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRS-REELGETIFWQVDNLGNSALHLAATYGDHR 224 (429)
Q Consensus 150 G~----~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~-~~~~~~~~in~~D~~G~TpLHlAa~~g~~~ 224 (429)
|+ .++++.|++++.+ ++.+|..|+||||+|+..|+.+++++|++ .+. +++.+|.+|+||||+|+..|+.+
T Consensus 193 ~~~~~~~~i~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~----~~~~~~~~g~t~l~~A~~~~~~~ 267 (285)
T 1wdy_A 193 SDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI----EINDTDSDGKTALLLAVELKLKK 267 (285)
T ss_dssp SCTTTHHHHHHHHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSC----CTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cccchHHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCC----CccccCCCCCcHHHHHHHcCcHH
Confidence 99 9999999988765 47789999999999999999999999999 666 89999999999999999999987
Q ss_pred cccc
Q 042589 225 PWHT 228 (429)
Q Consensus 225 ~~~~ 228 (429)
++++
T Consensus 268 i~~~ 271 (285)
T 1wdy_A 268 IAEL 271 (285)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 52
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.74 E-value=1.2e-18 Score=167.64 Aligned_cols=173 Identities=10% Similarity=-0.019 Sum_probs=125.1
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTF 109 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~ 109 (429)
...|++.+|.. |+.++++.++ +...+.......+...+...... ...+++++|+++|++++ .++.|.||+|.+.
T Consensus 92 g~t~L~~A~~~-g~~~~v~~Ll-~~ga~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~ 165 (285)
T 3d9h_A 92 HVSPLHEACLG-GHLSCVKILL-KHGAQVNGVTADWHTPLFNACVS--GSWDCVNLLLQHGASVQ--PESDLASPIHEAA 165 (285)
T ss_dssp CCCHHHHHHHT-TCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHH--TCHHHHHHHHHTTCCSS--CSCTTSCHHHHHH
T ss_pred CCCHHHHHHHC-CcHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHc--CHHHHHHHHHHCCCCCC--CCCCCCCHHHHHH
Confidence 56788888887 8888773322 21111111111111111111111 13689999999999999 7888999999887
Q ss_pred cCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHH
Q 042589 110 GQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVY 189 (429)
Q Consensus 110 ~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv 189 (429)
..+..+ .++.|.+... ..+.+|..|.||||+|+..|+.++++.|++.+.+. + .|..|+||||+|+..|+.+++
T Consensus 166 ~~g~~~--~v~~Ll~~g~---~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~-~~~~g~t~L~~A~~~~~~~~v 238 (285)
T 3d9h_A 166 RRGHVE--CVNSLIAYGG---NIDHKISHLGTPLYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVVRTASEELA 238 (285)
T ss_dssp HHTCHH--HHHHHHHTTC---CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCT-T-CCBTTBCHHHHHHHTTCHHHH
T ss_pred HcCCHH--HHHHHHHCCC---CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCCHHHH
Confidence 644332 2333322211 12567789999999999999999999999987664 3 488999999999999999999
Q ss_pred HHHHcCCCccccccccccCCCCcHHHHHHH
Q 042589 190 NLLRSREELGETIFWQVDNLGNSALHLAAT 219 (429)
Q Consensus 190 ~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~ 219 (429)
++|++.|+ +++.+|.+|+||||+|+.
T Consensus 239 ~~Ll~~ga----d~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 239 CLLMDFGA----DTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp HHHHHTTC----CTTCCCTTSCCGGGGSCT
T ss_pred HHHHHCCC----CCCCcCCCCCCHHHHhcC
Confidence 99999998 899999999999999993
No 53
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.74 E-value=2.9e-18 Score=143.60 Aligned_cols=98 Identities=18% Similarity=0.097 Sum_probs=87.1
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+
T Consensus 20 ~~~v~~ll~~~~~~~---------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll 60 (123)
T 3aaa_C 20 LDEVKDYVAKGEDVN---------------------------------------RTLEGGRKPLHYAADCGQLEILEFLL 60 (123)
T ss_dssp HHHHHHHHHTTCCTT---------------------------------------SCCTTSSCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcC---------------------------------------ccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 467789999998887 24567999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcC
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYG 221 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g 221 (429)
+.+.+ ++.+|..|+||||+|+..|+.+++++|++.++ +++.+|.+|.||||+|+..+
T Consensus 61 ~~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 61 LKGAD-INAPDKHHITPLLSAVYEGHVSCVKLLLSKGA----DKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp TTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHCCCHH
T ss_pred HcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHhCCHH
Confidence 88666 57789999999999999999999999999998 89999999999999995443
No 54
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.74 E-value=2.9e-18 Score=174.12 Aligned_cols=137 Identities=14% Similarity=0.071 Sum_probs=91.0
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|++.|++++ ..+..|.||+|.+...+..+ .++.|.+... ..+..+..|.||||+|++.|+.++++.|+
T Consensus 225 ~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~--~v~~Ll~~~~---~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 298 (437)
T 1n11_A 225 VEVARSLLQYGGSAN-AESVQGVTPLHLAAQEGHAE--MVALLLSKQA---NGNLGNKSGLTPLHLVAQEGHVPVADVLI 298 (437)
T ss_dssp HHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHH--HHHHHHTTTC---CTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHCCCHH--HHHHHHhcCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 466777777777766 23445777777665433322 2222222111 11445667778888888888888887777
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+++.+ ++.+|..|+||||+|+.+|+.+++++|++.++ ++|.+|..|+||||+|+..|+.++++
T Consensus 299 ~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----d~n~~~~~g~t~L~~A~~~g~~~iv~ 361 (437)
T 1n11_A 299 KHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQA----DVNAKTKLGYSPLHQAAQQGHTDIVT 361 (437)
T ss_dssp HHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred hCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCC----CCCCCCCCCCCHHHHHHHCChHHHHH
Confidence 77544 45667778888888888888888888887776 77777878888888888877776665
No 55
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.74 E-value=1.3e-18 Score=161.82 Aligned_cols=134 Identities=16% Similarity=0.055 Sum_probs=106.5
Q ss_pred HHHHhCC----CCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 84 DELVDDR----NPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 84 ~~Ll~~~----a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
++|++++ +++| ..+..|+||+|.++..+. .+.++.|.+... ..+.+|..|+||||+|+..|+.++++.|+
T Consensus 25 ~~Ll~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 98 (236)
T 1ikn_D 25 MEVIRQVKGDLAFLN-FQNNLQQTPLHLAVITNQ--PEIAEALLGAGC---DPELRDFRGNTPLHLACEQGCLASVGVLT 98 (236)
T ss_dssp SCCCC-----CCCCC-CCCTTCCCHHHHHHHTTC--HHHHHCCCSCCC---CSCCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHhhccHHHhh-ccCCCCCCHHHHHHHcCC--HHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4455544 4677 355569999999876543 334555544322 22567789999999999999999999999
Q ss_pred HhCCC-----ccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccC-CCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPV-----AIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDN-LGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~-----~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~-~G~TpLHlAa~~g~~~~~~ 227 (429)
+.+++ .....|..|+||||+|+.+|+.+++++|++.|+ +++.+|. +|+||||+|+..|+.++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~~g~tpL~~A~~~~~~~~v~ 168 (236)
T 1ikn_D 99 QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA----DVNAQEPCNGRTALHLAVDLQNPDLVS 168 (236)
T ss_dssp HSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC----CTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred hcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 98743 256678899999999999999999999999998 8999998 9999999999999988776
No 56
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.73 E-value=2.9e-18 Score=174.08 Aligned_cols=138 Identities=16% Similarity=0.065 Sum_probs=113.8
Q ss_pred HHHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHH
Q 042589 79 AIQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 158 (429)
Q Consensus 79 a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~L 158 (429)
..+++++|++++++++ ..+..|+||+|.+...+... .++.|.+.. ...+.+|..|+||||+|+..|+.++|++|
T Consensus 257 ~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~--~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 330 (437)
T 1n11_A 257 HAEMVALLLSKQANGN-LGNKSGLTPLHLVAQEGHVP--VADVLIKHG---VMVDATTRMGYTPLHVASHYGNIKLVKFL 330 (437)
T ss_dssp CHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHHHTCHH--HHHHHHHHT---CCTTCCCSSCCCHHHHHHHSSCSHHHHHH
T ss_pred CHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCCHH--HHHHHHhCC---ccCCCCCCCCCCHHHHHHHcCcHHHHHHH
Confidence 3689999999999999 35567999999887644332 233232211 11255778999999999999999999999
Q ss_pred HHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 159 LDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 159 l~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++++.+ ++.+|..|+||||+|+.+|+.+++++|++.|+ +++.+|.+|+||||+|+..|+.++++
T Consensus 331 l~~gad-~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga----~~~~~~~~g~t~l~~A~~~g~~~~~~ 394 (437)
T 1n11_A 331 LQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA----SPNEVSSDGTTPLAIAKRLGYISVTD 394 (437)
T ss_dssp HHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CSCCCCSSSCCHHHHHHHTTCHHHHH
T ss_pred HhcCCC-CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcC----CCCCCCCCCCCHHHHHHHcCcHHHHH
Confidence 998766 47789999999999999999999999999998 89999999999999999999966554
No 57
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.73 E-value=2.2e-18 Score=163.49 Aligned_cols=177 Identities=13% Similarity=-0.014 Sum_probs=111.7
Q ss_pred CCCchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCC-----------------
Q 042589 30 LFPSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNP----------------- 92 (429)
Q Consensus 30 ~~~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~----------------- 92 (429)
...|++.+|.. |+.+.++.++ +...........+...++-.... ...+++++|++++++
T Consensus 45 g~t~L~~A~~~-g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 120 (282)
T 1oy3_D 45 GQTALHLAAIL-GEASTVEKLY-AAGAGVLVAERGGHTALHLACRV--RAHTCACVLLQPRPSHPRDASDTYLTQSQDCT 120 (282)
T ss_dssp SCCHHHHHHHH-TCHHHHHHHH-HTTCCSSCCCTTSCCHHHHHTTT--TCHHHHHHHSSSCCSSCCCC------------
T ss_pred CCCHHHHHHHc-CCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHc--CCcchhHhhhccCCCCchhhHHHHhhcccccC
Confidence 56788888887 8888773332 21111111111111112211111 246899999998876
Q ss_pred ------------------------------CCcccccCCCCcccccccCCccccccccCCC-CCCCcccccccCC-CCCC
Q 042589 93 ------------------------------HVYKYVYNGREPRISTFGQDVNAFTARETPP-DPNTYKKKNARRS-RRKE 140 (429)
Q Consensus 93 ------------------------------~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~-~~~~~~~~~~~~d-~~G~ 140 (429)
++ ..+..|+||+|.++..+.. +.++.|. .+.. .+..+ ..|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~g~~----~~~~~~~~g~ 193 (282)
T 1oy3_D 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE-AENYDGHTPLHVAVIHKDA--EMVRLLRDAGAD----LNKPEPTCGR 193 (282)
T ss_dssp -----------------------CCCGGGGTT-CCCTTSCCHHHHHHHTTCH--HHHHHHHHHTCC----TTCCCTTTCC
T ss_pred cchhcchhhhccccccchhhhhhhhhhhhcCC-CcCCCCcCHHHHHHHcCCH--HHHHHHHHcCCC----CCCCCCCCCc
Confidence 44 2455699999988764432 2233332 2222 13344 3599
Q ss_pred cHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHc
Q 042589 141 TPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATY 220 (429)
Q Consensus 141 TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~ 220 (429)
||||+|++.|+.+++++|++++.+ ++.+|..|+||||+|+.+|+.+++++|++.|+ +++.+|.+|.|||++|...
T Consensus 194 tpL~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~a~~~ 268 (282)
T 1oy3_D 194 TPLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHGA----PEPEDGGDKLSPCSSSGSD 268 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTC----CCCCCC-------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC-CcccccCCCCHHHHHHHcCCcHHHHHHHHcCC----CcCcCCCcccccccccCCc
Confidence 999999999999999999998766 57889999999999999999999999999999 8999999999999999887
Q ss_pred CC
Q 042589 221 GD 222 (429)
Q Consensus 221 g~ 222 (429)
.+
T Consensus 269 ~~ 270 (282)
T 1oy3_D 269 SD 270 (282)
T ss_dssp --
T ss_pred cc
Confidence 65
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.73 E-value=1.2e-18 Score=165.96 Aligned_cols=136 Identities=13% Similarity=0.048 Sum_probs=97.4
Q ss_pred HHHHHhCCCCCCc---ccccCCCCcccccccC-CccccccccCCCCC-CCc-------ccccccCCCCCCcHHHHHHHcC
Q 042589 83 FDELVDDRNPHVY---KYVYNGREPRISTFGQ-DVNAFTARETPPDP-NTY-------KKKNARRSRRKETPILVAAKMG 150 (429)
Q Consensus 83 v~~Ll~~~a~~~~---~~d~~G~~P~~~~~~~-~~~~~~~i~ll~~~-~~~-------~~~~~~~d~~G~TpLh~Aa~~G 150 (429)
++++.+.+++++. ..|..|+||+|.++.. .....+.++.|.+. ... +......|..|+||||+|+..|
T Consensus 33 l~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g 112 (273)
T 2pnn_A 33 LPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERR 112 (273)
T ss_dssp HHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTT
T ss_pred HHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcC
Confidence 3455566666541 1255688888877642 11222223222221 100 0001224568999999999999
Q ss_pred cHHHHHHHHHhCCCccccCCC--------------CCCcHHHHHHHcCCHHHHHHHHc---CCCccccccccccCCCCcH
Q 042589 151 VTEMVKKILDTFPVAIWDLDP--------------GEKNVLLLAIENRQTHVYNLLRS---REELGETIFWQVDNLGNSA 213 (429)
Q Consensus 151 ~~eiv~~Ll~~~~~~~~~~d~--------------~G~t~LH~A~~~g~~~iv~~Ll~---~~~~~~~~in~~D~~G~Tp 213 (429)
+.++|++|++++++. +..|. .|+||||+|+.+|+.+++++|++ .++ ++|.+|.+|+||
T Consensus 113 ~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga----d~~~~d~~g~tp 187 (273)
T 2pnn_A 113 NMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA----DISARDSVGNTV 187 (273)
T ss_dssp CHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC----CTTCCCTTSCCH
T ss_pred CHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC----CceeeCCCCCcH
Confidence 999999999987664 55665 79999999999999999999999 777 899999999999
Q ss_pred HHHHHHcCCC
Q 042589 214 LHLAATYGDH 223 (429)
Q Consensus 214 LHlAa~~g~~ 223 (429)
||+|+..|+.
T Consensus 188 Lh~A~~~~~~ 197 (273)
T 2pnn_A 188 LHALVEVADN 197 (273)
T ss_dssp HHHHHHHCCS
T ss_pred HHHHHHccCc
Confidence 9999999883
No 59
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.73 E-value=1.2e-17 Score=145.95 Aligned_cols=125 Identities=14% Similarity=-0.014 Sum_probs=85.1
Q ss_pred HHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCc-HHHHHHHcCcHHHHHHHH
Q 042589 81 QVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKET-PILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 81 ~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~T-pLh~Aa~~G~~eiv~~Ll 159 (429)
+++++|+++|++++ ..+..|+||+|.+.. ...+.++.|.+... ..+.+|..|+| |||+|++.|+.+++++|+
T Consensus 26 ~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~---~~~~~v~~Ll~~g~---~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll 98 (156)
T 1bi7_B 26 EEVRALLEAGANPN-APNSYGRRPIQVMMM---GSARVAELLLLHGA---EPNCADPATLTRPVHDAAREGFLDTLVVLH 98 (156)
T ss_dssp HHHHHHHTTTCCTT-CCCSSSCCTTTSSCT---TCHHHHHHHHTTTC---CCCCCCTTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCC-CCCCCCCCHHHHHHc---CCHHHHHHHHHcCC---CCCCcCCCCCcHHHHHHHHCCCHHHHHHHH
Confidence 45689999999999 455679999998743 23334444433221 22567788998 999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHH
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLA 217 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlA 217 (429)
+++.+ ++.+|..|+||||+|+..|+.+++++|++.|+ +++.+|..|.||.+-+
T Consensus 99 ~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 99 RAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAG----GTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred HcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCC----CCCccCcCcCcccccC
Confidence 98765 47789999999999999999999999999998 8999999999998744
No 60
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.72 E-value=3.4e-18 Score=154.54 Aligned_cols=133 Identities=17% Similarity=0.140 Sum_probs=110.2
Q ss_pred HHHHHHHHHhCCC-CCCcccccCCCCcccccccCCccccccccCCCC-CCCcccccccCCCCCCcHHHHHHHcCcHHHHH
Q 042589 79 AIQVFDELVDDRN-PHVYKYVYNGREPRISTFGQDVNAFTARETPPD-PNTYKKKNARRSRRKETPILVAAKMGVTEMVK 156 (429)
Q Consensus 79 a~~iv~~Ll~~~a-~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~-~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~ 156 (429)
..+.++.|++++. +++ ..|..|.||+|.++..+. .+.++.|.+ +.+ .+..|..|.||||+|+..|+.++++
T Consensus 17 ~~~~v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~~ 89 (201)
T 3hra_A 17 DTKKVKEILQDTTYQVD-EVDTEGNTPLNIAVHNND--IEIAKALIDRGAD----INLQNSISDSPYLYAGAQGRTEILA 89 (201)
T ss_dssp CHHHHHHHHTCTTCCTT-CCCTTSCCHHHHHHHHTC--HHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHcCCCCCC-CCCCCCCCHHHHHHHcCC--HHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 3578888888877 888 456679999998876443 233333332 222 2557788999999999999999999
Q ss_pred HHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCC-CccccccccccCCCCcHHHHHHHcCC
Q 042589 157 KILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSRE-ELGETIFWQVDNLGNSALHLAATYGD 222 (429)
Q Consensus 157 ~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~-~~~~~~in~~D~~G~TpLHlAa~~g~ 222 (429)
.|++.++...+..|..|+||||+|+..|+.+++++|++.+ . +++.+|.+|+||||+|+..++
T Consensus 90 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 90 YMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRE----DIDFQNDFGYTALIEAVGLRE 152 (201)
T ss_dssp HHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCC----CTTCCCTTSCCHHHHHHHSSC
T ss_pred HHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CcCCCCCCCCCHHHHHHHhcc
Confidence 9998777667888999999999999999999999999998 5 899999999999999999887
No 61
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.72 E-value=5.9e-18 Score=144.26 Aligned_cols=88 Identities=16% Similarity=0.096 Sum_probs=78.1
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSAL 214 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpL 214 (429)
+|..|+||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+..|+.+++++|++.++ +++.+|.+|+|||
T Consensus 39 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl 113 (137)
T 3c5r_A 39 KDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGA----SRNAVNIFGLRPV 113 (137)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCGG
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCCHH
Confidence 456799999999999999999999988655 57789999999999999999999999999988 8999999999999
Q ss_pred HHHHHcCCCcccc
Q 042589 215 HLAATYGDHRPWH 227 (429)
Q Consensus 215 HlAa~~g~~~~~~ 227 (429)
|+|+..+..+++.
T Consensus 114 ~~A~~~~~~~~l~ 126 (137)
T 3c5r_A 114 DYTDDESMKSLLL 126 (137)
T ss_dssp GGCCCHHHHHHHS
T ss_pred HHHhhccHHHHHh
Confidence 9998877655544
No 62
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.71 E-value=2e-17 Score=155.68 Aligned_cols=117 Identities=18% Similarity=0.113 Sum_probs=93.4
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ ..+..+..| .+.+..+..|+||||+|+..|+.+++++|+
T Consensus 103 ~~~v~~Ll~~ga~~~-~~~~~~~~~-------------------------~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 156 (256)
T 2etb_A 103 LQCVKLLVENGADVH-LRACGRFFQ-------------------------KHQGTCFYFGELPLSLAACTKQWDVVTYLL 156 (256)
T ss_dssp HHHHHHHHHTTCCTT-CCCCSGGGS-------------------------CCSSSCCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC-ccccccccc-------------------------ccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 678888888888887 111111111 011223446999999999999999999999
Q ss_pred H---hCCCccccCCCCCCcHHHHHHH--cCCHH-------HHHHHHcCCCcccccc-------ccccCCCCcHHHHHHHc
Q 042589 160 D---TFPVAIWDLDPGEKNVLLLAIE--NRQTH-------VYNLLRSREELGETIF-------WQVDNLGNSALHLAATY 220 (429)
Q Consensus 160 ~---~~~~~~~~~d~~G~t~LH~A~~--~g~~~-------iv~~Ll~~~~~~~~~i-------n~~D~~G~TpLHlAa~~ 220 (429)
+ ++.+ ++.+|.+|+||||+|+. +++.+ ++++|++.|+ ++ +.+|.+|+||||+|+..
T Consensus 157 ~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga----~~~~~~~~~~~~d~~g~tpL~~A~~~ 231 (256)
T 2etb_A 157 ENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA----RLCPTVQLEEISNHQGLTPLKLAAKE 231 (256)
T ss_dssp HCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH----HHSTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred hccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCC----CcccccccccccCCCCCCHHHHHHHh
Confidence 9 5444 67889999999999999 88988 9999999988 77 89999999999999999
Q ss_pred CCCcccc
Q 042589 221 GDHRPWH 227 (429)
Q Consensus 221 g~~~~~~ 227 (429)
|+.++++
T Consensus 232 g~~~~v~ 238 (256)
T 2etb_A 232 GKIEIFR 238 (256)
T ss_dssp TCHHHHH
T ss_pred CCHHHHH
Confidence 9977654
No 63
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.71 E-value=1.2e-17 Score=163.20 Aligned_cols=81 Identities=17% Similarity=0.099 Sum_probs=75.5
Q ss_pred ccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCc
Q 042589 133 ARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNS 212 (429)
Q Consensus 133 ~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~T 212 (429)
+.+|..|+||||+|++.|+.+++++|++++.+ ++.+|..|+||||+|+.+|+.+++++|++.|+ +++.+|.+|+|
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----d~~~~~~~g~t 315 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSYGS----DPSIISLQGFT 315 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC----CCCCcCCCCCC
Confidence 56788999999999999999999999988765 57889999999999999999999999999998 89999999999
Q ss_pred HHHHHH
Q 042589 213 ALHLAA 218 (429)
Q Consensus 213 pLHlAa 218 (429)
|||+|.
T Consensus 316 al~~a~ 321 (351)
T 3utm_A 316 AAQMGN 321 (351)
T ss_dssp HHHHSC
T ss_pred hhhhhh
Confidence 999983
No 64
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.71 E-value=3.9e-17 Score=135.74 Aligned_cols=88 Identities=28% Similarity=0.308 Sum_probs=80.3
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSAL 214 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpL 214 (429)
.|..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.+. +++.+|.+|+|||
T Consensus 31 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~g~t~l 105 (126)
T 1n0r_A 31 KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA----DVNAKDKNGRTPL 105 (126)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHH
T ss_pred cCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcChHHHHHHHHHcCC----CCcccCCCCCCHH
Confidence 356799999999999999999999988665 47789999999999999999999999999988 8999999999999
Q ss_pred HHHHHcCCCcccc
Q 042589 215 HLAATYGDHRPWH 227 (429)
Q Consensus 215 HlAa~~g~~~~~~ 227 (429)
|+|+..|+.++++
T Consensus 106 ~~A~~~~~~~~~~ 118 (126)
T 1n0r_A 106 HLAARNGHLEVVK 118 (126)
T ss_dssp HHHHHTTCHHHHH
T ss_pred HHHHHcCcHHHHH
Confidence 9999999876654
No 65
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.70 E-value=5.6e-17 Score=143.34 Aligned_cols=119 Identities=18% Similarity=0.068 Sum_probs=95.4
Q ss_pred CCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHH
Q 042589 101 GREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLA 180 (429)
Q Consensus 101 G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A 180 (429)
+++|+|.++..+. .+.++.+.+.... ..+..|..|+||||+|+..|+.+++++|++++.+ .+..|..|+||||+|
T Consensus 2 ~~~~L~~A~~~g~--~~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 76 (172)
T 3v30_A 2 DSLSIHQLAAQGE--LDQLKEHLRKGDN--LVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSLA 76 (172)
T ss_dssp --CCHHHHHHTTC--HHHHHHHHTTCSG--GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHH
T ss_pred chhhHHHHHHcCC--HHHHHHHHHcCcc--cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHHH
Confidence 4678887765332 2223233222221 1266788999999999999999999999998766 477899999999999
Q ss_pred HHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCccccc
Q 042589 181 IENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 181 ~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~~ 228 (429)
+..|+.+++++|++.+. +++.+|.+|+||||+|+..|+.++++.
T Consensus 77 ~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~v~~ 120 (172)
T 3v30_A 77 STGGYTDIVGLLLERDV----DINIYDWNGGTPLLYAVRGNHVKCVEA 120 (172)
T ss_dssp HHTTCHHHHHHHHTTTC----CTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHCCCHHHHHHHHHcCC----CCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999988 899999999999999999999887763
No 66
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.69 E-value=7.4e-17 Score=152.00 Aligned_cols=118 Identities=20% Similarity=0.158 Sum_probs=93.5
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ ..+.+.. +. ....+..+..|+||||+|+..|+.+++++|+
T Consensus 106 ~~~v~~Ll~~ga~~~--~~~~~~~------------------~~-----~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 106 KHYVELLVEKGADVH--AQARGRF------------------FQ-----PKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HHHHHHHHHTTCCTT--CCCEECC------------------CS-----SSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhCCCCcC--ccccccc------------------cC-----cccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 688999999999888 2211100 00 0001233467999999999999999999999
Q ss_pred H---hCCCccccCCCCCCcHHHHHHHcCC---------HHHHHHHHcCCCcccccc-------ccccCCCCcHHHHHHHc
Q 042589 160 D---TFPVAIWDLDPGEKNVLLLAIENRQ---------THVYNLLRSREELGETIF-------WQVDNLGNSALHLAATY 220 (429)
Q Consensus 160 ~---~~~~~~~~~d~~G~t~LH~A~~~g~---------~~iv~~Ll~~~~~~~~~i-------n~~D~~G~TpLHlAa~~ 220 (429)
+ ++.+ ++.+|..|+||||+|+..++ .+++++|++.|+ ++ +.+|.+|+||||+|+..
T Consensus 161 ~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga----~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 161 ENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCA----KLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp HCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHH----HHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred hccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCc----ccccccchhhcccCCCCCHHHHHHHc
Confidence 9 5444 57889999999999999888 799999999987 66 78999999999999999
Q ss_pred CCCcccc
Q 042589 221 GDHRPWH 227 (429)
Q Consensus 221 g~~~~~~ 227 (429)
|+.++++
T Consensus 236 g~~~~v~ 242 (260)
T 3jxi_A 236 GKIGIFQ 242 (260)
T ss_dssp TCHHHHH
T ss_pred CCHHHHH
Confidence 9977654
No 67
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.69 E-value=1.2e-17 Score=166.87 Aligned_cols=142 Identities=12% Similarity=0.001 Sum_probs=113.8
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcC---cHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMG---VTEMVK 156 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G---~~eiv~ 156 (429)
.+++++|+++|++++ ..+..|+||+|.++..+.. +.++.|.+........+..|..|.||||+|+..| +.++++
T Consensus 179 ~~iv~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~ 255 (373)
T 2fo1_E 179 RRLVAYLMKAGADPT-IYNKSERSALHQAAANRDF--GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAK 255 (373)
T ss_dssp HHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCH--HHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHH
T ss_pred HHHHHHHHHCCCCCc-ccCCCCCCHHHHHHHCCCH--HHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHH
Confidence 689999999999999 4566799999988764432 3344444332111233667889999999999998 899999
Q ss_pred HHHHhCCCcc-------ccCCCCCCcHHHHHHHcCCHHHHHHHHcCC-CccccccccccCCCCcHHHHHHHcCCCccccc
Q 042589 157 KILDTFPVAI-------WDLDPGEKNVLLLAIENRQTHVYNLLRSRE-ELGETIFWQVDNLGNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 157 ~Ll~~~~~~~-------~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~-~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~~ 228 (429)
.|++++.+.. ...|..|+||||+|+..|+.+++++|++.+ . ++|.+|.+|+||||+|+..|+.+++++
T Consensus 256 ~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~----~~n~~d~~g~TpL~~A~~~g~~~iv~~ 331 (373)
T 2fo1_E 256 LLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS----NKDKQDEDGKTPIMLAAQEGRIEVVMY 331 (373)
T ss_dssp HHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC----CTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC----CccCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999976542 135779999999999999999999999876 5 899999999999999999999887763
No 68
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.69 E-value=9.7e-17 Score=143.00 Aligned_cols=119 Identities=16% Similarity=0.137 Sum_probs=93.2
Q ss_pred CCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHH
Q 042589 100 NGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLL 179 (429)
Q Consensus 100 ~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~ 179 (429)
++.+|++.++..+.. +.++.+.+.... ..+..|..|+||||+|+..|+.+++++|++++.+ ++.+|..|+||||+
T Consensus 4 ~~~~~l~~A~~~g~~--~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 4 EFMDDIFTQCREGNA--VAVRLWLDNTEN--DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHL 78 (179)
T ss_dssp ---CCHHHHHHHTCH--HHHHHHHHCTTS--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred HHHHHHHHHHHcCCH--HHHHHHHhcCcc--cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHH
Confidence 356777766543222 222222221111 1256788999999999999999999999998765 57789999999999
Q ss_pred HHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 180 AIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 180 A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
|+..|+.+++++|++.++ ++|.+|.+|+||||+|+..|+.++++
T Consensus 79 A~~~~~~~~v~~Ll~~g~----~~~~~d~~g~t~L~~A~~~~~~~~v~ 122 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKA----DINAVNEHGNVPLHYACFWGQDQVAE 122 (179)
T ss_dssp HHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCC----CCCccCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999998 89999999999999999999987766
No 69
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.69 E-value=3.7e-17 Score=150.92 Aligned_cols=137 Identities=15% Similarity=-0.005 Sum_probs=81.2
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCC-CCCcccccccCCCCCCcHHHHHHHcCcHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPD-PNTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 158 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~-~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~L 158 (429)
.+++++|+++|++++...+..|.||+|.++..+.. +.++.+.+ +.. .+..+..|.||||+|+..|+.++++.|
T Consensus 55 ~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~--~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~~~L 128 (240)
T 3eu9_A 55 IDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHL--SMVVQLMKYGAD----PSLIDGEGCSCIHLAAQFGHTSIVAYL 128 (240)
T ss_dssp HHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCH--HHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCH--HHHHHHHHcCCC----CcccCCCCCCHHHHHHHcCHHHHHHHH
Confidence 56777777777766632333377777766543322 22222222 111 133455677777777777777777777
Q ss_pred HHhCCCccccCCCCCCcHHHHHHHcCC-HHHHHHHHcCCCccccccccccC-CCCcHHHHHHHcCCCcccc
Q 042589 159 LDTFPVAIWDLDPGEKNVLLLAIENRQ-THVYNLLRSREELGETIFWQVDN-LGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 159 l~~~~~~~~~~d~~G~t~LH~A~~~g~-~~iv~~Ll~~~~~~~~~in~~D~-~G~TpLHlAa~~g~~~~~~ 227 (429)
++++.+ .+..|..|+||||+|+..++ .+++++|++.+. +++..|. .|+||||+|+..|+.++++
T Consensus 129 l~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~ 194 (240)
T 3eu9_A 129 IAKGQD-VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNV----SVNLGDKYHKNTALHWAVLAGNTTVIS 194 (240)
T ss_dssp HHTTCC-TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTC----CTTCCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred HhcCCC-ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCC----CcchhhccCCCcHHHHHHHcCCHHHHH
Confidence 766544 35566667777777765544 566666666665 5666665 6667777777776666554
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.69 E-value=1e-16 Score=140.65 Aligned_cols=89 Identities=22% Similarity=0.148 Sum_probs=81.7
Q ss_pred cCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcH
Q 042589 134 RRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSA 213 (429)
Q Consensus 134 ~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~Tp 213 (429)
..+..|+||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+..|+.+++++|++.+. ++|.+|.+|+||
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~ 111 (165)
T 3twr_A 37 DIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVAELLVKHGA----VVNVADLWKFTP 111 (165)
T ss_dssp CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTCCCH
T ss_pred ccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCC----CCCCcCCCCCCH
Confidence 3456799999999999999999999998766 57789999999999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCcccc
Q 042589 214 LHLAATYGDHRPWH 227 (429)
Q Consensus 214 LHlAa~~g~~~~~~ 227 (429)
||+|+..|+.++++
T Consensus 112 L~~A~~~~~~~~v~ 125 (165)
T 3twr_A 112 LHEAAAKGKYEICK 125 (165)
T ss_dssp HHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHH
Confidence 99999999977665
No 71
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.68 E-value=1e-16 Score=152.51 Aligned_cols=118 Identities=23% Similarity=0.161 Sum_probs=93.7
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ ..+.+.. .. ....+..+..|+||||+|+..|+.+++++|+
T Consensus 114 ~~~v~~Ll~~ga~~~--~~~~~~~---~~--------------------~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 168 (273)
T 2pnn_A 114 MTLVTLLVENGADVQ--AAANGDF---FK--------------------KTKGRPGFYFGELPLSLAACTNQLAIVKFLL 168 (273)
T ss_dssp HHHHHHHHHTTCCTT--CCBCSGG---GS--------------------SCSSSCCCCSCBSHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHCCCCcC--ccccccc---cc--------------------cccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 688889999988888 2221110 00 0011334568999999999999999999999
Q ss_pred H---hCCCccccCCCCCCcHHHHHHHcCC---------HHHHHHHHcCCCccccccc-------cccCCCCcHHHHHHHc
Q 042589 160 D---TFPVAIWDLDPGEKNVLLLAIENRQ---------THVYNLLRSREELGETIFW-------QVDNLGNSALHLAATY 220 (429)
Q Consensus 160 ~---~~~~~~~~~d~~G~t~LH~A~~~g~---------~~iv~~Ll~~~~~~~~~in-------~~D~~G~TpLHlAa~~ 220 (429)
+ .+. .++.+|.+|+||||+|+..|+ .+++++|++.|+ ++| .+|.+|+||||+|+..
T Consensus 169 ~~~~~ga-d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga----~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 169 QNSWQPA-DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA----KLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp HCSSCCC-CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH----HHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred hcccCCC-CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhh----hcccccccccccCCCCCCHHHHHHHh
Confidence 9 544 467889999999999999998 899999999987 665 5999999999999999
Q ss_pred CCCcccc
Q 042589 221 GDHRPWH 227 (429)
Q Consensus 221 g~~~~~~ 227 (429)
|+.++++
T Consensus 244 g~~~iv~ 250 (273)
T 2pnn_A 244 GKIGVLA 250 (273)
T ss_dssp TCHHHHH
T ss_pred ChHHHHH
Confidence 9977765
No 72
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.68 E-value=9.6e-17 Score=143.96 Aligned_cols=86 Identities=21% Similarity=0.149 Sum_probs=78.1
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCC-CCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLD-PGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSA 213 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d-~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~Tp 213 (429)
+|..|+||||+|+..|+.+++++|++++.+. +.+| ..|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||
T Consensus 72 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~tp 146 (183)
T 3deo_A 72 VDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEALVELGA----DIEVEDERGLTA 146 (183)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTC----CTTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCC----CCcCCCCCCCCH
Confidence 4568999999999999999999999987664 5566 899999999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCcc
Q 042589 214 LHLAATYGDHRP 225 (429)
Q Consensus 214 LHlAa~~g~~~~ 225 (429)
||+|+..++.+.
T Consensus 147 l~~A~~~~~~~~ 158 (183)
T 3deo_A 147 LELAREILKTTP 158 (183)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHhccCcc
Confidence 999999887554
No 73
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.68 E-value=3.5e-17 Score=151.03 Aligned_cols=105 Identities=12% Similarity=0.053 Sum_probs=94.2
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|++++ .+|..|+||||+||..|+.++|++|+
T Consensus 86 ~~~v~~Ll~~g~~~~---------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll 126 (222)
T 3ehr_A 86 LSWLRECLDNRVGVN---------------------------------------GLDKAGSTALYWACHGGHKDIVEMLF 126 (222)
T ss_dssp HHHHHHHHHTTCCTT---------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHHhCCCCcc---------------------------------------ccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 577899999998887 24568999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+..+..++.+|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+..|+.++++
T Consensus 127 ~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~~~~l~ 190 (222)
T 3ehr_A 127 TQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGA----RTDLRNIEKKLAFDMATNAACASLLK 190 (222)
T ss_dssp TSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC----CSCCCCTTSCCHHHHCCSHHHHHHHC
T ss_pred cCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCccccCCCCCHHHHhcchhHHHHHH
Confidence 88455568899999999999999999999999999998 89999999999999999988876665
No 74
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.67 E-value=3e-17 Score=147.83 Aligned_cols=121 Identities=16% Similarity=0.095 Sum_probs=99.5
Q ss_pred cccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcH
Q 042589 97 YVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNV 176 (429)
Q Consensus 97 ~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~ 176 (429)
.|..|+||+|.++..+..+ .++.+.+.. ...+..|..|+||||+|+..|+.+++++|++++++ ++..|..|+||
T Consensus 31 ~d~~g~t~L~~A~~~g~~~--~v~~Ll~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 104 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMEN--AIDKLVENF---DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKTP 104 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGG--GHHHHHHHH---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHH--HHHHHHHhc---cccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcH
Confidence 4667999999887644322 232222211 12255678899999999999999999999999766 47789999999
Q ss_pred HHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 177 LLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 177 LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
||+|+..|+.+++++|++.++ +++.+|.+|+||||+|+..|+.++++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~v~ 151 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGA----NVNDRNLEGETPLIVASKYGRSEIVK 151 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTC----CSSCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCC----CCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999998 89999999999999999999987766
No 75
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.67 E-value=2.3e-16 Score=151.86 Aligned_cols=91 Identities=12% Similarity=0.073 Sum_probs=83.2
Q ss_pred ccCCCCCCcHHHHHHHc---CcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCC
Q 042589 133 ARRSRRKETPILVAAKM---GVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNL 209 (429)
Q Consensus 133 ~~~d~~G~TpLh~Aa~~---G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~ 209 (429)
+..|..|+||||+||.. |+.+++++|++++.+ ++.+|..|+||||+|+.+|+.+++++|++.|+ ++|.+|.+
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga----d~~~~d~~ 237 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYCCLTDNAECLKLLLRGKA----SIEIANES 237 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTT
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCccCC
Confidence 34567899999999999 999999999999766 57889999999999999999999999999998 89999999
Q ss_pred CCcHHHHHHHcCCCccccc
Q 042589 210 GNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 210 G~TpLHlAa~~g~~~~~~~ 228 (429)
|.||||+|+..|+.+++++
T Consensus 238 g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 238 GETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp SCCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHH
Confidence 9999999999999877653
No 76
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.67 E-value=1.7e-16 Score=155.48 Aligned_cols=182 Identities=15% Similarity=0.081 Sum_probs=106.9
Q ss_pred chHHHHHHhhhHHHHHHHHHHHHHHHHh----cCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCc-------------
Q 042589 33 SDYVKCFLKGIIDLVQEIELNVIWYAIY----AGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVY------------- 95 (429)
Q Consensus 33 ~~y~~c~~~g~~~~~~~~l~~~~~~~~~----~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~------------- 95 (429)
+++.||.+ |++++++.+| +...++.. .|+..+ +-.... -..++|++|+++|++++.
T Consensus 28 ~L~~Av~~-g~~~~V~~LL-~~Gadvn~~~~~~g~TpL---h~A~~~--g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 28 LLIKAVQN-EDVDLVQQLL-EGGANVNFQEEEGGWTPL---HNAVQM--SREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp HHHHHHHT-TCHHHHHHHH-HHTCCTTCCCTTTCCCHH---HHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHc-CCHHHHHHHH-HCCCCCCccCCCCCcCHH---HHHHHc--CCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 67777766 9998884433 33333221 133222 211111 136888999988887651
Q ss_pred -------------------ccccCCCCcccccccCCccccccccCC-CCCCCc------ccccccCCCCCCcHHHHHHHc
Q 042589 96 -------------------KYVYNGREPRISTFGQDVNAFTARETP-PDPNTY------KKKNARRSRRKETPILVAAKM 149 (429)
Q Consensus 96 -------------------~~d~~G~~P~~~~~~~~~~~~~~i~ll-~~~~~~------~~~~~~~d~~G~TpLh~Aa~~ 149 (429)
..|..|+||+|.+...+..+. ++.+ +.+... .......+..|.||||+|++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~--~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~ 178 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA--LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 178 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHH--HHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHH
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHH--HHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHC
Confidence 133446777776554332221 1111 111111 111234566789999999999
Q ss_pred CcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCC----HHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcc
Q 042589 150 GVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQ----THVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRP 225 (429)
Q Consensus 150 G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~----~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~ 225 (429)
|+.++|++||++.+..++.+|..|+|+||.++..++ ..++++|++.|+ ++|.+|.+|+||||+|+..|+.+.
T Consensus 179 g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~ga----d~n~~d~~g~t~L~~a~~~~~~~~ 254 (337)
T 4g8k_A 179 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGA----DVNVRGERGKTPLILAVEKKHLGL 254 (337)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTC----CTTCCCGGGCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCC----CCCCcCCCCCCHHHHHHHhhhhHH
Confidence 999999999976554456677777777777665433 346677777776 677777777777777777777554
Q ss_pred cc
Q 042589 226 WH 227 (429)
Q Consensus 226 ~~ 227 (429)
++
T Consensus 255 v~ 256 (337)
T 4g8k_A 255 VQ 256 (337)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 77
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.66 E-value=1.3e-17 Score=163.90 Aligned_cols=142 Identities=13% Similarity=0.009 Sum_probs=111.0
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCC-CCCCcccccccCCCCCCcHHHHHHHcCc---HHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPP-DPNTYKKKNARRSRRKETPILVAAKMGV---TEMV 155 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~-~~~~~~~~~~~~d~~G~TpLh~Aa~~G~---~eiv 155 (429)
.+++++|+++|+++|...|..|+||||.++..+.. +.++.|. .+.+ .+.+|.+|+||||+|+..|+ .+++
T Consensus 110 ~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~--~~v~~Ll~~Gad----~n~~d~~g~TpLh~A~~~g~~~~~~~~ 183 (327)
T 1sw6_A 110 QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANL--ELVKHLVKHGSN----RLYGDNMGESCLVKAVKSVNNYDSGTF 183 (327)
T ss_dssp HHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCH--HHHHHHHHTTCC----TTBCCTTCCCHHHHHHHSSHHHHTTCH
T ss_pred HHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCH--HHHHHHHHcCCC----CCCcCCCCCCHHHHHHHhcccccHHHH
Confidence 57889999999999922467799999998775543 3344443 3332 25678899999999999999 7888
Q ss_pred HHHHHhCCCccccCCCCCCcHHHHHHH----cCCHHHHHHHHcCCCc--------------------c------------
Q 042589 156 KKILDTFPVAIWDLDPGEKNVLLLAIE----NRQTHVYNLLRSREEL--------------------G------------ 199 (429)
Q Consensus 156 ~~Ll~~~~~~~~~~d~~G~t~LH~A~~----~g~~~iv~~Ll~~~~~--------------------~------------ 199 (429)
+.|++.....++.+|..|+||||+|+. .|+.+++++|++.+.. .
T Consensus 184 ~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~ 263 (327)
T 1sw6_A 184 EALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSIL 263 (327)
T ss_dssp HHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHH
T ss_pred HHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhH
Confidence 888877655578889999999999999 8999999999876320 0
Q ss_pred ---------ccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 200 ---------ETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 200 ---------~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
+.++|.+|.+|+||||+|+..|+.++++
T Consensus 264 ~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~ 300 (327)
T 1sw6_A 264 ENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVD 300 (327)
T ss_dssp HHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 0047888999999999999999977765
No 78
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=1.2e-16 Score=131.46 Aligned_cols=90 Identities=19% Similarity=0.199 Sum_probs=79.8
Q ss_pred ccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCc
Q 042589 133 ARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNS 212 (429)
Q Consensus 133 ~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~T 212 (429)
...|.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++.++ +++.+|.+|+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~t 92 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA----DVXAQDKFGKT 92 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCC
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CccccccCCCc
Confidence 45677899999999999999999999988665 57789999999999999999999999999998 89999999999
Q ss_pred HHHHHHHcCCCcccc
Q 042589 213 ALHLAATYGDHRPWH 227 (429)
Q Consensus 213 pLHlAa~~g~~~~~~ 227 (429)
|||+|+..|+.++++
T Consensus 93 pl~~A~~~~~~~~~~ 107 (110)
T 2zgd_A 93 AFDISIDNGNEDLAE 107 (110)
T ss_dssp HHHHHHHHTCHHHHH
T ss_pred HHHHHHHcCCHHHHH
Confidence 999999999976653
No 79
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.66 E-value=1.9e-16 Score=146.14 Aligned_cols=136 Identities=15% Similarity=0.000 Sum_probs=106.9
Q ss_pred HHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 042589 81 QVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILD 160 (429)
Q Consensus 81 ~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~ 160 (429)
+++++|+++|++++ ..+..|.||+|.++..+.. +.++.+.+..... ....+..|.||||+|+..|+.++++.|++
T Consensus 23 ~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~~~~~--~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~ 97 (240)
T 3eu9_A 23 ERCRELVEAGYDVR-QPDKENVTLLHWAAINNRI--DLVKYYISKGAIV--DQLGGDLNSTPLHWATRQGHLSMVVQLMK 97 (240)
T ss_dssp HHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCT--TCCBTTTTBCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcC-CCCCCCCCHHHHHHHhCCH--HHHHHHHHcCCcc--hhhcCCcCCChhHHHHHcCCHHHHHHHHH
Confidence 45589999999998 4566799999988764433 2233333221111 12334569999999999999999999998
Q ss_pred hCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCC-Cccc
Q 042589 161 TFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGD-HRPW 226 (429)
Q Consensus 161 ~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~-~~~~ 226 (429)
.+.+ .+..|..|+||||+|+..|+.+++++|++.+. +++.+|.+|.||||+|+..++ .+++
T Consensus 98 ~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~----~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 98 YGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ----DVDMMDQNGMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHHCCSSTTH
T ss_pred cCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCC----CccccCCCCCcHHHHHHHhCChHHHH
Confidence 8655 46789999999999999999999999999988 899999999999999998877 3443
No 80
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.66 E-value=1.2e-16 Score=140.46 Aligned_cols=118 Identities=17% Similarity=0.053 Sum_probs=97.1
Q ss_pred CCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHH
Q 042589 100 NGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLL 179 (429)
Q Consensus 100 ~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~ 179 (429)
+|.||+|.++..+. .+.++.+.+.. ...+..|..|+||||+|+..|+.++++.|++++.+ .+..|..|+||||+
T Consensus 2 ~~~t~L~~A~~~g~--~~~v~~ll~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLAAQGE--MLYLATRIEQE---NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSL 75 (167)
T ss_dssp TTCCCHHHHHHTTC--HHHHHHHHHHS---SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred CCcchHHHHHHCCC--HHHHHHHHHcC---CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHH
Confidence 58899998876443 22232222211 11366788999999999999999999999998655 47789999999999
Q ss_pred HHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 180 AIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 180 A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
|+..|+.+++++|++.+. +++.+|.+|+||||+|+..|+.++++
T Consensus 76 A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~v~ 119 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGV----DVNEYDWNGGTPLLYAVHGNHVKCVK 119 (167)
T ss_dssp HHHHTCHHHHHHHHHHTC----CTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHCCC----CCCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999988 89999999999999999999988776
No 81
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.65 E-value=7.6e-17 Score=155.21 Aligned_cols=132 Identities=11% Similarity=0.035 Sum_probs=91.3
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCC-CCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPP-DPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 158 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~-~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~L 158 (429)
.+++++|+++|++++ .. +|+||+|.++..+..+ .++.|. .+.+ .+.+|..|+||||+|+..|+.+++++|
T Consensus 44 ~~~v~~Ll~~g~~~~--~~-~g~t~L~~A~~~g~~~--~v~~Ll~~ga~----~~~~d~~g~t~L~~A~~~g~~~~v~~L 114 (285)
T 3kea_A 44 VRLVCTLLNAGALKN--LL-ENEFPLHQAATLEDTK--IVKILLFSGLD----DSQFDDKGNTALYYAVDSGNMQTVKLF 114 (285)
T ss_dssp HHHHHHHHHTTGGGS--CC-TTCCHHHHHTTSSSCH--HHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhCCCCCC--CC-CCCCHHHHHHHcCCHH--HHHHHHHCCCC----CCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 578888888888877 33 4788888776544322 233332 2222 245667788888888888888888888
Q ss_pred HHhCCCccccCCCCC-CcHHHHHHHcCCHHHHHHHHcCCCccccccccccC-CCCcHHHHHHHcCCCcccc
Q 042589 159 LDTFPVAIWDLDPGE-KNVLLLAIENRQTHVYNLLRSREELGETIFWQVDN-LGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 159 l~~~~~~~~~~d~~G-~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~-~G~TpLHlAa~~g~~~~~~ 227 (429)
++++.+ ++..|..| +||||+|+..|+.+++++|++.+. .. .|. +|.||||+|+..|+.++++
T Consensus 115 l~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~----~~--~~~~~g~t~L~~A~~~g~~~~v~ 178 (285)
T 3kea_A 115 VKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP----ST--FDLAILLSCIHITIKNGHVDMMI 178 (285)
T ss_dssp HHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC----TT--CCCSTHHHHHHHHHHTTCHHHHH
T ss_pred HhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC----cc--ccccCCccHHHHHHHcChHHHHH
Confidence 877555 46677777 688888888888888888888776 22 222 7788888888888866654
No 82
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.65 E-value=1.8e-17 Score=158.94 Aligned_cols=138 Identities=17% Similarity=0.116 Sum_probs=109.8
Q ss_pred HHHHHHHHhCCCC--CCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHH-----HcCcH
Q 042589 80 IQVFDELVDDRNP--HVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAA-----KMGVT 152 (429)
Q Consensus 80 ~~iv~~Ll~~~a~--~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa-----~~G~~ 152 (429)
++.++.|++++.+ +| ..|.+|+||+|.++..+.. +.++.|.+.... ..+..|..|+||||+|+ ..|+.
T Consensus 89 ~~~~~~l~~~~~~~~~n-~~d~~g~T~Lh~A~~~g~~--~~v~~Ll~~g~~--~~~~~~~~g~tpL~~a~~~~~~~~~~~ 163 (276)
T 4hbd_A 89 LVTFRAMSARLLDYVVN-IADSNGNTALHYSVSHANF--PVVQQLLDSGVC--KVDKQNRAGYSPIMLTALATLKTQDDI 163 (276)
T ss_dssp HHHHHHHCHHHHHHHHT-CCCTTSCCHHHHHHHTTCH--HHHHHHHHTSCC--CTTCCCTTSCCHHHHGGGCCCCSHHHH
T ss_pred HHHHHHHHHHHHhhcCc-CCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCC--cCCCCCCCCCCHHHHHHHHHhhhhhhH
Confidence 4667777776655 55 3566799999998764443 334333332221 12567889999999999 77999
Q ss_pred HHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 153 EMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 153 eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
++++.|++.+.. ....|..|+||||+|+.+|+.+++++|++.|+ ++|.+|.+|+||||+|+..|+.++++
T Consensus 164 ~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga----d~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 164 ETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEA----DVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp HHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCC----CCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 999999988644 46678899999999999999999999999998 89999999999999999999988776
No 83
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.65 E-value=3.6e-16 Score=153.27 Aligned_cols=86 Identities=26% Similarity=0.289 Sum_probs=76.4
Q ss_pred cCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcH
Q 042589 134 RRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSA 213 (429)
Q Consensus 134 ~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~Tp 213 (429)
.+|.+|+||||+|+..|+.++++.|++..+..++.+|.+|+||||+|+++|+.++|++|++.|+ ++|. .||
T Consensus 234 ~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA----d~n~-----~~~ 304 (337)
T 4g8k_A 234 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA----STDC-----GDL 304 (337)
T ss_dssp CCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC----SSTT-----CCH
T ss_pred CcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCC-----CCH
Confidence 4567899999999999999999999987666678899999999999999999999999999998 6654 469
Q ss_pred HHHHHHcCCCccccc
Q 042589 214 LHLAATYGDHRPWHT 228 (429)
Q Consensus 214 LHlAa~~g~~~~~~~ 228 (429)
||+|+..|+.+++++
T Consensus 305 L~~A~~~~~~~iv~~ 319 (337)
T 4g8k_A 305 VMTARRNYDHSLVKV 319 (337)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHH
Confidence 999999999888774
No 84
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.65 E-value=1.3e-16 Score=149.07 Aligned_cols=87 Identities=13% Similarity=-0.019 Sum_probs=73.6
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCcccccccccc-CCCCcH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVD-NLGNSA 213 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D-~~G~Tp 213 (429)
+|..|+||||+||..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|+ +++.+| .+|+||
T Consensus 50 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga----~~~~~~~~~g~tp 124 (229)
T 2vge_A 50 PNEEGITALHNAICGANYSIVDFLITAGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGA----AIFATTLSDGATA 124 (229)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC----CTTCCCSSTTCCT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CcccccCCCCCCH
Confidence 456799999999999999999999988655 47788899999999999999999999999888 788886 599999
Q ss_pred HHHH--HHcCCCccc
Q 042589 214 LHLA--ATYGDHRPW 226 (429)
Q Consensus 214 LHlA--a~~g~~~~~ 226 (429)
||+| +..|+.+++
T Consensus 125 L~~A~a~~~~~~~~v 139 (229)
T 2vge_A 125 FEKCDPYREGYADCA 139 (229)
T ss_dssp GGGCCTTSTTHHHHH
T ss_pred HHHHHHHhcChHHHH
Confidence 9998 777775544
No 85
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.65 E-value=3.9e-16 Score=135.46 Aligned_cols=89 Identities=17% Similarity=0.080 Sum_probs=82.2
Q ss_pred ccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCc
Q 042589 133 ARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNS 212 (429)
Q Consensus 133 ~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~T 212 (429)
+..|..|+||||+ |..|+.++++.|++++.+ ++.+|..|+||||+|+..|+.+++++|++.|. +++.+|.+|+|
T Consensus 30 ~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t 103 (156)
T 1bd8_A 30 DALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGA----DVNVPDGTGAL 103 (156)
T ss_dssp TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CSCCCCTTSCC
T ss_pred cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC----CCCCcCCCCCc
Confidence 5677899999999 999999999999998665 57789999999999999999999999999998 89999999999
Q ss_pred HHHHHHHcCCCcccc
Q 042589 213 ALHLAATYGDHRPWH 227 (429)
Q Consensus 213 pLHlAa~~g~~~~~~ 227 (429)
|||+|+..|+.++++
T Consensus 104 ~L~~A~~~~~~~~v~ 118 (156)
T 1bd8_A 104 PIHLAVQEGHTAVVS 118 (156)
T ss_dssp HHHHHHHHTCHHHHH
T ss_pred HHHHHHHhChHHHHH
Confidence 999999999977765
No 86
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.65 E-value=2.3e-16 Score=134.26 Aligned_cols=88 Identities=22% Similarity=0.110 Sum_probs=81.7
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSAL 214 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpL 214 (429)
+|.+|+||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.+. +++.+|.+|+|||
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~g~t~L 80 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKA----LVNTTGYQNDSPL 80 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCGGGCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----cccCcCCCCCCHH
Confidence 567899999999999999999999998665 47789999999999999999999999999998 8999999999999
Q ss_pred HHHHHcCCCcccc
Q 042589 215 HLAATYGDHRPWH 227 (429)
Q Consensus 215 HlAa~~g~~~~~~ 227 (429)
|+|+..|+.++++
T Consensus 81 ~~A~~~~~~~~v~ 93 (137)
T 3c5r_A 81 HDAAKNGHVDIVK 93 (137)
T ss_dssp HHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHH
Confidence 9999999987765
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.65 E-value=2e-17 Score=144.40 Aligned_cols=121 Identities=12% Similarity=0.020 Sum_probs=96.7
Q ss_pred cccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCc-
Q 042589 97 YVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKN- 175 (429)
Q Consensus 97 ~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t- 175 (429)
.+..|.||+|.++..+.. +.++.+.+... ..+..|..|+||||+|+ .|+.+++++|++++.+ ++.+|..|+|
T Consensus 8 ~~~~~~t~L~~A~~~g~~--~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~tt 80 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRV--EEVRALLEAGA---NPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTR 80 (156)
T ss_dssp --CCSTTHHHHHHHHTCH--HHHHHHHTTTC---CTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCC
T ss_pred CCccchHHHHHHHHcCCH--HHHHHHHHcCC---CCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcH
Confidence 345699999988764432 23333332211 22567789999999985 9999999999988655 5778999999
Q ss_pred HHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCccccc
Q 042589 176 VLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 176 ~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~~ 228 (429)
|||+|+..|+.+++++|++.++ +++.+|.+|+||||+|+..|+.++++.
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGA----RLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTC----CSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCC----CCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 9999999999999999999988 899999999999999999999877653
No 88
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.64 E-value=1.3e-16 Score=139.15 Aligned_cols=155 Identities=10% Similarity=-0.046 Sum_probs=109.9
Q ss_pred CchHHHHHHhhhHHHHHHHHHHHHHHHHhcCchhhHhHHHhhhhchhHHHHHHHHHhCCCCCCcccccCCCCcccccccC
Q 042589 32 PSDYVKCFLKGIIDLVQEIELNVIWYAIYAGIRGIKNVREKKETHTWAIQVFDELVDDRNPHVYKYVYNGREPRISTFGQ 111 (429)
Q Consensus 32 ~~~y~~c~~~g~~~~~~~~l~~~~~~~~~~g~~~i~~i~~~k~~h~~a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~ 111 (429)
.|++.+|.. |+.+.++.++ +...........+...++-... ...+++++|+++|++++ ..+..|.||+|.++..
T Consensus 7 ~~L~~A~~~-g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~---~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 7 NELASAAAR-GDLEQLTSLL-QNNVNVNAQNGFGRTALQVMKL---GNPEIARRLLLRGANPD-LKDRTGFAVIHDAARA 80 (162)
T ss_dssp HHHHHHHHH-TCHHHHHHHT-TSCCCTTCCCTTSCCHHHHCCS---SCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHH
T ss_pred hHHHHHHHc-CCHHHHHHHH-hCCCCccccCccCccHHHHHHc---CcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHc
Confidence 367777777 8898884443 1111111111111222222222 35799999999999999 4566799999988764
Q ss_pred CccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHH
Q 042589 112 DVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNL 191 (429)
Q Consensus 112 ~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~ 191 (429)
+.. +.++.+.+.. ...+.+|.+|+||||+|++.|+.+++++|++++++..+..|..|+||||+|+..|+.+++++
T Consensus 81 ~~~--~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 155 (162)
T 1ihb_A 81 GFL--DTLQTLLEFQ---ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSL 155 (162)
T ss_dssp TCH--HHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCH--HHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 432 2233333221 12256788999999999999999999999999888778889999999999999999999999
Q ss_pred HHcCCC
Q 042589 192 LRSREE 197 (429)
Q Consensus 192 Ll~~~~ 197 (429)
|++.|+
T Consensus 156 Ll~~GA 161 (162)
T 1ihb_A 156 MQANGA 161 (162)
T ss_dssp HHHTC-
T ss_pred HHHhCC
Confidence 999986
No 89
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.64 E-value=6.1e-16 Score=145.52 Aligned_cols=85 Identities=20% Similarity=0.121 Sum_probs=77.0
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCC-CCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLD-PGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSA 213 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d-~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~Tp 213 (429)
+|..|+||||+||..|+.++|++|++++.+. +.+| ..|+||||+|+.+|+.+++++|++.|+ ++|.+|.+|+||
T Consensus 73 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----~~~~~d~~g~t~ 147 (244)
T 3ui2_A 73 VDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEALVELGA----DIEVEDERGLTA 147 (244)
T ss_dssp BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTCCCH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCCCCCCCcH
Confidence 5668999999999999999999999987765 5566 789999999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCc
Q 042589 214 LHLAATYGDHR 224 (429)
Q Consensus 214 LHlAa~~g~~~ 224 (429)
||+|+..++..
T Consensus 148 l~~A~~~~~~~ 158 (244)
T 3ui2_A 148 LELAREILKTT 158 (244)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhcc
Confidence 99999876643
No 90
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.63 E-value=2.3e-16 Score=130.15 Aligned_cols=89 Identities=28% Similarity=0.266 Sum_probs=81.5
Q ss_pred cCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcH
Q 042589 134 RRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSA 213 (429)
Q Consensus 134 ~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~Tp 213 (429)
.+|++|+||||+|+..|+.++++.|++++.+ ++..|..|+||||+|+..|+.+++++|++.++ +++.+|.+|+||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~----~~~~~d~~g~tp 78 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA----DVNARSKDGNTP 78 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC----CTTCCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC----CCcccCCCCCCH
Confidence 3577899999999999999999999988766 57789999999999999999999999999988 899999999999
Q ss_pred HHHHHHcCCCcccc
Q 042589 214 LHLAATYGDHRPWH 227 (429)
Q Consensus 214 LHlAa~~g~~~~~~ 227 (429)
||+|+..|+.++++
T Consensus 79 l~~A~~~~~~~~~~ 92 (115)
T 2l6b_A 79 EHLAKKNGHHEIVK 92 (115)
T ss_dssp THHHHTTTCHHHHH
T ss_pred HHHHHHCCCHHHHH
Confidence 99999999977665
No 91
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.63 E-value=3.4e-16 Score=146.17 Aligned_cols=89 Identities=20% Similarity=0.112 Sum_probs=82.2
Q ss_pred cCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcH
Q 042589 134 RRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSA 213 (429)
Q Consensus 134 ~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~Tp 213 (429)
..+.+|.||||+||..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|+ ++|.+|.+|+||
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga----~~n~~d~~g~tp 90 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGA----NVNSPDSHGWTP 90 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTCCCH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCCCCCCCCH
Confidence 3456789999999999999999999998765 47789999999999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCcccc
Q 042589 214 LHLAATYGDHRPWH 227 (429)
Q Consensus 214 LHlAa~~g~~~~~~ 227 (429)
||+|+..|+.++++
T Consensus 91 Lh~A~~~g~~~~v~ 104 (229)
T 2vge_A 91 LHCAASCNDTVICM 104 (229)
T ss_dssp HHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHH
Confidence 99999999988776
No 92
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.63 E-value=2.1e-16 Score=147.92 Aligned_cols=118 Identities=14% Similarity=0.024 Sum_probs=79.7
Q ss_pred cCCCCcccccccCCcccccccc-CCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHH
Q 042589 99 YNGREPRISTFGQDVNAFTARE-TPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVL 177 (429)
Q Consensus 99 ~~G~~P~~~~~~~~~~~~~~i~-ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~L 177 (429)
.+|.||+|.+...+... .++ +++.+.+.. .+..|.||||.|+..|+.++++.|++.+++ ++.+|..|+|||
T Consensus 3 ~~g~t~L~~a~~~~~~~--~~~~ll~~g~~~~-----~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L 74 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRK--TGSERIAHGMRVK-----FNPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITAL 74 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHH
T ss_pred ccccccCchhhhhhhHH--HHHHHhccCCCcc-----cCchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHH
Confidence 35999999887643332 232 333333322 235789999999999999999999988765 578899999999
Q ss_pred HHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCccccc
Q 042589 178 LLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 178 H~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~~ 228 (429)
|+|+.+|+.+++++|++.++ ++|.+|.+|+||||+|+..|+.+++++
T Consensus 75 ~~A~~~g~~~~v~~Ll~~ga----~~~~~d~~g~tpL~~A~~~~~~~~v~~ 121 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFGV----NVNAADSDGWTPLHCAASCNNVQVCKF 121 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHTC----CTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCC----CCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999999988 899999999999999999999887763
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.63 E-value=7e-16 Score=150.15 Aligned_cols=88 Identities=17% Similarity=0.119 Sum_probs=75.6
Q ss_pred CCCCCCcHHHHHHHc---CcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCC
Q 042589 135 RSRRKETPILVAAKM---GVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGN 211 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~---G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~ 211 (429)
.+..|+||||+|+.. |+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|+
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga----d~~~~d~~G~ 260 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALHYAALYNQPDCLKLLLKGRA----LVGTVNEAGE 260 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CCSCCCTTSC
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCC
Confidence 456789999999987 889999999988665 47788899999999999999999999999888 8889999999
Q ss_pred cHHHHHHHcCCCcccc
Q 042589 212 SALHLAATYGDHRPWH 227 (429)
Q Consensus 212 TpLHlAa~~g~~~~~~ 227 (429)
||||+|+..|+.++++
T Consensus 261 TpL~~A~~~~~~~iv~ 276 (301)
T 2b0o_E 261 TALDIARKKHHKECEE 276 (301)
T ss_dssp CHHHHHHHHTCHHHHH
T ss_pred CHHHHHHHcCCHHHHH
Confidence 9999999998866554
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.63 E-value=5.2e-16 Score=129.70 Aligned_cols=87 Identities=16% Similarity=0.034 Sum_probs=78.8
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHH
Q 042589 136 SRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALH 215 (429)
Q Consensus 136 d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLH 215 (429)
+..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.++ ++|.+|.+|+||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGA----DINAPDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTC----CTTCCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCCcCCCCCCCHHH
Confidence 34689999999999999999999998766 57789999999999999999999999999998 89999999999999
Q ss_pred HHHHcCCCcccc
Q 042589 216 LAATYGDHRPWH 227 (429)
Q Consensus 216 lAa~~g~~~~~~ 227 (429)
+|+..|+.++++
T Consensus 79 ~A~~~~~~~~v~ 90 (123)
T 3aaa_C 79 SAVYEGHVSCVK 90 (123)
T ss_dssp HHHHHTCHHHHH
T ss_pred HHHHcCCHHHHH
Confidence 999999977765
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.62 E-value=1e-15 Score=153.25 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=95.6
Q ss_pred HHHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHH
Q 042589 79 AIQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 158 (429)
Q Consensus 79 a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~L 158 (429)
.+++++.|+++|+++| . ...+..|.||||+|+..|+.+++++|
T Consensus 212 ~~~~v~~LL~~Gadvn--~-----------------------------------~~~~~~g~TpLh~Aa~~g~~~iv~~L 254 (368)
T 3jue_A 212 SLPTMADALAHGADVN--W-----------------------------------VNGGQDNATPLIQATAANSLLACEFL 254 (368)
T ss_dssp CHHHHHHHHHTTCCTT--C-----------------------------------CCTTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCC--c-----------------------------------cccccCCCCHHHHHHHCCCHHHHHHH
Confidence 4788999999999988 1 00125799999999999999999999
Q ss_pred HHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCccccc
Q 042589 159 LDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 159 l~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~~ 228 (429)
++++.+ ++..|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+..|+.+++.+
T Consensus 255 L~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Ga----d~~~~d~~G~TpL~~A~~~g~~~iv~l 319 (368)
T 3jue_A 255 LQNGAN-VNQADSAGRGPLHHATILGHTGLACLFLKRGA----DLGARDSEGRDPLTIAMETANADIVTL 319 (368)
T ss_dssp HHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHcCCC-CCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcC----CCCCcCCCCCCHHHHHHHCCCHHHHHH
Confidence 998665 57889999999999999999999999999998 899999999999999999999777653
No 96
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.62 E-value=7e-16 Score=160.27 Aligned_cols=112 Identities=14% Similarity=0.059 Sum_probs=96.1
Q ss_pred HHHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHH---cCcHHHH
Q 042589 79 AIQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAK---MGVTEMV 155 (429)
Q Consensus 79 a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~---~G~~eiv 155 (429)
.++.++.|+++|+++| .... ....|..|+||||+|++ .|+.++|
T Consensus 144 ~~~~v~~ll~~g~~~n--~~~~-------------------------------~~~~~~~g~t~Lh~A~~~a~~g~~~~v 190 (497)
T 3lvq_E 144 DLLSVLEAFANGQDFG--QPLP-------------------------------GPDAQAPEELVLHLAVKVANQASLPLV 190 (497)
T ss_dssp CHHHHHHHHHTTCCSS--SCBC-------------------------------CSSSCCSCBCHHHHHHHTCCTTTHHHH
T ss_pred CHHHHHHHHhhccccc--CCCC-------------------------------CcccccccchHHHHHHHhcccccHHHH
Confidence 3678899999999998 1000 01235689999999966 9999999
Q ss_pred HHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCccccc
Q 042589 156 KKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWHT 228 (429)
Q Consensus 156 ~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~~ 228 (429)
++|++++.+ ++.+|.+|+||||+|+.+|+.+++++|++.|+ ++|.+|.+|+||||+|+..|+.+++++
T Consensus 191 ~~Ll~~ga~-vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga----~~~~~d~~g~tpl~~A~~~~~~~~~~~ 258 (497)
T 3lvq_E 191 DFIIQNGGH-LDAKAADGNTALHYAALYNQPDCLKLLLKGRA----LVGTVNEAGETALDIARKKHHKECEEL 258 (497)
T ss_dssp HHHHHHSCC-TTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCC----CCSCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 999998766 57889999999999999999999999999998 899999999999999999999887764
No 97
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.60 E-value=1.5e-15 Score=131.63 Aligned_cols=88 Identities=16% Similarity=0.102 Sum_probs=81.3
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSAL 214 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpL 214 (429)
.+..|.||||+|+..|+.+++++|++.+.+ ++..|..|+||||+|+..|+.+++++|++.+. +++.+|.+|+|||
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~L 104 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEGHANIVEVLLKHGA----DVNAKDMLKMTAL 104 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC----CTTCCCTTSCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHHcCC----CCCCCCCCCCCHH
Confidence 467899999999999999999999988665 47789999999999999999999999999988 8999999999999
Q ss_pred HHHHHcCCCcccc
Q 042589 215 HLAATYGDHRPWH 227 (429)
Q Consensus 215 HlAa~~g~~~~~~ 227 (429)
|+|+..|+.++++
T Consensus 105 ~~A~~~~~~~~v~ 117 (153)
T 1awc_B 105 HWATEHNHQEVVE 117 (153)
T ss_dssp HHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHH
Confidence 9999999977765
No 98
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.60 E-value=3.8e-16 Score=133.07 Aligned_cols=90 Identities=17% Similarity=0.045 Sum_probs=82.5
Q ss_pred ccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCC-CC
Q 042589 133 ARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNL-GN 211 (429)
Q Consensus 133 ~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~-G~ 211 (429)
+..|..|.||||+|++.|+.+++++|++++.+ ++.+|..|+||||+|+. |+.+++++|++.++ +++.+|.+ |+
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~----~~~~~~~~~g~ 79 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGA----EPNCADPATLT 79 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTC----CSSCCBTTTTB
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCC----CCCCcCCCCCC
Confidence 55678899999999999999999999998655 57789999999999999 99999999999988 89999999 99
Q ss_pred cHHHHHHHcCCCccccc
Q 042589 212 SALHLAATYGDHRPWHT 228 (429)
Q Consensus 212 TpLHlAa~~g~~~~~~~ 228 (429)
||||+|+..|+.+++++
T Consensus 80 t~L~~A~~~~~~~~v~~ 96 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVV 96 (136)
T ss_dssp CHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHH
Confidence 99999999999887663
No 99
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.59 E-value=2.7e-15 Score=132.46 Aligned_cols=90 Identities=23% Similarity=0.188 Sum_probs=82.7
Q ss_pred ccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCc
Q 042589 133 ARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNS 212 (429)
Q Consensus 133 ~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~T 212 (429)
+.+|..|.||||+|+..|+.+++++|++++.+ .+..|..|+||||+|+..|+.+++++|++.++ +++.+|.+|+|
T Consensus 41 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~g~t 115 (169)
T 2y1l_E 41 NAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGA----DVNANDMEGHT 115 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCC
Confidence 55778999999999999999999999998655 47789999999999999999999999999998 89999999999
Q ss_pred HHHHHHHcCCCcccc
Q 042589 213 ALHLAATYGDHRPWH 227 (429)
Q Consensus 213 pLHlAa~~g~~~~~~ 227 (429)
|||+|+..|+.++++
T Consensus 116 ~L~~A~~~~~~~~v~ 130 (169)
T 2y1l_E 116 PLHLAAMFGHLEIVE 130 (169)
T ss_dssp HHHHHHHTTCHHHHH
T ss_pred HHHHHHHcCCHHHHH
Confidence 999999999977765
No 100
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.58 E-value=1.6e-15 Score=129.14 Aligned_cols=87 Identities=22% Similarity=0.192 Sum_probs=79.9
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHH
Q 042589 136 SRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALH 215 (429)
Q Consensus 136 d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLH 215 (429)
...|.||||+||..|+.++++.|++++.+ ++.+|..|+||||+|+.+|+.+++++|++.++ ++|.+|.+|+||||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~d~~g~t~L~ 85 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA----DVNAVDAIGFTPLH 85 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTCCCHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCcCCCCCCCHHH
Confidence 34689999999999999999999998766 57789999999999999999999999999988 89999999999999
Q ss_pred HHHHcCCCcccc
Q 042589 216 LAATYGDHRPWH 227 (429)
Q Consensus 216 lAa~~g~~~~~~ 227 (429)
+|+..|+.++++
T Consensus 86 ~A~~~~~~~~v~ 97 (136)
T 2jab_A 86 LAAFIGHLEIAE 97 (136)
T ss_dssp HHHHHTCHHHHH
T ss_pred HHHHcCCHHHHH
Confidence 999999977765
No 101
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.57 E-value=4.8e-15 Score=122.97 Aligned_cols=85 Identities=29% Similarity=0.296 Sum_probs=78.8
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHH
Q 042589 138 RKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLA 217 (429)
Q Consensus 138 ~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlA 217 (429)
+|+||||+|++.|+.+++++|++.+++ ++..|..|+||||+|+..++.+++++|++.+. +++.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA----DVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC----CCcccCCCCCcHHHHH
Confidence 489999999999999999999998766 46789999999999999999999999999988 8999999999999999
Q ss_pred HHcCCCcccc
Q 042589 218 ATYGDHRPWH 227 (429)
Q Consensus 218 a~~g~~~~~~ 227 (429)
+..|+.++++
T Consensus 76 ~~~~~~~~~~ 85 (126)
T 1n0r_A 76 ARNGHLEVVK 85 (126)
T ss_dssp HHTTCHHHHH
T ss_pred HHcChHHHHH
Confidence 9999977665
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.57 E-value=1.6e-15 Score=147.58 Aligned_cols=130 Identities=9% Similarity=-0.017 Sum_probs=92.7
Q ss_pred HHHHHHHHhCCCCCCcc-----cccCCCCcccccccCC-ccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHH
Q 042589 80 IQVFDELVDDRNPHVYK-----YVYNGREPRISTFGQD-VNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTE 153 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~-----~d~~G~~P~~~~~~~~-~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~e 153 (429)
++.++.|+++|++++.. .+..|+||+|.++... ....+.+++|.+... +.+.+|.+|+||||+|+..|+.+
T Consensus 164 ~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga---dvn~~d~~G~TpLh~A~~~g~~~ 240 (301)
T 2b0o_E 164 LLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG---HLDAKAADGNTALHYAALYNQPD 240 (301)
T ss_dssp HHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS---CTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC---CCCCCCCCCCCHHHHHHHcCCHH
Confidence 44567778888888721 2556888888876531 122333333332211 12557789999999999999999
Q ss_pred HHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCC
Q 042589 154 MVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDH 223 (429)
Q Consensus 154 iv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~ 223 (429)
++++|++++.+ ++.+|.+|+||||+|+..|+.+++++|++.++ + .|+||||+|+..|+.
T Consensus 241 ~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga----~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 241 CLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQA----G------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH----H------TTSSCCC--------
T ss_pred HHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC----C------CCCChhHHHHhcCCc
Confidence 99999998766 57889999999999999999999999998876 2 589999999999874
No 103
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.55 E-value=1.1e-14 Score=120.06 Aligned_cols=75 Identities=23% Similarity=0.170 Sum_probs=67.0
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSAL 214 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpL 214 (429)
.|..|+||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+..|+.+++++|++.|+ ++|.+|.+|.||=
T Consensus 38 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga----~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 38 RSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGA----DVNARSWGSSHHH 112 (115)
T ss_dssp CCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSS----SHHHHSCCCC---
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHHcCC----CCCcCCccccccc
Confidence 456899999999999999999999988766 57789999999999999999999999999998 9999999999983
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.55 E-value=3.3e-15 Score=137.65 Aligned_cols=91 Identities=24% Similarity=0.263 Sum_probs=82.5
Q ss_pred ccCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcC-CCccccccccccCCCC
Q 042589 133 ARRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSR-EELGETIFWQVDNLGN 211 (429)
Q Consensus 133 ~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~-~~~~~~~in~~D~~G~ 211 (429)
+..+.+|.||||+||..|+.++++.|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++. ++ ++|.+|.+|+
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~----~~~~~d~~g~ 141 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNI----ELNQQNKLGD 141 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTC----CCCCCCTTSC
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCC----CccccCCCCC
Confidence 34566789999999999999999999998765 577899999999999999999999999998 76 8999999999
Q ss_pred cHHHHHHHcCCCccccc
Q 042589 212 SALHLAATYGDHRPWHT 228 (429)
Q Consensus 212 TpLHlAa~~g~~~~~~~ 228 (429)
||||+|+..|+.+++++
T Consensus 142 tpL~~A~~~~~~~~v~~ 158 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQL 158 (222)
T ss_dssp CHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHH
Confidence 99999999999887763
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.53 E-value=3.9e-14 Score=112.39 Aligned_cols=78 Identities=24% Similarity=0.288 Sum_probs=70.0
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q 042589 80 IQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll 159 (429)
.+++++|+++|+++| .+|..|+||||+|+..|+.+++++|+
T Consensus 15 ~~~v~~Ll~~g~~~n---------------------------------------~~d~~g~t~L~~A~~~~~~~~v~~Ll 55 (93)
T 1n0q_A 15 LEVVKLLLEAGADVN---------------------------------------AKDKNGRTPLHLAARNGHLEVVKLLL 55 (93)
T ss_dssp HHHHHHHHHTTCCTT---------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCc---------------------------------------ccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 467789999999887 24568999999999999999999999
Q ss_pred HhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCC
Q 042589 160 DTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREE 197 (429)
Q Consensus 160 ~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~ 197 (429)
+++.+ ++.+|.+|+||||+|+..|+.+++++|++.|+
T Consensus 56 ~~ga~-~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 56 EAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 98766 47789999999999999999999999999886
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.53 E-value=3.9e-15 Score=133.42 Aligned_cols=86 Identities=22% Similarity=0.210 Sum_probs=78.9
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCcccccccccc-CCCCcHH
Q 042589 136 SRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVD-NLGNSAL 214 (429)
Q Consensus 136 d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D-~~G~TpL 214 (429)
+.+|.||||+|++.|+.++++.|++ +. .++.+|..|+||||+|+..|+.+++++|++.++ ++|.+| .+|+|||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~~g~tpL 114 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGA----DLDHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TS-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCSSSSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCcCCCCCCCCHH
Confidence 4579999999999999999999998 44 467889999999999999999999999999998 899998 9999999
Q ss_pred HHHHHcCCCcccc
Q 042589 215 HLAATYGDHRPWH 227 (429)
Q Consensus 215 HlAa~~g~~~~~~ 227 (429)
|+|+..|+.++++
T Consensus 115 ~~A~~~~~~~~v~ 127 (183)
T 3deo_A 115 HMAAGYVRPEVVE 127 (183)
T ss_dssp HHHHHTTCHHHHH
T ss_pred HHHHhcCcHHHHH
Confidence 9999999987765
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.48 E-value=1.1e-14 Score=137.04 Aligned_cols=87 Identities=22% Similarity=0.210 Sum_probs=79.3
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCcccccccccc-CCCCcHH
Q 042589 136 SRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVD-NLGNSAL 214 (429)
Q Consensus 136 d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D-~~G~TpL 214 (429)
+.+|.||||+||+.|+.++++.|++ +. .++.+|..|+||||+|+.+|+.+++++|++.++ ++|.+| .+|+|||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga----~~~~~~~~~g~t~L 115 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGA----DLDHRDMRGGLTAL 115 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC----CTTCCCSSSCCCHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CC-CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC----CCCcCCCCCCCCHH
Confidence 3479999999999999999999998 44 457889999999999999999999999999998 899998 8899999
Q ss_pred HHHHHcCCCccccc
Q 042589 215 HLAATYGDHRPWHT 228 (429)
Q Consensus 215 HlAa~~g~~~~~~~ 228 (429)
|+|+..|+.+++++
T Consensus 116 ~~A~~~g~~~~v~~ 129 (244)
T 3ui2_A 116 HMAAGYVRPEVVEA 129 (244)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHH
Confidence 99999999887763
No 108
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.48 E-value=1.4e-14 Score=131.07 Aligned_cols=82 Identities=5% Similarity=-0.050 Sum_probs=73.6
Q ss_pred CCCCcHHHHHHHcCcH----HHHHHHHHhCCCccccCCCCCCcHHHHHHHcCC------HHHHHHHHcCCCccccccccc
Q 042589 137 RRKETPILVAAKMGVT----EMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQ------THVYNLLRSREELGETIFWQV 206 (429)
Q Consensus 137 ~~G~TpLh~Aa~~G~~----eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~------~~iv~~Ll~~~~~~~~~in~~ 206 (429)
..|+||||+|+..|+. +++++|++++.+ ++.+|..|+||||+|+..++ .+++++|++.|+ ++|.+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Ga----din~~ 110 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGA----DITAL 110 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTC----CSSSC
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCC----CCCcc
Confidence 4699999999999975 599999998766 58889999999999999987 588999999998 99999
Q ss_pred cCCCC-cHHHHHHHcCCC
Q 042589 207 DNLGN-SALHLAATYGDH 223 (429)
Q Consensus 207 D~~G~-TpLHlAa~~g~~ 223 (429)
|.+|+ ||||+|+..+..
T Consensus 111 d~~g~ttpLh~A~~~~~~ 128 (186)
T 3t8k_A 111 YKPYKIVVFKNIFNYFVD 128 (186)
T ss_dssp BGGGTBCTTGGGGGCCSC
T ss_pred CCCcCchHHHHHHHcCCC
Confidence 99999 999999996653
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.47 E-value=8.5e-16 Score=154.26 Aligned_cols=133 Identities=16% Similarity=0.047 Sum_probs=91.9
Q ss_pred HHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 042589 81 QVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKILD 160 (429)
Q Consensus 81 ~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~Ll~ 160 (429)
+++++|+++|.+. +||+|.+...+..+ .++.+.+........+..+..|.||||+||+.|+.++|++|++
T Consensus 80 ~~~~~l~~~g~~~--------~T~Lh~Aa~~G~~e--~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~ 149 (376)
T 2aja_A 80 QLWSDAHKKGIKS--------EVICFVAAITGCSS--ALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 149 (376)
T ss_dssp THHHHHHHHTCCH--------HHHHHHHHHHCCHH--HHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCc--------CCHHHHHHHcCCHH--HHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 4556666655443 37777765533322 2333322221111112234467899999999999999999999
Q ss_pred hCCCc--cccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCcccccccc--ccCCCCcHHHHHH-HcCCCccccc
Q 042589 161 TFPVA--IWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQ--VDNLGNSALHLAA-TYGDHRPWHT 228 (429)
Q Consensus 161 ~~~~~--~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~--~D~~G~TpLHlAa-~~g~~~~~~~ 228 (429)
++++. .+..+.+ +||||+|+.+|+.+++++|++.|+ +++. +|.+|.||||+|+ ..|+.++++.
T Consensus 150 ~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga----~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 150 LAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAP----TEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp SCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCG----GGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred CCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCC----ccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 88641 1122223 999999999999999999999988 7776 8899999999999 9999888764
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.42 E-value=2.3e-13 Score=141.30 Aligned_cols=91 Identities=13% Similarity=0.181 Sum_probs=71.5
Q ss_pred HHHHHHHHHhCCCCCCcccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHHH
Q 042589 79 AIQVFDELVDDRNPHVYKYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 158 (429)
Q Consensus 79 a~~iv~~Ll~~~a~~~~~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~L 158 (429)
..+++++|+++|+++| .+|.+|+||||+||..|+.++|++|
T Consensus 186 ~~~~v~~Ll~~ga~vn---------------------------------------~~d~~g~TpLh~A~~~g~~~~v~~L 226 (497)
T 3lvq_E 186 SLPLVDFIIQNGGHLD---------------------------------------AKAADGNTALHYAALYNQPDCLKLL 226 (497)
T ss_dssp THHHHHHHHHHSCCTT---------------------------------------CCCSSSCCHHHHHTTTTCHHHHHHH
T ss_pred cHHHHHHHHHcCCCCC---------------------------------------ccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 4678888888888887 2566899999999999999999999
Q ss_pred HHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHH
Q 042589 159 LDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAAT 219 (429)
Q Consensus 159 l~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~ 219 (429)
++++.+ ++.+|.+|+||||+|+..|+.+++++|++.|+ +++. ||+|.+..
T Consensus 227 l~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga----~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 227 LKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQA----GTFA------FPLHVDYS 276 (497)
T ss_dssp HHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----------------------
T ss_pred HHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC----CCCC------Ccceeecc
Confidence 998766 57889999999999999999999999999998 5555 67777654
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.37 E-value=2.4e-15 Score=151.05 Aligned_cols=133 Identities=10% Similarity=-0.021 Sum_probs=95.5
Q ss_pred HHHHHHHHhCCCCCCc--ccccCCCCcccccccCCccccccccCCCCCCCcccccccCCCCCCcHHHHHHHcCcHHHHHH
Q 042589 80 IQVFDELVDDRNPHVY--KYVYNGREPRISTFGQDVNAFTARETPPDPNTYKKKNARRSRRKETPILVAAKMGVTEMVKK 157 (429)
Q Consensus 80 ~~iv~~Ll~~~a~~~~--~~d~~G~~P~~~~~~~~~~~~~~i~ll~~~~~~~~~~~~~d~~G~TpLh~Aa~~G~~eiv~~ 157 (429)
++++++|+++|+.... ..+..|.||+|.+...++.++ ++.|.+........+..+.+ .||||+||+.|+.++|++
T Consensus 105 ~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~ei--v~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~ 181 (376)
T 2aja_A 105 SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHV--LNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNR 181 (376)
T ss_dssp HHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHH--HHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHH--HHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHH
Confidence 6899999999983310 133458899998876554433 33343322110000111222 999999999999999999
Q ss_pred HHHhCCCcccc--CCCCCCcHHHHHH-HcCCHHHHHHHHcCCCccccccccccCCCCcHHHHHHHcCCCcccc
Q 042589 158 ILDTFPVAIWD--LDPGEKNVLLLAI-ENRQTHVYNLLRSREELGETIFWQVDNLGNSALHLAATYGDHRPWH 227 (429)
Q Consensus 158 Ll~~~~~~~~~--~d~~G~t~LH~A~-~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~~~ 227 (429)
|++++++. .. .|..|+||||+|+ .+|+.+++++|++.++ .|+||||+|+..|+.++++
T Consensus 182 Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-----------~~~taL~~Aa~~g~~evv~ 242 (376)
T 2aja_A 182 LCELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-----------MLAYAEIHEFEYGEKYVNP 242 (376)
T ss_dssp HHHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-----------HHHHHHHCTTTTTTTTHHH
T ss_pred HHHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-----------ccchHHHHHHHCCCHHHHH
Confidence 99997764 33 6788999999999 9999999999998664 2899999999999988765
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.37 E-value=2.5e-12 Score=105.42 Aligned_cols=57 Identities=25% Similarity=0.348 Sum_probs=52.1
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHH
Q 042589 135 RSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLL 192 (429)
Q Consensus 135 ~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~L 192 (429)
+|..|+||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+..|+.+++++|
T Consensus 53 ~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 53 KDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 456899999999999999999999998665 577899999999999999999999987
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.36 E-value=4.4e-13 Score=128.78 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=57.9
Q ss_pred cCCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHcCCC
Q 042589 134 RRSRRKETPILVAAKMGVTEMVKKILDTFPVAIWDLDPGEKNVLLLAIENRQTHVYNLLRSREE 197 (429)
Q Consensus 134 ~~d~~G~TpLh~Aa~~G~~eiv~~Ll~~~~~~~~~~d~~G~t~LH~A~~~g~~~iv~~Ll~~~~ 197 (429)
.+|.+|+||||+|+..|+.++|+.|++++.+ ++.+|.+|+||||+|+..|+.+++++|++.++
T Consensus 200 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 200 KQTGKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3567899999999999999999999998766 57889999999999999999999999999876
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.23 E-value=7.3e-12 Score=125.21 Aligned_cols=87 Identities=14% Similarity=0.038 Sum_probs=79.0
Q ss_pred CCCCcHHHHHHHc-CcHHHHHHHHHhCCCccccCC--CCCCcHHHHHHHcCCHHHHHHHHcCCCccccccccccCCCCcH
Q 042589 137 RRKETPILVAAKM-GVTEMVKKILDTFPVAIWDLD--PGEKNVLLLAIENRQTHVYNLLRSREELGETIFWQVDNLGNSA 213 (429)
Q Consensus 137 ~~G~TpLh~Aa~~-G~~eiv~~Ll~~~~~~~~~~d--~~G~t~LH~A~~~g~~~iv~~Ll~~~~~~~~~in~~D~~G~Tp 213 (429)
..+.||||.|+.. |+.++++.|++++.+. +..| ..|+||||+|+..|+.+++++|++.++ ++|.+|.+|+||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Ga----dvn~~d~~G~Tp 271 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGA----NVNQADSAGRGP 271 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCC----CCCCCCCCCCCH
Confidence 3567899999999 9999999999987664 5666 899999999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCccccc
Q 042589 214 LHLAATYGDHRPWHT 228 (429)
Q Consensus 214 LHlAa~~g~~~~~~~ 228 (429)
||+|+..|+.+++++
T Consensus 272 Lh~A~~~g~~~~v~~ 286 (368)
T 3jue_A 272 LHHATILGHTGLACL 286 (368)
T ss_dssp HHHHHHHTCHHHHHH
T ss_pred HHHHHHcCcHHHHHH
Confidence 999999999887763
No 115
>1oed_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 1dxz_A 3mra_A 2k59_B
Probab=22.34 E-value=4.1e+02 Score=23.57 Aligned_cols=8 Identities=13% Similarity=0.451 Sum_probs=3.7
Q ss_pred HHHHHHHH
Q 042589 311 FAISSLIA 318 (429)
Q Consensus 311 F~~~nt~a 318 (429)
|.+.|.+.
T Consensus 3 ~Y~~nlii 10 (227)
T 1oed_A 3 YFVVNVII 10 (227)
T ss_dssp HHHHHHHH
T ss_pred EEEehHHH
Confidence 44445543
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=21.62 E-value=57 Score=20.74 Aligned_cols=19 Identities=26% Similarity=0.251 Sum_probs=15.6
Q ss_pred cHHHHHHHcCcHHHHHHHH
Q 042589 141 TPILVAAKMGVTEMVKKIL 159 (429)
Q Consensus 141 TpLh~Aa~~G~~eiv~~Ll 159 (429)
.-+..||+.|+.+.++.|=
T Consensus 15 QqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHH
Confidence 3478899999999998774
No 117
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=20.31 E-value=1.1e+02 Score=28.91 Aligned_cols=21 Identities=5% Similarity=0.113 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 042589 355 TMLITSIVAILVSFCSGHSFL 375 (429)
Q Consensus 355 ~~l~~s~~~m~~af~~~~~~v 375 (429)
.+..+|++++..+|++|+|=+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 356778888999999999843
Done!