BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042598
(503 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224069226|ref|XP_002302931.1| predicted protein [Populus trichocarpa]
gi|222844657|gb|EEE82204.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/517 (68%), Positives = 403/517 (77%), Gaps = 17/517 (3%)
Query: 1 MPPSTSLLLGRLLLQQPPHRFISPQSTYFSRFS-PTHY-------LNFLSKPFSSKPTSN 52
MPP TS L LL + SP FS S PTH +PFSS T N
Sbjct: 1 MPPLTSFHLRHLLRH---YHLSSPPPITFSLHSTPTHLPKTPAFPFCLSQRPFSSSQTLN 57
Query: 53 PKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTP----TPSLVQSTLNFSP 108
P I+ PD I +SLS E+ + DPL IS+RLHL FSH+T TPSLV TL SP
Sbjct: 58 PNAIESPDPAIVQSLSTEISRDPNTDPLSISERLHLSFSHLTKNNALTPSLVLQTLKLSP 117
Query: 109 EAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLAS 168
+AGR ++GF++WL ++ANF DE+L+ F DYFGRRKDFKA HD LV+ K V G K S
Sbjct: 118 DAGRTVIGFHNWLIKDANFEQNDESLALFVDYFGRRKDFKAAHDLLVEGKSVAGVKCFES 177
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
IDRLVRAGR TQV+GFFERMERDYGFKRDK+SL VV+KLCENGYASYAEK+VK+ ANE
Sbjct: 178 MIDRLVRAGRTTQVIGFFERMERDYGFKRDKESLTFVVQKLCENGYASYAEKMVKNLANE 237
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
IFPDD ICDLLIKGWCVDGKL+EAKRLA EMYRGGFE+GT+A+N +LDCV KLCR+KDPF
Sbjct: 238 IFPDDGICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEIGTMAFNAMLDCVCKLCREKDPF 297
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL+SE EKVL++M+ GVPRNVETFNVLISNLCK+RR+EDA+KLF R+GEWGC P+ETTF
Sbjct: 298 RLESEVEKVLMEMDIRGVPRNVETFNVLISNLCKVRRTEDAMKLFSRIGEWGCCPDETTF 357
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
LVLI+SLYQAARVGEGDEMIDRMKSAGY + KK YY FL LCGIER+E AMSVFE M
Sbjct: 358 LVLIRSLYQAARVGEGDEMIDRMKSAGYGDKLDKKAYYGFLKILCGIERLEHAMSVFEMM 417
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
K DG P +TYDLLM KWC HNR+DKAN L++EA+ NGV V PKEYRVDP+++KKP AV
Sbjct: 418 KADGCKPGIKTYDLLMGKWCTHNRLDKANVLYNEALSNGVTVTPKEYRVDPKFMKKPKAV 477
Query: 467 KKGKKRETLPEKMARKRRRLKQIRLSFVKKPKRMMMR 503
KK KKRETLPEKMARKRRRLKQIRLSFVKKPK+ M R
Sbjct: 478 KKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRR 514
>gi|255547147|ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546235|gb|EEF47737.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/502 (66%), Positives = 408/502 (81%), Gaps = 14/502 (2%)
Query: 14 LQQPPHRFISPQSTYFSRFSPTHYLNF------LSKPFSSKPTSNPK--TIDDPDQVIAR 65
L PP + + + S +PTH+ F LSKPFS++ T NP ++DP+ IA+
Sbjct: 68 LPSPPAPPLITKLAFSSYSAPTHFPKFAFLPLSLSKPFSTQ-TLNPNNNVLEDPNP-IAQ 125
Query: 66 SLSGELLENLEADPLPISQRLHLIFSHV--TPTPSLVQSTLNFSPEAGRAILGFNHWLTQ 123
S+S EL++N +D L I QRL+L FSH+ + TPS++ TLN SP+AGR +LGF+ WL +
Sbjct: 126 SISAELIKNPNSDSLSILQRLNLHFSHINNSITPSIILQTLNLSPDAGRTVLGFHQWLVK 185
Query: 124 NANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVL 183
ANF +TDET+SFF DYFGRRKDF++ H+ L D+K+V+G K S ++RLVRAGR T+V+
Sbjct: 186 VANFKNTDETISFFIDYFGRRKDFQSTHELLCDSKDVIGYKCFESMVNRLVRAGRATKVM 245
Query: 184 GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGW 243
GFF+RMERDYGFKRD+++LRLVV+ LC+NGYASYAEK+VK+ ANEIFPD+ ICDLLIKGW
Sbjct: 246 GFFDRMERDYGFKRDRENLRLVVKMLCDNGYASYAEKMVKNLANEIFPDENICDLLIKGW 305
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
CVDGKLDEAKRLA EMYRGGFE+GTVAYN ILDCV KLCR+KDPF+++SE EKVL++M+
Sbjct: 306 CVDGKLDEAKRLAGEMYRGGFEIGTVAYNAILDCVCKLCREKDPFKIESEVEKVLVEMDT 365
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
GVPRNVETFNVLI+NLCK+R+++DA+ LF RM EWGC P++TTFLVLI+SLYQAARVGE
Sbjct: 366 RGVPRNVETFNVLITNLCKMRKTQDALNLFNRMREWGCDPDDTTFLVLIRSLYQAARVGE 425
Query: 364 GDEMIDRMKSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
GDEMIDRMKS+GY + KK YY FL LCGIER+E A+SVFE MK DG P +TYDLL
Sbjct: 426 GDEMIDRMKSSGYGNKLDKKAYYGFLKILCGIERLEHAVSVFEMMKADGCKPGIKTYDLL 485
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
+ KWC NRVDK NALF+EA+RNGV V PKEY+VD +Y+KKP AVKK KKRETLPEKMAR
Sbjct: 486 IGKWCTRNRVDKGNALFNEALRNGVPVAPKEYKVDEKYMKKPKAVKKEKKRETLPEKMAR 545
Query: 482 KRRRLKQIRLSFVKKPKRMMMR 503
KRRRLKQIRLSFVKKPK+MM R
Sbjct: 546 KRRRLKQIRLSFVKKPKKMMRR 567
>gi|359491363|ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Vitis vinifera]
Length = 516
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/489 (67%), Positives = 396/489 (80%), Gaps = 11/489 (2%)
Query: 14 LQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLE 73
L P+ S Q + S P LS+ FSS+P + + DD IA+SLS ELL+
Sbjct: 33 LSLDPYCLCSSQRHFVSPSFP------LSRRFSSQPNN---SADDDHSQIAQSLSSELLK 83
Query: 74 NLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDET 133
+ +++P+PI QRL L FSH+TP+P L+ TLN SP+AGR +LGF WL+ N F H+DET
Sbjct: 84 DPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDET 143
Query: 134 LSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
+SFF DYFGRRKDFKAIH+ L+D + G KTL S IDRLVRAGR TQV+ FF+RME DY
Sbjct: 144 ISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDY 203
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF+RD++SL +VV KLCE+G+AS+AEK+VK+ ANEIFP++ ICDLLIKGWCVDGKLDEA+
Sbjct: 204 GFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEAR 263
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
RLA EM+RGGFE+GT+AYN ILDC+ KLCRKKDPFRL+SEAEK+L+DM+ GVPRNVETF
Sbjct: 264 RLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETF 323
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
NVLI+NLCKIR++EDA+KLFYRMGEWGC+PNETTFLVL +SLYQAARVGEGDEMIDRMKS
Sbjct: 324 NVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKS 383
Query: 374 AGY--AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
AG+ A+ KK YYEF+ LCGIERI+ AMS+F KMK DG P +TYDLLM K CAH R+
Sbjct: 384 AGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRL 443
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRL 491
DKANALF EAV GV V+ K Y++DPR++KKP KK KKRETLPEKMARKRRRL++IRL
Sbjct: 444 DKANALFSEAVNRGVPVESKAYKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRL 503
Query: 492 SFVKKPKRM 500
SFVKKPKRM
Sbjct: 504 SFVKKPKRM 512
>gi|297734081|emb|CBI15328.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/489 (67%), Positives = 396/489 (80%), Gaps = 11/489 (2%)
Query: 14 LQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLE 73
L P+ S Q + S P LS+ FSS+P + + DD IA+SLS ELL+
Sbjct: 49 LSLDPYCLCSSQRHFVSPSFP------LSRRFSSQPNN---SADDDHSQIAQSLSSELLK 99
Query: 74 NLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDET 133
+ +++P+PI QRL L FSH+TP+P L+ TLN SP+AGR +LGF WL+ N F H+DET
Sbjct: 100 DPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDET 159
Query: 134 LSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
+SFF DYFGRRKDFKAIH+ L+D + G KTL S IDRLVRAGR TQV+ FF+RME DY
Sbjct: 160 ISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDY 219
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF+RD++SL +VV KLCE+G+AS+AEK+VK+ ANEIFP++ ICDLLIKGWCVDGKLDEA+
Sbjct: 220 GFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEAR 279
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
RLA EM+RGGFE+GT+AYN ILDC+ KLCRKKDPFRL+SEAEK+L+DM+ GVPRNVETF
Sbjct: 280 RLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETF 339
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
NVLI+NLCKIR++EDA+KLFYRMGEWGC+PNETTFLVL +SLYQAARVGEGDEMIDRMKS
Sbjct: 340 NVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKS 399
Query: 374 AGY--AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
AG+ A+ KK YYEF+ LCGIERI+ AMS+F KMK DG P +TYDLLM K CAH R+
Sbjct: 400 AGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRL 459
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRL 491
DKANALF EAV GV V+ K Y++DPR++KKP KK KKRETLPEKMARKRRRL++IRL
Sbjct: 460 DKANALFSEAVNRGVPVESKAYKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRL 519
Query: 492 SFVKKPKRM 500
SFVKKPKRM
Sbjct: 520 SFVKKPKRM 528
>gi|356576704|ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like isoform 1 [Glycine max]
gi|356576706|ref|XP_003556471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like isoform 2 [Glycine max]
Length = 509
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 332/518 (64%), Positives = 387/518 (74%), Gaps = 24/518 (4%)
Query: 1 MPPSTSLLLGRLLLQ------------QPPHRF-ISPQSTYFSRFSPTHYLNFLSKPFSS 47
MPP L L +LLL+ PP F P S + SR T F+ + FSS
Sbjct: 1 MPPLAPLHLRKLLLRSRSLSFTSPTPIHPPPLFPQQPSSHFHSRTLLTPSSLFIIRHFSS 60
Query: 48 KPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFS 107
+ + DQ IA SLS ELL+ ++D L +SQRLHL FSH+TPTP+L+ TLN S
Sbjct: 61 ETQT--------DQ-IAHSLSSELLKEPDSDALSVSQRLHLSFSHITPTPNLILQTLNLS 111
Query: 108 PEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLA 167
E+GR +LGF+ WL+ N FSHTD+TLS+F DYFGRRKDFKA HD L GPKTLA
Sbjct: 112 HESGRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFKATHDVLSAASPAAGPKTLA 171
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S IDRLVRAGRP+Q + FFERMERDYG KRD+ SL++VVEKLC G+ASYAEK+VKD A
Sbjct: 172 SAIDRLVRAGRPSQAVQFFERMERDYGLKRDRASLKVVVEKLCSKGFASYAEKMVKDLAK 231
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
FPD+ CD+LIKGWCVDGKLDEA+RLA EMYRGGFELG +YN +LDCV KLCR+KDP
Sbjct: 232 VFFPDEATCDMLIKGWCVDGKLDEAQRLAGEMYRGGFELGVGSYNAMLDCVCKLCRQKDP 291
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
F+L SEAEKVL++ME+ GVPRNVETFNVLI+NLCKIR++EDA+ LF MGEWGC+PNETT
Sbjct: 292 FQLHSEAEKVLVEMEHRGVPRNVETFNVLITNLCKIRKTEDALGLFRSMGEWGCYPNETT 351
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEK 405
FLVLI+SLYQAAR+ EGDEMIDRM+SAG+ + KK YY+ L LCGIER++ A+SVF
Sbjct: 352 FLVLIRSLYQAARLEEGDEMIDRMRSAGFGEFLDKKAYYQLLKILCGIERVDHALSVFAM 411
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIA 465
MK G P TYDLLM K AHNR+DKANALF+EA G+ V KEY VDPRYLKK
Sbjct: 412 MKDGGCEPGLITYDLLMGKLGAHNRIDKANALFNEAKSRGLPVMLKEYAVDPRYLKKKKV 471
Query: 466 VKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKRMMMR 503
VK KKRETLPEKMARKR RLKQIRLSFVKKPKR+M R
Sbjct: 472 VKGVKKRETLPEKMARKRSRLKQIRLSFVKKPKRVMGR 509
>gi|356535173|ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Glycine max]
Length = 509
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 330/518 (63%), Positives = 392/518 (75%), Gaps = 24/518 (4%)
Query: 1 MPPSTSLLLGRLLLQQPPHRFISP----QSTYFSRFSPTHYLN--------FLSKPFSSK 48
MPP SL L RLLL+ F SP S F R S +H+ + F+++ FSS+
Sbjct: 1 MPPLASLQLRRLLLRSRSLPFTSPSPIHHSPLFPRHSSSHFYSRTLFTPSFFITRHFSSE 60
Query: 49 PTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSP 108
++ IA SLS ELL+ ++D L +SQRL+L FSH+TPTP+L+ TLN SP
Sbjct: 61 TQTDE---------IASSLSSELLKEPDSDALSVSQRLNLSFSHITPTPNLILQTLNLSP 111
Query: 109 EAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLAS 168
+AGR +LGF+ WL+ N FSHTD+TLS+F DYFGRRKDFKA HD L GPKTLAS
Sbjct: 112 QAGRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFKATHDVLAAASPAAGPKTLAS 171
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
IDRLVRAGR +Q + FFERMERDYG KRD+DSL++VVEKLC G+ASYAEK+VKD A E
Sbjct: 172 AIDRLVRAGRSSQAVQFFERMERDYGLKRDRDSLKVVVEKLCSEGFASYAEKMVKDLARE 231
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
FPD+ CD+LI+GWC+DGKLDEA+RLA EMYRGGF+LG AYN +LDCV KLCR+KDPF
Sbjct: 232 FFPDEATCDMLIRGWCIDGKLDEAQRLAGEMYRGGFDLGVGAYNAMLDCVCKLCREKDPF 291
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L SEAEKVL++MEY GVPRN ETFNVLI+NLCKIR++EDA+ L + MGEWGC+PNETTF
Sbjct: 292 QLHSEAEKVLVEMEYRGVPRNTETFNVLITNLCKIRKTEDALGLLHSMGEWGCYPNETTF 351
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
LVLI+SLYQAAR+ EGDEMIDRM+SAG+ + KK YY+FL LCGIER++ A+SVF M
Sbjct: 352 LVLIRSLYQAARLEEGDEMIDRMRSAGFGEFLDKKAYYQFLKILCGIERVDHALSVFAMM 411
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL-KKPIA 465
K DG P TYDLLM K AHNR+DK NALF+EA G+ V KEY VDPRYL KK
Sbjct: 412 KDDGCEPGVITYDLLMGKLGAHNRIDKVNALFNEAKSRGLPVILKEYAVDPRYLKKKKKV 471
Query: 466 VKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKRMMMR 503
VK KKRETLPEKMARKR RLKQIRLS+VKKPKR+M R
Sbjct: 472 VKGVKKRETLPEKMARKRSRLKQIRLSYVKKPKRVMGR 509
>gi|449440893|ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
gi|449477122|ref|XP_004154936.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
Length = 522
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 308/442 (69%), Positives = 362/442 (81%), Gaps = 2/442 (0%)
Query: 64 ARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQ 123
++SL+ ELL++ ++DPLPI+QRL L FSHV P P LV++TLN S EAGR +LGFN WL
Sbjct: 79 SQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLNLSSEAGRTVLGFNEWLVS 138
Query: 124 NANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVL 183
N +F HTDET+S+F D+FGRRKDF A+ + L + GPKTL S I R RAGRPT+++
Sbjct: 139 NPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKTLKSSIHRFARAGRPTKLI 198
Query: 184 GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGW 243
FFE ME +YG KRDK+SLR+VVEKLCENG+ S+AEK+VKD ANE FPD+ ICD LIKGW
Sbjct: 199 SFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLIKGW 258
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
CV+ KLDEAKRLA EMYRGGFELGT AYN +LDCV KLCRKKDPFRLDSEAE++L++M+
Sbjct: 259 CVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLDSEAEEILVEMDC 318
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
GVPRNVETFNVLI+NLCKIRR+ DA+ LF+RMGEWGCHPN TFL+LI+SLYQAAR GE
Sbjct: 319 RGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGE 378
Query: 364 GDEMIDRMKSAGY--AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
GDEMIDRMKS GY A+ KK YYEF+ LCGIERI+ A+ VF KMK DG P +TYDLL
Sbjct: 379 GDEMIDRMKSVGYGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDGCEPGIKTYDLL 438
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
M K CAHNR+DKAN+LF+EA + GV V PK Y+VDP+Y+KKP K KKRETLPEKMAR
Sbjct: 439 MGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYVKKPKDKKVAKKRETLPEKMAR 498
Query: 482 KRRRLKQIRLSFVKKPKRMMMR 503
KRRRLKQIRLSFVKKP+R M R
Sbjct: 499 KRRRLKQIRLSFVKKPRRGMRR 520
>gi|15239488|ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g60960, mitochondrial; Flags: Precursor
gi|10177319|dbj|BAB10645.1| unnamed protein product [Arabidopsis thaliana]
gi|332010020|gb|AED97403.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 311/497 (62%), Positives = 372/497 (74%), Gaps = 11/497 (2%)
Query: 14 LQQPPHRFISPQSTYFSRFSPTH---YLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGE 70
LQ P R IS + FS P+ + F S+ FSS+ + +++D + IA S S E
Sbjct: 27 LQSQP-RIISSKP-LFSPLPPSRSSIFSTFPSRFFSSETNAESESLDSNE--IALSFSKE 82
Query: 71 LLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHT 130
L N +A+ ISQR +L FSH+TP P L+ TLN SPEAGRA LGFN WL N+NFSHT
Sbjct: 83 LTGNPDAESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHT 142
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
DET+SFF DYFGRRKDFK + + + K + G KTL S IDRLVRAGRP QV FFE+ME
Sbjct: 143 DETVSFFVDYFGRRKDFKGMLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKME 202
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLD 250
DYG KRDK+SL LVV+KLCE G+AS AEK+VK+TANEIFPD+ ICDLLI GWC+ KLD
Sbjct: 203 NDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLD 262
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA RLA EM RGGFE+GT AYN +LDCV KLCRKKDPF+L E EKVLL+ME+ GVPRN
Sbjct: 263 EATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNT 322
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
ETFNVLI+NLCKIRR+E+A+ LF RMGEWGC P+ T+LVLI+SLYQAAR+GEGDEMID+
Sbjct: 323 ETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDK 382
Query: 371 MKSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
MKSAGY + KK+YY FL LCGIER+E AMSVF+ MK +G P +TYDLLM K CA+
Sbjct: 383 MKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCAN 442
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI--AVKKGKKRETLPEKMARKRRRL 486
N++ +AN L+ EA + G+ V PKEYRVDPR++KK KKRETLPEK ARK++RL
Sbjct: 443 NQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVDSNVKKRETLPEKTARKKKRL 502
Query: 487 KQIRLSFVKKPKRMMMR 503
KQI +SFVKKP M R
Sbjct: 503 KQINMSFVKKPHNKMRR 519
>gi|21554346|gb|AAM63453.1| unknown [Arabidopsis thaliana]
Length = 521
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 311/497 (62%), Positives = 371/497 (74%), Gaps = 11/497 (2%)
Query: 14 LQQPPHRFISPQSTYFSRFSPTH---YLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGE 70
LQ P R IS + FS P+ + F S+ FSS+ + +++D + IA S S E
Sbjct: 27 LQSQP-RIISSKP-LFSPLPPSRSSIFSTFPSRFFSSETNAESESLDSNE--IALSFSKE 82
Query: 71 LLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHT 130
L N +A+ ISQR +L FSH+TP P L+ TLN SPEAGRA LGFN WL N+NFSHT
Sbjct: 83 LTGNPDAESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHT 142
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
DET+SFF DYFGRRKDFK + + K + G KTL S IDRLVRAGRP QV FFE+ME
Sbjct: 143 DETVSFFVDYFGRRKDFKGMLGIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKME 202
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLD 250
DYG KRDK+SL LVV+KLCE G+AS AEK+VK+TANEIFPD+ ICDLLI GWC+ KLD
Sbjct: 203 NDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLD 262
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA RLA EM RGGFE+GT AYN +LDCV KLCRKKDPF+L E EKVLL+ME+ GVPRN
Sbjct: 263 EATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNT 322
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
ETFNVLI+NLCKIRR+E+A+ LF RMGEWGC P+ T+LVLI+SLYQAAR+GEGDEMID+
Sbjct: 323 ETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDK 382
Query: 371 MKSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
MKSAGY + KK+YY FL LCGIER+E AMSVF+ MK +G P +TYDLLM K CA+
Sbjct: 383 MKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCAN 442
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI--AVKKGKKRETLPEKMARKRRRL 486
N++ +AN L+ EA + G+ V PKEYRVDPR++KK KKRETLPEK ARK++RL
Sbjct: 443 NQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVDSNVKKRETLPEKTARKKKRL 502
Query: 487 KQIRLSFVKKPKRMMMR 503
KQI +SFVKKP M R
Sbjct: 503 KQINMSFVKKPHNKMRR 519
>gi|297797043|ref|XP_002866406.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312241|gb|EFH42665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 522
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 309/495 (62%), Positives = 368/495 (74%), Gaps = 10/495 (2%)
Query: 16 QPPHRFISPQSTYFSRFSPTH---YLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELL 72
Q R IS + + FS P+ + F S+ FSS+ + +T+D + IA S S EL
Sbjct: 29 QAQSRLISSKPS-FSPLPPSRSSTFSTFPSRLFSSETNAESETLDSNE--IALSFSKELT 85
Query: 73 ENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDE 132
N +A+ ISQR +L FSH+TP P L+ TLN SPEAGRA LGFN WL N+NFSHTDE
Sbjct: 86 GNPDAESHAISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDE 145
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
T+SFF DYFGRRKDFK + + + K + G KTL S IDRLVRA RP QV FFE+ME D
Sbjct: 146 TVSFFVDYFGRRKDFKGMLEIISKYKGIAGAKTLESAIDRLVRADRPKQVAAFFEKMEND 205
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
YG KRD+DSL LVV+KLCE +AS AEK+VK+TAN+IFPD+ ICDLLI GWC KLDEA
Sbjct: 206 YGLKRDRDSLTLVVKKLCEKRHASIAEKMVKNTANDIFPDENICDLLISGWCTAEKLDEA 265
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
RLA EM RGGFE+GT AYN ILDCV KLCRKKDPF+L E EKVLL+ME+ GVPRN ET
Sbjct: 266 TRLAGEMSRGGFEIGTKAYNMILDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTET 325
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FNVLI+NLCKIRR+E+A+ LF RMGEWGC P+ T+LVLI+SLYQAAR+GEGDEMID+MK
Sbjct: 326 FNVLINNLCKIRRTEEAMTLFARMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMK 385
Query: 373 SAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
SAGY + KK+YY FL LCGIER+E AMSVF+ MK +G P +TYDLLM K CA+N+
Sbjct: 386 SAGYGEFLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQ 445
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI--AVKKGKKRETLPEKMARKRRRLKQ 488
+ +AN L+ EA + G+ V PKEYRVDPR+LKK KKRETLPEK ARK++RLKQ
Sbjct: 446 LTRANGLYKEAAKKGIAVSPKEYRVDPRFLKKKTKEVDSNVKKRETLPEKTARKKKRLKQ 505
Query: 489 IRLSFVKKPKRMMMR 503
I +SFVKKP M R
Sbjct: 506 INMSFVKKPHNKMRR 520
>gi|357520129|ref|XP_003630353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524375|gb|AET04829.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/464 (62%), Positives = 358/464 (77%), Gaps = 7/464 (1%)
Query: 40 FLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSL 99
F + FSS+ P + +PD IA ++S ELL+ ++DP ++QRL+L FSH+TPTP+L
Sbjct: 57 FQIEHFSSESKPEPVSTTEPDP-IAIAISSELLKEPDSDPSSVTQRLNLSFSHITPTPNL 115
Query: 100 VQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE 159
+ TLN S EAGR +LGF+ WL N F+HTDETLS+F DYFGRRKDFKA L
Sbjct: 116 ILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDFKATDKILSGGGG 175
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
G KTL S +DRLVRAGR +Q + FFERME+DYG KRD+ S+++VVEKLC GYASYAE
Sbjct: 176 --GQKTLLSAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVEKLCLKGYASYAE 233
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
K+ D A E FPD++ICDLL+ G+C+DGK++EA+RLA EMYRGGFELG AYN +LDCV
Sbjct: 234 KMTTDLAKEFFPDEEICDLLVAGYCIDGKIEEARRLAGEMYRGGFELGVRAYNAMLDCVC 293
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K+CR+KDPF+L SE++KVL++M+ +GVPRN+ETFNVLI+N CKIR++ DA+ LF M +W
Sbjct: 294 KMCREKDPFQLHSESKKVLVEMDSHGVPRNLETFNVLITNFCKIRKTNDALGLFNFMRQW 353
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYYEFLTRLCGIERIE 397
C+PNETTFLVLIKSLYQAAR+ EGD MID MKSAGY + KK Y++FLT LCGIERI
Sbjct: 354 RCNPNETTFLVLIKSLYQAARLEEGDAMIDGMKSAGYGAFLDKKAYFDFLTILCGIERIN 413
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
A+ +F MK DG P +TYDLLM K AH+RVDKANALF+EA G++V KE+ VDP
Sbjct: 414 HALKIFTMMKADGCEPGVKTYDLLMKKLGAHDRVDKANALFNEARSRGLDVTLKEHVVDP 473
Query: 458 RY--LKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKR 499
R+ K+ AVK KKRETLPEKMARKRRRLKQIRLSFVKKPK+
Sbjct: 474 RFSKKKEKKAVKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 517
>gi|388513923|gb|AFK45023.1| unknown [Medicago truncatula]
Length = 521
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/464 (62%), Positives = 358/464 (77%), Gaps = 7/464 (1%)
Query: 40 FLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSL 99
F + FSS+ P + +PD IA ++S ELL+ ++DP ++QRL+L FSH+TPTP+L
Sbjct: 57 FQIEHFSSESKPEPVSTTEPDP-IAIAISSELLKEPDSDPSSVTQRLNLSFSHITPTPNL 115
Query: 100 VQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE 159
+ TLN S EAGR +LGF+ WL N F+HTDETLS+F DYFGRRKDFKA L
Sbjct: 116 ILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDFKATDKILSGGGG 175
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
G KTL S +DRLVRAGR +Q + FFERME+DYG KRD+ S+++VVEKLC GYASYAE
Sbjct: 176 --GQKTLLSAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVEKLCLKGYASYAE 233
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
K+ D A E FPD++ICDLL+ G+C+DGK++EA+RLA EMYRGGFELG AYN +LDCV
Sbjct: 234 KMTTDLAKEFFPDEEICDLLVAGYCIDGKIEEARRLAGEMYRGGFELGVRAYNAMLDCVC 293
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K+CR+KDPF+L SE++KVL++M+ +GVPRN+ETFNVLI+N CKIR++ DA+ LF M +W
Sbjct: 294 KMCREKDPFQLHSESKKVLVEMDSHGVPRNLETFNVLITNFCKIRKTNDALGLFNFMRQW 353
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYYEFLTRLCGIERIE 397
C+PNETTFLVLIKSLYQAAR+ EGD MID MKSAGY + KK Y++FLT LCGIERI
Sbjct: 354 RCNPNETTFLVLIKSLYQAARLEEGDAMIDGMKSAGYGAFLDKKAYFDFLTILCGIERIN 413
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
A+ +F MK DG P +TYDLLM K AH+RVDKANALF+EA G++V KE+ VDP
Sbjct: 414 HALKIFTMMKADGCEPGVKTYDLLMKKLGAHDRVDKANALFNEARSRGLDVTLKEHVVDP 473
Query: 458 RY--LKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKR 499
R+ K+ AVK KKRETLPEKMARKRRRLKQIRLSFVKKPK+
Sbjct: 474 RFSKKKEKKAVKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 517
>gi|242046216|ref|XP_002460979.1| hypothetical protein SORBIDRAFT_02g038690 [Sorghum bicolor]
gi|241924356|gb|EER97500.1| hypothetical protein SORBIDRAFT_02g038690 [Sorghum bicolor]
Length = 484
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/419 (48%), Positives = 269/419 (64%), Gaps = 7/419 (1%)
Query: 88 LIFSHVTPTPSLVQSTLNFSPEA-GRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKD 146
L FS V PT +L+ L SP A RA +L + + +D L+ + RR+D
Sbjct: 69 LHFSDVRPTNALLAEALALSPPATSRAAAELFRFLVRRRSLHPSDGALAPVVRHLARRRD 128
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F A+ + + LGP TL + + +L RAGRPT + F+ + R++++L L+V
Sbjct: 129 FPAVRALIQEFPTALGPATLDAYLQQLARAGRPTDAVKVFDELPEQL---RNREALTLLV 185
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
L G+ S+AE+ K ANEIFPDD IC LL+ G+ GKLD A RL E RGGF+
Sbjct: 186 SALSAEGFPSHAERAAKKVANEIFPDDNICTLLVSGYANAGKLDHALRLIGETRRGGFQP 245
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
G AYN +LDCV +LCRKKDP R+ EAEK L+DME NG+PR+ TF VLI+N CKIR++
Sbjct: 246 GLDAYNAVLDCVCRLCRKKDPLRMPMEAEKFLVDMEANGIPRDAGTFRVLITNFCKIRKT 305
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYY 384
EDA+ LF MGEWGC P+ T+LVLI+SLYQAAR EGDEM+ M+SAG+ + +K YY
Sbjct: 306 EDAMNLFRCMGEWGCSPDADTYLVLIRSLYQAARTSEGDEMMTWMRSAGFGDKLDRKAYY 365
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
F+ LCGI+R+E A+ VF MK GH P ++Y LL+ K HN D+++AL+ EAV
Sbjct: 366 GFIKILCGIDRVEHALKVFRMMKGYGHAPGVKSYSLLIEKLARHNLGDRSSALYREAVAR 425
Query: 445 GVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKRMMMR 503
GV V EY +D RY+K KK KKR TLPEKM K +RL ++R+SFVKKPKR M+R
Sbjct: 426 GVPVAQGEYSIDKRYVKA-KKEKKVKKRLTLPEKMRLKSKRLYKLRMSFVKKPKRRMVR 483
>gi|115473237|ref|NP_001060217.1| Os07g0603900 [Oryza sativa Japonica Group]
gi|34394565|dbj|BAC83868.1| unknown protein [Oryza sativa Japonica Group]
gi|34394935|dbj|BAC84486.1| unknown protein [Oryza sativa Japonica Group]
gi|113611753|dbj|BAF22131.1| Os07g0603900 [Oryza sativa Japonica Group]
gi|125601001|gb|EAZ40577.1| hypothetical protein OsJ_25034 [Oryza sativa Japonica Group]
gi|215686658|dbj|BAG88911.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 486
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/451 (47%), Positives = 277/451 (61%), Gaps = 11/451 (2%)
Query: 59 PDQVIARSLSGELLENLEADPLPISQ---RLHLIFSHVTPT-PSLVQSTLNFSPEAGRAI 114
P +A SL+G L L + P P + L FS V PT L ++ P RA
Sbjct: 40 PPATLASSLAGAL-SALSSTPPPATSPDAYFSLHFSDVRPTNALLAEALALAPPATSRAA 98
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV 174
+L + + +D L+ + RR+DF A+ + + LG TL + + L
Sbjct: 99 AELFRFLVRRRSLHPSDSALAPVVRHLARRRDFPAVRSLVQEFPSALGHDTLDAYLLSLA 158
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDK 234
RAGR T + F+ + R + +L +V L G+ S+AE VK ANEIFPDD
Sbjct: 159 RAGRATDAVKVFDELPPQL---RTRQALTSLVSSLSAEGWPSHAEGAVKKVANEIFPDDN 215
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
IC LL+ G+ GKLD A RL E RGGF+ G AYN +LDC+ +LCRKKDP R+ +EA
Sbjct: 216 ICTLLVSGYANAGKLDHALRLIGETRRGGFQPGLDAYNAVLDCICRLCRKKDPLRMPAEA 275
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
EK L+DME NG+PR+ TF VLI+NLCKIR++EDA+ LF RMGEWGC P+ T+LVLIKS
Sbjct: 276 EKFLVDMEANGIPRDAGTFRVLITNLCKIRKTEDAMNLFRRMGEWGCSPDADTYLVLIKS 335
Query: 355 LYQAARVGEGDEMIDRMKSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
LYQAAR+ EGDEM+ M+SAG+ + +K YY F+ LCGIER+E A+ VF MK GH
Sbjct: 336 LYQAARISEGDEMMTWMRSAGFGAKLDRKAYYGFIKILCGIERVEHAVKVFRMMKGYGHA 395
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKR 472
P +++Y LL+ K HN D+ANALF EAV GV V P Y++D + K KK KKR
Sbjct: 396 PGTKSYSLLIEKLTRHNLGDRANALFREAVARGVTVTPGVYKID-KKYVKAKKEKKVKKR 454
Query: 473 ETLPEKMARKRRRLKQIRLSFVKKPKRMMMR 503
TLPEKM K +RL ++R+SFVKKPKR M+R
Sbjct: 455 LTLPEKMRLKSKRLYKLRMSFVKKPKRRMVR 485
>gi|125559098|gb|EAZ04634.1| hypothetical protein OsI_26782 [Oryza sativa Indica Group]
Length = 483
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/448 (47%), Positives = 276/448 (61%), Gaps = 11/448 (2%)
Query: 62 VIARSLSGELLENLEADPLPISQ---RLHLIFSHVTPT-PSLVQSTLNFSPEAGRAILGF 117
+A SL+G L L + P P + L FS V PT L ++ P RA
Sbjct: 40 TLASSLAGAL-SALSSTPPPATSPDAYFSLHFSDVRPTNALLAEALALAPPATSRAAAEL 98
Query: 118 NHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAG 177
+L + + +D L+ + RR+DF A+ + + LG TL + + L RAG
Sbjct: 99 FRFLVRRRSLHPSDSALAPVVRHLARRRDFPAVRSLVQEFPSALGHDTLDAYLLSLARAG 158
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICD 237
R T + F+ + R + +L +V L G+ S+AE VK ANEIFPDD IC
Sbjct: 159 RATDAVKVFDELPPHL---RTRQALTSLVSSLSAEGWPSHAEGAVKKVANEIFPDDNICT 215
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
LL+ G+ GKLD A RL E RGGF+ G AYN +LDC+ +LCRKKDP R+ +EAEK
Sbjct: 216 LLVSGYANAGKLDHALRLIGETRRGGFQPGLDAYNAVLDCICRLCRKKDPLRMPAEAEKF 275
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L+DME NG+PR+ TF VLI+NLCKIR++EDA+ LF RMGEWGC P+ T+LVLIKSLYQ
Sbjct: 276 LVDMEANGIPRDAGTFRVLITNLCKIRKTEDAMNLFRRMGEWGCSPDADTYLVLIKSLYQ 335
Query: 358 AARVGEGDEMIDRMKSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
AAR+ EGDEM+ M+SAG+ + +K YY F+ LCGIER+E A+ VF MK GH P +
Sbjct: 336 AARISEGDEMMTWMRSAGFGTKLDRKAYYGFIKILCGIERVEHAVKVFRMMKGYGHAPGT 395
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
++Y LL+ K HN D+ANALF EAV GV V P Y++D + K KK KKR TL
Sbjct: 396 KSYSLLIEKLTRHNLGDRANALFREAVARGVTVTPGVYKID-KKYVKAKKEKKVKKRLTL 454
Query: 476 PEKMARKRRRLKQIRLSFVKKPKRMMMR 503
PEKM K +RL ++R+SFVKKPKR M+R
Sbjct: 455 PEKMRLKSKRLYKLRMSFVKKPKRRMVR 482
>gi|326495818|dbj|BAJ90531.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509169|dbj|BAJ86977.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/472 (45%), Positives = 284/472 (60%), Gaps = 13/472 (2%)
Query: 33 SPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSH 92
+P + LS + T++ +I LS L D L FS
Sbjct: 19 TPCPLVRHLSTAPAPSSTTDTTSIASSLAAAVTKLSSTLAPATSPD-----AYFSLHFSD 73
Query: 93 VTPTPSLVQSTLNFSPEA-GRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIH 151
V PT +L+ TL+ SP A RA +L + + +D L+ + RR+DF A+
Sbjct: 74 VRPTNALLAETLSLSPPATSRAAADLFRFLVRR-SLHPSDGALALVVRHLARRRDFPAVR 132
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
L + LGP T+ + + L RAGR T L F+ + + +R +L +V L
Sbjct: 133 TLLQEFPSALGPDTVDAYLFHLARAGRATDALKVFDELPGELHTRR---ALTSLVSSLSS 189
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G+ AE+ VK A+EIFPDD IC LL+ G+ GKLD A RL E GGF+ G AY
Sbjct: 190 EGFPQLAERAVKKIAHEIFPDDNICTLLVSGYADAGKLDHALRLIGETRNGGFQPGLDAY 249
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N +LDCV +LCRKKDP R+ EAEK L+DME NG+PR+V TF VLI NLCKIRR+EDAIK
Sbjct: 250 NAVLDCVCRLCRKKDPLRMPVEAEKFLVDMESNGIPRDVGTFRVLIKNLCKIRRTEDAIK 309
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYYEFLTR 389
LF +MGEWGC P+ T+L+LIKSLYQAAR+ EGDEM+ M+SAG+ + +K YY F+
Sbjct: 310 LFGQMGEWGCSPDADTYLILIKSLYQAARISEGDEMMIWMRSAGFGDKLDRKAYYGFIKV 369
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
LCGIER+E A+ VF MK GH P +++Y LL+ K HN D++NALF EA+ GV V
Sbjct: 370 LCGIERVEHAVKVFRLMKGYGHAPGTKSYSLLIEKLARHNLGDRSNALFREALARGVTVT 429
Query: 450 PKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKRMM 501
P Y++D RY+K+ KK KKR TLPEK K +RL ++++SFVKKPKR M
Sbjct: 430 PGVYKIDKRYVKE-KKEKKVKKRLTLPEKKILKSKRLYKLKMSFVKKPKRQM 480
>gi|223949091|gb|ACN28629.1| unknown [Zea mays]
gi|414590824|tpg|DAA41395.1| TPA: hypothetical protein ZEAMMB73_277016 [Zea mays]
gi|414590825|tpg|DAA41396.1| TPA: hypothetical protein ZEAMMB73_277016 [Zea mays]
gi|414590826|tpg|DAA41397.1| TPA: hypothetical protein ZEAMMB73_277016 [Zea mays]
Length = 484
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/419 (49%), Positives = 267/419 (63%), Gaps = 7/419 (1%)
Query: 88 LIFSHVTPTPSLVQSTLNFSPEA-GRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKD 146
L FS V PT +L+ L SP A RA +L + + +D L+ + RR+D
Sbjct: 69 LHFSDVRPTNALLAEALALSPPATSRAAADLFRFLVRRRSLHPSDGALAPIVRHLARRRD 128
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F A+ + + LGP TL + + +L RAGRPT + F+ + R++++L L+V
Sbjct: 129 FPAVRALIQEFPTALGPTTLDAYLQQLTRAGRPTDAVKVFDELPEQL---RNREALTLLV 185
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
L G+ S+AE+ K A+EIFPDD IC LL+ G+ GKLD A RL E RGGF
Sbjct: 186 SSLSSEGFPSHAERAAKKVASEIFPDDNICTLLVSGYANAGKLDHALRLIGETRRGGFHP 245
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
G AYN +LDCV +LCRKKDP R+ EAEK L+DME NG+PR+ TF VLI+N CKIR++
Sbjct: 246 GLDAYNAVLDCVCRLCRKKDPLRMPIEAEKFLVDMEANGIPRDAGTFRVLITNFCKIRKT 305
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYY 384
DA+ LF RMGEWGC P+ T+LVLI+SLYQAAR EGDEMI M+SAG+ + +K YY
Sbjct: 306 GDAMNLFQRMGEWGCSPDADTYLVLIRSLYQAARTSEGDEMITWMRSAGFGDKLDRKAYY 365
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
F+ LCGIER+E A+ VF MK GH P ++Y LL+ K HN D++NALF EAV
Sbjct: 366 GFIKILCGIERVEHAVKVFRMMKGYGHAPGVKSYTLLIEKLARHNLGDRSNALFREAVAR 425
Query: 445 GVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKRMMMR 503
GV V EY VD RY+K K KKR TLPEKM K +RL ++R+SFVKKPKR M+R
Sbjct: 426 GVPVAQGEYNVDKRYVKT-KKEKTVKKRLTLPEKMRLKSKRLYKLRMSFVKKPKRRMLR 483
>gi|326519158|dbj|BAJ96578.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 214/472 (45%), Positives = 284/472 (60%), Gaps = 13/472 (2%)
Query: 33 SPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSH 92
+P + LS + T++ +I LS L D L FS
Sbjct: 19 TPCPLVRHLSTAPAPSSTTDTTSIASSLAAAVTKLSSTLAPATSPD-----AYFSLHFSD 73
Query: 93 VTPTPSLVQSTLNFSPEA-GRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIH 151
V PT +L+ TL+ SP A RA +L + + +D L+ + RR+DF A+
Sbjct: 74 VRPTNALLAETLSLSPPATSRAAADLFRFLVRR-SLHPSDGALALVVRHLARRRDFPAVR 132
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
L + LGP T+ + + L RAGR T L F+ + + +R +L +V L
Sbjct: 133 TLLQEFPSALGPDTVDAYLFHLARAGRATDALKVFDELPGELHTRR---ALTSLVSSLSS 189
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G+ AE+ VK A+EIFPDD IC LL+ G+ GKLD A RL E GGF+ G AY
Sbjct: 190 EGFPQLAERAVKKIAHEIFPDDNICTLLVSGYADAGKLDHALRLIGETRNGGFQPGLDAY 249
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N +LDCV +LCRKKDP R+ EAEK L+DME NG+PR+V TF VLI NLCKIRR+EDAIK
Sbjct: 250 NAVLDCVCRLCRKKDPLRMPVEAEKFLVDMESNGIPRDVGTFRVLIKNLCKIRRTEDAIK 309
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYYEFLTR 389
LF +MGEWGC P+ T+L+LIKSLYQAAR+ EGDEM+ M+SAG+ + +K YY F+
Sbjct: 310 LFGQMGEWGCSPDADTYLILIKSLYQAARISEGDEMMIWMRSAGFGDKLDRKAYYGFIKV 369
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
LCGIER+E A+ VF MK GH P +++Y LL+ K HN D++NALF EA+ GV V
Sbjct: 370 LCGIERVEHAVKVFRLMKGYGHAPGTKSYSLLIEKLARHNLGDRSNALFREALARGVTVT 429
Query: 450 PKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKRMM 501
P Y++D RY+K+ K+ KKR TLPEK K +RL ++++SFVKKPKR M
Sbjct: 430 PGVYKIDKRYVKE-KKEKRVKKRLTLPEKKILKSKRLYKLKMSFVKKPKRQM 480
>gi|226531920|ref|NP_001142585.1| uncharacterized protein LOC100274849 [Zea mays]
gi|195606910|gb|ACG25285.1| hypothetical protein [Zea mays]
Length = 484
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 206/419 (49%), Positives = 267/419 (63%), Gaps = 7/419 (1%)
Query: 88 LIFSHVTPTPSLVQSTLNFSPEA-GRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKD 146
L FS V PT +L+ L SP A RA +L + + +D L+ + RR+D
Sbjct: 69 LHFSDVRPTNALLAEALALSPPATSRAAADLFRFLVRRRSLHPSDGALAPIVRHLARRRD 128
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F A+ + + LGP TL + + +L RAGRPT + F+ + R++++L L+V
Sbjct: 129 FPAVRALIQEFPTALGPATLDAYLQQLTRAGRPTDAVKVFDELPEQL---RNREALTLLV 185
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
L G+ S+AE+ K A+EIFPDD IC LL+ G+ GKLD A RL E RGGF
Sbjct: 186 SSLSSEGFPSHAERAAKKVASEIFPDDNICTLLVSGYANAGKLDHALRLIGETRRGGFHP 245
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
G AYN +LDCV +LCRKKDP R+ EAEK L+DME NG+PR+ TF VLI+N CKIR++
Sbjct: 246 GLDAYNAVLDCVCRLCRKKDPLRMPIEAEKFLVDMEANGIPRDAGTFRVLITNFCKIRKT 305
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYY 384
DA+ LF RMGEWGC P+ T+LVLI+SLYQAAR EGDEM+ M+SAG+ + +K YY
Sbjct: 306 GDAMNLFQRMGEWGCSPDADTYLVLIRSLYQAARTSEGDEMMTWMRSAGFGDKLDRKAYY 365
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
F+ LCGIER+E A+ VF MK GH P ++Y LL+ K HN D++NALF EAV
Sbjct: 366 GFIKILCGIERVEHAVKVFRMMKGYGHAPGVKSYSLLIEKLARHNLGDRSNALFREAVAR 425
Query: 445 GVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKRMMMR 503
GV V EY VD RY+K K KKR TLPEKM K +RL ++R+SFVKKPKR M+R
Sbjct: 426 GVPVAQGEYNVDKRYVKT-KKEKTVKKRLTLPEKMRLKSKRLYKLRMSFVKKPKRRMLR 483
>gi|357122058|ref|XP_003562733.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Brachypodium distachyon]
Length = 481
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 203/417 (48%), Positives = 263/417 (63%), Gaps = 8/417 (1%)
Query: 88 LIFSHVTPTPSLVQSTLNFSPEA-GRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKD 146
L FS V PT +L+ TL SP A RA +L + + +D L+ + RR+D
Sbjct: 68 LHFSDVRPTNALLAETLALSPPATSRAAADLFRFLVRR-SLHPSDGALALVVRHLARRRD 126
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F A+ L + LGP TL + + L RAGR T L F+ + R++++L +V
Sbjct: 127 FPAVRTLLQEFPSALGPATLHAYLFHLARAGRATDALKLFDDLPEQL---RNREALTSLV 183
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
L G+ AE+ VK A+EIFPDD IC LL+ G+ GKLD A RL E GGF+
Sbjct: 184 SSLSSEGFPQLAERAVKKVAHEIFPDDNICTLLVSGYADAGKLDHALRLISETRNGGFQP 243
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
G AYN +LDCV +LCRKKDP + EAEK L DME NG+PR+ TF VLI NLCKIR +
Sbjct: 244 GLDAYNAVLDCVCRLCRKKDPLLMPVEAEKFLGDMEANGIPRDAGTFRVLIKNLCKIRMT 303
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA--IGKKDYY 384
E A+ LF RMGEWGC P+ T+L+LIKSLYQAAR+ EGDEM+ M+SAG+ + +K YY
Sbjct: 304 ESAMNLFQRMGEWGCSPDADTYLILIKSLYQAARLAEGDEMMTWMRSAGFGDKLDRKAYY 363
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
F+ LCGIER+E AM VF MK GH P +++Y LL+ K HN D++NALF EAV
Sbjct: 364 GFVKVLCGIERVEHAMKVFRMMKGYGHAPGTKSYSLLIEKLARHNLGDRSNALFREAVAR 423
Query: 445 GVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPKRMM 501
GV V P Y++D RY+K+ KK KKR TLPEK K +RL ++++SFVKKP+R M
Sbjct: 424 GVTVTPGVYKIDKRYVKE-KKEKKVKKRLTLPEKKILKSKRLYKLKMSFVKKPRRRM 479
>gi|359473218|ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61370, mitochondrial-like [Vitis vinifera]
Length = 505
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 31/438 (7%)
Query: 65 RSLSGELLENLEADPLPISQRLHLIFSH----------------VTPTPSLVQSTLNFSP 108
R L L + P P+ Q L + S+ + T SL+ L+
Sbjct: 22 RRLPLALFSTMSLGPSPVLQELCNVVSNGVGSLDDLEASLDRLDASFTSSLISQILDTCK 81
Query: 109 EAG--RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLG---- 162
R +L F W ++ N D+ ++ F +KD KAI D LV + G
Sbjct: 82 NEAPTRRLLRFFLWSSKKFNCKLEDDDFNYAIQVFAEKKDLKAI-DILVSDLSNEGREMK 140
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL--VVEKLCENGYASYAEK 220
+T + LV GR LG F+ +++ FK DS+ + +V LC G+A AE
Sbjct: 141 AQTFGIVAETLVSLGREDDALGLFKNLDK---FKCSYDSVTVTAIVNALCSKGHARRAEG 197
Query: 221 LVKDTANEIFPDDK-ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+V+ ++I I L GW + EA+R+ +EM G YN L C+
Sbjct: 198 VVRHHKDKILGVKPCIYRSLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTFLRCLC 257
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+ K +P L EA V+++M N + ++N+L+S L + RR +++ ++ M
Sbjct: 258 ERNLKSNPSGLVPEALNVMMEMRSNRITPTSISYNILLSCLGRTRRVKESCRILDLMKRL 317
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
GC P+ ++ ++ + LY R G+G++++D M G +K YY+ + LCG+ER+ A
Sbjct: 318 GCSPDWVSYYLVARVLYLTGRFGKGNQIVDEMIEEGLVPDRKFYYDLIGVLCGVERVNYA 377
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
+ +FE+MK YD+L+ K C K L+DEA R GV + +DP
Sbjct: 378 LEMFERMKRSSLGGYGPVYDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSSEVLDPSI 437
Query: 460 LK--KPIAVKKGKKRETL 475
K KP + K +E L
Sbjct: 438 TKVFKPARKDEEKGKEKL 455
>gi|449441065|ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
gi|449477571|ref|XP_004155060.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
Length = 487
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 208/455 (45%), Gaps = 29/455 (6%)
Query: 13 LLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELL 72
LL+ FI+ RF H +N + +VI+ ++ G L
Sbjct: 18 LLKLKWDSFIAQSVCTQHRFCSLH-----------STVNNGAAVSKLCEVISCTIGG--L 64
Query: 73 ENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAG--RAILGFNHWLTQNANFSHT 130
+ LE+ L ++ T SLV ++ S R +L F W + N +
Sbjct: 65 DELESS---------LNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLE 115
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEV---LGPKTLASCIDRLVRAGRPTQVLGFFE 187
DE + +F ++KD+ A++ L + K+ + +T + V+ R + LG F+
Sbjct: 116 DEDFNNAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFK 175
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD-DKICDLLIKGWCVD 246
+E+ Y D+ ++ ++ LC G+A AE +V ++I I L+ GW +
Sbjct: 176 NLEK-YKCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIK 234
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
EA+R+ +EM G YN L C+ + +K+P L E+ V+++M +
Sbjct: 235 KNTKEARRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKI 294
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
N ++N+L+S LCK RR +++ K+ M GC P+ ++ ++ + L+ R G+G E
Sbjct: 295 SPNSISYNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGRE 354
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++D M G +K YY+ + LCG+ER A+ +FEKMK YD+L+ K C
Sbjct: 355 IVDEMIEEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLC 414
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ L++EA+ GV + +DP K
Sbjct: 415 RGGEFEMGRQLWEEAMAMGVSLNCSSEILDPSITK 449
>gi|356565115|ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Glycine max]
Length = 451
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 183/369 (49%), Gaps = 9/369 (2%)
Query: 96 TPSLVQSTLNFSPEAG--RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDF 153
T SLV ++ S R +L F W +N + D+ + F +KD+ A+
Sbjct: 36 TSSLVAQAIDSSKHEAQTRRLLRFFLWSCKNLSHRLEDKDYNHALRVFAEKKDYTAMDIL 95
Query: 154 LVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ D K+ + +T + + LV+ G+ + LG F+ +++ Y D+ ++ +V LC
Sbjct: 96 MGDLKKEGRAMDAETFSLVAENLVKLGKEDEALGIFKNLDK-YKCSIDEFTVTAIVNALC 154
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDL--LIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
G+ AE +V N+ K C L+ GW V + EA+R+ +EM G
Sbjct: 155 SKGHGKRAEGVVWH-HNDKITGTKPCIYRSLLYGWSVQRNVKEARRIIKEMKSNGVIPDL 213
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ YN L C+ + + +P L EA V+++M+ + V ++N+L+S L K RR ++
Sbjct: 214 LCYNTFLRCLCERNLRHNPSGLVPEALNVMMEMKSHNVFPTSISYNILLSCLGKTRRVKE 273
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+ ++ M GC P+ ++ ++ K L+ + R G+G EM+D+M G K YY +
Sbjct: 274 SCQILETMKISGCDPDWVSYYLVAKVLFLSGRFGKGKEMVDQMIGKGLVPNHKFYYSLIG 333
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
LCG+ER+ A+ +FEKMK YD+L+ K C +K L+DEA G+ +
Sbjct: 334 ILCGVERVNYALELFEKMKKSSMGGYGPVYDVLIPKLCRGGDFEKGRELWDEASGMGITL 393
Query: 449 KPKEYRVDP 457
+ E +DP
Sbjct: 394 QCSEDVLDP 402
>gi|297739041|emb|CBI28530.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 191/402 (47%), Gaps = 13/402 (3%)
Query: 96 TPSLVQSTLNFSPEAG--RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDF 153
T SL+ L+ R +L F W ++ N D+ ++ F +KD KAI D
Sbjct: 38 TSSLISQILDTCKNEAPTRRLLRFFLWSSKKFNCKLEDDDFNYAIQVFAEKKDLKAI-DI 96
Query: 154 LVDNKEVLG----PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL--VVE 207
LV + G +T + LV GR LG F+ +++ FK DS+ + +V
Sbjct: 97 LVSDLSNEGREMKAQTFGIVAETLVSLGREDDALGLFKNLDK---FKCSYDSVTVTAIVN 153
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDK-ICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC G+A AE +V+ ++I I L GW + EA+R+ +EM G
Sbjct: 154 ALCSKGHARRAEGVVRHHKDKILGVKPCIYRSLFYGWSEQKNVKEARRILKEMKSVGIMP 213
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
YN L C+ + K +P L EA V+++M N + ++N+L+S L + RR
Sbjct: 214 DLFCYNTFLRCLCERNLKSNPSGLVPEALNVMMEMRSNRITPTSISYNILLSCLGRTRRV 273
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+++ ++ M GC P+ ++ ++ + LY R G+G++++D M G +K YY+
Sbjct: 274 KESCRILDLMKRLGCSPDWVSYYLVARVLYLTGRFGKGNQIVDEMIEEGLVPDRKFYYDL 333
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LCG+ER+ A+ +FE+MK YD+L+ K C K L+DEA R GV
Sbjct: 334 IGVLCGVERVNYALEMFERMKRSSLGGYGPVYDVLIPKLCRSGDFGKGRELWDEATRVGV 393
Query: 447 EVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQ 488
+ +DP K +K ++ T+ + ++ + ++
Sbjct: 394 LLHCSSEVLDPSITKVFKPARKDEEVCTMSRTLVQEAKAVRN 435
>gi|357503757|ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497182|gb|AES78385.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 563
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 232/489 (47%), Gaps = 35/489 (7%)
Query: 18 PHRFISPQSTYF---SRF-------SPTHYLNFLSKPFSS--KPTSNPKTIDDPDQVIAR 65
P +SPQ +F S F + TH LS S P S P + D ++
Sbjct: 64 PESLVSPQCMHFLLNSAFKRYWLQNTSTHKFQLLSVSLFSTLHPISTPPLLQDLCDIVTS 123
Query: 66 SLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEA-GRAILGFNHWLTQN 124
++ G L++LE+ +++ F +P + Q + EA R +L F W +N
Sbjct: 124 TVGG--LDDLES---CLNK-----FKGSLTSPLVAQVIDSVKHEAHTRRLLRFFLWSNKN 173
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQ 181
+ D+ ++ F +KD+ A+ L D K+ V+ +T + V+ G+ +
Sbjct: 174 LSNDLEDKDYNYALRVFIEKKDYTAMDILLGDFKKQGRVMEAQTFGVVAETYVKLGKEDE 233
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV---KDTANEIFPDDKICDL 238
LG F+ +++ Y D+ ++ ++ LC G+A AE + KD P +
Sbjct: 234 ALGIFKNLDK-YKCLIDEFTVTAIINALCSKGHAKRAEGVAWHHKDKIKGALP--CVYRS 290
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ GW ++ + E++R+ +EM G V YN L C+ + + +P L EA V+
Sbjct: 291 LLYGWSLERNVKESRRIIQEMKTNGVTPDLVCYNTFLRCLCERNLRNNPSGLVLEALNVM 350
Query: 299 LDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
++M Y P ++ ++N+L+S L K RR +++ ++ M + G P+ ++ ++ + L+
Sbjct: 351 MEMRSYKVFPTSI-SYNILLSCLGKTRRVKESCQILEAMNKSGVAPDWVSYYLVSRVLFL 409
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ R G+G E++D+M G K YY + LCG+ER+ A+ +FEKMK
Sbjct: 410 SGRFGKGKEIVDQMIEKGLVPNHKFYYSLIGILCGVERVNHALDLFEKMKGSSVGGYGPV 469
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPE 477
YD+L+ K C +K L+DE G+ ++ + +DP + I K+ +K +
Sbjct: 470 YDVLIPKLCRGGDFEKGRELWDEGTYMGITLQCSKDVLDPSITEVYIP-KRPEKINVVDS 528
Query: 478 KMARKRRRL 486
A+ +++L
Sbjct: 529 PKAKSQQKL 537
>gi|224121504|ref|XP_002318601.1| predicted protein [Populus trichocarpa]
gi|222859274|gb|EEE96821.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 211/432 (48%), Gaps = 31/432 (7%)
Query: 42 SKP--FSSKPTSN--PKTIDDPDQVIARSLSGELLENLEADPLPISQ-RLHLIFSHVTPT 96
SKP +S+K N P + + +VI+ + G L++LE L ++Q + L + VT
Sbjct: 22 SKPPLYSTKQQHNQLPLELQEACKVISSWIGG--LDDLE---LSLNQFKGQLTYPLVT-- 74
Query: 97 PSLVQSTLNFSPEAGRAILGFNHWLTQ--------NANFSHTDETLSFFTDYFGRRKDFK 148
++ S + +P R IL F W + + +F+H L+ D+ G R
Sbjct: 75 -QIINSCKHEAPS--RRILRFFLWSNKVLDSEKLKDDDFNHVIRVLAEKKDHTGMRI--- 128
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
I D + + V+ P+T A + LV+ GR + LG F+ +E+ + +D ++ ++
Sbjct: 129 LISDLRKEGR-VMDPQTFALVAETLVKLGREDEALGIFKNLEK-FKCPQDGFAVTAIISA 186
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDL---LIKGWCVDGKLDEAKRLAREMYRGGFE 265
LC G+A A+ + N + C + L+ GW V + EA+++ +EM G
Sbjct: 187 LCAKGHAKKAQGVFSHHKNNKISGLEPCVVYRCLLYGWSVQENVKEARKIIQEMKGDGLI 246
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
YN L C+ + K++P L EA V+++M + N ++N L+S+L + RR
Sbjct: 247 PDLFCYNTFLKCLCERNLKRNPSGLVPEALNVMMEMRSYRIEPNSISYNTLLSSLGRARR 306
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+++ ++ M GC P+ ++ ++ K +Y R G+G+E++D M G +K YY
Sbjct: 307 VKESYRMLETMKTTGCAPDWVSYFLVAKVMYLTGRFGKGNEIVDEMIGQGLLPDRKFYYN 366
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LCG+ER+ A+ +FE+MKT YD+L+ K C ++ L++EA G
Sbjct: 367 LIGVLCGVERVSYALELFERMKTSSLGGYGPVYDILIPKLCKGGDFERGRELWEEATAMG 426
Query: 446 VEVKPKEYRVDP 457
V +DP
Sbjct: 427 VSFSCSSDVLDP 438
>gi|259489942|ref|NP_001159257.1| uncharacterized protein LOC100304347 [Zea mays]
gi|223943049|gb|ACN25608.1| unknown [Zea mays]
gi|223944973|gb|ACN26570.1| unknown [Zea mays]
gi|414871380|tpg|DAA49937.1| TPA: hypothetical protein ZEAMMB73_156182 [Zea mays]
gi|414871381|tpg|DAA49938.1| TPA: hypothetical protein ZEAMMB73_156182 [Zea mays]
Length = 499
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 184/386 (47%), Gaps = 22/386 (5%)
Query: 93 VTPTPSLVQSTLNFSPE----AGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFK 148
V +P L+ ++ E +GR +L F W + +E L R D
Sbjct: 66 VAVSPHLIGRVIDSCGETGGGSGRRLLRFLAWCRSKHSGVLGEEALDRAIGVLARAGDLT 125
Query: 149 AIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERD---------YGFK 196
A+ + D ++ + P+T ++ ID LV+AGR + + F +ER G
Sbjct: 126 AMRIAIADAEKDGRRMAPETFSTVIDALVKAGREDEAVRLFRGLERQRLLPECGSRVGGH 185
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL---LIKGWCVDGKLDEAK 253
S +V LC+ G+A A+ +V +E+ + + + L+ GWCV G EA+
Sbjct: 186 GVWSSSLAMVHALCKRGHAREAQGVVWHHKSELSAEPMVSIVERSLLHGWCVHGNAKEAR 245
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
++ EM G LG ++N L CV +P L EA +L +M GVP +F
Sbjct: 246 KVLNEMKSSGVPLGLPSFNEFLHCVCHRNLNFNPSALVPEAMDILTEMRTCGVPPAASSF 305
Query: 314 NVLISNLCKIRRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
N+L+S L + RR ++A ++ Y M G+ GC P+ ++ ++++ LY R+ G ++D M
Sbjct: 306 NILLSCLGRARRVKEAYRILYLMREGKAGCSPDWVSYYLVVRVLYLTRRILRGKRLVDAM 365
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+G K ++ + LCG E ++ A+ +F+ MK D+ YDLL+ K C R
Sbjct: 366 LESGVLPTAKFFHGLIGILCGTEEVDHALDMFKLMKRC-ELVDARIYDLLIEKLCRIGRF 424
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDP 457
+ L+DEA +G+ + + +DP
Sbjct: 425 EIGRELWDEATNSGLVLGCSQDLLDP 450
>gi|255547329|ref|XP_002514722.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546326|gb|EEF47828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 479
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 179/356 (50%), Gaps = 8/356 (2%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLAS 168
R +L F W + +FS DE + +KD A+ + D ++ V+ P+T
Sbjct: 72 RRLLRFFLWSYKRLDFSMKDEDFNHAIRVLAEKKDHTAMQILISDLRKEGRVMEPQTFGL 131
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV---KDT 225
+ LV+ GR + LG F+ +++ + +D +++ ++ LC G+A A +V KD
Sbjct: 132 VAEALVKLGREDEALGIFKNLDK-FKCPQDCETVTAIITALCAEGHAKKAYGVVLHHKDK 190
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+E+ I LI GW + + A+ + +EM R G + YN L C+ + ++
Sbjct: 191 LSEVI-RPCIYRSLIYGWSMQKNVKRAREVIQEMKRNGIKPDLFCYNTFLRCLCERNVER 249
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+P L E+ V+++M + N ++N+L+S L ++RR +++ K+ M + C P+
Sbjct: 250 NPSGLVPESLNVMMEMRSYRIEPNSISYNILLSCLGRVRRVQESCKILELMKKSSCAPDW 309
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
++ ++ K LY R G+G++++D M +K YY+ + LCG+ER+ A+ +F++
Sbjct: 310 VSYYLVAKVLYLTGRFGKGNKIVDEMIERRLVPDRKFYYDLIGILCGVERVNFALKLFDQ 369
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
MK YDLL+ K C +K L+DEA+ GV V +DP K
Sbjct: 370 MKRSSSGGYGPVYDLLIPKLCIGGNFEKGKELWDEAMAMGVTVHCSSEVLDPSITK 425
>gi|15240232|ref|NP_200945.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171474|sp|Q9FLJ6.1|PP439_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61370, mitochondrial; Flags: Precursor
gi|9757858|dbj|BAB08492.1| unnamed protein product [Arabidopsis thaliana]
gi|17529064|gb|AAL38742.1| unknown protein [Arabidopsis thaliana]
gi|23296891|gb|AAN13197.1| unknown protein [Arabidopsis thaliana]
gi|332010076|gb|AED97459.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 487
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 190/384 (49%), Gaps = 9/384 (2%)
Query: 93 VTPTPSLVQSTLNF--SPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
V+P+ +LV + + + R +L F W ++ S D+ ++ +KD A+
Sbjct: 63 VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122
Query: 151 HDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
L D ++ + +T + + LV+ G+ +G F+ +++ + +D ++ ++
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 181
Query: 208 KLCENGYASYAEKLVKDTANEIFPDD-KICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC G+ A ++ + I ++ + L+ GW V + EA+R+ ++M G
Sbjct: 182 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 241
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+N +L C+ + ++P L EA ++L+M + ++N+L+S L + RR
Sbjct: 242 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 301
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++ ++ +M GC P+ ++ +++ LY R G+G++++D M G+ +K YY+
Sbjct: 302 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDL 361
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LCG+ER+ A+ +FEKMK + YDLL+ K C +K L++EA+ V
Sbjct: 362 IGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDV 421
Query: 447 EVKPKEYRVDPRYLK--KPIAVKK 468
+ +DP + KP+ +K+
Sbjct: 422 TLSCSISLLDPSVTEVFKPMKMKE 445
>gi|21593376|gb|AAM65325.1| unknown [Arabidopsis thaliana]
Length = 487
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 190/384 (49%), Gaps = 9/384 (2%)
Query: 93 VTPTPSLVQSTLNF--SPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
V+P+ +LV + + + R +L F W ++ S D+ ++ +KD A+
Sbjct: 63 VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122
Query: 151 HDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
L D ++ + +T + + LV+ G+ +G F+ +++ + +D ++ ++
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKIGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 181
Query: 208 KLCENGYASYAEKLVKDTANEIFPDD-KICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC G+ A ++ + I ++ + L+ GW V + EA+R+ ++M G
Sbjct: 182 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 241
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+N +L C+ + ++P L EA ++L+M + ++N+L+S L + RR
Sbjct: 242 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 301
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++ ++ +M GC P+ ++ +++ LY R G+G++++D M G+ +K YY+
Sbjct: 302 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDL 361
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LCG+ER+ A+ +FEKMK + YDLL+ K C +K L++EA+ V
Sbjct: 362 IGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDV 421
Query: 447 EVKPKEYRVDPRYLK--KPIAVKK 468
+ +DP + KP+ +K+
Sbjct: 422 TLSCSISLLDPSVTEVFKPMKMKE 445
>gi|222612846|gb|EEE50978.1| hypothetical protein OsJ_31562 [Oryza sativa Japonica Group]
Length = 648
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 195/413 (47%), Gaps = 23/413 (5%)
Query: 93 VTPTPSLVQSTLNFSPE---AGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA 149
V +P++V ++ E +GR +L F W DE L R D A
Sbjct: 50 VAVSPAMVARVIDACSERMGSGRRLLRFLSWCRSKDAGGIGDEALDSAIAALARMGDLTA 109
Query: 150 IHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMER----------DYGFK 196
+ + D ++ + P+T ++ LV+ G+ + + F +ER D G
Sbjct: 110 MRIAVADAEKDGRRMSPETFTVVVEALVKLGKEDEAVRLFRGLERQRLLPRRDAGDGGEG 169
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL---LIKGWCVDGKLDEAK 253
SL +V + LC G+A A+ +V +E+ + + + L+ GWCV G EA+
Sbjct: 170 VWSSSLAMV-QALCMKGHAREAQGVVWHHKSELSVEPMVSIVQRSLLHGWCVHGNAKEAR 228
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
R+ ++ LG ++N L C+ K +P L +EA VL +M GV + +
Sbjct: 229 RVLDDIKSSCTPLGLPSFNDYLHCLCHRNLKFNPSALVTEAMDVLSEMRSYGVTPDASSL 288
Query: 314 NVLISNLCKIRRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
N+L+S L + RR +++ ++ Y M G+ GC P+ ++ ++++ LY R+ G ++D M
Sbjct: 289 NILLSCLGRARRVKESYRILYLMREGKAGCSPDWVSYYLVVRVLYLTGRIIRGKRLVDDM 348
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+G K ++ + LCG E+++ + +F MK D+ TYDLL+ K C + R
Sbjct: 349 LESGVLPTAKFFHGLIGVLCGTEKVDHGLDMFRLMKR-CQLVDTHTYDLLIEKLCRNGRF 407
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRR 484
+ L+D+A +NG + E +DP ++ ++ + E+ ++K R
Sbjct: 408 ENGKELWDDAKKNGFMLGCSEDLLDPLKTERVFVSTFVGRKCVIKERFSKKYR 460
>gi|297797091|ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arabidopsis lyrata subsp.
lyrata]
gi|297312265|gb|EFH42689.1| hypothetical protein ARALYDRAFT_496296 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 203/427 (47%), Gaps = 24/427 (5%)
Query: 40 FLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSL 99
F S +P + + ++++ + G L++LE + +S V+P+ +L
Sbjct: 23 FCSHHLVDRPDRASTELQEVIRIVSSPIGG--LDDLEKNLNQVS---------VSPSSNL 71
Query: 100 VQSTLNF--SPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDN 157
V + + + R +L F W ++ + D+ + +KD AI L D
Sbjct: 72 VTQVIESCKNETSPRRLLRFFSWSCKSLGSNVHDKEFNHVLRVLAEKKDHTAIQILLSDL 131
Query: 158 KE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY 214
++ + +T + + LV+ G+ +G F+ +++ + +D ++ ++ LC G+
Sbjct: 132 RQENRAMDKQTFSIVAETLVKIGKEEDAIGIFKILDK-FLCPQDSFTVTAIISALCSRGH 190
Query: 215 ASYAEKLVKDTANEIFPDD-KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
A ++ + I ++ + L+ GW V + EA+R+ ++M G +N
Sbjct: 191 VKRALGVMHHHKDAISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNS 250
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
+L C+ + ++P L EA ++L+M + ++N+L+S L + RR ++ ++
Sbjct: 251 LLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSISYNILLSCLGRTRRVRESCQIL 310
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
+M GC P+ ++ +++ LY R G+G++++D M G K YY+ + LCG+
Sbjct: 311 EQMKRSGCDPDTASYYFVVRVLYLTGRFGKGNQIVDEMIERGLRPEHKFYYDLIGVLCGV 370
Query: 394 ERIEQAMSVFEKMK---TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
ER+ A+ +FEKMK DG+ P YDLL+ K C +K L++EA+ V +
Sbjct: 371 ERVNFALQLFEKMKRSSVDGYGP---VYDLLIPKLCKGGNFEKGKELWEEAMSLNVTLSC 427
Query: 451 KEYRVDP 457
+DP
Sbjct: 428 SISLLDP 434
>gi|78708658|gb|ABB47633.1| expressed protein [Oryza sativa Japonica Group]
Length = 658
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 184/386 (47%), Gaps = 23/386 (5%)
Query: 93 VTPTPSLVQSTLNFSPE---AGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA 149
V +P++V ++ E +GR +L F W DE L R D A
Sbjct: 50 VAVSPAMVARVIDACSERMGSGRRLLRFLSWCRSKDAGGIGDEALDSAIAALARMGDLTA 109
Query: 150 IHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMER----------DYGFK 196
+ + D ++ + P+T ++ LV+ G+ + + F +ER D G
Sbjct: 110 MRIAVADAEKDGRRMSPETFTVVVEALVKLGKEDEAVRLFRGLERQRLLPRRDAGDGGEG 169
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL---LIKGWCVDGKLDEAK 253
SL +V + LC G+A A+ +V +E+ + + + L+ GWCV G EA+
Sbjct: 170 VWSSSLAMV-QALCMKGHAREAQGVVWHHKSELSVEPMVSIVQRSLLHGWCVHGNAKEAR 228
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
R+ ++ LG ++N L C+ K +P L +EA VL +M GV + +
Sbjct: 229 RVLDDIKSSCTPLGLPSFNDYLHCLCHRNLKFNPSALVTEAMDVLSEMRSYGVTPDASSL 288
Query: 314 NVLISNLCKIRRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
N+L+S L + RR +++ ++ Y M G+ GC P+ ++ ++++ LY R+ G ++D M
Sbjct: 289 NILLSCLGRARRVKESYRILYLMREGKAGCSPDWVSYYLVVRVLYLTGRIIRGKRLVDDM 348
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+G K ++ + LCG E+++ + +F MK D+ TYDLL+ K C + R
Sbjct: 349 LESGVLPTAKFFHGLIGVLCGTEKVDHGLDMFRLMKR-CQLVDTHTYDLLIEKLCRNGRF 407
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDP 457
+ L+D+A +NG + E +DP
Sbjct: 408 ENGKELWDDAKKNGFMLGCSEDLLDP 433
>gi|218184542|gb|EEC66969.1| hypothetical protein OsI_33629 [Oryza sativa Indica Group]
Length = 648
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 195/413 (47%), Gaps = 23/413 (5%)
Query: 93 VTPTPSLVQSTLNFSPE---AGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA 149
V +P++V ++ E +GR +L F W DE L R D A
Sbjct: 50 VPVSPAMVARVIDACSERMGSGRRLLRFLSWCRSKDAGGIGDEALDSAIAALARMGDLTA 109
Query: 150 IHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMER----------DYGFK 196
+ + D ++ + P+T ++ LV+ G+ + + F +ER D G
Sbjct: 110 MRIAVADAEKDGRRMSPETFTVVVEALVKLGKEDEAVRLFRGLERQRLLPQRDAGDGGEG 169
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL---LIKGWCVDGKLDEAK 253
SL +V + LC G+A A+ +V +E+ + + + L+ GWCV G EA+
Sbjct: 170 VWSSSLAMV-QALCMKGHAREAQGVVWHHKSELSVEPMVSIVQRSLLHGWCVHGNAKEAR 228
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
R+ ++ LG ++N L C+ K +P L +EA VL +M GV + +
Sbjct: 229 RVLDDIKSSCTPLGLPSFNDYLHCLCHRNLKFNPSALVTEAMDVLSEMRSYGVTPDASSL 288
Query: 314 NVLISNLCKIRRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
N+L+S L + RR +++ ++ Y M G+ GC P+ ++ ++++ LY R+ G ++D M
Sbjct: 289 NILLSCLGRARRVKESYRILYLMREGKAGCSPDWVSYYLVVRVLYLTGRIIRGKRLVDDM 348
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+G K ++ + LCG E+++ + +F MK D+ TYDLL+ K C + R
Sbjct: 349 LESGVLPTAKFFHGLIGVLCGTEKVDHGLDMFRLMKR-CQLVDTHTYDLLIEKLCRNGRF 407
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRR 484
+ L+D+A +NG + E +DP ++ ++ + E+ ++K R
Sbjct: 408 ENGKELWDDAKKNGFMLGCSEDLLDPLKTERVFVSTFVGRKCVIKERFSKKYR 460
>gi|357131402|ref|XP_003567327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 186/382 (48%), Gaps = 21/382 (5%)
Query: 96 TPSLVQSTLNF---SPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
+P+L++ ++ S ++GR +L F W DE R D A+
Sbjct: 72 SPALIRRVVDSCSESSDSGRRLLRFLAWCRSKDLQGLGDEEHDRAIAVLARTGDLTAMRI 131
Query: 153 FLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERD-----YGFKRDKDSLRL 204
+ D+++ + P+T + ++ LV+AG+ + + F +ER G + + L
Sbjct: 132 AVGDSEKDGRRMAPETFTAVVEALVKAGKEDEAVRLFRGLERQKLLPQQGVGAGGEGIWL 191
Query: 205 ----VVEKLCENGYASYAEKLVKDTANEIFPDDKICDL---LIKGWCVDGKLDEAKRLAR 257
+V+ LC GYA A+ +V +E+ + + + L+ GWCV G EA+R+
Sbjct: 192 SSLAMVQALCMKGYAREAQGVVWHHKSELSAEPMVSIVQRTLLHGWCVHGNAKEARRVLD 251
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
++ G +G ++N L+CV K + L EA +L +M GV +FN+L+
Sbjct: 252 DIKSSGCPVGLPSFNDFLNCVCHRNLKFNASALVPEAMDILTEMRSYGVTPAASSFNILL 311
Query: 318 SNLCKIRRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
S L + RR ++A ++ Y M G+ C P+ ++ +++K LY R+ G ++ M +G
Sbjct: 312 SCLGRARRVKEAYRILYLMKEGKEKCSPDWVSYYLVVKVLYLTGRIVRGKRLVYGMLESG 371
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
K ++ + LCG E ++ A+ +F+ MK+ D+ TYDLL+ K C + R
Sbjct: 372 VIPTVKFFHGLIGILCGTEEVDHAIDMFKIMKS-CELVDTRTYDLLIEKLCRNGRFKLGK 430
Query: 436 ALFDEAVRNGVEVKPKEYRVDP 457
L+D+A +G+ + E +DP
Sbjct: 431 ELWDDATMSGLLLGCSEDLLDP 452
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 171/348 (49%), Gaps = 11/348 (3%)
Query: 116 GFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGP---KTLASCIDR 172
G W + H+ E+ + D G+ K+F+ + + + + + G +T++ I R
Sbjct: 215 GIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRR 274
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L RAGR + + F +E+ YG D ++ ++++ L + A + ++ I +
Sbjct: 275 LARAGRHQEAIHAFRNIEK-YGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFN 333
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
++LI G+C KLDEA ++ E+ + G E ++Y ++ CR+KD FR
Sbjct: 334 LASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEA---HCREKD-FR--- 386
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+KVL+ ME+ G NV TF +++ L K ++ +A+K++ +M + GC P+ + + LI
Sbjct: 387 NVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLI 446
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L +A R+ + E+++ M+ G Y ++ C + E A+++ KM+
Sbjct: 447 FILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCK 506
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
PD +TY L+ +C R+ L D +N V ++ Y + R L
Sbjct: 507 PDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGL 554
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 171/348 (49%), Gaps = 11/348 (3%)
Query: 116 GFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGP---KTLASCIDR 172
G W + H+ E+ + D G+ K+F+ + + + + + G +T++ I R
Sbjct: 192 GIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRR 251
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L RAGR + + F +E+ YG D ++ ++++ L + A + ++ I +
Sbjct: 252 LARAGRHQEAIHAFRNIEK-YGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFN 310
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
++LI G+C KLDEA ++ E+ + G E ++Y ++ CR+KD FR
Sbjct: 311 LASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEA---HCREKD-FR--- 363
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+KVL+ ME+ G NV TF +++ L K ++ +A+K++ +M + GC P+ + + LI
Sbjct: 364 NVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLI 423
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L +A R+ + E+++ M+ G Y ++ C + E A+++ KM+
Sbjct: 424 FILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCK 483
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
PD +TY L+ +C R+ L D +N V ++ Y + R L
Sbjct: 484 PDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGL 531
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 165/366 (45%), Gaps = 13/366 (3%)
Query: 86 LHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRK 145
L L S + P L+ L+ +AG F W T+ + H+ E + +
Sbjct: 89 LSLNESGIDLRPGLIVRVLSRCGDAGNLGYRFFLWATKQPGYCHSYEVCKSMVKILSKMR 148
Query: 146 DFKA----IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
F A I + +N E++ P+ I R A + + + M + YGF+ D+
Sbjct: 149 QFGAVWGLIEEMRKENPELIEPELFVVLIRRFASANMVKKAVEVLDEMPK-YGFEPDEYV 207
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+NG A K+ +D +I P+ + L+ GWC +GKL EAK + +M
Sbjct: 208 FGCLLDALCKNGSVKDASKVFEDMREKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 267
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G E V + +L + + D + L L DM G N + VLI LC
Sbjct: 268 AGLEPDIVVFTNLLSGYAHAGKMADAYDL-------LNDMRKRGYEPNANCYTVLIQALC 320
Query: 322 KI-RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ +R ++A+++F M +GC + T+ LI + + +G ++D M+ G +
Sbjct: 321 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 380
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + L E+ E+ + + EKMK G +PD Y++++ C V +A L++E
Sbjct: 381 VTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNE 440
Query: 441 AVRNGV 446
NG+
Sbjct: 441 MEANGL 446
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
E F VLI + A+++ M ++G P+E F L+ +L + V + ++ +
Sbjct: 171 ELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFED 230
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ + + L C ++ +A V +MK G PD + L++ + +
Sbjct: 231 MREK-IPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 289
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+ A L ++ + G E Y V
Sbjct: 290 MADAYDLLNDMRKRGYEPNANCYTV 314
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 164/366 (44%), Gaps = 13/366 (3%)
Query: 86 LHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRK 145
L L S + P L+ L+ +AG F W T+ + H+ E + +
Sbjct: 86 LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145
Query: 146 DFKAIHDFLVD----NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
F A+ + + N E++ P+ + R A + + + M + YG + D+
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 204
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+NG A K+ +D + P+ + L+ GWC +GKL EAK + +M
Sbjct: 205 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 264
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G E V + +L + + D + L + DM G NV + VLI LC
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDL-------MNDMRKRGFEPNVNCYTVLIQALC 317
Query: 322 KI-RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ +R ++A+++F M +GC + T+ LI + + +G ++D M+ G +
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + + E+ E+ + + EKMK G +PD Y++++ C V +A L++E
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 441 AVRNGV 446
NG+
Sbjct: 438 MEANGL 443
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 166/355 (46%), Gaps = 12/355 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+P+L+ L AG L F W + F HT E+ + + G+ K F I + +
Sbjct: 121 SPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVS 180
Query: 156 DNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
D K +L +T A R RA + + + FE+ME+ +GF+ +++ LC++
Sbjct: 181 DMKRKGILSRETFALITRRYARARKVKEAVESFEKMEK-FGFQMGVSDFNRLLDTLCKSR 239
Query: 214 YASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A+++ + F PD K +L++GW D L + + REM GFE V +
Sbjct: 240 NVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFG 299
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+++ K RK D EA ++ +ME + + F LI+ L +R ++A++
Sbjct: 300 ILINAHCK-ARKYD------EAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEF 352
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F ++ G P T+ ++ + + ++ M+D M+ +G + Y L L
Sbjct: 353 FEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIK 412
Query: 393 IERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ ++A SVF++M + G P TYD+++ +C RVD A ++DE GV
Sbjct: 413 GRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGV 467
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G E++N+LI L KI++ L M G ET F ++ + +A +V E
Sbjct: 151 GFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRET-FALITRRYARARKVKEA 209
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E ++M+ G+ +G D+ L LC +++A VF+KMK PD ++Y +L+
Sbjct: 210 VESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEG 269
Query: 425 WCAHNRVDKANALFDEAVRNGVE 447
W + K N ++ E G E
Sbjct: 270 WGQDQNLLKLNEVYREMRDEGFE 292
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 248 KLDEAKRLAREMYR-----GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
KL A LA +R GF+ T +YN +++ + K+ + + L S DM+
Sbjct: 131 KLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVS-------DMK 183
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G+ ETF ++ + R+ ++A++ F +M ++G + F L+ +L ++ V
Sbjct: 184 RKGILSR-ETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVK 242
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ E+ D+MK + K Y L + + + V+ +M+ +G PD T+ +L+
Sbjct: 243 KAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILI 302
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKP 450
C + D+A LF E ++ P
Sbjct: 303 NAHCKARKYDEAIRLFHEMEAKNIKPSP 330
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 166/355 (46%), Gaps = 12/355 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+P+L+ L AG L F W + F HT E+ + + G+ K F I + +
Sbjct: 121 SPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVS 180
Query: 156 DNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
D K +L +T A R RA + + + FE+ME+ +GF+ +++ LC++
Sbjct: 181 DMKRKGILSRETFALITRRYARARKVKEAVESFEKMEK-FGFQMGVSDFNRLLDTLCKSR 239
Query: 214 YASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A+++ + F PD K +L++GW D L + + REM GFE V +
Sbjct: 240 NVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFG 299
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+++ K RK D EA ++ +ME + + F LI+ L +R ++A++
Sbjct: 300 ILINAHCK-ARKYD------EAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEF 352
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F ++ G P T+ ++ + + ++ M+D M+ +G + Y L L
Sbjct: 353 FEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIK 412
Query: 393 IERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ ++A SVF++M + G P TYD+++ +C RVD A ++DE GV
Sbjct: 413 GRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGV 467
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G E++N+LI L KI++ L M G ET F ++ + +A +V E
Sbjct: 151 GFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRET-FALITRRYARARKVKEA 209
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E ++M+ G+ +G D+ L LC +++A VF+KMK PD ++Y +L+
Sbjct: 210 VESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEG 269
Query: 425 WCAHNRVDKANALFDEAVRNGVE 447
W + K N ++ E G E
Sbjct: 270 WGQDQNLLKLNEVYREMRDEGFE 292
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 248 KLDEAKRLAREMYR-----GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
KL A LA +R GF+ T +YN +++ + K+ + + L S DM+
Sbjct: 131 KLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVS-------DMK 183
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G+ ETF ++ + R+ ++A++ F +M ++G + F L+ +L ++ V
Sbjct: 184 RKGILSR-ETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVK 242
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ E+ D+MK + K Y L + + + V+ +M+ +G PD T+ +L+
Sbjct: 243 KAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILI 302
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKP 450
C + D+A LF E ++ P
Sbjct: 303 NAHCKARKYDEAIRLFHEMEAKNIKPSP 330
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 10/213 (4%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
P + I+ L R + L FFE+++ GF + + VV C + +YA ++
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQLKLS-GFAPEAPTYNAVVGAYCWSMKMAYAYRM 387
Query: 222 VKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVS 279
V + + + P+ + D+++ K EA + + M R G E Y+ + +
Sbjct: 388 VDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIM---IR 444
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
C ++ R+D A ++ +M+ GV + F+ LI++LC + EDA F M +
Sbjct: 445 MFCNEE---RVDM-AIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDV 500
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
G P T F L ++L R M +++K
Sbjct: 501 GIRPPATMFSNLKQALLDDGRKDTALLMAEKIK 533
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 165/364 (45%), Gaps = 11/364 (3%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V PT +L+ LN LG W + H + D GRRK F + +
Sbjct: 127 VNPTNNLISQLLNRFCNDWVPALGLFTWAKHQTGYVHPPDLYDLMVDILGRRKKFSFMWE 186
Query: 153 FLVDNKEVLGPKTLAS---CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ + + + G +L + + RL RAG + F +E+ G ++D ++L ++++ L
Sbjct: 187 LVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEAFRGIEK-LGVRKDIEALNVLMDAL 245
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ G +A + + I D + ++L+ G+C KLD+A+++ EM + GF+ V
Sbjct: 246 VKEGSVEHAYSAFMEFKDSIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVV 305
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+Y C ++ C+ KD FR E + +M+ NV T+ + + L K ++ A
Sbjct: 306 SYTCFIELY---CKLKD-FR---NVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKA 358
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
++++ M C P+ + + LI L Q+ R+ + ++ + MK G + Y +T
Sbjct: 359 LEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITS 418
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
C E A+ + +M+ D PD +TY L+ C R+ L + +N + +
Sbjct: 419 ACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISID 478
Query: 450 PKEY 453
Y
Sbjct: 479 LGTY 482
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 144/296 (48%), Gaps = 8/296 (2%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDD 233
+ GR + L F E M GF DK + ++V L + G+ +A +++ E F PD
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI 336
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ LI G C G++DEA ++ +M TV YN I +S LC++ E
Sbjct: 337 YTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI---ISTLCKENQV----EE 389
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A K+ L + G+ +V T+N LI LC R A++L+ M GCHP+E T+ +LI
Sbjct: 390 ATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLID 449
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
SL ++ E ++ M+ +G A Y + C +RI +A +F++M+ G +
Sbjct: 450 SLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSR 509
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+S TY+ L+ C RV++A+ L D+ + G+ Y Y K +KK
Sbjct: 510 NSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKA 565
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 128/291 (43%), Gaps = 11/291 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-V 222
T S I L + G + + +M ERD + + ++ LC+ A KL +
Sbjct: 338 TYNSLISGLCKLGEVDEAVKVLNQMIERDC--SPNTVTYNTIISTLCKENQVEEATKLAL 395
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
T I PD + LI+G C+ A L +EM G YN ++D LC
Sbjct: 396 VLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLID---SLC 452
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ EA +L +ME +G RNV T+N LI CK +R +A ++F +M G
Sbjct: 453 FRGKL----QEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVS 508
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N T+ LI L ++ RV E +++D+M G K Y LT C I++A +
Sbjct: 509 RNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADI 568
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ M +DG PD TY L+ C RV+ A L G+ + P Y
Sbjct: 569 VQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAY 619
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 8/257 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC + + A +L K+ + PD+ ++LI C GKL EA L +EM G
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ YN ++D C+ K R+ +EAE++ ME GV RN T+N LI LCK
Sbjct: 472 CARNVITYNTLID---GFCKNK---RI-AEAEEIFDQMELQGVSRNSVTYNTLIDGLCKS 524
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R E+A +L +M G P++ T+ L+ +A + + +++ M S G Y
Sbjct: 525 ERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTY 584
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC R+E A + ++ G N Y+ ++ R +A LF E +
Sbjct: 585 GTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIE 644
Query: 444 NGVEVKPKEYRVDPRYL 460
Y++ R L
Sbjct: 645 KAEAPDAVTYKIVFRGL 661
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 172/430 (40%), Gaps = 78/430 (18%)
Query: 94 TPTPSLVQSTLNFSP----------EAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGR 143
T T S + + NF+P E A++ +W ++ NF + G+
Sbjct: 42 TTTNSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGK 101
Query: 144 RKDFKAIHDFLVDNK---EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDY------- 193
+F A+ D L + K V+ +L I+ G ++L F + ME ++
Sbjct: 102 AGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTH 161
Query: 194 ----------------------------GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
G + D + ++++ LC A L+++
Sbjct: 162 FYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEM 221
Query: 226 AN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ + PD+K +++G+ +G LD A R+ +M G + V N +++ K R
Sbjct: 222 EDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRI 281
Query: 285 KDPFRLDSEA--------EKVLLDMEYNGVPR---------------------NVETFNV 315
++ R E +K +M NG+ + ++ T+N
Sbjct: 282 EEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNS 341
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LIS LCK+ ++A+K+ +M E C PN T+ +I +L + +V E ++ + G
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC AM ++++MKT G +PD TY++L+ C ++ +A
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461
Query: 436 ALFDEAVRNG 445
L E +G
Sbjct: 462 NLLKEMEVSG 471
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + R + F++ME G R+ + +++ LC++ A +L+
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQ-GVSRNSVTYNTLIDGLCKSERVEEASQLMDQ 536
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E + PD + L+ +C G + +A + + M G E V Y + ++ LC+
Sbjct: 537 MIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTL---IAGLCK 593
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R+++ A K+L ++ G+ +N +I L + +RS++A++LF M E P
Sbjct: 594 AG---RVEA-ATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAP 649
Query: 344 NETTFLVLIKSLYQAAR-VGEGDEMIDRMKSAGYAIGKKDYY 384
+ T+ ++ + L Q +GE + + M GY +Y
Sbjct: 650 DAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFY 691
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 10/281 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TAN 227
+ L R + V+ F + FK + V+ KL + G + ++K+ +
Sbjct: 60 LHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISL 119
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ +D + + I+ + G +E + M E G VA + + + +
Sbjct: 120 SVIDNDSLL-VFIESYASFGLYNEILQFVDAME---VEFGVVANTHFYNFLLNVLVDGNK 175
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+L A +M G+ +V TFN+LI LC+ + AI L M ++G P+E T
Sbjct: 176 LKLVEIAHS---NMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKT 232
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F +++ + + + ++M AG + + C RIE+A+ E+M
Sbjct: 233 FTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMS 292
Query: 408 T-DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+G PD T+++L+ V A + D +R G +
Sbjct: 293 LREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 162/361 (44%), Gaps = 13/361 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S + P L+ L+ +AG F W T+ + H+ E + + F A+
Sbjct: 91 SGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAV 150
Query: 151 HDFLVD----NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
+ + N E++ P+ + R A + + + M + YG + D+ ++
Sbjct: 151 WGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYVFGCLL 209
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ LC+NG A K+ +D + P+ + L+ GWC +GKL EAK + +M G E
Sbjct: 210 DALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEP 269
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI-RR 325
V + +L + + D + L + DM G NV + VLI LC+ +R
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDL-------MNDMRKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
++A+++F M +GC + T+ LI + + +G ++D M+ G + Y +
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ E+ E+ + + EKMK G +PD Y++++ C V +A L++E NG
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 446 V 446
+
Sbjct: 443 L 443
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 12/355 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+P+LV L AG L F W + F + E+ + D G+ K F I + +
Sbjct: 112 SPALVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVN 171
Query: 156 DNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
D K VL +T A R R+G+ + + FE+ME+ +G K + +++ L ++
Sbjct: 172 DMKRKGVLTKETFALISRRYARSGKVKEAMNTFEKMEK-FGLKIESTDFNRLLDTLIKSR 230
Query: 214 YASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A+ + K PD K +L++GW + L + + REM GFE V Y
Sbjct: 231 QVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYG 290
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+++ K+ RK D +A ++ +ME + F LI+ L +RR +A++
Sbjct: 291 ILINAYCKV-RKYD------DAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEF 343
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F R G P T+ ++ + + R+ + M+D M+ +G + Y L L
Sbjct: 344 FRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIK 403
Query: 393 IERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E+ +A SVFEKM ++ P TYD+++ +C ++V+ A ++D GV
Sbjct: 404 AEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGV 458
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 143/280 (51%), Gaps = 11/280 (3%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDD 233
+ GR +VL F + M + GF+ D+ + +V LC G+ +A +++ E F PD
Sbjct: 293 KEGRIEEVLSFIDEMSNE-GFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDI 351
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ LI G C G+++EA + +M F TV YN + +S LC++ E
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTL---ISTLCKENQV----EE 404
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A ++ + G+ +V TFN LI LC A++LF M GCHP+E T+ +LI
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID 464
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
SL R+ E ++ M+S+G + Y + C +RIE+A +F++M+ G +
Sbjct: 465 SLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISR 524
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ TY+ L+ C + RV++A L D+ + G +KP ++
Sbjct: 525 NVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG--LKPDKF 562
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T S I L + G + + +M RD F + + ++ LC+ A +L +
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRD--FSPNTVTYNTLISTLCKENQVEEATELAR 410
Query: 224 D-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
T+ I PD + LI+G C+ A L EM G YN ++D LC
Sbjct: 411 VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID---SLC 467
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ RL+ EA +L +ME +G RNV T+N LI CK +R E+A ++F M G
Sbjct: 468 SRG---RLE-EALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N T+ LI L + RV E +++D+M G K Y LT C I++A +
Sbjct: 524 RNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADI 583
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ M ++G PDS TY L+ RV+ A+ L G+ + P+ Y
Sbjct: 584 VQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTY 634
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 8/274 (2%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD 246
R+ G D + +++ LC A +L ++ + PD+ ++LI C
Sbjct: 410 RVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSR 469
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+L+EA L +EM G V YN ++D C+ K R++ EAE++ +ME G+
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLID---GFCKNK---RIE-EAEEIFDEMELQGI 522
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
RNV T+N LI LCK RR E+A +L +M G P++ T+ L+ +A + + +
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAAD 582
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ M S G Y + L R+E A + ++ G +TY+ ++
Sbjct: 583 IVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALF 642
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
R +A LF E + G Y+V R L
Sbjct: 643 REKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGL 676
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + FE M + G D+ + ++++ LC G A L+K+
Sbjct: 423 TFNSLIQGLCLTNNHRLAMELFEEM-KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKE 481
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + + + LI G+C + +++EA+ + EM G V YN ++D LC+
Sbjct: 482 MESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID---GLCK 538
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R EA +++ M G+ + T+N L++ C+ + A + M GC P
Sbjct: 539 N----RRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEP 594
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L +A RV ++ ++ G + + Y + L +R +A+ +F
Sbjct: 595 DSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLF 654
Query: 404 EKMKTDGHNPDSETYDLLMTKWCA 427
+M G PD+ TY ++ C+
Sbjct: 655 REMMEKGDPPDAVTYKVVFRGLCS 678
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 145/371 (39%), Gaps = 22/371 (5%)
Query: 90 FSHVTPTPSLVQSTLNFSPEAGR----------AILGFNHWLTQNANFSHTDETLSFFTD 139
FS ++P+P+ Q NF+P+ R +IL W ++ NF +
Sbjct: 55 FSTLSPSPT-TQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLR 113
Query: 140 YFGRRKDFKAIHDFLVDNKEV---LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFK 196
G+ F ++ L + K + T I+ + + + + ME ++G K
Sbjct: 114 KLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLK 173
Query: 197 RDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
D + ++ L + E + + + I PD ++LIK C ++ A +
Sbjct: 174 LDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILM 233
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
EM G + ++ + R+ + M G P + T NV
Sbjct: 234 MEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQ-------MVAAGCPSSNVTVNV 286
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ CK R E+ + M G P+ TF L+ L + V E++D M G
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ Y + LC + +E+A+ + +M +P++ TY+ L++ C N+V++A
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406
Query: 436 ALFDEAVRNGV 446
L G+
Sbjct: 407 ELARVLTSKGI 417
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 8/211 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+LI+ + DEA + M G +L YN +L+ + + +L E
Sbjct: 145 ILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVD----GNKLKL---VEI 197
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
V M G+ +V TFN+LI LC+ + AI + MG +G P+E TF L++
Sbjct: 198 VNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFI 257
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ + + ++M +AG + C RIE+ +S ++M +G PD
Sbjct: 258 EEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRF 317
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
T++ L+ C V A + D ++ G +
Sbjct: 318 TFNSLVNGLCRIGHVKHALEILDVMLQEGFD 348
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 140/284 (49%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ I+ + GR LG+ ++ D GF+ D+ + V LC+NG+ S+A K++
Sbjct: 269 TVNVLINGYCKMGRVEDALGYIQQEIAD-GFEPDQVTYNTFVHGLCQNGHVSHALKVMDL 327
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E PD + +I +G+LDEAK + +M G T +N ++ +S R
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR 387
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ L E + G+ +V TFN+LI+ LCK+ I+LF M GC P
Sbjct: 388 LEEALDLARE-------LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ +LI L ++G ++++ M+S G Y + LC RIE+A VF
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M G + + T++ L+ C R+D A L ++ V+ G++
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQ 544
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 153/363 (42%), Gaps = 27/363 (7%)
Query: 117 FNHWLTQNANFSHTDETLSFFT------DYF------------GRRKDFKAIHDFLVDNK 158
F H L QN + SH + + D F G + K I + +VD
Sbjct: 308 FVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 367
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+ T + I L R + L + G D + +++ LC+ G
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVK-GLSPDVYTFNILINALCKVGDPHLG 426
Query: 219 EKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+L ++ ++ PD+ ++LI C GKL A L EM G TV YN I+D
Sbjct: 427 IRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDA 486
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LC+K R++ EAE+V M+ G+ R+ TFN LI LCK +R +DA +L +M
Sbjct: 487 ---LCKK---MRIE-EAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 539
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ G PN T+ ++ + + + ++++ M + G+ I Y + LC R +
Sbjct: 540 KEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 599
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
A+ + M+ G P + Y+ ++ N + A LF E G Y++
Sbjct: 600 VALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVF 659
Query: 458 RYL 460
R L
Sbjct: 660 RSL 662
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 131/309 (42%), Gaps = 30/309 (9%)
Query: 144 RKDF---KAIHDFLVDNKEVLGPKTLASCIDRLVR----AGRPTQVLGFFERMERDYGFK 196
R+DF A+++ +V G L + R +R R V F E R +
Sbjct: 82 REDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYAR---LR 138
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
R D++ LV+ +L + + A+ +V + + ++L++G KL + +
Sbjct: 139 RFDDAVDLVLNQLDNDTFGVQADTVVFN---------HLLNVLVEG----SKLKLLESVY 185
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM G + V N + + LCR A +L +M +GV + TF L
Sbjct: 186 NEMTGRGIQPDVVTLNTL---IKALCRAHQV----RTAVLMLEEMSSHGVAPDETTFTTL 238
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ + E A+++ +M E GC P T VLI + RV + I + + G+
Sbjct: 239 MQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGF 298
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y F+ LC + A+ V + M +GH+PD TY+ ++ + +D+A
Sbjct: 299 EPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 358
Query: 437 LFDEAVRNG 445
+ ++ V G
Sbjct: 359 IVNQMVDRG 367
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D +L +++ LC A ++++ +++ + PD+ L++G+ +G ++ A
Sbjct: 192 GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAA 251
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
R+ +M G V N +++ K+ R +D ++ + D G + T
Sbjct: 252 LRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDAL---GYIQQEIAD----GFEPDQVT 304
Query: 313 FNVLISNLCKIRRSEDAIK-----------------------------------LFYRMG 337
+N + LC+ A+K + +M
Sbjct: 305 YNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV 364
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ GC P+ TTF LI +L R+ E ++ + G + + + LC +
Sbjct: 365 DRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPH 424
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ +FE+MK+ G PD TY++L+ C+ ++ A L +E NG
Sbjct: 425 LGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P + + +++ G D + L REM R G ++ V ++ ++L R
Sbjct: 87 PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARL------RRF 140
Query: 291 DSEAEKVL--LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
D + VL LD + GV + FN L++ L + + + ++ M G P+ T
Sbjct: 141 DDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTL 200
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LIK+L +A +V M++ M S G A + + + IE A+ V KM
Sbjct: 201 NTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMME 260
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G +P T ++L+ +C RV+ A + + +G E
Sbjct: 261 AGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFE 299
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 185/447 (41%), Gaps = 21/447 (4%)
Query: 36 HYLNFLSKP--FSSKPTSNPKTIDDPDQVIARSLSGELLENLE--ADPLPISQRLHLIFS 91
H+ + LS P S+ S+ + DP+ + + E+ L DP +R FS
Sbjct: 16 HFFHSLSSPKTHHSRLFSSQTILQDPNSLSSSQYINEISRILSDFRDPHHDLERPLTAFS 75
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIH 151
TP LV+ L G + F W + F H+ E+ D G K F I
Sbjct: 76 Q-KITPGLVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIW 134
Query: 152 DFLVDNKEV----LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
DFL D +E + P+ RA P + F +M D+G K + ++
Sbjct: 135 DFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMG-DFGVKAGVGDVDQLLY 193
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC+ + A++ E+ P+ K +L++GW G EA++L EM G +
Sbjct: 194 VLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVD 253
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
VAYN +L+ LC+ + EA K+ +M NG+ + ++++ I C++
Sbjct: 254 VVAYNSLLE---ALCKGGNV----DEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIH 306
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A ++ RM + PN T+ ++K L ++ +V E +++D M G + Y
Sbjct: 307 SAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQ 366
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C + +A+ + +M+ + PD TY++++ R D+ ++ G
Sbjct: 367 AFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFY 426
Query: 448 VKPKEYRVDPRYLKKPIAVKKGKKRET 474
Y V + KKGK E
Sbjct: 427 PAASTYAV----MVHGFCKKKGKLEEA 449
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 167/367 (45%), Gaps = 13/367 (3%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V+ + SLV+ L GF W + H+ + + D G+ K F + +
Sbjct: 115 VSVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWE 174
Query: 153 FLVDNKEVLGP----KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
LV+ + LG T+ + RL RA R + F MER +G K+D ++ +++
Sbjct: 175 -LVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMER-FGVKKDTLAMNTLMDA 232
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
L + +A + + + I + ++LI GWC K+D A + EM GF
Sbjct: 233 LVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDV 292
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
++Y I V CR+KD +++S VL +ME G P NV T+ +++ L K +
Sbjct: 293 ISYTSI---VEAYCREKDFRKVNS----VLNEMEEKGCPPNVVTYTIVMHALGKGKEISK 345
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A++++ +M C P+ + + LI L +A R+ + ++ + M G Y ++
Sbjct: 346 ALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMIS 405
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
C + E A+ + KM+ PD TY L+ C +NR+ +AL + +N + +
Sbjct: 406 AACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISL 465
Query: 449 KPKEYRV 455
+ Y +
Sbjct: 466 EVGTYSL 472
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 82/207 (39%), Gaps = 8/207 (3%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G+ +YN ++D + KL + + L E +++ G ++ T ++ L +
Sbjct: 148 GYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRL-------GGYVSLATMTKVMRRLAR 200
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
R +DAI+ F M +G + L+ +L + V +++ K + +
Sbjct: 201 ASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDS-ILLNPHT 259
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + C +++ A+ +MK G PD +Y ++ +C K N++ +E
Sbjct: 260 FNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEME 319
Query: 443 RNGVEVKPKEYRVDPRYLKKPIAVKKG 469
G Y + L K + K
Sbjct: 320 EKGCPPNVVTYTIVMHALGKGKEISKA 346
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 12/365 (3%)
Query: 86 LHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRK 145
L L S V L + LN +AG F W ++ + H+ E G+ +
Sbjct: 110 LALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMR 169
Query: 146 DFKAIHDFLVD----NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
F A+ + + N + + P + R A + + + M + YG + D+
Sbjct: 170 QFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPK-YGCEPDEHV 228
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+NG A L +D P K L+ GWC +GKL EAK + ++
Sbjct: 229 FGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIRE 288
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
GFE V YN +L + + D + L L +M NV +F LI LC
Sbjct: 289 AGFEPDIVVYNNLLTGYAAAGKMVDAYDL-------LKEMRRKECEPNVMSFTTLIQALC 341
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
++ E+A+++F+ M GC + T+ LI + ++ +G E++D M G+
Sbjct: 342 AKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPM 401
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + E +E+ + + E+M+ G PD Y++++ C + + +++E
Sbjct: 402 TYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEM 461
Query: 442 VRNGV 446
G+
Sbjct: 462 EATGL 466
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 144/284 (50%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ I+ + GR LG+ ++ E GF+ D+ + V LC+NG+ +A K++
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQ-EIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDV 315
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E PD ++++ C +G+L+EAK + +M G +N + + LC
Sbjct: 316 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTL---IVALCS 372
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RL+ EA + + G+ +V TFN+LI+ LCK+ + A++LF M GC P
Sbjct: 373 GN---RLE-EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ LI +L ++G+ +++ M+SAG Y + LC RIE+A VF
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF 488
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M G + ++ T++ L+ C R+D AN L + + G++
Sbjct: 489 DQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQ 532
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 148/348 (42%), Gaps = 27/348 (7%)
Query: 117 FNHWLTQNANFSHTDETLSFFT------DYF------------GRRKDFKAIHDFLVDNK 158
F + L QN + H + + D F G+ ++ K I + +V+
Sbjct: 296 FVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERG 355
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+ T + I L R + L ++ G D + +++ LC+ G A
Sbjct: 356 CLPDITTFNTLIVALCSGNRLEEALDLARQVTLK-GLSPDVYTFNILINALCKVGDPQLA 414
Query: 219 EKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+L ++ ++ PD+ + LI C GKL +A L +EM G TV YN I+D
Sbjct: 415 LRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIID- 473
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LC+K R++ EAE+V M+ G+ RN TFN LI LCK +R +DA +L +M
Sbjct: 474 --GLCKK---MRIE-EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMI 527
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
G PN T+ ++ + + + +++ M + G+ + Y + LC R +
Sbjct: 528 SEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ 587
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A+ + M+ G + Y+ ++ N A LF E G
Sbjct: 588 VALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVG 635
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 130/321 (40%), Gaps = 36/321 (11%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L + G L + M ++ G D + +VV LC+NG A+ ++
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQE-GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD + LI C +L+EA LAR++ G +N + ++ LC+
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNIL---INALCK 407
Query: 284 KKDP---FRLDSE----------------------------AEKVLLDMEYNGVPRNVET 312
DP RL E A +L +ME G PR+ T
Sbjct: 408 VGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVT 467
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +I LCK R E+A ++F +M G N TF LI L + R+ + +++I +M
Sbjct: 468 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMI 527
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S G Y LT C I++A + + M +G D TY L+ C R
Sbjct: 528 SEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ 587
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A L G+ PK Y
Sbjct: 588 VALKLLRGMRIKGMRATPKAY 608
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 11/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L RA + + E M G D+ + +++ E G A + VK
Sbjct: 187 TFNTLMKALCRAHQVRTAVLMLEEMSSS-GVAPDETTFTTLMQGFVEEGSIKAALR-VKA 244
Query: 225 TANEI--FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E+ P ++LI G+C G++++A ++ GFE + YN V+ LC
Sbjct: 245 RMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTF---VNGLC 301
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ A KV+ M G +V T+N++++ LCK + E+A + +M E GC
Sbjct: 302 QNGHV----GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCL 357
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ TTF LI +L R+ E ++ ++ G + + + LC + + A+ +
Sbjct: 358 PDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRL 417
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
FE+MK+ G PD TY+ L+ C+ ++ KA L E G
Sbjct: 418 FEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 9/258 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ L + G P L FE M + G D+ + +++ LC G A L+K+ +
Sbjct: 402 INALCKVGDPQLALRLFEEM-KSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + + +I G C +++EA+ + +M G + +N ++D LC+ K
Sbjct: 461 CPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID---GLCKDK--- 514
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+D +A +++ M G+ N T+N ++++ CK + A + M G + T+
Sbjct: 515 RID-DANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTY 573
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L +A R +++ M+ G K Y + L AM++F +M
Sbjct: 574 GTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTE 633
Query: 409 DGHNPDSETYDLLMTKWC 426
G PD+ TY ++ C
Sbjct: 634 VGEPPDAFTYKIVFRGLC 651
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ + ++L++G K+ + + EM G + V +N ++ LCR
Sbjct: 154 NHLLNVLVEG----SKMKLLETVYSEMGERGIKPDVVTFNTLM---KALCRAHQV----R 202
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A +L +M +GV + TF L+ + + A+++ RM E GC P + T VLI
Sbjct: 203 TAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLI 262
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ RV + I + + G+ + Y F+ LC + A+ V + M +GH+
Sbjct: 263 NGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD 322
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY++++ C + ++++A + ++ V G
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERG 355
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ + +N L++ L + + + ++ MGE G P+ TF L+K+L +A +V
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
M++ M S+G A + + + I+ A+ V +M G +P T ++L+
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264
Query: 425 WCAHNRVDKANALFDEAVRNGVE 447
+C RV+ A + + NG E
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFE 287
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 168/381 (44%), Gaps = 11/381 (2%)
Query: 41 LSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLV 100
LS + P N + ++ A + LL+ + Q L + + PT ++V
Sbjct: 27 LSLSSFTHPNLNTINLTVEEETSATQIKNSLLKARNGSVQDLVQSLGIGCPGIQPTSNIV 86
Query: 101 QSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDN--K 158
L+ + ++ LG W + N+ HT S D G+ + + D L D +
Sbjct: 87 DGLLSKFGDDWKSALGLFQWAQSSGNYKHTAYACSRMIDLLGKMRQIDQMWDLLSDMHCR 146
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
++ + A+ I RL A R + F+++ D G +R+ +++ ++++ LC+ A
Sbjct: 147 GLVTVEAAATSIRRLAGARRWKDAVLLFDKLG-DMGLERNTETMNVLLDALCKEKKVEVA 205
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
K+ + I PD ++ + GWC ++DEA EM GF + Y +L+
Sbjct: 206 RKVFLVLSPHIQPDAYTFNIFVHGWCSARRIDEAMWTIEEMKAQGFPPSVITYTTVLEAY 265
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
K+ FR+ E +L M G NV T+ +++++L K E+A+ + +RM
Sbjct: 266 C----KQHNFRMVYE---ILDSMSSEGCHPNVITYTMIMTSLAKCHMFEEALSVSHRMKS 318
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMID-RMKSAGYAIGKKDYYEFLTRLCGIERIE 397
GC P+ + LI L +A + E ++ M G Y ++ C + E
Sbjct: 319 SGCKPDTLFYNSLINLLGKAGHLSEASQVFQVEMPMNGVPRSLATYNTMISVFCYKDLDE 378
Query: 398 QAMSVFEKMKTDGHNPDSETY 418
A+SV ++M+T PD +TY
Sbjct: 379 DALSVLKEMETQSCKPDLQTY 399
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ RN ET NVL+ LCK ++ E A K+F + P+ TF + + A R+ E
Sbjct: 181 GLERNTETMNVLLDALCKEKKVEVARKVFLVLSP-HIQPDAYTFNIFVHGWCSARRIDEA 239
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
I+ MK+ G+ Y L C + + M ++G +P+ TY ++MT
Sbjct: 240 MWTIEEMKAQGFPPSVITYTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVITYTMIMT 298
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL-LDMEYNGVPR 308
+EA ++ M G + T+ YN +++ + K SEA +V ++M NGVPR
Sbjct: 307 EEALSVSHRMKSSGCKPDTLFYNSLINLLGKAGHL-------SEASQVFQVEMPMNGVPR 359
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE-- 366
++ T+N +IS C EDA+ + M C P+ T+ L++ +R G+ D
Sbjct: 360 SLATYNTMISVFCYKDLDEDALSVLKEMETQSCKPDLQTYRPLLRLFL--SRRGQDDTVR 417
Query: 367 --MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ + M + Y + LC + + A +F++M P T +LL+++
Sbjct: 418 NLLNELMNKHSLGLDLDTYTLLIHGLCRVGETDWAYRLFDEMVGSEIVPRYRTCELLLSE 477
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ I+ + GR LG+ ++ D GF+ D+ + V LC+NG+ +A K++
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIAD-GFEPDRVTFSTFVNGLCQNGHVDHALKVLGL 326
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E PD +I C +G+L+EAK + +M G T +N + + LC
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTL---IVALCT 383
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA + ++ G+ NV TFN+LI+ LCK+ A++LF M GC P
Sbjct: 384 ENQL----EEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTP 439
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ +LI +L + ++ + +++ M+ +G Y + LC RIE+A VF
Sbjct: 440 DEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVF 499
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M G ++ T++ L+ C R+D A L D+ + G++
Sbjct: 500 DQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQ 543
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 9/305 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G ++ K I + +VD+ + T + I L + + L + G + +
Sbjct: 350 GELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVK-GLSPNVYT 408
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC+ G A +L ++ ++ PD+ ++LI C GKL +A L +EM
Sbjct: 409 FNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEME 468
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G TV YN I+D LC+++ R++ EAE+V M+ G+ RN TFN LI L
Sbjct: 469 VSGCPQSTVTYNTIID---GLCKRR---RIE-EAEEVFDQMDVTGIGRNAITFNTLIDGL 521
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C R +DA +L +M G PN T+ ++ + + + +++ M + G+ +
Sbjct: 522 CNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDV 581
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC R + A+ + M+ G P + Y+ ++ N A +LF E
Sbjct: 582 VTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFRE 641
Query: 441 AVRNG 445
G
Sbjct: 642 MTEVG 646
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 118/263 (44%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G + D + V++ LC A A ++++ ++ ++ PD+ L++G+ +G ++ A
Sbjct: 191 GIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAA 250
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
RL M G +V N +++ KL R D ++ + D G + T
Sbjct: 251 LRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL---GYIQQEIAD----GFEPDRVT 303
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
F+ ++ LC+ + A+K+ M + GC P+ T+ +I L + E ++++M
Sbjct: 304 FSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMV 363
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+G + + LC ++E+A+ + ++ G +P+ T+++L+ C
Sbjct: 364 DSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPH 423
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A LF+E +G Y +
Sbjct: 424 LAVRLFEEMKSSGCTPDEVTYNI 446
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM G E V +N ++D LCR + A +L +M V + TF L+
Sbjct: 186 EMSSQGIEPDVVTFNTVID---ALCRARQA----RTAVLMLEEMSSCDVAPDETTFTTLM 238
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ E A++L RM E GC P T VLI + RVG+ I + + G+
Sbjct: 239 EGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFE 298
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ + F+ LC ++ A+ V M +G PD TY ++ C + +++A +
Sbjct: 299 PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGI 358
Query: 438 FDEAVRNG 445
++ V +G
Sbjct: 359 VNQMVDSG 366
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 9/258 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ L + G P + FE M + G D+ + ++++ LC +G + A L+K+
Sbjct: 413 INALCKVGDPHLAVRLFEEM-KSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + + +I G C +++EA+ + +M G + +N ++D LC +
Sbjct: 472 CPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLID---GLCNAE--- 525
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+D AE V + P NV T+N ++++ CK A + M G + T+
Sbjct: 526 RIDDAAELVDQMISEGLQPNNV-TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTY 584
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L +A R +++ M+ G K Y + L A+S+F +M
Sbjct: 585 ATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTE 644
Query: 409 DGHNPDSETYDLLMTKWC 426
G PD+ TY ++ C
Sbjct: 645 VGGPPDAFTYKIVFRGLC 662
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 12/365 (3%)
Query: 86 LHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRK 145
L L S V L + LN +AG F W ++ + H+ E G+ +
Sbjct: 77 LALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMR 136
Query: 146 DFKA----IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
F A I + +N + + P + R A + + + M + YG + D+
Sbjct: 137 QFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPK-YGCEPDEHV 195
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+NG A L +D P K L+ GWC +GKL EAK + ++
Sbjct: 196 FGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIRE 255
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
GFE V YN +L + + D + L L +M NV +F LI LC
Sbjct: 256 AGFEPDIVVYNNLLTGYAAAGKMVDAYDL-------LKEMRRKECEPNVMSFTTLIQALC 308
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
++ E+A+++F+ M GC + T+ LI + ++ +G E++D M G+
Sbjct: 309 AKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPM 368
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + E +E+ + + E+M+ G PD Y++++ C + + +++E
Sbjct: 369 TYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEM 428
Query: 442 VRNGV 446
G+
Sbjct: 429 EATGL 433
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 167/388 (43%), Gaps = 37/388 (9%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
+ V +P+L++ L AG L W F HT + + G+ K FK I
Sbjct: 90 ASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLI 149
Query: 151 HDFLVD--NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ + D K++L T A R RA + + + F +ME DYGFK + +++
Sbjct: 150 WNLVDDMKQKKLLSKDTFALISRRYARARKVKEAITAFHKME-DYGFKMESSDFNRMLDI 208
Query: 209 LCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
L ++ A+K+ + F PD K +L++GW + L + EM GFE
Sbjct: 209 LSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPD 268
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSE---------------------AEKVLLD-MEY-- 303
VAY I++ K + + R +E +EK L D +E+
Sbjct: 269 VVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 328
Query: 304 ----NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+G P T+N L+ C +R EDA K M G PN T+ +++ L +
Sbjct: 329 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQ 388
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSETY 418
R E E+ +M YE + R+ C ER++ A+ ++++MK G P +
Sbjct: 389 RTKEAYEVYQKMSCEPTV----STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMF 444
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
L+T C N++D+A F+E + G+
Sbjct: 445 SSLITALCHENKLDEACEYFNEMLDVGI 472
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +N LI +L KI++ + L M + +T F ++ + +A +V E
Sbjct: 125 GFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQKKLLSKDT-FALISRRYARARKVKEA 183
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+M+ G+ + D+ L L + A VF+KMK PD ++Y +L+
Sbjct: 184 ITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 243
Query: 425 WCAHNRVDKANALFDEAVRNGVE 447
W + + N ++ E G E
Sbjct: 244 WGQELNLLRVNEVYGEMKDEGFE 266
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 117/300 (39%), Gaps = 70/300 (23%)
Query: 248 KLDEAKRLAREMYRG-----GFELGTVAYNCILDCVSKLCR-----------------KK 285
KL A LA +++ GF+ T YN +++ + K+ + K
Sbjct: 105 KLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQKKLLSK 164
Query: 286 DPFRLDS----------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
D F L S EA ME G FN ++ L K R DA K+F +
Sbjct: 165 DTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDK 224
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY-----AIG--------KKD 382
M + P+ ++ +L++ Q + +E+ MK G+ A G K
Sbjct: 225 MKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKK 284
Query: 383 YYE-------------------FLTRLCGI---ERIEQAMSVFEKMKTDGHNPDSETYDL 420
Y E F + + G+ +++ A+ FE+ K+ G ++ TY+
Sbjct: 285 YDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNA 344
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMA 480
L+ +C R++ A DE G+ + Y + +L I +++ K+ + +KM+
Sbjct: 345 LVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHL---IRMQRTKEAYEVYQKMS 401
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 171/389 (43%), Gaps = 39/389 (10%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
+ V +P+L++ L AG L W F HT + + G+ K FK I
Sbjct: 88 ASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLI 147
Query: 151 HDFLVDN---KEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
LVD+ K++L +T A R RA + + +G F +ME ++GFK + +++
Sbjct: 148 WS-LVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKME-EFGFKMESSDFNRMLD 205
Query: 208 KLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
L ++ A+K+ + F PD K +L++GW + L + REM GFE
Sbjct: 206 TLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEP 265
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSE---------------------AEKVLLD-MEY- 303
VAY I++ K + ++ R +E +EK L D +E+
Sbjct: 266 DVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 325
Query: 304 -----NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+G P T+N L+ C +R EDA K M G PN T+ +++ L +
Sbjct: 326 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRM 385
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSET 417
R E E+ M YE + R+ C ER++ A+ ++++MK G P
Sbjct: 386 QRSKEAYEVYQTMSCEPTV----STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHM 441
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ L+T C N++D+A F+E + G+
Sbjct: 442 FSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 93/238 (39%), Gaps = 32/238 (13%)
Query: 248 KLDEAKRLAREMYRG-----GFELGTVAYNCILDCVSKLCR-----------------KK 285
KL A LA +++ GF+ T YN +++ + K+ + K
Sbjct: 103 KLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSK 162
Query: 286 DPFRLDS----------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ F L S EA ME G FN ++ L K R DA K+F +
Sbjct: 163 ETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDK 222
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M + P+ ++ +L++ Q + DE+ MK G+ Y + C ++
Sbjct: 223 MKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK 282
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
E+A+ F +M+ P + L+ + +++ A F+ + +G ++ Y
Sbjct: 283 YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 147/345 (42%), Gaps = 46/345 (13%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
+ +PSLV L AG L F W + F + E+ + + G+ K FK I
Sbjct: 119 IKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKGFKYNTESYNALIEALGKIKQFKLIRS 178
Query: 153 FL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ + ++++L T A R RA + + + FERME ++GFK + +++ LC
Sbjct: 179 LVNEMKSRKLLNKDTFALISRRHARARKVEEAIEAFERME-EFGFKLETSDFNRLLDTLC 237
Query: 211 ENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
++ + A K+ F PD K +L++GW + L
Sbjct: 238 KSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNL-------------------- 277
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
RLD +V L+M+Y+G +V T+ +LIS CK ++ + A
Sbjct: 278 ------------------LRLD----EVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAA 315
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
I+LF+ M C P + LI L R+ E E +R KS G+ Y +
Sbjct: 316 IELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGA 375
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
C RI+ A V ++M+ P+S TYD+++ R ++A
Sbjct: 376 YCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEA 420
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G N E++N LI L KI++ + L M N+ TF ++ + +A +V E
Sbjct: 152 GFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKL-LNKDTFALISRRHARARKVEEA 210
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E +RM+ G+ + D+ L LC +E+A VF+KMK PD ++Y +L+
Sbjct: 211 IEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEG 270
Query: 425 WCAHNRVDKANALFDEAVRNGVE 447
W + + + + ++ E +G E
Sbjct: 271 WGKEHNLLRLDEVYLEMKYDGFE 293
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 156/360 (43%), Gaps = 12/360 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA- 149
S V P L++ LN +AG F W + + H+ E + + F A
Sbjct: 107 SGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAV 166
Query: 150 ---IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
I + +N +++ P+ + R A + + + M + +GF+ D+ ++
Sbjct: 167 WGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPK-FGFEPDEYVFGCLL 225
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ LC++G A KL +D + + L+ GWC GK+ EAK + +M GFE
Sbjct: 226 DALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEP 285
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V Y +L + + D + L L DM G N + VLI LCK+ R
Sbjct: 286 DIVDYTNLLSGYANAGKMADAYDL-------LRDMRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+A+K+F M + C + T+ L+ + ++ + ++D M G + Y
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHI 398
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ E E+ + + EKM+ ++PD Y++++ C V +A L++E NG+
Sbjct: 399 MVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL 458
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 12/188 (6%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A +VL +M G + F L+ LCK +DA KLF M N F L+
Sbjct: 201 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLL 259
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ ++ E ++ +M AG+ DY L+ ++ A + M+ G
Sbjct: 260 YGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE 319
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYLK 461
P++ Y +L+ C +R+++A +F E R E Y ++D Y+
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIV 379
Query: 462 KPIAVKKG 469
+KKG
Sbjct: 380 LDDMIKKG 387
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 193/476 (40%), Gaps = 67/476 (14%)
Query: 14 LQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPD-QVIARSLSGELL 72
L + F SP + +P+ L F PF + P ++P + I R LS
Sbjct: 16 LSKSTSHFESPTVQFIQ--NPSRSLKFHIFPFHTSLLHKP---NNPHAETICRILS---- 66
Query: 73 ENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDE 132
P+ +S R V +P LV + LN AG L F W + F+H E
Sbjct: 67 -TTPESPVDVSLRNF----PVEVSPELVVAVLNKLSNAGILALSFFRWAEKQQGFNHNTE 121
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVD---NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
+ G+ + FK I + LVD +++L T + R VRA + L FERM
Sbjct: 122 IFHALIEALGKIRQFKMIWN-LVDEMKQRKLLNGDTFSLIARRYVRAKVIKEALKTFERM 180
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF---------PDDKICDLLI 240
E+ YG K +++ LC++ + + EK A E+F P+ K +LI
Sbjct: 181 EK-YGLKPQISDFNKLIDVLCKSKF--HVEK-----AQELFDKMRQWNLEPNLKSYTILI 232
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK--------------LCRKKD 286
+GW L + + REM GF+ V Y I++ K L + +
Sbjct: 233 EGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVN 292
Query: 287 P---------------FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
P R+D EA + + +G P T+N ++S C R +DA +
Sbjct: 293 PSPHIYCTFITGLGNGSRMD-EAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYR 351
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL- 390
+ M E G PN T+ +++ L + R E + RM S Y + R+
Sbjct: 352 IVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMF 411
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
C +++ AM V+ +MK G P + L+ C N++D A F + + G+
Sbjct: 412 CNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGI 467
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 11/211 (5%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
HD L N P + I L R + FFE+ + GF + + VV C
Sbjct: 284 HDMLSKNVNP-SPHIYCTFITGLGNGSRMDEAFEFFEK-SKASGFPPEAPTYNAVVSAYC 341
Query: 211 ENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY-RGGFELGT 268
+ A ++V + I P+ + D+++ G+ EA + + M G E
Sbjct: 342 WSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSV 401
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
Y + V C + +LD A V +M+ G+ + F+ LI +LC + +D
Sbjct: 402 STYAIM---VRMFCNEN---QLDM-AMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDD 454
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
A + F +M + G P F ++L A
Sbjct: 455 ACRYFQQMLDVGIRPTANMFSAFKRALMAAG 485
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 152/317 (47%), Gaps = 11/317 (3%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLAS---C 169
A GF W + H+ ++ + D G+ K F + + E+ G +LA+
Sbjct: 142 AAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKV 201
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ RL A R T + F +M++ +G +D ++ ++++ LC+ A ++ +
Sbjct: 202 MRRLAGASRWTDAIDAFNKMDQ-FGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGSV 260
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD+ + L+ GWC ++EA+ + +EM GF+ + Y +++ C +KD F+
Sbjct: 261 PPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIE---AYCMEKD-FQ 316
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+L +M G P NV T+ +++ L K R+++A+ +F ++ GC P+ + +
Sbjct: 317 ---TVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYN 373
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI L +A R+ + + ++D+M+ G + ++ C + E A+ + KM+
Sbjct: 374 SLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQ 433
Query: 410 GHNPDSETYDLLMTKWC 426
PD +TY L+ C
Sbjct: 434 SCKPDIKTYTPLLKLCC 450
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 155/351 (44%), Gaps = 12/351 (3%)
Query: 99 LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRK--DF--KAIHDFL 154
+V LN G A++ F +W + S ++ + GRRK DF K +H+
Sbjct: 135 VVAEVLNRGNLGGEAMIMFFNWAIKQPMISKDVDSYNVVIRALGRRKFIDFMVKFLHELR 194
Query: 155 VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY 214
V+ + +T + ID LVRA R + + F +E ++GF+RD +SL ++++ LC +
Sbjct: 195 VEGVS-MNSETFSIVIDSLVRARRVYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSH 253
Query: 215 ASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
A +I + +++I GW G++ E +R+ EM GF ++++ +
Sbjct: 254 VGAANSYFNSVKGKIPFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYL 313
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
L+ + + + +D A + ME G + +N +ISN + ++ +K +
Sbjct: 314 LEGLGRAGKIED-------AVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYR 366
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+ C PN T+ +I L +A++V + EM D M G F+ LC
Sbjct: 367 CLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFG 426
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
AM ++ K + G Y LL+ + + ++DE +G
Sbjct: 427 PPHAAMVIYTKARKVGCKISLSAYKLLLMRLSRFGKCGMMLKIWDEMQESG 477
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 110/273 (40%), Gaps = 16/273 (5%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDK-----IC 236
++ FF + +D DS +V+ L + + K + + E + +
Sbjct: 150 MIMFFNWAIKQPMISKDVDSYNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVI 209
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
D L++ V + L E GFE + N +L C LCR+ +S
Sbjct: 210 DSLVRARRVYKAIQMFGNLEEEF---GFERDAESLNVLLQC---LCRRSHVGAANSYFNS 263
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
V +P N T+NV+I K R + ++F M E G P+ +F L++ L
Sbjct: 264 V-----KGKIPFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLG 318
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+A ++ + + M+ G Y ++ + ++ M + + + +P+ +
Sbjct: 319 RAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNID 378
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
TY +++ ++V A +FDE + G+ K
Sbjct: 379 TYTRMISGLIKASKVADALEMFDEMLDRGMVTK 411
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 7/329 (2%)
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASCIDRLVRAGRPTQV 182
A S + D GR + F A +V+ P+T A R V AG Q
Sbjct: 97 AASSRAADAYDAVVDALGRARQFDAAWRLVVEAAADGAATPRTFAVLARRYVAAGMTRQA 156
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKG 242
+ F+ ME G + D +++ LC+ Y A ++ + P++K+ +LI G
Sbjct: 157 VRAFDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYG 216
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD---SEAEKVLL 299
WC + D A++ ++M G E V YN +L+ + + +R D AE +L
Sbjct: 217 WCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLK 276
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+M G+ NV +++V++ + + E + +F M E G P T+ +IK L
Sbjct: 277 EMHQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCG 336
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH--NPDSET 417
R+ + + ++D M S G Y F G + + A+ ++ KMK G PD T
Sbjct: 337 RLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHT 396
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y++L+ + N+ D ++++ + V
Sbjct: 397 YNILLGMFIKLNQHDTVMQVWNDMCESTV 425
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 3/149 (2%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
R + ++ ++ L + R+ + A +L G TF VL + A +
Sbjct: 101 RAADAYDAVVDALGRARQFDAAWRLVVEAAADGA-ATPRTFAVLARRYVAAGMTRQAVRA 159
Query: 368 IDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
D M++ G ++ L LC + + A VF K K + P+ + Y +L+ WC
Sbjct: 160 FDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYK-YEPNEKMYTVLIYGWC 218
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRV 455
NR D A + + +G+E Y +
Sbjct: 219 KVNRNDMAQKFLKDMIYHGIEPNIVTYNI 247
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 174/358 (48%), Gaps = 17/358 (4%)
Query: 84 QRLHLIFS-----HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFT 138
+ LH +F+ + + LV L + ++ LG W + +F H+ E+
Sbjct: 57 ETLHTLFNDQACDFIPLSRDLVHRLLWRYKDDWKSALGVFRWASSRPSFRHSSESYDMMV 116
Query: 139 DYFGRRKDFKAIHDFLVDNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFK 196
D GR K + + D L + +E ++ T+A + R V AG+ + F+ ++ G +
Sbjct: 117 DILGRMKVMEKLRDLLEEMREGGLVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQA-LGLE 175
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
++ +S+ L+++ LC+ + A ++ + I P+ ++ I GWC ++DEA
Sbjct: 176 KNTESMNLLLDTLCKEKFVQQAREIFLELKQHIAPNAHTFNIFIHGWCKICRVDEAHWTI 235
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+EM GF ++Y+ ++ C C++ + R+ ++L +M+ G NV T+ +
Sbjct: 236 QEMKGYGFHPCVISYSTLIQCY---CQEGNFSRV----YELLDEMQAQGCSANVITYTSI 288
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID-RMKSAG 375
+ L K ++ E+A+K+ RM GC P+ F LI +L +A R+ + ++ M AG
Sbjct: 289 MCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAG 348
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK-TDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y ++ C + ++A+ + ++M+ + G PD++TY L+ ++D
Sbjct: 349 VSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKID 406
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+ +A R+ ++ G E T + N +LD LC++K +A ++ L+++ +
Sbjct: 157 GQWVDAVRIFDDLQALGLEKNTESMNLLLD---TLCKEK----FVQQAREIFLELKQHIA 209
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P N TFN+ I CKI R ++A M +G HP ++ LI+ Q E
Sbjct: 210 P-NAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISYSTLIQCYCQEGNFSRVYE 268
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++D M++ G + Y + L ++ E+A+ V E+M++ G PD+ ++ L+
Sbjct: 269 LLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLG 328
Query: 427 AHNRVDKANALFD-EAVRNGVEVKPKEY 453
R+D A +F E + GV Y
Sbjct: 329 RAGRLDDAADVFKVEMPKAGVSPNTSTY 356
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 184/416 (44%), Gaps = 28/416 (6%)
Query: 50 TSNPKTIDDPDQVIARSLSGELLE---NLEADPLPISQRLHLI---FS------------ 91
S +T DP+ ++ G+L E N ADP +S+ +I F+
Sbjct: 170 VSQGETDSDPETDGDENVGGDLDEVNVNSGADPEEVSRVCRVIDELFALDRNMEAVLDEC 229
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIH 151
+V + +LV L A + F W Q A F+H T + GR + F+++
Sbjct: 230 NVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMM 289
Query: 152 DFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L + K +L +T + I A + +G FE M+R Y F D++ +++ L
Sbjct: 290 GMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKR-YNFDAGVDTINCLLDNL 348
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
A+ L + + P+ + +L+ GWC L EA R EM GF+ +
Sbjct: 349 GRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDII 408
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
A++ +L+ + K C+KK S+A K+ M+ G NV T+ +LI +LCK + ++A
Sbjct: 409 AHHTMLEGLLK-CKKK------SDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEA 461
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
++ F M + GC P+ + LI ++ + ++ MK G + Y +
Sbjct: 462 VEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKL 521
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ + + A+ +++KM +G P TY+++M + + A++ E R G
Sbjct: 522 MTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKG 577
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 18/245 (7%)
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M R F+ G NC+LD + + +L EA+ + +E P N+ T+ VL++
Sbjct: 329 MKRYNFDAGVDTINCLLDNLGRA-------KLGKEAQALFEKLEDRFTP-NLRTYTVLLN 380
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C+I+ +A + + M + G P+ +++ L + + + ++ + MK+ G +
Sbjct: 381 GWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSP 440
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ Y + LC ++++A+ F++M G PD+ Y L+T + ++DK AL
Sbjct: 441 NVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALL 500
Query: 439 DEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPK 498
E G + Y A+ K +P+ R +++ Q +
Sbjct: 501 KEMKEKGCPADGRTYN----------ALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTY 550
Query: 499 RMMMR 503
MMM+
Sbjct: 551 NMMMK 555
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN----GYASYAEKLVKDT 225
++ L++ + + + FE M + G + + +++ LC+ Y +++V
Sbjct: 414 LEGLLKCKKKSDAIKLFEVM-KAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSG 472
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
PD + LI G+ K+D+ L +EM G YN ++ ++
Sbjct: 473 CQ---PDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNR---- 525
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
++ +A ++ M NG+ + T+N+++ + R E ++ MG GC P++
Sbjct: 526 ---QMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDD 582
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+++V I L + R E ++ M G + DY +F + + + K
Sbjct: 583 NSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARK 642
Query: 406 MKTDG 410
MK +G
Sbjct: 643 MKFEG 647
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 149/343 (43%), Gaps = 13/343 (3%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V T LV L A GF W+ + H ++ D G+ K F +
Sbjct: 187 VRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWG 246
Query: 153 FLVDNKEVLGPK---TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ EV G T+ + RL A R T+ + F +M+R +G +D ++ ++++ L
Sbjct: 247 LINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDR-FGVVKDTKAMNVLLDTL 305
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
C+ A + ++ I PD+ + L+ GWC L EA EM + GF V
Sbjct: 306 CKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVV 365
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSED 328
Y + V C +KD + LLD M P NV T+ +L+ L K R+ +
Sbjct: 366 TYTSL---VEAYCMEKD-----FQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTRE 417
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+ F ++ E G P+ + + LI L +A R+ + +++ M++ G A + ++
Sbjct: 418 ALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLIS 477
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
C + E A+ + KM+ NPD +TY L+ C V
Sbjct: 478 AACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 520
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 141/284 (49%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ I+ + GR LG+ ++ D GF+ D+ + V LC+NG+ S+A K++
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIAD-GFEPDQVTYNTFVHCLCQNGHVSHALKVMDL 325
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E PD + +I +G+LDEAK + +M G T +N + + LC
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTL---IVALCS 382
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ RL+ EA + ++ G+ +V TFN+LI+ LCK+ I+LF M GC P
Sbjct: 383 QN---RLE-EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ +LI L ++ +++ M+S G Y + LC RIE+A VF
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M G + + T++ L+ C R+D A L ++ V+ G++
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQ 542
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 148/348 (42%), Gaps = 27/348 (7%)
Query: 117 FNHWLTQNANFSHTDETLSFFT------DYF------------GRRKDFKAIHDFLVDNK 158
F H L QN + SH + + D F G + K I + +VD
Sbjct: 306 FVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+ T + I L R + L + G D + +++ LC+ G
Sbjct: 366 CLPDTTTFNTLIVALCSQNRLEEALDLARELTVK-GLSPDVYTFNILINALCKVGDPHLG 424
Query: 219 EKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+L ++ ++ PD+ ++LI C GKL A L +EM G TV YN I+D
Sbjct: 425 IRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDA 484
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ K R + EAE+V M+ +G+ R+ TFN LI LCK +R +DA +L +M
Sbjct: 485 LCKQMRIE-------EAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 537
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ G P+ T+ ++ + + + ++++ M + G+ I Y + LC R +
Sbjct: 538 KEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 597
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A+ + M+ G P + Y+ ++ N + A +LF E G
Sbjct: 598 VALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 135/323 (41%), Gaps = 11/323 (3%)
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRA---GRPTQVLGFFERMERDY 193
F + + R + F D + + G + + + L+ G ++L D
Sbjct: 130 FVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDR 189
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D +L +++ LC A ++++ +++ + PD+ L++G+ +G ++ A
Sbjct: 190 GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAA 249
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
R+ +M G V N +++ K+ R +D +K + D G + T
Sbjct: 250 LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDAL---GYIQKEIAD----GFEPDQVT 302
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N + LC+ A+K+ M + G P+ T+ +I L + + E ++++M
Sbjct: 303 YNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV 362
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G + + LC R+E+A+ + ++ G +PD T+++L+ C
Sbjct: 363 DRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPH 422
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
LF+E +G Y +
Sbjct: 423 LGIRLFEEMKSSGCAPDEVTYNI 445
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 9/243 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAR-EMYRG 262
+++KL G E LV++ E + ++ + + D+A L R ++
Sbjct: 95 IIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTF 154
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + T YN +L+ +++ R K E V +M G+ +V T N LI LC+
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMK-------LLESVYNEMTDRGIQPDVVTLNTLIKALCR 207
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ A+ + M P+ETTF L++ + + + +M G + +
Sbjct: 208 AHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVT 267
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ C + R+E A+ +K DG PD TY+ + C + V A + D +
Sbjct: 268 VNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLML 327
Query: 443 RNG 445
+ G
Sbjct: 328 QEG 330
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 10/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I +L AG + G M R+ G + +R VE A LV++ N
Sbjct: 96 IQKLGTAGAFDLMEGLVREMRRE-GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTF 154
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ D + + L+ ++ + + EM G + V N + + LCR
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL---IKALCRAHQV 211
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
A +L +M + V + TF L+ + E A+++ +M E GC P T
Sbjct: 212 ----RTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVT 267
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
VLI + RV + I + + G+ + Y F+ LC + A+ V + M
Sbjct: 268 VNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLML 327
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+GH+PD TY+ ++ + +D+A + ++ V G
Sbjct: 328 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 165/399 (41%), Gaps = 40/399 (10%)
Query: 83 SQRLHLIFSHVTPTP---SLVQSTLNFSPEAGRAI-----LGFNHWLTQNANFSHTDETL 134
S L L FSH + +P SLV + I L F +W T F+H E
Sbjct: 86 SHSLSLDFSHFSTSPVSPSLVSHVIEKCAAVRHGIPFFQALSFFNWATSRPGFTHHPEPY 145
Query: 135 SFFTDYFGRRKDFK---AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMER 191
+ D G+ ++F + D + + +T + I R VRAG ++ + F RME
Sbjct: 146 NEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRME- 204
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDE 251
DY K DK + +++ LC A+ A+ ++ PD + L++GWC G + E
Sbjct: 205 DYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPE 264
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSK---LCRKKDPF-------------------R 289
A+R+ EM G Y ++D + + + R D F R
Sbjct: 265 AERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLR 324
Query: 290 LDSEA---EKVLL---DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +A EKVL M+ G P + T+N LI + CK ++A+K+ M + GC P
Sbjct: 325 VHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSP 384
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N +TF L S+ + V + +MK Y + + + + +
Sbjct: 385 NASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLK 444
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
++M D P+ TY +L+ +C + A F E V
Sbjct: 445 KEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMV 483
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ID L R G+ T+ F M D G + + + ++ + G ++
Sbjct: 283 TYTIVIDALCRCGQITRAHDVFAEM-LDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQ 341
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D + + LI+ C DG LDEA ++ M + G +N + ++KL
Sbjct: 342 MKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRD 401
Query: 284 KKDPFRL------------------------DSEAEKVLL----DMEYNGVPRNVETFNV 315
RL D+++ ++L +M+ + V NV T+ V
Sbjct: 402 VNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCV 461
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGC-HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LI+ C + +A K F M E C P+ + +++ L +A ++ + +E++ M
Sbjct: 462 LIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDR 521
Query: 375 GYA 377
G+A
Sbjct: 522 GFA 524
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 182/446 (40%), Gaps = 48/446 (10%)
Query: 78 DPLPISQRLHLIFSHVTPT-----PSLVQSTLNFSPEAGRAI-----LGFNHWLTQNANF 127
DP L L FS + T PS+V+ + S I L F +W + F
Sbjct: 31 DPTYTISSLSLDFSQIISTVRSISPSIVRHVIAQSSAVRHGIPVPQVLAFFNWASNQDGF 90
Query: 128 SHTDETLSFFTDYFGRRKDFKAIHDF--LVDNKEV-LGPKTLASCIDRLVRAGRPTQVLG 184
+ E + D+ G+ F F L+ + V + +T + R VRAG + +
Sbjct: 91 RKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRYVRAGLAAEAIH 150
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWC 244
F RME DY K DK + +++ LC AS A++ ++ PD + L++GWC
Sbjct: 151 AFNRME-DYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDKFEPDVIVYTNLVRGWC 209
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV---SKLCRKKDPF------------- 288
G + EA+R+ EM G + Y+ ++D + ++ R D F
Sbjct: 210 RAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSI 269
Query: 289 ------RLDSEA---EKVLL---DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
R+ +A EKVL M+ G + T+N LI CK EDAIK+ M
Sbjct: 270 TYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLM 329
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ GC PN +TF L + + V M +MK Y + +
Sbjct: 330 AKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKST 389
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK--EYR 454
+ + + +M + P+ TY +L+T +C + A F E + ++P Y
Sbjct: 390 DMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKC-LRPSLPVYD 448
Query: 455 VDPRYLKKPIAVKKGKKRETLPEKMA 480
+ + L+K + KK E L EKM
Sbjct: 449 MVLQQLRK---AGQLKKHEELVEKMV 471
>gi|255581311|ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528920|gb|EEF30916.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 518
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 184/417 (44%), Gaps = 21/417 (5%)
Query: 38 LNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLI---FSHVT 94
++F S P + PKT SL+ +L +L+ +P + + L+ I
Sbjct: 1 MSFSSLPRFLSLSIAPKTSKISTLHFTTSLADKLYTHLQNNPNNVEKSLNSIKPKLDTRC 60
Query: 95 PTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD-- 152
T L + +LN S R F W +N+ H+ S F +++ +A+ D
Sbjct: 61 VTEVLHKCSLNNSQIGLR----FFVWAGYQSNYRHSSFLYSKACKLFNIKQNPQAVLDLF 116
Query: 153 -FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
F K V+ KT ++ L + G R +++ + D + +V+ C+
Sbjct: 117 EFYRAEKCVVNLKTFKVVLN-LCKEGTLANEAFLVLRKMQEFDIQADTKAYTIVIRLFCD 175
Query: 212 NGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
G A+KL+ + + N+++PD +IKG+C G+L+EA RL +EM G V
Sbjct: 176 KGDMDMAQKLMGEMSFNDLYPDMVTYVSIIKGFCDIGRLEEACRLVKEMRAHGCVPNVVV 235
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG--VPRNVETFNVLISNLCKIRRSED 328
Y+ ++D +CR F A ++L ME G NV T+ +I LC+ R+ D
Sbjct: 236 YSTLVD---GICR----FGSVERALELLGGMEKEGGDCNPNVLTYTSVIQGLCEKGRTMD 288
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A + RM GC PN T L+K L + E ++IDR+ + G Y +
Sbjct: 289 AFAVLDRMEACGCAPNRVTVSTLLKRLCMDGHLEEAYKLIDRVVAGGSVSSCDCYSPIVV 348
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L I+++E+A +F + G PD L++ + C NRV L DE + G
Sbjct: 349 CLIRIKKVEEAEKLFRRAVVSGVKPDGLACSLMIKELCFVNRVLDGYCLHDEIEKIG 405
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 2/143 (1%)
Query: 309 NVETFNVLISNLCK-IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N++TF V++ NLCK + +A + +M E+ + + ++I+ + ++
Sbjct: 127 NLKTFKVVL-NLCKEGTLANEAFLVLRKMQEFDIQADTKAYTIVIRLFCDKGDMDMAQKL 185
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M Y + C I R+E+A + ++M+ G P+ Y L+ C
Sbjct: 186 MGEMSFNDLYPDMVTYVSIIKGFCDIGRLEEACRLVKEMRAHGCVPNVVVYSTLVDGICR 245
Query: 428 HNRVDKANALFDEAVRNGVEVKP 450
V++A L + G + P
Sbjct: 246 FGSVERALELLGGMEKEGGDCNP 268
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 149/343 (43%), Gaps = 13/343 (3%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V T LV L A GF W+ + H ++ D G+ K F +
Sbjct: 128 VRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWG 187
Query: 153 FLVDNKEVLGPK---TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ EV G T+ + RL A R T+ + F +M+R +G +D ++ ++++ L
Sbjct: 188 LINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDR-FGVVKDTKAMNVLLDTL 246
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
C+ A + ++ I PD+ + L+ GWC L EA EM + GF V
Sbjct: 247 CKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVV 306
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSED 328
Y + V C +KD + LLD M P NV T+ +L+ L K R+ +
Sbjct: 307 TYTSL---VEAYCMEKD-----FQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTRE 358
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+ F ++ E G P+ + + LI L +A R+ + +++ M++ G A + ++
Sbjct: 359 ALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLIS 418
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
C + E A+ + KM+ NPD +TY L+ C V
Sbjct: 419 AACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 461
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 190/442 (42%), Gaps = 55/442 (12%)
Query: 21 FISPQSTYFSRF--SPTHYLNFLSKPFSSKPTSNPKTIDDP-DQVIARSLSGELLENLEA 77
F+ + ++ R S +Y +F P + +++ P D IA+ + LE+
Sbjct: 2 FLFQKGSHLHRLLLSKKYYYHF---PLPRNAVTIADSVEHPSDATIAKLV-------LES 51
Query: 78 DPLPISQRLHLIFSHVTPTPSLVQSTL----NFSPEAGRAILGFNHWLTQNANFSHTDET 133
DP +S+ L + TP LV + N P +A+ F H + +++H+ +
Sbjct: 52 DPRTVSEAL--TKPTIQWTPDLVNKVMKRLWNHGP---KALQFFKHLDRHHPSYTHSPSS 106
Query: 134 LSFFTDYFGRRKDFKAIHDFLVDNKEV-LGP--KTLASCIDRLVRAGRPTQVLGFFERME 190
D R +DF + + + + LGP KTLA +R G+P + + F M
Sbjct: 107 FDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMA 166
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLD 250
++G ++D S +++ LC++ A L+K + PD ++L G+C+ +
Sbjct: 167 -EHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLIKRTP 225
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE----------------- 293
A R+ +EM + G E V YN +L + + K+ + E
Sbjct: 226 MALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVI 285
Query: 294 -----------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-C 341
A++V +M GV NV T+N LI LCK E+A+ +F M G C
Sbjct: 286 HGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVC 345
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T+ V+I+ L + ++RM G + Y + C +E+A+
Sbjct: 346 VPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALE 405
Query: 402 VFEKMKTDGHNPDSETYDLLMT 423
VF KM P+ +TY++L++
Sbjct: 406 VFGKMGDGSCLPNLDTYNVLIS 427
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 8/218 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P K +L + + +GK A R M G ++N +LD LC+ K R+
Sbjct: 137 PSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDI---LCKSK---RV 190
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
++ A +L + P V T+N+L + C I+R+ A+++ M + G P T+
Sbjct: 191 ET-AHSLLKTLTSRFRPDTV-TYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNT 248
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++K +++ ++ E E MK I Y + +++A VF +M +G
Sbjct: 249 MLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEG 308
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
P+ TY+ L+ C + V+ A +F+E R GV V
Sbjct: 309 VVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCV 346
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
V+ G A+++ + E + P+ + LI+ C ++ A + EM R G
Sbjct: 284 VIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREG 343
Query: 264 FEL-GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
+ V YN + + LC D R E+ M +G+ V+T+NV+I C
Sbjct: 344 VCVPNVVTYNVV---IRGLCHVGDMERALGFMER----MGEHGLRACVQTYNVVIRYFCD 396
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
E A+++F +MG+ C PN T+ VLI +++
Sbjct: 397 AGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMF 430
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 1/149 (0%)
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
LD + + +F+ + ++R A L RM P+ T +L +
Sbjct: 93 LDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASN 152
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ M G + L LC +R+E A S+ + + T PD+ TY
Sbjct: 153 GKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTL-TSRFRPDTVTY 211
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++L +C R A + E V+ G+E
Sbjct: 212 NILANGYCLIKRTPMALRVLKEMVQRGIE 240
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 149/343 (43%), Gaps = 13/343 (3%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V T LV L A GF W+ + H ++ D G+ K F +
Sbjct: 1407 VRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWG 1466
Query: 153 FLVDNKEVLGPK---TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ EV G T+ + RL A R T+ + F +M+R +G +D ++ ++++ L
Sbjct: 1467 LINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDR-FGVVKDTKAMNVLLDTL 1525
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
C+ A + ++ I PD+ + L+ GWC L EA EM + GF V
Sbjct: 1526 CKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVV 1585
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSED 328
Y + V C +KD + LLD M P NV T+ +L+ L K R+ +
Sbjct: 1586 TYTSL---VEAYCMEKD-----FQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTRE 1637
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+ F ++ E G P+ + + LI L +A R+ + +++ M++ G A + ++
Sbjct: 1638 ALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLIS 1697
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
C + E A+ + KM+ NPD +TY L+ C V
Sbjct: 1698 AACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 1740
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 149/343 (43%), Gaps = 13/343 (3%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V T LV L A GF W+ + H ++ D G+ K F +
Sbjct: 1448 VRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWG 1507
Query: 153 FLVDNKEVLGPK---TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ EV G T+ + RL A R T+ + F +M+R +G +D ++ ++++ L
Sbjct: 1508 LINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDR-FGVVKDTKAMNVLLDTL 1566
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
C+ A + ++ I PD+ + L+ GWC L EA EM + GF V
Sbjct: 1567 CKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVV 1626
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSED 328
Y + V C +KD + LLD M P NV T+ +L+ L K R+ +
Sbjct: 1627 TYTSL---VEAYCMEKD-----FQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTRE 1678
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+ F ++ E G P+ + + LI L +A R+ + +++ M++ G A + ++
Sbjct: 1679 ALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLIS 1738
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
C + E A+ + KM+ NPD +TY L+ C V
Sbjct: 1739 AACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 1781
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 181/419 (43%), Gaps = 31/419 (7%)
Query: 33 SPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSH 92
S TH L F T+ P+ D + I R LS ++A + +
Sbjct: 40 SKTHTLAF--------HTAQPRPTPDA-EAICRILSTTPASTVDACLAAVPAK------- 83
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
P+P LV LN AG L F W + + F HT E + G+ + FK I
Sbjct: 84 --PSPELVLEVLNKLSNAGVLALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWT 141
Query: 153 FLVDNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ D K+ +L T + R RA + + + FE+ME YG K +V+ LC
Sbjct: 142 LVNDMKQRKLLTSDTFSLVARRYARARKAKEAIKTFEKMEH-YGLKPHVSDFNKLVDVLC 200
Query: 211 ENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
++ A ++ K + PD K +L++GW L + + REM GF+L V
Sbjct: 201 KSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVV 260
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
AY I++ C+ K + D EA + +M+ GV + + LI+ L +R ++A
Sbjct: 261 AYGIIMNA---HCKAK---KFD-EAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEA 313
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
++ F G P T+ ++ + + R+ + M+ MK G + + L
Sbjct: 314 LEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIVLHH 373
Query: 390 LCGIERIEQAMSVFEKMKTD--GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L RIE+A SVF +M G P TY++++ +C +D A A++DE G+
Sbjct: 374 LIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKGKGI 432
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 10/237 (4%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVD 246
R D GF+ D + +++ C+ A L + A + P + LI G D
Sbjct: 248 REMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSD 307
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
+LDEA GF YN ++ R D +R+ E +K G+
Sbjct: 308 KRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKC-------GI 360
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEG 364
N TF++++ +L K RR E+A +F RM GE+GC P+ +T+ ++++ +
Sbjct: 361 GPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMA 420
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ D MK G G + + LC ++++A F++M G P ++ + L
Sbjct: 421 VAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTL 477
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 245 VDGKLDEAKRLAREMYRGG-----FELGTVAYNCILDCVSKLCRKKDPFRL--DSEAEKV 297
V KL A LA +R F+ T A++ +++ + K+ + K + L D + K+
Sbjct: 92 VLNKLSNAGVLALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWTLVNDMKQRKL 151
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L +TF+++ + R++++AIK F +M +G P+ + F L+ L +
Sbjct: 152 LTS----------DTFSLVARRYARARKAKEAIKTFEKMEHYGLKPHVSDFNKLVDVLCK 201
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ V E E+ D+M+ K Y L + + + V +M+ G D
Sbjct: 202 SKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVVA 261
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
Y ++M C + D+A L+ E GV P Y
Sbjct: 262 YGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVY 297
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
E F+ LI L KIR+ + L M + ++T F ++ + +A + E +
Sbjct: 118 HTTEAFHALIEALGKIRQFKMIWTLVNDMKQRKLLTSDT-FSLVARRYARARKAKEAIKT 176
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
++M+ G D+ + + LC + +E+A VF+KM+ +PD ++Y +L+ W
Sbjct: 177 FEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQ 236
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ K N + E G ++ Y +
Sbjct: 237 QQNLIKVNEVCREMEDKGFQLDVVAYGI 264
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 162/360 (45%), Gaps = 7/360 (1%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
+T + SL+ TL + L F H+ + S T + D + + F
Sbjct: 65 ITLSSSLLHQTLLRLRHNSKIALSFFHYSLSLPSSSVNTTTYNLIIDILSKVRQFDVSWQ 124
Query: 153 FLVD-NKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
++ ++ L P T I RL+ AG Q + F+ ME ++ +++ L
Sbjct: 125 LIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAFDDMESFIAETVNQTHFCFLLDTL 184
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
C+ GY A ++ P+ +I +LI GWC G++D A+R REM G E V
Sbjct: 185 CKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVV 244
Query: 270 AYNCILDCVSKLCRKKDPFRLDS---EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
YN +LD + + + + R + +A+KV +M G+ +V +F++L+ + +
Sbjct: 245 TYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILLHVYSRAHKP 304
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+ + M E G P T+ ++K L R+ + +E++++M G + Y F
Sbjct: 305 QLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCF 364
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G + E A+ ++ K++ + +P TY++L+ + NR + N ++++ +G
Sbjct: 365 FKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSG 424
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N T+N++I L K+R+ + + +L +M + PN TFL+LI+ L A +
Sbjct: 102 NTTTYNLIIDILSKVRQFDVSWQLIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAF 161
Query: 369 DRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
D M+S + + + L LC I+ A+ VF K K P+ Y +L+ WC
Sbjct: 162 DDMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFR-FLPNVRIYTVLIYGWCK 220
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRV 455
R+D A E G+E Y V
Sbjct: 221 IGRIDMAERFIREMDEMGIEANVVTYNV 248
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR-------- 360
NV + VLI CKI R + A + M E G N T+ VL+ + + A+
Sbjct: 207 NVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFE 266
Query: 361 --VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + D++ D M+ G + L + + + + M+ G P TY
Sbjct: 267 RTIMKADKVFDEMRQKGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEMGICPTVATY 326
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
++ C+ R+D A L ++ VRNGV Y
Sbjct: 327 TSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATY 361
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 29/172 (16%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL---------DCVSKLCRKK---- 285
++K C G++D+A+ L +M R G YNC + KL RK
Sbjct: 329 VLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQEN 388
Query: 286 --DP------------FRLD--SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
DP +L+ + ++ D+ +G +++++ +L+ LC+ ++ + A
Sbjct: 389 LCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKA 448
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ F M E G P + TF +L L Q+ + + ++ A G +
Sbjct: 449 CQFFVEMIEKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKLDEESIAFGSE 500
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 145/329 (44%), Gaps = 7/329 (2%)
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASCIDRLVRAGRPTQV 182
A S + D GR + F A +V+ P+T A R V AG Q
Sbjct: 97 AASSRAADAYDAVVDALGRARQFDAAWRLVVEAAADGAATPRTFAVLARRYVAAGMTRQA 156
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKG 242
+ F+ ME G + D +++ LC+ Y A ++ + P++K+ +LI G
Sbjct: 157 VRAFDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYG 216
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD---SEAEKVLL 299
WC + D A++ ++M G E V YN +L+ + + +R D AE +L
Sbjct: 217 WCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLK 276
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+M G+ +V +++V++ + + E + +F M E G P T+ +IK L
Sbjct: 277 EMHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCG 336
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH--NPDSET 417
R+ + + ++D M S G Y F G + + A+ ++ KMK G PD T
Sbjct: 337 RLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHT 396
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y++L+ + N+ D ++++ + V
Sbjct: 397 YNILLGMFIKLNQHDTVMQVWNDMCESTV 425
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 103/268 (38%), Gaps = 19/268 (7%)
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
R D+ VV+ L A +LV + A + + +L + + G +A R
Sbjct: 101 RAADAYDAVVDALGRARQFDAAWRLVVEAAADGAATPRTFAVLARRYVAAGMTRQAVRAF 160
Query: 257 REMYR-GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
+M G E + +LD LC+ K P A +V +Y P N + + V
Sbjct: 161 DDMEAFVGREPDAAEFTTLLD---TLCKYKYP----KVAAEVFNKRKYKYEP-NEKMYTV 212
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR----------VGEGD 365
LI CK+ R++ A K M G PN T+ +L+ + + A V +
Sbjct: 213 LIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAE 272
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+++ M G Y L + E + +F MK G P TY ++
Sbjct: 273 DLLKEMHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCL 332
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ R+D A +L DE GV P Y
Sbjct: 333 ASCGRLDDAESLLDEMASEGVCPSPATY 360
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 3/149 (2%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
R + ++ ++ L + R+ + A +L G TF VL + A +
Sbjct: 101 RAADAYDAVVDALGRARQFDAAWRLVVEAAADGA-ATPRTFAVLARRYVAAGMTRQAVRA 159
Query: 368 IDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
D M++ G ++ L LC + + A VF K K + P+ + Y +L+ WC
Sbjct: 160 FDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYK-YEPNEKMYTVLIYGWC 218
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRV 455
NR D A + + +G+E Y +
Sbjct: 219 KVNRNDMAQKFLKDMIYHGIEPNIVTYNI 247
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 150/342 (43%), Gaps = 11/342 (3%)
Query: 99 LVQSTLNFSPEAGRAILGFNHWLTQNANFSHT---DETLSFFTDYFGRRKDFKAIHDFLV 155
LVQ L A + L H + +F +T + D GR + F A +V
Sbjct: 84 LVQILLRLR-GASKLALSLLHAARLHPSFVNTQPRSDAYDAVVDALGRARQFDAAWRVVV 142
Query: 156 DNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
D P+T A R V AG Q + F+ ME + D +++ LC+
Sbjct: 143 DASADGAASPRTFAVLARRYVAAGMTRQAIRAFDDMEAFVSREPDAAEFATLLDTLCKYK 202
Query: 214 YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
Y A ++ + P++K+ +LI GWC + D AK+ ++M G E V YN
Sbjct: 203 YPKVATEVFNKRKYKYGPNEKMYSILIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNI 262
Query: 274 ILDCVSKLCRKKDPFRLD---SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+L+ + + +R D AE +L +M G+ +V ++++++ + + E +
Sbjct: 263 LLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHVYSRAHKPELCL 322
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+F M E G P T+ +IK L R+ +G+ ++D M + G Y FL
Sbjct: 323 CMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEY 382
Query: 391 CGIERIEQAMSVFEKMKTDGH--NPDSETYDLLMTKWCAHNR 430
G + + A+ ++ KMK G PD TY++L+ + NR
Sbjct: 383 RGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNR 424
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 15/183 (8%)
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+ K P A +V +Y P N + +++LI CK+ RS+ A K M G
Sbjct: 198 LCKYKYP----KVATEVFNKRKYKYGP-NEKMYSILIYGWCKVNRSDMAKKFLKDMLVHG 252
Query: 341 CHPNETTFLVLIKSLYQAAR----------VGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
PN T+ +L+ + + A V ++++ M+ G Y L
Sbjct: 253 IEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHVY 312
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+ E + +F MK G P TY ++ + R++ L DE V GV P
Sbjct: 313 SRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSP 372
Query: 451 KEY 453
Y
Sbjct: 373 ATY 375
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
N PR+ + ++ ++ L + R+ + A ++ G + TF VL + A +
Sbjct: 113 NTQPRS-DAYDAVVDALGRARQFDAAWRVVVDASADGA-ASPRTFAVLARRYVAAGMTRQ 170
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLT---RLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
D M++ + + D EF T LC + + A VF K K + P+ + Y +
Sbjct: 171 AIRAFDDMEA--FVSREPDAAEFATLLDTLCKYKYPKVATEVFNKRKYK-YGPNEKMYSI 227
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
L+ WC NR D A + + +G+E Y +
Sbjct: 228 LIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNI 262
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 192/442 (43%), Gaps = 33/442 (7%)
Query: 1 MPPSTSLLLGRLLLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPD 60
+P +SL L P + ++P ST SP +L S+ F+ + + +PD
Sbjct: 87 LPHPSSLCL-------PHPQVLAPNSTPSLLGSP-QFLGSFSRGFARALGGDQHSDPEPD 138
Query: 61 QVIARSLSGELLENLEADPLPISQRLHLI---FS------------HVTPTPSLVQSTLN 105
E+ N ADP +S+ +I F+ +V + +LV L
Sbjct: 139 GDNVGGDFDEVNVNSGADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLE 198
Query: 106 FSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGP 163
A + F W Q A F+H T + GR + F+++ L + K +L
Sbjct: 199 RFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTM 258
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + I A + +G FE M+R Y F D++ +++ L A+ L +
Sbjct: 259 ETFSIAIKAFAAAKERKKAVGVFELMKR-YNFDAGVDTINCLLDNLGRAKLGKEAQALFE 317
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ + +L+ GWC L EA R EM GF+ +A++ +L+ + K C+
Sbjct: 318 KLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLK-CK 376
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
KK S+A K+ M+ G NV T+ +LI +LCK + ++A++ F M + GC P
Sbjct: 377 KK------SDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQP 430
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + LI ++ + ++ MK G + Y + + + + A+ ++
Sbjct: 431 DAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIY 490
Query: 404 EKMKTDGHNPDSETYDLLMTKW 425
+KM +G TY+++M +
Sbjct: 491 KKMIQNGIQSTLHTYNMMMKSY 512
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 18/245 (7%)
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M R F+ G NC+LD + + +L EA+ + +E P N+ T+ VL++
Sbjct: 284 MKRYNFDAGVDTINCLLDNLGRA-------KLGKEAQALFEKLEDRFTP-NLRTYTVLLN 335
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C+I+ +A + + M + G P+ +++ L + + + ++ + MK+ G +
Sbjct: 336 GWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSP 395
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ Y + LC ++++A+ F++M G PD+ Y L+T + ++DK AL
Sbjct: 396 NVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALL 455
Query: 439 DEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPK 498
E G + Y A+ K +P+ R +++ Q +
Sbjct: 456 KEMKEKGCPADGRTYN----------ALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTY 505
Query: 499 RMMMR 503
MMM+
Sbjct: 506 NMMMK 510
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 150/337 (44%), Gaps = 11/337 (3%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V + LV L+ A GF W + H ++ D G+ K F +
Sbjct: 159 VRVSARLVSKVLSRFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMCG 218
Query: 153 FLVDNKEVLGPKTLAS---CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ E+ G +LA+ + RL A R + + F +M+R +G +D ++ ++++ L
Sbjct: 219 LIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKMDR-FGVAKDTKAMNVLLDTL 277
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
C+ A + I PD+ + L+ GWC L EA+ +EM R GF
Sbjct: 278 CKERSVKRARGAFQALKGTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVT 337
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
Y C+++ C +KD +D +L +M G N+ T+ +++ L K R+++A
Sbjct: 338 TYTCLIE---AYCMEKDFQTVDG----ILDEMHTKGCTPNIITYTIVMHALGKAGRTQEA 390
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ F ++ + GC + + + LI L +A R+ + + +++ M G + + ++
Sbjct: 391 LDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISA 450
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
C E A+ + +M+ NPD +TY L+ C
Sbjct: 451 ACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCC 487
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 8/203 (3%)
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C + +A +M R G T A N +LD LC+++ R + +
Sbjct: 243 CGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLD---TLCKERSVKRARGAFQAL-----K 294
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+P + +FN L+ CK R ++A + M G P+ TT+ LI++
Sbjct: 295 GTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQT 354
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
D ++D M + G Y + L R ++A+ F+K+K DG D+ Y+ L+
Sbjct: 355 VDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIY 414
Query: 424 KWCAHNRVDKANALFDEAVRNGV 446
C R+ AN + +E R G+
Sbjct: 415 ILCRAGRLQDANFVVEEMHRTGI 437
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S+A M+ GV ++ + NVL+ LCK R + A F + + P+E++F L
Sbjct: 249 SDAIDAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQAL-KGTIPPDESSFNTL 307
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ +A + E E + M+ G++ Y + C + + + ++M T G
Sbjct: 308 VHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGC 367
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ TY ++M R +A FD+ ++G + Y
Sbjct: 368 TPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFY 409
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 160/360 (44%), Gaps = 16/360 (4%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
VT +P LV L AG L F W + F ++ E + G+ K F+ +
Sbjct: 116 VTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWS 175
Query: 153 FL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ + + L T + R RA + + + FE+M +G K D +++ L
Sbjct: 176 LVEAMRCRSCLSKDTFKIIVRRYARARKVKEAVETFEKMS-SFGLKTDLSDYNWLIDILS 234
Query: 211 ENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
++ A + K+ + PD K +L++GW + L K + +EM G +
Sbjct: 235 KSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDV 294
Query: 269 VAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
VAY ++ C S C EA KV +ME +G + + +LI+ L + R
Sbjct: 295 VAYGMLISAFCKSGKC---------DEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERL 345
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++A+K F E G T +I + +A +M+D M+ +G + Y
Sbjct: 346 DEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDII 405
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L L E+IE+A ++F++M+ DG P+ TY +++ +C++ RVD A ++ + GV
Sbjct: 406 LNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGV 465
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 9/211 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P I+ L R + L +F+ + ++ GF + + V+ C +A K+V
Sbjct: 329 PHVYCMLINGLGSMERLDEALKYFQ-LSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMV 387
Query: 223 KDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ + I P+ + D+++ K++EA L + M R G E Y + V
Sbjct: 388 DEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMM---VGMF 444
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C + R+D A KV M+ GV + F+ LI+ LC R E+A F M + G
Sbjct: 445 CSNE---RVDM-ALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGI 500
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
P F L ++L + R+ E+ R++
Sbjct: 501 RPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 160/360 (44%), Gaps = 16/360 (4%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
VT +P LV L AG L F W + F ++ E + G+ K F+ +
Sbjct: 116 VTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWS 175
Query: 153 FL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ + + L T + R RA + + + FE+M +G K D +++ L
Sbjct: 176 LVEAMRCRSCLSKDTFKIIVRRYARARKVKEAVETFEKMS-SFGLKTDLSDYNWLIDILS 234
Query: 211 ENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
++ A + K+ + PD K +L++GW + L K + +EM G +
Sbjct: 235 KSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDV 294
Query: 269 VAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
VAY ++ C S C EA KV +ME +G + + +LI+ L + R
Sbjct: 295 VAYGMLISAFCKSGKC---------DEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERL 345
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++A+K F E G T +I + +A +M+D M+ +G + Y
Sbjct: 346 DEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDII 405
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L L E+IE+A ++F++M+ DG P+ TY +++ +C++ RVD A ++ + GV
Sbjct: 406 LNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGV 465
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 9/211 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P I+ L R + L +F+ + ++ GF + + V+ C +A K+V
Sbjct: 329 PHVYCMLINGLGSMERLDEALKYFQ-LSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMV 387
Query: 223 KDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ + I P+ + D+++ K++EA L + M R G E Y + V
Sbjct: 388 DEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMM---VGMF 444
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C + R+D A KV M+ GV + F+ LI+ LC R E+A F M + G
Sbjct: 445 CSNE---RVDM-ALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGI 500
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
P F L ++L + R+ E+ R++
Sbjct: 501 RPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 164/360 (45%), Gaps = 12/360 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
+ V +P+LV L +G L F W + F ++ E + + G+ K FK I
Sbjct: 105 ASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMI 164
Query: 151 HDFLVD--NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ + D +K +L +T A R RA + + + FE+ME+ +G + +++
Sbjct: 165 WNLVNDMRSKGLLTQETFALISRRYARARKVKEAVETFEKMEK-FGLQPVLSDFNRLLDA 223
Query: 209 LCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC++ + A+++ + F PD K +L++GW + L + REM GFE
Sbjct: 224 LCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPD 283
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V Y + ++ C+ + R D+ E + ME N + LI+ L RR
Sbjct: 284 AVTYGIL---INAHCKAR---RYDAAVE-LFHKMEANKCMPTPHIYCTLINGLGSERRLT 336
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A++ F R G P T+ ++ S Q+ R+ + ++D M+ G + Y L
Sbjct: 337 EALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIIL 396
Query: 388 TRLCGIERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L R ++A VF+ M ++ G P TY++++ +C RVD A ++DE GV
Sbjct: 397 HHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGV 456
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 9/236 (3%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCE-NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVD 246
R +D GF+ D + +++ C+ Y + E K AN+ P I LI G +
Sbjct: 273 REMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSE 332
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
+L EA + GF YN ++ + R D +R+ E K GV
Sbjct: 333 RRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKC-------GV 385
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMG-EWGCHPNETTFLVLIKSLYQAARVGEGD 365
T+++++ +L K RR+++A ++F M E GC P+ +T+ ++++ RV
Sbjct: 386 GPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMAL 445
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ D MK+ G G + + LC ++++A F +M G P + + L
Sbjct: 446 RVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNL 501
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 35/212 (16%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE-------------- 338
EA + ME G+ + FN L+ LCK R E A ++F +M +
Sbjct: 197 EAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILL 256
Query: 339 --W-------------------GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
W G P+ T+ +LI + +A R E+ +M++
Sbjct: 257 EGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCM 316
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + L R+ +A+ FE+ K G P++ TY+ ++ +C R+D A +
Sbjct: 317 PTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRI 376
Query: 438 FDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
DE + GV + + Y + +L K K+
Sbjct: 377 VDEMRKCGVGPQTRTYDIILHHLIKARRTKEA 408
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G + E +N LI L KI++ + L M G ET F ++ + +A +V E
Sbjct: 140 GFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQET-FALISRRYARARKVKEA 198
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E ++M+ G D+ L LC +E+A VF+KMK PD ++Y +L+
Sbjct: 199 VETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEG 258
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
W + + + ++ E G E Y +
Sbjct: 259 WGQEQNLLRLDEVYREMKDEGFEPDAVTYGI 289
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 187/424 (44%), Gaps = 30/424 (7%)
Query: 42 SKPFSSKPTSNPKTIDDPDQVIARSLSGELLE---NLEADPLPISQRLHLI---FS---- 91
S+ FS S +T DP+ ++ G+ E N ADP +S+ +I F+
Sbjct: 164 SRGFSR--VSQGETDSDPETDGDENVGGDFDEVNVNSGADPEEVSRVCRVIDELFALDRN 221
Query: 92 --------HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGR 143
+V + +LV L A + F W Q A F+H T + GR
Sbjct: 222 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 281
Query: 144 RKDFKAIHDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
+ F+++ L + K +L +T + I A + +G FE M+R Y F D+
Sbjct: 282 TRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKR-YNFDAGVDT 340
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+ +++ L A+ L + + P+ + +L+ GWC L EA R EM
Sbjct: 341 INCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMID 400
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
GF+ +A++ +L+ + K C+KK S+A K+ M+ G NV T+ +LI +LC
Sbjct: 401 KGFKPDIIAHHTMLEGLLK-CKKK------SDAIKLFEVMKAKGPSPNVRTYTILIRDLC 453
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K + ++A++ F M + GC P+ + LI ++ + ++ MK G +
Sbjct: 454 KQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGR 513
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + + + + A+ +++KM +G TY+++M + + A+++E
Sbjct: 514 TYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEM 573
Query: 442 VRNG 445
R G
Sbjct: 574 GRKG 577
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 18/245 (7%)
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M R F+ G NC+LD + + +L EA+ + +E P N+ T+ VL++
Sbjct: 329 MKRYNFDAGVDTINCLLDNLGRA-------KLGKEAQALFEKLEDRFTP-NLRTYTVLLN 380
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C+I+ +A + + M + G P+ +++ L + + + ++ + MK+ G +
Sbjct: 381 GWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSP 440
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ Y + LC ++++A+ F++M G PD+ Y L+T + ++DK AL
Sbjct: 441 NVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALL 500
Query: 439 DEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKPK 498
E G + Y A+ K +P+ R +++ Q +
Sbjct: 501 KEMKEKGCPADGRTYN----------ALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTY 550
Query: 499 RMMMR 503
MMM+
Sbjct: 551 NMMMK 555
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 7/180 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + LI G+ K+D+ L +EM G YN ++ ++ ++
Sbjct: 475 PDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNR-------QM 527
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A ++ M NG+ + T+N+++ + R E ++ MG GC P++ +++V
Sbjct: 528 PDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIV 587
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
I L + R E ++ M G + DY +F + + + KMK +G
Sbjct: 588 FIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMKFEG 647
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 169/381 (44%), Gaps = 36/381 (9%)
Query: 75 LEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETL 134
LE+DP + LH + + TP LV L G L F L + +++H+ +
Sbjct: 58 LESDPKSLRGSLHGL--QLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSF 115
Query: 135 SFFTDYFGRRKDFKAIHDFLVDNK-EVLGP--KTLASCIDRLVRAGRPTQVLGFFERMER 191
D GR +D+K + + + +GP KT A +R V AG+P + + F M R
Sbjct: 116 DHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSM-R 174
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLD 250
++G +D S +++ LC++ A L K + D +++ GWC+ +
Sbjct: 175 EHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTP 234
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE----------------- 293
+A + +EM G YN +L + + K+ + +
Sbjct: 235 KALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMV 294
Query: 294 -----------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
A KV +M G+ + T+N +I LCK E+A+ +F M + G
Sbjct: 295 HGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYV 354
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN TT+ V+I+ L+ A + + E I+RMK+ G + Y + C +E+ +S+
Sbjct: 355 PNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSM 414
Query: 403 FEKMKTDGHNPDSETYDLLMT 423
FEKM G P+ +TY++L++
Sbjct: 415 FEKM-GQGSLPNLDTYNVLIS 434
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 24/289 (8%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCE-NGYASYAEKLVKDTANEIFPDDKICDLL 239
+ L FF+ +E + S ++ Y + + + A I P K ++
Sbjct: 94 KALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAII 153
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ + GK D A ++ M G ++N ILD LC+ K +
Sbjct: 154 AERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDI---LCKSKR------------V 198
Query: 300 DMEYNGVPR--------NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+M YN + + +V ++N++ + C I+R+ A+++ M E G P TT+ +L
Sbjct: 199 EMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNIL 258
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+K ++A ++ E E +MK I Y + + I++A VF +M +G
Sbjct: 259 LKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGI 318
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
P + TY+ ++ C + V+ A +F+E V+ G Y V R L
Sbjct: 319 LPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGL 367
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+ A + ++ + + P+ +++I+G G +D+A M G
Sbjct: 328 MIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDG 387
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
E YN + C D + S EK M +P N++T+NVLIS +
Sbjct: 388 CEPNVQTYNV---AIRYFCDAGDVEKGLSMFEK----MGQGSLP-NLDTYNVLISAMFVR 439
Query: 324 RRSEDAI---KLFYRMGEWGCHPNETTF 348
++SED + KL M + G P + TF
Sbjct: 440 KKSEDLVVAGKLLLEMVDRGFIPRKFTF 467
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 140/284 (49%), Gaps = 11/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + R Q L F +M GF D + V+ LC A K +++
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSK-GFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
AN + P+ +LI G C G++DEA L +M + V YN + +S LC+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA-VTYNSL---ISGLCK 127
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ SEA +L +M Y+G ++ T+ LI+ CK ++S+DA+++F ++ G P
Sbjct: 128 AERA----SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI-GKKDYYEFLTRLCGIERIEQAMSV 402
+ T+ LI L + R+ E ++ RM +G + Y ++ C + ++++AM++
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E+M G +PD TY LM +C R+D A L ++ R G+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 9/266 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
ID L + GR + + +M + + ++ LC+ AS A L+++ +
Sbjct: 88 IDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSG 145
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD LI G+C K D+A R+ ++ GF V Y+C++D + K R K+
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L K + +P V T+N LIS C++ + ++A+ L RM E G P+ T+
Sbjct: 206 DLFGRMIK-----SGSCMPNTV-TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + AR+ + +++++M G + + LC R+ A+ + +M+
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKA 434
+P TY+ ++ +C N++++A
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEA 345
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 32/318 (10%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + GR + + F RM + + + ++ C G A L++
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A PD L+ G+C +LD+A L +M R G V + ++D + + R
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 284 KKDPFRLDSEAEK-----------VLLD---------------MEYNGVPRNVETFNVLI 317
D + E + +LD +E P NV +FN++I
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMI 366
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM-KSAGY 376
LCK+ RS +A++L C+P+ + +I L + +V E + +M + G
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y +T LC +++A EK G P+ TY+LL+ + NR + A
Sbjct: 427 LPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARE 482
Query: 437 LFDEAVRNGVEVKPKEYR 454
L D+ V+ G V R
Sbjct: 483 LLDDMVQRGFGVVQSHQR 500
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
N + T+ LI LCK++R E A+ +M G HP+ T+ +I +L R+ E
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ ++ M + Y + LC R+++A+++ KM+ P + TY+ L++
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123
Query: 424 KWCAHNRVDKANALFDEAVRNG 445
C R +A L +E V +G
Sbjct: 124 GLCKAERASEAYDLLEEMVYSG 145
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 140/284 (49%), Gaps = 11/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + R Q L F +M GF D + V+ LC A K +++
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSK-GFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
AN + P+ +LI G C G++DEA L +M + V YN + +S LC+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA-VTYNSL---ISGLCK 127
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ SEA +L +M Y+G ++ T+ LI+ CK ++S+DA+++F ++ G P
Sbjct: 128 AERA----SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI-GKKDYYEFLTRLCGIERIEQAMSV 402
+ T+ LI L + R+ E ++ RM +G + Y ++ C + ++++AM++
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E+M G +PD TY LM +C R+D A L ++ R G+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 9/266 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
ID L + GR + + +M + + ++ LC+ AS A L+++ +
Sbjct: 88 IDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSG 145
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD LI G+C K D+A R+ ++ GF V Y+C++D + K R K+
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L K + +P V T+N LIS C++ + ++A+ L RM E G P+ T+
Sbjct: 206 DLFGRMIK-----SGSCMPNTV-TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + AR+ + +++++M G + + LC R+ A+ + +M+
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKA 434
+P TY+ ++ +C N++++A
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEA 345
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 127/309 (41%), Gaps = 32/309 (10%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + GR + + F RM + + + ++ C G A L++
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A PD L+ G+C +LD+A L +M R G V + ++D + + R
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 284 KKDPFRLDSEAEK-----------VLLD---------------MEYNGVPRNVETFNVLI 317
D + E + +LD +E P NV +FN++I
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMI 366
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM-KSAGY 376
LCK+ RS +A++L C+P+ + +I L + +V E + +M + G
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y +T LC +++A EK G P+ TY+LL+ + NR + A
Sbjct: 427 LPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARE 482
Query: 437 LFDEAVRNG 445
L D+ V+ G
Sbjct: 483 LLDDMVQRG 491
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
N + T+ LI LCK++R E A+ +M G HP+ T+ +I +L R+ E
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ ++ M + Y + LC R+++A+++ KM+ P + TY+ L++
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123
Query: 424 KWCAHNRVDKANALFDEAVRNG 445
C R +A L +E V +G
Sbjct: 124 GLCKAERASEAYDLLEEMVYSG 145
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 159/365 (43%), Gaps = 12/365 (3%)
Query: 86 LHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRK 145
L L S V L + L+ +AG F W ++ + H+ E G+ +
Sbjct: 96 LALQESGVIMRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMR 155
Query: 146 DFKA----IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
F A I + +N +L P+ + R + + + M + YG + D+
Sbjct: 156 QFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPK-YGCEPDEYV 214
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+NG A L +D P+ + L+ GWC +GK+ EAK + ++
Sbjct: 215 FGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKE 274
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
GFE V YN +L ++ + +D F L +E +KV N P N +F +LI + C
Sbjct: 275 AGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKV------NCGP-NAASFTILIQSFC 327
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K + ++A+++F M GC + T+ LI + + E++D M G+ +
Sbjct: 328 KTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQL 387
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + E +E+ M + E+M+ G PD Y+ ++ C + +A L+ E
Sbjct: 388 SYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEM 447
Query: 442 VRNGV 446
G+
Sbjct: 448 QAGGL 452
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 134/322 (41%), Gaps = 34/322 (10%)
Query: 173 LVRAGRPTQVLG-----------FFERMERDYGFKRDKDSLRLVVEKLCE----NGYASY 217
++R+G P +VL FF + G++ + + +++ L + +
Sbjct: 104 IMRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWAL 163
Query: 218 AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
E++ K+ + P+ I +L++ + + +A + EM + G E + C+LD
Sbjct: 164 IEEMRKENPYMLTPEVFI--VLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDA 221
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LC+ EA + DM P N+ F L+ C+ + +A + ++
Sbjct: 222 ---LCKNGSV----KEAASLFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIK 273
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E G P+ + L+ QA ++ + +++ MK + + C E+++
Sbjct: 274 EAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMD 333
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
+AM +F +M+ G D TY L++ +C DKA + D+ ++ G DP
Sbjct: 334 EAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKG---------HDP 384
Query: 458 RYLKKPIAVKKGKKRETLPEKM 479
L + +K+E L E M
Sbjct: 385 SQLSYLCIMMAHEKKEELEECM 406
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 16/314 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L ++G + FE M + G + ++ L +G A A KL ++
Sbjct: 196 TYTSMIDGLGKSGHVDKAFFLFEEMTSE-GLVATRVVYNSLIHGLGRSGRADAAAKLFRE 254
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + PD L+ G V G+ EA+R+ +E G L YN ++D LC+
Sbjct: 255 MLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLID---TLCK 311
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K RLD EA ++ ++E +G+ +V TFN L+ LCK R DA L M GC P
Sbjct: 312 SK---RLD-EAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTP 367
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T + LI L ++ RV E +++ M+S GY Y + C RIE A+ +F
Sbjct: 368 DVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLF 427
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
E++ G ++ TY+ ++ C RVD+A LF NG++ + + +DP ++
Sbjct: 428 EEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLF-----NGMKQETVDGVIDPDFVTYT 481
Query: 464 IAVKKGKKRETLPE 477
+ G ++ L E
Sbjct: 482 TLL-NGARQAGLSE 494
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + + G + L F M + G + + + +++ L ++G+ A L ++
Sbjct: 161 TYSILIDAVCKCGGVEKALKVFLDM-KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEE 219
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+E ++ + LI G G+ D A +L REM G + V + ++ + R
Sbjct: 220 MTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGR 279
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ R+ EA V G +V +NVLI LCK +R ++A ++F + E G P
Sbjct: 280 ASEARRIFQEARDV-------GCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVP 332
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF L+ L ++ R+ + ++ MK AG Y + L R+E+A +
Sbjct: 333 DVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLL 392
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+M++ G+ PD TY+ L+ + C R++ A LF+E G
Sbjct: 393 LEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG 434
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 7/217 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI + G +A + R M + G T +N +++ K R ++L E
Sbjct: 95 LIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEE----- 149
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ NV T+++LI +CK E A+K+F M GC PN T+ +I L ++
Sbjct: 150 --MQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKS 207
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
V + + + M S G + Y + L R + A +F +M + G PD T+
Sbjct: 208 GHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTF 267
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
L+ R +A +F EA G + Y V
Sbjct: 268 TSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNV 304
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 11/303 (3%)
Query: 148 KAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
KA+ + V + L P T ++ +A R V FE M+ + + + ++
Sbjct: 107 KALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ-NQNCSPNVITYSIL 165
Query: 206 VEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ +C+ G A K+ D + P+ +I G G +D+A L EM G
Sbjct: 166 IDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGL 225
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
V YN ++ + + R A K+ +M G+ + TF L+ L
Sbjct: 226 VATRVVYNSLIHGLGRSGRA-------DAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAG 278
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R+ +A ++F + GC + + VLI +L ++ R+ E E+ ++ G +
Sbjct: 279 RASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFN 338
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ LC RI A + MK G PD Y+ L+ RV++A L E
Sbjct: 339 ALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSL 398
Query: 445 GVE 447
G E
Sbjct: 399 GYE 401
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%)
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+L R L ++ + L ME + +N LI K ++ A+ ++ MG+
Sbjct: 59 ELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQS 118
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ TF VL+ + +A RV ++ + M++ + Y + +C +E+A
Sbjct: 119 GLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKA 178
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ VF MK+ G P+ TY ++ VDKA LF+E G+
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGL 225
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 159/365 (43%), Gaps = 12/365 (3%)
Query: 86 LHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRK 145
L L S V L + L+ +AG F W ++ + H+ E G+ +
Sbjct: 119 LALQESGVIMRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMR 178
Query: 146 DFKA----IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
F A I + +N +L P+ + R + + + M + YG + D+
Sbjct: 179 QFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPK-YGCEPDEYV 237
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+NG A L +D P+ + L+ GWC +GK+ EAK + ++
Sbjct: 238 FGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKE 297
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
GFE V YN +L ++ + +D F L +E +KV N P N +F +LI + C
Sbjct: 298 AGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKV------NCGP-NAASFTILIQSFC 350
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K + ++A+++F M GC + T+ LI + + E++D M G+ +
Sbjct: 351 KTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQL 410
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + E +E+ M + E+M+ G PD Y+ ++ C + +A L+ E
Sbjct: 411 SYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEM 470
Query: 442 VRNGV 446
G+
Sbjct: 471 QAGGL 475
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 134/322 (41%), Gaps = 34/322 (10%)
Query: 173 LVRAGRPTQVLG-----------FFERMERDYGFKRDKDSLRLVVEKLCE----NGYASY 217
++R+G P +VL FF + G++ + + +++ L + +
Sbjct: 127 IMRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWAL 186
Query: 218 AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
E++ K+ + P+ I +L++ + + +A + EM + G E + C+LD
Sbjct: 187 IEEMRKENPYMLTPEVFI--VLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLD- 243
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LC+ EA + DM P N+ F L+ C+ + +A + ++
Sbjct: 244 --ALCKNGSV----KEAASLFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIK 296
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E G P+ + L+ QA ++ + +++ MK + + C E+++
Sbjct: 297 EAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMD 356
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
+AM +F +M+ G D TY L++ +C DKA + D+ ++ G DP
Sbjct: 357 EAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKG---------HDP 407
Query: 458 RYLKKPIAVKKGKKRETLPEKM 479
L + +K+E L E M
Sbjct: 408 SQLSYLCIMMAHEKKEELEECM 429
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 154/349 (44%), Gaps = 10/349 (2%)
Query: 99 LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VD 156
LV L A + F W + F+H T +F GR + F+ + L +
Sbjct: 206 LVVDVLQRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMG 265
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
K +L +T + I A + + +G F+ M++ YGFK D + +++ L
Sbjct: 266 EKGLLTMETFSIAIKAFAEAKQRKKAVGIFDLMKK-YGFKVGVDVINFLLDSLSTAKLGK 324
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A+ + + + P + +L+ GWC L EA R+ EM GF VA+N +L+
Sbjct: 325 EAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLE 384
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ K C+KK S+A K+ M+ G NV ++ ++I + CK + +AI+ F M
Sbjct: 385 GLLK-CKKK------SDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVM 437
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ GC P+ + LI + ++ ++ M+ G + Y + +
Sbjct: 438 VDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMP 497
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ A+ +++KM G P TY+++M + + + ++DE + G
Sbjct: 498 DDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKG 546
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 8/220 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLD 250
D GF D + +++E L + S A KL + A P+ + ++I+ +C +
Sbjct: 369 DRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMG 428
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA M G + Y C+ ++ R+K ++D +L +M G P +
Sbjct: 429 EAIEYFDVMVDRGCQPDAALYTCL---ITGFGRQK---KMDM-VYSLLKEMRERGCPPDG 481
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N LI + +DA++++ +M + G P T+ +++KS + G E+ D
Sbjct: 482 RTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDE 541
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
M G Y ++ L +R +A E+M G
Sbjct: 542 MHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKG 581
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 98/222 (44%), Gaps = 13/222 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN---GYASYAEKLVKDTA 226
++ L++ + + + FE M+ G + S ++++ C+ G A ++ D
Sbjct: 383 LEGLLKCKKKSDAIKLFEIMKAK-GPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRG 441
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD + LI G+ K+D L +EM G YN ++ ++
Sbjct: 442 CQ--PDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQ----- 494
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+ +A ++ M +G+ + T+N+++ + + E +++ M + GC P++
Sbjct: 495 --HMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDN 552
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+++V I L + R GE + ++ M G K DY +F +
Sbjct: 553 SYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAPKLDYNKFAS 594
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 13/197 (6%)
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPF--RLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
R GF + YN ++ CV R+ + L+ EK LL ME TF++ I
Sbjct: 231 RPGFAHDSRTYNFMM-CVLGRTRQFETMVAMLEEMGEKGLLTME---------TFSIAIK 280
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
+ ++ + A+ +F M ++G L+ SL A E + +++K +
Sbjct: 281 AFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDR-FTP 339
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ Y L+ C ++ + +A V+ +M G NPD +++++ + A LF
Sbjct: 340 SLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLF 399
Query: 439 DEAVRNGVEVKPKEYRV 455
+ G + Y +
Sbjct: 400 EIMKAKGPSPNVRSYTI 416
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ I+ + GR LG+ ++ D GF+ D+ + V LC+N + +A K++
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E PD ++++ C +G+L+EAK + +M G +N + ++ LC
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL---IAALCT 368
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RL+ EA + + GV +V TFN+LI+ LCK+ A++LF M GC P
Sbjct: 369 GN---RLE-EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ LI +L ++G+ +++ M+S G Y + LC RIE+A VF
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M G + ++ T++ L+ C ++D A L ++ + G++
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQ 528
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 9/305 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ ++ K I + +VD + T + I L R + L R G D +
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL-ARQVTVKGVSPDVYT 393
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC+ G A +L ++ N PD+ + LI C GKL +A L ++M
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G T+ YN I+D LC+K R++ EAE+V M+ G+ RN TFN LI L
Sbjct: 454 STGCPRSTITYNTIID---GLCKK---MRIE-EAEEVFDQMDLQGISRNAITFNTLIDGL 506
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK ++ +DA L +M G PN T+ ++ + + + ++++ M + G+ +
Sbjct: 507 CKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC R + A+ V M+ G P + Y+ ++ N + A +LF E
Sbjct: 567 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626
Query: 441 AVRNG 445
G
Sbjct: 627 MAEVG 631
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G D + +VV LC+NG A+ ++ + PD + LI C +L+EA
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
LAR++ G +N + ++ LC+ DP A ++ +M+ +G + T
Sbjct: 376 LDLARQVTVKGVSPDVYTFNIL---INALCKVGDPHL----ALRLFEEMKNSGCTPDEVT 428
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI NLC + + A+ L M GC + T+ +I L + R+ E +E+ D+M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G + + + LC ++I+ A + +M ++G P++ TY+ ++T +C +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 433 KANALFDEAVRNGVEVKPKEY 453
KA + + NG EV Y
Sbjct: 549 KAADILETMTANGFEVDVVTY 569
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 119/285 (41%), Gaps = 9/285 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
++ L + G+ + G +M D G D + ++ LC A L + T
Sbjct: 328 VNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++LI C G A RL EM G V YN ++D + L +
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL---- 442
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A +L DME G PR+ T+N +I LCK R E+A ++F +M G N TF
Sbjct: 443 ---GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L + ++ + +I++M S G Y LT C I++A + E M
Sbjct: 500 NTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+G D TY L+ C R A + G+ PK Y
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 9/263 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T I+ L + G P L FE M ++ G D+ + +++ LC G A L+KD
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P I + +I G C +++EA+ + +M G + +N ++D + K +
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D F L ++ M G+ N T+N ++++ CK + A + M G
Sbjct: 512 IDDAFGLINQ-------MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L +A R +++ M+ G K Y L L I A+S+F
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 404 EKMKTDGHNPDSETYDLLMTKWC 426
+M G PD+ TY ++ C
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLC 647
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + TV YN +L+ + + + K E V +M G+ +V TFN L+ LC+
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMK-------LLESVYSEMGARGIKPDVVTFNTLMKALCR 193
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ A+ + M G P+ETTF L++ + + + RM G + K
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ C + R+E A+ ++ DG PD TY+ + C ++ V A + D V
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313
Query: 443 RNG 445
+ G
Sbjct: 314 QEG 316
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ + ++L++G K+ + + EM G + V +N ++ LCR
Sbjct: 150 NHLLNVLVEG----SKMKLLESVYSEMGARGIKPDVVTFNTLM---KALCRAHQV----R 198
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A +L +M GV + TF L+ + E A+++ RM E GC + T VLI
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ RV + I + + G+ + Y F+ LC + + A+ V + M +GH+
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY++++ C + ++++A + ++ V G
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 5/217 (2%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P ++ + +I+ G LD K L EM R G ++ + LD D L
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ L ++ + V N NVL+ K++ E ++ MG G P+ TF
Sbjct: 132 ILNQLQPLFGIQADTVVYN-HLLNVLVEG-SKMKLLE---SVYSEMGARGIKPDVVTFNT 186
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+K+L +A +V M++ M S G A + + + IE A+ V +M G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ T ++L+ +C RV+ A + + +G E
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 162/363 (44%), Gaps = 28/363 (7%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V TP+LV L G L F L + ++H + D GR +D+K +
Sbjct: 63 VEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWT 122
Query: 153 FLVDNKEV--LGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
LVD LGP KT A +R V AG+P + + F M ++G +D +S +++
Sbjct: 123 -LVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMH-EHGCVQDLNSFNTILDV 180
Query: 209 LCENGYASYAE-KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC++ A+ KL K +L+KG+ G+L EA +M + E+
Sbjct: 181 LCKSKRVEMADNKLFKVFRGRF-------RILLKGFFRAGQLKEAWEFFLQMKKRKCEID 233
Query: 268 TVAYNCILDC--VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
V Y ++ V+ RK A++V +M GV +V T+N I LCK
Sbjct: 234 VVTYTTVVHGFGVAGEVRK---------AQRVFNEMIGEGVLPSVATYNAFIQVLCKKDN 284
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
E+AI +F M G PN TT+ V+I+ L R+ + E + RMK + Y
Sbjct: 285 VENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNV 344
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD---KANALFDEAV 442
+ C E IE+ ++VFEKM P+ +TY++L++ + D A L E V
Sbjct: 345 VIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMV 404
Query: 443 RNG 445
G
Sbjct: 405 ERG 407
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 14/239 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ K ++ + + GK D A ++ M+ G ++N ILD LC+ K
Sbjct: 134 PNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDV---LCKSKRVEMA 190
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D++ KV + G F +L+ + + ++A + F +M + C + T+
Sbjct: 191 DNKLFKV-----FRG------RFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTT 239
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++ A V + + + M G Y F+ LC + +E A+SVFE+M G
Sbjct: 240 VVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKG 299
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+ P+S TY++++ C R++KA + E + Y V RY ++KG
Sbjct: 300 YMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKG 358
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 140/290 (48%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+S +D L R GR + L FF+ ME G D + ++ L G +
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEME-GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 243
Query: 227 NEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ F PD +LI G C +GK+ EA+++ M+ G E + YN +++ + + + +
Sbjct: 244 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLE 303
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D A K+ + G+ NV ++N+LI+ CK ++ ++A +LF M G P+
Sbjct: 304 D-------ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPST 356
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI +L Q+ RV ++ M++ G + Y L LC +E+A+ +F+
Sbjct: 357 VTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQS 416
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+K H P+ E + +L+ C ++++A FDE +NG+E Y +
Sbjct: 417 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 466
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 13/277 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK---L 221
T S I L RAG +V F M D GF D + ++++ LC+ G A++ L
Sbjct: 218 TYNSLIHGLSRAGLWKEVTWFLNLM-VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 276
Query: 222 VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ E PD + L+ G C+ G+L++A +L + G +L +YN +++ K
Sbjct: 277 MHHKGKE--PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 334
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+ + FRL E M G+ + T+N LI LC+ R A KLF M G
Sbjct: 335 QKIDEAFRLFEE-------MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
+T+ VL+ L + + E ++ +K + + + L +C ++E+A
Sbjct: 388 FLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
F+++ +G PD+ Y++L+ C + +A L
Sbjct: 448 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 9/263 (3%)
Query: 194 GFKRDKDSLRLVVEKL-CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF+ D ++ +V+ + ENG + + T +F D K +LI G C K A
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L +M +G + Y I+D LC+ + +EA + +M G+ +V
Sbjct: 132 IKLHEKM-KGNCKGDVFTYGMIID---SLCKDG----MTTEALDMFSEMIGAGILPDVVV 183
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ L+ LC+ R ++A++ F M G + T+ LI L +A E ++ M
Sbjct: 184 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 243
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G++ + + LC ++ +A + E M G PD TY+ LM C +++
Sbjct: 244 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLE 303
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A LF+ G+++ Y +
Sbjct: 304 DATKLFESLADRGIKLNVFSYNI 326
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 114/238 (47%), Gaps = 11/238 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ +D + + L D L + I+ + + + FE M R G K +
Sbjct: 300 GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEM-RPKGLKPSTVT 358
Query: 202 LRLVVEKLCENGYASYAEKLVKD--TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
++ LC++G A+KL + T + C +L+ G C +G L+EA L + +
Sbjct: 359 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC-VLLDGLCKNGHLEEAIDLFQSI 417
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ + ++ +LD +CR +L+ EA K ++ NG+ + +N+LI+
Sbjct: 418 KKTEHKPNIEVFSILLD---GMCRAG---KLE-EAWKQFDEISKNGLEPDTIAYNILING 470
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LC +A+KL ++M E GC P+ TF V+I++L + + E ++++ M++ ++
Sbjct: 471 LCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFS 528
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 149/344 (43%), Gaps = 11/344 (3%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFK-AIH--DFLVDNKEVLGPKTLASCID 171
L F +W T F + E + D G+ + F A H D + + T + +
Sbjct: 127 LAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVR 186
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
R VRAG + + F RME DYG K DK S +V+ LC+ AS AE ++ P
Sbjct: 187 RYVRAGLAAEAVHAFNRME-DYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEP 245
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + L+ GWC G + +A+ + +M G + Y+ ++D LCR R
Sbjct: 246 DVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVID---SLCRCGQITR-- 300
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A V +M G N TFN L+ K R+E ++++ +M GC + ++ L
Sbjct: 301 --AHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFL 358
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I+S + + E +++D M G A + + + + A ++ KMK
Sbjct: 359 IESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKC 418
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P++ TY++LM + +D L E + VE YR+
Sbjct: 419 MPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRI 462
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 149/321 (46%), Gaps = 11/321 (3%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
I + +V++ L ++ ++ L + GR + L F E GF D+ + +V L
Sbjct: 256 IKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEE---GFCPDQVTFNALVNGL 312
Query: 210 CENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C G+ +++ + F D + LI G C G++DEA + M E T
Sbjct: 313 CRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNT 372
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V YN + + LC K++ +E +VL GV +V TFN LI LC E
Sbjct: 373 VTYNTL---IGTLC-KENHVEAATELARVLTS---KGVLPDVCTFNSLIQGLCLTSNREI 425
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A++LF M E GC P+E T+ +LI+SL R+ E ++ M+ +G A Y +
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLID 485
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
LC R+ A +F++M+ G + S TY+ L+ C RV++A L D+ + G++
Sbjct: 486 GLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKP 545
Query: 449 KPKEYRVDPRYLKKPIAVKKG 469
Y +Y + +K+
Sbjct: 546 DKFTYTTMLKYFCQQGDIKRA 566
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 140/314 (44%), Gaps = 11/314 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKD 200
G K + DF+++ L T S I L + G + + M RD + +
Sbjct: 316 GHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDC--EPNTV 373
Query: 201 SLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++ LC+ + A +L + T+ + PD + LI+G C+ + A L EM
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G + Y+ +++ LC ++ RL EA +L +ME +G RNV +N LI
Sbjct: 434 KEKGCDPDEFTYSILIE---SLCSER---RL-KEALMLLKEMELSGCARNVVVYNTLIDG 486
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LCK R DA +F +M G + T+ LI L ++ RV E +++D+M G
Sbjct: 487 LCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD 546
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
K Y L C I++A + + M +G PD TY L+ C RVD A+ L
Sbjct: 547 KFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLR 606
Query: 440 EAVRNGVEVKPKEY 453
G+ + P+ Y
Sbjct: 607 SVQMKGMVLTPQAY 620
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 8/259 (3%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD 246
R+ G D + +++ LC A +L ++ + PD+ +LI+ C +
Sbjct: 396 RVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSE 455
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
+L EA L +EM G V YN ++D + K R D AE + ME GV
Sbjct: 456 RRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGD-------AEDIFDQMEMLGV 508
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
R+ T+N LI+ LCK +R E+A +L +M G P++ T+ ++K Q + +
Sbjct: 509 SRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAAD 568
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ M G Y + LC R++ A + ++ G + Y+ ++ C
Sbjct: 569 IVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALC 628
Query: 427 AHNRVDKANALFDEAVRNG 445
R +A LF E + G
Sbjct: 629 KRKRTKEAMRLFREMMEKG 647
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + VP +V TFN+LI LCK + AI + M +G P+E TF L++ + A
Sbjct: 190 MVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEAD 249
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS-VFEKMKTDGHNPDSETYD 419
V + + M +G + + LC RIE+A+ ++E+ +G PD T++
Sbjct: 250 VEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEE---EGFCPDQVTFN 306
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
L+ C + + + D + G E+ Y
Sbjct: 307 ALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTY 340
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 7/197 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L++ G D L R+M+ + + L+ + L +E +
Sbjct: 98 LLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYAT------SHHLHAEINPLF 151
Query: 299 LDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L ME + V + +NV +S L K + + L +M P+ +TF +LI++L +
Sbjct: 152 LLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCK 211
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
A ++ M++ M + G +K + + +E A+ + E M G S +
Sbjct: 212 AHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVS 271
Query: 418 YDLLMTKWCAHNRVDKA 434
++L+ C R+++A
Sbjct: 272 VNVLVNGLCKEGRIEEA 288
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+S +D L R GR + L FF+ ME G D + ++ L G +
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEME-GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182
Query: 227 NEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ F PD +LI G C +GK+ EA+++ M G E + YN +++ + + + +
Sbjct: 1183 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE 1242
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D A K+ + G+ NV ++N+LI+ CK ++ ++A + F M G P+
Sbjct: 1243 D-------ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPST 1295
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI +L Q+ RV ++ M++ G + Y L LC +E+AM +F+
Sbjct: 1296 VTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQS 1355
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+K H P+ E + +L+ C ++++A FDE +NG+E Y +
Sbjct: 1356 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 1405
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 13/284 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK---L 221
T S I L RAG +V F M D GF D + ++++ LC+ G A++ L
Sbjct: 1157 TYNSLIHGLSRAGLWKEVTWFLNLM-VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 1215
Query: 222 VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
++ E PD + L+ G C+ G+L++A +L + G +L +YN +++ K
Sbjct: 1216 MRHKGKE--PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 1273
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+ + FR E M G+ + T+N LI LC+ R A KLF M G
Sbjct: 1274 QKIDEAFRFFEE-------MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 1326
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
+T+ VL+ L + + E ++ +K + + + L +C ++E+A
Sbjct: 1327 FLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 1386
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
F+++ +G PD+ Y++L+ C + +A L + G
Sbjct: 1387 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 10/304 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K+ + +VD T ID L + G+ + E M R G + D +
Sbjct: 1169 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM-RHKGKEPDILT 1227
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ LC G A KL + A+ + ++LI G+C D K+DEA R EM
Sbjct: 1228 YNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR 1287
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G + TV YN ++ + + R + A+K+ ++M+ G + T+ VL+ L
Sbjct: 1288 PKGLKPSTVTYNTLIGALCQSGRVR-------TAQKLFVEMQTCGQFLKLSTYCVLLDGL 1340
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK E+A+ LF + + PN F +L+ + +A ++ E + D + G
Sbjct: 1341 CKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDT 1400
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC + +A+ + +M+ G PDS T+++++ N + +A L +E
Sbjct: 1401 IAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEE 1460
Query: 441 AVRN 444
+RN
Sbjct: 1461 -MRN 1463
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 116/263 (44%), Gaps = 9/263 (3%)
Query: 194 GFKRDKDSLRLVVEKL-CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF+ D ++ +V+ + ENG + + T + D K +LI G C K A
Sbjct: 1011 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLA 1070
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L +M +G + Y I+D LC+ + +EA + +M G+ +V
Sbjct: 1071 IKLHEKM-KGNCKGDVFTYGMIIDA---LCKDG----MTTEALDMFSEMIGAGILPDVVV 1122
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ L+ LC+ R ++A++ F M G + T+ LI L +A E ++ M
Sbjct: 1123 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G++ + + LC ++ +A + E M+ G PD TY+ LM C +++
Sbjct: 1183 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE 1242
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A LF+ G+++ Y +
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNI 1265
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 11/238 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ +D + + L D L + I+ + + + FFE M R G K +
Sbjct: 1239 GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEM-RPKGLKPSTVT 1297
Query: 202 LRLVVEKLCENGYASYAEKLVKD--TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
++ LC++G A+KL + T + C +L+ G C +G L+EA L + +
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC-VLLDGLCKNGHLEEAMDLFQSI 1356
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ + ++ +LD +CR +L+ EA K ++ NG+ + +N+LI+
Sbjct: 1357 KKTEHKPNIEVFSILLD---GMCRAG---KLE-EAWKQFDEISKNGLEPDTIAYNILING 1409
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LC +A+KL ++M E GC P+ TF V+I++L + + E ++++ M++ ++
Sbjct: 1410 LCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFS 1467
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 8/179 (4%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
T +N +L V+KL F + + V G+ ++ T N+LI C +R
Sbjct: 946 TDTFNHLLASVAKLGYYSTVFPMYRKINDV-------GIQPDLYTLNILIHCCCSLRAVG 998
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+F + G P+ T L+K ++ + + ++ D M G K Y +
Sbjct: 999 CGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILI 1058
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC + A+ + EKMK + D TY +++ C +A +F E + G+
Sbjct: 1059 NGLCKARKTGLAIKLHEKMKGNCKG-DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGI 1116
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 165/399 (41%), Gaps = 58/399 (14%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE-----VLGPKTL 166
+ L F W + H T D GR K + + + E V+ +
Sbjct: 127 QVALLFFTWAAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTNRMF 186
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A ++R A + + + F + DYGF+ D ++++ LC + AE L
Sbjct: 187 AVLLNRYAGAHKVQEAIEIFYK-RNDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKK 245
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLARE---------------------------- 258
+E P K ++++ GWCV G L +AKR+ E
Sbjct: 246 DEFPPVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTFINALTKAGKLST 305
Query: 259 -------MYRGGFELGTVAYNCILDCVSKLC-RKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
M+ G NCI+D +LC +KK P EA K+ +M G +V
Sbjct: 306 AVKLFTSMWEKGINPDVAICNCIID---QLCFKKKIP-----EALKIFGEMNDRGCQADV 357
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N LI + CKIRR+E +L M + GC PN T+ ++K+ + V +I R
Sbjct: 358 ATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPRDVM---NLIQR 414
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ +G + Y L ++ + V+E+M+ +G PD ++ +++ + +
Sbjct: 415 MEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMVHGLHSQGQ 474
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+D+A + G+ +P+ R L K I +KKG
Sbjct: 475 LDQALQYYTTMKSRGMTPEPRT-----RILVKAIHIKKG 508
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ I+ + GR LG+ ++ D GF+ D+ + V LC+N + +A K++
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E PD ++++ C +G+L+EAK + +M G +N + ++ LC
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL---IAALCT 368
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RL+ EA + + GV +V TFN+LI+ LCK+ A++LF M GC P
Sbjct: 369 GN---RLE-EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ LI +L ++G+ +++ M+S G Y + LC RIE+A VF
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M G + ++ T++ L+ C ++D A L ++ + G++
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 528
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 9/305 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ ++ K I + +VD + T + I L R + L R G D +
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL-ARQVTVKGVSPDVYT 393
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC+ G A +L ++ N PD+ + LI C GKL +A L ++M
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G T+ YN I+D LC+K R++ EAE+V M+ G+ RN TFN LI L
Sbjct: 454 STGCPRSTITYNTIID---GLCKK---MRIE-EAEEVFDQMDLQGISRNAITFNTLIDGL 506
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK ++ +DA +L +M G PN T+ ++ + + + ++++ M + G+ +
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC R + A+ V M+ G P + Y+ ++ N + A +LF E
Sbjct: 567 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626
Query: 441 AVRNG 445
G
Sbjct: 627 MAEVG 631
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 120/285 (42%), Gaps = 9/285 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
++ L + G+ + G +M D G D + ++ LC A L + T
Sbjct: 328 VNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++LI C G A RL EM G V YN ++D + L +
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL---- 442
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A +L DME G PR+ T+N +I LCK R E+A ++F +M G N TF
Sbjct: 443 ---GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L + ++ + E+I++M S G Y LT C I++A + E M
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+G D TY L+ C R A + G+ PK Y
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 9/263 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T I+ L + G P L FE M ++ G D+ + +++ LC G A L+KD
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P I + +I G C +++EA+ + +M G + +N ++D + K +
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D F L ++ M G+ N T+N ++++ CK + A + M G
Sbjct: 512 IDDAFELINQ-------MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L +A R +++ M+ G K Y L L I A+S+F
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 404 EKMKTDGHNPDSETYDLLMTKWC 426
+M G PD+ TY ++ C
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLC 647
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + TV YN +L+ + + + K E V +M G+ +V TFN L+ LC+
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMK-------LLESVYSEMGARGIKPDVVTFNTLMKALCR 193
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ A+ + M G P+ETTF L++ + + + RM G + K
Sbjct: 194 AHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ C + R+E A+ ++ DG PD TY+ + C ++ V A + D V
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313
Query: 443 RNG 445
+ G
Sbjct: 314 QEG 316
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ + ++L++G K+ + + EM G + V +N ++ LCR
Sbjct: 150 NHLLNVLVEG----SKMKLLESVYSEMGARGIKPDVVTFNTLM---KALCRAHQV----R 198
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A +L +M GV + TF L+ + E A+++ RM E GC + T VLI
Sbjct: 199 TAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ RV + I + + G+ + Y F+ LC + + A+ V + M +GH+
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY++++ C + ++++A + ++ V G
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 5/221 (2%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
++ P ++ + +I+ G LD K L EM R G ++ + LD D
Sbjct: 68 DDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDD 127
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
L + L ++ + V N NVL+ K++ E ++ MG G P+
Sbjct: 128 AVDLILNQLQPLFGIQADTVVYN-HLLNVLVEG-SKMKLLE---SVYSEMGARGIKPDVV 182
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
TF L+K+L +A +V M++ M S G A + + + IE A+ V +M
Sbjct: 183 TFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G + T ++L+ +C RV+ A + + +G E
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ I+ + GR LG+ ++ D GF+ D+ + V LC+N + +A K++
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E PD ++++ C +G+L+EAK + +M G +N + ++ LC
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL---IAALCT 368
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RL+ EA + + GV +V TFN+LI+ LCK+ A++LF M GC P
Sbjct: 369 GN---RLE-EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ LI +L ++G+ +++ M+S G Y + LC RIE+A VF
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M G + ++ T++ L+ C ++D A L ++ + G++
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 528
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 9/305 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ ++ K I + +VD + T + I L R + L R G D +
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL-ARQVTVKGVSPDVYT 393
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC+ G A +L ++ N PD+ + LI C GKL +A L ++M
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G T+ YN I+D LC+K R++ EAE+V M+ G+ RN TFN LI L
Sbjct: 454 STGCPRSTITYNTIID---GLCKK---MRIE-EAEEVFDQMDLQGISRNAITFNTLIDGL 506
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK ++ +DA +L +M G PN T+ ++ + + + ++++ M + G+ +
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC R + A+ V M+ G P + Y+ ++ N + A +LF E
Sbjct: 567 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626
Query: 441 AVRNG 445
G
Sbjct: 627 MAEVG 631
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 120/285 (42%), Gaps = 9/285 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
++ L + G+ + G +M D G D + ++ LC A L + T
Sbjct: 328 VNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++LI C G A RL EM G V YN ++D + L +
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL---- 442
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A +L DME G PR+ T+N +I LCK R E+A ++F +M G N TF
Sbjct: 443 ---GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L + ++ + E+I++M S G Y LT C I++A + E M
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+G D TY L+ C R A + G+ PK Y
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 9/263 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T I+ L + G P L FE M ++ G D+ + +++ LC G A L+KD
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P I + +I G C +++EA+ + +M G + +N ++D + K +
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D F L ++ M G+ N T+N ++++ CK + A + M G
Sbjct: 512 IDDAFELINQ-------MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L +A R +++ M+ G K Y L L I A+S+F
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 404 EKMKTDGHNPDSETYDLLMTKWC 426
+M G PD+ TY ++ C
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLC 647
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + TV YN +L+ + + + K E V +M G+ +V TFN L+ LC+
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMK-------LLESVYSEMGARGIKPDVVTFNTLMKALCR 193
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ A+ + M G P+ETTF L++ + + + RM G + K
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ C + R+E A+ ++ DG PD TY+ + C ++ V A + D V
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313
Query: 443 RNG 445
+ G
Sbjct: 314 QEG 316
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ + ++L++G K+ + + EM G + V +N ++ LCR
Sbjct: 150 NHLLNVLVEG----SKMKLLESVYSEMGARGIKPDVVTFNTLM---KALCRAHQV----R 198
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A +L +M GV + TF L+ + E A+++ RM E GC + T VLI
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ RV + I + + G+ + Y F+ LC + + A+ V + M +GH+
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY++++ C + ++++A + ++ V G
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 5/217 (2%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P ++ + +I+ G LD K L EM R G ++ + LD D L
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ L ++ + V N NVL+ K++ E ++ MG G P+ TF
Sbjct: 132 ILNQLQPLFGIQADTVVYN-HLLNVLVEG-SKMKLLE---SVYSEMGARGIKPDVVTFNT 186
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+K+L +A +V M++ M S G A + + + IE A+ V +M G
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ T ++L+ +C RV+ A + + +G E
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 10/291 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T I RL+ A Q + F +E K D +++ LC+ GY +A +L
Sbjct: 130 PTTFFILIKRLISANLTRQAVRAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELF 189
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+N D K+ +LI GWC G+ A EM G E V YN IL+ +C
Sbjct: 190 NRNSNRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILN---GIC 246
Query: 283 RKKDPF------RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
RK R +AEKV +M +G+ +V +F++++ + + + + M
Sbjct: 247 RKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLM 306
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
E G PN T+ +IK L R+ E +++ID M G + Y F G +
Sbjct: 307 KEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDA 366
Query: 397 EQAMSVFEKMKTDG-HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++A+ F+KMK DG P + TY +L+ + + + ++++ + +GV
Sbjct: 367 DKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGV 417
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL---------DCVSKLCRKKDPFR 289
+IK C G+++EA+ L EM R G YNC D K +K
Sbjct: 321 VIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDG 380
Query: 290 L---DSEAEKVLL-----------------DMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
L + VL+ DM +GV +++++ VLI LC+ ++ +A
Sbjct: 381 LCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREA 440
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ F M E G P + TF L + L Q+
Sbjct: 441 CQYFVEMIEKGFLPQKVTFETLYRGLIQS 469
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 155/360 (43%), Gaps = 12/360 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA- 149
S V P L++ LN +AG F W + + H+ E + + F A
Sbjct: 108 SGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAV 167
Query: 150 ---IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
I + +N +++ P+ + R A + + + M +G + D+ ++
Sbjct: 168 WGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMP-TFGLEPDEYVFGCLL 226
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ LC++G A KL +D + + L+ GWC + K+ EAK + +M GFE
Sbjct: 227 DALCKHGSVKDAAKLFEDMRLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEP 286
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V Y +L + + D + L L DM G N + VLI LCK+ R
Sbjct: 287 DIVDYTNLLSGYANAGKMADAYDL-------LKDMRRRGFEPNATCYTVLIQALCKVDRM 339
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+A+K+F M + C + T+ L+ + ++ + ++D M G + Y
Sbjct: 340 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHI 399
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ E++ + + + EKMK ++PD Y++++ C V +A L++E NG+
Sbjct: 400 MAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGL 459
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A +VL +M G+ + F L+ LCK +DA KLF M N F L+
Sbjct: 202 KAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RLRFPVNLRYFTSLL 260
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ ++ E ++ +MK AG+ DY L+ ++ A + + M+ G
Sbjct: 261 YGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFE 320
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYLK 461
P++ Y +L+ C +R+++A +F E R E Y ++D YL
Sbjct: 321 PNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLV 380
Query: 462 KPIAVKKG 469
+KKG
Sbjct: 381 LDDMIKKG 388
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 148/344 (43%), Gaps = 12/344 (3%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDF--LVDNKEVLGP-KTLASCID 171
L F +W T F H+ E D G+ + F L+ + V P +T +
Sbjct: 130 LAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVR 189
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
R V+AG + + F RME DYG K DK + +V+ L + A A+ + P
Sbjct: 190 RYVKAGLAAEAVHAFNRME-DYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEP 248
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + L+ GWC G + EA+R+ EM G + Y+ ++D LCR R
Sbjct: 249 DVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDA---LCRSGQITR-- 303
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A V +M G N TFN L+ K R+E ++++ +M GC P+ T+ L
Sbjct: 304 --AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFL 361
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I+S + + E ++++ +K G + + + + + A +F KMK
Sbjct: 362 IESHCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKC 420
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P++ TY++LM + D L E N +E YRV
Sbjct: 421 RPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRV 464
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L R+G+ T+ F M D G + + ++ + G ++
Sbjct: 287 TYSIVIDALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQ 345
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D I + LI+ C D L+EA ++ + + G L ++N I C+SKL
Sbjct: 346 MKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGD 404
Query: 284 KKDPFRL------------------------DSEAEKVLL----DMEYNGVPRNVETFNV 315
R+ D ++ ++L +M+ N + N T+ V
Sbjct: 405 VNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRV 464
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGC-HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LIS C I +A F M E C P+ + ++++ L +A ++ + +E++++M +
Sbjct: 465 LISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNR 524
Query: 375 GYA 377
G+
Sbjct: 525 GFV 527
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 166/385 (43%), Gaps = 42/385 (10%)
Query: 75 LEADPLPISQRLHLIFSHVTPTPSLVQSTL----NFSPEAGRAILGFNHWLTQNANFSHT 130
LE+DP +S+ L + TP LV TL N P +A+L F H +++H+
Sbjct: 46 LESDPRTLSEAL--TKPRIHWTPELVNKTLKRLWNHGP---KALLFFKHLDRHLPSYTHS 100
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGP--KTLASCIDRLVRAGRPTQVLGFFE 187
+ D R +DF + + + + LGP KTLA +R G+P + + F
Sbjct: 101 PSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFL 160
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDG 247
M ++G +D S +++ LC++ A L++ + PD ++L G+C+
Sbjct: 161 SMH-EHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKK 219
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE-------------- 293
+ A R+ +EM + G E V YN +L + + K+ + E
Sbjct: 220 RTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYT 279
Query: 294 --------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
A++V +M GV NV T+N LI CK ++A+ +F M
Sbjct: 280 TVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVRE 339
Query: 340 G-CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G C PN TF V+I+ L + ++RM G + Y + C IE+
Sbjct: 340 GVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEK 399
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMT 423
+ VF KM P+ +TY++L++
Sbjct: 400 GLEVFGKMGDGLCLPNLDTYNVLIS 424
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P K +L + + GK A R M+ G ++N +LD LC+ R+
Sbjct: 134 PSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDI---LCKSN---RV 187
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
++ A +L ++ P V ++N+L + C +R+ A+++ M + G P T+
Sbjct: 188 ET-AHDLLRTLKSRFRPDTV-SYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNT 245
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++K +++ ++ E E MK I Y + +++A VF++M +G
Sbjct: 246 MLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEG 305
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P+ TY+ L+ +C + V A A+F+E VR GV
Sbjct: 306 VAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGV 341
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 159/366 (43%), Gaps = 11/366 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S + T LV L G W ++ HT E + D G+ K F +
Sbjct: 82 SGIDATNELVSQILMRFDSHCVVAFGVFIWAKNQTSYVHTPELYDYMIDILGKFKKFSLM 141
Query: 151 HDFLVDNKEVLGPKTLASC---IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
+ K + G +LA+ + RL +A + + F +E+ YG +D+++L ++++
Sbjct: 142 WSLVEQMKGLNGYVSLATASKVMRRLAKARKYKDAIDVFRGIEK-YGASKDREALNVLMD 200
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
L + G A + + I D ++LI G+C A+++ EM + GF
Sbjct: 201 ALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPD 260
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V+Y+C ++ C +KD FR E V +M+ G NV T+ ++ L K R+
Sbjct: 261 VVSYSCF---IAAYCEQKD-FR---NVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLN 313
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A++++ +M GC P+ + LI L Q+ R+ + ++ + M+ G Y +
Sbjct: 314 EALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMI 373
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ C + A+ + E+M+ D PD +TY L+ C + L +N V
Sbjct: 374 SSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVS 433
Query: 448 VKPKEY 453
V Y
Sbjct: 434 VDLGTY 439
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 141/287 (49%), Gaps = 14/287 (4%)
Query: 166 LASCIDRLVRAGRPTQVL-GFFERMERDYGFKRDKDSLRLVVEKL---CENGYASYAEKL 221
LA+C+ L R + G R G+ D + +++ L C+ G+ A+++
Sbjct: 131 LANCLCNLNRVSEGLAAMTGILRR-----GYIPDIVTYNTLIKGLYGLCKVGHEDEAKEI 185
Query: 222 VKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
++ A + P+ L+ G+C GKL+E+KRL EM G + V +N ++D + K
Sbjct: 186 FEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCK 245
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ D S A K+ L M G N ++ +LI+ CKI + E+A+ L+ M + G
Sbjct: 246 EGKIGDL----SSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVG 301
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ L+ L Q +VG+ +++ MK++G ++ Y FL LC + +AM
Sbjct: 302 KRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAM 361
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+F ++K+ D E+Y L+ C +V+ A F + + G++
Sbjct: 362 ELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQ 408
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 7/278 (2%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLI 240
Q FF+ M R + RL+ N Y+ K + PD ++L
Sbjct: 73 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILA 132
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
C ++ E + R G+ V YN ++ + LC+ + EA+++ +
Sbjct: 133 NCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGH----EDEAKEIFEE 188
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ G+ NV +++ L+ C + E++ +LF M + G PN F VLI L + +
Sbjct: 189 MKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGK 248
Query: 361 VGE---GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+G+ ++ M S G + Y + C I ++E+AM+++ +M G P+ +T
Sbjct: 249 IGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKT 308
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y L+T +V AN LF +G+ V Y +
Sbjct: 309 YSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVI 346
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 39/213 (18%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ K L+ G GK+ +A +L M G + + Y LD LC+ F
Sbjct: 304 PNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLD---GLCKNGVLF-- 358
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA ++ +++ + E+++ LI LCK + E A + F ++ + G PN T +
Sbjct: 359 --EAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNI 416
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I + +V + + + ++M EKM+ +G
Sbjct: 417 MIHGFCRVEQVDKANILFEKM--------------------------------EKMEENG 444
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
PD TY+ L+ +C N++++ L + +
Sbjct: 445 CTPDIITYNTLLRGFCESNKLEEVVNLLHKMFK 477
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ I+ + GR LG+ ++ D GF+ D+ + V LC+N + +A K++
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDV 219
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E PD ++++ C +G+L+EAK + +M G +N + ++ LC
Sbjct: 220 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL---IAALCT 276
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RL+ EA + + GV +V TFN+LI+ LCK+ A++LF M GC P
Sbjct: 277 GN---RLE-EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ LI +L ++G+ +++ M+S G Y + LC RIE+A VF
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 392
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M G + ++ T++ L+ C ++D A L ++ + G++
Sbjct: 393 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 436
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 9/305 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ ++ K I + +VD + T + I L R + L R G D +
Sbjct: 243 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL-ARQVTVKGVSPDVYT 301
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC+ G A +L ++ N PD+ + LI C GKL +A L ++M
Sbjct: 302 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 361
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G T+ YN I+D LC+K R++ EAE+V M+ G+ RN TFN LI L
Sbjct: 362 STGCPRSTITYNTIID---GLCKK---MRIE-EAEEVFDQMDLQGISRNAITFNTLIDGL 414
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK ++ +DA +L +M G PN T+ ++ + + + ++++ M + G+ +
Sbjct: 415 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 474
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC R + A+ V M+ G P + Y+ ++ N + A +LF E
Sbjct: 475 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 534
Query: 441 AVRNG 445
G
Sbjct: 535 MAEVG 539
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 120/285 (42%), Gaps = 9/285 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
++ L + G+ + G +M D G D + ++ LC A L + T
Sbjct: 236 VNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++LI C G A RL EM G V YN ++D + L +
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL---- 350
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A +L DME G PR+ T+N +I LCK R E+A ++F +M G N TF
Sbjct: 351 ---GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L + ++ + E+I++M S G Y LT C I++A + E M
Sbjct: 408 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 467
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+G D TY L+ C R A + G+ PK Y
Sbjct: 468 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 512
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 9/258 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ L + G P L FE M ++ G D+ + +++ LC G A L+KD +
Sbjct: 306 INALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P I + +I G C +++EA+ + +M G + +N ++D + K + D F
Sbjct: 365 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 424
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L ++ M G+ N T+N ++++ CK + A + M G + T+
Sbjct: 425 ELINQ-------MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTY 477
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L +A R +++ M+ G K Y L L I A+S+F +M
Sbjct: 478 GTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 537
Query: 409 DGHNPDSETYDLLMTKWC 426
G PD+ TY ++ C
Sbjct: 538 VGEPPDALTYKIVFRGLC 555
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + TV YN +L+ + + + K E V +M G+ +V TFN L+ LC+
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMK-------LLESVYSEMGARGIKPDVVTFNTLMKALCR 101
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ A+ + M G P+ETTF L++ + + + RM G + K
Sbjct: 102 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 161
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ C + R+E A+ ++ DG PD TY+ + C ++ V A + D V
Sbjct: 162 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221
Query: 443 RNG 445
+ G
Sbjct: 222 QEG 224
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ + ++L++G K+ + + EM G + V +N ++ LCR
Sbjct: 58 NHLLNVLVEG----SKMKLLESVYSEMGARGIKPDVVTFNTLM---KALCRAHQV----R 106
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A +L +M GV + TF L+ + E A+++ RM E GC + T VLI
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ RV + I + + G+ + Y F+ LC + + A+ V + M +GH+
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY++++ C + ++++A + ++ V G
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ + +N L++ L + + + ++ MG G P+ TF L+K+L +A +V
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
M++ M S G A + + + IE A+ V +M G + T ++L+
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168
Query: 425 WCAHNRVDKANALFDEAVRNGVE 447
+C RV+ A + + +G E
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFE 191
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 8/281 (2%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L + I+ V +G+ + F ++GF+ D + +++ LC+ G S+A LV +
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416
Query: 226 ANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ P+ +L+ G C G L+EA + EM G + +V YNC+ + LCRK
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL---ICALCRK 473
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ A +L +M G ++ T+N LI LCK+ R ++A +LF+ M G N
Sbjct: 474 EKV----HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ LI +L + + +++ M G + K Y + C + IE+ + ++E
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+M DG D+ + ++++ C +VD A +A+ G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 16/334 (4%)
Query: 127 FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVL 183
+ HT + F + G FK I L+ KE V + +AG+P Q +
Sbjct: 108 YCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAI 167
Query: 184 GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKG 242
M Y + S LV+E L A + D ++ + P +++K
Sbjct: 168 RLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKA 227
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
C+ ++D A L R+M + G ++ Y ++ +S+ K+ SEA K+L +M
Sbjct: 228 LCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQ----KNQV---SEALKLLEEMF 280
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G +V+TFN +I LCK+ + DA KL RM G +P+ T+ L+ L + ++
Sbjct: 281 VMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLN 340
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF-EKMKTDGHNPDSETYDLL 421
E +++ ++ AI ++ ++++A S E M G PD TY++L
Sbjct: 341 EARKILIKIPCPNNAILNTLINGYVMS----GQLKEAQSFLNETMINFGFQPDIFTYNIL 396
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M C + A L +E R G E Y +
Sbjct: 397 MHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAI 430
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 19/284 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
I L + + ++ L E M G D + V+ LC+ A KLV +
Sbjct: 260 IHALSQKNQVSEALKLLEEMFV-MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG 318
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+PD+ L+ G C GKL+EA+++ ++ N IL+ +
Sbjct: 319 FYPDNMTYGFLLHGLCRIGKLNEARKILIKI--------PCPNNAILNTLINGYVMSGQL 370
Query: 289 RLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ EA+ L + N G ++ T+N+L+ LCK A L M GC PN T
Sbjct: 371 K---EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +L+ L +A + E ++ M + G I Y + LC E++ A+++ +M
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKA-----NALFDEAVRNGV 446
T G PD TY+ L+ C +R+D+A N L D AV N V
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 7/216 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++L+ G C +G L A+ L EM R G E + Y + V+ LC+ L
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL---VNGLCKAG----L 440
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA VL +M G+ N +N LI LC+ + A+ L M GC P+ T+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI L + R+ E + M G Y + L ++A+++ M G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
D TY+ L+ +C ++K L+++ + +G+
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICD 237
PT +L FER+ G+ D + + KL G +KL+ E I + I
Sbjct: 93 PT-LLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFM 151
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGF--ELGTVAYNCILDC-VSKLCRKKDPFRLDSEA 294
+++K + G+ +A RL +M R + E +Y+ +L+ V+ C + A
Sbjct: 152 IIMKHYGKAGQPGQAIRLLLDM-RAVYLCEPTFKSYDLVLEILVTGNCPQV--------A 202
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
V DM GV V TF +++ LC + A L M + GC PN + LI +
Sbjct: 203 TNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHA 262
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L Q +V E ++++ M G + + + + LC + +I A + ++M G PD
Sbjct: 263 LSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPD 322
Query: 415 SETYDLLMTKWCAHNRVDKA 434
+ TY L+ C ++++A
Sbjct: 323 NMTYGFLLHGLCRIGKLNEA 342
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 10/215 (4%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F+ H+ L+D V T + I L+R G + L M G DK + ++
Sbjct: 515 FRLFHNMLLDGA-VANNVTYNTLIHALLRRGAFQKALTLVNDMLFR-GCTLDKITYNGLI 572
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ C+ G +L + + D I C+++I G C GK+D A R+ GF
Sbjct: 573 KAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFV 632
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
V YN +L+ + K+ R K+ L ++ GV + T+N IS CK
Sbjct: 633 PDIVTYNSVLNGLCKVGRIKEALNLFDR-------LQVEGVRPDAFTYNTFISWQCKEGM 685
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
DA FYR E G P+ T+ VL+ +L + +
Sbjct: 686 VNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G +A L +M G L + YN ++ K+ + L E++++D G+
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL---YEQMIMD----GL 596
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+ + N++I+ LCK+ + ++A + G P+ T+ ++ L + R+ E
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ DR++ G Y F++ C + A S F + +G P + T+++L+
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLV 712
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 8/281 (2%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L + I+ V +G+ + F ++GF+ D + +++ LC+ G S+A LV +
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416
Query: 226 ANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ P+ +L+ G C G L+EA + EM G + +V YNC+ + LCRK
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL---ICALCRK 473
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ A +L +M G ++ T+N LI LCK+ R ++A +LF+ M G N
Sbjct: 474 EKV----HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ LI +L + + +++ M G + K Y + C + IE+ + ++E
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+M DG D+ + ++++ C +VD A +A+ G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 154/370 (41%), Gaps = 17/370 (4%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
SH+ TP + L + + F Q + HT + F + G FK I
Sbjct: 73 SHILITPVQLCKLLELPLDVPTLLEIFERVGGQKG-YCHTFDVYYVFINKLGAIGKFKLI 131
Query: 151 HDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
L+ KE V + +AG+P Q + M Y + S LV+E
Sbjct: 132 DKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLE 191
Query: 208 KLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
L A + D ++ + P +++K C+ ++D A L R+M + G
Sbjct: 192 ILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVP 251
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
++ Y ++ +S+ K+ SEA K+L +M G +V+TFN +I LCK+ +
Sbjct: 252 NSIVYQTLIHALSQ----KNQV---SEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKI 304
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
DA KL RM G +P+ T+ L+ L + ++ E +++ ++ AI +
Sbjct: 305 HDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGY 364
Query: 387 LTRLCGIERIEQAMSVF-EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ ++++A S E M G PD TY++LM C + A L +E R G
Sbjct: 365 VMS----GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420
Query: 446 VEVKPKEYRV 455
E Y +
Sbjct: 421 CEPNVITYAI 430
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 19/284 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
I L + + ++ L E M G D + V+ LC+ A KLV +
Sbjct: 260 IHALSQKNQVSEALKLLEEMFV-MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG 318
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+PD+ L+ G C GKL+EA+++ ++ N IL+ +
Sbjct: 319 FYPDNMTYGFLLHGLCRIGKLNEARKILIKI--------PCPNNAILNTLINGYVMSGQL 370
Query: 289 RLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ EA+ L + N G ++ T+N+L+ LCK A L M GC PN T
Sbjct: 371 K---EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +L+ L +A + E ++ M + G I Y + LC E++ A+++ +M
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKA-----NALFDEAVRNGV 446
T G PD TY+ L+ C +R+D+A N L D AV N V
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 7/216 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++L+ G C +G L A+ L EM R G E + Y + V+ LC+ L
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL---VNGLCKAG----L 440
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA VL +M G+ N +N LI LC+ + A+ L M GC P+ T+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI L + R+ E + M G Y + L ++A+++ M G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
D TY+ L+ +C ++K L+++ + +G+
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 10/215 (4%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F+ H+ L+D V T + I L+R G + L M G DK + ++
Sbjct: 515 FRLFHNMLLDGA-VANNVTYNTLIHALLRRGAFQKALTLVNDMLFR-GCTLDKITYNGLI 572
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ C+ G +L + + D I C+++I G C GK+D A R+ GF
Sbjct: 573 KAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFV 632
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
V YN +L+ + K+ R K+ L ++ GV + T+N IS CK
Sbjct: 633 PDIVTYNSVLNGLCKVGRIKEALNLFDR-------LQVEGVRPDAFTYNTFISWQCKEGM 685
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
DA FYR E G P+ T+ VL+ +L + +
Sbjct: 686 VNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G +A L +M G L + YN ++ K+ + L E++++D G+
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL---YEQMIMD----GL 596
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+ + N++I+ LCK+ + ++A + G P+ T+ ++ L + R+ E
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ DR++ G Y F++ C + A F + +G P + T+++L+
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV 712
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 151/339 (44%), Gaps = 16/339 (4%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDF-----LVDNKEVLGPKTL 166
+ L F W ++H + D GR K + + + + V+ +
Sbjct: 127 KVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMF 186
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A ++R A + + + F + +DYGF+ D ++++ LC + AE L
Sbjct: 187 AVLLNRYAGAHKVQEAIDMFYK-RKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKK 245
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+E P K ++++ GWCV G L +AKR+ E+ + Y ++ ++K +
Sbjct: 246 DEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKL-- 303
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
S A K+ M G+ +V N +I LC +R +A+++F M + GC +
Sbjct: 304 -----STAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVA 358
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LIK + R+ + E++D M+ G + Y L E+ + +S+ ++M
Sbjct: 359 TYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKT---TEKPKDVISLMQRM 415
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G DS+TY+L++ + + + ++DE RNG
Sbjct: 416 EKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNG 454
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 8/201 (3%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
GFEL V + +L LCR ++ EAE + L + + P ++++N++++ C
Sbjct: 213 GFELDLVGFQILL---MSLCR----YKHVEEAEALFLQKK-DEFPPVIKSWNIILNGWCV 264
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
DA +++ + P+ T+ I SL ++ ++ ++ M G
Sbjct: 265 KGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAI 324
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ +LC +RI +A+ +F +M G D TY+ L+ +C NR++K L D+
Sbjct: 325 CNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDME 384
Query: 443 RNGVEVKPKEYRVDPRYLKKP 463
GV Y + +KP
Sbjct: 385 VKGVSPNNMTYSYILKTTEKP 405
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 166/397 (41%), Gaps = 59/397 (14%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE-----VLGPKTLA 167
A+L FN W ++H T + D GR K K + + E V+ +T A
Sbjct: 129 ALLFFN-WAAGLPAYAHGPRTYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTNRTFA 187
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
++R A + + + F + +DYGF+ D ++++ LC + AE L +
Sbjct: 188 VLLNRYAGAHKVQEAIEMFYK-RKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKKD 246
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLARE----------------------------- 258
E P K ++++ GWCV G L +AKR+ +
Sbjct: 247 EFPPVIKSWNIILNGWCVKGSLPDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTA 306
Query: 259 ------MYRGGFELGTVAYNCILDCVSKLC-RKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
M+ G NCI+D +LC +KK P EA + +M G +V
Sbjct: 307 VKLFTSMWEKGINPDVAICNCIID---QLCFKKKIP-----EALDIFREMTDRGCQADVA 358
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N LI CKIRR+E +L M GC PN T+ ++K+ + V ++ RM
Sbjct: 359 TYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYILKTTEKPKDV---IHLLQRM 415
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ +G + Y L ++ V+++M+ +G PD ++ +++ + R+
Sbjct: 416 EKSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGRL 475
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
D+A + G+ +P+ R L K I +KK
Sbjct: 476 DQALQYYTTMKSRGMTPEPRT-----RILVKAIHMKK 507
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 179/388 (46%), Gaps = 12/388 (3%)
Query: 34 PTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHV 93
P L+ S SS+ SN + ++ AR + L + + + Q L S +
Sbjct: 20 PLCRLSISSCTQSSRDVSNVNLTVEEEEA-ARLIKNSLSKARKWSVQDLIQCLGADCSGI 78
Query: 94 TPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDF 153
T ++V + L + ++ LGF W ++ HT + D G+ + + +
Sbjct: 79 RLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWEL 138
Query: 154 LVD--NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
L D + ++ +T+A I RL A R V+ F+++E D G +R+ +++ ++++ LC+
Sbjct: 139 LSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLE-DMGLERNTETMNVLLDVLCK 197
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
A ++ + I PD ++ + GWC ++DEA EM R GF + Y
Sbjct: 198 ERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITY 257
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+L+ C++++ FR +VL M G NV T+ +++++L K R E+A+
Sbjct: 258 TTVLE---AYCKQRN-FR---RVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALS 310
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID-RMKSAGYAIGKKDYYEFLTRL 390
+ +RM GC P+ + LI L ++ + E ++ M G + Y ++
Sbjct: 311 VSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIF 370
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETY 418
C R + A++V ++M+ PD ++Y
Sbjct: 371 CYYGRDDDALNVLKEMEAQSCKPDIQSY 398
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G E T N +LD LC+++ E + + + +P + TFN+ + C
Sbjct: 180 GLERNTETMNVLLDV---LCKERKI-----EVAREVFAVLSPHIPPDAYTFNIFVHGWCS 231
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
IRR ++A+ M G P+ T+ ++++ + E++D M S G
Sbjct: 232 IRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVIT 291
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y +T L ER E+A+SV +MK+ G PD+ Y+ L+ N + K+ LF+ +
Sbjct: 292 YTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLI------NLLGKSGHLFEAS 344
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL-LDMEYNGV 306
+ +EA ++ M G + T+ YN +++ + K F EA +V ++M NGV
Sbjct: 304 RFEEALSVSHRMKSSGCKPDTLFYNSLINLLGK---SGHLF----EASQVFRVEMPMNGV 356
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD- 365
N+ T+N +IS C R +DA+ + M C P+ ++ L++ +R G+ D
Sbjct: 357 SHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFL--SRRGQADT 414
Query: 366 --EMIDRMKSAGYAIGKKDYYEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ + S D Y L LC + A +F++M + P S+T +L+
Sbjct: 415 VRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLL 474
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + L G+ + F+RME++ G K D + ++++ L Y ++LV D
Sbjct: 270 TYNSIVHGLCCLGQLNEATRLFKRMEQN-GCKPDVVTYNIIIDSL-------YKDRLVND 321
Query: 225 TAN--------EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A+ I PD ++ G C G+L+EA RL ++M + G + VAYN I+D
Sbjct: 322 AADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIID 381
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
LC+ RL ++A + L +M G+P N T++ ++ C + + ++A +LF M
Sbjct: 382 ---SLCKD----RLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
PN TF +L+ L Q V E + + M G Y + C ++
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+A VFE M G PD +Y++L+ +C R+DKA AL +
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQ 538
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 135/279 (48%), Gaps = 9/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ L +G + F++ME++ G K + + +++ LC++ + A + +
Sbjct: 205 INGLCNSGNTNMAVHVFKKMEQN-GCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P D I + ++ G C G+L+EA RL + M + G + V YN I+D + K
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYK-------D 316
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL ++A L +M G+P +V T+ ++ LC + + +AI+LF +M + GC P+ +
Sbjct: 317 RLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAY 376
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I SL + V + E + M G Y L C + ++++A +F++M
Sbjct: 377 NTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVG 436
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
P++ T+ +L+ C V +A +F+ GVE
Sbjct: 437 RNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVE 475
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 12/282 (4%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L +C+ RL V G ++ G + D + ++ +C G A +L +
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKL----GIQPDVITFTTLINGVCNEGKIKVAVELYNEM 189
Query: 226 ANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
D I + LI G C G + A + ++M + G + V YN I+D LC+
Sbjct: 190 VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIID---SLCKD 246
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
RL ++A L +M G+P + T+N ++ LC + + +A +LF RM + GC P+
Sbjct: 247 ----RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ ++I SLY+ V + + + M G Y L LC + ++ +A+ +F+
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
KM+ G PD Y+ ++ C V+ A E V G+
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGI 404
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 131/275 (47%), Gaps = 9/275 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L G+ + + F++ME+ G K D + +++ LC++ + A + + +
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQK-GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE 398
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P + + ++ G+C G+LDEA +L +EM T+ ++ ++D LC+
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVD---GLCQ 455
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + SEA V M GV N+ T+N L++ C + +A K+F M GC P
Sbjct: 456 EG----MVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAP 511
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ +LI + R+ + ++ +M Y + LC + R+ A +F
Sbjct: 512 DLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELF 571
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+KM + G P TY +L+ C H +D+A LF
Sbjct: 572 KKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 135/323 (41%), Gaps = 24/323 (7%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN- 227
C DRLV + F M D G + + ++ C G A +L K+
Sbjct: 384 CKDRLVN-----DAMEFLSEM-VDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR 437
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ P+ +L+ G C +G + EA+ + M G E YN +++ C+
Sbjct: 438 NVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM--- 494
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+EA KV M G ++ ++N+LI+ C RR + A L +M PN T
Sbjct: 495 ----NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVT 550
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ ++K L R+ + E+ +M S+G Y L LC +++A+ +F+ MK
Sbjct: 551 YNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMK 610
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVK 467
PD Y +L+ +++ A LF + +G++ + Y V +
Sbjct: 611 EKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNV----------MI 660
Query: 468 KGKKRETLPEKMARKRRRLKQIR 490
KG +E L ++ R+ K ++
Sbjct: 661 KGLLKEGLSDEAYELFRKWKMMK 683
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 123/317 (38%), Gaps = 62/317 (19%)
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCI--DRLVRAGRPTQV 182
N DE F + GR + P TL I D L + G ++
Sbjct: 419 CNLGQLDEATQLFKEMVGRN----------------VMPNTLTFSILVDGLCQEGMVSEA 462
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIK 241
FE M G + + + ++ C + A K+ + + PD ++LI
Sbjct: 463 RWVFETMTEK-GVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILIN 521
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G+C ++D+AK L +M TV YN I+ + + R D A+++ M
Sbjct: 522 GYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLD-------AQELFKKM 574
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
+G+ + T+++L++ LCK ++A+KLF M E P+ + +LI+ ++
Sbjct: 575 CSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMF----- 629
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
IG K +E A +F K+ DG P TY+++
Sbjct: 630 ----------------IGGK--------------LEVAKGLFSKLSADGIQPPGRTYNVM 659
Query: 422 MTKWCAHNRVDKANALF 438
+ D+A LF
Sbjct: 660 IKGLLKEGLSDEAYELF 676
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ +V TF LI+ +C + + A++L+ M G P+ ++ LI L +
Sbjct: 158 GIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMA 217
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ +M+ G Y + LC + AM +M G PD+ TY+ ++
Sbjct: 218 VHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHG 277
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C ++++A LF +NG + Y +
Sbjct: 278 LCCLGQLNEATRLFKRMEQNGCKPDVVTYNI 308
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
SN +DA+ FYRM P+ F + S+ + + + ++M G
Sbjct: 66 SNSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVT 125
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ LC + ++ A+SV+ KM G PD T+ L+ C ++ A L
Sbjct: 126 HTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVEL 185
Query: 438 FDEAVRNGVE 447
++E VR+G E
Sbjct: 186 YNEMVRSGHE 195
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 154/339 (45%), Gaps = 16/339 (4%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL----VDNKE-VLGPKTL 166
+ L F W ++H + D GR K + + V++++ V+ +
Sbjct: 127 KVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMF 186
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A ++R A + + + F + +DYGF+ D ++++ LC + AE L
Sbjct: 187 AVLLNRYAGAHKVQEAIDMFYK-RKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKK 245
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+E P K ++++ GWCV G L +AKR+ E+ + Y ++ ++K +
Sbjct: 246 DEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKL-- 303
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
S A K+ M G+ +V N +I LC +R +A+++F M + GC +
Sbjct: 304 -----STAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVA 358
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LIK + R+ + E++D M+ G + Y L E+ + +S+ ++M
Sbjct: 359 TYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILK---TTEKPKDVISLMQRM 415
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G DS+TY+L++ + + + ++DE RNG
Sbjct: 416 EKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNG 454
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
GFEL V + +L LCR K EAE + L + + P ++++N++++ C
Sbjct: 213 GFELDLVGFQILL---MSLCRYKHV----EEAEALFLQKK-DEFPPVIKSWNIILNGWCV 264
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
DA +++ + P+ T+ I SL ++ ++ ++ M G
Sbjct: 265 KGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAI 324
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ +LC +RI +A+ +F +M G D TY+ L+ +C NR++K L D+
Sbjct: 325 CNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDME 384
Query: 443 RNGVEVKPKEYRVDPRYLKKP 463
GV Y + +KP
Sbjct: 385 VKGVSPNNMTYSYILKTTEKP 405
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 127/283 (44%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ++ L + GR + FF+ M R G K + +++ G S +
Sbjct: 306 TYGSLLNYLCKNGRCREARFFFDSMIRK-GIKPKVSTYGILIHGYATKGALSEMHSFLDL 364
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + PD I ++ + G +D+A + +M + G V Y ++D + KL R
Sbjct: 365 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D AE M GV N+ FN L+ LC + + E A +L Y M + G P
Sbjct: 425 VDD-------AEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICP 477
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N F LI +L RV EG +ID M+ G Y ++ C R ++A VF
Sbjct: 478 NAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVF 537
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ M + G +P TY+ L+ +C+ +R+D A LF E +R GV
Sbjct: 538 DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 580
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
I L GR + + ME G + D S ++ C G AEK+ +
Sbjct: 486 ICNLCNVGRVMEGRRLIDLMEH-VGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIG 544
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + + L+ G+C ++D+A L REM R G G V YN IL + + R
Sbjct: 545 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRF---- 600
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
SEA+++ L+M +G ++ T+N++++ LCK ++A K+F + G N TF
Sbjct: 601 ---SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 657
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++I +L + R + ++ + + G Y L +E+ S+F M+
Sbjct: 658 TIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 717
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANA 436
+G P+S+ + L+ + + +A A
Sbjct: 718 NGTAPNSQMLNALVRRLLHRGDISRAGA 745
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 128/302 (42%), Gaps = 14/302 (4%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
+ G + + F +M R +G + + +++ LC+ G AE NE + P+
Sbjct: 386 KCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ + L+ G C K + A+ L EM G V +N + + LC E
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL---ICNLCNVGRVM----E 497
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+++ ME+ GV + ++ LIS C R+++A K+F M G P E T+ L+
Sbjct: 498 GRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 557
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
A+R+ + + M G G Y L L +R +A ++ M G
Sbjct: 558 GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKC 617
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
D TY++++ C N VD+A +F G+++ + + L +K G+K +
Sbjct: 618 DIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL-----LKGGRKED 672
Query: 474 TL 475
+
Sbjct: 673 AM 674
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 10/272 (3%)
Query: 178 RPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI 235
R + L M D+G + + S +V+ G L + + P D +
Sbjct: 176 RAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVV 235
Query: 236 C-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+I G C D A+ + ++M GF+ YNC++ + + K E
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWK-------EV 288
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
++L +M G+ + T+ L++ LCK R +A F M G P +T+ +LI
Sbjct: 289 VQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHG 348
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ E +D M G + + F + I++AM +F KM+ G +P+
Sbjct: 349 YATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPN 408
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y L+ C RVD A F++ + GV
Sbjct: 409 VVNYGALIDALCKLGRVDDAEVKFNQMINEGV 440
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 7/207 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C+ G+ DEA+++ M G V YN +L R D + L E
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE----- 574
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M GV V T+N ++ L + +R +A +L+ M G + T+ +++ L ++
Sbjct: 575 --MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKS 632
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
V E +M + S G + + + L R E AM +F + +G P+ TY
Sbjct: 633 NCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTY 692
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+ +++ ++LF +NG
Sbjct: 693 RLVAENLIEEGSLEEFDSLFSAMEKNG 719
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 116/279 (41%), Gaps = 44/279 (15%)
Query: 215 ASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
S+ ++V++ ++++ P+ +LI +C G L+ + + G+ + +A N +
Sbjct: 72 VSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQL 131
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
L LC K R+ + +L M G + ++ +L+ LC +R+E+A++L +
Sbjct: 132 L---KGLCHGK---RVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLH 185
Query: 335 RMGE---WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
M + C PN ++ ++I + +V + + M G Y + LC
Sbjct: 186 MMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLC 245
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLM------TKW-------------------- 425
+ ++A VF++M +G P++ TY+ L+ KW
Sbjct: 246 KAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCY 305
Query: 426 ---------CAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C + R +A FD +R G++ K Y +
Sbjct: 306 TYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 162/362 (44%), Gaps = 34/362 (9%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V TP+LV L G L F L + ++H + D GR +D+K +
Sbjct: 63 VEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWT 122
Query: 153 FLVDNKEV--LGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
LVD LGP KT A +R V AG+P + + F M ++G +D +S +++
Sbjct: 123 -LVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMH-EHGCVQDLNSFNTILDV 180
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
LC++ K V+ N++F + +G+ G+L EA +M + E+
Sbjct: 181 LCKS-------KRVEMADNKLFK-------VFRGFFRAGQLKEAWEFFLQMKKRKCEIDV 226
Query: 269 VAYNCILDC--VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V Y ++ V+ RK A++V +M GV +V T+N I LCK
Sbjct: 227 VTYTTVVHGFGVAGEVRK---------AQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNV 277
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+AI +F M G PN TT+ V+I+ L R+ + E + RMK + Y
Sbjct: 278 ENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVV 337
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD---KANALFDEAVR 443
+ C E IE+ ++VFEKM P+ +TY++L++ + D A L E V
Sbjct: 338 IRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVE 397
Query: 444 NG 445
G
Sbjct: 398 RG 399
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE--------------------DAIKLF 333
A K+ M +G +++ +FN ++ LCK +R E +A + F
Sbjct: 155 AIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFF 214
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
+M + C + T+ ++ A V + + + M G Y F+ LC
Sbjct: 215 LQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKK 274
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +E A+SVFE+M G+ P+S TY++++ C R++KA + E + Y
Sbjct: 275 DNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIY 334
Query: 454 RVDPRYLKKPIAVKKG 469
V RY ++KG
Sbjct: 335 NVVIRYFCDAEEIEKG 350
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 154/339 (45%), Gaps = 16/339 (4%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL----VDNKE-VLGPKTL 166
+ L F W ++H + D GR K + + V++++ V+ +
Sbjct: 107 KVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMF 166
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A ++R A + + + F + +DYGF+ D ++++ LC + AE L
Sbjct: 167 AVLLNRYAGAHKVQEAIDMFYK-RKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKK 225
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+E P K ++++ GWCV G L +AKR+ E+ + Y ++ ++K +
Sbjct: 226 DEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKL-- 283
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
S A K+ M G+ +V N +I LC +R +A+++F M + GC +
Sbjct: 284 -----STAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVA 338
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LIK + R+ + E++D M+ G + Y L E+ + +S+ ++M
Sbjct: 339 TYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILK---TTEKPKDVISLMQRM 395
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G DS+TY+L++ + + + ++DE RNG
Sbjct: 396 EKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNG 434
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
GFEL V + +L LCR K EAE + L + + P ++++N++++ C
Sbjct: 193 GFELDLVGFQILL---MSLCRYKHV----EEAEALFLQKK-DEFPPVIKSWNIILNGWCV 244
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
DA +++ + P+ T+ I SL ++ ++ ++ M G
Sbjct: 245 KGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAI 304
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ +LC +RI +A+ +F +M G D TY+ L+ +C NR++K L D+
Sbjct: 305 CNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDME 364
Query: 443 RNGVEVKPKEYRVDPRYLKKP 463
GV Y + +KP
Sbjct: 365 VKGVSPNNMTYSYILKTTEKP 385
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 44/320 (13%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
G T + ID L + GR + FE M+ G D S ++ C G ++ L
Sbjct: 236 GVITYSIIIDGLCKVGREDEAKELFEEMKAQ-GMIPDVISYSTLIHGFCCAGKWDQSKHL 294
Query: 222 VKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ ++ + PD +LI C +GK+ EAK+L M + G + YN ++D
Sbjct: 295 FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLID---G 351
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
C D L+S A ++ L M G+ + ++ LI+ CK + ++A+ L+ M + G
Sbjct: 352 FCMVGD---LNS-ARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVG 407
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC--------- 391
PN TT+ L+K L+Q +VG+ ++ MK+ G + + Y FL LC
Sbjct: 408 KSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAM 467
Query: 392 -------------GIE-------------RIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
IE ++E A +FEK+ +G PD TY++++ +
Sbjct: 468 ELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGF 527
Query: 426 CAHNRVDKANALFDEAVRNG 445
C +VD AN LF++ NG
Sbjct: 528 CKVGQVDNANILFEKMEENG 547
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 96/223 (43%), Gaps = 13/223 (5%)
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L EM G + + +C+ + R SEA + + G NV T+
Sbjct: 113 LYNEMRLAGLSPDLFTLSILANCLCNVNRV-------SEALAAMAGILRRGYIPNVVTYT 165
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG----DEMIDR 370
LI LC R +A +LF RM + GC PN T+ LIK L Q V EM++
Sbjct: 166 TLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLND 225
Query: 371 MKSAGYAI--GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
G G Y + LC + R ++A +FE+MK G PD +Y L+ +C
Sbjct: 226 ASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCA 285
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+ D++ LFDE V GV+ + V L K V + KK
Sbjct: 286 GKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 135/309 (43%), Gaps = 30/309 (9%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ I AG+ Q F+ M D G + D + ++++ LC+ G + A+KL++
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEM-VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI 334
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
I P+ + LI G+C+ G L+ A+ L M G E ++Y +++ K + K
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394
Query: 286 DPFRLDSE----------------------------AEKVLLDMEYNGVPRNVETFNVLI 317
+ L +E A+K+ M+ GV N + + + +
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LCK +A++LF + + N + LI L +A ++ E+ +++ G
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + C + +++ A +FEKM+ +G PD Y+ L+ +C N++++ L
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574
Query: 438 FDEAVRNGV 446
+ V+ V
Sbjct: 575 LHKMVQKDV 583
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 13/222 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +L C ++ EA + R G+ V Y + + LC + R+
Sbjct: 124 PDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTL---IKGLCMEH---RI 177
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM----GEWG--CHPN 344
SEA ++ L M+ G N T+ LI LC+ A+KL M ++G C P
Sbjct: 178 -SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPG 236
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ ++I L + R E E+ + MK+ G Y + C + +Q+ +F+
Sbjct: 237 VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M G PD T+ +L+ C +V +A L + ++ G+
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGI 338
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 122/297 (41%), Gaps = 17/297 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ + K + + ++ V T S ID G F M G + D+ S
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSK-GLEPDEIS 379
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-----PDDKICDLLIKGWCVDGKLDEAKRLA 256
++ C+ ++ K + NE+ P+ L+KG GK+ +AK+L
Sbjct: 380 YTTLINGYCK----TWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLF 435
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M G + Y LD LC+ F EA ++ +++ N+E ++ L
Sbjct: 436 GVMKTYGVSANSQIYGIFLD---GLCKNDCLF----EAMELFNELKSYNFKLNIENYSCL 488
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I LCK + E A +LF ++ + G P+ T+ ++I + +V + + ++M+ G
Sbjct: 489 IDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGC 548
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
Y L C ++E+ + + KM +P++ + +++ C + K
Sbjct: 549 TPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKK 605
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 167/400 (41%), Gaps = 49/400 (12%)
Query: 95 PTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL 154
P+ LV LN LGF W + H+ E + D G+ K F + D +
Sbjct: 122 PSSGLVSQVLNRFSNDWVPALGFFKWAKSQTGYRHSPELCNLMVDILGKCKSFDPMSDLV 181
Query: 155 VDNKEV----LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ ++ + +T+A I RL +A + + F RM++ +G +D +L ++++ L
Sbjct: 182 EEMAKLEQGYVTLETMAKVIRRLAKARKHEDAIEAFRRMDK-FGVNKDTAALNVLIDALV 240
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ +A K+V + I ++L+ GWC K D A++ +M GFE +
Sbjct: 241 KGDSVEHAHKVVLEFKGLIPLSSHSFNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFS 300
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y ++ C ++D FR + ++VL +M NG P N T+ ++ +L K + A+
Sbjct: 301 YTSFIEAY---CHERD-FR---KVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKAL 353
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+++ +M GC + + +I L +A R+ + ++ + M G Y ++
Sbjct: 354 EVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTA 413
Query: 391 CGIERIEQAMSVFEKMKTDGH------------------------------------NPD 414
C R E A+ + ++M+ DG +PD
Sbjct: 414 CAHSREETALRLLKEME-DGSCKPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPD 472
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
TY LL+ C +V A + +E V G KP +
Sbjct: 473 LATYSLLVNALCKTGKVADAYSFLEEMVLKGFTPKPSTLK 512
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 155/355 (43%), Gaps = 13/355 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+PSLV L AG L F W + F ++ E+ + G+ K F I + +
Sbjct: 4 SPSLVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVT 63
Query: 156 DNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
D K+ +L +T A R RA + + + F +ME+ +G K + + +++ LC++
Sbjct: 64 DMKQKGLLNKETFALISRRYARARKVKEAVDAFMKMEK-FGLKIESSDVNRLLDTLCKSR 122
Query: 214 YASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
A+ LV D N+ D K +L++GW + L + EM GFE V Y
Sbjct: 123 QVERAQ-LVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTY 181
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+++ K R D L E ME + + LI+ L +R +A++
Sbjct: 182 GILINAHCKSRRYDDAIELFHE-------MEAKNCKPSPHIYCTLINGLGAEKRLSEALE 234
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
F G P T+ ++ + + R+ + ID M+ G + Y L L
Sbjct: 235 FFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLI 294
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ + A SVF+KM +G P TY++++ +C +RVD A ++D+ G+
Sbjct: 295 RAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGI 349
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 158/331 (47%), Gaps = 11/331 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S + T ++V + L + ++ LGF W ++ HT + D G+ + +
Sbjct: 42 SGIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQM 101
Query: 151 HDFLVD--NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ L D + ++ +T+A I RL A R V+ F+++E D G +R+ +++ ++++
Sbjct: 102 WELLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLE-DMGLERNTETMNVLLDV 160
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
LC+ A ++ + I PD ++ + GWC ++DEA EM R GF
Sbjct: 161 LCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSV 220
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ Y +L+ C++++ FR +VL M G NV T+ +++++L K R E+
Sbjct: 221 ITYTTVLE---AYCKQRN-FR---RVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEE 273
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID-RMKSAGYAIGKKDYYEFL 387
A+ + +RM GC P+ + LI L ++ + E ++ M G + Y +
Sbjct: 274 ALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMI 333
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ C R + A++V ++M+ PD ++Y
Sbjct: 334 SIFCYYGRDDDALNVLKEMEAQSCKPDIQSY 364
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G E T N +LD LC+++ E + + + +P + TFN+ + C
Sbjct: 146 GLERNTETMNVLLDV---LCKERKI-----EVAREVFAVLSPHIPPDAYTFNIFVHGWCS 197
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
IRR ++A+ M G P+ T+ ++++ + E++D M S G
Sbjct: 198 IRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVIT 257
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y +T L ER E+A+SV +MK+ G PD+ Y+ L+ N + K+ LF+ +
Sbjct: 258 YTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLI------NLLGKSGHLFEAS 310
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL-LDMEYNGV 306
+ +EA ++ M G + T+ YN +++ + K F EA +V ++M NGV
Sbjct: 270 RFEEALSVSHRMKSSGCKPDTLFYNSLINLLGK---SGHLF----EASQVFRVEMPMNGV 322
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD- 365
N+ T+N +IS C R +DA+ + M C P+ ++ L++ +R G+ D
Sbjct: 323 SHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFL--SRRGQADT 380
Query: 366 --EMIDRMKSAGYAIGKKDYYEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ + S D Y L LC + A +F++M + P S+T +L+
Sbjct: 381 VRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLL 440
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 8/276 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ L + G + F ++ + +K + + +++ C+ G + AE L+
Sbjct: 292 THTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGR 351
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI G C +G + A L +M R GF+ YN ++D LC+
Sbjct: 352 MVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALID---GLCK 408
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA KVL G+ + T+ V+I+ CK A+ LF RM E GCHP
Sbjct: 409 KGKI----QEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHP 464
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI Q ++ E ++ D+ + K+ Y + C + + A+ VF
Sbjct: 465 DIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVF 524
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
E+M +G DS TY L++ C +R+++A AL++
Sbjct: 525 ERMVQNGCQADSITYGALISGLCKESRLEEARALYE 560
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 13/289 (4%)
Query: 173 LVRAGRPTQVLGF----FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
++RAG T + F+ M G D S R ++ C +G + L+ +
Sbjct: 155 VLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQ 214
Query: 229 IFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
F D+ C ++++ +C G+ + L R M G V Y +D + K K
Sbjct: 215 GFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQA 274
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNET 346
F VL +M G+ NV T LI+ LCKI +E A +LF ++ + + PN
Sbjct: 275 F-------YVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVH 327
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ V+I + ++ + ++ RM G A Y ++ C A + KM
Sbjct: 328 TYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKM 387
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ +G P+ TY+ L+ C ++ +A + A G+++ Y V
Sbjct: 388 RREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTV 436
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 10/310 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR ++ A+ + L T + + GR V F RM + G + +
Sbjct: 199 GRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRM-LEMGTPPNVVN 257
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC+ Y A ++++ A + P+ LI G C G + A RL ++
Sbjct: 258 YTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLI 317
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ V ++ + C++ R AE +L M G+ N T+ LIS
Sbjct: 318 KSSSYKPNVHTYTVM--IGGYCKEGKLAR----AEMLLGRMVEQGLAPNTNTYTTLISGH 371
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK A +L +M G PN T+ LI L + ++ E +++ + G + K
Sbjct: 372 CKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDK 431
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y +T C I A+ +F +M +G +PD TY L+ ++C +++++ LFD+
Sbjct: 432 VTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDK 491
Query: 441 AVRNGVEVKP 450
+ +E+ P
Sbjct: 492 CL--AIELVP 499
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 113/261 (43%), Gaps = 16/261 (6%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGW 243
+M R+ GF+ + + +++ LC+ G A K+++ N+ DK+ ++I
Sbjct: 383 LMNKMRRE-GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEH 441
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD--M 301
C G + A L M G Y + +++ C+++ E + L D +
Sbjct: 442 CKQGHITYALDLFNRMAENGCHPDIHTYTTL---IARYCQQRQ-----MEESQKLFDKCL 493
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
VP +T+ +I+ CK+ +S A+++F RM + GC + T+ LI L + +R+
Sbjct: 494 AIELVPTK-QTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRL 552
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E + + M + C E+ A+S+ +++ N T ++L
Sbjct: 553 EEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKN---HTVNVL 609
Query: 422 MTKWCAHNRVDKANALFDEAV 442
+ K A V+ A+ +A+
Sbjct: 610 VRKLSAIGHVEDASLFLKKAL 630
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 69/188 (36%), Gaps = 36/188 (19%)
Query: 293 EAEKVLLDMEYNGVPRNVET------------------------------------FNVL 316
EA ++ +M +G+P VET F L
Sbjct: 132 EAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRAL 191
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I C+ R E+ L M G + T V+++ Q R + E+ RM G
Sbjct: 192 IVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGT 251
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+Y ++ LC ++QA V E+M G P+ T+ L+ C ++A
Sbjct: 252 PPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFR 311
Query: 437 LFDEAVRN 444
LF + +++
Sbjct: 312 LFLKLIKS 319
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 158/331 (47%), Gaps = 11/331 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S + T ++V + L + ++ LGF W ++ HT + D G+ + +
Sbjct: 30 SGIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQM 89
Query: 151 HDFLVD--NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ L D + ++ +T+A I RL A R V+ F+++E D G +R+ +++ ++++
Sbjct: 90 WELLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLE-DMGLERNTETMNVLLDV 148
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
LC+ A ++ + I PD ++ + GWC ++DEA EM R GF
Sbjct: 149 LCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSV 208
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ Y +L+ C++++ FR +VL M G NV T+ +++++L K R E+
Sbjct: 209 ITYTTVLE---AYCKQRN-FR---RVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEE 261
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID-RMKSAGYAIGKKDYYEFL 387
A+ + +RM GC P+ + LI L ++ + E ++ M G + Y +
Sbjct: 262 ALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMI 321
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ C R + A++V ++M+ PD ++Y
Sbjct: 322 SIFCYYGRDDDALNVLKEMEAQSCKPDIQSY 352
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G E T N +LD LC+++ E + + + +P + TFN+ + C
Sbjct: 134 GLERNTETMNVLLDV---LCKERKI-----EVAREVFAVLSPHIPPDAYTFNIFVHGWCS 185
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
IRR ++A+ M G P+ T+ ++++ + E++D M S G
Sbjct: 186 IRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVIT 245
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y +T L ER E+A+SV +MK+ G PD+ Y+ L+ N + K+ LF+ +
Sbjct: 246 YTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLI------NLLGKSGHLFEAS 298
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL-LDMEYNGV 306
+ +EA ++ M G + T+ YN +++ + K F EA +V ++M NGV
Sbjct: 258 RFEEALSVSHRMKSSGCKPDTLFYNSLINLLGK---SGHLF----EASQVFRVEMPMNGV 310
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD- 365
N+ T+N +IS C R +DA+ + M C P+ ++ L++ +R G+ D
Sbjct: 311 SHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFL--SRRGQADT 368
Query: 366 --EMIDRMKSAGYAIGKKDYYEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ + S D Y L LC + A +F++M + P S+T +L+
Sbjct: 369 VRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLL 428
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 15/305 (4%)
Query: 141 FGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
+ + KDF FL V N + T + +D L +AGR + + M RD G
Sbjct: 55 YSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEM-RDKGCSP 113
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+ + ++VE LCE A+K++++ A FPD + IKG C ++DEA++
Sbjct: 114 NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF- 172
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ R V+Y + ++ LC+ D LDS A ++L M G +V T++ L
Sbjct: 173 --LARMPVTPDVVSYTTV---INGLCKSGD---LDS-ASRMLDQMTNRGCTPDVVTYSSL 223
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I CK E A+ L M + GC PN + L+ +L++ +G+ ++M+ M+ G+
Sbjct: 224 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 283
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + LC ER+++A +VF++M G P++ +Y +L+ + C +D A
Sbjct: 284 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAIT 343
Query: 437 LFDEA 441
L ++A
Sbjct: 344 LVEQA 348
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 13/272 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + R + F RM D S V+ LC++G A +++
Sbjct: 152 TYNSFIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGDLDSASRMLDQ 207
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N PD LI G+C G+++ A L M + G VAYN +L + +L
Sbjct: 208 MTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 267
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+AE +L++ME G +V ++N I LCK R + A +F RM E GC P
Sbjct: 268 I-------GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 320
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N +++ +L++ L + + + ++++ + + Y L LC R ++A ++F
Sbjct: 321 NASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALF 380
Query: 404 EKMKTDG-HNPDSETYDLLMTKWCAHNRVDKA 434
K+ + PD Y++++ C ++DKA
Sbjct: 381 SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 412
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PDD I + LI G+ +A + EM + V Y I+D + K R KD
Sbjct: 43 PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKD---- 98
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A K+L +M G N+ T+NV++ LC+ R+ ++A K+ M G P+ T+
Sbjct: 99 ---AVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 155
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
IK L + RV E + + RM + Y + LC ++ A + ++M G
Sbjct: 156 FIKGLCKCDRVDEARKFLARMPVTPDVV---SYTTVINGLCKSGDLDSASRMLDQMTNRG 212
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY L+ +C V++A L D ++ G
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 247
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 10/232 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
++ G C G+ +A +L EM G YN I V LC ++ +LD EA+K+L
Sbjct: 86 IVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVI---VEGLCEER---KLD-EAKKML 138
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G +V T+N I LCK R ++A K RM P+ ++ +I L ++
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKS 195
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ M+D+M + G Y + C +E+AM + + M G P+ Y
Sbjct: 196 GDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAY 255
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
+ L+ + KA + E R G Y L K VKK K
Sbjct: 256 NSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 307
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
TF +L+ LC+ + E A +L RM E GC P++ + LI +A G+ + + M
Sbjct: 12 TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
Y + LC R + A+ + ++M+ G +P+ TY++++ C ++
Sbjct: 72 VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 131
Query: 432 DKANALFDE-AVRN 444
D+A + +E AVR
Sbjct: 132 DEAKKMLEEMAVRG 145
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A ++L M+ G + +N LIS K + A K M + C P T+ ++
Sbjct: 28 KARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIV 87
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L +A R + +++D M+ G + Y + LC ++++A + E+M G+
Sbjct: 88 DGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF 147
Query: 413 PDSETYDLLMTKWCAHNRVDKA 434
PD TY+ + C +RVD+A
Sbjct: 148 PDVVTYNSFIKGLCKCDRVDEA 169
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 126/313 (40%), Gaps = 48/313 (15%)
Query: 168 SCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+CID L +A R + F+RM ER G + S ++VE+LC+ A LV+
Sbjct: 292 ACIDGLCKAERVKKAKAVFDRMVER--GCTPNASSYSMLVEELCKKKELDDAITLVEQAR 349
Query: 227 NEI-FPDDKICDLLIKGWCVDGKLDEAKRL-AREMYRGGFELGTVAYNCILD-------- 276
+ D + +L+ G C G+ DEA L ++ + E YN +LD
Sbjct: 350 EKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 409
Query: 277 ---------------C--------VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
C V LC RL S+AE +LL M G + T+
Sbjct: 410 DKALQIHKQMLERNCCNVVTWNILVHGLCVDD---RL-SDAETMLLTMVDEGFIPDFVTY 465
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
L+ +CK +S A++LF + GC P+ T+ LI L E + ++
Sbjct: 466 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDV 525
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT-KWCAHNRVD 432
A + Y E + + + +F ++ P++ T+ ++ K +
Sbjct: 526 ALWNAMILGYAENGSG-------DLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLG 578
Query: 433 KANALFDEAVRNG 445
KA LFD AV+ G
Sbjct: 579 KARGLFDRAVKGG 591
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 183/429 (42%), Gaps = 27/429 (6%)
Query: 27 TYFSRFSPTHY----LNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLP- 81
T RF+ H L F P + P I + +++ R +S + P P
Sbjct: 66 TVAQRFTDEHASAEPLRFTVTPGDAFGDGPPVGISEAAKMVCRIVSTQ--------PEPR 117
Query: 82 ISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYF 141
I+ L + V +P LV L AG L F W + FS+T E +
Sbjct: 118 IASTLDAL--GVAMSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEAL 175
Query: 142 GRRKDFKAIHDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
G+ K FK + + + + +L T + R RA + + + FE+M +G K +
Sbjct: 176 GKIKQFKLVWSLVETMRCRGLLSKDTFKLIVRRYARARKVKEAVETFEKMS-IFGLKTEL 234
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTA--NEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+++ L ++ A+ + K+ + PD K +L++GW + L K + +
Sbjct: 235 SDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQ 294
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM G VAY + +S C+ EA KV +ME +G + + +LI
Sbjct: 295 EMIDAGIRPDVVAYGML---ISAFCKSGKC----DEAIKVFYEMEASGCMPSPHVYCMLI 347
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ L R ++A+K F + + G T ++ + +A++ +M+D M+
Sbjct: 348 NGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIG 407
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y L L ++ E+A +VF++M DG P TY +++ +C++ RVD A +
Sbjct: 408 PNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNV 467
Query: 438 FDEAVRNGV 446
+ + GV
Sbjct: 468 WKQMGERGV 476
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLD 250
D G + D + +++ C++G A K+ + A+ P + +LI G + +LD
Sbjct: 298 DAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLD 357
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA + + + GF + N ++ + + + F++ E M + N
Sbjct: 358 EALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDE-------MRECKIGPNS 410
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T++V++ L K ++ E+A +F RMG GC P T+ +++ RV + +
Sbjct: 411 RTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQ 470
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G + + LC R+E+A F++M G P + + L R
Sbjct: 471 MGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGR 530
Query: 431 VDKANAL 437
+ A +
Sbjct: 531 ISLAQEM 537
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 9/212 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P I+ L R + L +FE+ ++ GF + + VV C +A K+V
Sbjct: 340 PHVYCMLINGLGSEERLDEALKYFEQYKKS-GFPMEVPTCNAVVGAYCRASKFEHAFKMV 398
Query: 223 KDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ +I P+ + D+++ K +EA + + M G E Y + V
Sbjct: 399 DEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMM---VGMF 455
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C R+D A V M GV + F+ LI+ LC R E+A F M + G
Sbjct: 456 CSNG---RVDM-ALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGI 511
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
P F L ++L + R+ EM ++ +
Sbjct: 512 RPPGQLFSNLKEALVEGGRISLAQEMASKLDA 543
>gi|357450985|ref|XP_003595769.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484817|gb|AES66020.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 497
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 174/384 (45%), Gaps = 40/384 (10%)
Query: 82 ISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYF 141
I Q L+LI H P +LV L + F W+++ N++ + E + +
Sbjct: 84 IEQALNLIGIH--PNNNLVLQVLQRHRSDWKPAFIFFKWVSKTNNYTPSCEVYNEIINIL 141
Query: 142 GRRKDFKAIH---DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
G+ K F+ +H D + KE + +T I R V A + + + F R E ++G +
Sbjct: 142 GKMKCFEELHQVLDEMSQRKEFINEETFCILIRRFVAAHKLEEAINIFYRRE-EFGLDNE 200
Query: 199 KDS--LRLVVEKLCENGYASYAEKLVKDTANEI--FPDDKICDLLIKGWCVDGKLDEAKR 254
DS R ++ +C + AE L N+ D K ++++ GWCV G EAKR
Sbjct: 201 LDSKAFRTLLMWMCRYKHIEEAETLFHRNLNKFRFCRDIKTWNVILNGWCVLGNTHEAKR 260
Query: 255 LAREMYRGGFELGTVAYNC--ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L +++ +AY C I +C E V D+E +V
Sbjct: 261 LWKDI---------IAYKCKEIGNCF----------------EVVQWDVEEESCKPDVVI 295
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM- 371
FN LI LC +R +A+++F+ M E C PN T+ LIK L++ R+ + E+++ M
Sbjct: 296 FNCLIDGLCFKKRIPEALQVFHDMKERDCLPNVATYNSLIKHLFKIRRMEKVYELVEDME 355
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ +G + Y +L L ++ E+ +V E+M+ +G + +L++ + + +
Sbjct: 356 RRSGDCLPNGVTYSYL--LQSLKAPEEVPAVLERMERNGCAMSDDICNLILRLYMKWDDL 413
Query: 432 DKANALFDEAVRNGVEVKPKEYRV 455
D +DE RNG+ + Y +
Sbjct: 414 DGLRKTWDEMERNGLGPDRRSYTI 437
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 147/344 (42%), Gaps = 12/344 (3%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDF--LVDNKEVLGP-KTLASCID 171
L F +W T F H+ E D G+ + F L+ + V P +T +
Sbjct: 1162 LAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVR 1221
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
R V+AG + + F RME DYG K DK + +V+ L + A A+ + P
Sbjct: 1222 RYVKAGLAAEAVHAFNRME-DYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEP 1280
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + L+ GWC G + EA+R+ EM G Y+ ++D LCR R
Sbjct: 1281 DVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVID---ALCRSGQITR-- 1335
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A V +M G N TFN L+ K R+E ++++ +M GC P+ T+ L
Sbjct: 1336 --AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFL 1393
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I+S + + E ++++ +K G + + + + + A +F KMK
Sbjct: 1394 IESHCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKC 1452
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P++ TY++LM + D L E N +E YRV
Sbjct: 1453 RPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRV 1496
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L R+G+ T+ F M D G + + ++ + G ++
Sbjct: 1319 TYSIVIDALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQ 1377
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D I + LI+ C D L+EA ++ + + G L ++N I C+SKL
Sbjct: 1378 MKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGD 1436
Query: 284 KKDPFRL------------------------DSEAEKVLL----DMEYNGVPRNVETFNV 315
R+ D ++ ++L +M+ N + N T+ V
Sbjct: 1437 VNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRV 1496
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGC-HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LIS C I +A F M E C P+ + ++++ L +A ++ + +E++++M +
Sbjct: 1497 LISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNR 1556
Query: 375 GYA 377
G+
Sbjct: 1557 GFV 1559
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 154/336 (45%), Gaps = 12/336 (3%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKTLASC 169
++ LG W + H E D G+ K + + L ++ ++ T+
Sbjct: 55 KSALGVFRWAGLRPGYKHRPEAYDMMVDILGKMKQMDQMRELLEEMNRNHLVTLNTVGKA 114
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ R AG+ + F+ + +G +++ +S+ L+++ LC+ G A + + + I
Sbjct: 115 MRRFSGAGKWEDAVRMFDEL-GTFGLEKNAESMNLLLDTLCKEGKVEQARAIFLELKSHI 173
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P+ ++ I GWC +DEA +EM F ++Y+ I + CR+ +
Sbjct: 174 LPNAHTFNIFIHGWCKANLVDEAHWTLQEMKGHAFRPCVISYSTI---ILFYCRQHNF-- 228
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
S+ ++L +ME G P NV T+ +I L K + +E+A++L RM GC P+ F
Sbjct: 229 --SKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQRMKSAGCKPDTPFFN 286
Query: 350 VLIKSLYQAARVGEGDEMIDR-MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L +A R E ++ ++ M +AG + Y + LC + +A+S+ +M+T
Sbjct: 287 SLIYILGRAGRFQEAVDVFEKEMPNAGVSRDTSTYNSMIAMLCHHGHVSKALSLLREMET 346
Query: 409 DG-HNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
D +T+ L+ ++ + L D+ V+
Sbjct: 347 SAPFKLDGQTFYPLLKSCLRTGDMNLLSQLLDDMVK 382
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 8/199 (4%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
GK ++A R+ E+ G E + N +LD LC++ +A + L+++ + +
Sbjct: 122 GKWEDAVRMFDELGTFGLEKNAESMNLLLD---TLCKEGKV----EQARAIFLELKSHIL 174
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P N TFN+ I CK ++A M P ++ +I + + E
Sbjct: 175 P-NAHTFNIFIHGWCKANLVDEAHWTLQEMKGHAFRPCVISYSTIILFYCRQHNFSKVYE 233
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++D M++ G Y + L + E+A+ + ++MK+ G PD+ ++ L+
Sbjct: 234 LLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQRMKSAGCKPDTPFFNSLIYILG 293
Query: 427 AHNRVDKANALFDEAVRNG 445
R +A +F++ + N
Sbjct: 294 RAGRFQEAVDVFEKEMPNA 312
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 79/185 (42%), Gaps = 9/185 (4%)
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
R G++ AY+ ++D + K+ ++ D R ++L +M N + + T +
Sbjct: 67 RPGYKHRPEAYDMMVDILGKM-KQMDQMR------ELLEEMNRNHLV-TLNTVGKAMRRF 118
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ EDA+++F +G +G N + +L+ +L + +V + + +KS
Sbjct: 119 SGAGKWEDAVRMFDELGTFGLEKNAESMNLLLDTLCKEGKVEQARAIFLELKSHILP-NA 177
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ F+ C +++A ++MK P +Y ++ +C + K L DE
Sbjct: 178 HTFNIFIHGWCKANLVDEAHWTLQEMKGHAFRPCVISYSTIILFYCRQHNFSKVYELLDE 237
Query: 441 AVRNG 445
G
Sbjct: 238 MEAQG 242
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW-GCHPN--- 344
R+ S +++LL + V N+E N L+ L + R +D K + W G P
Sbjct: 15 RVGSSPDEILLSLADEQVCDNIEVSNDLVDKL--LLRFKDDWKSALGVFRWAGLRPGYKH 72
Query: 345 -ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ +++ L + ++ + E+++ M + + + + + R G + E A+ +F
Sbjct: 73 RPEAYDMMVDILGKMKQMDQMRELLEEM-NRNHLVTLNTVGKAMRRFSGAGKWEDAVRMF 131
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+++ T G ++E+ +LL+ C +V++A A+F E
Sbjct: 132 DELGTFGLEKNAESMNLLLDTLCKEGKVEQARAIFLE 168
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 163/356 (45%), Gaps = 14/356 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL- 154
+P LV L AG L F W + F +T ++ + G+ K F+ + +
Sbjct: 144 SPQLVAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIKQFRLVWSLVE 203
Query: 155 -VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+ + +L T + R RA + + + FE+M +G K D +++ L ++
Sbjct: 204 AMRCRGLLSKDTFRLIVRRYARARKVKEAVETFEKMA-GFGLKADLSDYNWLIDVLSKSK 262
Query: 214 YASYAEKLVKDTA--NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
A + K+ PD K +L++GW + L K + +EM G + VAY
Sbjct: 263 QVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAY 322
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+ +S C+ + D EA KV +ME NG + + +LI+ L R ++A+K
Sbjct: 323 GML---ISSFCKSG---KCD-EAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALK 375
Query: 332 LFYRMGEWGCHPNET-TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
++ + + P E T ++ + ++++ +M+D M+ +G + Y L L
Sbjct: 376 -YFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHL 434
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++IE+A +VF+ M DG P TY +++ +C++ RVD A ++++ GV
Sbjct: 435 IKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGV 490
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 13/291 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTA 226
+ ID + + + + M G D + ++ C G + A L K +
Sbjct: 201 TIIDSMCKVKLVNEAFDLYSEMVSK-GISPDVVTYSALISGFCILGKLNDAIGLFNKMIS 259
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRK 284
EI PD +L+ G+C +G++ EAK + M + G + V Y ++D C+ K K
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNK 319
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
A+ + M GV NV+++N++I+ CKI++ ++A+ LF M P+
Sbjct: 320 ---------AKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPD 370
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ LI L ++ ++ +++D M G K Y L LC ++++A+++
Sbjct: 371 VVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 430
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
KMK +G PD TY +L+ C R+ A +F++ + G + Y V
Sbjct: 431 KMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTV 481
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 8/248 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G++ + +L +++ LC G A F +K+C LI G C G+ A
Sbjct: 121 GYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAA 180
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L R + + V YN I+D + K+ + F L SE M G+ +V T
Sbjct: 181 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE-------MVSKGISPDVVT 233
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LIS C + + DAI LF +M +P+ TF +L+ + RV E ++ M
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + C ++++ +A S+F M G + ++Y++++ +C +VD
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353
Query: 433 KANALFDE 440
+A LF E
Sbjct: 354 EAMNLFKE 361
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 143/313 (45%), Gaps = 16/313 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D + GR + M + G K D + +++ C + A+ +
Sbjct: 268 TFSILVDGFCKEGRVKEAKNVLAMMMKQ-GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNT 326
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + + + +++I G+C K+DEA L +EM+ V YN ++D LC+
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLID---GLCK 383
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
S A K++ +M GVP + T+N ++ LCK + + AI L +M + G P
Sbjct: 384 SGKI----SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 439
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +LI L + R+ + + + + GY I Y + C + ++A+++
Sbjct: 440 DMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALL 499
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK-PKEYRVDPRYLKK 462
KM+ +G P+++TY++++ + D A L E + G+ K Y + R+ ++
Sbjct: 500 SKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFGWKKAYCLFTRFFQR 559
Query: 463 ------PIAVKKG 469
P+ V+ G
Sbjct: 560 RSNLYPPLEVRSG 572
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 135/292 (46%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I G+ +G F +M + D + ++V+ C+ G A+ ++
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISE-EINPDVYTFSILVDGFCKEGRVKEAKNVLAM 291
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I PD L+ G+C+ ++++AK + M +GG +YN +++ K+ +
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKI-K 350
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K D EA + +M + +V T+N LI LCK + A+KL M + G
Sbjct: 351 KVD------EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPH 404
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
++ T+ ++ +L + +V + ++ +MK G Y + LC R++ A ++F
Sbjct: 405 DKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIF 464
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E + G+N TY +++ +C ++ DKA AL + NG K Y +
Sbjct: 465 EDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEI 516
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 109/279 (39%), Gaps = 44/279 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ LV+ + ME + G D + +++ + G+ ++ + + +
Sbjct: 63 LGSLVKINCYQTAISLHREMEFN-GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKG 121
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ LIKG C+ G++ +A ++ GF L V Y
Sbjct: 122 YEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYG---------------- 165
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
LI+ LCK+ ++ A++L R+ PN +
Sbjct: 166 --------------------------TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 199
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I S+ + V E ++ M S G + Y ++ C + ++ A+ +F KM +
Sbjct: 200 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMIS 259
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ NPD T+ +L+ +C RV +A + ++ G++
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIK 298
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 13/225 (5%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
IF KI L+K C A L REM G V +N +++C S+L F
Sbjct: 56 IFEFGKILGSLVKINC----YQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSF 111
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
V ++ G N T LI LC + A+ ++ G H N+ +
Sbjct: 112 -------SVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCY 164
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L + + +++ R+ Y + +C ++ + +A ++ +M +
Sbjct: 165 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 224
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G +PD TY L++ +C +++ A LF++ + E+ P Y
Sbjct: 225 KGISPDVVTYSALISGFCILGKLNDAIGLFNKMISE--EINPDVY 267
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 187/452 (41%), Gaps = 39/452 (8%)
Query: 19 HRFISPQSTYFSRFSPTHYLNFL------------SKPFSSKPTSNPKTIDDPDQV--IA 64
HRF+S ++ + F ++ SK +K ++N + D V I
Sbjct: 99 HRFVSANTSLYLLFCHVGAVDIYQRKYPTKNGFNPSKSLRAKASANALVVQQEDTVNKIC 158
Query: 65 RSLSGELLENLEADPL-PISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQ 123
+++ + E L+ + L ++Q L+ P V LN +A A L F W +
Sbjct: 159 KAIEEDQWECLQDNFLNSMAQDLN---------PDAVVKVLNLQTDAQNA-LRFFQWADK 208
Query: 124 NANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV----RAGRP 179
+ H + D GR K F + L+ + G + S + V R+GR
Sbjct: 209 QEGYDHNTDAYFTMIDILGRAKMFTELQS-LLQKMQTQGREITRSMLHSFVMSYGRSGRF 267
Query: 180 TQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICD 237
+ L F M E Y + V+ L +N AE L N + ++
Sbjct: 268 KESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYT 327
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+I+ + + K+++A +L +M + + V Y + +S LC++K + +A V
Sbjct: 328 SMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIV---ISALCKRK----MIEQAYGV 380
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L M NG N+ T+N LI LC +RR E+A++L M + G PN T+ +L L +
Sbjct: 381 LQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCK 440
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
R+ EM + + G + Y L C R+ +AM + ++M + PD T
Sbjct: 441 LRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVT 500
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
Y L+ N++ A + DE G +V
Sbjct: 501 YTTLIQGLVQGNQLPDALRMHDEMENKGYDVN 532
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 136/323 (42%), Gaps = 24/323 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L RP + L ME+ G + + ++ LC+ A+++ +
Sbjct: 395 TYNALIQGLCAVRRPEEALELVTLMEQG-GVPPNIYTYTILTHGLCKLRRLDRAKEMFNE 453
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + P+ + L+ G+C +L EA + +EM++ V Y ++ + + +
Sbjct: 454 ALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQ 513
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D R+ E ME G N +T N+L L ++ +DA + RM + G
Sbjct: 514 LPDALRMHDE-------MENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAY 566
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + + + I L A + E ++ M + GY+ Y + C R++ A ++
Sbjct: 567 SASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAML 626
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
M +G PD+ +Y++L+ ++ R A+ L+ A+ GV + PK +P
Sbjct: 627 NFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPKPVIQEP------ 680
Query: 464 IAVKKGKKRETLPEKMARKRRRL 486
+ LPE + R + L
Sbjct: 681 ---------DELPEGLVRSQEEL 694
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 161/361 (44%), Gaps = 13/361 (3%)
Query: 88 LIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
L + ++ TP+L+ TL + L F +L + S T + + D GR + F
Sbjct: 62 LQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQF 121
Query: 148 KAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV-- 205
+ +V+ + P+T + RL+ AG Q + F+ D + RLV
Sbjct: 122 DVVRQLIVEMDQT-SPETFLILVKRLIAAGLTRQAVRAFD----DAPCFLENRRFRLVEF 176
Query: 206 ---VEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++ LC+ GY A + + E D+K+ +LI GWC ++D A++ EM
Sbjct: 177 GFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIES 236
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSE---AEKVLLDMEYNGVPRNVETFNVLISN 319
G E V YN +L+ + + R + AEKV +M G+ +V +F++++
Sbjct: 237 GIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHM 296
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+ ++E + M G P T+ ++K L R+ E +E+++ M +G +
Sbjct: 297 YSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPS 356
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y F G + AM+++ KMK P ++TY++L+ + +++ ++D
Sbjct: 357 SATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWD 416
Query: 440 E 440
+
Sbjct: 417 D 417
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 25/155 (16%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID-- 369
+FN++I L ++R+ + +L M + + TFL+L+K L A + D
Sbjct: 107 SFNLIIDILGRVRQFDVVRQLIVEMDQ----TSPETFLILVKRLIAAGLTRQAVRAFDDA 162
Query: 370 ---------RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
R+ G+ L LC + A+ VF + K + D + Y +
Sbjct: 163 PCFLENRRFRLVEFGF---------LLDTLCKYGYTKMAVGVFNERKEE-FGSDEKVYTI 212
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
L+ WC R+D A E + +G+E Y V
Sbjct: 213 LIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNV 247
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 138/316 (43%), Gaps = 7/316 (2%)
Query: 138 TDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGF 195
D R + F A +VD P++ A R V AG Q + F+ ME G
Sbjct: 127 VDALARARQFDAAWRVVVDASADGAASPRSFAVLARRYVAAGMTRQAVRAFDDMEAFVGR 186
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+ + +++ LC+ Y A ++ + P++K+ +LI GWC + D A++
Sbjct: 187 EANSAEFATLLDTLCKYKYPKVATEIFNKRKYKYNPNEKMYTILIYGWCKVNRNDMARKF 246
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD---SEAEKVLLDMEYNGVPRNVET 312
++M G E V YN +L+ + + +R D AE VL +M G+ +V +
Sbjct: 247 LKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVLKEMRDRGIEPDVTS 306
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+++++ + + E + +F M + G P T+ +IK L R+ + + ++D M
Sbjct: 307 YSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAETLLDEMV 366
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH--NPDSETYDLLMTKWCAHNR 430
+ G Y F G + A+ ++ KMK G PD TY++L+ + NR
Sbjct: 367 AEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILLGMFIKLNR 426
Query: 431 VDKANALFDEAVRNGV 446
++ + + V
Sbjct: 427 HGSVKDIWSDMCESTV 442
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 19/265 (7%)
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
D+ VV+ L A ++V D + + + +L + + G +A R +M
Sbjct: 121 DAYDAVVDALARARQFDAAWRVVVDASADGAASPRSFAVLARRYVAAGMTRQAVRAFDDM 180
Query: 260 YR-GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
G E + + +LD LC+ K P A ++ +Y P N + + +LI
Sbjct: 181 EAFVGREANSAEFATLLD---TLCKYKYP----KVATEIFNKRKYKYNP-NEKMYTILIY 232
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR----------VGEGDEMI 368
CK+ R++ A K M + G PN T+ +L+ + + A V ++++
Sbjct: 233 GWCKVNRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVL 292
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M+ G Y L + E + +F MK G P TY ++ +
Sbjct: 293 KEMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASC 352
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
R++ A L DE V GV P Y
Sbjct: 353 GRLEDAETLLDEMVAEGVCPSPATY 377
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 3/146 (2%)
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+ ++ ++ L + R+ + A ++ G + +F VL + A + D
Sbjct: 121 DAYDAVVDALARARQFDAAWRVVVDASADGA-ASPRSFAVLARRYVAAGMTRQAVRAFDD 179
Query: 371 MKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M++ G ++ L LC + + A +F K K +NP+ + Y +L+ WC N
Sbjct: 180 MEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKRKYK-YNPNEKMYTILIYGWCKVN 238
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRV 455
R D A + + +G+E Y +
Sbjct: 239 RNDMARKFLKDMLDHGIEPNIVTYNI 264
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L R G + F+ ME G K + +V LC+ G + +L+KD
Sbjct: 207 TYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSLVTYNSLVGGLCKAGKWNDGVQLLKD 265
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T+ +I P+ ++LI + +GKL EA L +EM G T+ YN ++D C
Sbjct: 266 MTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMD---GYCM 322
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ RL SEA +L M N ++ TF LI CK++R ++ +KLF ++ + G
Sbjct: 323 QN---RL-SEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVA 378
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +L++ Q+ ++ +E+ M S G Y L LC ++E+A+ +F
Sbjct: 379 NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E ++ N D Y +++ C +V+ A LF GV+ Y V
Sbjct: 439 EDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 490
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 125/264 (47%), Gaps = 9/264 (3%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLI 240
VL F ++ME + G + +L +++ C +A ++ + PD + LI
Sbjct: 84 VLDFCKKMELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 142
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G C++ K+ EA L M G + V YN I V+ +C+ D S A +L
Sbjct: 143 NGLCLESKVSEAVVLVARMVENGCQPNVVTYNSI---VNGICKSGDT----SLALDLLRK 195
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ V +V T++ +I +LC+ + AI LF M G + T+ L+ L +A +
Sbjct: 196 MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGK 255
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+G +++ M S + + ++++A ++++M T G +P++ TY+
Sbjct: 256 WNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNS 315
Query: 421 LMTKWCAHNRVDKANALFDEAVRN 444
LM +C NR+ +AN + D VRN
Sbjct: 316 LMDGYCMQNRLSEANNMLDLMVRN 339
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 9/236 (3%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R + + D +V N T S I + R + + F ++ + G + +
Sbjct: 325 RLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISK-RGLVANTVTY 383
Query: 203 RLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++V+ C++G AE+L ++ + + PD +L+ G C +GKL++A + ++ +
Sbjct: 384 SILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 443
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
L V Y I++ + K + +D + L + GV NV T+ V+IS LC
Sbjct: 444 SKMNLDIVMYTIIIEGMCKGGKVEDAWNL-------FCSLPCKGVKPNVMTYTVMISGLC 496
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
K +A L +M E G PN+ T+ LI++ + + ++I+ MKS G++
Sbjct: 497 KKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 552
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME NG+ N+ T N++I+ C+ ++ A + ++ + G P+ TTF LI L ++
Sbjct: 91 MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E ++ RM G Y + +C A+ + KM D TY
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
++ C +D A +LF E G++ Y
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTY 243
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 118/250 (47%), Gaps = 8/250 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC+ A L + ++ + PD + LI+G C+ D A + EM G
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ Y+ ++D LC ++ RL EA +L +ME +G RN +N LI LCK
Sbjct: 399 CKPDEFTYSILID---SLCYER---RL-KEALMLLKEMESSGCARNAVVYNTLIDGLCKS 451
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR EDA ++F +M G + T+ LI L + RV E +++D+M G K Y
Sbjct: 452 RRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTY 511
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
LT C + IE+A + + M ++G PD TY L+ C RVD A+ L
Sbjct: 512 NSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQM 571
Query: 444 NGVEVKPKEY 453
G+ + P Y
Sbjct: 572 KGIVLTPHAY 581
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDE 251
YG S++++V C+ G A + V + + E F PD + L+ G+C G +++
Sbjct: 222 YGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVND 281
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A + M GF+ YN + +S +C+ + +A ++L M N
Sbjct: 282 ALDIVDFMIEKGFDPDVYTYNSL---ISGMCKLGEF----EKAIEILQQMILRECSPNTV 334
Query: 312 TFNVLISNLCK----------------------------------IRRSED-AIKLFYRM 336
T+N LIS LCK + +++D A+++F M
Sbjct: 335 TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 394
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
GC P+E T+ +LI SL R+ E ++ M+S+G A Y + LC RI
Sbjct: 395 KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRI 454
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
E A +F++M+ G + S TY+ L+ C + RV++A+ L D+ + G +KP ++
Sbjct: 455 EDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG--LKPDKF 509
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 9/304 (2%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+ K + +H +V+ VL T I L +A + + E M ++G K D+ +
Sbjct: 138 KLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA-NHGLKPDEITF 196
Query: 203 RLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ E G + A K+ K + +L+ G+C +G+++EA R E+
Sbjct: 197 TTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSE 256
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
GF V +N + V+ CR + ++A ++ M G +V T+N LIS +C
Sbjct: 257 EGFSPDQVTFNSL---VNGFCRIGNV----NDALDIVDFMIEKGFDPDVYTYNSLISGMC 309
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K+ E AI++ +M C PN T+ LI +L + + ++ + S G
Sbjct: 310 KLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVC 369
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
+ + LC + + AM +FE+MK G PD TY +L+ C R+ +A L E
Sbjct: 370 TFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM 429
Query: 442 VRNG 445
+G
Sbjct: 430 ESSG 433
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 112/259 (43%), Gaps = 8/259 (3%)
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDG 247
+E + GFK D + + + L E+ E L NE I D ++LIK C
Sbjct: 113 LENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAH 172
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
+L A + EM G + + + ++ + ++ + + Y +
Sbjct: 173 QLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM------LGYGCLL 226
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
NV + VL++ CK R E+A++ + E G P++ TF L+ + V + ++
Sbjct: 227 TNV-SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDI 285
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+D M G+ Y ++ +C + E+A+ + ++M +P++ TY+ L++ C
Sbjct: 286 VDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCK 345
Query: 428 HNRVDKANALFDEAVRNGV 446
N ++ A L V G+
Sbjct: 346 ENEIEAATDLARILVSKGL 364
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 10/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G D + ++++ LC+ A ++++ AN + PD+ L++G+ +G L+ A
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 212
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ ++M G L V+ + V+ C++ R++ EA + +L++ G + T
Sbjct: 213 LKMKKQMLGYGCLLTNVSVKVL---VNGFCKEG---RVE-EALRFVLEVSEEGFSPDQVT 265
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN L++ C+I DA+ + M E G P+ T+ LI + + + E++ +M
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y ++ LC IE A + + + G PD T++ L+ C D
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A +F+E G KP E+
Sbjct: 386 IAMEMFEEMKNKG--CKPDEF 404
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 121/263 (46%), Gaps = 9/263 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L + + FE M ++ G K D+ + ++++ LC A L+K+
Sbjct: 370 TFNTLIQGLCLSKNQDIAMEMFEEM-KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKE 428
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + + + LI G C ++++A+ + +M G +V YN ++D LC+
Sbjct: 429 MESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID---GLCK 485
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K R++ EA +++ M G+ + T+N L++ C++ E A + M GC P
Sbjct: 486 NK---RVE-EASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEP 541
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L +A RV +++ ++ G + Y + L +R ++ M +F
Sbjct: 542 DIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLF 601
Query: 404 EKMKTDGHNPDSETYDLLMTKWC 426
+M PD+ T+ ++ C
Sbjct: 602 REMMEKSDPPDALTHKIVFRGLC 624
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ +V TFNVLI LCK + AI + M G P+E TF L++ +
Sbjct: 149 MVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGD 208
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ +M +M G + + C R+E+A+ ++ +G +PD T++
Sbjct: 209 LNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNS 268
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ +C V+ A + D + G +
Sbjct: 269 LVNGFCRIGNVNDALDIVDFMIEKGFD 295
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L ++ +G N TF LI + E+ +K+ E G P+ + + + +L
Sbjct: 77 LLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALV 134
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ ++ + + +M + G + + + LC ++ A+ + E+M G PD
Sbjct: 135 EDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEI 194
Query: 417 TYDLLMTKWCAHNRVDKA 434
T+ LM + ++ A
Sbjct: 195 TFTTLMQGFIEEGDLNGA 212
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 200/487 (41%), Gaps = 52/487 (10%)
Query: 3 PSTSLLLGRLLLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQV 62
P++ LLL R L QP FI S F+ ++N + P +
Sbjct: 11 PNSFLLLNRRLHIQPLPSFIDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFK 70
Query: 63 IARSLSGEL-LENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWL 121
IA S S ++ L+ ++ + + ++ FSH L Q FS A LG+
Sbjct: 71 IAISFSQQMELKGIQPEMFTFNILIN-CFSH------LCQLNFAFSMVAKILKLGYQPDT 123
Query: 122 TQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQ 181
T TL G+ K+ HD ++ + L + + I+ L ++G
Sbjct: 124 V-------TVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRA 176
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCEN-----GYASYAEKLVKDTANEIFPDDKIC 236
L ++E + D +++ C++ Y Y+E +VK +I+P+
Sbjct: 177 ALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK----KIYPNVVTF 232
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK----------- 285
+ LI G+C+ G+L EA L EM +N ++D + K K
Sbjct: 233 NSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIK 292
Query: 286 --------------DPFRLDSEAEK---VLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
D + L E K V + GV NV +++V+I+ LCK + ++
Sbjct: 293 QGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDE 352
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+KLF M PN T+ LI L ++ R+ + ++ID + + G Y L
Sbjct: 353 AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLN 412
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
LC ++++A+++ KMK +G PD TY L+ C + R+ A ++ + + G +
Sbjct: 413 GLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPL 472
Query: 449 KPKEYRV 455
+ Y V
Sbjct: 473 NIRMYTV 479
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 7/224 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ ++I G C + +DEA +L +EM+ TV Y+ ++D + K R D +
Sbjct: 330 VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVW 389
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L E G P N+ T+N L++ LCK + + AI L +M + G P+ +T+
Sbjct: 390 DLIDEINN-------RGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTY 442
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ L + R+ + + + GY + + Y + LC ++A+S+ +M+
Sbjct: 443 TTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMED 502
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+G PD+ TY+ L++ +N+ KA L E + + KE
Sbjct: 503 NGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESDCSGKE 546
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 145/379 (38%), Gaps = 91/379 (24%)
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIH 151
H+ P PS F A+ FNH L N +HT F
Sbjct: 22 HIQPLPS-------FIDNLDDAVSSFNHILHMN---NHTPPIFEF--------------- 56
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE---K 208
K L+S LV+ + F ++ME G + + + +++
Sbjct: 57 -----------NKILSS----LVKMNHFKIAISFSQQMELK-GIQPEMFTFNILINCFSH 100
Query: 209 LCENGYA-SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC+ +A S K++K PD + L++G C++GK+ EA + R F L
Sbjct: 101 LCQLNFAFSMVAKILKLGYQ---PDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLD 157
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V+Y +++ + K + +L + E +LL V +V + +I + CK +
Sbjct: 158 QVSYGTLINGLCKSGETRAALQLLRKIEGLLL------VRPDVIMYTAIIDSFCKDKLVI 211
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
DA L+ M +PN TF LI Y F
Sbjct: 212 DAYDLYSEMIVKKIYPNVVTFNSLI-------------------------------YGF- 239
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C + ++++A+ + +M + NP+ T+++L+ C V KA ++ ++ GVE
Sbjct: 240 ---CIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVE 296
Query: 448 VKPKEYR--VDPRYLKKPI 464
Y +D +L K +
Sbjct: 297 PNVVTYTSLMDGYFLVKEV 315
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 44/208 (21%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S ID L ++GR + V + + + G + + ++ LC+N A L+
Sbjct: 371 TYSSLIDGLCKSGRISDVWDLIDEIN-NRGQPANIITYNSLLNGLCKNHQVDKAIALLTK 429
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+E I PD L+ G C +G+L +A+R+ +++ LC+
Sbjct: 430 MKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDL---------------------LCK 468
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
G P N+ + V+I+ LCK ++A+ L +M + GC P
Sbjct: 469 ---------------------GYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMP 507
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRM 371
+ T+ LI +L++ + G+ +++ M
Sbjct: 508 DAVTYETLISALFKNNKNGKAVKLLREM 535
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 147/321 (45%), Gaps = 14/321 (4%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFE 187
+T S G+++D + + L+ E LG + T CI L RAG+ + F
Sbjct: 228 KTYSALMVALGKKRDSEMVM-VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVD 246
RM+ D G D + ++++ LC G A++L VK AN PD I L+ +
Sbjct: 287 RMD-DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G LD K +M G+ V + ++D LC+ +D EA M G+
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDV---LCKARDF----DEAFATFDVMRKQGI 398
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
N+ T+N LI L + R EDA+KL M G P T++ I ++ G+ E
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVE 458
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++MK+ G L L + R+ +A ++F ++ +G PDS TY+++M +
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518
Query: 427 AHNRVDKANALFDEAVRNGVE 447
+VD+A L E +RNG E
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCE 539
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 12/312 (3%)
Query: 133 TLSFFTDYFGRRKDF-KAIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T + D + +DF +A F V K+ + P T + I L+RAGR L + M
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTM 428
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGK 248
E G + + ++ ++G A E K A I P+ C+ + G+
Sbjct: 429 E-SVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L EAK + + G +V YN ++ C SK+ + EA +L +M NG
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQV-------DEAVNLLSEMIRNGCEP 540
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V N LI +L K R ++A ++F RM + P T+ L+ L + RV + E+
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M + + L C + +E A+ +F KM PD TY+ ++
Sbjct: 601 ESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660
Query: 429 NRVDKANALFDE 440
N+V+ A F +
Sbjct: 661 NKVNHAFWFFHQ 672
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 12/277 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFP 231
L + R F++ + G S ++ +L E Y A L KD N P
Sbjct: 762 LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL--CRKKDPFR 289
D ++L+ GK+ E L +EM + + YN ++ ++K K F
Sbjct: 822 DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
D L+ ++ PR T+ LI L K+ R E+A++LF M ++GC PN F
Sbjct: 882 YD------LVSSDFRPTPR---TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+LI + ++ RM + G K Y + LC R+++A+ F ++K+
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G +PD Y+ ++ R+++A AL++E G+
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+ G+C EA + R M G + Y+ ++ + K + DSE V
Sbjct: 202 LIQSGFC-----GEALEVYRRMVSEGLKPSLKTYSALMVALGK--------KRDSEMVMV 248
Query: 298 LL-DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
LL +ME G+ NV TF + I L + + ++A ++F RM + GC P+ T+ VLI +L
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC 308
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
A ++ E+ +MK+ G+ + Y L + ++ + +M+ DG+ PD
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVV 368
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
T+ +L+ C D+A A FD + G+
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGI 398
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 126/305 (41%), Gaps = 58/305 (19%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV 174
+ +N ++ A ++ D+ L FF D DF+ P+T ID L
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVS--SDFRPT------------PRTYGPLIDGLA 904
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
+ GR + + FE M DYG K + +++ + G A +L K NE I PD
Sbjct: 905 KVGRLEEAMRLFEEMS-DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
K +L+ C+ G++DEA E+ G + +AYN I++ + K R ++ L +E
Sbjct: 964 KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
M G+ ++ T+N L+ NL E A +++ + G P+ T+ LI+
Sbjct: 1024 -------MRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
GY++ E E A +V++ M DG NP
Sbjct: 1077 ---------------------GYSLS--------------ENPEHAYTVYKNMMVDGCNP 1101
Query: 414 DSETY 418
+ TY
Sbjct: 1102 NIGTY 1106
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 150/372 (40%), Gaps = 15/372 (4%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCID 171
L + + +++ HT ET +F ++ + +D A+ +F+ T +
Sbjct: 106 LSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFK 165
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IF 230
L G Q+ +M R GF + S ++ L ++G+ A ++ + +E +
Sbjct: 166 ALSIRGGLRQMTTVLNKM-RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLK 224
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P K L+ + L +EM G + C+ L R ++
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI---CIRVLGRAG---KI 278
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D EA ++ M+ G ++ T+ VLI LC + E+A +LF +M G P++ ++
Sbjct: 279 D-EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ + E +M++ GY + + LC ++A + F+ M+ G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
P+ TY+ L+ R++ A L D GV+ Y Y K + + GK
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGK--SGETGK 455
Query: 471 KRETLPEKMARK 482
ET EKM K
Sbjct: 456 AVETF-EKMKAK 466
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 120/273 (43%), Gaps = 11/273 (4%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDD 233
++G+ T++ ++ M K D + +V+ L ++ A D + F P
Sbjct: 835 KSGKITELFELYKEMISRRC-KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ LI G G+L+EA RL EM G + +N +++ K+ D+E
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIG--------DTE 945
Query: 294 -AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A ++ M G+ +++++ +L+ LC R ++A+ F + G P+ + +I
Sbjct: 946 TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L ++ R+ E + + M++ G Y + L +EQA ++E+++ G
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY+ L+ + + A ++ + +G
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 148/346 (42%), Gaps = 45/346 (13%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDN--KEVLGPK--TLASCIDRLVRAGRPTQVLGFFE 187
+ L++ T +G K+ K H F + K+ + P T+ + + LV+ G+ +G
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQ----IGDAI 701
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC---DLLIKGWC 244
+ RD+ ++ +R V + S+ E L+ T E D I +L++ G C
Sbjct: 702 SIARDFMYQ-----VRFRVNR-------SFWEDLMGGTLVEAEMDKAIIFAEELVLNGIC 749
Query: 245 -VDGKLDEAKRLA----REMY----------RGGFELGTVAYNCILDCVSKLCRKKDPFR 289
D L R+ RE+Y + G +YNC++ + ++
Sbjct: 750 REDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV-------H 802
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+A + DM+ G + TFN+L++ K + + +L+ M C P+ T+
Sbjct: 803 YTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYN 862
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++I SL ++ + + + + S+ + + Y + L + R+E+AM +FE+M
Sbjct: 863 IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G P+ +++L+ + + A LF V G+ K Y +
Sbjct: 923 GCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 134/330 (40%), Gaps = 42/330 (12%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L+D E +G + T + ID ++G + + FE+M+ G + + + L
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK-GIVPNIVACNASLYSL 482
Query: 210 CENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
E G A+ + N + PD ++++K + G++DEA L EM R G E
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD---MEYN----GVPR------------- 308
+ N ++D + K R + +++ + + L + YN G+ +
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602
Query: 309 --------NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
N +FN L+ CK E A+K+F +M C P+ T+ +I L + +
Sbjct: 603 MIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ---AMSVFEK-MKTDGHNPDSE 416
V ++K + + D+ T L G+ + Q A+S+ M +
Sbjct: 663 VNHAFWFFHQLKKSMHP----DHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRS 718
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ LM +DKA +E V NG+
Sbjct: 719 FWEDLMGGTLVEAEMDKAIIFAEELVLNGI 748
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 165/394 (41%), Gaps = 37/394 (9%)
Query: 88 LIFSHVTP-TPSLVQSTLNFSPEAGRAILGFNHWL-TQNANFSHTDETLSFFTDYFGRRK 145
L+ + TP TP+LV S L G L F H+L + + H + D R
Sbjct: 46 LLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLH 105
Query: 146 DFKAIHDFLVDNKEV-LGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+ + + + +GP KT A +R AG+P + + F M ++G +D S
Sbjct: 106 LHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMH-EHGCFQDLASF 164
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ LC++ A +L + D ++++ GWC+ + +A + +EM
Sbjct: 165 NTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 263 GFELGTVAYNCIL----------------------DC---VSKLCRKKDPFRLDSE---A 294
G YN +L DC V F + E A
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
V +M GV +V T+N +I LCK E+A+ +F M G PN TT+ VLI+
Sbjct: 285 RNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG 344
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L+ A G+E++ RM++ G + Y + +E+A+ +FEKM + P+
Sbjct: 345 LFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 404
Query: 415 SETYDLLMTKWCAHNRVDK---ANALFDEAVRNG 445
+TY++L++ R + A L E V G
Sbjct: 405 LDTYNILISGMFVRKRSEDMVVAGKLLLEMVERG 438
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 165/385 (42%), Gaps = 22/385 (5%)
Query: 79 PLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFT 138
P IS L F+ + P+ + +N G F+ LT+ + +++F T
Sbjct: 27 PTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS-ILTKILKMGYEPNSITFTT 85
Query: 139 DYFGRRKDFKA-----IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
G + +A HD +V + L + A ++ L + G + +M R
Sbjct: 86 LIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAM----QMLRKT 141
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
D +++ LC+ + + A +L + A IFP+ +L+ C D K +A
Sbjct: 142 WVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQA 201
Query: 253 KRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
L M + G + V Y I+D C+ K A + M GV NV
Sbjct: 202 MNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNK---------ALNIFNVMVQEGVEPNV 252
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+N++I+ LCK +R ++A+ LF M +P+ T+ +LI L + ++ E++D
Sbjct: 253 WCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDE 312
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+S G + Y L LC ++QA+++ +++K G P+ TY L+ C R
Sbjct: 313 MRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGR 372
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
++ A +F E + G + Y V
Sbjct: 373 LEDAYVIFQEILTEGYHITVWTYNV 397
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 121/289 (41%), Gaps = 9/289 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L + + Q + M + G K + + +++ C + A +
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKK-GVKPNVVTYGAIMDGYCLVNQVNKALNIFNV 242
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E + P+ +++I G C ++DEA L +EM+ V YN ++D + KL +
Sbjct: 243 MVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGK 302
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
L E + G ++ T+N L+ LCK + AI L + + G P
Sbjct: 303 ISTSLELVDEMRSI-------GKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQP 355
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L + R+ + + + + GY I Y + LC ++A+++
Sbjct: 356 NVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALL 415
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+M+ + PD+ +Y+ ++ K N L + G+ + K+
Sbjct: 416 SRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKK 464
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 162/370 (43%), Gaps = 17/370 (4%)
Query: 76 EADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLS 135
++P ++Q LH + TP LV + L G L F + L+ + ++SH +
Sbjct: 48 SSNPQALAQTLH--SPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYD 105
Query: 136 FFTDYFGRRKDFKAIHDFLVDNKEV-LGP--KTLASCIDRLVRAGRPTQVLGFFERMERD 192
D R +D ++ + + LGP KT A +R AG+P + + F M +
Sbjct: 106 HAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQ- 164
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
+G +D S +++ LC++ A L K + D ++++ GWC+ + ++A
Sbjct: 165 FGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKA 224
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD--SEAEKVLLDMEYNGVPRNV 310
+ +EM + G +YN +L K FR +EA L+M+ +V
Sbjct: 225 LEMLKEMVKRGLTPNLTSYNTML---------KGYFRAGQINEAWDFFLEMKKRDCEIDV 275
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ +I + A K+F M + G P+ T+ I+ L + V + +
Sbjct: 276 ITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEE 335
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M GY Y + LC +E+AM +MK DG P+ +TY+L++ +C
Sbjct: 336 MVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGE 395
Query: 431 VDKANALFDE 440
+DKA LF +
Sbjct: 396 IDKALDLFQK 405
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 206 VEKLC-----ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC +N + E +VK P+ +L+I+G C G+++ A M
Sbjct: 317 IQVLCKKDNVDNAIVIFEEMVVKGYV----PNSITYNLVIRGLCHRGEMERAMEFMGRMK 372
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G E YN + + C D +D +A + M N++T+N+LIS +
Sbjct: 373 DDGCEPNVQTYNLV---IRYFC---DEGEID-KALDLFQKMTSGDCLPNLDTYNILISAM 425
Query: 321 CKIRRSED---AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
++S+D A L M + G P + TF ++ L G E++ R++S
Sbjct: 426 FVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEIL-RLQS 480
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 150/324 (46%), Gaps = 27/324 (8%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI 235
AGR + FF+ M+ G + D +S +++ L ++G + A L +A PD
Sbjct: 108 AGRAIE---FFKEMKAS-GVEPDLESYHILLSALSDSGRMAEAHALF--SAMTCSPDIMT 161
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
++L+ G+C G+ EA+ L +E+ + G+E Y+ I++C KL + + EA
Sbjct: 162 YNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVE-------EAW 214
Query: 296 KVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+V + M E N VP N TFN LI+ CK EDAIKLF M + GC T+ LI S
Sbjct: 215 EVFMKMIESNCVP-NAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDS 273
Query: 355 LYQA-ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L + V ++ ++++ AG Y + ER + + M +G P
Sbjct: 274 LCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFS--ERANDGLRLLCHMHAEGCKP 331
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG--KK 471
D TY+ L++ C+ NRV+ A LF NG+ P + +L + + +K +
Sbjct: 332 DVITYNCLISGLCSANRVEDAQRLF-----NGMACAPNVTTFN--FLIRGLCAQKKVEEA 384
Query: 472 RETLPEKMARKRRRLKQIRLSFVK 495
R L A I L+F K
Sbjct: 385 RNILDRMTAPDMTTFNTIILAFCK 408
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 117/260 (45%), Gaps = 14/260 (5%)
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAK 253
F + + +++ C+ G A + D ++ + P+ + L+ G C G++ A
Sbjct: 21 FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 80
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+L REM G F + ++N +L F + A + +M+ +GV ++E++
Sbjct: 81 KLFREMQAGPFLPTSASHNILLR----------GFFMAGRAIEFFKEMKASGVEPDLESY 130
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
++L+S L R +A LF M C P+ T+ VL+ + + E ++ +
Sbjct: 131 HILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 187
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
AGY Y + C ++++E+A VF KM P++ T++ L+ +C ++
Sbjct: 188 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 247
Query: 434 ANALFDEAVRNGVEVKPKEY 453
A LF E + G + Y
Sbjct: 248 AIKLFAEMEKIGCKATIVTY 267
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K D+A RL +E+ G F YN + + C+ +A V DM+ +G+
Sbjct: 5 KHDQALRLFKEVLAGLFAPNAHTYNVL---IRGFCKGGQM----HQAVSVFSDMKSSGLL 57
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N T N L+ LC+I + A+KLF M P + +L++ + A R E
Sbjct: 58 PNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEF 114
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
MK++G + Y+ L+ L R+ +A ++F M +PD TY++LM +C
Sbjct: 115 FKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCK 171
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ +A +L E ++ G E Y +
Sbjct: 172 IGQTYEAQSLMKEILKAGYEPNVFTYSI 199
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 40/229 (17%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E +K + P+ + LI G+C G L++A +L EM + G + V YN ++D
Sbjct: 215 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID-- 272
Query: 279 SKLCRKK-------DPF-RLD----------------------SEAEKVLLDMEYNGVPR 308
LC+K+ D F +L+ ++ ++L M G
Sbjct: 273 -SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKP 331
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+N LIS LC R EDA +LF M C PN TTF LI+ L +V E ++
Sbjct: 332 DVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNIL 388
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
DRM A + + C + A V + M G P++ T
Sbjct: 389 DRMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYT 433
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 158/369 (42%), Gaps = 34/369 (9%)
Query: 88 LIFSHVTP-TPSLVQSTLNFSPEAGRAILGFNHWL-TQNANFSHTDETLSFFTDYFGRRK 145
L+ + TP TP+LV S L G L F H+L + + H + D R
Sbjct: 46 LLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLH 105
Query: 146 DFKAIHDFLVDNKEV-LGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+ + + + +GP KT A +R AG+P + + F M ++G +D S
Sbjct: 106 LHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMH-EHGCFQDLASF 164
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ LC++ A +L + D ++++ GWC+ + +A + +EM
Sbjct: 165 NTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 263 GFELGTVAYNCIL----------------------DC---VSKLCRKKDPFRLDSE---A 294
G YN +L DC V F + E A
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
V +M GV +V T+N +I LCK E+A+ +F M G PN TT+ VLI+
Sbjct: 285 RNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG 344
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L+ A G+E++ RM++ G + Y + +E+A+ +FEKM + P+
Sbjct: 345 LFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 404
Query: 415 SETYDLLMT 423
+TY++L++
Sbjct: 405 LDTYNILIS 413
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE-KLVK 223
T + + RAG+ FF M+ KRD + + +V +G+ E K +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMK-----KRDCE-IDVVTYTTVVHGFGVAGEIKRAR 285
Query: 224 DTANE-----IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+ +E + P + +I+ C ++ A + EM R G+E YN ++
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI--- 342
Query: 279 SKLCRKKDPFRLD--SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ F S E+++ ME G N +T+N++I + E A+ LF +M
Sbjct: 343 ------RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Query: 337 GEWGCHPNETTFLVLIKSLYQAAR 360
G C PN T+ +LI ++ R
Sbjct: 397 GSGDCLPNLDTYNILISGMFVRKR 420
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 147/321 (45%), Gaps = 14/321 (4%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFE 187
+T S G+++D + + L+ E LG + T CI L RAG+ + F
Sbjct: 228 KTYSALMVALGKKRDSEMVM-VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVD 246
RM+ D G D + ++++ LC G A++L VK AN PD I L+ +
Sbjct: 287 RMD-DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G LD K +M G+ V + ++D LC+ +D EA M G+
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDV---LCKARDF----DEAFATFDVMRKQGI 398
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
N+ T+N LI L + R EDA+KL M G P T+ + I ++ G+ E
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVE 458
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++MK+ G L L + R+ +A ++F ++ +G PDS TY+++M +
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518
Query: 427 AHNRVDKANALFDEAVRNGVE 447
+VD+A L E +RNG E
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCE 539
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 12/312 (3%)
Query: 133 TLSFFTDYFGRRKDF-KAIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T + D + +DF +A F V K+ + P T + I L+RAGR L M
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM 428
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGK 248
E G + + + ++ ++G A E K A I P+ C+ + G+
Sbjct: 429 E-SVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L EAK + + G +V YN ++ C SK+ + EA +L +M NG
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQV-------DEAVNLLSEMIRNGCEP 540
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V N LI +L K R ++A ++F RM + P T+ L+ L + RV + E+
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M + + L C + +E A+ +F KM PD TY+ ++
Sbjct: 601 ESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660
Query: 429 NRVDKANALFDE 440
N+V+ A F +
Sbjct: 661 NKVNHAFWFFHQ 672
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 12/277 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFP 231
L + R F++ + G S ++ +L E Y A L KD N P
Sbjct: 762 LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL--CRKKDPFR 289
D ++L+ GK+ E L +EM + + YN ++ ++K K F
Sbjct: 822 DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
D L+ ++ PR T+ LI L K+ R E+A++LF M ++GC PN F
Sbjct: 882 YD------LVSSDFRPTPR---TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+LI + ++ RM + G K Y + LC R+++A+ F ++K+
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G +PD Y+ ++ R+++A AL++E G+
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+ G+C EA + R M G + Y+ ++ + K + DSE V
Sbjct: 202 LIQSGFC-----GEALEVYRRMVSEGLKPSLKTYSALMVALGK--------KRDSEMVMV 248
Query: 298 LL-DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
LL +ME G+ NV TF + I L + + ++A ++F RM + GC P+ T+ VLI +L
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC 308
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
A ++ E+ +MK+ G+ + Y L + ++ + +M+ DG+ PD
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVV 368
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
T+ +L+ C D+A A FD + G+
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGI 398
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 126/305 (41%), Gaps = 58/305 (19%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV 174
+ +N ++ A ++ D+ L FF D DF+ P+T ID L
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVS--SDFRPT------------PRTYGPLIDGLA 904
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
+ GR + + FE M DYG K + +++ + G A +L K NE I PD
Sbjct: 905 KVGRLEEAMRLFEEMS-DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
K +L+ C+ G++DEA E+ G + +AYN I++ + K R ++ L +E
Sbjct: 964 KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
M G+ ++ T+N L+ NL E A +++ + G P+ T+ LI+
Sbjct: 1024 -------MRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
GY++ E E A +V++ M DG NP
Sbjct: 1077 ---------------------GYSLS--------------ENPEHAYTVYKNMMVDGCNP 1101
Query: 414 DSETY 418
+ TY
Sbjct: 1102 NIGTY 1106
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 150/372 (40%), Gaps = 15/372 (4%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCID 171
L + + +++ HT ET +F ++ + +D A+ +F+ T +
Sbjct: 106 LSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFK 165
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IF 230
L G Q+ +M R GF + S ++ L ++G+ A ++ + +E +
Sbjct: 166 ALSIRGGLRQMTTVLNKM-RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLK 224
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P K L+ + L +EM G + C+ L R ++
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI---CIRVLGRAG---KI 278
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D EA ++ M+ G ++ T+ VLI LC + E+A +LF +M G P++ ++
Sbjct: 279 D-EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ + E +M++ GY + + LC ++A + F+ M+ G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
P+ TY+ L+ R++ A L GV+ Y + Y K + + GK
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGK--SGETGK 455
Query: 471 KRETLPEKMARK 482
ET EKM K
Sbjct: 456 AVETF-EKMKAK 466
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 120/273 (43%), Gaps = 11/273 (4%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDD 233
++G+ T++ ++ M K D + +V+ L ++ A D + F P
Sbjct: 835 KSGKITELFELYKEMISRRC-KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ LI G G+L+EA RL EM G + +N +++ K+ D+E
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIG--------DTE 945
Query: 294 -AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A ++ M G+ +++++ +L+ LC R ++A+ F + G P+ + +I
Sbjct: 946 TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L ++ R+ E + + M++ G Y + L +EQA ++E+++ G
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY+ L+ + + A ++ + +G
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 133/326 (40%), Gaps = 22/326 (6%)
Query: 130 TDETLSFFTDYFGRRKDF-KAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFF 186
T T + F DYFG+ + KA+ F + + P +A + + L GR + F
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCV 245
+ R+ G D + ++++ + G A L+ + N PD + + LI
Sbjct: 496 NGL-RENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-DSEAEKVLLDMEYN 304
G++DEA ++ M V YN +L + K R + L +S EK
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEK-------- 606
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
N +FN L+ CK E A+K+F +M C P+ T+ +I L + +V
Sbjct: 607 KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ---AMSVF-EKMKTDGHNPDSETYDL 420
++K + + D+ T L G+ + Q A+S+ + M + ++
Sbjct: 667 FWFFHQLKKSMHP----DHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWED 722
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
LM +DKA +E V NG+
Sbjct: 723 LMGGTLVEAEMDKAIIFAEELVLNGI 748
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 148/346 (42%), Gaps = 45/346 (13%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDN--KEVLGPK--TLASCIDRLVRAGRPTQVLGFFE 187
+ L++ T +G K+ K H F + K+ + P T+ + + LV+ G+ +G
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQ----IGDAI 701
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC---DLLIKGWC 244
+ RD+ ++ +R V + S+ E L+ T E D I +L++ G C
Sbjct: 702 SIARDFMYQ-----VRFRVNR-------SFWEDLMGGTLVEAEMDKAIIFAEELVLNGIC 749
Query: 245 -VDGKLDEAKRL----AREMY----------RGGFELGTVAYNCILDCVSKLCRKKDPFR 289
D L R+ RE+Y + G +YNC++ + ++
Sbjct: 750 REDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV-------H 802
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+A + DM+ G + TFN+L++ K + + +L+ M C P+ T+
Sbjct: 803 YTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYN 862
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++I SL ++ + + + + S+ + + Y + L + R+E+AM +FE+M
Sbjct: 863 IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G P+ +++L+ + + A LF V G+ K Y +
Sbjct: 923 GCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 133/294 (45%), Gaps = 9/294 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V+N + T + + L R G + + M R+ G + DK S ++ LC+ G
Sbjct: 222 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM-RERGLQPDKFSYDTLMAGLCKTG 280
Query: 214 YASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A K+ +D +N P D + LI G C G+LDEA +L +M E V +
Sbjct: 281 KIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFT 340
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++D LC+ RL EA++VL ME NV T++ LI LCK + DA ++
Sbjct: 341 ALMD---GLCKGD---RL-QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 393
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F RM G PN T+ LI V +++ M + G Y + LC
Sbjct: 394 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK 453
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
R +A +F MK NPD TY L+ +C R+D A LFD+ ++ V
Sbjct: 454 TGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV 507
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 132/308 (42%), Gaps = 36/308 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L +A R + +F +M++ G ++ + +++ C+ A L+K+
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKK-GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR----- 283
+ P+ +I G+C K+D A +L R+M G V YN +L S LCR
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL---SGLCRNGLMD 248
Query: 284 --------------KKDPFRLDS------------EAEKVLLDMEYNGVPRNVETFNVLI 317
+ D F D+ A KV D P +V ++ LI
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ LCK R ++A KLF +M E C P+ TF L+ L + R+ E ++++ M+
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + LC ++ A VF++M G P+ TY+ L+ +C N VD A L
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428
Query: 438 FDEAVRNG 445
+E G
Sbjct: 429 MEEMTATG 436
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 139/338 (41%), Gaps = 13/338 (3%)
Query: 113 AILGFNHWLTQNANFSHTDETLS-FFTDYFGRRKDFKAIHDFLVDNKEVLGPK--TLASC 169
A L F HW ++ F H T + F R+ + H + P T A
Sbjct: 6 AALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVV 65
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L ++G + E M R+ G D V+ LC+ + A + E
Sbjct: 66 IQGLCKSGDLDKACELLEEM-RESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE- 123
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
+ ++I G C +L EA +M + G YN +++ K+ + +
Sbjct: 124 -KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 182
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
L L +M+ +G+ NV T++ +I C+ + + A KLF +M E GC PN T+
Sbjct: 183 L-------LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 235
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
L+ L + + E E++D M+ G K Y + LC +I+ A+ VFE
Sbjct: 236 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PD Y L+ C R+D+A LF++ N E
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCE 333
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 10/250 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + +VE C G AE+L+++ A++ PD L+ G+C G++ EA+R+
Sbjct: 510 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 569
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M + G + V Y ++D CR P + A ++L +M NGV NV T+ L
Sbjct: 570 KRMAKRGCQPNVVTYTALID---AFCRAGKP----TVAYRLLEEMVGNGVQPNVITYRSL 622
Query: 317 ISNLCKIRRSEDAIKLFYRMG-EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
I C E+A K+ R+ + C + + V++ L + R+ E+++ +K +G
Sbjct: 623 IGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 682
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK-TDGHNPDSETYDLLMTKWCAHNRVDKA 434
Y + LC + + +AM V E+M + P++E Y+ ++ + R ++A
Sbjct: 683 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 742
Query: 435 NALFDEAVRN 444
NAL DE + N
Sbjct: 743 NALADELLGN 752
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 9/291 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L + R + E ME D + + +++ LC+ G A+++ K
Sbjct: 338 TFTALMDGLCKGDRLQEAQQVLETME-DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 396
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I P+ + LI G+C+ +D A L EM G + YN ++D + K R
Sbjct: 397 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
EA ++ DM+ +V T++ LI CK+ R + A LF M + P
Sbjct: 457 A-------PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP 509
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF L++ A V + + +++ M ++ + Y + C + R+ +A V
Sbjct: 510 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 569
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
++M G P+ TY L+ +C + A L +E V NGV+ YR
Sbjct: 570 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 142/352 (40%), Gaps = 36/352 (10%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVK 223
T +S ID L + G+ F+RM G + + + ++ C NG S + +
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIV-RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 431
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
TA PD + LI G C G+ EA RL +M + Y+C++ KL
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL-E 490
Query: 284 KKDPFR-----------------------------LDSEAEKVLLDMEYNGVPRNVETFN 314
+ D R L +AE++L +M + +V T+
Sbjct: 491 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L+ CK+ R +A ++ RM + GC PN T+ LI + +A + +++ M
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNRVDK 433
G Y + CG +E+A + E+++ D + D Y ++M C R+
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670
Query: 434 ANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPE-KMARKRR 484
A L + ++G + Y R L + + GK E L E ++RK R
Sbjct: 671 ALELLEAIKQSGTPPRHDIYVALIRGLCQ--GKELGKAMEVLEEMTLSRKSR 720
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 161/383 (42%), Gaps = 20/383 (5%)
Query: 82 ISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAI-----LGFNHWLTQNANFSHTDETLSF 136
+S L I + + +P++V+ + S I L F +W T F H+ + +
Sbjct: 94 LSNDLSQISAPHSVSPAVVRYVIEKSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNE 153
Query: 137 FTDYFGRRKDFKAIHDFLVD-----NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMER 191
D G+ K F + +L+D N E+ T + + R VRAG + + F RME
Sbjct: 154 MIDLAGKVKQF-GLAWYLIDLMKARNVEI-TVVTFSMLVRRYVRAGLAAEAVHAFNRME- 210
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDE 251
DYG D + V+ LC+ A A+ + ++ PD + L+ GWC G + E
Sbjct: 211 DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISE 270
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A+ + REM G Y+ ++D LCR R A V +M G N
Sbjct: 271 AESVFREMKMAGISPNVYTYSIVIDA---LCRSGQITR----AHDVFAEMLDAGCNPNSV 323
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
TFN LI + R+E ++++ +M C + T+ LI++ + +GE ++++ M
Sbjct: 324 TFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSM 383
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ + + + A +F +MK G P++ TY++LM +
Sbjct: 384 AKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSA 443
Query: 432 DKANALFDEAVRNGVEVKPKEYR 454
D L E VE YR
Sbjct: 444 DMIFKLKKEMDEEEVEPNFNTYR 466
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 13/258 (5%)
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQ 181
A S T S D R HD + + P T + I +RAGR +
Sbjct: 281 AGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEK 340
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLI 240
VL + +M+R D + ++E C++ A K++ A N+ P+ + +
Sbjct: 341 VLQVYNQMKR-LRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIF 399
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
+ ++ A R+ M G + TV YN ++ + F+L E
Sbjct: 400 RCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKE------- 452
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC-HPNETTFLVLIKSLYQAA 359
M+ V N T+ LI+ C + A F M + C P+ + ++++ L +A
Sbjct: 453 MDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAG 512
Query: 360 RVGEGDEMIDRMKSAGYA 377
++ + +E++D+M G+A
Sbjct: 513 QLKKHEELVDKMVERGFA 530
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 17/286 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMER---------DYGFKRDKDSLRLVVEKLCENGYASYAEK 220
+D L + GR + FE M+ D G + D + ++++ LC+ G A+K
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 281
Query: 221 LVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L+ I PD + LI+G+C+ G L+ A+ L M G E ++YN +++ S
Sbjct: 282 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 341
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K + ++ +L +E M G NV T++ L+ + + +DA KLF M
Sbjct: 342 KTLKVEEAMKLYNE-------MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 394
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G N T+ + + L + + E ++ +KS+ + + ++ + LC ++E A
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 454
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+FEK+ +GH P+ TY +++ +C +VDKAN L + NG
Sbjct: 455 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 21/291 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-----NGYASYAEKLVKD 224
+ L + +QV + +M R G D+ +L +++ LC G+A++A L +
Sbjct: 76 LSGLAKIKHYSQVFSLYNQM-RLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRG 134
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ P+ + LIKG C++ ++ EA RL M + G V Y ++ +
Sbjct: 135 YS----PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNI 190
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+L E + E N P NV T+N+++ LCK+ R ++A +LF M G PN
Sbjct: 191 NIALKLHQEMLNDISRYEINCKP-NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPN 249
Query: 345 E----------TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
E TF VLI +L + +V E +++ M +G Y + C +
Sbjct: 250 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 309
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ A +F M + G PD +Y++L+ + +V++A L++E + G
Sbjct: 310 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVG 360
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
++N +L ++K+ F L ++ M +G+ + T N+L++ LC + R +
Sbjct: 71 SFNHLLSGLAKIKHYSQVFSLYNQ-------MRLSGLSSDRCTLNILLNCLCNVNRLREG 123
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
F + G PN T+ LIK L R+ E + RM+ G Y +
Sbjct: 124 FAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKG 183
Query: 390 LCGIERIEQAMSVFEKMKTD------GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
LCG I A+ + ++M D P+ TY++++ C R D+A LF+E
Sbjct: 184 LCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKT 243
Query: 444 NGV 446
G+
Sbjct: 244 QGM 246
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++ +FN L+S L KI+ L+ +M G + T +L+ L R+ EG
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ GY+ Y + LC RI +A +F +M+ G PD TY L+ C
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
++ A L E + ++ E P + I V
Sbjct: 188 GNINIALKLHQEMLN---DISRYEINCKPNVITYNIIV 222
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 9/207 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + + AG+ F M + +G + + + ++ LC+N A KL +
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVM-KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 425
Query: 225 TANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ F + + + LI G C GKL+ A L ++ G E V Y + + CR
Sbjct: 426 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM---IHGFCR 482
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +A ++ ME NG ++ T+N L+ + + E+ ++L +RM + P
Sbjct: 483 EGQV----DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 538
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDR 370
+ T +++ L + + E ++ R
Sbjct: 539 DAITCSIVVDMLSKDEKYQECLHLLPR 565
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 52/110 (47%)
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+ F+ M P+ ++F L+ L + + + ++M+ +G + + L
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LC + R+ + + F + G++P+ TY+ L+ C +R+ +A LF
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 142/315 (45%), Gaps = 9/315 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR ++ ++ D +++ T +D + G+ LG F M+R GF+ +
Sbjct: 149 GRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR-RGFQPSVVT 207
Query: 202 LRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++++ LC G A KL K T + PD L+ G G+++EA ++ REM
Sbjct: 208 YNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMV 267
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G + V YN +L ++K ++L E M G + +FN ++ L
Sbjct: 268 DRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKE-------MSRKGFHPDAFSFNTIMDAL 320
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K + + A ++F RM E GC P+ ++ +LI S + + +M++ M AG+
Sbjct: 321 GKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPET 380
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
K Y + L ++++A +V E+M+T G PD TY+ LM +A LF +
Sbjct: 381 KTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQ 440
Query: 441 AVRNGVEVKPKEYRV 455
GVE Y V
Sbjct: 441 MKDKGVEPDTLSYAV 455
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDY------GFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
ID LV +G FER E Y G + D+ + +++ +G
Sbjct: 72 IDILVNSGE-------FERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQL-------- 116
Query: 224 DTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
D+A E+F PD+ L+ G++ EA+ M G YN +
Sbjct: 117 DSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLL 176
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+D K+ + LD A + +M+ G +V T+N+L+ LC R A KLF+
Sbjct: 177 MDAFRKVGQ------LDM-ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFH 229
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+M GC P+ T+ L+ L ++ RV E ++ M G A+ +Y L L
Sbjct: 230 KMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG 289
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+++ + ++M G +PD+ +++ +M N+ D A +F V +G
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 9/193 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ +D L +A +P F RM + G K D S ++++ G A+ A +++++
Sbjct: 315 TIMDALGKANKPDAAREVFARMV-ESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373
Query: 228 EIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
F P+ K + LI DG++DEA + EM G V YN ++D + K +
Sbjct: 374 AGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ- 432
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
A ++ M+ GV + ++ V I L R ++A+ LF M GC ++
Sbjct: 433 ------RAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKA 486
Query: 347 TFLVLIKSLYQAA 359
+ +LI++ ++A
Sbjct: 487 MYRILIRAAHRAG 499
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%)
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
E +L +M G P T LI+ + +S DA LF + + C P F LI
Sbjct: 15 ETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDI 74
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + + + ++ G + + Y + +++ AM +F +MK G PD
Sbjct: 75 LVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPD 134
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
TY L+ RV +A + FD + G+
Sbjct: 135 EYTYGFLVNALGKAGRVQEARSFFDAMLERGL 166
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 10/218 (4%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+++ W G LD + L +EM G L ++ + + D F L ++AE
Sbjct: 3 VVLASW---GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESF 59
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
V F LI L E A ++ ++ + GC + + VLI+ +
Sbjct: 60 -------ACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGR 112
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ ++ EM MK G + Y + L R+++A S F+ M G P+ T
Sbjct: 113 SGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPT 172
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y+LLM + ++D A LF E R G + Y +
Sbjct: 173 YNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 159/358 (44%), Gaps = 12/358 (3%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V +P LV L AG L F W + FS+T E + G+ K F+ +
Sbjct: 123 VAVSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFRLVWS 182
Query: 153 FL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ + + +L T + R RA + + + FE+M +G K + +++ L
Sbjct: 183 LVETMRCRGLLSKDTFKLIVRRYARARKVKEAVETFEKMS-IFGLKTELSDYNWLIDTLS 241
Query: 211 ENGYASYAEKLVKDTA--NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
++ A+ + K+ + PD K +L++GW + L K + +EM G
Sbjct: 242 KSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDV 301
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
VAY + +S C+ + D EA KV +ME +G + + +LI+ L R ++
Sbjct: 302 VAYGML---ISAFCKSG---KCD-EAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDE 354
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+K F + G T ++ + +A++ +M+D M+ + Y L
Sbjct: 355 ALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILH 414
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L ++ E+A ++F++M DG P TY +++ +C++ RVD A ++ + GV
Sbjct: 415 YLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGV 472
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 10/255 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLD 250
D G + D + +++ C++G A K+ + A+ P + +LI G + +LD
Sbjct: 294 DAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLD 353
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA + + GF + N ++ + + + F++ E K V N
Sbjct: 354 EALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKC-------KVGPNS 406
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T++V++ L K ++ E+A +F RMG GC P T+ +++ RV ++ +
Sbjct: 407 RTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQ 466
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G + + LC R+E+A F++M G P + + L R
Sbjct: 467 MGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGGR 526
Query: 431 VDKAN--ALFDEAVR 443
+ A AL +A+R
Sbjct: 527 ISLAQEVALKLDAIR 541
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID L + GR L FF ME G K + + ++ C G +L++D +
Sbjct: 272 IDNLCKDGRLDDALSFFSEMETK-GIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ LI +GKL EAK L EM G E T+ YN + + LC K
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSL---IYGLCNDK--- 384
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RLD EA +++ M G ++ T+N+LI+ CK ++ +D ++LF +M G + T+
Sbjct: 385 RLD-EANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI+ Q+ ++ ++ M S G G Y L LC +E+A+ + ++M
Sbjct: 444 STLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D Y++++ C N+VD A +LF GV+ + Y +
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNI 550
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 9/315 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + + D +V ++ V TL + ++ L R ++ + RM + G + ++ +
Sbjct: 174 GRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMAN-GCQPNQFT 232
Query: 202 LRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ ++C++G + A L++ + +I P ++I C DG+LD+A EM
Sbjct: 233 YGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEME 292
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G + YN ++ R D ++L DM + NV TF+ LI +L
Sbjct: 293 TKGIKANVFTYNSLIGSFCSFGRWDD-------GAQLLRDMITRKITPNVVTFSALIDSL 345
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K + +A L+ M G PN T+ LI L R+ E ++M+D M S G
Sbjct: 346 VKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDI 405
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++++ M +F KM G D+ TY L+ +C ++ A +F E
Sbjct: 406 WTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQE 465
Query: 441 AVRNGVEVKPKEYRV 455
V GV Y +
Sbjct: 466 MVSQGVHPGIMTYAI 480
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 132/296 (44%), Gaps = 17/296 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-----YASYAE 219
T ++R+ ++G L +ME K + ++++ LC++G + ++E
Sbjct: 232 TYGPILNRMCKSGNTASALDLLRKMEH-RKIKPHVVTYTIIIDNLCKDGRLDDALSFFSE 290
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
K +F + LI +C G+ D+ +L R+M V ++ ++D +
Sbjct: 291 METKGIKANVFTYNS----LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLV 346
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K + +EA+ + +M G+ N T+N LI LC +R ++A ++ M
Sbjct: 347 KEGKL-------TEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSK 399
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
GC P+ T+ +LI +A +V +G + +M G Y + C ++ A
Sbjct: 400 GCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVA 459
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
VF++M + G +P TY +L+ C + +++A + D+ + +E+ Y +
Sbjct: 460 KKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNI 515
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G D + +++ C++ A+K+ ++ ++ + P +L+ G C +G+L+EA
Sbjct: 435 GMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEA 494
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ +M++ EL YN I + +C ++D +A + + GV R++++
Sbjct: 495 LGILDQMHKCKMELDIGIYNII---IHGMCNAN---KVD-DAWSLFCSLPSKGVKRDIQS 547
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N+++S LCK +A LF +M E G P+ T+ LI++ + + ++I+ MK
Sbjct: 548 YNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMK 607
Query: 373 SAGYA 377
G++
Sbjct: 608 RCGFS 612
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 13/284 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN---GYASYAEKLVKDTANEI 229
L R + VL ++ME G D +L +++ C G+A A + E
Sbjct: 100 LARTKQYDLVLALCKQMELK-GIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYE- 157
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P+ + L+ G C++G++ EA L M + N I V+ LC K
Sbjct: 158 -PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTI---VNGLCLKDRV-- 211
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
SEA ++ M NG N T+ +++ +CK + A+ L +M P+ T+
Sbjct: 212 --SEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYT 269
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++I +L + R+ + M++ G Y + C R + + M T
Sbjct: 270 IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR 329
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ T+ L+ ++ +A L++E + G+E Y
Sbjct: 330 KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITY 373
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 168/381 (44%), Gaps = 18/381 (4%)
Query: 70 ELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSH 129
++L++ AD +S L H+ ++ + L + L F +W ++H
Sbjct: 93 KVLKSTSADNADLSDALRRFAVHMDE--DIILTVLQKQRSNWQVALAFFNWAATLPGYAH 150
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKE-----VLGPKTLASCIDRLVRAGRPTQVLG 184
+ D GR K + + + E V+ K A ++R A + + +
Sbjct: 151 GSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLNRYAGAHKVQEAIE 210
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWC 244
F + +DYGF+ D ++++ LC + AE L ++ +E K ++++ GWC
Sbjct: 211 VF-YLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWC 269
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
V G L +A+R+ ++ E Y ++ ++K R S A K+ M
Sbjct: 270 VKGSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRI-------SAAVKLFKKMWET 322
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ +V N +I LC R +A+++F M + C + T+ LIK L + R+ +
Sbjct: 323 GINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRMEKV 382
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E++D M++ G + + Y L E+ + +++ ++M+ G DS+TY+L++
Sbjct: 383 YELLDDMEAKGCSPNNRTYSYVLK---TTEKPKDVIALMQRMEQTGCELDSDTYNLILNL 439
Query: 425 WCAHNRVDKANALFDEAVRNG 445
+ ++DE RNG
Sbjct: 440 YTNWKYEKGVQQVWDEMERNG 460
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 90/234 (38%), Gaps = 39/234 (16%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G+ G+ AY +LD + ++ + + +L E + E V + F VL++
Sbjct: 147 GYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPE-----ERRVVVVTNKMFAVLLNRYAG 201
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA-------- 374
+ ++AI++FY ++G + F +L+ SL + V E + + K
Sbjct: 202 AHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSW 261
Query: 375 -----GYAIGKK---------------------DYYEFLTRLCGIERIEQAMSVFEKMKT 408
G+ + Y F+ L RI A+ +F+KM
Sbjct: 262 NIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKKMWE 321
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
G NPD + ++ + C NR+ +A +F E + Y +YL K
Sbjct: 322 TGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCK 375
>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
Length = 503
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 153/332 (46%), Gaps = 12/332 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWL-TQNANFSHTDETLSFFTDYFGRRKDFKA 149
S V T + S L + + LGF W ++ +SHT S D G+ +
Sbjct: 78 SEVRLTSGVADSLLRGCGDCWKPALGFFLWAQSRGGGYSHTPYACSRMVDLLGKTRQIDR 137
Query: 150 IHDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
+ D L + + ++ T+A I RL A + + F+++E D G +R+ +++ ++++
Sbjct: 138 MWDLLSEMHCRGLVTVDTVAKSIRRLAAARKWRDAILLFDQLE-DLGLERNTETMNVLLD 196
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC+ A ++ + I PD ++ + GWC ++DEA EM GF
Sbjct: 197 ALCKEKKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSVRRIDEALWTIEEMKTRGFPPI 256
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ Y +L+ C++++ FR +VL M G NV T+ +++++L K R E
Sbjct: 257 VITYTAVLE---AYCKQRN-FR---RVYEVLDSMGSQGCHPNVITYTMIMTSLTKCERFE 309
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID-RMKSAGYAIGKKDYYEF 386
+A+ + RM GC P+ + LI L +A + E +++ M G Y
Sbjct: 310 EALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEMPRNGVLRNVATYNTM 369
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ LC R + A+ V ++M+ PD +TY
Sbjct: 370 ISILCQYGRDDDALGVLKEMEAQSCKPDLQTY 401
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G E T N +LD LC++K E + + M + + TFN+ + C
Sbjct: 183 GLERNTETMNVLLD---ALCKEKK-----VELAREVFVMLSPHIAPDAYTFNIFVHGWCS 234
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+RR ++A+ M G P T+ ++++ + E++D M S G
Sbjct: 235 VRRIDEALWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVIT 294
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD-EA 441
Y +T L ER E+A+SV ++MK+ G PD+ Y+ L+ + +AN +F E
Sbjct: 295 YTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEM 354
Query: 442 VRNGV 446
RNGV
Sbjct: 355 PRNGV 359
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL-LDMEYNGV 306
+ +EA ++ M G + T+ YN + ++ L R F EA +V ++M NGV
Sbjct: 307 RFEEALSVSDRMKSSGCKPDTLFYNAL---INLLGRAGHLF----EANQVFRVEMPRNGV 359
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF----LVLIKSLYQAARVG 362
RNV T+N +IS LC+ R +DA+ + M C P+ T+ +L+ QAA V
Sbjct: 360 LRNVATYNTMISILCQYGRDDDALGVLKEMEAQSCKPDLQTYQPLLRLLLGRRGQAAAVH 419
Query: 363 E-GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E+ DR G + Y + LC + + A ++++M P T +LL
Sbjct: 420 RLLSELRDR---NGLGLDLDTYTLLIHGLCKVGETDWAYLLYDEMVGSEIVPRPRTCELL 476
Query: 422 MTK 424
+++
Sbjct: 477 LSE 479
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 7/233 (3%)
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
K T+ I PD +L+ G+C DG + EAK + M + + V Y+ ++D C
Sbjct: 393 KMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD---GYC 449
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ ++AE + M + GV NV+++N++I+ CKI+ ++A+KLF M
Sbjct: 450 LVNEV----NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIF 505
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ LI L ++ R+ E++D M G Y L LC +++A+++
Sbjct: 506 PDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITL 565
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
K+K G PD TY +L+ C +++ A +F++ + G + Y V
Sbjct: 566 LTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 106/212 (50%), Gaps = 7/212 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I G+C +DEA +L +EM+ + Y+ ++D + K R S A +
Sbjct: 477 NIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI-------SYALE 529
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
++ +M Y G ++ T+N ++ LCK + AI L ++ G P+ T+ +L+K L
Sbjct: 530 LVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLC 589
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
Q+ ++ + ++ + + GY + Y + C ++A+++ KM+ +G PD++
Sbjct: 590 QSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAK 649
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
TY++++ + D A L E + G+ V
Sbjct: 650 TYEIIILSLFEKDENDMAEKLLREMIMRGLLV 681
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I G+ + F +M D + ++V+ C++G A+ ++
Sbjct: 370 TYNALISGFCIVGKLKDAIDLFNKMTSK-NIIPDVYTFSILVDGFCKDGNIKEAKNVLAM 428
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I PD L+ G+C+ ++++A+ + M G +YN +++ K+
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKI-- 486
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ EA K+ +M + + +V T++ LI LCK R A++L M G P
Sbjct: 487 -----KMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQP 541
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ ++ +L + V + ++ ++K G Y + LC ++E A VF
Sbjct: 542 DIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVF 601
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E + G+N D Y +++ +C D+A AL + NG K Y +
Sbjct: 602 EDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 28/238 (11%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD IKG+C+ G++ +A ++ GF L V+Y +++ + K+ K L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320
Query: 291 D-------SEAEKVLLDMEYNGVPRN---------------------VETFNVLISNLCK 322
+ + V+ + +G+ ++ V T+N LIS C
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ + +DAI LF +M P+ TF +L+ + + E ++ M
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C + + +A S+F M G + ++Y++++ +C VD+A LF E
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKE 498
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 110/285 (38%), Gaps = 39/285 (13%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFL-VDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S D F + + K + L + K+ + P T +S +D + F M
Sbjct: 405 TFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGK 248
G + S +++ C+ A KL K+ + +IFPD LI G C G+
Sbjct: 465 SHR-GVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGR 523
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK--------------DPFRLD--- 291
+ A L EM+ G + + YN ILD LC+K R D
Sbjct: 524 ISYALELVDEMHYRGQQPDIITYNSILD---ALCKKHHVDKAITLLTKLKGQGIRPDMNT 580
Query: 292 --------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+A KV D+ G +V + V+I C ++A+ L +M
Sbjct: 581 YTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
E GC P+ T+ ++I SL++ ++++ M G + D
Sbjct: 641 ENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALTD 685
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 173/403 (42%), Gaps = 26/403 (6%)
Query: 35 THYLNFLSKP----FSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIF 90
+H+L+FLS P F S P +P+ D+ D + L + A P+ +LH
Sbjct: 9 SHHLSFLSPPLLRRFCSLPPPSPR--DESDAELISKLLLQHHNPFHATESPL--QLH--- 61
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
+T TP+L+ TL + L H+ N + + + D + + F
Sbjct: 62 -GITLTPTLLFHTLLRLKNHSKIALSLFHYAKTLPNPPLSHSSFTLLIDTMAKVRQFDVA 120
Query: 151 HDFLV--DNKEVLGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
+V D + L P T + I RL+ AG Q + F ++ K +++
Sbjct: 121 WQLIVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQAVRAFHDIDAFSETKTTPQDFCVLL 180
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ LC+ G+ A ++ + P K+ +LI GWC G++ A+ EM G E
Sbjct: 181 DTLCKYGHVRLAVEVFNKNKHTFPPTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEP 240
Query: 267 GTVAYNCILDCVSKLCRK-----KDPF-RLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V YN +L+ V CRK ++ F R AE+V M +G+ +V +F++L+
Sbjct: 241 NVVTYNVLLNGV---CRKVSLHPEERFERTIRNAEEVFDQMRESGIEPDVTSFSILLHVY 297
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ + + + M E G PN + +IK L + + + ++ M G +
Sbjct: 298 SRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCLASCGWLEDAERLLGEMVRDGVSPCA 357
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDG-HNPDSETYDLLM 422
Y F G + E A+ +F++MK DG P S TY +L+
Sbjct: 358 ATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSHTYVILI 400
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGE-WGCHPNETTFLVLIKSLY------QAA 359
P + +F +LI + K+R+ + A +L M + P +TFL LI+ L QA
Sbjct: 98 PLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQAV 157
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R + K+ +D+ L LC + A+ VF K K P + Y
Sbjct: 158 RAFHDIDAFSETKTT-----PQDFCVLLDTLCKYGHVRLAVEVFNKNK-HTFPPTVKMYT 211
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+L+ WC R+ A + +E + G+E Y V
Sbjct: 212 VLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNV 247
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 167/409 (40%), Gaps = 20/409 (4%)
Query: 50 TSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPE 109
TSNP+ + IA ++ NLEA +S L ++V + L+
Sbjct: 154 TSNPEGVGRVCAAIADVIAAGADANLEAALSALSPPL---------CEAVVLAVLHRFKH 204
Query: 110 AGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKTLA 167
A R F W T + F+HT T G+ + F+++ L + L
Sbjct: 205 AHRPSYRFFRWATASGGFTHTTITYCKMLLILGKTRQFESMVALLQEMGKAGTLSMDAFK 264
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
I AG +G FE M ++ GF +S ++ L G A ++
Sbjct: 265 VAIKSFAAAGEIKNAVGVFELMRKN-GFDDGVESFNCLLVALANEGLGREARQVFDKMLG 323
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ PD + L+ WC L EA R+ EM G + V +N +++ + + R+
Sbjct: 324 QYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQH-- 381
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
EA K+ M+ G P NV T+ +LI N CK + + A++ F M E C P+ T
Sbjct: 382 -----EAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVAT 436
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ A R+ +++ M G + Y + L + + A +++KM
Sbjct: 437 YTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMI 496
Query: 408 TDGHNPDSETYDLLMTKWCAHNR-VDKANALFDEAVRNGVEVKPKEYRV 455
G +P TY+++M + +R A+++E R G+ Y V
Sbjct: 497 KKGLDPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTV 545
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 133/294 (45%), Gaps = 9/294 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V+N + T + + L R G + + M R+ G + DK S ++ LC+ G
Sbjct: 103 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM-RERGLQPDKFSYDTLMAGLCKTG 161
Query: 214 YASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A K+ +D +N P D + LI G C G+LDEA +L +M E V +
Sbjct: 162 KIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFT 221
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++D LC+ RL EA++VL ME NV T++ LI LCK + DA ++
Sbjct: 222 ALMD---GLCKGD---RL-QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 274
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F RM G PN T+ LI V +++ M + G Y + LC
Sbjct: 275 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK 334
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
R +A +F MK NPD TY L+ +C R+D A LFD+ ++ V
Sbjct: 335 TGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV 388
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 132/308 (42%), Gaps = 36/308 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L +A R + +F +M++ G ++ + +++ C+ A L+K+
Sbjct: 14 IDGLCKANRLPEATTYFAKMKKK-GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR----- 283
+ P+ +I G+C K+D A +L R+M G V YN +L S LCR
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL---SGLCRNGLMD 129
Query: 284 --------------KKDPFRLDS------------EAEKVLLDMEYNGVPRNVETFNVLI 317
+ D F D+ A KV D P +V ++ LI
Sbjct: 130 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 189
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ LCK R ++A KLF +M E C P+ TF L+ L + R+ E ++++ M+
Sbjct: 190 AGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 249
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + LC ++ A VF++M G P+ TY+ L+ +C N VD A L
Sbjct: 250 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 309
Query: 438 FDEAVRNG 445
+E G
Sbjct: 310 MEEMTATG 317
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 122/250 (48%), Gaps = 10/250 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + +VE C G AE+L+++ A++ PD L+ G+C G++ EA+R+
Sbjct: 391 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 450
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M + G + V Y ++D CR P + A K+L +M NGV NV T+ L
Sbjct: 451 KRMAKRGCQPNVVTYTALID---AFCRAGKP----TVAYKLLEEMVGNGVQPNVITYRSL 503
Query: 317 ISNLCKIRRSEDAIKLFYRMG-EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
I C E+A K+ R+ + C + + V++ L + R+ E+++ +K +G
Sbjct: 504 IGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 563
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK-TDGHNPDSETYDLLMTKWCAHNRVDKA 434
Y + LC + + +AM V E+M + P++E Y+ ++ + R ++A
Sbjct: 564 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623
Query: 435 NALFDEAVRN 444
NAL DE + N
Sbjct: 624 NALADELLGN 633
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 9/291 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L + R + E ME D + + +++ LC+ G A+++ K
Sbjct: 219 TFTALMDGLCKGDRLQEAQQVLETME-DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 277
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I P+ + LI G+C+ +D A L EM G + YN ++D + K R
Sbjct: 278 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 337
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
EA ++ DM+ +V T++ LI CK+ R + A LF M + P
Sbjct: 338 A-------PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP 390
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF L++ A V + + +++ M ++ + Y + C + R+ +A V
Sbjct: 391 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 450
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
++M G P+ TY L+ +C + A L +E V NGV+ YR
Sbjct: 451 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++I G C +L EA +M + G YN + ++ C+ R A +
Sbjct: 12 IMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVL---INGFCKVHKVHR----AYLL 64
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L +M+ +G+ NV T++ +I C+ + + A KLF +M E GC PN T+ L+ L +
Sbjct: 65 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ E E++D M+ G K Y + LC +I+ A+ VFE PD
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
Y L+ C R+D+A LF++ N E
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCE 214
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 143/352 (40%), Gaps = 36/352 (10%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVK 223
T +S ID L + G+ F+RM G + + + ++ C NG S + +
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIV-RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
TA PD + LI G C G+ EA RL +M + Y+C++ KL
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL-E 371
Query: 284 KKDPFR-----------------------------LDSEAEKVLLDMEYNGVPRNVETFN 314
+ D R L +AE++L +M + +V T+
Sbjct: 372 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L+ CK+ R +A ++ RM + GC PN T+ LI + +A + ++++ M
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNRVDK 433
G Y + CG +E+A + E+++ D + D Y ++M C R+
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551
Query: 434 ANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPE-KMARKRR 484
A L + ++G + Y R L + + GK E L E ++RK R
Sbjct: 552 ALELLEAIKQSGTPPRHDIYVALIRGLCQ--GKELGKAMEVLEEMTLSRKSR 601
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
+NV T+ ++I LCK R +A F +M + G PNE T+ VLI + +V +
Sbjct: 5 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 64
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ MK +G A Y + C +++ A +F +M +G P+ TY+ L++ C
Sbjct: 65 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRVD 456
+ +D+A L DE G++ P ++ D
Sbjct: 125 NGLMDEAYELLDEMRERGLQ--PDKFSYD 151
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C N T+ ++I L +A R+ E +MK G + Y + C + ++ +A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ ++MK G P+ TY ++ +C +VD A LF + V NG
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 107
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 158/363 (43%), Gaps = 13/363 (3%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
+ + LV TL + L F W A+ SH + + D + + F
Sbjct: 79 IALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQ 138
Query: 153 FLVD-NKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
F+++ ++ L P T I R V AG Q + F+ M D D +++ L
Sbjct: 139 FIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLLDTL 198
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ GY A ++ + + K+ +LI GWC ++ A+RL EM G E V
Sbjct: 199 SKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGIEANVV 258
Query: 270 AYNCILDCVSKLCRKK-----DPF-RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
YN +L+ + CR+ D F R +AEKVL +M G+ +V +++++I +
Sbjct: 259 TYNVLLNGI---CRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIHVYSRA 315
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ E + M + G P T+ ++K L R+ + +E++ M G + Y
Sbjct: 316 HKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATY 375
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHN-PDSETYDLLMTKWCAHNRVDKANALFDEAV 442
F G + + A+ ++ KMK + PD TY++L+ + NR++ ++D+
Sbjct: 376 NCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMK 435
Query: 443 RNG 445
+G
Sbjct: 436 TSG 438
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V ++N++I L K+R+ + A + M + P TTF +LI+ A +
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAF 175
Query: 369 DRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
D M D+ L L ++ A +F + K +++ Y +L+ WC
Sbjct: 176 DDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFK-FEANAKMYTILIYGWCK 234
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRV 455
NRV A L E V G+E Y V
Sbjct: 235 INRVSIAERLLGEMVERGIEANVVTYNV 262
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
RA +P L RM +D G + VV+ LC G AE+LV D + + P
Sbjct: 314 RAHKPELTLDKL-RMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSA 372
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREM---YRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
+ K + D A RL R+M Y ++ T YN ++ KL R +
Sbjct: 373 ATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHT--YNILVGMFVKLNRMEI---- 426
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+++ DM+ +G +++++ +LI LC+ ++ ++A F M E G P + TF
Sbjct: 427 ---VQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFET 483
Query: 351 LIKSLYQA 358
L + L Q+
Sbjct: 484 LYRGLIQS 491
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 149/353 (42%), Gaps = 12/353 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL- 154
+P +V L + G A++ F W + H + + + + HD
Sbjct: 92 SPEIVGKVLQRLIDPGAALV-FFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFR 150
Query: 155 --VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
++ + T ++ I +RAG+ F+ M R G K + ++ LC+
Sbjct: 151 SRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRK-GLKAHAGVHKSILRGLCDA 209
Query: 213 GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
G S A ++ + PD + +I G +LD+A RL EM GF +YN
Sbjct: 210 GQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYN 269
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+L K R ++ L L M G P +V ++ +I+ LCK+ + ++A ++
Sbjct: 270 TVLHGFCKANRVENALWL-------LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRV 322
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
+M + GC PN T+ L+ + + E++ +M GY Y + C
Sbjct: 323 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCR 382
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+E+A V + M G PD+ Y +++ +C ++ +A+ L ++ +R G
Sbjct: 383 RNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 153/369 (41%), Gaps = 34/369 (9%)
Query: 111 GRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFK-AIHDFLVDNKEVLGPK--TLA 167
G A LGF W T ++H T + R K K A+ + NK P T
Sbjct: 824 GDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVY--RNKLCCSPNMFTFT 881
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
I L RAG + M R +G ++ +V++ LC A +L K+
Sbjct: 882 ILIHGLCRAGDIGTAYELLKEMPR-HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEE 940
Query: 228 ------EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
++F I D L+K GK+D+A RL +M G V Y+ +L L
Sbjct: 941 SGSCPPDVFTYSTIVDSLVKS----GKVDDACRLVEDMVSKGCSPNVVTYSSLL---HGL 993
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C+ +LD EA +L M +G N+ T+N +I CK+ R ++A L M + GC
Sbjct: 994 CKAG---KLD-EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 1049
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T+ VL+ + + + + +++ M GY Y L C + +E+A
Sbjct: 1050 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 1109
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG-----------VEVKP 450
+ M G P+ +Y+ ++ C +V + L ++ + N ++
Sbjct: 1110 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 1169
Query: 451 KEYRVDPRY 459
K YRVD Y
Sbjct: 1170 KTYRVDIAY 1178
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 135/315 (42%), Gaps = 11/315 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L A + L F+ ME D + +V+ L ++G A +LV+D ++
Sbjct: 919 IKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG 978
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ L+ G C GKLDEA L + M R G V YN I+D KL R + +
Sbjct: 979 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 1038
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L L +M G NV T+ VL+ CK ++EDAI L M E G PN T+
Sbjct: 1039 HL-------LEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 1091
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + V +++ M G Y + LC ++ + + + E+M +
Sbjct: 1092 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 1151
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
+ PD T++ ++ C RVD A LF+ +G Y L K ++
Sbjct: 1152 NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS---RR 1208
Query: 469 GKKRETLPEKMARKR 483
+ E L +M RK+
Sbjct: 1209 FDQAEYLLREMTRKQ 1223
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 14/327 (4%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPK---TLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
F RR D + H L + P ++ I +AG+ + E+M R G +
Sbjct: 380 FCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIR-RGCRP 438
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D L +++ LC+ A++L++ + PD +LI C +L EA+
Sbjct: 439 DVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNV 315
M + V YN ++D + K R D F +L D M GV +V T+++
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF--------LLFDRMRAAGVMPDVVTYSI 550
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I + CK + A K+ RM E C P+ T+ LI L +A V + ++ M G
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
A Y + LC I ++EQA + E M+ PDS TY L+ C +R+++A
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAW 670
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+ E G Y R L+K
Sbjct: 671 RVLREMKDKGCLPDRMTYGTLLRALQK 697
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 118/271 (43%), Gaps = 9/271 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREM 259
+ +++ LC G A +L+K+ P + I +++IKG C KLD A L +EM
Sbjct: 879 TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM 938
Query: 260 YRGGFELGTV-AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
G V Y+ I+D + K + D RL + DM G NV T++ L+
Sbjct: 939 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRL-------VEDMVSKGCSPNVVTYSSLLH 991
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LCK + ++A L RM GC PN T+ +I + R+ E +++ M G
Sbjct: 992 GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQP 1051
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y L C + E A+ + E M G+ P+ TY+ L+ +C + V++A L
Sbjct: 1052 NVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLL 1111
Query: 439 DEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
++ G Y L K V +G
Sbjct: 1112 SSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 1142
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 136/321 (42%), Gaps = 31/321 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ +D LV++G+ E M G + + ++ LC+ G A L++
Sbjct: 950 TYSTIVDSLVKSGKVDDACRLVEDMVSK-GCSPNVVTYSSLLHGLCKAGKLDEATALLQR 1008
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T + P+ + +I G C G++DEA L EM GG + V Y +LD K +
Sbjct: 1009 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 1068
Query: 284 KKDPFRL-------------------------DSEAEK---VLLDMEYNGVPRNVETFNV 315
+D L E E+ +L M G NV ++N
Sbjct: 1069 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 1128
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I+ LCK + + + L +M C P+ TF +I ++ + RV E+ + ++ +G
Sbjct: 1129 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 1188
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKM-KTDGHNPDSETYDLLMTKWCAHNRVDKA 434
Y + LC R +QA + +M + G +PD TY+ ++ C RVD+A
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248
Query: 435 NALFDEAVRNGVEVKPKEYRV 455
LF + + +G+ Y +
Sbjct: 1249 YKLFLQMLSDGLAPDDVTYSI 1269
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 121/294 (41%), Gaps = 9/294 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VDN + + + +A R L E+M G D S V+ LC+
Sbjct: 256 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVT-RGCPPDVVSYTTVINGLCKLD 314
Query: 214 YASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A +++ K P+ L+ G+C G LD A L R+M G+ + YN
Sbjct: 315 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 374
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
I+ CR+ D R A +VL M G P + ++ +IS CK + +A L
Sbjct: 375 NIM---HVFCRRNDMER----AHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDL 427
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
+M GC P+ LI +L +AA + E++ A Y + LC
Sbjct: 428 LEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCK 487
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+R+ +A S + M + PD TY+ ++ C R++ A LFD GV
Sbjct: 488 AKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGV 541
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D R G + +M + G++ + + ++ C A ++++
Sbjct: 337 TYGTLVDGFCRVGDLDGAVELVRKMT-ERGYRPNAITYNNIMHVFCRRNDMERAHQVLQM 395
Query: 225 TANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D I +I G+C GKL EA L +M R G + ++D LC+
Sbjct: 396 MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLID---ALCK 452
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+DS E + + + + P +V +++LI LCK +R +A M + C+P
Sbjct: 453 AA---AIDSAQELLRMSIGMDCAP-DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYP 508
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ ++ L ++ R+ + + DRM++AG Y + C ++ A +
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
E+MK PD TY L+ C VDKA +F E + G
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+V LC++ AE L+++ + PD + +I G C ++D A +L +M
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G V Y+ + +S LC+ +R EA VL M NG T+ LI CK
Sbjct: 1259 GLAPDDVTYSIV---ISSLCK----WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 1311
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ A+++ + G +P+ TF + I L + R+ + E+++ M AG
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 1371
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y L C E A+ +FE M+ G PD+ TY L+
Sbjct: 1372 YNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 13/319 (4%)
Query: 133 TLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + D F G+ +D + + +V+ V T S +D + + M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGK 248
+ G + S V+ LC+ L++ +N PD + +I C +
Sbjct: 1115 IQK-GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 1173
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY-NGVP 307
+D A L + G V YN + V LC+ + R D +AE +L +M G
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSL---VHGLCKSR---RFD-QAEYLLREMTRKQGCS 1226
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ T+N +I LCK +R + A KLF +M G P++ T+ ++I SL + + E + +
Sbjct: 1227 PDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNV 1286
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
++ M G+ G Y + C +++A+ + + + + G PD T+ + +
Sbjct: 1287 LELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSK 1346
Query: 428 HNRVDKANALFDEAVRNGV 446
R+ +A L + +R G+
Sbjct: 1347 RGRLRQAGELLETMLRAGL 1365
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+ G C + D+A+ L REM R G + YN ++D LC+ K R+D A K+
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVID---GLCKSK---RVD-RAYKL 1251
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L M +G+ + T++++IS+LCK R ++A + M + G P T+ LI +
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 1311
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ + E++ + S G + F+ L R+ QA + E M G PD+ T
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 1371
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
Y+ L+ +C + + A LF+ + G E Y
Sbjct: 1372 YNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATY 1407
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 124/319 (38%), Gaps = 47/319 (14%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
+D +S D +A+ L + + L P+ + + RL+ P L FFE
Sbjct: 60 SDSPISVLERIVQGASDEQALRVALDEYRGQLSPEIVGKVLQRLID---PGAALVFFEWA 116
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGK 248
E G++ + ++ L + S A L + + D + LI G+ GK
Sbjct: 117 ETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGK 176
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+ A L EM R G + + GV +
Sbjct: 177 ILPAYELFDEMNRKGLK------------------------------------AHAGVHK 200
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++ + LC + DA+ F M + C P+ T+ +I L ++ R+ + ++
Sbjct: 201 SI------LRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLL 253
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M G+A Y L C R+E A+ + E+M T G PD +Y ++ C
Sbjct: 254 EEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKL 313
Query: 429 NRVDKANALFDEAVRNGVE 447
++VD+A + D+ ++ G +
Sbjct: 314 DQVDEACRVMDKMIQRGCQ 332
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 9/223 (4%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
D +V N+ T S +D L ++ R F+RM R G D + +V+ C+
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM-RAAGVMPDVVTYSIVIHSFCK 557
Query: 212 NGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ A K+++ + PD LI G C G +D+A + +EM G V
Sbjct: 558 DNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVT 617
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
YN ++D + K+ +++ AE + + + + P ++ T+ LI+ LC R E+A
Sbjct: 618 YNTLIDGLCKI------NKVEQAAEMLEIMRKQSCTPDSI-TYTCLINGLCNASRLEEAW 670
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
++ M + GC P+ T+ L+++L + + ++++ M++
Sbjct: 671 RVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 134/342 (39%), Gaps = 65/342 (19%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L ++ R + F +M D G D + +V+ LC+ + A +++
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSD-GLAPDDVTYSIVISSLCKWRFMDEANNVLEL 1289
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
F P LI G+C G LD+A + + + G V ++ +D +SK R
Sbjct: 1290 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGR 1349
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +A ++L M G+ + T+N L+ C +EDA+ LF M + GC P
Sbjct: 1350 LR-------QAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEP 1402
Query: 344 NETTFLVLI------------------------------------KSLYQAARVGEGDEM 367
+ T+ L+ S+ A V G +
Sbjct: 1403 DNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAI 1462
Query: 368 IDRMKSAGYAIGKKDYYEFL--------TRLCGI----ERIEQAMSVFEKMKTDGHNPDS 415
+D G + +E + + + G+ ++ EQA ++ M +G PD+
Sbjct: 1463 VDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDA 1522
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
T+ L+T C H L D AV V + ++Y ++P
Sbjct: 1523 VTFLSLLT-MCCH------AGLLDAAVDEFVSIS-RDYGLEP 1556
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 9/240 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
I L +A R + + + M ++ + D + VV+ LC++ + A L + A
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKNRCYP-DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAG 540
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++I +C D LD A ++ M V Y+ + ++ LC+
Sbjct: 541 VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSAL---INGLCKAGTV- 596
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A V +M G N+ T+N LI LCKI + E A ++ M + C P+ T+
Sbjct: 597 ---DKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITY 653
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L A+R+ E ++ MK G + Y L L +E + ++M+
Sbjct: 654 TCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 8/212 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T S + L ++ R Q M R G D + V++ LC++ A KL ++
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 1254
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + PDD ++I C +DEA + M + GF+ G + Y ++D C+
Sbjct: 1255 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID---GFCK 1311
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ LD E + L + P +V TF++ I L K R A +L M G P
Sbjct: 1312 TGN---LDKALEILQLLLSKGSYP-DVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 1367
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+ T+ L+K A+ + ++ + M+ G
Sbjct: 1368 DTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 10/288 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
+ RL A L R + D + +V C++G + A ++
Sbjct: 9 VRRLCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLG 68
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P++ LI G+ V G+ + L EM RGG E YNC+ V + CR +
Sbjct: 69 VTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCL---VGEWCRTGE-- 123
Query: 289 RLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
++ ++L D M GV RNV ++N+LI+ LC+ + +DA +LF M G HP+ T
Sbjct: 124 ---FKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVT 180
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F +LI +A ++ ++MK+AG Y E + C I A+ F MK
Sbjct: 181 FNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMK 240
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P TY +L+ + N +D+A + E + G+EV + Y V
Sbjct: 241 ERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGV 288
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 19/289 (6%)
Query: 184 GFFERMERDYGFKRDKDSLRLVVE-----------KLCENGYASYAEKLVKDTANEIFPD 232
G+F R +R+ GF + R VE + C G A L + +
Sbjct: 82 GYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVR 141
Query: 233 DKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ + ++LI G C GKL +A +L M R G V +N ++D K + +
Sbjct: 142 NVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFF 201
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
++ M+ G+ +V T+N LI C+ R AI+ F M E P + T+ +L
Sbjct: 202 NQ-------MKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTIL 254
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + + + EM+ M+ AG + + Y L LC ++ A +F+ M + G
Sbjct: 255 IGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGV 314
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
P++ YD+++ + KA L E ++G+ Y + R L
Sbjct: 315 KPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLL 363
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 35/249 (14%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G R+ S +++ LC +G A +L + E I P +LLI G+ GK+ A
Sbjct: 138 GVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNA 197
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD-------------------------- 286
+M G + V YN + + CR +D
Sbjct: 198 LHFFNQMKAAGLQPSVVTYN---ELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTIL 254
Query: 287 --PFRLDSEAEK---VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
F ++E ++ +L +ME G+ +V+++ VL+ LC + A KLF M G
Sbjct: 255 IGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGV 314
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN + ++I + + +I M+ +G Y + LC + ++A +
Sbjct: 315 KPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEA 374
Query: 402 VFEKMKTDG 410
+ M+ G
Sbjct: 375 LIGDMEDAG 383
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 16/339 (4%)
Query: 113 AILGFNHWLTQNA--NFSHTDETLSFFT--DYFGRRKDFKAIHDFLVDNKEVLGPKTLAS 168
A+ FNH + ++ D+ LS ++G + L ++V L +
Sbjct: 68 ALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILIN 127
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVKDTAN 227
C RL R VLG ++ GF+ D + ++ LC E+ +A E + A+
Sbjct: 128 CFSRLQRVDFAFSVLGKIIKL----GFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS 183
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P+ + +IKG+C GK A L ++M + G V YN I+D LC+
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIID---GLCKD--- 237
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RL SEA + +++ GV +V T+++L+ LC + E+A LF M P+ T
Sbjct: 238 -RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F +L+ L + + E +I M G Y + C ++ +A VF+ M
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
T G P+ +Y++L+ +C R+D+A LFDE G+
Sbjct: 357 TKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL 395
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 12/303 (3%)
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFK 196
F D F R +F D +V + T + I + G+ T +G ++M++ G +
Sbjct: 166 FEDKFARAMEF---FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGG-R 221
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRL 255
D +++ LC++ S A + + + + PD +L+ G C + +EA L
Sbjct: 222 PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASAL 281
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
EM V +N ++D KLC++ + SEA+ ++ M GV N T+N
Sbjct: 282 FNEMMSLNIMPDVVTFNILVD---KLCKEG----MLSEAQGIIKIMIEKGVEPNYATYNS 334
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L++ C + +A +F M GC PN ++ +LI +A R+ E E+ D M G
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG 394
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+Y ++ LC R +A +F+ M+ G +PD T +L+ C +D A
Sbjct: 395 LIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNAL 454
Query: 436 ALF 438
LF
Sbjct: 455 RLF 457
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 14/255 (5%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN- 227
C DRLV ++ L F + + G + D + +++ LC + A L + +
Sbjct: 235 CKDRLV-----SEALDIFSEI-KGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSL 288
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
I PD ++L+ C +G L EA+ + + M G E YN +++ C +
Sbjct: 289 NIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMN---GYCLQNKV 345
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
F EA V M G NV ++N+LI+ CK +R ++A +LF M G PN
Sbjct: 346 F----EARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFN 401
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ LI L QA R E E+ M++ G + L LC + ++ A+ +F M+
Sbjct: 402 YNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ 461
Query: 408 TDGHNPDSETYDLLM 422
P+ TYD+L+
Sbjct: 462 DSCLKPNLVTYDILI 476
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD LI G C + K A EM G++ YN I+ K+ +
Sbjct: 152 PDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKT------ 205
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ A +L M+ G ++ +N +I LCK R +A+ +F + G P+ T+ +
Sbjct: 206 -TVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSI 264
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ L + + E + + M S + + +LC + +A + + M G
Sbjct: 265 LMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKG 324
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+ TY+ LM +C N+V +A +FD + G Y +
Sbjct: 325 VEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 100/211 (47%), Gaps = 7/211 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++LI + ++D A + ++ + GFE V ++ + ++ LC + D F + A +
Sbjct: 123 NILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSL---INGLCFE-DKF---ARAME 175
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+M +G N+ T+N +I CKI ++ A+ L +M + G P+ + +I L
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ V E ++ +K G Y + LC ++ E+A ++F +M + PD
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
T+++L+ K C + +A + + GVE
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVE 326
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 23/176 (13%)
Query: 202 LRLVVEKLCENGYASYAE--------------KLVKDT--ANEIFPDDKICDLLIKGWCV 245
+++++EK E YA+Y ++V D P+ ++LI G+C
Sbjct: 317 IKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCK 376
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
++DEA+ L EM G T YN + +S LC+ EA ++ DM+ G
Sbjct: 377 AQRIDEARELFDEMSFRGLIPNTFNYNTL---ISGLCQAGR----HCEARELFKDMQAQG 429
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
++ T +L+ +LCK+ ++A++LF M + PN T+ +LI+++Y++ ++
Sbjct: 430 CSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T S I L + G + + F ++M RD + + ++ LC+ A +L +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEFLDQMITRDC--SPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 224 D-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
T+ I PD + LI+G C+ A L EM G E YN ++D LC
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID---SLC 446
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
K +LD EA +L ME +G R+V T+N LI CK + +A ++F M G
Sbjct: 447 SKG---KLD-EALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVS 502
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N T+ LI L ++ RV + +++D+M G K Y LT C I++A +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADI 562
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ M ++G PD TY L++ C RV+ A+ L G+ + P Y
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAY 613
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 30/272 (11%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDE 251
+G K D + ++++ LC A +++D + + PD+K +++G+ +G LD
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDG 242
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE------------------ 293
A R+ +M G V+ N I+ K R +D E
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 294 -----------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
A +++ M G +V T+N +IS LCK+ ++A++ +M C
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCS 362
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ LI +L + +V E E+ + S G + + LC AM +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
FE+M++ G PD TY++L+ C+ ++D+A
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 87/189 (46%), Gaps = 8/189 (4%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN-G 305
G D+ +++ +M G E+GT + +++ ++ F L E V+ M + G
Sbjct: 97 GSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQ-------FELQDEILGVVHWMIDDFG 149
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ + +N +++ L + +M WG P+ +TF VLIK+L +A ++
Sbjct: 150 LKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
M++ M S G +K + + ++ A+ + E+M G + + + ++++ +
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 426 CAHNRVDKA 434
C RV+ A
Sbjct: 270 CKEGRVEDA 278
>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Brachypodium distachyon]
Length = 476
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 14/276 (5%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDD 233
R RP L F S V+ L + + A L+ D A P
Sbjct: 102 RTHRPLAALQLFRSAPSALALPHSARSYTAVLATLVSHSHLPLAHSLLADMRAGGFAPTT 161
Query: 234 KICDLLIKGWCVDGK--LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
++L+K C D +++A RL R + + +YN ++D + + R+ D
Sbjct: 162 ATYNVLLKAHCSDASAPIEDAVRLFRNIPKPD----ACSYNTVIDGLCRRSRRAD----- 212
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A+++ +M NGV V T+ +I+ L + +DA+K+F MG G PN T+ L
Sbjct: 213 --AQEIFSEMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSL 270
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L + R E++DRM Y + LC +R+ +AM V ++M+ G
Sbjct: 271 IDGLCKGGRAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGR 330
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PD+ + L+ C R +A DE V +GVE
Sbjct: 331 KPDAGLFGKLIVGLCGAGRAVEAANYLDEMVLSGVE 366
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 11/213 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVK 223
T +S ID L + GR L +RM ++ + + V+ LC E+ E L +
Sbjct: 266 TYSSLIDGLCKGGRAASALELLDRMAKEAKLP-NTITYSSVINGLCKEDRLNEAMEVLDR 324
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL----DCVS 279
PD + LI G C G+ EA EM G E V ++ + V+
Sbjct: 325 MRLQGRKPDAGLFGKLIVGLCGAGRAVEAANYLDEMVLSGVEPNRVTWSLHVRINDAVVT 384
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC K + R +V M G+ TF++L+ K E A + M
Sbjct: 385 ALCAKGEAGR----TFRVYQSMRTRGISTEPGTFHLLVEFFSKKNDLEKAAHVVLDMLSE 440
Query: 340 GCHPNETTFLVLIKSLYQAARV-GEGDEMIDRM 371
C P T+ +++ + +V E ++M +++
Sbjct: 441 KCIPERETWDIILTRYWSKKKVRQEAEQMWNQL 473
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 157/373 (42%), Gaps = 11/373 (2%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S + T LV L LG W + HT D G+ K F +
Sbjct: 59 SGINATNDLVSQLLERFSNQWITALGVFIWAKNQTGYVHTPRLYDLVVDILGKCKKFGIM 118
Query: 151 HDFLVDNKEVLGP---KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
+ + E+ G T++ + RL +G V+ +E+ Y K+D +L +V+
Sbjct: 119 WKVVNEMNELNGQVSFSTMSIVVRRLASSGMYKDVIDVLRGLEK-YRVKKDTVALNMVMH 177
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
L + G A A + + + I D ++LI G+C LD+A++ EM + GF
Sbjct: 178 ALAKQGGAKDAYSVFLEFKDSITLDSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPD 237
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+Y C + C++KD FR E +L +M G +V +++ I L K R+
Sbjct: 238 ASSYTCF---IKAYCKQKD-FR---NVEVILNEMGEKGCEPDVIAYSIYIRALGKARKIN 290
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A++++ +M + C P+ F LI L ++ R+ + + + M++ G + Y +
Sbjct: 291 EALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDMENHGVSRDLWTYNAMI 350
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C + A+ + E+M+ + PD ETY L+ C + L N V
Sbjct: 351 YHACANRQGNSALKLLERMEVNSCKPDLETYQPLLKMCCKMKDMKVLKFLLSHMFNNNVR 410
Query: 448 VKPKEYRVDPRYL 460
+ Y + R L
Sbjct: 411 IDLSTYALLIREL 423
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + ID L + G+ + M + G K D ++++ C G A+++ +
Sbjct: 222 TYNTLIDTLCKEGKVKESKNLLAVMTKK-GVKPDVVIYSILMDGYCLVGEVQKAKQIFLV 280
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD +++I G C ++DEA L REM TV Y+ ++D + KL R
Sbjct: 281 MVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGR 340
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
L E M + G P N+ T+N L+ LCK + + AI LF +M E G P
Sbjct: 341 ITTILDLTKE-------MHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQP 393
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N+ T+ LI L + R+ +G + + GY I Y ++ LC ++A+++
Sbjct: 394 NKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMK 453
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
KM+ +G P++ T+++++ + DKA L E + G+
Sbjct: 454 SKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGL 496
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 32/277 (11%)
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+KL + Y Y+E A IFPD LI G+C+ G+L EA L EM
Sbjct: 163 DKLVDEAYDLYSEM----NARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINP 218
Query: 267 GTVAYNCILDCVSKLCRKK-------------------------DPFRLDSEAEK---VL 298
YN ++D + K + K D + L E +K +
Sbjct: 219 NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIF 278
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
L M GV +V ++N++I+ LCK +R ++A+ L M P+ T+ LI L +
Sbjct: 279 LVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ ++ M G Y L LC + +++A+++F KMK G P+ TY
Sbjct: 339 GRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 398
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
L+ C R+ K ALF + G + Y V
Sbjct: 399 TALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTV 435
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 95/222 (42%), Gaps = 7/222 (3%)
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
A I PD +LI +C G++ + + ++ + G++ T+ N ++ LC K
Sbjct: 38 AKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLM---KGLCLKG 94
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ + +KV+ G + ++ +L++ LCKI + AIKL + + P+
Sbjct: 95 EVKKSLHFHDKVV----AQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDV 150
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ +I L + V E ++ M + G Y + C ++ +A + +
Sbjct: 151 VMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNE 210
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M NP+ TY+ L+ C +V ++ L + GV+
Sbjct: 211 MILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVK 252
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ ++ T ++LI+ C + + + + ++ + G PN L+K L
Sbjct: 36 MEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGE 95
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + D++ + G+ + + Y L LC I A+ + ++ PD Y
Sbjct: 96 VKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYST 155
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
++ C VD+A L+ E G+
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGI 181
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T +S ID L + GR T +L + M G + + +++ LC+N A L +K
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHR-GQPANLVTYNSLLDGLCKNQNLDKAIALFMK 385
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I P+ LI G C G+L + + L + + G+ + Y + +S LC+
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVM---ISGLCK 442
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + EA + ME NG N TF ++I +L + ++ A KL + M G P
Sbjct: 443 EG----MFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 174/398 (43%), Gaps = 35/398 (8%)
Query: 80 LPISQRLH----LIFSHVTPTPSLVQST-LNFSPEAGRAILGFNHWLTQNANFSHTDETL 134
+P+S++ H LI +H P ST + + + A+ FN L QN + +
Sbjct: 8 VPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIE--- 64
Query: 135 SFFTDYFGRRKDFKAIHD--FLVDNKEVLGPK-TLASC---IDRLVRAGRPTQVLGFFER 188
F G K H +L E G K L +C I+ + G +
Sbjct: 65 --FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTK 122
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV---KDTAN--------EIFPDDKICD 237
+ + G+K + +L +++ LC NG +V KD + I PD
Sbjct: 123 ILK-MGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFT 181
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+L+ G+C +G++ EAK + M G + G V YN ++D + + ++A+ +
Sbjct: 182 ILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLV-------KQVNKAKSI 234
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M GV +++++++LI+ CKI+ ++A++L M PN T+ LI L +
Sbjct: 235 FNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCK 294
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ ++ +++D M G Y L LC +++ A+++ +MK G P+ T
Sbjct: 295 SGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYT 354
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y +L+ C +++ A +F++ + G + Y V
Sbjct: 355 YTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 106/213 (49%), Gaps = 7/213 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + +LI G+C +DEA L +EM+ V Y+ ++D LC+
Sbjct: 245 PDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLID---GLCKSGKI--- 298
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
S A K++ +M G P N+ T++ ++ LCK + ++AI L +M G PN T+ +
Sbjct: 299 -SYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTI 357
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LIK L Q+ ++ + ++ + + G+ + Y + C ++A+++ KM+ +G
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNG 417
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
P+++TY++++ + + A L E +
Sbjct: 418 CIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 134/294 (45%), Gaps = 12/294 (4%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-N 212
++DN T I + G+ +V+ E+M G K D + ++ LC +
Sbjct: 233 MIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSAR-GLKPDCYTYGSLLNYLCALS 291
Query: 213 GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
S+ + +V+ N + PD I ++ + G +D+A + +M + G V Y
Sbjct: 292 EMHSFLDLMVE---NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 348
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++D + KL R D AE M GV N+ FN L+ LC + + E A +L
Sbjct: 349 ALIDALCKLGRVDD-------AEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 401
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
Y M + G PN F LI +L RV EG +ID M+ G Y ++ C
Sbjct: 402 VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL 461
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
R ++A VF+ M + G +P TY+ L+ +C+ +R+D A LF E +R GV
Sbjct: 462 AGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 515
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
I L GR + + ME G + D S ++ C G AEK+ +
Sbjct: 421 ICNLCNVGRVMEGRRLIDLMEH-VGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIG 479
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + + L+ G+C ++D+A L REM R G G V YN IL + + R
Sbjct: 480 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRF---- 535
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
SEA+++ L+M +G ++ T+N++++ LCK ++A K+F + G N TF
Sbjct: 536 ---SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 592
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++I +L + R + ++ + + G Y L +E+ S+F M+
Sbjct: 593 TIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 652
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANA 436
+G P+S+ + L+ + + +A A
Sbjct: 653 NGTAPNSQMLNALVRRLLHRGDISRAGA 680
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 138/344 (40%), Gaps = 14/344 (4%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
T +Y + + D +V+N + G + + F +M R
Sbjct: 279 TYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQ 337
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDE 251
+G + + +++ LC+ G AE NE + P+ + + L+ G C K +
Sbjct: 338 HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER 397
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A+ L EM G V +N + + LC E +++ ME+ GV +
Sbjct: 398 AEELVYEMLDQGICPNAVFFNTL---ICNLCNVGRVM----EGRRLIDLMEHVGVRPDAF 450
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
++ LIS C R+++A K+F M G P E T+ L+ A+R+ + + M
Sbjct: 451 SYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 510
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G G Y L L +R +A ++ M G D TY++++ C N V
Sbjct: 511 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCV 570
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
D+A +F G+++ + + L +K G+K + +
Sbjct: 571 DEAFKMFQSLCSKGLQLNIITFTIMIGAL-----LKGGRKEDAM 609
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 124/305 (40%), Gaps = 48/305 (15%)
Query: 182 VLGFFERMERDYGFKRDKDSL--RLVVEKLCENG-----YASYAEKLVKDTANEIFPDDK 234
V+ F RM R+ K ++ +++ LC G +A++ L+ T + +D
Sbjct: 79 VVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFG--LILKTGWRV--NDI 134
Query: 235 ICDLLIKGWCVDGKLDEAKR-LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ + L+KG C ++ EA L + M G TV+Y+ +L R ++ L
Sbjct: 135 VINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALEL--- 191
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+++ + P NV T+ +I LCK + + A +F +M + G PN T+ LI
Sbjct: 192 -LRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIH 250
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER------------------ 395
+ E +M+++M + G Y L LC +
Sbjct: 251 GYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHH 310
Query: 396 --------------IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
I++AM +F KM+ G +P+ Y L+ C RVD A F++
Sbjct: 311 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 370
Query: 442 VRNGV 446
+ GV
Sbjct: 371 INEGV 375
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 7/207 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C+ G+ DEA+++ M G V YN +L R D + L E
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE----- 509
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M GV V T+N ++ L + +R +A +L+ M G + T+ +++ L ++
Sbjct: 510 --MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKS 567
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
V E +M + S G + + + L R E AM +F + +G P+ TY
Sbjct: 568 NCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTY 627
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+ +++ ++LF +NG
Sbjct: 628 RLVAENLIEEGSLEEFDSLFSAMEKNG 654
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 18/247 (7%)
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
LD+A +L E+ VA+N IL+ VS+ R + ++++ + +N + R
Sbjct: 30 LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSL-FNRMVR 88
Query: 309 --------NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
N T+++LI LC++ R + + F + + G N+ L+K L R
Sbjct: 89 ECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKR 148
Query: 361 VGEG-DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN----PDS 415
VGE D ++ RM G Y L C R E+A+ + M D H P+
Sbjct: 149 VGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND-HGRSCPPNV 207
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
TY ++ C D+A +F + + NGV+ Y + +++ K K+ +
Sbjct: 208 VTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNC---LIHGYLSIGKWKEVVQM 264
Query: 476 PEKMARK 482
EKM+ +
Sbjct: 265 LEKMSAR 271
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 142/317 (44%), Gaps = 11/317 (3%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV---LGPKTLASC 169
A GF W + H + + D G+ K F + + E+ + T+
Sbjct: 142 AAFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQFDLLWGLIRQMDEIGCLVSLATMTKV 201
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ RL A R T + F +M++ +G RD ++ +++ LC+ A + ++ +
Sbjct: 202 MRRLAGANRWTDAIDAFNKMDQ-FGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGVV 260
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD+ + L+ GWC L+EA+ +EM GF + Y +++ C +KD F+
Sbjct: 261 PPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIE---AYCMEKD-FQ 316
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+L +M G NV T+ +++ L K R+++A+ +F ++ GC P+ + +
Sbjct: 317 ---TVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYN 373
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+I L +A R+ + + + D M G + ++ C + E A+ + KM+
Sbjct: 374 SIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQ 433
Query: 410 GHNPDSETYDLLMTKWC 426
PD +TY L+ C
Sbjct: 434 SCKPDIKTYTPLLKLCC 450
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 178/413 (43%), Gaps = 19/413 (4%)
Query: 61 QVIARSLSGELLENLEAD--------PLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGR 112
+V+ +S + L+ LEA P P L L P+ LV LN
Sbjct: 83 KVLTQSPKQDNLDELEAVTKVLQKRYPSPELASLALDGLSFQPSSGLVSQVLNRFSNDWV 142
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLAS---C 169
LGF W + H+ E + D G+ + F ++ + + + + G TL +
Sbjct: 143 PALGFFKWAKSLTGYRHSPELYNLMVDILGKCRSFDSMSELVEEMARLEGYVTLETMTKV 202
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ RL RA + + F RME+ +G K+D +L ++++ L + +A K+V + I
Sbjct: 203 MRRLARARKHEDAIEAFGRMEK-FGVKKDTAALNVLIDALVKGDSVEHAHKVVLEFKGSI 261
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
+ ++L+ GWC D A++ +M GFE +Y ++ ++D FR
Sbjct: 262 PLSSRSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYG---HERD-FR 317
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ ++VL +M NG P N T+ ++ +L K + A++++ +M GC + +
Sbjct: 318 ---KVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYS 374
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+I L +A R+ + ++ + M G Y ++ C R E A+ + ++M+
Sbjct: 375 SMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDG 434
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
P+ TY L+ C R+ L D +N + Y + L+K
Sbjct: 435 SCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNISPDLATYSLLVNALRK 487
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 177/393 (45%), Gaps = 29/393 (7%)
Query: 38 LNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTP 97
++ S +S+P++ + D + + GE L N P S F H T
Sbjct: 130 IDSTSAGHNSRPSAAGASTSGYDGLRGGTDDGEPLSNPIISPNSTS------FDHST--- 180
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDN 157
V+ TL+ + L F W+ F+HT +T + D G+ +F I +
Sbjct: 181 --VRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRM 238
Query: 158 KE--VLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
K V P T R A + + + R E ++ RD+ S +++ LCE
Sbjct: 239 KADPVAYPNHVTFRFVFKRYAAAHLVEEAMNAYYRTE-EFNL-RDETSYSNLIDALCEYK 296
Query: 214 YASYAEKL-VKDTANEIFPDD-KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
+ AE+L +K++ + +F DD KI +++++GW G + + EM R G +Y
Sbjct: 297 HVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSY 356
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+ +D C+ P+R A K+ +M+ G+ +V +N +I + + +I+
Sbjct: 357 SIYMDI---QCKSGKPWR----AVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIR 409
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+F M E GC PN T+ +IK L + R+ E + D+M+ GYA Y+ F C
Sbjct: 410 VFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFG--C 467
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
IE+ +Q + F++M G P +TY +LM K
Sbjct: 468 -IEKPKQILRTFDRMINSGVRPRMDTYVMLMKK 499
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 157/369 (42%), Gaps = 34/369 (9%)
Query: 88 LIFSHVTP-TPSLVQSTLNFSPEAGRAILGFNHWL-TQNANFSHTDETLSFFTDYFGRRK 145
L+ + TP TP+LV S L G L F H+L + + H + D R
Sbjct: 40 LLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLH 99
Query: 146 DFKAIHDFLVDNKEV-LGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+ + + + +GP KT A +R AG+P + + F M ++G +D S
Sbjct: 100 LHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMH-EHGCFQDLASF 158
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ LC++ A +L + D ++++ GWC+ + + + +EM
Sbjct: 159 NTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVER 218
Query: 263 GFELGTVAYNCIL----------------------DC---VSKLCRKKDPFRLDSE---A 294
G YN +L DC V F + E A
Sbjct: 219 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 278
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
V +M GV +V T+N +I LCK E+A+ +F M G PN TT+ VLI+
Sbjct: 279 RNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG 338
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L+ A G+E++ RM++ G + Y + +E+A+ +FEKM + P+
Sbjct: 339 LFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 398
Query: 415 SETYDLLMT 423
+TY++L++
Sbjct: 399 LDTYNILIS 407
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE-KLVK 223
T + + RAG+ FF M+ KRD + + +V +G+ E K +
Sbjct: 226 TYNTMLKGFFRAGQIRHAWEFFLEMK-----KRDCE-IDVVTYTTVVHGFGVAGEIKRAR 279
Query: 224 DTANE-----IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+ +E + P + +I+ C ++ A + EM R G+E YN ++
Sbjct: 280 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI--- 336
Query: 279 SKLCRKKDPFRLD--SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ F S E+++ ME G N +T+N++I + E A+ LF +M
Sbjct: 337 ------RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 390
Query: 337 GEWGCHPNETTFLVLIKSLYQAAR 360
G C PN T+ +LI ++ R
Sbjct: 391 GSGDCLPNLDTYNILISGMFVRKR 414
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L +A + + E M YG D+ + +++ E G A ++ +
Sbjct: 210 IKALCKAHQVRPAILMMEEMP-SYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268
Query: 230 FP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P D ++LI G+C G++D+A +E GF YN +++ + K+ K
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAK--- 325
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A +V+ M G+ ++ T+N LIS LCK+ E+A+K+ +M C PN T+
Sbjct: 326 ----HAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTY 381
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I SL + RV E E+ + S G + + LC + AM +FE+MK
Sbjct: 382 NAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG 441
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G PD TY++L+ C+ ++++A L E NG
Sbjct: 442 KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG 478
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 11/291 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T S I L + G + + ++M RD + + ++ LC+ A ++ +
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDC--SPNAVTYNAIISSLCKENRVDEATEIAR 402
Query: 224 D-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
T+ I PD + LI+G C+ A L EM G YN ++D LC
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLID---SLC 459
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ +L+ EA +L +ME NG RNV +N LI CK +R E+A ++F M G
Sbjct: 460 SSR---KLE-EALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVS 515
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
+ T+ LI L ++ RV + +++D+M G K Y LT C I++A +
Sbjct: 516 RDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADI 575
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ M + G NPD TY L++ C RV A+ L G+ + P Y
Sbjct: 576 VQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAY 626
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 132/318 (41%), Gaps = 44/318 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + + G L E+M +YG ++ +++ C+ G A +++
Sbjct: 240 TFTTIMQGYIEGGNLDGALRIKEQM-VEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+E F PD + L+ G C G A + M GG + YN + +S LC+
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSL---ISGLCK 355
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED--------------- 328
+ EA K+L M N T+N +IS+LCK R ++
Sbjct: 356 LGEI----EEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILP 411
Query: 329 --------------------AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
A+ LF M GC P+E T+ +LI SL + ++ E ++
Sbjct: 412 DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLL 471
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M+ G A Y + C +RIE+A +F++M+ G + DS TY+ L+ C
Sbjct: 472 KEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS 531
Query: 429 NRVDKANALFDEAVRNGV 446
RV+ A L D+ + G+
Sbjct: 532 KRVEDAAQLMDQMIMEGL 549
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 7/212 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD+ ++LI C KL+EA L +EM G V YN ++D C+ K R+
Sbjct: 446 PDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID---GFCKNK---RI 499
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ EAE++ +ME GV R+ T+N LI LCK +R EDA +L +M G P++ T+
Sbjct: 500 E-EAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ + + + +++ M S+G Y ++ LC R++ A + ++ G
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y+ ++ NR +A LF E +
Sbjct: 619 MVLTPHAYNPVIQALFKRNRTHEAMRLFREML 650
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 9/263 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + + FE M + G + D+ + ++++ LC + A L+K+
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEM-KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + I + LI G+C + +++EA+ + EM G +V YN ++D LC+
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID---GLCK 530
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K R++ +A +++ M G+ + T+N L+++ CK + A + M GC+P
Sbjct: 531 SK---RVE-DAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNP 586
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L +A RV ++ ++ G + Y + L R +AM +F
Sbjct: 587 DIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLF 646
Query: 404 EKMKTDGHNPDSETYDLLMTKWC 426
+M PD+ TY ++ C
Sbjct: 647 REMLDKSEPPDAITYKIVYRGLC 669
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ +V TFN+LI LCK + AI + M +G P+ETTF +++ + +
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+ ++M G + C RI+QA+S ++ ++G PD TY+ L+
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318
Query: 426 CAHNRVDKANALFDEAVRNGVE 447
C A + D + G++
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLD 340
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 12/281 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L++ R + F + + +G + D + + ++ LC+ G A ++KD +
Sbjct: 300 IDGLLKEDRVNEAFELFSGLVK-HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + +I G C + ++DEA+ L M G +++N + + CR
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL---ICGQCRAGKW- 414
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR---RSEDAIKLFYRMGEWGCHPNE 345
+A +M GV V T+N+L+ LCK R R ++AI LF M E G P+
Sbjct: 415 ---KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 471
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L +A ++ + ++ M++ G Y ++ LCG++++++A+ +F
Sbjct: 472 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVA 531
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M G PD+ TY +++ C VDKA ALFD ++ GV
Sbjct: 532 MVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGV 572
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 120/270 (44%), Gaps = 6/270 (2%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
ID L +AGR L + M+ + G D S V+ LC+ AE L+ A
Sbjct: 335 IDGLCKAGRVEDALLMLKDMD-EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ + LI G C GK +A +EM + G + V YN ++D LC+ +
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD---GLCKARQEG 450
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+ EA + M G +V T++ LI L K + +DA +L M GC PN T+
Sbjct: 451 RI-KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 509
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L +V E E+ M G Y ++ LC E +++A+++F+
Sbjct: 510 NSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLE 569
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
G P S Y L+ CA RVD+A L
Sbjct: 570 AGVVPTSGMYFSLIDGLCAVARVDEALKLL 599
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 10/281 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVD-GKLDEAKRLAREMYRGG 263
+V LC+NG A L+ D P+ LI G C + +L+ A++L +M G
Sbjct: 196 LVNGLCKNGRVDEARMLIVDKG--FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNG 253
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V+YN + + L R++ SEA K+ + G V T+N+LI L K
Sbjct: 254 CKPDIVSYNAL---IHGLAREQGV----SEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R +A +LF + + G P+ T+ V I L +A RV + M+ M G +
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC +R+++A + M+ G +P++ +++ L+ C + KA F E ++
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426
Query: 444 NGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRR 484
GV+ Y + L K + K+ TL + M K R
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 467
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 12/260 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLA 256
D + + + LC A+ + F ++I + L+ G C G++ +A+ L
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M + G+ V YN +L K+ + + ++ A K G +V T+N L
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVK-------RGFVPDVVTYNAL 161
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ CK + ++A ++ RM P+ T+ L+ L + RV E +I G+
Sbjct: 162 INGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGF 218
Query: 377 AIGKKDYYEFLTRLC-GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ Y ++ LC + R+E A + EKM +G PD +Y+ L+ V +A
Sbjct: 219 SPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEAL 278
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
LF +R G E + Y +
Sbjct: 279 KLFGSVLRQGYEPEVPTYNI 298
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 19/198 (9%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++ TFN+ IS LC+ R DA +F M + G PN T+ L+ L R+ + +
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+RM AGY+ Y L C + ++++A+ +F+ G PD TY+ L+ +C
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 429 NRVDKANALFDEAVRNG-----------VEVKPKEYRVDPRYLKKPIAVKKG-----KKR 472
+++D+A + V V K RVD + + V KG
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDE---ARMLIVDKGFSPNVITY 225
Query: 473 ETLPEKMARKRRRLKQIR 490
TL + R+ RRL+ R
Sbjct: 226 STLISGLCRELRRLESAR 243
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 10/209 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF-ELGTVAYNCILDCVSKLCRKKDPFR 289
PD +L++ GK+++A R ++ G ++ T +N +S LCR R
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIST--FNIY---ISGLCRAS---R 65
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ +A+ V M +G N T+N L+S LC R DA L+ RM + G P+ T+
Sbjct: 66 I-GDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYN 124
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
L+ + ++ E ++ D G+ Y + C +++++A + ++M ++
Sbjct: 125 TLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE 184
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALF 438
PD TY+ L+ C + RVD+A L
Sbjct: 185 SLVPDVVTYNSLVNGLCKNGRVDEARMLI 213
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 15/262 (5%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCV 245
++++ R Y D ++ +++ L ++G A + V+ + D ++ I G C
Sbjct: 5 YDKLVRIY--SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCR 62
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
++ +A+ + M + GF + YN +L S LC + R+ S+A+ + M G
Sbjct: 63 ASRIGDAQTVFDGMRKHGFWPNRITYNALL---SGLC---NGGRM-SDAQALYERMIKAG 115
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+V T+N L+ CK+ + ++A+K+F + G P+ T+ LI +A ++ E
Sbjct: 116 YSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQ 175
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA-MSVFEKMKTDGHNPDSETYDLLMTK 424
++ RM S Y + LC R+++A M + +K G +P+ TY L++
Sbjct: 176 RILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK----GFSPNVITYSTLISG 231
Query: 425 WCAH-NRVDKANALFDEAVRNG 445
C R++ A L ++ V NG
Sbjct: 232 LCRELRRLESARQLLEKMVLNG 253
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 151/344 (43%), Gaps = 21/344 (6%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ D + ++ V T +S +D L GR + R+ + YG K D + V++ L
Sbjct: 413 VVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGL 471
Query: 210 CENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C AE+L+ + ++ PD+ + ++ C G +D A R+ +M G
Sbjct: 472 CSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDI 531
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V YNCI+D LC + +A ++L D++ G ++ TFN L+ LC + R ED
Sbjct: 532 VTYNCIID---GLCNES----CIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWED 584
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A +L M C P+E TF +I SL Q + + E + M G Y +
Sbjct: 585 AEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVD 644
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
L + + A+ + M T+G PD TY+ +++ ++++A L V NG+
Sbjct: 645 ALLKAGKAQAALELLSGM-TNG-TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCP 702
Query: 449 KPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLS 492
YR ++ G RE ++ R RR++ LS
Sbjct: 703 DTTTYR----------SLAYGVCREDGTDRAVRMLRRVQDTGLS 736
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 13/278 (4%)
Query: 173 LVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVKDTAN 227
L+RA GR L F+ M G + ++++ C E+GY L + A
Sbjct: 257 LIRALCVRGRIPDALAVFDDMLH-RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 315
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
PD ++LI C +G +DEA + + G + V Y +L + R K
Sbjct: 316 GCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWK-- 373
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
E E++L +M N + TFN ++++LC+ + AI++ M E GC + T
Sbjct: 374 -----EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ ++ L RV + E++ R+KS G Y L LC E+ E+A + +M
Sbjct: 429 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEML 488
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD T++ ++ C VD+A + ++ NG
Sbjct: 489 CSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENG 526
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 134/335 (40%), Gaps = 35/335 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
I+ + G + L + +G K D + V++ LC + E+L+ + T+N
Sbjct: 328 INAMCNEGDVDEALNILSNLP-SHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNN 386
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD+ + ++ C G +D A + M G V Y+ ILD + + R D
Sbjct: 387 CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAV 446
Query: 289 RLDSE----------------------------AEKVLLDMEYNGVPRNVETFNVLISNL 320
L S AE+++ +M + P + TFN ++++L
Sbjct: 447 ELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASL 506
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C+ + AI++ +M E GC P+ T+ +I L + + + E++ ++S G
Sbjct: 507 CQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDI 566
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ L LCG++R E A + M PD T++ ++T C + +A
Sbjct: 567 VTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKI 626
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
NG Y + L +K GK + L
Sbjct: 627 MAENGCVPNSSTYSIVVDAL-----LKAGKAQAAL 656
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 132/311 (42%), Gaps = 18/311 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I RL GR + ER+ G + +V C G A +L+
Sbjct: 194 IKRLCSDGRVSDA----ERVFAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP--- 246
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
FP D + LI+ CV G++ +A + +M G V Y+ +LD K+ +
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATC----KESGY 302
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R +A +L +M G ++ T+NVLI+ +C ++A+ + + GC P+ T+
Sbjct: 303 R---QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTY 359
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++KSL + R E +E++ M S A + + +T LC +++A+ V + M
Sbjct: 360 TPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSE 419
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
G D TY ++ C RVD A L G + Y LK + ++
Sbjct: 420 HGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT---VLKGLCSTEQ 476
Query: 469 GKKRETLPEKM 479
++ E L +M
Sbjct: 477 WERAEELMAEM 487
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 9/281 (3%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R K+ + + + N T + + L + G + + + M ++G D +
Sbjct: 371 RWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMS-EHGCVADIVTY 429
Query: 203 RLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+ G A E L + + PD ++KG C + + A+ L EM
Sbjct: 430 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLC 489
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
V +N + V+ LC+K L A +V+ M NG ++ T+N +I LC
Sbjct: 490 SDCPPDEVTFNTV---VASLCQKG----LVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+DA++L + GC P+ TF L+K L R + ++++ M + +
Sbjct: 543 NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDEL 602
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ +T LC + QA+ + M +G P+S TY +++
Sbjct: 603 TFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVV 643
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C++LIK C DG++ +A+R+ + G V YN +++ + R +D RL
Sbjct: 190 CNILIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRL----- 241
Query: 296 KVLLDMEYNGVP--RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
NG+P + TFN LI LC R DA+ +F M GC P+ T+ +L+
Sbjct: 242 -------INGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLD 294
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ + + + ++D M++ G Y + +C +++A+++ + + G P
Sbjct: 295 ATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKP 354
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
D+ TY ++ C R + L E N
Sbjct: 355 DAVTYTPVLKSLCGSERWKEVEELLAEMTSN 385
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 10/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G K D + +++ LC AE+L+ + P D++ + +I C G L +A
Sbjct: 561 GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQA 620
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ M G + Y+ ++D + K + ++A LL NG P ++ T
Sbjct: 621 IETLKIMAENGCVPNSSTYSIVVDALLKAGK--------AQAALELLSGMTNGTP-DLIT 671
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +ISNL K + E+A+ L M G P+ TT+ L + + M+ R++
Sbjct: 672 YNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQ 731
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G + Y + L C R + A+ F M + G PD TY +L+ +D
Sbjct: 732 DTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLD 791
Query: 433 KANALFDEAVRNGV 446
+A L GV
Sbjct: 792 EAKRLLASLCSLGV 805
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 297 VLLDMEYNGVPRN---VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET--TFLVL 351
VL D +G RN V N+LI LC R DA ++F +G P+ T T+ +
Sbjct: 171 VLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALG-----PSATVVTYNTM 225
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ +A R+ + +I+ M + + + LC RI A++VF+ M G
Sbjct: 226 VNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGC 282
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+P TY +L+ C + +A AL DE G E Y V
Sbjct: 283 SPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNV 326
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 154/364 (42%), Gaps = 12/364 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+ LV+ L + F W + F +D++ D G F + DFL+
Sbjct: 80 STDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLI 139
Query: 156 DNKE----VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ +E V+ + RA P + F RM ++G + D L ++ LC+
Sbjct: 140 EIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMG-EFGIRAGVDDLDKLLYTLCK 198
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
+ ++A++ + P K +L +GW V G + A+++ EM G + +AY
Sbjct: 199 RKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAY 258
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N +L+ + K ++ EA K+ L+M+ NGV + +T+++ I + C+ +
Sbjct: 259 NSLLEALCKGGKR-------DEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYR 311
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+ R PN T+ +IK L + V E +++D M G Y C
Sbjct: 312 VLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHC 371
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+ A+++ ++M D PD TY++++ R D+AN +++ + G
Sbjct: 372 DHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVS 431
Query: 452 EYRV 455
Y V
Sbjct: 432 TYAV 435
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 14/279 (5%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLV--KDTANEIFPDDKICDLLIK 241
FF +R GF+ DS +VV+ L +G +A + L+ ++T + + + L
Sbjct: 101 FFLWAKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHE----LFWH 156
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD-CVSKLCRKKDPFRLDSEAEKVLLD 300
+ + D + R R G E G A LD + LC++K + A++
Sbjct: 157 VFTAYSRADLPQDAIRAFNRMG-EFGIRAGVDDLDKLLYTLCKRKHV----AHAQQFFDK 211
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
++ P +V+T+++L + S +A K+F M E GC + + L+++L + +
Sbjct: 212 VKSVFNP-SVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGK 270
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E +M M S G Y F+ C + V E+ K P+ TY+
Sbjct: 271 RDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNC 330
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
++ K C V++A + DE + GV Y Y
Sbjct: 331 VIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAY 369
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 9/320 (2%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLV--DNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
+ + D + + F A ++ D+K G T I RL+ +GR Q + F+ +E
Sbjct: 104 SYNILLDILAKVRQFDAAWHLILQMDHK---GTDTFLLLIRRLISSGRTRQAIRAFDDIE 160
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLD 250
G K D +++ LC+ GY A ++ E D KI +LI GWC G+ +
Sbjct: 161 GLTGNKVGIDDFCYLLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILIYGWCKIGRFE 220
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS---EAEKVLLDMEYNGVP 307
A+R ++M G E V YN +L+ V + R + AEKV +M G+
Sbjct: 221 MAERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIE 280
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
+V +F++++ + + E ++ +M E G P T+ +IK L R+ +G+ +
Sbjct: 281 PDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENL 340
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWC 426
I+ M +G + Y F G + A+ +++KM+ D P TY++L+ +
Sbjct: 341 IEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFL 400
Query: 427 AHNRVDKANALFDEAVRNGV 446
++ + L+++ +GV
Sbjct: 401 NLDKKETLKELWNDMKESGV 420
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 288 FRLDSEAEKVLLDMEY-NGVPRN---VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RL ++ L +Y N +P N ++N+L+ L K+R+ + A L +M H
Sbjct: 76 LRLTHHSKIALSFFDYANSLPSNPISTTSYNILLDILAKVRQFDAAWHLILQMD----HK 131
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
TFL+LI+ L + R + D ++ G +G D+ L LC ++ A+ V
Sbjct: 132 GTDTFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGIDDFCYLLDVLCKYGYVKVAVEV 191
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
F K K + D + Y +L+ WC R + A + V G+E Y V
Sbjct: 192 FNKRKEE-FGVDVKIYTILIYGWCKIGRFEMAERFLKDMVERGIEPNVVTYNV 243
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK------SLYQAAR-- 360
+V+ + +LI CKI R E A + M E G PN T+ VL+ SL+ R
Sbjct: 202 DVKIYTILIYGWCKIGRFEMAERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFE 261
Query: 361 --VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ +++ D M+ G + L + E ++ ++MK G +P TY
Sbjct: 262 KTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATY 321
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
++ C+ R++ L +E VR+G+ P Y
Sbjct: 322 TSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTY 356
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 31/150 (20%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL-------DCVSKLCRKKDPFRLD 291
+IK C G+L++ + L EM R G YNC D L R R D
Sbjct: 324 VIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGAL-RLYKKMRED 382
Query: 292 S------EAEKVLL-----------------DMEYNGVPRNVETFNVLISNLCKIRRSED 328
+LL DM+ +GV +++++ +I LC+ +R +
Sbjct: 383 CLCAPSLHTYNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSE 442
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
A + F M E G P + TF +L + L Q+
Sbjct: 443 ACQFFVEMIERGFLPQKVTFEMLYRGLIQS 472
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 157/365 (43%), Gaps = 54/365 (14%)
Query: 141 FGRRKDFKAIHDFLVD---NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
G+ + F+ + LV+ KE++ +T + ++R A + + + F R +++G +
Sbjct: 171 LGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISIFYR-RQEFGLEM 229
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ + + ++ LC + AE L +E D K ++++ GWCV G + EAKR R
Sbjct: 230 NLIAFQSLLMWLCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWCVLGNVHEAKRFWR 289
Query: 258 E-----------------------------------MYRGGFELGTVAYNCILDCVSKLC 282
E M+ G V NCI+D LC
Sbjct: 290 EIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDA---LC 346
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE--WG 340
KK R+ EA ++ +M G NV T+N LI +LCKIRR E +L M E
Sbjct: 347 FKK---RI-PEALEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGS 402
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI-EQA 399
C PN TF+ L+ S+ V + RM+ +G + D Y + RL I E+
Sbjct: 403 CWPNSVTFIYLLGSVRGPEEV---PVLFQRMERSGCKM-TSDIYNLILRLYMDWDIQERV 458
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK-EYRVDPR 458
S + +MK G PD +Y +++ R F+E G+ +PK E V+
Sbjct: 459 KSTWNEMKEMGLGPDRRSYTIMIHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTEKLVNAT 518
Query: 459 YLKKP 463
+K+P
Sbjct: 519 NVKEP 523
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T S I L + G + + ++M RD + + ++ LC+ A +L +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDC--SPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 224 D-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
T+ I PD + LI+G C+ A L EM G E YN ++D LC
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID---SLC 446
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
K +LD EA +L ME +G R+V T+N LI CK ++ +A ++F M G
Sbjct: 447 SKG---KLD-EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N T+ LI L ++ RV + +++D+M G K Y LT C I++A +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ M ++G PD TY L++ C RV+ A+ L G+ + P Y
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 136/327 (41%), Gaps = 47/327 (14%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
KT + + + G L E+M ++G S+ ++V C+ G A ++
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQM-VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 224 DTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ +N+ FPD + L+ G C G + A + M + G++ YN ++ + KL
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED------------- 328
K EA +VL M N T+N LIS LCK + E+
Sbjct: 344 GEVK-------EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 329 ----------------------AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
A++LF M GC P+E T+ +LI SL ++ E
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
M+ +M+ +G A Y + C + +A +F++M+ G + +S TY+ L+ C
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEY 453
RV+ A L D+ + G KP +Y
Sbjct: 517 KSRRVEDAAQLMDQMIMEG--QKPDKY 541
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 143/346 (41%), Gaps = 56/346 (16%)
Query: 125 ANFSHTDETLS---FFTDYFGRRKD---FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGR 178
A F DE LS + D FG + D + + + LVD + +LV
Sbjct: 129 AQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL-----------KLVEISH 177
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICD 237
+ +G K D + ++++ LC A +++D + + PD+K
Sbjct: 178 AKMSV---------WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE---- 293
+++G+ +G LD A R+ +M G V+ N I+ K R +D E
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 294 -------------------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
A +++ M G +V T+N +IS LCK+ ++
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+++ +M C PN T+ LI +L + +V E E+ + S G + +
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
LC AM +FE+M++ G PD TY++L+ C+ ++D+A
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 139/313 (44%), Gaps = 13/313 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + + D + V T + ID ++GR LG ME++ G D +
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQN-GCNPDDWT 356
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ LC G AE+L+ F I LI G+C ++D+A R+ M
Sbjct: 357 YNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L AY +++ + K CR K EA++ L +M NG+ NV T+ +I
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLK-------EAKETLNEMFANGLAPNVVTYTSIIDGY 468
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK+ A+++F M GCHPN T+ LI L Q ++ + +I +M+ G G
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGV 528
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C + A +FE M+ +G PD + Y++L C R ++A +
Sbjct: 529 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL-- 586
Query: 441 AVRNGVEVKPKEY 453
VR GV + Y
Sbjct: 587 -VRKGVVLTKVTY 598
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 9/230 (3%)
Query: 217 YAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
Y KL E + PD + +I +C G L A R + G ++ T N +L
Sbjct: 162 YMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALL 221
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
CR D +A +L+ M G RN ++ +LI LC+ R +A+ L +
Sbjct: 222 ---LGYCRTSDL----RKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFM 274
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M GC N T+ +LIK L + R+ + ++D M G Y + C R
Sbjct: 275 MVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGR 334
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++ A+ + M+ +G NPD TY+ L+ C ++D+A L + A+ G
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG 383
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 124/292 (42%), Gaps = 12/292 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T S ID + G L F+ ME + G + + ++ L ++ A L+ K
Sbjct: 460 TYTSIIDGYCKVGMVGAALEVFKLMEHE-GCHPNAWTYGSLIYGLIQDKKLHKAMALITK 518
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I P LI+G C + D A RL M + G AYN + D + K R
Sbjct: 519 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 578
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ + + GV T+ L+ K ++ A L +M GC
Sbjct: 579 AEEAYSF----------LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKA 628
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ VL+++L + ++ E ++D+M +G Y ++ + + + A S+F
Sbjct: 629 DLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLF 688
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M + GH P + TY + ++ +C R+++A L E R+GV Y +
Sbjct: 689 NEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNI 740
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 138/341 (40%), Gaps = 25/341 (7%)
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
++ + TD + + + FLV VL T S +D +AG E+M
Sbjct: 563 EQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKL 249
+ G K D + ++++ LC+ + A ++ T + + + ++I +GK
Sbjct: 623 NE-GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKH 681
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
D AK L EM G + Y + K+ R + EAE ++ +ME +GV +
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIE-------EAEHLIGEMERDGVTPD 734
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK-----SLYQAARVGEG 364
V T+N+ I+ + + A RM + C PN T+ +L+K SL A V
Sbjct: 735 VVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTS 794
Query: 365 D-----------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
++++RM G Y + C R+E+A + + M +P
Sbjct: 795 GMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISP 854
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ E Y +L+ C KA + + + G + + + Y
Sbjct: 855 NEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYH 895
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 16/286 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L++ + + + +M+ D G + +++ C+ A +L +
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQED-GITPGVITYTTLIQGQCKKHEFDNAFRLFEM 553
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + PD++ ++L C G+ +EA + R G L V Y ++D SK
Sbjct: 554 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSK--- 607
Query: 284 KKDPFRLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+++ VL++ N G ++ T++VL+ LCK ++ +A+ + +M G
Sbjct: 608 -----AGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK 662
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N + ++I + + + + + M S+G+ Y F++ C I RIE+A +
Sbjct: 663 CNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHL 722
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAH-NRVDKANALFDEAVRNGVE 447
+M+ DG PD TY++ + C H +D+A + V E
Sbjct: 723 IGEMERDGVTPDVVTYNIFING-CGHMGYIDRAFSTLKRMVDASCE 767
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 119/324 (36%), Gaps = 57/324 (17%)
Query: 161 LGPKTLASCIDRLVRAG----RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
L P A+ + L RA P L FFE + R GF+ S +A+
Sbjct: 44 LSPSVTAAHVADLFRAPVSPLDPATALAFFECVARRPGFRHTAAS------------HAA 91
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
+ L + A + DK+ +I + EA + + R G + ++ C
Sbjct: 92 LLQLLARRRAPANY--DKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNL 149
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK-------------I 323
+ L R F + K+ + G+ + T+N +I CK +
Sbjct: 150 ALRSLLR----FDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLL 205
Query: 324 RRSE--------DAIKLFY------RMGEW--------GCHPNETTFLVLIKSLYQAARV 361
R S +A+ L Y R W GC NE ++ +LI+ L +A V
Sbjct: 206 RESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCV 265
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E ++ M G ++ Y + LC RI A + ++M G P TY+ +
Sbjct: 266 REALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAM 325
Query: 422 MTKWCAHNRVDKANALFDEAVRNG 445
+ +C R+ A + +NG
Sbjct: 326 IDGYCKSGRMKDALGIKALMEQNG 349
>gi|357440157|ref|XP_003590356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479404|gb|AES60607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 118
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
Query: 363 EGDEMIDRMKSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+GD MID KSAGY + KK Y++FL LCG+ERI+ A+ + MK DG PD +TYD
Sbjct: 8 QGDAMIDGTKSAGYGAFLDKKAYFDFLI-LCGVERIDHALKISTMMKADGCEPDVKTYDF 66
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
LM K AH+RVDK N+L +EA G +V PKEY VDPR+ KK
Sbjct: 67 LMKKLGAHDRVDKVNSLSNEACSRGFDVTPKEYVVDPRFSKK 108
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 135/278 (48%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I G + LG F MER+ G + + +++ C+ G A L+K +++
Sbjct: 221 IRGFCSVGELQKGLGCFGEMERN-GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 279
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ I +++I G C +G + EA + EM GF V YN +L+ C++ + F
Sbjct: 280 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN---GYCKEGN-F 335
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A + +M NGV +V T+ LI+++CK R A++ F +M G PNE T+
Sbjct: 336 H---QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 392
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + E +++ M +G++ Y F+ C +ER+E+A+ V ++M
Sbjct: 393 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 452
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PD +Y +++ +C +D+A + E V GV
Sbjct: 453 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 138/336 (41%), Gaps = 30/336 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + GR + G + M G + + S +++ LC G A +++++
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYNVIINGLCREGSMKEAWEILEE 309
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK--- 280
+ F PD+ + L+ G+C +G +A + EM R G V Y +++ + K
Sbjct: 310 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 369
Query: 281 LCRKKDPF-------------------------RLDSEAEKVLLDMEYNGVPRNVETFNV 315
L R + F L +EA ++L +M +G +V T+N
Sbjct: 370 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 429
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
I C + R E+A+ + M E G P+ ++ +I + + +M M G
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ Y + LC + R+ +A + ++M G PD TY L+ +C ++KA
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
L DE + G Y V L K ++ K+
Sbjct: 550 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 5/227 (2%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ +KD+ + + DL++K + +D+A GF G ++YN +LD +
Sbjct: 129 QCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAI- 187
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
R + +L AE+V +M + V NV T+N+LI C + + + F M
Sbjct: 188 --VRSRGSVKLS--AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERN 243
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
GC PN T+ LI + + R+ E ++ M S G Y + LC +++A
Sbjct: 244 GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEA 303
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ E+M G PD TY+ L+ +C +A + E VRNGV
Sbjct: 304 WEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV 350
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 9/275 (3%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
IH +V N T + I+ + +A + + FF++M R G + ++ + +++
Sbjct: 340 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIRGLRPNERTYTTLIDG 398
Query: 209 LCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
G + A +++ + F P + I G CV +++EA + +EM G
Sbjct: 399 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 458
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V+Y+ I +S CRK + R A ++ +M GV + T++ LI LC++RR
Sbjct: 459 VVSYSTI---ISGFCRKGELDR----AFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A L M + G P+E T+ LI + + + + D M G+ Y +
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
L R +A + K+ + P TYD L+
Sbjct: 572 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 61/294 (20%)
Query: 180 TQVLGFFERMERDYGFKR-----------DKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
T + GF + E D F+ D + +++ LCE + A L ++ +
Sbjct: 464 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 523
Query: 229 IFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P D+ LI +CV+G L++A L EM GF V Y+ +++ ++K R ++
Sbjct: 524 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583
Query: 288 ----FRLDSEAEKVLLDMEYNGVPRNVE-------------------------------- 311
F+L E E V D+ Y+ + N
Sbjct: 584 KRLLFKLIYE-ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 642
Query: 312 --------TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+NV+I C+ A L+ M G P+ T + LIK+L++ E
Sbjct: 643 RNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 702
Query: 364 GDEMI-DRMKSAGYAIGKKDYYEFLTRLCGIE-RIEQAMSVFEKMKTDGHNPDS 415
E+I D ++S + + + + L + E +E ++V M DG P+S
Sbjct: 703 MSEVIGDTLRSC--RLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPNS 754
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 34/369 (9%)
Query: 88 LIFSHVTP-TPSLVQSTLNFSPEAGRAILGFNHWL-TQNANFSHTDETLSFFTDYFGRRK 145
++ + TP TP+LV S L G L F H+L + + H + D R
Sbjct: 44 ILSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLH 103
Query: 146 DFKAIHDFLVDNKEV-LGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+ + + + +GP KT A +R +G+P + + F M ++G +D S
Sbjct: 104 IHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMH-EHGCFQDLASF 162
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ LC++ A +L + D ++++ GWC+ + +A + +EM
Sbjct: 163 NTILDVLCKSKRVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDR 222
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK-------------------------- 296
G YN +L + + + + E +K
Sbjct: 223 GINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRT 282
Query: 297 --VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
V +M GV +V T+N I LCK E+A+ +F M G PN TT+ VLI+
Sbjct: 283 RNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRG 342
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L+ A + G+E++ RM++ G + Y + +E+A+ +FEKM T P+
Sbjct: 343 LFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPN 402
Query: 415 SETYDLLMT 423
+TY++L++
Sbjct: 403 LDTYNILIS 411
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 82/204 (40%), Gaps = 23/204 (11%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + RAG+ Q FF M K+ + +V +G+ E +K
Sbjct: 230 TYNTMLQGFFRAGQIRQAWEFFLEM------KKRNCEIDVVTYTTVVHGFGVAGE--IKR 281
Query: 225 TAN--------EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
T N + P + I+ C ++ A + EM R G+E YN ++
Sbjct: 282 TRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIR 341
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ + S E+++ ME G N +T+N++I + E A+ LF +M
Sbjct: 342 GLFHAGK-------FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 394
Query: 337 GEWGCHPNETTFLVLIKSLYQAAR 360
G C PN T+ +LI ++ R
Sbjct: 395 GTGDCLPNLDTYNILISGMFVRKR 418
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 170/414 (41%), Gaps = 30/414 (7%)
Query: 50 TSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPE 109
+S+P+ + IA ++ NLEA +S L + +LV + L+
Sbjct: 166 SSHPEHVGRVCAAIADVMAAGADANLEATLSALSPPL---------SEALVLAVLDRFKH 216
Query: 110 AGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASC 169
A R F W + F HT T G+ + F+ +V + +G K A C
Sbjct: 217 AHRPSRRFFQWAAASDEFEHTPVTYCKMLHILGKARQFET----MVALVQEMG-KAGALC 271
Query: 170 ID-------RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
+D AG +G FE M R +GF +S ++ L + G A ++
Sbjct: 272 MDAFKIAIKSFAAAGEIKNAVGVFEMM-RVHGFDDGVESFNCLLVALAQEGLGKEAARVF 330
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
++ PD + L+ WC L EA R+ +M G + V +N ++D + +
Sbjct: 331 DRMRDQYTPDLRSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQ 390
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R+ EA K+ M+ G P NV T+ +LI + CK + + A++ F M GC
Sbjct: 391 RR-------PEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQ 443
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P T+ L+ A R+ M++ M G + Y + L + A+ +
Sbjct: 444 PEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRI 503
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNR-VDKANALFDEAVRNGVEVKPKEYRV 455
++KM T G P TY+++M + R A+++E R G+ Y V
Sbjct: 504 YKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTV 557
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 141/301 (46%), Gaps = 18/301 (5%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I+ L + G + F +ME++ G K + + +++ LC++ + A + + + +
Sbjct: 206 TVINGLCKNGNTIMAVRVFRKMEQNRG-KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVD 264
Query: 228 EIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
P D + + ++ G+C G+L+EA RL +EM TV +N ++D LC++
Sbjct: 265 RGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD---GLCKEG- 320
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+ SEA V M G N T+N L+ C + ++AIK+ M GC PN +
Sbjct: 321 ---MVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLS 377
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
++ +LI ++ R+ E ++ M Y + LC + R +A+++F++M
Sbjct: 378 SYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEM 437
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
+ G PD Y +L+ +C H +D+A L E E R+ P + I +
Sbjct: 438 CSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM---------HERRIKPNIILYTILI 488
Query: 467 K 467
+
Sbjct: 489 R 489
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 8/264 (3%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDE 251
+G + SL +++ LC + +A ++ K I PD + LI G C +GK+ E
Sbjct: 125 FGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKE 184
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L EM G E ++YN + ++ LC+ + A +V ME N NV
Sbjct: 185 AVGLFNEMVWSGHEPNVISYNTV---INGLCKNGNTIM----AVRVFRKMEQNRGKPNVV 237
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N +I +LCK R +A++ M + G P+ T+ ++ ++ E + M
Sbjct: 238 TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ + LC + +A V E M G P++ TY+ LM +C HN++
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQM 357
Query: 432 DKANALFDEAVRNGVEVKPKEYRV 455
D+A + + G Y +
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNI 381
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 128/297 (43%), Gaps = 18/297 (6%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TAN 227
C DRLV + + F M D G D + ++ C G + A +L K+
Sbjct: 247 CKDRLVN-----EAVEFLSEM-VDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR 300
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKK 285
+ PD ++L+ G C +G + EA+ ++ M G E YN ++D C+
Sbjct: 301 NVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHN----- 355
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
++D EA KVL M G N+ ++N+LI+ CK +R +A +L M E P+
Sbjct: 356 ---QMD-EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDT 411
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ L++ L Q R E + M S+G Y L C +++A+ + ++
Sbjct: 412 VTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
M P+ Y +L+ +++ A LF + +G+ Y V + L K
Sbjct: 472 MHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLK 528
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++LI G+C +++EAKRL EM TV Y+ ++ + ++ R ++ L E
Sbjct: 380 NILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE--- 436
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
M +G+ ++ +++L+ CK ++A+KL M E PN + +LI+ ++
Sbjct: 437 ----MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEKMKTDGHNP 413
A ++ E+ ++ + G + D + + + G+ + ++A F KM+ DG P
Sbjct: 493 IAGKLEVAKELFSKLSADGI---RPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAV 442
DS +Y++++ + + A L DE V
Sbjct: 550 DSCSYNVIIQGFLQNQDSSTAIQLIDEMV 578
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%)
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A + M+ GV NV + NVLI+ LC++ + A+ + +M + G P+ TF L
Sbjct: 113 SSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTL 172
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L ++ E + + M +G+ Y + LC A+ VF KM+ +
Sbjct: 173 INGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG 232
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P+ TY+ ++ C V++A E V G+
Sbjct: 233 KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGI 267
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 8/230 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + S +++ C++ + A++L+ + + + + PD L++G C G+ EA
Sbjct: 371 GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREA 430
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L +EM G +AY+ +LD C+ LD EA K+L +M + N+
Sbjct: 431 LNLFKEMCSSGLLPDLMAYSILLD---GFCKHG---HLD-EALKLLKEMHERRIKPNIIL 483
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +LI + + E A +LF ++ G P+ T+ V+IK L + E E +M+
Sbjct: 484 YTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKME 543
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
G+ Y + + A+ + ++M + DS T+ +L+
Sbjct: 544 DDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+DA+ FYRM P+ F + S+ + + + ++M G
Sbjct: 78 DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LC + ++ A+SV KM G PD+ T++ L+ C ++ +A LF+E V +G
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197
Query: 447 EVKPKEY 453
E Y
Sbjct: 198 EPNVISY 204
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 154/364 (42%), Gaps = 12/364 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+ LV+ L + F W + F +D++ D G F + DFL+
Sbjct: 80 STDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGGSGQFAILWDFLI 139
Query: 156 DNKE----VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ +E V+ + RA P + F RM ++G + D L ++ LC+
Sbjct: 140 EIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMG-EFGIRAGVDDLDKLLYTLCK 198
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
+ ++A++ + P K +L +GW V G + A+++ EM G + +AY
Sbjct: 199 RKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAY 258
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N +L+ + K ++ EA K+ L+M+ NGV + +T+++ I + C+ +
Sbjct: 259 NSLLEALCKGGKR-------DEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYR 311
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+ R PN T+ +IK L + V E +++D M G Y C
Sbjct: 312 VLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHC 371
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+ A+++ ++M D PD TY++++ R D+AN +++ + G
Sbjct: 372 DHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVS 431
Query: 452 EYRV 455
Y V
Sbjct: 432 TYAV 435
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V+T+++L + S +A K+F M E GC + + L+++L + + E +M
Sbjct: 219 SVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMF 278
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M S G Y F+ C + V E+ K P+ TY+ ++ K C
Sbjct: 279 LEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKD 338
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
V++A + DE + GV Y Y
Sbjct: 339 QNVEEAYQILDEMIERGVTPDTWSYNAIQAY 369
>gi|326500578|dbj|BAK06378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 127/288 (44%), Gaps = 17/288 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYG-FKRDKDS-------LRLVVEKLCENGYASYAEKL 221
+ R R GR + L F + R+ + D D+ L + V LC+ G+ A KL
Sbjct: 118 VRRYARLGRSSAALRAFHFLRRNPDRYTVDGDASPAATSLLNMAVGALCKEGHPRPAAKL 177
Query: 222 VKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
VK E+ PD++ ++L+ GW ++D+ +L EM G V+Y ++ V
Sbjct: 178 VKRCRREGELAPDERTYNMLLDGWSTARRMDKVGKLWAEMCVAGVRPTVVSYGTLIKAV- 236
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
CR + P +A +L +M G+ N+ T N ++ L R DA L + +
Sbjct: 237 --CRVQQP----DQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGRFRDAYNLLEKFPLY 290
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G PN +TF L+ + + + ++ M G K Y F +E
Sbjct: 291 GVAPNISTFNSLVLAYCKYGDLAGASGVLKAMMGRGILPTAKTYNYFFVFFAKTGNVELG 350
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M+++ KM +G+ PD TY+LL+ C NR++ + E NG E
Sbjct: 351 MNLYNKMVNNGYAPDQTTYNLLVKMLCEANRLELVVQMIKEMRANGFE 398
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 12/216 (5%)
Query: 166 LASC---IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
L +C + L AGR E+ YG + + +V C+ G + A ++
Sbjct: 261 LVTCNPIVHALAHAGRFRDAYNLLEKFPL-YGVAPNISTFNSLVLAYCKYGDLAGASGVL 319
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
K I P K + + G ++ L +M G+ YN + V L
Sbjct: 320 KAMMGRGILPTAKTYNYFFVFFAKTGNVELGMNLYNKMVNNGYAPDQTTYNLL---VKML 376
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C RL+ + ++ +M NG ++ T +LI LC+ R E+A F M G
Sbjct: 377 CEAN---RLELVVQ-MIKEMRANGFESDLATSTMLIHLLCRSHRFEEACAEFKDMFRRGH 432
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
P T+ +L+K L + V +++ D M+S ++
Sbjct: 433 VPQYITYRMLMKELKRLGLVELEEKLTDLMRSVPHS 468
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 45/327 (13%)
Query: 159 EVLGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
+V GP + + ++ VR GR + F + G+ D + +V LC+ G
Sbjct: 340 KVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFG 399
Query: 217 YAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A +LV D A P+ +LI G+C G+L+EA + REM GF L TV YN +
Sbjct: 400 SALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNAL- 458
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+S LC+ EA + +M G ++ TFN LI LC++ EDA+ L+
Sbjct: 459 --ISALCKHGKI----HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRD 512
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M G N TF LI + + + E ++++ M G + + Y + LC
Sbjct: 513 MVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGA 572
Query: 396 IEQAMSVFEKMKTDG---------------------HN--------------PDSETYDL 420
+E+ + +FE+M G HN PD TY+
Sbjct: 573 VEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNS 632
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ C R+ +A LF++ G++
Sbjct: 633 LINGLCKRGRIQEALNLFEKLQAEGIQ 659
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 13/297 (4%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LV++ + G K T ID + G+ + G R GF + ++ L
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA-GLILREMLTKGFSLNTVGYNALISAL 462
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C++G A + + +++ PD + LI G C ++++A L R+M G +
Sbjct: 463 CKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANS 522
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V +N + + R+ + EA K++ DM + G P + T+N LI LCK E
Sbjct: 523 VTFNTL---IHAFLRRGEI----QEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEK 575
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+ LF M G P+ T +LI A +V E + M G++ Y +
Sbjct: 576 GLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLIN 635
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
LC RI++A+++FEK++ +G PDS TY+ L+ C D A L V NG
Sbjct: 636 GLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENG 692
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 12/278 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID L + R + L E M G D ++ V+ C KLV +
Sbjct: 252 IDALSKRDRVDEALKLLEEMFL-MGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKG 310
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F P+D L+ G C ++DEA+ L ++ V +N + V+ R
Sbjct: 311 FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPN----VVHFNTL---VNGFVRNG--- 360
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL+ V M NG +V TF+ L++ LCK A++L M GC PN T+
Sbjct: 361 RLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTY 420
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI + ++ E ++ M + G+++ Y ++ LC +I +A+ +F +M +
Sbjct: 421 TILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSS 480
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PD T++ L+ C + ++ A AL+ + V GV
Sbjct: 481 KGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGV 518
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 127/331 (38%), Gaps = 51/331 (15%)
Query: 120 WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRA 176
W + H+ D G FK I L+ KE V + RA
Sbjct: 93 WAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRA 152
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKI 235
G P Q M+ Y + S +V++ L S A + D ++ + P+D
Sbjct: 153 GLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYT 212
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
L++K C+ ++D A L R+M + G CV
Sbjct: 213 FGLVMKALCMVNEVDNACLLLRDMTKHG-------------CVP---------------- 243
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
N + LI L K R ++A+KL M GC P+ TF +I
Sbjct: 244 -------------NSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGF 290
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ RV EG +++DRM G+ Y + LC RI++A ++ K+ P+
Sbjct: 291 CRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNV 346
Query: 416 ETYDLLMTKWCAHNRVDKANA-LFDEAVRNG 445
++ L+ + + R+++A A ++D+ + NG
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNG 377
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 20/293 (6%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF + + ++ LC+ A+ L+ P+ + L+ G+ +G+L+EA
Sbjct: 310 GFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG---PNVVHFNTLVNGFVRNGRLNEAT 366
Query: 254 RLARE-MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ M G+ ++ + V+ LC+K L A +++ DM+ G N+ T
Sbjct: 367 AFVYDKMINNGYVPDVFTFSTL---VNGLCKKG----LFGSALELVNDMDAKGCKPNLNT 419
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +LI CK + E+A + M G N + LI +L + ++ E +M M
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479
Query: 373 SAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
S G K D + F + LC ++ +E A++++ M +G +S T++ L+ +
Sbjct: 480 SKGC---KPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRG 536
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
+ +A L ++ + G + Y + L K AV+KG L E+M RK
Sbjct: 537 EIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLG---LFEEMIRK 586
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 145 KDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
+D A++ +V + T + I +R G + L M G D+ +
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFR-GCPLDEITYNG 562
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+ G L ++ + + P C++LI G+C GK+ A R+M G
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F V YN +++ + K R + EA + ++ G+ + T+N LI LC+
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQ-------EALNLFEKLQAEGIQPDSITYNTLICWLCRE 675
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+DA L YR E G PN+ T+ +L+
Sbjct: 676 GAFDDACFLLYRGVENGFVPNDVTWNILV 704
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T I L + G + LG FE M R G + +++ C G A + ++D
Sbjct: 559 TYNGLIKALCKTGAVEKGLGLFEEMIRK-GLTPSIITCNILINGFCTAGKVHNALEFMRD 617
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ F PD + LI G C G++ EA L ++ G + ++ YN + + LCR
Sbjct: 618 MIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTL---ICWLCR 674
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ D + +E VP +V T+N+L+ N K SE
Sbjct: 675 EG---AFDDACFLLYRGVENGFVPNDV-TWNILVYNFGKQSNSE 714
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 150/360 (41%), Gaps = 29/360 (8%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA- 149
S V P L++ LN +AG F W + + H+ E + + F A
Sbjct: 100 SGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAV 159
Query: 150 ---IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
I + +N +++ P+ + R A + + + M + +GF+ D+ ++
Sbjct: 160 WGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPK-FGFEPDEYVFGCLL 218
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ LC++G A KL +D + GK+ EAK + +M GFE
Sbjct: 219 DALCKHGSVKDAAKLFEDMRMRV-----------------GKMMEAKYVLVQMNEAGFEP 261
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V Y +L + + D + L L DM G N + VLI LCK+ R
Sbjct: 262 DIVDYTNLLSGYANAGKMADAYDL-------LRDMRRRGFEPNANCYTVLIQALCKVDRM 314
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+A+K+F M + C + T+ L+ + ++ + ++D M G + Y
Sbjct: 315 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHI 374
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ E E+ + + EKM+ ++PD Y++++ C V +A L++E NG+
Sbjct: 375 MVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL 434
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 28/187 (14%)
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA----------- 359
E F VL+ + AI++ M ++G P+E F L+ +L +
Sbjct: 177 ELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFED 236
Query: 360 ---RVG---EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
RVG E ++ +M AG+ DY L+ ++ A + M+ G P
Sbjct: 237 MRMRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 296
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYLKK 462
++ Y +L+ C +R+++A +F E R E Y ++D Y+
Sbjct: 297 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 356
Query: 463 PIAVKKG 469
+KKG
Sbjct: 357 DDMIKKG 363
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L ++ R + F+ M +G DK + +++ L G A AE L+
Sbjct: 467 TFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDA 526
Query: 225 TAN--------------------------------EIFPDDKICDLLIKGWCVDGKLDEA 252
+ E+ PD ++LI G C G ++A
Sbjct: 527 MPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQA 586
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN-GVPRNVE 311
L EM + + + ++D LC+ EA + +LD+ N GVP NV
Sbjct: 587 SALFEEMVAKNLQPDVMTFGALID---GLCKAGQ-----VEAARDILDLMGNLGVPPNVV 638
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N L+ LCK R E+A + M GC P+ T+ L+ +L +A+R + +++ +
Sbjct: 639 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
KS G+ Y + L + EQA++V E+M GH+PD TY+ L+ C +
Sbjct: 699 KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758
Query: 432 DKANAL 437
++A L
Sbjct: 759 EEARRL 764
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 142/316 (44%), Gaps = 20/316 (6%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
GR +A+ D + D P T A CI+ L + G ++ L + RM + DK
Sbjct: 515 GRAGQAEALLDAMPD------PDTYAFNCCINGLSKLGDVSRALQVYNRM-LELELVPDK 567
Query: 200 DSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ +++ C+ G A L ++ A + PD LI G C G+++ A+ +
Sbjct: 568 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 627
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M G V YN + V LC+ R++ EA + L +M +G + T+ L+
Sbjct: 628 MGNLGVPPNVVTYNAL---VHGLCKSG---RIE-EACQFLEEMVSSGCVPDSITYGSLVY 680
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC+ R++DA++L + +G P+ T+ +L+ L+++ + + +++ M G+
Sbjct: 681 ALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHP 740
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN---PDSETYDLLMTKWCAHNRVDKAN 435
Y + LC +E+A + M + P+ TY +L+ C R+D+A
Sbjct: 741 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAR 800
Query: 436 ALFDEAVRNGVEVKPK 451
L E +R +V P
Sbjct: 801 ELIQEMMRKSCDVLPN 816
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 12/277 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D L ++G+ Q + E M G D + +++ LC+ G A +L D ++ +
Sbjct: 714 VDGLWKSGQTEQAITVLEEM-VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRV 772
Query: 230 ----FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL--GTVAYNCILDCVSKLCR 283
P+ +LI G C G++DEA+ L +EM R ++ + YN LD LC
Sbjct: 773 SRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLD---GLC- 828
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K+ E + L D P V TF+ LI LCK ++++A +F M G P
Sbjct: 829 KQSMMAEACELMRSLRDGSLRVSPDTV-TFSTLIDGLCKCGQTDEACNVFDDMIAGGYVP 887
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ VL+ L + ++ MI+ M G Y + C +++A+ +
Sbjct: 888 NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELL 947
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
M + G P+ T++ ++ C ++ +A +FD+
Sbjct: 948 HGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDD 984
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 15/268 (5%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGW 243
F E +ER G D + +++ LC+ G A +L D ++ P+ +LI G
Sbjct: 239 FEELVER--GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGL 296
Query: 244 CVDGKLDEAKRLAREMYRGGFEL--GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
C G++DEA+ L +EM R ++ + YN LD LC++ + +EA +++ +
Sbjct: 297 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD---GLCKQS----MTAEACELMRSL 349
Query: 302 EYNG--VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
V + TF+ LI LCK + ++A +F M G PN T+ L+ L +A
Sbjct: 350 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 409
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
++ MI+ M G Y + C R+++A+ + M + G P+ T++
Sbjct: 410 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 469
Query: 420 LLMTKWCAHNRVDKANALFDE-AVRNGV 446
++ C +R +A +FD+ A+++G+
Sbjct: 470 SIIDGLCKSDRSGEAFQMFDDMALKHGL 497
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 166/406 (40%), Gaps = 39/406 (9%)
Query: 75 LEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILG-----------FNHWLTQ 123
L DP IS+ L + + +L P AIL F W
Sbjct: 44 LAEDPRSISEALESLRPGQSVVAALRGCKGRLHPSVAAAILAQLDGNAELGTQFYDWAAA 103
Query: 124 NANFSHTDETLSFFTDYFGRRKD-FKAIHDFLVDNKEVLGPK------TLASCIDRLVRA 176
F HT + + + + + KAI F + L P+ T ++ + +A
Sbjct: 104 LPGFKHTIFSFNKYLNLLVKSGSPAKAIDLF----RSRLPPRCRPNHFTYSTLLRATYKA 159
Query: 177 GRPTQ-VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TANEIFPDD 233
G + LGFF R+ D + +V++ LC G + A ++ + + + P
Sbjct: 160 GGDVERTLGFFRRIRSSSRSVADYN---IVLQSLCRAGETARALEIFRGEMARDGVAPTI 216
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ +I G C +L L E+ G V YN ++D LC+ D E
Sbjct: 217 VTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLID---SLCKAGDL----EE 269
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH--PNETTFLVL 351
A ++ DM NV T++VLI+ LCK+ R ++A +L M C PN T+
Sbjct: 270 ARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSF 329
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIG--KKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+ L + + E E++ ++ + + + LC +I++A SVF+ M
Sbjct: 330 LDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG 389
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G+ P+ TY+ L+ C +++++A+A+ + V GV Y V
Sbjct: 390 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 435
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 134/295 (45%), Gaps = 18/295 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ L ++GR + F E M G D + +V LC A +LV + +
Sbjct: 644 VHGLCKSGRIEEACQFLEEMVSS-GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++L+ G G+ ++A + EM G V YN ++D LC+ D
Sbjct: 703 WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID---SLCKAGDL- 758
Query: 289 RLDSEAEKVLLDMEYN----GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-- 342
EA ++ DM VP NV T++VLI+ LCK+ R ++A +L M C
Sbjct: 759 ---EEARRLHGDMSSRVSRCCVP-NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVL 814
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG--KKDYYEFLTRLCGIERIEQAM 400
PN T+ + L + + + E E++ ++ + + + LC + ++A
Sbjct: 815 PNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 874
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+VF+ M G+ P+ TY++LM C +++++A+A+ + V GV Y V
Sbjct: 875 NVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 142/327 (43%), Gaps = 21/327 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L +AG+ + M + G + + +V LC++G A + +++
Sbjct: 604 TFGALIDGLCKAGQVEAARDILDLM-GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 662
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ PD L+ C + D+A +L E+ G++ TV YN ++D + K +
Sbjct: 663 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW---G 340
+ +A VL +M G +V T+N LI +LCK E+A +L M
Sbjct: 723 TE-------QAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRC 775
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRM--KSAGYAIGKKDYYEFLTRLCGIERIEQ 398
C PN T+ VLI L + R+ E E+I M KS Y FL LC + +
Sbjct: 776 CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAE 835
Query: 399 AMSVFEKMKTDGH---NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A + ++ DG +PD+ T+ L+ C + D+A +FD+ + G Y V
Sbjct: 836 ACELMRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNV 894
Query: 456 DPRYLKKPIAVKKGKKRETLPEKMARK 482
L K K ++ + E M K
Sbjct: 895 LMNGLCK---TDKMERAHAMIESMVDK 918
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 146/342 (42%), Gaps = 29/342 (8%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
A+ + +VD T + +D +A R + L M G + + +++
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS-RGCTPNVVTFNSIIDG 474
Query: 209 LCENGYASYAEKLVKDTA--NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC++ + A ++ D A + + PD LI G G+ +A+ L M +
Sbjct: 475 LCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DP 530
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
T A+NC ++ +SKL ++ + +L++E VP V TFN+LI+ CK
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNR----MLELEL--VPDKV-TFNILIAGACKAGNF 583
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E A LF M P+ TF LI L +A +V +++D M + G Y
Sbjct: 584 EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 643
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LC RIE+A E+M + G PDS TY L+ C +R D A L E
Sbjct: 644 VHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL----- 698
Query: 447 EVKPKEYRVDPRYLKKPIAV----KKGKKRE--TLPEKMARK 482
K + DP + I V K G+ + T+ E+M K
Sbjct: 699 ----KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGK 736
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 132/316 (41%), Gaps = 50/316 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV------EKLCENGYASYAEKL-- 221
I+ L + GR + + M R + D L ++ + LC+ + A +L
Sbjct: 787 INGLCKVGRIDEARELIQEMMR-----KSCDVLPNIITYNSFLDGLCKQSMMAEACELMR 841
Query: 222 -VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
++D + + PD LI G C G+ DEA + +M GG+ V YN +++
Sbjct: 842 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMN---G 898
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+ R A ++ M GV +V T++VL+ CK ++A++L + M G
Sbjct: 899 LCKTDKMER----AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRG 954
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMK--------------------SAGYA--- 377
C PN TF +I L ++ + GE +M D M G+A
Sbjct: 955 CTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA 1014
Query: 378 ------IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ D Y F + G+ ++ +M PD T+++L+ C
Sbjct: 1015 EVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNF 1074
Query: 432 DKANALFDEAVRNGVE 447
++A+ALF+E V ++
Sbjct: 1075 EQASALFEEMVAKNLQ 1090
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 12/310 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR ++ + +V + V T S + L RA R L + + +G+ D +
Sbjct: 651 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL-KSFGWDPDTVT 709
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++V+ L ++G A ++++ + PD + LI C G L+EA+RL +M
Sbjct: 710 YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769
Query: 261 RGGFEL---GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
V Y+ +++ + K+ R + L E + D V N+ T+N +
Sbjct: 770 SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCD-----VLPNIITYNSFL 824
Query: 318 SNLCKIRRSEDAIKLF--YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LCK +A +L R G P+ TF LI L + + E + D M + G
Sbjct: 825 DGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y Y + LC +++E+A ++ E M G PD TY +L+ +C + VD+A
Sbjct: 885 YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944
Query: 436 ALFDEAVRNG 445
L G
Sbjct: 945 ELLHGMASRG 954
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 77/197 (39%), Gaps = 48/197 (24%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L ++ + + F+ M +G DK + +++ L G+A AE L+
Sbjct: 961 TFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLL-- 1018
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ PD T A+NC ++ +SKL
Sbjct: 1019 ---DAMPDPD---------------------------------TYAFNCCINGLSKLGDV 1042
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
S A +L++E VP V TFN+LI+ CK E A LF M P+
Sbjct: 1043 -------SRALHRMLELEL--VPDKV-TFNILIAGACKAGNFEQASALFEEMVAKNLQPD 1092
Query: 345 ETTFLVLIKSLYQAARV 361
TF LI L +A +V
Sbjct: 1093 VMTFGALIDGLCKAGQV 1109
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 139/286 (48%), Gaps = 11/286 (3%)
Query: 165 TLASCI--DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
++A+CI D L + G + FE M+ G + S +V C G +++L
Sbjct: 62 SVATCIIIDGLCKVGHEDEAKEIFEEMKAQ-GMIPNVISYSSLVHGFCCAGKLEESKRLF 120
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ ++ + P+ ++LI C +GK+ EAK+L + G L V YN ++D
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLID---GF 177
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C+ D S A K+ L M G N ++ +LI+ CKI + E+A+ L+ M + G
Sbjct: 178 CKIGDL----SSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGK 233
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T+ L+ L Q +VG+ +++ MK++G ++ Y FL LC + +AM
Sbjct: 234 RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAME 293
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+F ++K+ D E+Y L+ C +V+ A F + + G++
Sbjct: 294 LFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQ 339
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD---CVSKLCRKKDPFRLDSEA 294
++I G C G DEAK + EM G ++Y+ ++ C KL E+
Sbjct: 67 IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKL----------EES 116
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+++ +M GV N+ FNVLI LCK + +A KL + G + T+ LI
Sbjct: 117 KRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDG 176
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ + ++ M S G + Y + C I ++E+AM+++ +M G P+
Sbjct: 177 FCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPN 236
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+TY L+T +V AN LF +G+ V Y +
Sbjct: 237 VKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVI 277
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ ++ T N+L + LC + R + + + G P+ T+ LIK L + R
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ +I + LC + ++A +FE+MK G P+ +Y
Sbjct: 61 ISVATCII------------------IDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSS 102
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
L+ +C +++++ LF+E V GV+ ++ V L K V + KK
Sbjct: 103 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKK 153
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 39/208 (18%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ K L+ G GK+ +A +L M G + + Y LD LC+ F
Sbjct: 235 PNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLD---GLCKNGVLF-- 289
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA ++ +++ + E+++ LI LCK + E A + F ++ + G PN T +
Sbjct: 290 --EAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNI 347
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I + +V + + + ++M EKM+ +G
Sbjct: 348 MIHGFCRVEQVDKANILFEKM--------------------------------EKMEENG 375
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALF 438
PD TY+ L+ +C N++++ L
Sbjct: 376 CTPDIITYNTLLRGFCESNKLEEVVNLL 403
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 150/360 (41%), Gaps = 12/360 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA- 149
S V P L + L+ +AG F W ++ + + R + F A
Sbjct: 116 SGVVVRPGLTERVLSRCGDAGNLAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAV 175
Query: 150 ---IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
I + +N ++ P+ + R A + + + M + YG + D+ ++
Sbjct: 176 WALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVEVLDEMPK-YGCEPDEYVFGCLL 234
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ LC+NG A L +D P K L+ GWC +GKL EAK + +M G E
Sbjct: 235 DALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEP 294
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V YN +L ++ + D + L L +M N ++ VLI +LCK R
Sbjct: 295 DIVVYNNLLGGYAQAGKMGDAYDL-------LKEMRRKRCEPNATSYTVLIQSLCKHERL 347
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+A +LF M GC + T+ LI + ++ G E++D M G+ + Y
Sbjct: 348 EEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHI 407
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ E +E+ + +M+ G PD Y+ ++ C V + L++E +G+
Sbjct: 408 MLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGL 467
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 162/369 (43%), Gaps = 19/369 (5%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LG--PKTLA--SCIDRLVRAG 177
++ +H+ TLS + F R + K + F K + LG P T+ + ++ L
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCR--KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKIC 236
R ++ L +RM + G K +L +V LC NG S A L+ F P++
Sbjct: 173 RVSEALELVDRM-VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++ C G+ A L R+M +L V Y+ I+D + K + F L +E
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE--- 288
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
ME G ++ T+N LI C R +D KL M + PN TF VLI S
Sbjct: 289 ----MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ ++ E D+++ M G A Y + C R+E+A+ + + M + G +PD
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLP 476
T+++L+ +C NR+D LF E GV Y + + ++ KK L
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK---LF 461
Query: 477 EKMARKRRR 485
++M +R R
Sbjct: 462 QEMVSRRVR 470
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 145/315 (46%), Gaps = 9/315 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ D + D +V+ T ++ + ++G+ + +ME + K D
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVK 265
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++++ LC++G A L + + F D I + LI G+C G+ D+ +L R+M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ V ++ ++D K + + EA+++L +M G+ N T+N LI
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLR-------EADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R E+AI++ M GC P+ TF +LI +A R+ +G E+ M G
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++E A +F++M + PD +Y +L+ C + ++KA +F +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 441 AVRNGVEVKPKEYRV 455
++ +E+ Y +
Sbjct: 499 IEKSKMELDIGIYMI 513
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G F ME GFK D + ++ C G KL++D +
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ +LI + +GKL EA +L +EM + G T+ YN ++D C++
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID---GFCKEN--- 382
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL+ + V L M G ++ TFN+LI+ CK R +D ++LF M G N T+
Sbjct: 383 RLEEAIQMVDL-MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L++ Q+ ++ ++ M S Y L LC +E+A+ +F K++
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D Y +++ C ++VD A LF GV++ + Y +
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 7/199 (3%)
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L ++M G + +++C + CRK S A + + G + FN
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCR-CRKL------SYAFSTMGKIMKLGYEPDTVIFN 162
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L++ LC R +A++L RM E G P T L+ L +V + +IDRM
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G+ + Y L +C + AM + KM+ D+ Y +++ C +D A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 435 NALFDEAVRNGVEVKPKEY 453
LF+E G + Y
Sbjct: 283 FNLFNEMEIKGFKADIITY 301
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 67/155 (43%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ ++ T +++I+ C+ R+ A ++ + G P+ F L+ L R
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E E++DRM G+ + LC ++ A+ + ++M G P+ TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ C + A L + +++ +Y +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L++G+C GKL+ AK+L +EM V+Y +LD LC + +A ++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD---GLCDNGEL----EKALEIF 496
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+E + + ++ + ++I +C + +DA LF + G + + ++I L +
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + D + +M G+A + Y + G + A + E+MK+ G D T
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTV 616
Query: 419 DLLM 422
+++
Sbjct: 617 KMVI 620
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 75/187 (40%), Gaps = 7/187 (3%)
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V FN L S + K ++ E + L +M G + T ++I + ++ +
Sbjct: 88 VIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMG 147
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
++ GY + L LC R+ +A+ + ++M GH P T + L+ C +
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET--LPEKMARKRRRLK 487
+V A L D V G + P E P + K G+ L KM + +L
Sbjct: 208 KVSDAVVLIDRMVETGFQ--PNEVTYGPVL---NVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 488 QIRLSFV 494
++ S +
Sbjct: 263 AVKYSII 269
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 147/338 (43%), Gaps = 13/338 (3%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRP 179
QN SH T S F +YF RR L ++ GP TL S ++ R
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDL 238
++ + ++M + G++ D + +V L ++ AS A LV + PD
Sbjct: 162 SEAVALVDQM-VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C G+ D A L +M +G E V YN I+D + K D F L ++
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK----- 275
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME G+ +V T+N LIS LC R DA +L M E +P+ F LI + +
Sbjct: 276 --METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSET 417
++ E +++ D M + + Y L + C +R+E+ M VF +M G ++ T
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y L+ + D A +F + V +GV Y +
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 10/280 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ ID L + F +ME G K D + ++ LC G S A +L+ D
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 228 E-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCRKK 285
+ I PD + LI + +GKL EA++L EM + VAYN + + C+ K
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL---IKGFCKYK 370
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
R++ E +V +M G+ N T+ LI + R ++A +F +M G HP+
Sbjct: 371 ---RVE-EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ +L+ L V + + M+ + Y + LC ++E +F
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G P+ TY +M+ +C ++A+ALF E +G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 9/220 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ + G AEKL + + FPD + LIKG+C +++E + REM +
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G TV Y + + + +D A+ V M +GV ++ T+N+L+ LC
Sbjct: 386 GLVGNTVTYTTL---IHGFFQARDC----DNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
E A+ +F M + + T+ +I++L +A +V +G ++ + G
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y ++ C E+A ++F +MK DG P+S TY+ L+
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 9/210 (4%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K D L +M G Y+ ++ CR+ S A +L M G
Sbjct: 90 KFDLVISLGEQMQNLGISHNLYTYSIF---INYFCRRSQL----SLALAILGKMMKLGYG 142
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ T N L++ C R +A+ L +M E G P+ TF L+ L+Q + E +
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
++RM G Y + LC + A+++ KM+ D Y+ ++ C
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
+ +D A LF++ G +KP + +P
Sbjct: 263 YKHMDDAFDLFNKMETKG--IKPDVFTYNP 290
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 41/225 (18%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL 239
T + GFF+ RD D+ ++V +++ +G + PD ++L
Sbjct: 396 TLIHGFFQ--------ARDCDNAQMVFKQMVSDG---------------VHPDIMTYNIL 432
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ G C +G ++ A + M + +L V Y +++ + K + +D + L
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL-------FC 485
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+ GV NV T+ ++S C+ E+A LF M E G PN T+ LI+ A
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR-----A 540
Query: 360 RVGEGDE-----MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
R+ +GDE +I M+S G+A G + +T + R++++
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFA-GDASTFGLVTNMLHDGRLDKS 584
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 276 DCVSKLCRKK-DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
DC L RK +LD +A + DM + ++ F+ L+S + K+ + + I L
Sbjct: 41 DCRENLSRKVLQDLKLD-DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGE 99
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+M G N T+ + I + +++ ++ +M GY L C
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
RI +A+++ ++M G+ PD+ T+ L+ HN+ +A AL + V G +
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 212
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 151/331 (45%), Gaps = 13/331 (3%)
Query: 125 ANFSHTDETLSFFTDYFGRRK---DFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQ 181
F+ T + D F +R D + + +V T ++ ID L ++ + +
Sbjct: 243 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 302
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLI 240
E M + G D + ++ LC+ AE++++ A PD + +I
Sbjct: 303 AKEVLEEM-KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 361
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
+C GKL EA++ +EM + V YN ++D + KL + +EA+ +L
Sbjct: 362 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI-------AEAQVILEQ 414
Query: 301 MEYNG-VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M+ +G V +V T++ +I+ LCK +A KL RM + GC+P+ T+ +I L +
Sbjct: 415 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 474
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ E + ++ MK AG A Y ++ LC ++++A V E+M+ G P+ TY+
Sbjct: 475 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 534
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
++ C R+ +A L E P
Sbjct: 535 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSP 565
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 142/362 (39%), Gaps = 29/362 (8%)
Query: 90 FSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNA-NFSHTDETLSFFTDYFGRRKDFK 148
FS + TP +V +N +A A L F W + FSHT + + R K +
Sbjct: 36 FSGASTTPRIVGRVVNSLKDAKLA-LAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHR 94
Query: 149 AIHDFLVDNKEVLGPKTLASC----------IDRLVRAGRPTQVLGFFERMERDYGFKRD 198
D + LASC I AG L E M + GF D
Sbjct: 95 EAGDLFRS-------ELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM-KSAGFAPD 146
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ ++ + G A ++ + P+ LI + KL+EA +L E
Sbjct: 147 AFTHTPIITAMANAGDLDGAMDHLRSMGCD--PNVVTYTALIAAFARAKKLEEAMKLLEE 204
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M G V YN ++D + KL + A+ V+ M G NV TFN L+
Sbjct: 205 MRERGCPPNLVTYNVLVDALCKL-------SMVGAAQDVVKKMIEGGFAPNVMTFNSLVD 257
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
CK +DA KL M G PN T+ LI L ++ + E E+++ MK+ G
Sbjct: 258 GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTP 317
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC ++IE+A + +M G PD Y ++ +C ++ +A
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 377
Query: 439 DE 440
E
Sbjct: 378 QE 379
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 10/212 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + G+ + E+M+ D + V+ LC++ A+KL+
Sbjct: 391 TYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR 450
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD +I G C G+L+EA+ L + M R G V Y + +S LC+
Sbjct: 451 MCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTL---ISGLCK 507
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM--GEWGC 341
+ ++D EAE+V+ +M G P N+ T+N +++ LC R ++A +L RM G C
Sbjct: 508 AR---KVD-EAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAEC 563
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
P+ T+ ++ +L + V E ++++++MKS
Sbjct: 564 SPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 10/216 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +++I G+C G L A L EM GF + I+ ++ + L
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMA------NAGDL 163
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D + + G NV T+ LI+ + ++ E+A+KL M E GC PN T+ V
Sbjct: 164 DGAMDH----LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNV 219
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ +L + + VG +++ +M G+A + + C ++ A + M G
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 279
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P+ TY L+ C + +A + +E GV
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G ++N L+ L + ++ +A LF C P+ ++ ++I A +
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E+++ MKSAG+A + +T + ++ AM + +++ G +P+ TY L+
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAA 188
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ ++++A L +E G Y V
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNV 219
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 139/300 (46%), Gaps = 10/300 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + L RA R + L M G + + +++ LC+ G A ++ D
Sbjct: 185 TYNSLLHGLCRARRVSDALALMRDMTC-RGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 243
Query: 225 TANEI-FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ PD I ++LI G C ++DE+ L R GG + V Y+ + + LCR
Sbjct: 244 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV---IYGLCR 300
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RLD EA ++LL ++ G P +V ++ LI LCK + ++A L+ M GC
Sbjct: 301 SN---RLD-EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDA 356
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L +A RV E ++ RM G Y + LC + +++A+ +
Sbjct: 357 DVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELV 416
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA-LFDEAVRNGVEVKPKEYRVDPRYLKK 462
E+M+ P + TY++L+ C RVD A F E + NGV Y + LKK
Sbjct: 417 EEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKK 476
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 13/271 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTAN 227
+D L R G+ + + F+ M +R D S ++V LC G A + + +
Sbjct: 52 LDGLFRTGKLERAMALFQEMLD----RRSHDVISFNILVTGLCRAGKIETALEFFRKMDD 107
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P+ +LI G C ++ +A L M G + Y ++D LC++
Sbjct: 108 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVD---GLCKESKV 164
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ A +VL +M G N+ T+N L+ LC+ RR DA+ L M GC PN T
Sbjct: 165 ----AAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 220
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ LI L + RV + M+ M G Y + LC +++++++++ +
Sbjct: 221 YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV 280
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ G PD TY ++ C NR+D+A L
Sbjct: 281 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 311
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 22/262 (8%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKL 249
RD+G + + + +++ LC+N A++L + + E P + L+ G GKL
Sbjct: 2 RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKL 61
Query: 250 DEAKRLAREMY-RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY----- 303
+ A L +EM R ++ +++N + V+ LCR A K+ +E+
Sbjct: 62 ERAMALFQEMLDRRSHDV--ISFNIL---VTGLCR----------AGKIETALEFFRKMD 106
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+ NV T++VLI LCK R A++L M GC P+ T+ +L+ L + ++V
Sbjct: 107 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 166
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
E++ M AG Y L LC R+ A+++ M G P+ TY L+
Sbjct: 167 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 226
Query: 424 KWCAHNRVDKANALFDEAVRNG 445
C RV A A+ + + G
Sbjct: 227 GLCKVGRVKDACAMLADMIDKG 248
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L + P + FE M + + +++ L G A L ++
Sbjct: 12 TYNSLIDGLCKNNEPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQE 70
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ D ++L+ G C GK++ A R+M + Y+ ++D + K R
Sbjct: 71 MLDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVLIDGLCKANRV 129
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
S+A ++L M+ G +V T+ +L+ LCK + A ++ M + GC PN
Sbjct: 130 -------SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ L+ L +A RV + ++ M G Y + LC + R++ A ++
Sbjct: 183 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 242
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M G PD Y++L+ C ++VD++ AL AV G++
Sbjct: 243 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 285
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M +G NV T+N LI LCK + A +LF M C P+ T+ L+ L++ +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 361 VGEG----DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ EM+DR + + +T LC +IE A+ F KM D +P+
Sbjct: 61 LERAMALFQEMLDRRSHDVIS-----FNILVTGLCRAGKIETALEFFRKMD-DRCSPNVI 114
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY +L+ C NRV +A L + G Y +
Sbjct: 115 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTI 153
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 136/297 (45%), Gaps = 9/297 (3%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
HD +V + + + ++ L + G + RM D + D +++ LC
Sbjct: 158 HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLL-RMIEDRSTRPDVVMYSTIIDGLC 216
Query: 211 ENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
++ + A + A IFP+ LI G+C+ G+L A L EM
Sbjct: 217 KDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVY 276
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
YN ++D + K + K EA+K+L +M + G P +V T+N ++ LCK + + A
Sbjct: 277 TYNILIDALCKEGKVK-------EAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKA 329
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
LF +M +WG PN+ T+ LI L + R+ ++ + G I + Y ++
Sbjct: 330 TALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISG 389
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC ++A+++ KM+ +G P++ T+D+++ + DKA L + G+
Sbjct: 390 LCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 121/293 (41%), Gaps = 33/293 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G + + +L +++ C G +++ ++ + PD + L+KG C+ G++ +
Sbjct: 95 GIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRS 154
Query: 253 KRLAREMYRGGFELGTVAYNCILD---------CVSKLCRK------------------- 284
++ GF++ V+Y +L+ C KL R
Sbjct: 155 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDG 214
Query: 285 --KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
KD ++ ++A +M G+ NV T++ LI C + A L M +
Sbjct: 215 LCKD--KIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNIN 272
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ +LI +L + +V E +++ M G Y L LC + +++A ++
Sbjct: 273 PNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATAL 332
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
F KMK G P+ TY L+ C R+ A LF + G + + Y V
Sbjct: 333 FMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNV 385
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 61/146 (41%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ N+ T N+LI+ C + + + + ++ + G P+ T L+K L
Sbjct: 91 MEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 150
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V D++ + G+ + + Y L LC I A+ + ++ PD Y
Sbjct: 151 VKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYST 210
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
++ C V++A F E G+
Sbjct: 211 IIDGLCKDKIVNQAYDFFSEMNARGI 236
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 161/388 (41%), Gaps = 18/388 (4%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
SH++ T LV+ L G + F W + F H+ E+ D G K F +
Sbjct: 70 SHISTT--LVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYHILVDILGSSKQFALL 127
Query: 151 HDFLVDNKEV----LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
DFL++ +E + P+ RA P+ + F+RM ++G K D L ++
Sbjct: 128 WDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMV-EFGLKPTIDDLDQLL 186
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC+ +A +A+++ ++ K +L++GW G+ A ++ EM +
Sbjct: 187 YVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAV 246
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+AYN +L+ K + SEA K+ +M NG+ + TF++ I C+
Sbjct: 247 DVLAYNSLLEAFCKGGKV-------SEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDI 299
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
A ++ M + PN T+ +IK L + +V E ++++ + Y
Sbjct: 300 HLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAI 359
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L C + A + +M D PD +Y++L+ R D+A +++ G
Sbjct: 360 LAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGF 419
Query: 447 EVKPKEYRVDPRYLKKPIAVKKGKKRET 474
Y V L K KKGK E
Sbjct: 420 YPSVSTYSVMVHGLCK----KKGKLEEA 443
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 16/191 (8%)
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET--- 346
L S+A + M G+ ++ + L+ LCK + ++ A ++F R+ H +T
Sbjct: 159 LPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVK----HQFQTRAK 214
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +L++ ++ D M+ A+ Y L C ++ +A +F +M
Sbjct: 215 TYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREM 274
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
++G PD+ T+ + + +C N + A + DE K Y + P +
Sbjct: 275 GSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEM---------KRYDLVPNVFTYNCMI 325
Query: 467 KKGKKRETLPE 477
KK K+E + E
Sbjct: 326 KKLCKKEKVEE 336
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 8/258 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGW 243
FF+ + GF+ + + ++E +G A ++ KD +F PDD LI+G+
Sbjct: 3 FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGF 62
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C ++ +A L EM G V + + + KLC +A ++ M
Sbjct: 63 CKAEQIPQAVNLLGEMKAAGITPTIVTFGSL---IRKLCE----LNFTDKALQIFHQMID 115
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
V + + V+I +LCKI + + A F RM + GC P++ T+ VL+ SL++A + +
Sbjct: 116 MKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQ 175
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
G ++ + M S G++ Y + C RI+QA+S+ ++K G +P Y L+
Sbjct: 176 GHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLID 235
Query: 424 KWCAHNRVDKANALFDEA 441
C H+R D+A LF+ A
Sbjct: 236 GLCKHDRHDEARELFEMA 253
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 10/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T A+ ++ +AGR Q L R+ + G +++ LC++ A +L +
Sbjct: 194 TYATVVNGYCKAGRIDQALSLMRRL-KGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEM 252
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
A ++ D + I G C GKLDEAK + +M G V+YN I + LC+
Sbjct: 253 AAGDV-QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI---IYSLCKD 308
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-P 343
R+ E + ME +P V VL+ LCK RR E+A + RM E G P
Sbjct: 309 N---RVSEAKELMDQAMERKCMP-GVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +I L +A R+ + ++ +M+ AG Y + C + R+++A +F
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 424
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M G D Y++L+ +C +VD+A A+ +E G++
Sbjct: 425 QRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQ 468
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 119/252 (47%), Gaps = 13/252 (5%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S I L +AG+ + +M + G D S +++ LC++ S A++L+ D A
Sbjct: 265 SFISGLCKAGKLDEAKAVHVKM-IEAGCAPDPVSYNVIIYSLCKDNRVSEAKELM-DQAM 322
Query: 228 E--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCRK 284
E P +C +L+ G C +++EA + M G V Y+ ++D LC+
Sbjct: 323 ERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVID---GLCKA 379
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
RLD +A VL M G +V T+ +I CK+ R ++A +LF RM E GC +
Sbjct: 380 D---RLD-DAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALD 435
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ +LI+ +AA+V E MI+ M G + LC R+E+A + E
Sbjct: 436 VVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLME 495
Query: 405 KMKTDGHNPDSE 416
KM + PDS+
Sbjct: 496 KMNFESL-PDSD 506
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 45/322 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL---C--ENGYASYAEKLVKD 224
I L + + +FERM + G DK + ++V L C E G+ + E L K
Sbjct: 129 IGHLCKINKLDLAASYFERMVQS-GCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 187
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--C----- 277
+ E+ + + G+C G++D+A L R + G Y+ ++D C
Sbjct: 188 HSPELVTYATV----VNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRH 243
Query: 278 -----------------------VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
+S LC+ +LD EA+ V + M G + ++N
Sbjct: 244 DEARELFEMAAGDVQDVIVYTSFISGLCKAG---KLD-EAKAVHVKMIEAGCAPDPVSYN 299
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
V+I +LCK R +A +L + E C P VL+ L ++ RV E +++RM
Sbjct: 300 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLET 359
Query: 375 G-YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G A Y + LC +R++ A V +KM+ G PD TY ++ +C R+D+
Sbjct: 360 GDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 419
Query: 434 ANALFDEAVRNGVEVKPKEYRV 455
A LF G + Y +
Sbjct: 420 ARELFQRMHERGCALDVVAYNI 441
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 62/129 (48%)
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P++ T+ LI+ +A ++ + ++ MK+AG + + +LC + ++A+ +
Sbjct: 50 PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
F +M PD+ Y +++ C N++D A + F+ V++G Y V L K
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169
Query: 463 PIAVKKGKK 471
++G +
Sbjct: 170 ACKWEQGHQ 178
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 29/311 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L +A + + E + GF D + ++V+ LC+ G A K+V+
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSS-GFVPDVVTYTIIVDGLCKEGRLDKALKMVEG 461
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P L++G C G++DEA + +EM +AY +++ K R
Sbjct: 462 MLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSR 521
Query: 284 KKD-----------PF---------------RLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
K+ P+ RLD E V DM G N++T+N+++
Sbjct: 522 TKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLD-EIPNVFEDMACRGCVPNIKTYNIVM 580
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LCK + ++A M GC P+ ++ ++I L++A++ E +++D+M AG
Sbjct: 581 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 640
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + + C ER + A+ + + M G +PD+ TY+ L++ NR+ A L
Sbjct: 641 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 700
Query: 438 FDEAVRNGVEV 448
E +RNG V
Sbjct: 701 MHEMLRNGCVV 711
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 8/240 (3%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++++ LC+ A +++ + + + PD + ++ G C GK + A L M
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 325
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
YN + +S LC++++ R A+ ++ + +G +V T+++L LCK
Sbjct: 326 NCRPSCCTYNTL---ISGLCKQQNVDR----AKDLVDEFVSSGFVPDVVTYSILADGLCK 378
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
R ++A +L M GC PN T+ LI L +A++ + E+++ + S+G+
Sbjct: 379 RGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT 438
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC R+++A+ + E M G P TY LM C RVD+A+ +F E V
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 133/301 (44%), Gaps = 12/301 (3%)
Query: 143 RRKDFKAIHDFLVD-NKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
R+ D +FL + N+ + P T ID L +A + + M D G D
Sbjct: 238 RKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM-VDRGVTPDT 296
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ +++ LC+ G A L+ A P + LI G C +D AK L E
Sbjct: 297 VTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDE 356
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
GF V Y+ + D LC++ R+D EA +++ +M G N+ T+N LI
Sbjct: 357 FVSSGFVPDVVTYSILAD---GLCKRG---RID-EAFELVKEMSGKGCTPNLVTYNTLID 409
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LCK ++E A +L + G P+ T+ +++ L + R+ + +M++ M G
Sbjct: 410 GLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 469
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC R+++A +F++M + D+ Y L+ +C +R +A +
Sbjct: 470 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 529
Query: 439 D 439
D
Sbjct: 530 D 530
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 136/330 (41%), Gaps = 29/330 (8%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD------SLRLVVE 207
+VD T S +D L +AG+ FER +++ + ++
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGK-------FERAHSLLAVMAERNCRPSCCTYNTLIS 339
Query: 208 KLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC+ A+ LV + + F PD +L G C G++DEA L +EM G
Sbjct: 340 GLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTP 399
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V YN ++D + K + + + L L + +G +V T+ +++ LCK R
Sbjct: 400 NLVTYNTLIDGLCKASKTEKAYEL-------LESLVSSGFVPDVVTYTIIVDGLCKEGRL 452
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+ A+K+ M + GC P+ T+ L++ L + RV E + M S Y
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ C R ++A V + ++ P + Y+ LM +C R+D+ +F++ G
Sbjct: 513 VNGYCKSSRTKEAQKVVDGIR---GTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGC 569
Query: 447 EVKPKEYRVDPRYLKKPIAVKKGKKRETLP 476
K Y + L K GK E P
Sbjct: 570 VPNIKTYNIVMDGL-----CKHGKVDEAFP 594
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 128/309 (41%), Gaps = 42/309 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ L+ G ++ FERM D G+ D + LV++ LC+ A ++
Sbjct: 132 LQTLLENGSSDRIPAMFERM-LDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRG 190
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL-------DC---- 277
F P+ + +L + +C G+L +A E++R +AYN I+ DC
Sbjct: 191 FKPEVSVYTILTRAFCKTGRLKDA----LEIFRNIPSPDAIAYNAIIHGHCRKNDCDGAL 246
Query: 278 ---------------------VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ LC+ +A ++L +M GV + TFN +
Sbjct: 247 EFLKEMNERKVAPDVFTYNILIDGLCKASKT----DKASEMLHEMVDRGVTPDTVTFNSI 302
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ LCK + E A L M E C P+ T+ LI L + V +++D S+G+
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y LC RI++A + ++M G P+ TY+ L+ C ++ +KA
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422
Query: 437 LFDEAVRNG 445
L + V +G
Sbjct: 423 LLESLVSSG 431
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 121/297 (40%), Gaps = 17/297 (5%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
++D +V G K S L RA GR L F + D + ++
Sbjct: 182 MLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP-----SPDAIAYNAIIHGH 236
Query: 210 CENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C A + +K+ ++ PD ++LI G C K D+A + EM G T
Sbjct: 237 CRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDT 296
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V +N I+D LC+ R A +L M + T+N LIS LCK + +
Sbjct: 297 VTFNSIMD---GLCKAGKFER----AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDR 349
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A L G P+ T+ +L L + R+ E E++ M G Y +
Sbjct: 350 AKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLID 409
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
LC + E+A + E + + G PD TY +++ C R+DKA + + ++ G
Sbjct: 410 GLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 17/314 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L +A +P + ++M + G D + ++ + C+ A ++K+
Sbjct: 615 IDGLFKASKPKEARQVLDQMIQ-AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCRKKDP 287
+ PD+ + LI G +L +A L EM R G + YN I+D +LC++
Sbjct: 674 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIID---RLCKEG-- 728
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+A ++ M +GV N T+N+ I LCK R ++A L M +E +
Sbjct: 729 --CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVS 783
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSA-GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ +I L +A ++ ++ M + G I + + +R+++A+++ M
Sbjct: 784 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLM 843
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
G +P TY++++T C ++VDKA LFDE G+ Y V +
Sbjct: 844 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV---LIYGLCGQ 900
Query: 467 KKGKKRETLPEKMA 480
+GK+ + E+MA
Sbjct: 901 GRGKEALQVLEEMA 914
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 51/279 (18%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
++ +H+ L + V T + IDRL + G Q L + M +G + + + + +
Sbjct: 698 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT-GHGVEANTVTYNIFI 756
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
++LC+ G A L+ + + D+ +I G C +LD A +LAREM
Sbjct: 757 DRLCKEGRLDEASSLLSEM--DTLRDEVSYTTVIIGLCKAEQLDRASKLAREM------- 807
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+ G+ TFN+LI K +R
Sbjct: 808 ----------------------------------VAVKGLCITSHTFNLLIDAFTKTKRL 833
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++A+ L M + GC P+ T+ ++I L + +V + E+ D M G Y
Sbjct: 834 DEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 893
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+ LCG R ++A+ V E+M + D E DL KW
Sbjct: 894 IYGLCGQGRGKEALQVLEEMASS----DCEIDDL---KW 925
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 121/309 (39%), Gaps = 18/309 (5%)
Query: 139 DYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
D G + I + L + L P ++ + RL P + FF D GFK
Sbjct: 69 DLLGLLQSGSNIRERLEQWRGTLQPAVVSRVLQRL---KDPQTAIVFF-VWAGDRGFKHS 124
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ ++ L ENG + + + + + PD L+IK C ++D+A +
Sbjct: 125 TFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLD 184
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR-NVETFNVL 316
+ GF+ Y + K R KD + + +P + +N +
Sbjct: 185 KAKVRGFKPEVSVYTILTRAFCKTGRLKDALEI------------FRNIPSPDAIAYNAI 232
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I C+ + A++ M E P+ T+ +LI L +A++ + EM+ M G
Sbjct: 233 IHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV 292
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ + LC + E+A S+ M P TY+ L++ C VD+A
Sbjct: 293 TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKD 352
Query: 437 LFDEAVRNG 445
L DE V +G
Sbjct: 353 LVDEFVSSG 361
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 33/174 (18%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G + T N + L + S+ +F RM + G P+ T+ ++IKSL Q ++ +
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTR-LCGIERIEQAMSVFEKMKT----------DGH-- 411
M+D+ K G+ + Y LTR C R++ A+ +F + + GH
Sbjct: 180 FTMLDKAKVRGFK-PEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCR 238
Query: 412 -------------------NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD TY++L+ C ++ DKA+ + E V GV
Sbjct: 239 KNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV 292
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
++FE+M G+ PDS TY L++ C N++DKA + D+A G + + Y + R
Sbjct: 146 AMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAF 205
Query: 461 KK 462
K
Sbjct: 206 CK 207
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 156/393 (39%), Gaps = 47/393 (11%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V +P LV L AG L F W + F +T E+ + G+ K F+ +
Sbjct: 123 VNMSPELVAEVLRNLSNAGILALAFFRWAERQQGFRYTAESFHNLIEALGKIKQFRLVWS 182
Query: 153 FL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ + + +L T + R RA + + + FE+M +G K D +++ L
Sbjct: 183 LVEAMRCRGLLSKDTFRLIVRRYARARKVKEAVETFEKMS-SFGLKADLSDYNWLIDVLS 241
Query: 211 ENGYASYAEKLVKDTA--NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
++ A + K+ PD K +L++GW + L K + +EM G +
Sbjct: 242 KSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDV 301
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV---------------------- 306
VAY + +S C+ EA KV +ME NG
Sbjct: 302 VAYGTL---ISSFCKSGKC----DEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDE 354
Query: 307 -------------PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
P V T N ++ C+ + + A K+ M + G PN T+ ++++
Sbjct: 355 ALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQ 414
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L ++ ++ E + RM G Y + C ER++ A+ V+++MK G P
Sbjct: 415 YLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLP 474
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ L+ C NR+++A F E + G+
Sbjct: 475 CMHMFSSLINGLCFENRLEEACVYFQEMLDKGI 507
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 8/245 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLD 250
D G K D + ++ C++G A K+ ++ AN P + +LI G + +LD
Sbjct: 294 DAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLD 353
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA + GF + N ++ + + + F++ E M G+ N
Sbjct: 354 EALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDE-------MRKTGIGPNA 406
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+++++ L K ++ E+A +F RMG GC P T+ +++ RV ++ +
Sbjct: 407 RTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQ 466
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
MK G + + LC R+E+A F++M G P + + L R
Sbjct: 467 MKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGR 526
Query: 431 VDKAN 435
+ A
Sbjct: 527 ISLAQ 531
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P I+ L R + L +FE + + GF + + VV C + +A K+V
Sbjct: 336 PHVYCMLINGLGSEERLDEALKYFE-LSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMV 394
Query: 223 KDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ I P+ + D++++ K++EA + + M G E Y + V
Sbjct: 395 DEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMM---VGMF 451
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C + R+D A KV M+ GV + F+ LI+ LC R E+A F M + G
Sbjct: 452 CSNE---RVDM-ALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGI 507
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEM 367
P F L ++L + R+ +M
Sbjct: 508 RPPGQLFSNLKEALIEGGRISLAQDM 533
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 11/344 (3%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFK-AIH--DFLVDNKEVLGPKTLASCID 171
L F +W + F + E + D G+ + F A H D + + T ++ +
Sbjct: 162 LAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVR 221
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
R VRAG + + F RME DYG D + +V+ LC+ A+ A+ + P
Sbjct: 222 RYVRAGLAAEAVHAFNRME-DYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEP 280
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + L+ GWC G + +A+ + +M G + Y+ ++D LCR R
Sbjct: 281 DVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVID---SLCRCGQITR-- 335
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A V +M G N TFN L+ K R+E +K++ +M GC + ++ +
Sbjct: 336 --AHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFI 393
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I+S + + E ++++ M G A + + + + A ++ +MK
Sbjct: 394 IESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNC 453
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P++ TY++LM + D + E + VE YR+
Sbjct: 454 QPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRI 497
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 31/242 (12%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L R G+ T+ F M D G + + ++ + G K+
Sbjct: 319 TYSIVIDSLCRCGQITRAHDVFSEM-IDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQ 377
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D I + +I+ C D L+EA ++ M + G +N I C++KL
Sbjct: 378 MKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHD 437
Query: 284 KKDPFRL------------------------DSEAEKVLL----DMEYNGVPRNVETFNV 315
R+ +S + ++L +M+ + V NV T+ +
Sbjct: 438 VNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRI 497
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGC-HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LIS C ++ +A KL M E C PN + + +++ L +A ++ + +E++D+M +
Sbjct: 498 LISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVAR 557
Query: 375 GY 376
G+
Sbjct: 558 GF 559
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 44/323 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
+DRL RAG+ + F +M ER G + + ++ LC++ A KL+++ A++
Sbjct: 52 VDRLCRAGKVDEADELFHKMIER--GCSANTVAYNALINGLCKDENIERAYKLLEEMASK 109
Query: 229 IF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ PD+ + ++ G C GK+ EAK+ M G+ VAYN +LD + K + +
Sbjct: 110 GYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEA 169
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ L +DM V ++ T+N LI C++ ++++A+KLF + G P+ T
Sbjct: 170 WGLFKT-----MDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT 224
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY-------------------YEFLT 388
+ ++ L + + + E +EM +M +G A Y YE +T
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMT 284
Query: 389 R----------------LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
LC ++++ A V E+M G PD TY++L+ C N VD
Sbjct: 285 EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
KA+ LF V NG Y V
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSV 367
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 12/266 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF+ D + ++ LC+ G + A ++V++ T + PD +++ C GK+DEA
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV-PRNVE 311
L +M G TVAYN + ++ LC+ ++ R A K+L +M G P N+
Sbjct: 65 DELFHKMIERGCSANTVAYNAL---INGLCKDENIER----AYKLLEEMASKGYEPDNI- 116
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N ++S LC++ + +A + F M G P+ + L+ +LY+ +V E + M
Sbjct: 117 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176
Query: 372 KSAGYAIGKK--DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
A + Y + C +E+ ++AM +F+ + G+ PD+ TY+ ++ +
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRV 455
+D+A +F + V +G Y +
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSI 262
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 11/281 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + + L R G+ ++ FF+ M G+ D + +++ L + G + A L K
Sbjct: 117 TYNTILSGLCRMGKVSEAKQFFDSMPS-RGYSPDVVAYNGLLDALYKEGKVAEAWGLFKT 175
Query: 224 -DTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
D A+ ++ PD + LI G+C K DEA +L +++ G+ TV YN IL L
Sbjct: 176 MDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSIL---LGL 232
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
RK + EAE++ M +G N T+++++S C++ ++L+ M E
Sbjct: 233 ARKSNM----DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRF 288
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ +I L +A +V + ++++ M G Y L LC +++A
Sbjct: 289 SPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 348
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+F M +G PD +Y +++ C N+V A LFD +
Sbjct: 349 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 389
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 147/338 (43%), Gaps = 23/338 (6%)
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRL 173
++ +N + TDE + F D + + D + N +LG L
Sbjct: 187 LITYNTLIDGFCRVEKTDEAMKLFKDVIAK----GYMPDTVTYNSILLG----------L 232
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PD 232
R + F++M D G + + +V+ C G + +L ++ + F PD
Sbjct: 233 ARKSNMDEAEEMFKKM-VDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPD 291
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+C+ +I C K+D+A ++ EM + G V YN +LD LC+ L
Sbjct: 292 VLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD---GLCKT----NLVD 344
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A ++ M NG ++ +++V+++ LCK + DA LF RM E P+ TF +L+
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 404
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L +A ++ E +++D M + LC +R ++A+ +F+ M G
Sbjct: 405 DGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
D +++++ C ++ +A F V++ E P
Sbjct: 465 ADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSP 502
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 75/139 (53%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G +V T++ +IS LCK + +A+++ M E G +P+ T+ +++ L +A +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E DE+ +M G + Y + LC E IE+A + E+M + G+ PD+ TY+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 421 LMTKWCAHNRVDKANALFD 439
+++ C +V +A FD
Sbjct: 121 ILSGLCRMGKVSEAKQFFD 139
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 7/180 (3%)
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M GFE V Y+ I +S LC+ +EA +++ +M GV +V T+ +++
Sbjct: 1 MAEKGFEPDVVTYSTI---ISGLCKTGKV----TEALEMVEEMTEKGVNPDVATYTIIVD 53
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC+ + ++A +LF++M E GC N + LI L + + ++++ M S GY
Sbjct: 54 RLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEP 113
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y L+ LC + ++ +A F+ M + G++PD Y+ L+ +V +A LF
Sbjct: 114 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLF 173
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 11/273 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA- 226
+ ID L +A + E M + G D + ++++ LC+ A +L
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSK-IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 355
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N PD +++ G C K+ +A+ L M V +N ++D LC+
Sbjct: 356 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMD---GLCKAG- 411
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+LD + + + E+N +P V T L+ LC+ +R+++A++LF M E G +
Sbjct: 412 --KLDEAKDLLDVMSEHNVLPDGV-TCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVL 468
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRM-KSAG-YAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+++ L + ++ + M KS G ++ Y + L R++QA+ F+
Sbjct: 469 PHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQ 528
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+M G PD Y+ LM R +A+ L
Sbjct: 529 QMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E G P+ T+ +I L + +V E EM++ M G Y + RLC +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+++A +F KM G + ++ Y+ L+ C +++A L +E G E
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYE 112
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G+ Y ++ LC ++ +A+ + E+M G NPD TY +++ + C +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
VD+A+ LF + + G Y L K +++ K L E+MA K
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYK---LLEEMASK 109
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 172/392 (43%), Gaps = 20/392 (5%)
Query: 59 PDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFN 118
PD ++ L+ +L++ AD +S LH H+ ++ L + L F
Sbjct: 76 PDVYASQVLN--VLKSTSADNADLSGVLHQFMVHMDE--DIILMVLQKQRSNWQVALAFF 131
Query: 119 HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE-----VLGPKTLASCIDRL 173
+W ++H + D GR K + + + E V+ K A ++R
Sbjct: 132 NWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAVLLNRY 191
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD 233
A + + + F + +DYGF+ D ++++ LC + AE L ++ +E
Sbjct: 192 AGAHKVQEAIEVF-YLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVT 250
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
K ++++ GWCV G L +A+R+ ++ E + ++ ++K R S
Sbjct: 251 KSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRI-------SA 303
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A K+ M G+ +V N +I LC ++ +A+++F M + C + T+ LIK
Sbjct: 304 AVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIK 363
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ + R+ + E++D M++ G + + Y L E+ + +++ ++M+ G
Sbjct: 364 YMCKIKRMEKVYELLDDMEAKGCSPNNRTYSYILK---TTEKPKDVIALMQRMERSGCKL 420
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
DS+ Y+L++ + ++DE R G
Sbjct: 421 DSDMYNLILNLYIKWKYEKGMQQIWDEMERRG 452
>gi|449455613|ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Cucumis sativus]
Length = 572
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 161/392 (41%), Gaps = 45/392 (11%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
+ V + +V LN A++ F +W + + + + GRR F ++
Sbjct: 138 TDVILSQDVVSKVLNTGSLGSEAMVTFFYWAIKQPSIPKDASSYNIILKALGRRGFFDSM 197
Query: 151 HDFLVDNKEVLGPKTL---ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
D L + TL + +D LV+ + ++ L FF + ++ G K D ++L ++++
Sbjct: 198 MDVLYNMTREGVEATLEMVSIVVDSLVKGHQVSKALQFFRNL-KEIGLKCDTETLNILLQ 256
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
+C + A T I + +++I GW G+ E +++ + M GF
Sbjct: 257 CMCRRSHVGAANSFFNLTKGNIPFNVMTYNIVIGGWSRYGRHGEVEQMLKAMELDGFSPD 316
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ + +++C+ + + D A K+ M+ NG +V+ +N +ISN I +
Sbjct: 317 CLTHTYLIECLGRANQIDD-------AVKIFDKMDENGCTPDVDAYNAMISNFICIGDFD 369
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM---------------- 371
+ + RM C P+ T+ LI +A +V + EM D M
Sbjct: 370 QCLTYYERMLSNRCEPDMNTYSNLITGFLKAKKVADALEMFDEMVARIIPTTGAITSFIQ 429
Query: 372 ------------------KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ G I K Y L RL + ++++ +M+ G++P
Sbjct: 430 LSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWNEMQESGYDP 489
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
D ETY+ + C +++ A + +E +R G
Sbjct: 490 DVETYEHAIDCLCKTGQLENAVLVMEECLRQG 521
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 5/191 (2%)
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S+A + +++ G+ + ET N+L+ +C+ R A F+ + + N T+ ++
Sbjct: 230 SKALQFFRNLKEIGLKCDTETLNILLQCMCR-RSHVGAANSFFNLTKGNIPFNVMTYNIV 288
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + R GE ++M+ M+ G++ + + L +I+ A+ +F+KM +G
Sbjct: 289 IGGWSRYGRHGEVEQMLKAMELDGFSPDCLTHTYLIECLGRANQIDDAVKIFDKMDENGC 348
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY-RVDPRYLKKPIAVKKGK 470
PD + Y+ +++ + D+ ++ + N E Y + +LK A K
Sbjct: 349 TPDVDAYNAMISNFICIGDFDQCLTYYERMLSNRCEPDMNTYSNLITGFLK---AKKVAD 405
Query: 471 KRETLPEKMAR 481
E E +AR
Sbjct: 406 ALEMFDEMVAR 416
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 154/360 (42%), Gaps = 7/360 (1%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
+ + LV TL + L F W A+ SH + + D + + F
Sbjct: 79 IALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQ 138
Query: 153 FLVD-NKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
F+++ ++ L P T I R V AG Q + F+ M D D +++ L
Sbjct: 139 FIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLLDTL 198
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ GY A ++ + + K+ +LI GWC ++ A+RL EM G V
Sbjct: 199 SKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGJXANVV 258
Query: 270 AYNCILD--CVSKLCRKKDPF-RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
YN +L+ C D F R +AEKVL +M G+ +V +++++I + +
Sbjct: 259 TYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVIHVYSRAHKP 318
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E + M + G P T+ ++K L R+ + +E++ M G + Y F
Sbjct: 319 ELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCF 378
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHN-PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G + + A+ ++ KMK + PD TY++L+ + NR++ ++D+ +G
Sbjct: 379 FKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSG 438
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
+V ++N++I L K+R+ + A + M + P TTF +LI+ A +
Sbjct: 115 HDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRA 174
Query: 368 IDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
D M D+ L L ++ A +F + K +++ Y +L+ WC
Sbjct: 175 FDDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFK-FEANAKMYTILIYGWC 233
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRV 455
NRV A L E V G+ Y V
Sbjct: 234 KINRVSIAERLLGEMVERGJXANVVTYNV 262
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
RA +P L RM +D G + VV+ LC G AE+LV D + + P
Sbjct: 314 RAHKPELTLDKL-RMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSA 372
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREM---YRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
+ K + D A RL R+M Y ++ T YN ++ KL R +
Sbjct: 373 ATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHT--YNILVGMFVKLNRMEI---- 426
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+++ DM+ +G +++++ +LI LC+ ++ ++A F M E G P + TF
Sbjct: 427 ---VQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFET 483
Query: 351 LIKSLYQA 358
L + L Q+
Sbjct: 484 LYRGLIQS 491
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 149/316 (47%), Gaps = 25/316 (7%)
Query: 141 FGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
+ + KDF FL V N + T + +D L +A R + + M RD G
Sbjct: 87 YSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEM-RDKGCSP 145
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+ + ++VE LCE A+K++++ A FPD + IKG C ++DEA++
Sbjct: 146 NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF- 204
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ R V+Y + ++ LC+ D LDS A ++L M G +V T++ L
Sbjct: 205 --LARMPVTPDVVSYTTV---INGLCKSGD---LDS-ASRMLDHMSNRGCTPDVVTYSSL 255
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I CK E A+ L M + GC PN + L+ +L++ +G+ ++M+ M+ G+
Sbjct: 256 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 315
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK----------WC 426
Y + LC ER+++A +VF++M G P++ +Y +L+ C
Sbjct: 316 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLC 375
Query: 427 AHNRVDKANALFDEAV 442
R D+A ALF + +
Sbjct: 376 KGGRFDEACALFSKVL 391
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 12/275 (4%)
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIF 230
+L R R + F+ M D + D + +++ LC + A KL+
Sbjct: 16 QLTREHRHDKASAVFQEM-IDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCV 74
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PDD I + LI G+ +A + EM + V Y I+D + K R +D
Sbjct: 75 PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRD---- 130
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A K+L +M G N+ T+NV++ LC+ R+ ++A K+ M G P+ T+
Sbjct: 131 ---AVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
IK L + RV E + + RM + Y + LC ++ A + + M G
Sbjct: 188 FIKGLCKCDRVDEARKFLARMPVTPDVVS---YTTVINGLCKSGDLDSASRMLDHMSNRG 244
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY L+ +C V++A L D ++ G
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 279
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 130/327 (39%), Gaps = 57/327 (17%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + R + F RM D S V+ LC++G A +++
Sbjct: 184 TYNSFIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGDLDSASRMLDH 239
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+N PD LI G+C G+++ A L M + G VAYN +L + +L
Sbjct: 240 MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 299
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+AE +L++ME G +V ++N I LCK R + A +F RM E GC P
Sbjct: 300 I-------GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 352
Query: 344 NETTF----------LVLIKSLYQAARVGEG--------DE------------------- 366
N +++ VL+ L + R E DE
Sbjct: 353 NASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 412
Query: 367 --MIDRMKSAGYAIGKKDYYEFLT------RLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
ID+ + +K+ +T LC +R+ A ++ M +G PD TY
Sbjct: 413 RRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 472
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+ C + A LF+EAV+ G
Sbjct: 473 GTLVDAMCKCGKSAAALELFEEAVKGG 499
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 23/291 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S ID + G + +G + M + G + + + ++ L G+ AE ++ +
Sbjct: 251 TYSSLIDGFCKGGEVERAMGLLDSMLK-LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG----------FELGTVAYNC 273
F PD + I G C ++ +AK + M G + + Y
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369
Query: 274 ILDCVSKLCRKKDPFRLDSEA--EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+LD + K R + L S+ EK+ +V +NV++ + CK R+ + A++
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDEKI--------CEPDVFFYNVMLDSHCKRRQIDKALQ 421
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+ +M E C N T+ +L+ L R+ + + M+ M G+ Y + +C
Sbjct: 422 IHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 480
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ A+ +FE+ G PD TY L+T N ++A LF + V
Sbjct: 481 KCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLV 531
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 34/271 (12%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+CID L +A R + F+RM VE+ C +SY+ +V
Sbjct: 324 ACIDGLCKAERVKKAKAVFDRM----------------VERGCTPNASSYSMLIV----- 362
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRL-AREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
D + +L+ G C G+ DEA L ++ + E YN +LD C+++
Sbjct: 363 ----DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD---SHCKRR- 414
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
++D + +E N NV T+N+L+ LC R DA + M + G P+
Sbjct: 415 --QIDKALQIHKQMLEKNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFV 470
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ L+ ++ + + E+ + G Y +T L E+A +F K+
Sbjct: 471 TYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 530
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
PD +T LL K N+ KA +
Sbjct: 531 VERRWVPDDKTLGLLHRKLKLLNKPRKAEVV 561
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 30/313 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ + GR + +F M+R+ G + + V+ C+NG A KL
Sbjct: 266 TYNALVNCFCKFGRMERAYSYFAEMKRE-GVMANVVTFSTFVDAFCKNGMVREAMKLFAQ 324
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV---SK 280
+ P++ L+ G C G+LD+A L EM + G L V Y ++D + K
Sbjct: 325 MRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGK 384
Query: 281 LCRKKDPFRL------------------------DSE-AEKVLLDMEYNGVPRNVETFNV 315
+ +D FRL +SE A +L +M+ G+ +V +
Sbjct: 385 VAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGA 444
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI LC +++ ++A L +M E G PN + ++ + ++A + E ++ +M +G
Sbjct: 445 LIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSG 504
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ Y + LC I++A+S F KM G P+ + Y L+ C + R+DKA
Sbjct: 505 FRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAV 564
Query: 436 ALFDEAVRNGVEV 448
L DE + G+ +
Sbjct: 565 LLLDEMIDKGMSL 577
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 8/254 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++++ LC+ G + A L+ + A PD + LI G+ G+L+E ++L EM
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM 255
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G V YN +++C K R + + +E M+ GV NV TF+ +
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAE-------MKREGVMANVVTFSTFVDA 308
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
CK +A+KLF +M G PNE T+ L+ +A R+ + + + M G +
Sbjct: 309 FCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLN 368
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + LC ++ +A VF M+ G + Y L+ + ++A +L
Sbjct: 369 VVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLS 428
Query: 440 EAVRNGVEVKPKEY 453
E G+E+ Y
Sbjct: 429 EMKDKGMELDVSLY 442
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 4/175 (2%)
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC++ D +EA +L M+ G +V T+N LI K E+ KL M G
Sbjct: 204 LCKEGDL----AEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P+ T+ L+ + R+ MK G + F+ C + +AM
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+F +M+ G P+ TY L+ C R+D A L +E V+ GV + Y V
Sbjct: 320 KLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTV 374
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV TFN++I LCK +A L RM GC P+ T+ LI + + E ++++
Sbjct: 193 NVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLV 252
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M+ G Y + C R+E+A S F +MK +G + T+ + +C +
Sbjct: 253 GEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKN 312
Query: 429 NRVDKANALFDEAVRNGVEVKPKE 452
V +A LF + G +KP E
Sbjct: 313 GMVREAMKLFAQMRMKG--MKPNE 334
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 38/332 (11%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + + +V L T +D L + G+ + F MER G + ++
Sbjct: 348 GRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMER-AGIRANELL 406
Query: 202 LRLVVE-----KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
++ K E + +E +KD E+ D + LI G C KLDEAK L
Sbjct: 407 YTTLIHGHFVYKNSERALSLLSE--MKDKGMEL--DVSLYGALIWGLCNLQKLDEAKSLL 462
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDP-----------FRLDSEAEKVLLD----- 300
+M G + V Y I+D K ++ + FR + L+D
Sbjct: 463 NKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKA 522
Query: 301 ------------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
M G+ NV+ + L+ LCK R + A+ L M + G +
Sbjct: 523 GSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVC 582
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + + + +M ++G + Y F+ C + I++A V +M
Sbjct: 583 TSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIE 642
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+G PD+ Y+ L+ K +++A L +E
Sbjct: 643 NGITPDAVVYNCLINKCQKLGNMEEAAILQNE 674
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
VP N T N ++ L + R SE A +LF ++ PN TF ++I L + + E
Sbjct: 159 VPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEAR 214
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ RMK+ G + Y + +E+ + +M+ G PD TY+ L+ +
Sbjct: 215 ALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCF 274
Query: 426 CAHNRVDKANALFDEAVRNGV 446
C R+++A + F E R GV
Sbjct: 275 CKFGRMERAYSYFAEMKREGV 295
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG----YASYAEKLVKDT 225
+D +A + ++ + ++M D GF+ + + +V+ LC+ G S+ K+V D
Sbjct: 481 MDACFKARKESEAIALLQKM-MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV-DL 538
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
E P+ + L+ G C +G+LD+A L EM G L V ++D K +
Sbjct: 539 GLE--PNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQ 596
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D F L ++ M +G+ ++ + + C + ++A ++ M E G P+
Sbjct: 597 DAFALKAK-------MINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDA 649
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+ LI + + E + + M+S
Sbjct: 650 VVYNCLINKCQKLGNMEEAAILQNEMES 677
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 12/278 (4%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+ ID L + G L F +ME +YG + D +V LC +G A+ L++
Sbjct: 180 TTIIDSLCKNGHVDNALSLFNQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMM 238
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+I PD + LI + +GKL +AK L EM + Y + ++ LC +
Sbjct: 239 KRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL---INGLCMEG 295
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
RLD EA ++ ME G +V + LI+ CK ++ EDA+K+FY M + G N
Sbjct: 296 ---RLD-EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNT 351
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI+ + E+ M S G + Y L LC ++ +A+ +FE
Sbjct: 352 ITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFED 411
Query: 406 MK---TDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
M+ DG P+ TY++L+ C + +++KA +F +
Sbjct: 412 MQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGD 449
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 137/342 (40%), Gaps = 22/342 (6%)
Query: 127 FSHTDET--------LSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKT-LASC---IDRLV 174
FSH E+ + + + K F + + L + +++G L +C ++
Sbjct: 59 FSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVIN-LCKHLQIMGVSNDLYTCNLLMNCFC 117
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDD 233
++ +P F ++ + GF+ D + ++ C A +V I PD
Sbjct: 118 QSSQPCLASSFLGKLMK-LGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDV 176
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
I +I C +G +D A L +M G V Y +++ + R +D
Sbjct: 177 VIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRD------- 229
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A+ +L M + +V TFN LI K + DA +L+ M + PN T+ LI
Sbjct: 230 ADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLIN 289
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L R+ E +M M++ G Y + C +++E AM +F +M G
Sbjct: 290 GLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG 349
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ TY L+ + + + A +F V GV + Y V
Sbjct: 350 NTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNV 391
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 15/285 (5%)
Query: 133 TLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + D F G+ D K +++ ++ T S I+ L GR + F M
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGK 248
E F D + ++ C+ A K+ + + + + I LI+G+ + GK
Sbjct: 308 ETKGCFP-DVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGK 366
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+ A+ + M G YN +L C+ + + + +K E +GVP
Sbjct: 367 PNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQK----REIDGVPP 422
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N+ T+NVL+ LC + E A+ +F M + T+ ++I+ + +A +V + +
Sbjct: 423 NIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLF 482
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEKMKTDG 410
+ S G K + + T + G+ R + +A +F KMK DG
Sbjct: 483 CSLPSKGV---KPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 10/295 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
+ A+ + RL A L R + D + +V C++G + A ++
Sbjct: 2 AASTAAVVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVF 61
Query: 223 KDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ P++ LI G+ V G + L EM R G E YNC+ + +
Sbjct: 62 DVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCL---IGEW 118
Query: 282 CRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
CR + ++ ++L D M GV NV ++N+LI+ LC+ + +DA++LF M G
Sbjct: 119 CRTGE-----FKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREG 173
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ TF +LI +A ++ ++MK+AG Y E + C + I +A+
Sbjct: 174 IRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAV 233
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
F MK G P TY +L+ + N +D+A + E + G+EV + Y V
Sbjct: 234 RAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGV 288
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 123/293 (41%), Gaps = 27/293 (9%)
Query: 184 GFFERMERDYGF------KRDKD-----SLRLVVEKLCENGYASYAEKL-----VKDTAN 227
G+F R R+ GF +RD + ++ + C G A L VK +
Sbjct: 82 GYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVH 141
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ + +LI G C KL +A +L M R G V +N ++D K + +
Sbjct: 142 NVVSYN----ILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANA 197
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
++ M+ G+P +V T+N LI C++R A++ F M E G P + T
Sbjct: 198 LHFFNQ-------MKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVT 250
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +LI + + + M+ M+ AG + + Y L LC ++ A +F+ M
Sbjct: 251 YTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMD 310
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
G P+S YD+++ + KA L E +NG+ Y + R L
Sbjct: 311 LKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLL 363
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 104/294 (35%), Gaps = 70/294 (23%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + S +++ LC + A +L + E I P +LLI G+ GK+ A
Sbjct: 138 GVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANA 197
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD-------------------------- 286
+M G V YN + + CR +D
Sbjct: 198 LHFFNQMKAAGLPPSVVTYN---ELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTIL 254
Query: 287 --PFRLDSEAEKVLL---DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
F ++E ++ + +ME G+ +V+++ VL+ LC + A KLF M G
Sbjct: 255 IAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGV 314
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN + D MI GY Y +A+
Sbjct: 315 KPNSVLY----------------DMMI-----YGYGREGSSY--------------KALR 339
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ +M+ +G P+ +Y L + C + +A AL D+ G++ R+
Sbjct: 340 LIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRI 393
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 12/192 (6%)
Query: 141 FGRRKDF-KAIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
F R +D +A+ FL + L P T I + + ME+ G +
Sbjct: 223 FCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKA-GLEV 281
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D S +++ LC G +A KL + + P+ + D++I G+ +G +A RL
Sbjct: 282 DVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLI 341
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM + G + VA C+ + LC + EAE ++ DME+ G+ + +L
Sbjct: 342 MEMRKNGL-IPNVASYCLT--IRLLCNEGKC----QEAEALIDDMEHAGLQTSETICRIL 394
Query: 317 ISNLCKIRRSED 328
+ ++ S D
Sbjct: 395 LDAKARLHGSTD 406
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTA 226
+ ID + + + F M G D + ++ C G + A L K
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISK-GISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRK 284
I PD ++L+ +C DGK+ E K + M + G + V YN ++D C+ K K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
A+ + M GV ++++++++I+ CKI++ ++A+ LF M P+
Sbjct: 349 ---------AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ LI L ++ R+ +++D+M G + Y L LC I ++++A+++
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
K+K G P+ TY +L+ C +++ A +F+ + G + Y +
Sbjct: 460 KLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTI 510
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 9/225 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + ++I G+C K DEA L +EM+R V Y+ ++D +SK R
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI------ 416
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
S A +++ M GVP + T+N ++ LCKI + + AI L ++ + G PN T+ +
Sbjct: 417 -SYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSI 475
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LIK L Q+ ++ + ++ + + G+ + Y + C +A+++ KM+ +G
Sbjct: 476 LIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD++TY++++ + D A L E + G V+P++ +
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG--VRPRQIAI 578
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 128/306 (41%), Gaps = 30/306 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
+ LV++ VL ++ME G K + + +++ C+ G +A K
Sbjct: 92 LGSLVKSKHYHTVLYLSQKMEFR-GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMG 150
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD LIKG C+ G++ +A ++ GF ++Y ++ + K+ +
Sbjct: 151 YVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAAL 210
Query: 289 ----------------------------RLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L +EA + +M G+ +V T++ LIS
Sbjct: 211 DLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGF 270
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C + + DAI LF +M P+ TF +L+ + + ++ EG + D M G
Sbjct: 271 CILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF 330
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++ + +A S+F M G NPD ++Y +++ +C + D+A LF E
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Query: 441 AVRNGV 446
R +
Sbjct: 391 MHRKNI 396
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 98/213 (46%), Gaps = 9/213 (4%)
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C++LI +C G + A + ++ + G+ T+ + + + LC K + +
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTL---IKGLCLKGQIQQAFLFHD 179
Query: 296 KVL-LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
KV+ L ++ + ++ LI LCK+ + A+ L R+ PN + +I S
Sbjct: 180 KVVALGFHFDQI-----SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ + V E ++ M S G + Y ++ C + ++ A+ +F KM + PD
Sbjct: 235 MCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPD 294
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
T+++L+ +C ++ + +FD ++ G++
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L+++M G + V N +++C +L PF A+ +L M Y VP + TF
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLI--PFAFSVFAK--ILKMGY--VPDTI-TFT 159
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LI LC + + A ++ G H ++ ++ LI L +VGE +D ++
Sbjct: 160 TLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGL---CKVGETRAALDLLQRV 216
Query: 375 GYAIGKKD---YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ + + Y + +C ++ + +A +F +M + G +PD TY L++ +C ++
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKL 276
Query: 432 DKANALFDEAVRNGVEVKPKEYRVD 456
+ A LF++ + +KP Y +
Sbjct: 277 NDAIDLFNKMILE--NIKPDVYTFN 299
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S ID L ++GR + L ++M D G + +++ LC+ A L+
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQM-HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTK 460
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKL 281
++ I P+ +LIKG C GKL++A+++ + G L Y ++ CV L
Sbjct: 461 LKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGL 520
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+EA +L ME NG + +T+ ++I +L K ++ A KL M G
Sbjct: 521 F---------NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGV 571
Query: 342 HPNE 345
P +
Sbjct: 572 RPRQ 575
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 174/418 (41%), Gaps = 16/418 (3%)
Query: 41 LSKPFS-SKPTSNPKT-IDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPS 98
+SKPF+ + P KT D L G ++ L + L L + T
Sbjct: 36 ISKPFTENSPKEQLKTRAVDGFLSPGEKLRGVFIQRLRGKA---AIELALTNVGIDLTID 92
Query: 99 LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD-N 157
+V +N G A++ F +W + +T + GRRK + + L D +
Sbjct: 93 IVSEVINRGNLGGEAMVIFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFVVKVLKDMH 152
Query: 158 KEVLGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
+ + P +TL+ +D ++A + ++ + F +E ++G K D +SL ++++ LC+ +
Sbjct: 153 IQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLE-EFGGKCDTESLNVLLQCLCQRSHV 211
Query: 216 SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A I + +++I GW GK+ E +R + M GF + ++ ++
Sbjct: 212 GAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLI 271
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ + + R D A +V ME G N +N LISN R ++ +K +
Sbjct: 272 EGLGRAGRIDD-------AVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNF 324
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M C PN T+ LI + +A +V + EM+D M G F+ LC
Sbjct: 325 MVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGP 384
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
AM +++K + G Y LL+ + + L+DE +G + Y
Sbjct: 385 PHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVY 442
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 132/278 (47%), Gaps = 9/278 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + L RA R + L M G + + +++ LC+ G A ++ D
Sbjct: 263 TYNSLLHGLCRARRVSDALALMRDMTC-RGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 321
Query: 225 TANEI-FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ PD I ++LI G C ++DE+ L R GG + V Y+ + + LCR
Sbjct: 322 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV---IYGLCR 378
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RLD EA ++LL ++ G P +V ++ LI LCK + ++A L+ M GC
Sbjct: 379 SN---RLD-EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDA 434
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L +A RV E ++ RM G Y + LC + +++A+ +
Sbjct: 435 DVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELV 494
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
E+M+ P + TY++L+ C RVD A L ++A
Sbjct: 495 EEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQA 532
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 139/324 (42%), Gaps = 25/324 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERM------ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+D L R G+ + + F+ M + D + + ++++ LC+ S A +L++
Sbjct: 156 LDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLE 215
Query: 224 DT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
A PD +L+ G C + K+ A + REM G V YN +L LC
Sbjct: 216 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLL---HGLC 272
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R R S+A ++ DM G NV T+ LI LCK+ R +DA + M + G
Sbjct: 273 RA----RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT 328
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ + +LI L +A +V E ++ R S G Y + LC R+++A +
Sbjct: 329 PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRL 388
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY--------- 453
+K+ G PD Y L+ C +VD+A L++ +G + Y
Sbjct: 389 LLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCK 448
Query: 454 --RVDPRYLKKPIAVKKGKKRETL 475
RVD +L V+ G T+
Sbjct: 449 AGRVDEAHLLLARMVRMGTPPSTM 472
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 16/278 (5%)
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKIC 236
R Q L M RD+G + + + +++ LC+N A++L + + E P
Sbjct: 94 RLDQALAILHEM-RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTY 152
Query: 237 DLLIKGWCVDGKLDEAKRLAREMY-RGGFEL------GTVAYNCILDCVSKLCRKKDPFR 289
+ L+ G GKL+ A L +EM R ++ + Y+ ++D + K R
Sbjct: 153 NTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRV----- 207
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
S+A ++L M+ G +V T+ +L+ LCK + A ++ M + GC PN T+
Sbjct: 208 --SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 265
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
L+ L +A RV + ++ M G Y + LC + R++ A ++ M
Sbjct: 266 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 325
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G PD Y++L+ C ++VD++ AL AV G++
Sbjct: 326 GGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 175/427 (40%), Gaps = 55/427 (12%)
Query: 58 DPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGF 117
+P+ V SL L +N E D R +F H+ S E +++ +
Sbjct: 111 EPNVVTYNSLIDGLCKNNEPD------RAQELFEHMK------------SVECSPSMVTY 152
Query: 118 NHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAG 177
N L + ++ F + RR HD D++ T + ID L +A
Sbjct: 153 NTLLDGLFRTGKLERAMALFQEMLDRRS-----HDM--DDRCSPNVITYSVLIDGLCKAN 205
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKIC 236
R +Q + E M + G D + ++V+ LC+ + A +++++ + P+
Sbjct: 206 RVSQAVELLESM-KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY 264
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA-- 294
+ L+ G C ++ +A L R+M G V Y ++D + K+ R KD + ++
Sbjct: 265 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 324
Query: 295 -----EKVLLDMEYNGVPR---------------------NVETFNVLISNLCKIRRSED 328
+ ++ +M NG+ + +V T++ +I LC+ R ++
Sbjct: 325 KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 384
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A +L + GC P+ + LI L +A +V E ++ + M G Y +
Sbjct: 385 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLID 444
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
LC R+++A + +M G P + TY+ L+ C N +D+A L +E R+
Sbjct: 445 GLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 504
Query: 449 KPKEYRV 455
Y +
Sbjct: 505 SAVTYNI 511
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 127/304 (41%), Gaps = 14/304 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ID L + GR M D G D +++ LC+ + L++
Sbjct: 298 TYGTLIDGLCKVGRVKDACAMLADM-IDKGGTPDLMIYNMLINGLCKADQVDESIALLRR 356
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I PD +I G C +LDEA RL + G + Y+ ++D + K +
Sbjct: 357 AVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK 416
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ F L M +G +V T++ LI LCK R ++A L RM G P
Sbjct: 417 VDEAFDLYEV-------MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 469
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LIK L + E E+++ M+ + A Y + +C +ER++ A+ +
Sbjct: 470 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLL 529
Query: 404 EKMK-----TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR 458
E+ K G D+ Y L+ C RV +A F E + NGV Y +
Sbjct: 530 EQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLE 589
Query: 459 YLKK 462
LKK
Sbjct: 590 GLKK 593
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 21/247 (8%)
Query: 210 CENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C G A++ + + + P+ +C +LI G C + +A R R M G T
Sbjct: 20 CRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADT 79
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y +L S L ++K RLD +A +L +M +G NV T+N LI LCK +
Sbjct: 80 VIYTALL---SGLWKEK---RLD-QALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDR 132
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG----DEMIDRM------KSAGYAI 378
A +LF M C P+ T+ L+ L++ ++ EM+DR + + I
Sbjct: 133 AQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVI 192
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC R+ QA+ + E MK G +PD TY +L+ C ++V A +
Sbjct: 193 ---TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 439 DEAVRNG 445
E + G
Sbjct: 250 REMLDAG 256
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 101/255 (39%), Gaps = 41/255 (16%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I D I L+ G + +LD+A + EM G E V YN ++D LC+ +P
Sbjct: 75 IVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID---GLCKNNEPD 131
Query: 289 R----------LDSEAEKVLLDMEYNGVPR----------------------------NV 310
R ++ V + +G+ R NV
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T++VLI LCK R A++L M GC P+ T+ +L+ L + ++V E++
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M AG Y L LC R+ A+++ M G P+ TY L+ C R
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311
Query: 431 VDKANALFDEAVRNG 445
V A A+ + + G
Sbjct: 312 VKDACAMLADMIDKG 326
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L++G+C G++D+A+R EM + ++D LC+ K +A +
Sbjct: 15 LLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILID---GLCKAKRSI----DALRCF 67
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ +G+ + + L+S L K +R + A+ + + M + GC PN T+ LI L +
Sbjct: 68 RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM-------KTDGH 411
E+ + MKS + Y L L ++E+AM++F++M D
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+P+ TY +L+ C NRV +A L + G Y +
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTI 231
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 8/276 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L + G + F ++ + +K + + +++ C+ G + AE L+
Sbjct: 288 THTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGR 347
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI G C G D A L +M GF YN I + C+
Sbjct: 348 MVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAI---IGGFCK 404
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA KVL G+ + T+ +LI+ CK A+ LF +M E CHP
Sbjct: 405 KGKI----QEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHP 460
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +I Q ++ + ++ D+ S G K+ Y + C + ++ A+ VF
Sbjct: 461 DIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVF 520
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
E+M G PDS TY L++ C +R+++A ALF+
Sbjct: 521 ERMVQHGCLPDSITYGALISSLCKESRLEEARALFE 556
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 10/273 (3%)
Query: 186 FERMERDYGFKR-DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGW 243
F+ M R G R D S R +V C G A+ L+ + F D C ++++ +
Sbjct: 167 FDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAF 226
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G+ L R M G V Y+ +D LC + +A VL +M
Sbjct: 227 CRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWID---GLCERG----YVKQAFHVLEEMVG 279
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIKSLYQAARVG 362
G+ NV T LI LCKI E A +LF ++ + + PN T+ V+I + ++
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ ++ RM G A Y + C ++A + KMK +G P+ TY+ ++
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++ +A + A G+ + Y +
Sbjct: 400 GGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTI 432
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 131/313 (41%), Gaps = 8/313 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR ++ A+ + L T + R GR V F RM + G + +
Sbjct: 195 GRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMS-EMGTPPNMVN 253
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LCE GY A ++++ + + P+ LI G C G ++ A RL ++
Sbjct: 254 YSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLV 313
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ V ++ + C++ R AE +L M G+ N T+ LI
Sbjct: 314 KSSSYKPNVHTYTVM--IGGYCKEGKLAR----AEMLLGRMVEQGLAPNTNTYTTLIHGH 367
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + A +L +M G PN T+ +I + ++ E +++ S G + K
Sbjct: 368 CKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDK 427
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y +T C I A+ +F++M +PD TY ++ +C +++++ LFD+
Sbjct: 428 VTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDK 487
Query: 441 AVRNGVEVKPKEY 453
+ G+ + Y
Sbjct: 488 CLSIGLVPTKQTY 500
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 134/327 (40%), Gaps = 17/327 (5%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTL---ASCIDRLVRAGRPTQV 182
F T + F R+ F+ + D E+ P + ++ ID L G Q
Sbjct: 211 GFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQA 270
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDL 238
E M G K + + +++ LC+ G+ A KLVK ++ + P+ +
Sbjct: 271 FHVLEEMVGK-GLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYK--PNVHTYTV 327
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G+C +GKL A+ L M G T Y ++ K F L ++
Sbjct: 328 MIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNK----- 382
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ G N+ T+N +I CK + ++A K+ G H ++ T+ +LI +
Sbjct: 383 --MKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQ 440
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ ++ +M Y + C ++EQ+ +F+K + G P +TY
Sbjct: 441 GHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTY 500
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
++ +C ++ A +F+ V++G
Sbjct: 501 TSMIAGYCRLGKLTSALKVFERMVQHG 527
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 13/168 (7%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLI-------SNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
EA +LL++ +G+P VET N ++ R + D + G P+
Sbjct: 126 EAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMA----RAAGGVRPDH 181
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+F L+ + R E D ++ M + G+ + + C R +F +
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRR 241
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
M G P+ Y + C V +A + +E V G +KP Y
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKG--LKPNVY 287
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD 246
RM G DK + +++ + C+ G+ + A L K A + PD +I +C
Sbjct: 416 RMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQ 475
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
+++++++L + G Y + ++ CR +L S A KV M +G
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSM---IAGYCRLG---KLTS-ALKVFERMVQHGC 528
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+ T+ LIS+LCK R E+A LF M + P + T + L + ++
Sbjct: 529 LPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVS 588
Query: 367 MIDRM 371
+DR+
Sbjct: 589 FLDRL 593
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T S + GR + L + RM + GF+ + + ++ LC +G A + K
Sbjct: 321 TFTSLMKGYFMRGRVLEALNIWNRMAEE-GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N P+ LI G+ G L A + +M G V Y + V+ LCR
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSM---VNVLCR 436
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ S+A ++ M + P N TFN I LC R E AI LF +M ++GC P
Sbjct: 437 SS----MFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSP 492
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ ++ L + R+ E E++ M+ G + Y C + + E+A+ +
Sbjct: 493 NIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLL 552
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
KM G PD+ TY+ L +C +V A L D+ G
Sbjct: 553 GKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGG 594
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 147/347 (42%), Gaps = 30/347 (8%)
Query: 127 FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKT----LASCIDRLVRAGRPTQV 182
F HT T + GR D + +L+ ++ G + I+ R G Q
Sbjct: 75 FQHTQLTYQIMIEKLGRECDVDGVQ-YLLQQMKLEGISCSEDLFINVINTYRRVGLAEQA 133
Query: 183 LGFFERMERDYGFK-RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIK 241
L F R+ R++G + K L+ L EN + + P+ ++L+K
Sbjct: 134 LKMFYRI-REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLK 192
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD---------- 291
C + ++D A +L EM G E V+Y ++ +SKL + ++ L
Sbjct: 193 ALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVY 252
Query: 292 -------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
E +L M G+ NV T++ +IS+L I E A+ ++ +M
Sbjct: 253 NALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFV 312
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
GC PN TF L+K + RV E + +RM G+ Y + LC ++ +
Sbjct: 313 RGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGE 372
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A+SV KM+ +G +P+ TY L+ + + A+ ++++ + NG
Sbjct: 373 AVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+KG+ + G++ EA + M GFE VAYN + + LC EA V
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTL---IHGLCSHGKM----GEAVSVS 377
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME NG NV T+ LI K A +++ +M GC PN + ++ L ++
Sbjct: 378 SKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRS 437
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + +I++M + + F+ LC R+E A+++F +M+ G +P+ +TY
Sbjct: 438 SMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTY 497
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ ++ NR+ +A L E G+E+ Y
Sbjct: 498 NEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYN 533
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 10/260 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID +AG + +M + G + +V LC + S A L++
Sbjct: 391 TYGALIDGFAKAGDLVGASEIWNKMMTN-GCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK 449
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P + + + IKG C G+++ A L +M + G YN +LD + K R
Sbjct: 450 MSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENR 509
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K+ L +E ME G+ N+ T+N + C + + E+A+KL +M G P
Sbjct: 510 IKEALELVTE-------MEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKP 562
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK-KDYYEFLTRLCGIERIEQAMSV 402
+ T+ L + +V +++D++ + G + + Y L +C +E+A+
Sbjct: 563 DAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLY 622
Query: 403 FEKMKTDGHNPDSETYDLLM 422
+KM +G ++ T++ L+
Sbjct: 623 LDKMLNEGICLNAATWNALV 642
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ + LI G C GK+ EA ++ +M R G Y ++D +K D
Sbjct: 352 PNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAK---AGDLVG- 407
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A ++ M NG NV + +++ LC+ A L +M C PN TF
Sbjct: 408 ---ASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNT 464
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
IK L + RV + +M+ G + K Y E L L RI++A+ + +M+ G
Sbjct: 465 FIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKG 524
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ TY+ + +C + ++A L + + GV+
Sbjct: 525 MELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVK 561
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 97/259 (37%), Gaps = 42/259 (16%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ + + LI G+C + K+ E L +M G + + Y+ ++ +S + +
Sbjct: 247 PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE----- 301
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A V M G NV TF L+ R +A+ ++ RM E G PN +
Sbjct: 302 --LALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNT 359
Query: 351 LIKSLYQAARVGEG-------------------DEMIDRMKSAGYAIGKKD--------- 382
LI L ++GE +ID AG +G +
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419
Query: 383 -------YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC QA S+ EKM TD P++ T++ + C RV+ A
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479
Query: 436 ALFDEAVRNGVEVKPKEYR 454
LF + + G K Y
Sbjct: 480 NLFCQMEQYGCSPNIKTYN 498
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 35/154 (22%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+ +L M+ G+ + + F +I+ ++ +E A+K+FYR+ E+GC P +
Sbjct: 98 VQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIY----- 152
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ ++D M S R + ++ MK DG P
Sbjct: 153 -----------NHLLDAMLSE-------------------NRFQMIEPIYSNMKRDGKEP 182
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ TY++L+ C +NRVD A L E G E
Sbjct: 183 NVYTYNILLKALCKNNRVDGACKLLVEMSNKGCE 216
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I G + LG F MER+ G + + +++ C+ G A L+K +++
Sbjct: 17 IRGFCSVGELQKGLGCFGEMERN-GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 75
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ I +++I G C +G + EA + EM GF V YN +L+ C++ +
Sbjct: 76 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN---GYCKEGNF- 131
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A + +M NGV +V T+ LI+++CK R A++ F +M G PNE T+
Sbjct: 132 ---HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + E +++ M +G++ Y F+ C +ER+E+A+ V ++M
Sbjct: 189 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 248
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PD +Y +++ +C +D+A + E V GV
Sbjct: 249 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 138/336 (41%), Gaps = 30/336 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + GR + G + M G + + S +++ LC G A +++++
Sbjct: 47 TYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYNVIINGLCREGSMKEAWEILEE 105
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK--- 280
+ F PD+ + L+ G+C +G +A + EM R G V Y +++ + K
Sbjct: 106 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 165
Query: 281 LCRKKDPF-------------------------RLDSEAEKVLLDMEYNGVPRNVETFNV 315
L R + F L +EA ++L +M +G +V T+N
Sbjct: 166 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 225
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
I C + R E+A+ + M E G P+ ++ +I + + +M M G
Sbjct: 226 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 285
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ Y + LC + R+ +A + ++M G PD TY L+ +C ++KA
Sbjct: 286 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 345
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
L DE + G Y V L K ++ K+
Sbjct: 346 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
V NV T+N+LI C + + + F M GC PN T+ LI + + R+ E
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ M S G Y + LC +++A + E+M G PD TY+ L+ +
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 426 CAHNRVDKANALFDEAVRNGV 446
C +A + E VRNGV
Sbjct: 126 CKEGNFHQALVIHAEMVRNGV 146
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%)
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+ME NG NV T+N LI CK+ R ++A L M G PN ++ V+I L +
Sbjct: 35 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG 94
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+ E E+++ M G+ + Y L C QA+ + +M +G +P TY
Sbjct: 95 SMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYT 154
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
L+ C +++A FD+ G+ + Y
Sbjct: 155 ALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 9/275 (3%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
IH +V N T + I+ + +A + + FF++M R G + ++ + +++
Sbjct: 136 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RIRGLRPNERTYTTLIDG 194
Query: 209 LCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
G + A +++ + F P + I G CV +++EA + +EM G
Sbjct: 195 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 254
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V+Y+ I +S CRK + R A ++ +M GV + T++ LI LC++RR
Sbjct: 255 VVSYSTI---ISGFCRKGELDR----AFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A L M + G P+E T+ LI + + + + D M G+ Y +
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
L R +A + K+ + P TYD L+
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 7/208 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+++ LI G+ G L+EA R+ EM GF V YN + L R +
Sbjct: 183 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME----- 237
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA V+ +M G+ +V +++ +IS C+ + A ++ M E G P+ T+
Sbjct: 238 --EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 295
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI+ L + R+ E ++ M G + Y + C + +A+ + ++M G
Sbjct: 296 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 355
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALF 438
PD+ TY +L+ R +A L
Sbjct: 356 FLPDAVTYSVLINGLNKQARTREAKRLL 383
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 30/231 (12%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D + +++ LCE + A L ++ + P D+ LI +CV+G L++A
Sbjct: 285 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKA 344
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN-GVPRNVE 311
L EM GF V Y+ +++ ++K R + EA+++L + Y VP +V
Sbjct: 345 LHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR-------EAKRLLFKLIYEESVPSDV- 396
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T++ LI N I + + LIK + E D + + M
Sbjct: 397 TYDTLIENCSNIEFK--------------------SVVALIKGFCMKGLMHEADRVFESM 436
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ G+ Y + C + +A +++++M G P + T L+
Sbjct: 437 VERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 487
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 138/313 (44%), Gaps = 13/313 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + + D + V T + ID ++GR LG ME++ G D +
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQN-GCNPDDWT 356
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ LC G AE+L+ F I LI G+C ++D+A R+ M
Sbjct: 357 YNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L AY +++ + K CR K EA++ L +M NG+ NV + +I
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLK-------EAKETLNEMFANGLAPNVVIYTSIIDGY 468
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK+ A+++F M GCHPN T+ LI L Q ++ + +I +M+ G G
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGV 528
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C + A +FE M+ +G PD + Y++L C R ++A +
Sbjct: 529 IAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL-- 586
Query: 441 AVRNGVEVKPKEY 453
VR GV + Y
Sbjct: 587 -VRKGVVLTKVTY 598
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 136/343 (39%), Gaps = 25/343 (7%)
Query: 107 SPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTL 166
SP L F W+ + F HT + + RR+ A +D K VL +
Sbjct: 62 SPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRA-PANYD-----KLVLSMISC 115
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKR---DKDSLRLVVEKLCENGYASYAEKLVK 223
+ + + A Q + R G KR L + L Y KL
Sbjct: 116 SGTAEDVREAVDAIQAI-------RRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYS 168
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E + PD + +I +C G L A R + G ++ T N +L C
Sbjct: 169 HLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALL---LGYC 225
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R D +A +L+ M G RN ++ +LI L + R +A+ L + M + GC
Sbjct: 226 RTSDL----RKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCS 281
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N + +LIK L + R+ + ++D M G Y + C R++ A+ +
Sbjct: 282 LNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI 341
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M+ +G NPD TY+ L+ C ++D+A L + A+ G
Sbjct: 342 KALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG 383
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 40/284 (14%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G A ++ K +E P+ LI G D KL +A L +M G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
G +AY ++ K + FRL EK NG+ + + +NVL LCK
Sbjct: 524 ITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEK-------NGLTPDEQAYNVLTDALCKS 576
Query: 324 RRSEDAIKLFYRMG--------------------------------EWGCHPNETTFLVL 351
R+E+A R G GC + T+ VL
Sbjct: 577 GRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVL 636
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+++L + ++ E ++D+M +G Y ++ + + + A S+F +M + GH
Sbjct: 637 LQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH 696
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P + TY + ++ +C ++++A L E R+GV Y +
Sbjct: 697 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHI 740
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 15/266 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L++ + + + +M+ D G + +++ C+ A +L +
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQED-GITPGVIAYTTLIQGQCKKHEFDNAFRLFEM 553
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + PD++ ++L C G+ +EA + R G L V Y ++D SK
Sbjct: 554 MEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSK--- 607
Query: 284 KKDPFRLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+++ VL++ N G ++ T++VL+ LCK ++ +A+ + +M G
Sbjct: 608 -----AGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK 662
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N + ++I + + + + + M S+G+ Y F++ C I +IE+A +
Sbjct: 663 CNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHL 722
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAH 428
+M+ DG PD TY + + C H
Sbjct: 723 IGEMERDGVTPDVVTYHIFING-CGH 747
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 137/341 (40%), Gaps = 25/341 (7%)
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
++ + TD + + + FLV VL T S +D +AG E+M
Sbjct: 563 EQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKL 249
+ G K D + ++++ LC+ + A ++ T + + + ++I +GK
Sbjct: 623 NE-GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKH 681
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
D AK L EM G + Y + K+ + + EAE ++ +ME +GV +
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIE-------EAEHLIGEMERDGVTPD 734
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK-----SLYQAARVGEG 364
V T+++ I+ + + A RM + C PN T+ +L+K SL A +
Sbjct: 735 VVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTS 794
Query: 365 D-----------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
++++RM G Y + C R+E+A + + M +P
Sbjct: 795 GMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISP 854
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ E Y +L+ C K + + + G + + + Y
Sbjct: 855 NEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYH 895
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 9/276 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I G + L F++RM R+ G + + ++ LC A +
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIRE-GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N P+ + LI G+ G LD A + M G VAY C++D LCR
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV---LCR 433
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ ++A ++ +M+ P N TFN I LC R + AIK+F +MG GC P
Sbjct: 434 NS----MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFP 489
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TT+ L+ SL + R GE ++ M+ G + Y + C + +A+ +
Sbjct: 490 NTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELL 549
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
KM G PD+ T ++++ +C +V+ A L D
Sbjct: 550 GKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMD 585
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 14/277 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANE 228
+D L+ R + + M++D G + + + ++++ LC+N A KL V+ ++
Sbjct: 153 LDALLDENRFQMINPIYSNMKKD-GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG 211
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD+ LI C GK+ EA+ LA F YN +++ V K ++ F
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEARELAMS-----FTPSVPVYNALINGVCKEYTFEEAF 266
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L L +M G+ NV ++ +I+ L E ++ + +M GC PN TF
Sbjct: 267 QL-------LDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTF 319
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LIK + E + DRM G Y + LC + A+SVF +M+
Sbjct: 320 TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+G P+ TY L+ + +D A+ +++ + +G
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 7/216 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LIKG+ + G EA M R G VAYN ++ LC K+ +A V
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH---GLCSKRSL----GDAVSVF 374
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME NG NV T++ LI K + A +++ M GCHPN + ++ L +
Sbjct: 375 NQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRN 434
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + +I+ M+ + F+ LCG R++ A+ VF++M G P++ TY
Sbjct: 435 SMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTY 494
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ L+ R +A L + G+E+ Y
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYN 530
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 9/260 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T ++ ID +AG + M +G + + +V+ LC N + A L++
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWM-ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIE 445
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ E P + + + IKG C G++D A ++ +M G T YN +LD + K
Sbjct: 446 NMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R + F L + DME+ G+ N+ T+N +I C +A++L +M G
Sbjct: 506 RFGEAFGL-------VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T ++I + + +V +++DR+ + + Y ++ +C +E+A+
Sbjct: 559 PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVY 618
Query: 403 FEKMKTDGHNPDSETYDLLM 422
+M ++G +P+ T+++L+
Sbjct: 619 LRRMLSEGISPNVATWNVLV 638
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 108/287 (37%), Gaps = 46/287 (16%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G D+ S ++ LC+ G A +L A P + + LI G C + +EA
Sbjct: 211 GCDPDEVSYTTLISSLCKLGKVKEAREL----AMSFTPSVPVYNALINGVCKEYTFEEAF 266
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+L EM G + ++Y I++ +S D ++ VL M G N+ TF
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALS------DAGNVELSL-AVLAKMFARGCSPNLHTF 319
Query: 314 NVLI-----------------------------------SNLCKIRRSEDAIKLFYRMGE 338
LI LC R DA+ +F +M
Sbjct: 320 TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
GC PN T+ LI +A + E+ + M + G Y + LC Q
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A + E M+ + P++ T++ + C RVD A +FD+ +G
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 123/311 (39%), Gaps = 38/311 (12%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A + RL T L +F+ + FK + ++++EKL + L++
Sbjct: 44 ADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMK 103
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
E I + + +I + G ++A + M + YN ILD + +
Sbjct: 104 LEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDAL----LDE 159
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ F++ + +M+ +G+ NV T+N+L+ LCK R + A KL M GC P+E
Sbjct: 160 NRFQM---INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDE 216
Query: 346 TTFLVLIKSLYQAARVGEGDE------------------------------MIDRMKSAG 375
++ LI SL + +V E E ++D M + G
Sbjct: 217 VSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + L +E +++V KM G +P+ T+ L+ + +A
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Query: 436 ALFDEAVRNGV 446
+D +R GV
Sbjct: 337 DFWDRMIREGV 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+ ++I L R + L +M G +E F+ +I S +A + + RM
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ K Y L L R + ++ MK DG P+ TY++L+ C +NRV
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
D A+ L E G + Y L K VK+ ++
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE 237
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 82/227 (36%), Gaps = 50/227 (22%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L R Q E M+ + + + ++ LC +G +A K+ N
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVE-NCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL---DCVSKLCRKK 285
FP+ + L+ D + EA L ++M G EL V YN I+ C L
Sbjct: 487 CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML---- 542
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM--GEW---- 339
EA ++L M G + T N++I CK + AI+L R+ G+W
Sbjct: 543 ------GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596
Query: 340 -----------------------------GCHPNETTFLVLIKSLYQ 357
G PN T+ VL++ L+
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFS 643
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A K M+ V V+ +N ++ L R + ++ M + G PN T+ +L+
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
K+L + RV +++ M S G + Y ++ LC + ++++A +
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----T 243
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
P Y+ L+ C ++A L DE + G++
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 166/410 (40%), Gaps = 34/410 (8%)
Query: 79 PLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDE-TLSFF 137
P IS HL F +T + +N G+ L F+ T H D TL+
Sbjct: 86 PTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTL 145
Query: 138 TDYFGRRKDFKA---IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYG 194
R + K HD +V + L + + I+ L + G + +E +
Sbjct: 146 IKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLE-ERS 204
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAK 253
K D ++++ LC+N A L + A +I+P+ LI G+C+ G L EA
Sbjct: 205 IKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAV 264
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKK-------------------------DPF 288
L EM ++ ++D + K + K D +
Sbjct: 265 ALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGY 324
Query: 289 RLDSE---AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
L +E A+ V M +GV V+++ ++I LCK + ++AI LF M PN
Sbjct: 325 FLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNT 384
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
TF LI L ++ R+ +++D+M+ Y + LC ++QA+++F+K
Sbjct: 385 ITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKK 444
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M T PD TY +L+ C R+ A +F + G + + Y V
Sbjct: 445 MITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTV 494
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 7/209 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++I G C +DEA L EM T+ +N ++D + K R + L +
Sbjct: 354 IMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDK---- 409
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M +V T++ LI LCK + AI LF +M P+ T+ +LI L +
Sbjct: 410 ---MRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCK 466
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
R+ E+ + GY + + Y ++ C ++A+++ KM+ +G P++ T
Sbjct: 467 GGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAIT 526
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+D+++ + DKA L E + G+
Sbjct: 527 FDIIICALFEKDENDKAEKLLREMIARGL 555
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L ++GR V ++M RD D + +++ LC+N + A L K
Sbjct: 386 TFNSLIDGLCKSGRIAYVWDLVDKM-RDRSQLADVITYSSLIDALCKNCHLDQAIALFKK 444
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
EI PD +LI G C G+L A+ + + + G+ L Y + +S C+
Sbjct: 445 MITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVM---ISGFCK 501
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
L EA +L ME NG N TF+++I L + ++ A KL M G
Sbjct: 502 AG----LFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 9/183 (4%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
T +N IL + K+ R L +++ G+ ++ T N+LI+ C + +
Sbjct: 69 TFQFNNILSSLVKMQRFPTAISLSKH-------LDFKGITSDLVTLNILINCFCHLGQIT 121
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+ + + + G HP+ T LIK L V + + D + + + + + Y +
Sbjct: 122 LSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLI 181
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
LC I + A+ + ++ PD Y++++ C + V +A L+ E N +
Sbjct: 182 NGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSE--MNAKQ 239
Query: 448 VKP 450
+ P
Sbjct: 240 IYP 242
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 17/381 (4%)
Query: 64 ARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQ 123
A +L+ +L + + L ++ LH + TP LV + L G L F L+
Sbjct: 29 ATTLAALILNSTNSQTL--AESLH--SPSIQWTPQLVNTILKRLWNHGPKALHFFKILSH 84
Query: 124 NANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV--LGP--KTLASCIDRLVRAGRP 179
+ ++ H + D R +DF+ + FLV LGP +T A +R G+P
Sbjct: 85 HPSYCHQASSFDHAIDICARLRDFRTLW-FLVSRMRSCRLGPSPRTFAIIAERYAAMGKP 143
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL 239
+ + F M +YG +D S +++ LC++ A L K + D +++
Sbjct: 144 HRAVTVFMSMH-EYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNII 202
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ GWC+ + +A + +EM G YN +L+ + + +EA L
Sbjct: 203 VNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQT-------NEAWGFFL 255
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+M+ +V T+ +I L + + A +F +M + G P+ TF LI+ L +
Sbjct: 256 EMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKD 315
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
V + + M GY Y + LC + +++AM + E+M+ D P+ +TY+
Sbjct: 316 SVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYN 375
Query: 420 LLMTKWCAHNRVDKANALFDE 440
+L+ +C ++K LF +
Sbjct: 376 ILIRYFCDAGEIEKGLDLFQK 396
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P + ++ + + GK A + M+ G ++N ILD LC+ K
Sbjct: 125 PSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDV---LCKSKR---- 177
Query: 291 DSEAEKVLLDMEYN-------GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++M YN + ++N++++ C I+R+ A+++ M E G P
Sbjct: 178 --------VEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTP 229
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TT+ +++ ++A + E MK I Y + L + I++A +VF
Sbjct: 230 NLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVF 289
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+M DG P T++ L+ C + V+ A +F+E V+ G
Sbjct: 290 NQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRG 331
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 173/421 (41%), Gaps = 39/421 (9%)
Query: 86 LHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRK 145
L L S V L + LN +AG F W ++ + H E + K
Sbjct: 70 LALQESGVVLRNGLTERVLNRCGDAGILAYKFFVWASKQPCYRHCYENYKAMIKVLSKMK 129
Query: 146 DFKAIHDFLV----DNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
F A+ L DN ++ + + R + + + + M + YG + D+
Sbjct: 130 QFGAVWALLEEMRRDNSVLITSEVFVVVMRRFASSRMVNKAIEVLDEMPK-YGCEPDEYV 188
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+NG A L +D P K L+ GWC +GKL EAK + +M
Sbjct: 189 FGCLLDALCKNGSVKEAASLFEDMRVRFSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMRE 248
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRL----------------------------DSE 293
GFE V YN +L + + D F L E
Sbjct: 249 AGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDE 308
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A +V ++ME +G +V T+ L+S CK R + ++ M + G PN+ T+L L+
Sbjct: 309 AMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLML 368
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHN 412
+ + + E E++ M+ G I Y + RL C + + + + +M+ G +
Sbjct: 369 AHEKKEELEECKELMGEMQKIG-CIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLS 427
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKR 472
P +T+ +++ + H + +A F E V G+ + ++Y + L A+ +G+K
Sbjct: 428 PGLDTFVIMINGFLGHGYLVEACQYFKEMVERGL-LSSRQYGILKDLLN---ALLRGEKL 483
Query: 473 E 473
E
Sbjct: 484 E 484
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 13/291 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTA 226
+ ID + + + F M G D + ++ C G A L K
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMVSK-GISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRK 284
I PD ++L+ +C DGK+ E K + M + G + V YN ++D C+ K K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
A+ + M GV ++++++++I+ CKI++ ++A+ LF M P+
Sbjct: 349 ---------AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ LI L ++ R+ +++D+M G Y L LC ++++A+++
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLT 459
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
K K G PD TY +L+ C +++ A +F++ + G + Y +
Sbjct: 460 KFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTI 510
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + ++I G+C K DEA L +EM+R V Y+ ++D +SK R
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI------ 416
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
S A +++ M GVP N+ T+N ++ LCK + + AI L + + G P+ +T+ +
Sbjct: 417 -SYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSI 475
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LIK L Q+ ++ + ++ + + GY + Y + C +A+++ KM+ +G
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD++TY++++ + D A L E + G+
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 128/306 (41%), Gaps = 30/306 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
+ LV++ VL ++ME G K + + +++ C+ G +A K
Sbjct: 92 LGSLVKSKHYHTVLYLSQKMEFR-GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMG 150
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD L KG C+ G++ +A ++ GF ++Y ++ + K+ +
Sbjct: 151 YVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAAL 210
Query: 289 ----------------------------RLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L +EA + +M G+ +V T++ LIS
Sbjct: 211 DLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGF 270
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C + + +DAI LF +M P+ TF +L+ + + ++ EG + D M G
Sbjct: 271 CILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF 330
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++ + +A S+F M G NPD ++Y +++ +C + D+A LF E
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Query: 441 AVRNGV 446
R +
Sbjct: 391 MHRKNI 396
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 98/213 (46%), Gaps = 9/213 (4%)
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C++LI +C G + A + ++ + G+ T+ + + LC K + +
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTL---SKGLCLKGQIQQAFLFHD 179
Query: 296 KVL-LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
KV+ L ++ + ++ LI LCK+ + A+ L R+ PN + +I S
Sbjct: 180 KVVALGFHFDQI-----SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ + V E ++ M S G + Y ++ C + +++ A+ +F KM + PD
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
T+++L+ +C ++ + +FD ++ G++
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 36/280 (12%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
G+ K+ K + D ++ K+ + P T S +D + F M + G D
Sbjct: 309 GKMKEGKTVFDMMM--KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG-GVNPDI 365
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
S +++ C+ A L K+ + I PD LI G G++ A +L +
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 259 MYRGGFELGTVAYNCILDCVSK----------LCRKKDP-FRLD---------------- 291
M+ G YN ILD + K L + KD F+ D
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485
Query: 292 -SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A KV D+ G +V + ++I C +A+ L +M + GC P+ T+ +
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+I SL++ ++++ M + G + D Y LTRL
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGLPLNFYDLY--LTRL 583
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L+++M G + V N +++C +L PF A+ +L M Y VP + TF
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQL--GLIPFAFSVFAK--ILKMGY--VPDTI-TFT 159
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L LC + + A ++ G H ++ ++ LI L +VGE +D ++
Sbjct: 160 TLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGL---CKVGETRAALDLLQRV 216
Query: 375 GYAIGKKD---YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ + + Y + +C ++ + +A +F +M + G +PD TY L++ +C ++
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276
Query: 432 DKANALFDEAVRNGVEVKPKEYRVD 456
A LF++ + +KP Y +
Sbjct: 277 KDAIDLFNKMILE--NIKPDVYTFN 299
>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 17/317 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERME---RDYG 194
GR D ++D ++ EV + P TL I+ L ++ R + L FE+M D G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 195 --FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLD 250
K D +++ LC+ G AE+L+ E P+ + LI G+C GKL+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
AK + M + V N I V +CR + A +DME GV NV
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTI---VGGMCRHHGL----NMAVVFFMDMEKEGVKGNV 476
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI C + E A+ + +M E GC P+ + LI L Q R + ++++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+K G+++ Y + C E+ + M+ +G PDS TY+ L++ + H
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 431 VDKANALFDEAVRNGVE 447
+ + ++ +G++
Sbjct: 597 FESVERMMEQMREDGLD 613
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 121/294 (41%), Gaps = 28/294 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T+ + + + R + FF ME++ G K + + ++ C A EK
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+++ + PD KI LI G C + +A R+ ++ GGF L +AYN + +
Sbjct: 502 MLEAGCS---PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML---IGL 555
Query: 281 LCRKKDPFRLDSEAEKV---LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
C K + AEKV L DME G + T+N LIS K + E ++ +M
Sbjct: 556 FCDKNN-------AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI----GKKDYYEFLTRLCGI 393
E G P TT+ +I + VGE DE + K G Y + +
Sbjct: 609 EDGLDPTVTTYGAVIDAY---CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
QA+S+ E+MK P+ ETY+ L + + L DE V E
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCE 719
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 239 LIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+I +C G+LDEA +L ++M TV YN +++ SKL L E
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE---- 677
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M+ V NVET+N L L + + E +KL M E C PN+ T +L++
Sbjct: 678 ---MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME---- 730
Query: 358 AARVGEGDEMIDRMK-SAGYAIG 379
R+ DE++ K GY++
Sbjct: 731 --RLSGSDELVKLRKFMQGYSVA 751
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 150/360 (41%), Gaps = 12/360 (3%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA- 149
S V P L + LN +AG F W ++ + + R + F A
Sbjct: 90 SGVVVRPGLTERVLNRCGDAGNLAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAV 149
Query: 150 ---IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
I + +N ++ P+ + R A + + + M +YG + D+ ++
Sbjct: 150 WALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVQVLDEMP-NYGCEPDEYVFGCLL 208
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ L +NG A L ++ P K L+ GWC +GKL EAK + +M G E
Sbjct: 209 DALRKNGSVKEAASLFEELRYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEP 268
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V YN +L ++ + D + L L +M G N ++ VLI +LCK R
Sbjct: 269 DIVVYNNLLGGYAQADKMGDAYDL-------LKEMRRKGCEPNATSYTVLIQSLCKHERL 321
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+A ++F M GC + T+ LI + ++ G E++D M G+ + Y
Sbjct: 322 EEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHI 381
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ E +E+ + +M+ G PD Y+ ++ C V + L++E +G+
Sbjct: 382 MVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGL 441
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+ F +L+ R A+++ M +GC P+E F L+ +L + V E + +
Sbjct: 167 QVFVILMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEE 226
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
++ + K + L C ++ +A V +MK G PD Y+ L+ + ++
Sbjct: 227 LRYR-WKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADK 285
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+ A L E R G E Y V
Sbjct: 286 MGDAYDLLKEMRRKGCEPNATSYTV 310
>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
protein-like proteins; contains similarity to Pfam
family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 17/317 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERME---RDYG 194
GR D ++D ++ EV + P TL I+ L ++ R + L FE+M D G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 195 --FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLD 250
K D +++ LC+ G AE+L+ E P+ + LI G+C GKL+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
AK + M + V N I V +CR + A +DME GV NV
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTI---VGGMCRHHGL----NMAVVFFMDMEKEGVKGNV 476
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI C + E A+ + +M E GC P+ + LI L Q R + ++++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+K G+++ Y + C E+ + M+ +G PDS TY+ L++ + H
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 431 VDKANALFDEAVRNGVE 447
+ + ++ +G++
Sbjct: 597 FESVERMMEQMREDGLD 613
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 28/301 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T+ + + + R + FF ME++ G K + + ++ C A EK
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+++ + PD KI LI G C + +A R+ ++ GGF L +AYN + +
Sbjct: 502 MLEAGCS---PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML---IGL 555
Query: 281 LCRKKDPFRLDSEAEKV---LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
C K + AEKV L DME G + T+N LIS K + E ++ +M
Sbjct: 556 FCDKNN-------AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI----GKKDYYEFLTRLCGI 393
E G P TT+ +I + VGE DE + K G Y + +
Sbjct: 609 EDGLDPTVTTYGAVIDAY---CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
QA+S+ E+MK P+ ETY+ L + + L DE V + V ++
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVNQIRSQW 725
Query: 454 R 454
R
Sbjct: 726 R 726
>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 17/317 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERME---RDYG 194
GR D ++D ++ EV + P TL I+ L ++ R + L FE+M D G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 195 --FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLD 250
K D +++ LC+ G AE+L+ E P+ + LI G+C GKL+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
AK + M + V N I V +CR + A +DME GV NV
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTI---VGGMCRHHGL----NMAVVFFMDMEKEGVKGNV 476
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI C + E A+ + +M E GC P+ + LI L Q R + ++++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+K G+++ Y + C E+ + M+ +G PDS TY+ L++ + H
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 431 VDKANALFDEAVRNGVE 447
+ + ++ +G++
Sbjct: 597 FESVERMMEQMREDGLD 613
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 120/291 (41%), Gaps = 22/291 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T+ + + + R + FF ME++ G K + + ++ C A EK
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+++ + PD KI LI G C + +A R+ ++ GGF L +AYN + +
Sbjct: 502 MLEAGCS---PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML---IGL 555
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
C K + + ++L DME G + T+N LIS K + E ++ +M E G
Sbjct: 556 FCDKNNT----EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI----GKKDYYEFLTRLCGIERI 396
P TT+ +I + VGE DE + K G Y + +
Sbjct: 612 LDPTVTTYGAVIDAY---CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
QA+S+ E+MK P+ ETY+ L + + L DE V E
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCE 719
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 239 LIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+I +C G+LDEA +L ++M TV YN +++ SKL L E
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE---- 677
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M+ V NVET+N L L + + E +KL M E C PN+ T +L++
Sbjct: 678 ---MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME---- 730
Query: 358 AARVGEGDEMIDRMK-SAGYAIG 379
R+ DE++ K GY++
Sbjct: 731 --RLSGSDELVKLRKFMQGYSVA 751
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 131/268 (48%), Gaps = 9/268 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I+ L + G + + F++ME++ G K D + +++ LC++ + A + + + +
Sbjct: 198 TIINGLCKTGNTSMAVDVFKKMEQN-GCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLD 256
Query: 228 EIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
P + + ++ G+C+ G+L+EA RL +EM TV ++D LC++
Sbjct: 257 RGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD---GLCKEG- 312
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+ SEA V M GV N+ T+N L+ C R +A K+F M GC P
Sbjct: 313 ---MVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
++ +LI ++ R+ E ++ M Y + LC R ++A+++F++M
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ G P+ TY +L+ +C H +D+A
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEA 457
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 117/281 (41%), Gaps = 37/281 (13%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDE 251
+G + SL +++ LC + +A ++ K I P + LI G C +GK+ E
Sbjct: 117 FGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKE 176
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSK------------------------------- 280
A L EM R G E ++YN I++ + K
Sbjct: 177 AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIID 236
Query: 281 -LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC+ RL ++A + L +M G+P NV T+N ++ C + + +A +LF M
Sbjct: 237 SLCKD----RLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR 292
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
P+ T +L+ L + V E + + M G Y + C + +A
Sbjct: 293 DVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEA 352
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
VFE M G P +Y++L+ +C R+D+A +L E
Sbjct: 353 KKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAE 393
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 125/295 (42%), Gaps = 14/295 (4%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TAN 227
C DRLV + F M D G + + +V C G + A +L K+
Sbjct: 239 CKDRLVN-----DAMEFLSEM-LDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR 292
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
++ PD +L+ G C +G + EA+ + M G E YN ++D C +
Sbjct: 293 DVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMD---GYCLQ--- 346
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RL +EA+KV M G V ++N+LI+ CK RR ++A L M +P+ T
Sbjct: 347 -RLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVT 405
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L++ L Q R E + M S G Y L C +++A+ + + M+
Sbjct: 406 YSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
P+ + +L+ +++ A LF + +G+ + Y V + L K
Sbjct: 466 EKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ L G+ + + F M R G + + S ++ LC+ G S A + K
Sbjct: 160 TFNALINGLCNEGKIKEAVELFNEMVRR-GHEPNVISYNTIINGLCKTGNTSMAVDVFKK 218
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N PD + +I C D +++A EM G YNC++ L +
Sbjct: 219 MEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQ 278
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+EA ++ +M V + T +L+ LCK +A +F M E G P
Sbjct: 279 L-------NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEP 331
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N +T+ L+ + E ++ + M G A G Y + C R+++A S+
Sbjct: 332 NISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLL 391
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M NPD+ TY LM C R +A +F E G+
Sbjct: 392 AEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
TL +D L + G ++ FE M + G + + + +++ C + A+K+ +
Sbjct: 300 TLTILVDGLCKEGMVSEARLVFETMT-EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEI 358
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P ++LI G+C ++DEAK L EMY TV Y+ ++ + + R
Sbjct: 359 MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA + +M G+ N+ T+++L+ CK ++A+KL M E P
Sbjct: 419 PK-------EALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEP 471
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N +LI+ ++ A ++ E+ ++ + G + Y + L ++A +F
Sbjct: 472 NIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLF 531
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
KM+ DG P+S +Y++++ + + A L DE V
Sbjct: 532 RKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 570
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 124/260 (47%), Gaps = 10/260 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRL 255
D +L ++V+ LC+ G S A +LV +T E + P+ + L+ G+C+ ++EAK++
Sbjct: 297 DTVTLTILVDGLCKEGMVSEA-RLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKV 355
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
M R G G +YN + ++ C+ + R+D EA+ +L +M + + + T++
Sbjct: 356 FEIMIRQGCAPGVHSYNIL---INGFCKSR---RMD-EAKSLLAEMYHKALNPDTVTYST 408
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ LC+ R ++A+ +F M +G PN T+ +L+ + + E +++ M+
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ + + ++E A +F K+ DG P TY +++ D+A
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAY 528
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
LF + +G Y V
Sbjct: 529 DLFRKMEDDGFLPNSCSYNV 548
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ GV NV + NVLI+ LC++ + A+ + +M + G HP +TF LI L +
Sbjct: 114 MDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGK 173
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E E+ + M G+ Y + LC A+ VF+KM+ +G PD TY+
Sbjct: 174 IKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNT 233
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
++ C V+ A E + G+
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGI 259
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 9/276 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I G + L F++RM R+ G + + ++ LC A +
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIRE-GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N P+ + LI G+ G LD A + M G VAY C++D LCR
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV---LCR 433
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ ++A ++ +M+ P N TFN I LC R + AIK+F +MG GC P
Sbjct: 434 NS----MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFP 489
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TT+ L+ SL + R GE ++ M+ G + Y + C + +A+ +
Sbjct: 490 NTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELL 549
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
KM G PD+ T ++++ +C +V+ A L D
Sbjct: 550 GKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMD 585
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 14/277 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANE 228
+D L+ R + + M++D G + + + ++++ LC+N A KL V+ ++
Sbjct: 153 LDALLDENRFQMINPIYSNMKKD-GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG 211
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD+ LI C GK+ EA+ LA F YN +++ V K ++ F
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEARELAMS-----FTPSVPVYNALINGVCKEYTFEEAF 266
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L L +M G+ NV ++ +I+ L E ++ + +M GC PN TF
Sbjct: 267 QL-------LDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTF 319
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LIK + E + DRM G Y + LC + A+SVF +M+
Sbjct: 320 TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+G P+ TY L+ + +D A+ +++ + +G
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 7/216 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LIKG+ + G EA M R G VAYN ++ LC K+ +A V
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH---GLCSKRSL----GDAVSVF 374
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME NG NV T++ LI K + A +++ M GCHPN + ++ L +
Sbjct: 375 NQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRN 434
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + +I+ M+ + F+ LCG R++ A+ VF++M G P++ TY
Sbjct: 435 SMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTY 494
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ L+ R +A L + G+E+ Y
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYN 530
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 132/287 (45%), Gaps = 9/287 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T ++ ID +AG + M +G + + +V+ LC N + A L++
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWM-ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIE 445
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ E P + + + IKG C G++D A ++ +M G T YN +LD + K
Sbjct: 446 NMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R + F L + DME+ G+ N+ T+N +I C +A++L +M G
Sbjct: 506 RFGEAFGL-------VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T ++I + + +V +++DR+ + + Y ++ +C +E+A+
Sbjct: 559 PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVY 618
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
+M ++G +P+ T+++L+ ++ A D + +G E +
Sbjct: 619 LRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFETR 665
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 108/287 (37%), Gaps = 46/287 (16%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G D+ S ++ LC+ G A +L A P + + LI G C + +EA
Sbjct: 211 GCDPDEVSYTTLISSLCKLGKVKEAREL----AMSFTPSVPVYNALINGVCKEYTFEEAF 266
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+L EM G + ++Y I++ +S D ++ VL M G N+ TF
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALS------DAGNVELSL-AVLAKMFARGCSPNLHTF 319
Query: 314 NVLI-----------------------------------SNLCKIRRSEDAIKLFYRMGE 338
LI LC R DA+ +F +M
Sbjct: 320 TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
GC PN T+ LI +A + E+ + M + G Y + LC Q
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A + E M+ + P++ T++ + C RVD A +FD+ +G
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 123/311 (39%), Gaps = 38/311 (12%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A + RL T L +F+ + FK + ++++EKL + L++
Sbjct: 44 ADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMK 103
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
E I + + +I + G ++A + M + YN ILD + +
Sbjct: 104 LEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDAL----LDE 159
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ F++ + +M+ +G+ NV T+N+L+ LCK R + A KL M GC P+E
Sbjct: 160 NRFQM---INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDE 216
Query: 346 TTFLVLIKSLYQAARVGEGDE------------------------------MIDRMKSAG 375
++ LI SL + +V E E ++D M + G
Sbjct: 217 VSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + L +E +++V KM G +P+ T+ L+ + +A
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Query: 436 ALFDEAVRNGV 446
+D +R GV
Sbjct: 337 DFWDRMIREGV 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+ ++I L R + L +M G +E F+ +I S +A + + RM
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ K Y L L R + ++ MK DG P+ TY++L+ C +NRV
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
D A+ L E G + Y L K VK+ ++
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE 237
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A K M+ V V+ +N ++ L R + ++ M + G PN T+ +L+
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
K+L + RV +++ M S G + Y ++ LC + ++++A +
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----T 243
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
P Y+ L+ C ++A L DE + G++
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 24/284 (8%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-T 225
+ ID L + G L F++ME +YG + D +V LC +G A+ L++ T
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN------CILDCVS 279
+I PD + LI + +GK +A+ L EM R Y C+ CV
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
EA ++ ME G +V + LI+ CK ++ +DA+K+FY M +
Sbjct: 300 -------------EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G N T+ LI+ Q + E+ M S G + Y L LC ++++A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 400 MSVFEKMK---TDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ +FE M+ DG P+ TY++L+ C + +++KA +F++
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 129/322 (40%), Gaps = 14/322 (4%)
Query: 139 DYFGRRKDFKAIHDFLVDNKEVLG-PKTLASC---IDRLVRAGRPTQVLGFFERMERDYG 194
+ + K F + + L D+ +++G L +C ++ ++ +P F +M + G
Sbjct: 80 NVIAKMKKFDVVIN-LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK-LG 137
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAK 253
F+ D + ++ C A +V I PD + +I C +G ++ A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L +M G V Y +++ + R +D A+ +L M + +V TF
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD-------ADSLLRGMTKRKIKPDVITF 250
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LI K + DA +L+ M PN T+ LI V E +M M++
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + C ++++ AM +F +M G ++ TY L+ + + +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 434 ANALFDEAVRNGVEVKPKEYRV 455
A +F V GV + Y V
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNV 392
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 124/287 (43%), Gaps = 12/287 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID V+ G+ + M R + + ++ C G A ++
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIR-MSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ FPD LI G+C K+D+A ++ EM + G T+ Y ++ ++ +
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW---G 340
+ A++V M GVP N+ T+NVL+ LC + + A+ +F M + G
Sbjct: 368 P-------NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ VL+ L ++ + + + M+ IG Y + +C +++ A+
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++F + + G P+ TY +++ +A+ LF + +GV
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 59/134 (44%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
F L++ + K+++ + I L + G + T +L+ Q+++ + +M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G+ + + C R+E+AMS+ +M G PD Y ++ C + V+
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 433 KANALFDEAVRNGV 446
A +LFD+ G+
Sbjct: 195 YALSLFDQMENYGI 208
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 168/409 (41%), Gaps = 20/409 (4%)
Query: 50 TSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPE 109
TSNP+ + IA ++ NLEA +S L ++V + L+
Sbjct: 158 TSNPEVVGRVCAAIADVVAAGADANLEAALSALSPPL---------CEAVVLAVLHRFKH 208
Query: 110 AGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV--LGPKTLA 167
A R F W T + F+HT T G+ + F+ + + + +V L
Sbjct: 209 AHRPSYRFFRWATASGGFTHTTITYCKMLHILGKTRQFEMMVAIIQEMGKVGALSMDAFK 268
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
I AG +G FE M+++ GF +S ++ L G A ++
Sbjct: 269 VAIKSFAAAGEIKNAVGVFELMKKN-GFDDGVESFNCLLVALANEGLGREARQVFDKMHG 327
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ PD + L+ WC L EA R+ EM G + V +N +++ + + R+
Sbjct: 328 QYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRR--- 384
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
EA K+ M+ G P NV T+ +LI + CK + + A++ F M E C P+ T
Sbjct: 385 ----PEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVAT 440
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ A R+ +++ M G + Y + L + + A +++KM
Sbjct: 441 YTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMI 500
Query: 408 TDGHNPDSETYDLLMTKWCAHNR-VDKANALFDEAVRNGVEVKPKEYRV 455
G P TY+++M + +R A+++E R G+ Y V
Sbjct: 501 KKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTV 549
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 140/331 (42%), Gaps = 12/331 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR KD + + D + +V+ T I G + + M G + +
Sbjct: 273 GRVKDARQLFDEMASAPDVV---TYGILIHGHCALGELENAVKLLDEMVAG-GVEPNATV 328
Query: 202 LRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
VV LC+ G+ S A ++V+D ++ D+ + ++ G+C G L A+R EM
Sbjct: 329 YTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQ 388
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
R G V Y + ++ LCR + EAEK+L +M + + T+ VLI
Sbjct: 389 RKGLATDGVTYTTM---INGLCRAVEL----EEAEKLLQEMWARRLDVDEVTYTVLIDGY 441
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + +A ++ M + G PN T+ L L + V +E++ M + G +
Sbjct: 442 CKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNA 501
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC +EQAM M T PD TY L+ C +D+A++L E
Sbjct: 502 CTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQE 561
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+ G++ Y V V+ GKK
Sbjct: 562 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKK 592
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 132/341 (38%), Gaps = 36/341 (10%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V K +L + + G +F+ M+R G D + ++ LC
Sbjct: 352 MVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRK-GLATDGVTYTTMINGLCRAV 410
Query: 214 YASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
AEKL+++ A + D+ +LI G+C GK+ EA ++ M + G V Y
Sbjct: 411 ELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYT 470
Query: 273 CILDCVSKLCRKKD--------------PFRLDS-----------------EAEKVLLDM 301
+ D LC++ D L++ +A + + DM
Sbjct: 471 ALTD---GLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADM 527
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
+ + +V T+ LI LCK + A L M + G P T+ VL+ + RV
Sbjct: 528 DTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 587
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
G +++D M Y + + C ++ +++ M++ P+ TY++L
Sbjct: 588 EGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNIL 647
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+ C + +A DE ++ G + Y R L K
Sbjct: 648 IKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNK 688
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 122/310 (39%), Gaps = 17/310 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ + +H+ +V T + D L + G M + G + + +
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMS-NKGLELNACT 503
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC+ GY A + + D PD LI C G LD A L +EM
Sbjct: 504 YNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEML 563
Query: 261 RGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLD--MEYNGVPRNVETFNVL 316
G + V YN +++ C+S E K LLD +E N P N T+N L
Sbjct: 564 DKGIKPTIVTYNVLMNGFCMSG----------RVEGGKKLLDWMLEKNIHP-NAATYNSL 612
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ C + +++ M PNE T+ +LIK +A + E D M G+
Sbjct: 613 MKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGF 672
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + L ++ +A +F M+ +G +S+ YD + + ++ A
Sbjct: 673 RLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLA 732
Query: 437 LFDEAVRNGV 446
L DE V +
Sbjct: 733 LCDELVEASI 742
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 103/250 (41%), Gaps = 8/250 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
+ + LC+ G A +L+ + +N+ + + LI G C G L++A R +M
Sbjct: 472 LTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTAC 531
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ Y ++D LC+ D R A +L +M G+ + T+NVL++ C
Sbjct: 532 LKPDVYTYTTLID---ALCKSGDLDR----AHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 584
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R E KL M E HPN T+ L+K + E+ M+S + Y
Sbjct: 585 GRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTY 644
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C +++A+ ++M G + +Y L+ + +A LF + +
Sbjct: 645 NILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRK 704
Query: 444 NGVEVKPKEY 453
G+ + Y
Sbjct: 705 EGLTAESDVY 714
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 15/232 (6%)
Query: 220 KLVKDTANEIF---PDDKIC--DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
+L D A E+F P +C ++L+K C G++ +A++L EM V Y +
Sbjct: 241 RLPLDEAIELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMASAP---DVVTYGIL 297
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ L ++ A K+L +M GV N + +++ LC DA+++
Sbjct: 298 IHGHCALGELEN-------AVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVE 350
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M + +E + ++ + D M+ G A Y + LC
Sbjct: 351 DMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAV 410
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+E+A + ++M + D TY +L+ +C ++ +A + + V+ GV
Sbjct: 411 ELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGV 462
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
+NV ++N+L+ LC R +DA +LF M P+ T+ +LI + ++
Sbjct: 257 KNVCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKL 313
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+D M + G Y + LC I A+ V E M D Y +++ +C
Sbjct: 314 LDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCN 373
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
+ A FDE R G+ Y L + + +++ +K L E AR+
Sbjct: 374 KGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEK--LLQEMWARR 426
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 18/227 (7%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P + C+ ++ LDEA L +E+ +YN +L + R KD
Sbjct: 228 ISPSPEACNAVLSRL----PLDEAIELFQELPHKN----VCSYNILLKALCDAGRVKDAR 279
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L E +V T+ +LI C + E+A+KL M G PN T +
Sbjct: 280 QLFDEMASA----------PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVY 329
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ L + + +++ M + + Y L+ C + A F++M+
Sbjct: 330 TSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQR 389
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G D TY ++ C +++A L E ++V Y V
Sbjct: 390 KGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTV 436
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 11/230 (4%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKK 285
I PD ++L+ G+C DGK+ E K + M + G + V Y ++D C+ K K
Sbjct: 262 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK- 320
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
A+ +L M GV +++++N+LI CKI++ ++A+ LF M P+
Sbjct: 321 --------AKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L + ++ +++D M G Y L LC ++++A+++ K
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 432
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+K G P+ TY +L+ C R++ A+ +F++ + G + Y V
Sbjct: 433 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 482
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 7/213 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + ++LI G+C K+DEA L +EM+ V YN ++D + KL +
Sbjct: 335 PDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI------ 388
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
S A K++ +M GVP ++ T++ ++ LCK + + AI L ++ + G PN T+ +
Sbjct: 389 -SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTI 447
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI L + R+ + + + + GY I Y + C ++A+++ KMK +
Sbjct: 448 LIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNS 507
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
PD+ TY++++ + DKA L + R
Sbjct: 508 CIPDAVTYEIIIRSLFDKDENDKAEKLREMITR 540
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 8/260 (3%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLI 240
VL F+ + G+ + + +++ LC G A + F D++ LI
Sbjct: 110 VLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLI 169
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G C G+ A L R + + V Y+ I+D + K D F L SE
Sbjct: 170 HGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSE------- 222
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ NV T++ LIS + + +DAI LF +M P+ TF +L+ + +
Sbjct: 223 MVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 282
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ EG + M G Y + C ++ + +A S+ M G NPD ++Y++
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNI 342
Query: 421 LMTKWCAHNRVDKANALFDE 440
L+ +C +VD+A LF E
Sbjct: 343 LIDGFCKIKKVDEAMNLFKE 362
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 9/297 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I G+ + F +M + K D + ++V+ C++G + +
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILE-NIKPDVYTFNILVDGFCKDGKMKEGKTVFAM 292
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I P+ L+ G+C+ ++++AK + M + G +YN ++D K+ +
Sbjct: 293 MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKI-K 351
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K D EA + +M + + +V T+N LI LCK+ + A+KL M + G P
Sbjct: 352 KVD------EAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPP 405
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ ++ +L + +V + ++ ++K G Y + LC R+E A ++F
Sbjct: 406 DIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIF 465
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
E + G+N TY +++ +C D+A AL + N Y + R L
Sbjct: 466 EDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 79/209 (37%), Gaps = 42/209 (20%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LIKG C+ G++ +A + GF+L V Y
Sbjct: 133 LIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYG-------------------------- 166
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
LI LCK+ + A+ L R+ PN + +I + +
Sbjct: 167 ----------------TLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKD 210
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
V + ++ M S G + Y ++ + +++ A+ +F KM + PD T+
Sbjct: 211 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTF 270
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++L+ +C ++ + +F ++ G++
Sbjct: 271 NILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 46/109 (42%)
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G HPN TF LIK L ++ + D + + G+ + + Y + LC +
Sbjct: 121 MGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRA 180
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
A+ + ++ + P+ Y ++ C V+ A L+ E V G+
Sbjct: 181 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGIS 229
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 19/371 (5%)
Query: 81 PISQRLHLIFSHVTPTPS--LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFT 138
P S L + + P+ S V TL +A L F W+ + F+H +++
Sbjct: 77 PWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKA-LHFFRWV-EAKGFTHNEQSYFLMI 134
Query: 139 DYFGRRKDFKAIHDFL--VDNKE----VLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
+ GR ++ A +F+ ++ K LG + S I AG + + F+ M ++
Sbjct: 135 EILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTM-KE 193
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLD 250
G + ++ + + G S A++L + + + PD ++LI+G+C++ +D
Sbjct: 194 IGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVD 253
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
E +EM R + V YN ++D LCR ++ K ++ N P NV
Sbjct: 254 EGFWFFKEMSRFKCDPDVVTYNTLVD---GLCRA-GKVKIAHNVVKGMVKKSPNLSP-NV 308
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI C + +A+ L M G PN+ T+ LI+ L +A ++ + E+++
Sbjct: 309 VTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEG 368
Query: 371 MKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M G I L + C + ++E+A SVFEKM PDS TY +L+ C
Sbjct: 369 MVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRG 428
Query: 430 RVDKANALFDE 440
+A FDE
Sbjct: 429 DFRRAEEFFDE 439
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 15/280 (5%)
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE----NGYASYAEKLVKDTAN 227
+L+R P + L FF +E GF ++ S L++E L N ++ + K +
Sbjct: 103 QLIRT--PAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGG 159
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ D+ + LI+ + G E+ ++ + M G V +N +L V K R
Sbjct: 160 AVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMA 219
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+L E ++ GV + TFN+LI C ++ F M + C P+ T
Sbjct: 220 KQLFDEM------LDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVT 273
Query: 348 FLVLIKSLYQAARVGEGDEMIDRM--KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ L+ L +A +V ++ M KS + Y + C + + +A+S+ +
Sbjct: 274 YNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAE 333
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M + G P+ TY+ L+ C ++DK + + V +G
Sbjct: 334 MVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG 373
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 27/270 (10%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTA 226
C++ +V G FF+ M R FK D D + +V+ LC G A +VK
Sbjct: 247 CMNSMVDEG-----FWFFKEMSR---FKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMV 298
Query: 227 NE---IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI+G+C+ + EA L EM G + + YN + + LC
Sbjct: 299 KKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTL---IQGLCE 355
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ ++ E ++ D G + T N LI C + + E+A +F +M E P
Sbjct: 356 AQKLDKIKEILEGMVGD---GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQP 412
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG---YAIGKK----DYYEFLTRLCGIERI 396
+ T+ VL++SL Q +E D + + +G K Y LC +
Sbjct: 413 DSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKT 472
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++A VF ++ G D +Y L+ C
Sbjct: 473 KKAERVFRQLMKRG-TQDPPSYKTLILGHC 501
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 108/266 (40%), Gaps = 17/266 (6%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDE 251
G K +K + +++ LCE +++++ + PD + LIK C GKL+E
Sbjct: 338 GLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEE 397
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR-----LDSEAEKVLLDMEYNGV 306
A + +M + + Y+ + V LC++ D FR D AEK +L +
Sbjct: 398 AFSVFEKMSELRVQPDSATYSVL---VRSLCQRGD-FRRAEEFFDELAEKEILLHDVGCK 453
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P V +N + LC +++ A ++F ++ + G + ++ LI + G +
Sbjct: 454 PL-VAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFD 511
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD----LLM 422
++ M + + Y + L A EKM H P + + L+
Sbjct: 512 LLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALV 571
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEV 448
K CAH + + +R +++
Sbjct: 572 EKGCAHESASLVKLMLERRIRQNIDL 597
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI + +++IK+F M E G P+ TF L+ + + R ++ D M
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 373 SAGYAIGKKDY-YEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
Y + Y + L R C +++ F++M +PD TY+ L+ C +
Sbjct: 228 DT-YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286
Query: 431 VDKANALFDEAVRNGVEVKP 450
V A+ + V+ + P
Sbjct: 287 VKIAHNVVKGMVKKSPNLSP 306
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 171/392 (43%), Gaps = 20/392 (5%)
Query: 59 PDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFN 118
PD ++ L ++L++ AD +S LH H+ ++ L + L F
Sbjct: 76 PDVYASQVL--KVLKSTSADNTDLSGALHQFAVHMDE--DIILMVLQKQRSNWQVALAFF 131
Query: 119 HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE-----VLGPKTLASCIDRL 173
+W ++H + D GR K + + + E V+ K A ++R
Sbjct: 132 NWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAVLLNRY 191
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD 233
A + + + F + +DYGF+ D ++++ LC + AE L ++ +E
Sbjct: 192 AGAHKVQEAIEVF-YLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVT 250
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
K ++++ GWCV G L +A+R+ ++ E + ++ ++K R S
Sbjct: 251 KSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRI-------SA 303
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A K+ M G+ +V N +I LC ++ +A+++F M + C + T+ LIK
Sbjct: 304 AVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIK 363
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ + R+ + E++D M++ G + Y L E+ + +++ ++M+ G
Sbjct: 364 YMCKIKRMEKVYELLDDMEAKGCPPNNRTYSYILK---TTEKPKDVIALMQRMERTGCKL 420
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
DS+ Y+L++ + ++DE R G
Sbjct: 421 DSDIYNLILNLYIKWKYEKGMQQIWDEMERRG 452
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 119/268 (44%), Gaps = 8/268 (2%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV LC+ G S A +V+D + ++ D+ + ++ G+C G L A+R EM R G
Sbjct: 335 VVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKG 394
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
V Y + ++ LCR + EAEKVL +M + + T+ VL+ CK
Sbjct: 395 LATDGVTYTTL---INGLCRAGEL----KEAEKVLQEMLARRLDVDEVTYTVLVDGYCKR 447
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A ++ M + G PN T+ L L + V +E++ M + G + Y
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTY 507
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC ++QAM M G PD TY L+ C +D+A+ L E +
Sbjct: 508 NSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLD 567
Query: 444 NGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
NG++ Y V V+ GKK
Sbjct: 568 NGIKPTIVTYNVLMNGFCMSGRVEGGKK 595
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 144/346 (41%), Gaps = 12/346 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + + +V +K +L + + G +F+ M+R G D +
Sbjct: 343 GRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK-GLATDGVT 401
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC G AEK++++ A + D+ +L+ G+C GK+ EA ++ M
Sbjct: 402 YTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMV 461
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ G V Y + D LC++ D A ++L +M G+ N T+N LI+ L
Sbjct: 462 QRGVAPNVVTYTALSD---GLCKQGDV----QAANELLHEMSNKGLELNACTYNSLINGL 514
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + A++ M G P+ T+ LI +L ++ + +++ M G
Sbjct: 515 CKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTI 574
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C R+E + E M +P++ TY+ LM ++C N + ++
Sbjct: 575 VTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKG 634
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRL 486
VE Y + +K + K+ + +M K RL
Sbjct: 635 MCSRNVEPNENTYNI---LIKGHCKARSMKEAQYFHNEMIEKGFRL 677
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 14/313 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ + +H+ +V T + D L + G M + G + + +
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMS-NKGLELNACT 506
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC+ GY A + + D A + PD LI C G+LD A L +EM
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566
Query: 261 RGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
G + V YN +++ C+S R++ +K+L M + N T+N L+
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSG--------RVEG-GKKLLEWMLEKNIHPNATTYNSLMK 617
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + +++ M PNE T+ +LIK +A + E + M G+ +
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRL 677
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + L ++ +A +F M+ +G + + Y+ + + ++ AL
Sbjct: 678 TASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALC 737
Query: 439 DEAVRNGVEVKPK 451
DE V + VK K
Sbjct: 738 DELVEASI-VKSK 749
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 8/248 (3%)
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LC+ G A +L+ + +N+ + + LI G C G LD+A R +M G +
Sbjct: 477 DGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLK 536
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
Y ++D LC+ + R A +L +M NG+ + T+NVL++ C R
Sbjct: 537 PDVYTYTTLID---ALCKSGELDR----AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGR 589
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
E KL M E HPN TT+ L+K + E+ M S + Y
Sbjct: 590 VEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNI 649
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ C +++A +M G + +Y L+ + +A LF + + G
Sbjct: 650 LIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709
Query: 446 VEVKPKEY 453
+P Y
Sbjct: 710 FTAEPDVY 717
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 220 KLVKDTANEIF---PDDKIC--DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
+L D A E+F PD +C ++L+K C G++++A++L EM V Y +
Sbjct: 244 RLPLDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGIL 300
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ L ++ A K+L DM GV N + +++ LC R DA+ +
Sbjct: 301 IHGYCALGELEN-------AVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVE 353
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M +E + ++ + D M+ G A Y + LC
Sbjct: 354 DMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAG 413
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+++A V ++M + D TY +L+ +C ++ +A + + V+ GV
Sbjct: 414 ELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGV 465
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 18/227 (7%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P + C+ ++ LDEA E+++G + +YN +L + R +D
Sbjct: 231 ISPSPEACNAVLSRL----PLDEAI----ELFQGLPDKNVCSYNILLKVLCGAGRVEDAR 282
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L E P +V T+ +LI C + E+A+KL M G PN T +
Sbjct: 283 QLFDEMAS----------PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVY 332
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ L RV + +++ M + + Y L+ C + A F++M+
Sbjct: 333 TSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQR 392
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G D TY L+ C + +A + E + ++V Y V
Sbjct: 393 KGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 19/371 (5%)
Query: 81 PISQRLHLIFSHVTPTPS--LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFT 138
P S L + + P+ S V TL +A L F W+ + F+H +++
Sbjct: 77 PWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKA-LHFFRWV-EAKGFTHNEQSYFLMI 134
Query: 139 DYFGRRKDFKAIHDFL--VDNKE----VLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
+ GR ++ A +F+ ++ K LG + S I AG + + F+ M ++
Sbjct: 135 EILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTM-KE 193
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLD 250
G + ++ + + G S A++L + + + PD ++LI+G+C++ +D
Sbjct: 194 IGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVD 253
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
E +EM R + V YN ++D LCR ++ K ++ N P NV
Sbjct: 254 EGFWFFKEMSRFKCDPDVVTYNTLVD---GLCRA-GKVKIAHNVVKGMVKKSPNLSP-NV 308
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI C + +A+ L M G PN+ T+ LI+ L +A ++ + E+++
Sbjct: 309 VTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEG 368
Query: 371 MKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M G I L + C + ++E+A SVFEKM PDS TY +L+ C
Sbjct: 369 MVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRG 428
Query: 430 RVDKANALFDE 440
+A FDE
Sbjct: 429 DFRRAEEFFDE 439
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 15/280 (5%)
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE----NGYASYAEKLVKDTAN 227
+L+R P + L FF +E GF ++ S L++E L N ++ + K +
Sbjct: 103 QLIRT--PAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGG 159
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ D+ + LI+ + G E+ ++ + M G V +N +L V K R
Sbjct: 160 AVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMA 219
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+L E ++ GV + TFN+LI C ++ F M + C P+ T
Sbjct: 220 KQLFDEM------LDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVT 273
Query: 348 FLVLIKSLYQAARVGEGDEMIDRM--KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ L+ L +A +V ++ M KS + Y + C + + +A+S+ +
Sbjct: 274 YNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAE 333
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M + G P+ TY+ L+ C ++DK + + V +G
Sbjct: 334 MVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG 373
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 27/270 (10%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTA 226
C++ +V G FF+ M R FK D D + +V+ LC G A +VK
Sbjct: 247 CMNSMVDEG-----FWFFKEMSR---FKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMV 298
Query: 227 NE---IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI+G+C+ + EA L EM G + + YN + + LC
Sbjct: 299 KKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTL---IQGLCE 355
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ ++ E ++ D G + T N LI C + + E+A +F +M E P
Sbjct: 356 AQKLDKIKEILEGMVGD---GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQP 412
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG---YAIGKK----DYYEFLTRLCGIERI 396
+ T+ VL++SL Q +E D + + +G K Y LC +
Sbjct: 413 DSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKT 472
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++A VF ++ G D +Y L+ C
Sbjct: 473 KKAERVFRQLMKRG-TQDPPSYKTLILGHC 501
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 110/273 (40%), Gaps = 17/273 (6%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDE 251
G K +K + +++ LCE +++++ + PD + LIK C GKL+E
Sbjct: 338 GLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEE 397
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR-----LDSEAEKVLLDMEYNGV 306
A + +M + + Y+ + V LC++ D FR D AEK +L +
Sbjct: 398 AFSVFEKMSELRVQPDSATYSVL---VRSLCQRGD-FRRAEEFFDELAEKEILLHDVGCK 453
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P V +N + LC +++ A ++F ++ + G + ++ LI + G +
Sbjct: 454 PL-VAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFD 511
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD----LLM 422
++ M + + Y + L A EKM H P + + L+
Sbjct: 512 LLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALV 571
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
K CAH + + +R +++ R+
Sbjct: 572 EKGCAHESASLVKLMLERRIRQNIDLSTHTVRL 604
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI + +++IK+F M E G P+ TF L+ + + R ++ D M
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 373 SAGYAIGKKDY-YEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
Y + Y + L R C +++ F++M +PD TY+ L+ C +
Sbjct: 228 DT-YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286
Query: 431 VDKANALFDEAVRNGVEVKP 450
V A+ + V+ + P
Sbjct: 287 VKIAHNVVKGMVKKSPNLSP 306
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 10/261 (3%)
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVD 246
E + D G K + + E LC NG AE++ + D LI G C +
Sbjct: 444 EILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCRE 503
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G + L M R F Y ++D L +K DP EK+L + + +
Sbjct: 504 GTPEAGFDLLVLMLRRDFVPDAETYGLMID---GLLKKGDPVLAHKSLEKML---KSSHL 557
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P F+ +++ L + + ++ L M E N ++ LY++ +
Sbjct: 558 P-TTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFM 616
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
I + GY + ++ F LC ++ +A + + D + +++ C
Sbjct: 617 TIGLLYENGYLVKMEELVSF---LCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLC 673
Query: 427 AHNRVDKANALFDEAVRNGVE 447
++V +A AL+ E V G++
Sbjct: 674 KAHKVSEAFALYYELVEKGMQ 694
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 9/306 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D +V+ K T+ + I+ L GR T+ L +RM + YG + ++ +
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVK-YGCEANEIT 211
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLAREMY 260
V+ ++C++G + A L + + ++I C DG LD+A L EM
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEME 271
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G + VAY+ I + LC + R D A K+L +M + NV TF+ LI
Sbjct: 272 MKGIKADVVAYSSI---IGGLC---NDGRWDDGA-KMLREMIGRNIIPNVVTFSALIDVF 324
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K + +A +L+ M G P+ T+ LI + R+GE ++M+D M S G
Sbjct: 325 VKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNI 384
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C +R++ M +F ++ + G D+ TY+ L+ +C +++ A LF E
Sbjct: 385 VTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444
Query: 441 AVRNGV 446
V GV
Sbjct: 445 MVSRGV 450
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 131/319 (41%), Gaps = 32/319 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID L + G L F ME G K D + ++ LC +G K++++
Sbjct: 251 IDSLCKDGNLDDALSLFNEMEMK-GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--C--------- 277
I P+ LI + +GKL EAK L EM G T+ Y+ ++D C
Sbjct: 310 IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEAN 369
Query: 278 ------VSKLCRKK------------DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
VSK C R+D+ ++ ++ G+ + T+N L+
Sbjct: 370 QMLDLMVSKGCEPNIVTYSILINSYCKAKRVDN-GMRLFCEISSKGLVADTVTYNTLVQG 428
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C+ + A +LF M G P+ T+ +L+ L + + E+ ++M+ + +G
Sbjct: 429 FCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILG 488
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + +C +++ A S+F + G PD TY++++ C + +A+ LF
Sbjct: 489 IGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFR 548
Query: 440 EAVRNGVEVKPKEYRVDPR 458
+ +G Y + R
Sbjct: 549 KMKEDGCAPSDCTYNILIR 567
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D + +V+ C++G + A++L ++ + P + +L+ G C +G+L +A
Sbjct: 414 GLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKA 473
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ +M + LG YN I+ + + D + L + GV +V T
Sbjct: 474 LEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSL-------FCSLSVKGVKPDVLT 526
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NV+I LCK +A LF +M E GC P++ T+ +LI++ + V E+I+ MK
Sbjct: 527 YNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMK 586
Query: 373 SAGYA 377
G+A
Sbjct: 587 MRGFA 591
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L++G+C GKL+ AK L +EM G V Y +LD LC + +A ++
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLD---GLCDNGEL----QKALEIF 477
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ + + + +N++I +C + +DA LF + G P+ T+ V+I L +
Sbjct: 478 EKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E D + +MK G A Y + G + ++ + E+MK G D+ T
Sbjct: 538 GSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTI 597
Query: 419 DLLMTKWCAHNRVDK 433
+++ + R+DK
Sbjct: 598 KMVVVML-SDGRLDK 611
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 80/201 (39%), Gaps = 13/201 (6%)
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKD---PFRLDSEAEKVLLDMEYNGVPRNVET 312
+EM G E N +++C CRK+ F + A K G N T
Sbjct: 92 CKEMDLNGIEHNMYTMNIMINC---FCRKRKLLFAFSVVGRALKF-------GFEPNTIT 141
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
F+ LI+ C R +A+ L RM E PN T LI L RV E +IDRM
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G + Y L R+C A+ +F KM+ Y +++ C +D
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A +LF+E G++ Y
Sbjct: 262 DALSLFNEMEMKGIKADVVAY 282
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%)
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+M+ NG+ N+ T N++I+ C+ R+ A + R ++G PN TF LI
Sbjct: 94 EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEG 153
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
RV E ++DRM Y + LC R+ +A+ + ++M G + TY
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ + C A LF + ++ +Y +
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSI 249
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/499 (21%), Positives = 198/499 (39%), Gaps = 34/499 (6%)
Query: 1 MPPSTSLLLGRLLLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTS-------NP 53
+PP + ++G LL P F+ +L+ L+ + +S NP
Sbjct: 104 LPPRSRYVMGSPLLATPA----CGAYDVLWGFAAGRFLSILAASDEDQGSSEQEAAASNP 159
Query: 54 KTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRA 113
+ +D IA ++ NLEA +S L ++V + L+ A R
Sbjct: 160 EGVDRVCAAIADVVASGADANLEAALSALSPPL---------CEAVVLAVLHRFKHAHRP 210
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKTLASCID 171
F W T + F+HT T G+ + F+++ + + L I
Sbjct: 211 SYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGALSMDAFKVAIK 270
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
AG +G FE M ++ GF +S ++ L + G A ++ + P
Sbjct: 271 SFAAAGEIKNAVGVFELMRKN-GFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSP 329
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + L+ WC L EA R+ EM G + V +N +++ + + R+
Sbjct: 330 DLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRR------- 382
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA K+ M+ G P NV T+ +LI + CK + + A++ F M E C P+ T+ L
Sbjct: 383 PEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCL 442
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ A ++ +++ M G + Y + L + A +++KM G
Sbjct: 443 LVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGL 502
Query: 412 NPDSETYDLLMTKW-CAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
P TY+++M + + A+++E + G+ Y V ++ + I + +
Sbjct: 503 EPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTV---FINRHIRHGRPE 559
Query: 471 KRETLPEKMARKRRRLKQI 489
+ E+M K + QI
Sbjct: 560 EAYKYIEEMINKGMKAPQI 578
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 151/315 (47%), Gaps = 12/315 (3%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASC 169
++ L W ++NF H+ ++ D GR K + + L + ++ ++ T+A
Sbjct: 101 KSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEMRQESLITLNTIAKV 160
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ R V A + + F+ ++ G +++ +S+ ++++ LC+ + A ++ + + I
Sbjct: 161 MRRFVGARQWKDAVRIFDDLQF-LGLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYI 219
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P+ ++LI GWC +++EA +EM G ++Y+ I+ C C++++ R
Sbjct: 220 APNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC---YCQEQNFDR 276
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ +L +M+ NV T+ ++ L K + E+A+++ RM GC P+ F
Sbjct: 277 V----YDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFN 332
Query: 350 VLIKSLYQAARVGEGDEMID-RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI +L +A R+ + + M A A Y ++ C + E+A + ++M+
Sbjct: 333 SLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Query: 409 DG-HNPDSETYDLLM 422
G PD +TY L+
Sbjct: 393 SGLCKPDIQTYHPLI 407
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 137/325 (42%), Gaps = 16/325 (4%)
Query: 126 NFSHTDET------LSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRP 179
+F H ++T + T G+ I L+ ++ V G + I+RL+ +
Sbjct: 39 DFWHKEQTQDLTRSVDILTTKIGKGNSEDDILQSLISDEGVNGIHLSENLINRLLFRYKD 98
Query: 180 --TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICD 237
L F FK + S ++V+ L +++++ E
Sbjct: 99 DWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEMRQESLITLNTIA 158
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+++ + + +A R+ ++ G E T + N +LD LC++K +A ++
Sbjct: 159 KVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLD---TLCKEK----FVEQAREI 211
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L++++ P N TFN+LI C IRR E+A M +GC P ++ +I+ Q
Sbjct: 212 YLELKHYIAP-NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQ 270
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+++D M++ + Y + L E+ E+A+ V E+M G PD+
Sbjct: 271 EQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLF 330
Query: 418 YDLLMTKWCAHNRVDKANALFDEAV 442
++ L+ R+D A +F A+
Sbjct: 331 FNSLIYTLGRAGRIDDATHVFKVAM 355
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 16/315 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERME--RDYGF 195
GR ++FK ++ L + KE+ + P T I+ L + R + L FE+M GF
Sbjct: 315 LGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGF 374
Query: 196 KRDKDSL--RLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDE 251
+ D + +++ LC+ G LV+ ++ P+ + LI G+C ++
Sbjct: 375 LVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEA 434
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A+ L +M + G V N ++D + K R +E M+ G+ N
Sbjct: 435 ARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNE-------MQGKGLKGNAV 487
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+ LI C + E A++LF M E GC P+ + LI L QA ++ ++ +M
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM 547
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
K AG++ + + C ++++A + ++M+ G PD TY+ L++ +
Sbjct: 548 KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDF 607
Query: 432 DKANALFDEAVRNGV 446
A+ L + V+ G+
Sbjct: 608 STAHRLMKKMVKEGL 622
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRL 173
++ F + F DE L F G + FLV+ +V+ TL ID L
Sbjct: 340 VVTFGILINHLCKFRRVDEALEVFEKMNGGESN-----GFLVE-PDVITYNTL---IDGL 390
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD 233
+ GR + LG ERM + + +++ C+ A +L + P +
Sbjct: 391 CKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPN 450
Query: 234 KIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ + L+ G C G+++ A EM G + V Y ++ + + L
Sbjct: 451 VVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFD 510
Query: 293 E----------------------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
E A VL M+ G ++ +FNVLI+ C+
Sbjct: 511 EMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKN 570
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ ++A ++ M G P+ T+ LI + ++ +M G Y
Sbjct: 571 KLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYG 630
Query: 385 EFLTRLCGIERIEQAMSVFEKM-KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C +++AM +F M T P++ Y++L+ C N+VD A +L D+
Sbjct: 631 ALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKV 690
Query: 444 NGVE 447
GV+
Sbjct: 691 KGVK 694
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I L +AG+ + +M ++ GF D S +++ C A +++K+ N
Sbjct: 526 TLISGLSQAGKLDRASFVLSKM-KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMEN 584
Query: 228 E-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
I PD + LI + G A RL ++M + G V Y + + C +
Sbjct: 585 AGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGAL---IHAYCLNGN 641
Query: 287 PFRLDSEAEKVLLDMEYNG-VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
LD EA K+ DM VP N +N+LI++LC+ + + A+ L M G PN
Sbjct: 642 ---LD-EAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNT 697
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRM 371
TF + K L + + + E++DRM
Sbjct: 698 NTFNAMFKGLQEKNWLSKAFELMDRM 723
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 13/196 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ R + + + ME + G K D + ++ + G S A +L+K E
Sbjct: 563 INGFCRKNKLDEAYEMLKEME-NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG-FELGTVAYNCILDCVSKLCRKKDP 287
+ P LI +C++G LDEA ++ R+M TV YN + ++ LCRK
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNIL---INSLCRKN-- 676
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
++D A ++ DM+ GV N TFN + L + A +L RM E C+P+ T
Sbjct: 677 -QVDL-ALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYIT 734
Query: 348 FLVLIKSLYQAARVGE 363
+L + L + VGE
Sbjct: 735 MEILTEWL---SAVGE 747
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 307 PRNVETFNVLISNLCK---IRRS---EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
P N T +++ S L K + R+ E+ + L + E PN LI L ++ R
Sbjct: 226 PPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGR 285
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+++ + G + LT L ++ ++ +MK P+ T+ +
Sbjct: 286 TDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGI 345
Query: 421 LMTKWCAHNRVDKANALFDE---AVRNGVEVKP 450
L+ C RVD+A +F++ NG V+P
Sbjct: 346 LINHLCKFRRVDEALEVFEKMNGGESNGFLVEP 378
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 172/418 (41%), Gaps = 16/418 (3%)
Query: 41 LSKPFS-SKPTSNPKT-IDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPS 98
+SKPF+ + P KT D L G ++ L + L L + T
Sbjct: 77 ISKPFTENSPKEQLKTRAVDGFLSPGEKLRGVFIQRLRGKA---AIELALTNVGIDLTID 133
Query: 99 LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD-N 157
+V N G A++ F +W + +T + GRRK + L D +
Sbjct: 134 IVSEVXNRGNLGGEAMVXFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFXVXVLKDMH 193
Query: 158 KEVLGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
+ + P +TL+ +D ++A + ++ + F +E ++G K D +SL ++++ LC+ +
Sbjct: 194 IQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLE-EFGGKCDTESLNVLLQCLCQRSHV 252
Query: 216 SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A I + +++I GW GK+ E +R + M GF + ++ ++
Sbjct: 253 GAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLI 312
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ + + R D A +V ME G N +N LISN R ++ +K +
Sbjct: 313 EGLGRAGRIDD-------AVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNF 365
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M C PN T+ LI + +A +V + EM+D M G F+ LC
Sbjct: 366 MVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGP 425
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
AM +++K + G Y LL+ + + L+DE +G + Y
Sbjct: 426 PHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVY 483
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 147/324 (45%), Gaps = 13/324 (4%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVD-NKEVLGP--KTLASCIDRLVRAGRPTQVLGFFERM 189
T + D + + F +V+ ++ + P +T I RLV AG Q + F+ M
Sbjct: 142 TYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDDM 201
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKL 249
E ++ +++ LC+ GY ++ + P+ K+ +LI GWC G++
Sbjct: 202 ESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGRI 261
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF------RLDSEAEKVLLDMEY 303
D A+R +E G E V YN +L+ + CR+ R + AE + +M
Sbjct: 262 DMAERFLKETGERGIEATVVTYNVLLNGI---CRRASLHPESRFERTITLAENLFDEMRE 318
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ +V +F++++ + + E + M E G P+ T+ ++K L R+ +
Sbjct: 319 RGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIED 378
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP-DSETYDLLM 422
+E++ M G + Y F G + E A+ +++KM+ DG +Y++L+
Sbjct: 379 AEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILL 438
Query: 423 TKWCAHNRVDKANALFDEAVRNGV 446
+ NR+D N ++++ +G+
Sbjct: 439 RMFMMLNRLDIVNEIWEDLKSSGL 462
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 2/145 (1%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N++I L K+R+ + +L M + P TF VLI+ L A + D M
Sbjct: 142 TYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDDM 201
Query: 372 KS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+S + + + L LC ++ + +F K K +P+ + Y +L+ WC R
Sbjct: 202 ESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRK-HRFSPNVKMYTVLIYGWCKIGR 260
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+D A E G+E Y V
Sbjct: 261 IDMAERFLKETGERGIEATVVTYNV 285
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 16/168 (9%)
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M G V Y ++ C+ R +D AE++L +M NGV R T+N
Sbjct: 351 MKEKGICPSVVTYTSVVKCLCSCGRIED-------AEELLGEMVRNGVSRTAVTYNCFFK 403
Query: 319 NLCKIRRSEDAIKLFYRM-----GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+ +E A+KL+ +M G G H ++ +L++ R+ +E+ + +KS
Sbjct: 404 EYMGRKDAESALKLYKKMREDGLGSLGLH----SYNILLRMFMMLNRLDIVNEIWEDLKS 459
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+G Y + LC E+ +A F +M G P T++ L
Sbjct: 460 SGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETL 507
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 29/149 (19%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL-------DCVSKL-----CRKKD 286
++K C G++++A+ L EM R G V YNC D S L R+
Sbjct: 366 VVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDG 425
Query: 287 PFRLDSEAEKVLL-----------------DMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
L + +LL D++ +G+ +++++ +LI LC+ + +A
Sbjct: 426 LGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREA 485
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
K F M E G P + TF L K L Q+
Sbjct: 486 CKFFVEMIEKGLLPQKVTFETLYKGLIQS 514
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 19/326 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D +V++ T + +D + + G L +ME K +
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVI 251
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ L ++G S A L + + IFPD + +I G+C G+ EA+RL +EM
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V Y+ +++ K ++ F EAE++ +M G+ N T+N +I
Sbjct: 312 ERKINPNVVTYSALINAYVK---ERKFF----EAEELYDEMLPRGIIPNTITYNSMIDGF 364
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY M GC P+ TF LI A R+ +G E++ M G
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADT 424
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD- 439
Y + C + + A+ + ++M + G PD T + L+ C + ++ A +F
Sbjct: 425 TTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 484
Query: 440 --------EAVR--NGVEVKPKEYRV 455
+A R NGVE + Y +
Sbjct: 485 MQKSKMDLDASRPFNGVEPDVQTYNI 510
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 8/319 (2%)
Query: 135 SFFTDYFGRRKDFKA--IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
+ Y RK F+A ++D ++ + T S ID + R F M
Sbjct: 324 ALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK 383
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDE 251
G D + +++ C +L+ + T + D + LI G+C+ G L+
Sbjct: 384 -GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNA 442
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME----YNGVP 307
A L+++M G V N +LD + + KD + +K +D++ +NGV
Sbjct: 443 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVE 502
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
+V+T+N+LIS L + +A +L+ M G PN T+ +I L + +R+ E +M
Sbjct: 503 PDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQM 562
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
D M S ++ + ++ C R++ + +F +M G D+ TY L+ +
Sbjct: 563 FDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRK 622
Query: 428 HNRVDKANALFDEAVRNGV 446
++ A +F E + +GV
Sbjct: 623 VGNINGALDIFQEMISSGV 641
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 108/289 (37%), Gaps = 32/289 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF+ D + ++ LC S A L P+ L+ G C +G++ EA
Sbjct: 142 GFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR---PNVVTFTTLMNGLCREGRVVEAV 198
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL----------------------- 290
L M G + + Y I+D + K+ L
Sbjct: 199 ALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDG 258
Query: 291 ------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
S+A + +M+ G+ ++ T+N +I C R +A +L M E +PN
Sbjct: 259 LWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPN 318
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ LI + + + E +E+ D M G Y + C R++ A +F
Sbjct: 319 VVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFY 378
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
M T G +PD T++ L+ +C R+D L E G+ Y
Sbjct: 379 VMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTY 427
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 19/259 (7%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
G D + ++ C G + A L + ++ + PD C+ L+ G C +GKL +A
Sbjct: 419 GLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 478
Query: 253 KRLAREMYRG-----------GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
+ + M + G E YN + +S L + EAE++ +M
Sbjct: 479 LEMFKAMQKSKMDLDASRPFNGVEPDVQTYNIL---ISGLINEGKFL----EAEELYKEM 531
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
+ G+ N T++ +I+ LCK R ++A ++F MG P+ TF L+ +A RV
Sbjct: 532 PHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRV 591
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+G E+ M G Y + + I A+ +F++M + G PD+ T +
Sbjct: 592 DDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSM 651
Query: 422 MTKWCAHNRVDKANALFDE 440
+T + + +A A+ ++
Sbjct: 652 LTVLWSKEELKRAVAMLED 670
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 19/226 (8%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA------------NEIFPDDKICDLLIK 241
G D + +++ LC+NG A ++ K N + PD + ++LI
Sbjct: 454 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILIS 513
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G +GK EA+ L +EM G T+ Y+ + ++ LC++ RLD EA ++ M
Sbjct: 514 GLINEGKFLEAEELYKEMPHRGIVPNTITYSSM---INGLCKQS---RLD-EATQMFDSM 566
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
+V TFN L+S CK R +D ++LF MG G + T++ LI + +
Sbjct: 567 GSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNI 626
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++ M S+G LT L E +++A+++ E ++
Sbjct: 627 NGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME +P +V +FN+LI C + A+ F ++ + G P+ TF L+ L R
Sbjct: 103 MERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDR 162
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E ++ +M + + LC R+ +A+++ ++M DG P+ TY
Sbjct: 163 VSEALDLFHQMCRPNVVT----FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 218
Query: 421 LMTKWC 426
++ C
Sbjct: 219 IVDGMC 224
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 177/427 (41%), Gaps = 20/427 (4%)
Query: 23 SPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGEL-LENLEADPLP 81
S S +FS+ T L S+ S ++ Q I + +G+L + +E+ P+
Sbjct: 38 SSVSHHFSKLKATRSRKRLENRVSAVSKSEASGLNGRLQQIVSTPNGDLNVIGMESSPIG 97
Query: 82 ISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYF 141
++ F L + N E G L F + + S +
Sbjct: 98 VNGSRS--FEEFASNIHLRKLVRNGELEEG---LKFLERMIYQGDIPDVIACTSLIRGFC 152
Query: 142 --GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
G+ K I + L ++ V T I ++G + L ERM D
Sbjct: 153 RSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS----VAPDV 208
Query: 200 DSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ ++ LC++G A E L + E +PD +LI+ C D + +A +L E
Sbjct: 209 VTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDE 268
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M + G + V YN +++ + K RLD EA K L +M G NV T N+++
Sbjct: 269 MRKKGCKPDVVTYNVLINGICK------EGRLD-EAIKFLNNMPSYGCKPNVITHNIILR 321
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
++C R DA +L M GC P+ TF +LI L + +G +++++M G
Sbjct: 322 SMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP 381
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y L C +++++A+ E M + G PD TY+ L+T C +VD A +
Sbjct: 382 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEIL 441
Query: 439 DEAVRNG 445
++ G
Sbjct: 442 NQLSSKG 448
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + +++E C + A KL+ + + PD ++LI G C +G+LDEA +
Sbjct: 242 DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL 301
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M G + + +N IL + R D AE++L DM G +V TFN+L
Sbjct: 302 NNMPSYGCKPNVITHNIILRSMCSTGRWMD-------AERLLSDMLRKGCSPSVVTFNIL 354
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LC+ R AI + +M + GC PN ++ L+ Q ++ E ++ M S G
Sbjct: 355 INFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 414
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y LT LC +++ A+ + ++ + G +P TY+ ++ + + A
Sbjct: 415 YPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474
Query: 437 LFDEAVRNGVE 447
L +E R G++
Sbjct: 475 LLEEMRRKGLK 485
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 11/271 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLL 239
Q + + M R G K D + +++ +C+ G A K + + + P+ +++
Sbjct: 261 QAMKLLDEM-RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNII 319
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
++ C G+ +A+RL +M R G V +N +++ LCRK RL A VL
Sbjct: 320 LRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN---FLCRK----RLLGRAIDVLE 372
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M +G N ++N L+ C+ ++ + AI+ M GC+P+ T+ L+ +L +
Sbjct: 373 KMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 432
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+V E+++++ S G + Y + L + + E A+ + E+M+ G PD TY
Sbjct: 433 KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYS 492
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
L+ +VD+A +F + G+ +KP
Sbjct: 493 TLLRGLGREGKVDEAIKIFHDM--EGLSIKP 521
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 17/287 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ + + GR + + F M YG K + + +++ +C G AE+L+ D +
Sbjct: 285 INGICKEGRLDEAIKFLNNMP-SYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P ++LI C L A + +M + G +++YN +L C++K
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH---GFCQEK--- 397
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D E + + M G ++ T+N L++ LCK + + A+++ ++ GC P T+
Sbjct: 398 KMDRAIEYLEI-MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITY 456
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEK 405
+I L + + E+++ M+ G K D + T L G+ R +++A+ +F
Sbjct: 457 NTVIDGLTKVGKTEYAVELLEEMRRKGL---KPDIITYSTLLRGLGREGKVDEAIKIFHD 513
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
M+ P + TY+ +M C + +A V G KP E
Sbjct: 514 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG--CKPTE 558
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E K L M Y G +V LI C+ +++ A ++ + G P+ T+ VLI
Sbjct: 124 EGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLI 183
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
++ + + E+++RM A + Y L LC ++++AM V ++
Sbjct: 184 GGYCKSGEIDKALEVLERMSVAPDVV---TYNTILRSLCDSGKLKEAMEVLDRQLQRECY 240
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY +L+ C + V +A L DE + G + Y V
Sbjct: 241 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 164/394 (41%), Gaps = 35/394 (8%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S VT L + LN +AG F W ++ + H+ E F + + F A+
Sbjct: 100 SGVTMRAGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAV 159
Query: 151 HDFLV----DNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
L DN ++ + I R A + + + M + YG + D+ ++
Sbjct: 160 WALLEEMRKDNSVLITSELFIVLIRRFASARLVEKAIEVLDEMPK-YGCEPDEYVFGCLL 218
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ LC+NG A L +D P + L+ GWC +GKL EAK + +M GFE
Sbjct: 219 DALCKNGSVKQAASLFEDMRVRFSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEP 278
Query: 267 GTVAYNCILDCVSKLCRKKDPFRL----------------------------DSEAEKVL 298
V +N +L S + D F L EA +V
Sbjct: 279 DIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVF 338
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
++ME G +V T+ LIS CK + ++ M + G PN+ T+L ++ + +
Sbjct: 339 VEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKK 398
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSET 417
+ E E+I+ M+ G + Y + RL C + ++Q + ++ +M+ +P+ +T
Sbjct: 399 EELEECLELIESMRMVG-CVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDT 457
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+ +++ + + +A F E + G+ P+
Sbjct: 458 FVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQ 491
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
N V E F VLI R E AI++ M ++GC P+E F L+ +L + V +
Sbjct: 170 NSVLITSELFIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQ 229
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ + M+ ++ + + L C ++ +A V +M+ G PD ++ L++
Sbjct: 230 AASLFEDMR-VRFSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLS 288
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ ++ A L E VR G E Y +
Sbjct: 289 AYSMAGKMTDAFDLLKEMVRKGCEPNANSYTI 320
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 32/348 (9%)
Query: 135 SFFTDYF--GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
S ++F GR++D I+ +V+ + L + +D + +AG P + FE + +
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-KS 545
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDE 251
F D S +++ L + G+A+ +L + D + +++I G+C GK+++
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK--------------- 296
A +L EM GFE V Y ++D ++K+ R + + L EA+
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 297 -------------VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+L ++ G+ NV T+N L+ L K +A+ F M E C P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N+ T+ +LI L + + + M+ G Y ++ L I +A ++F
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
++ K +G PDS Y+ ++ NR A +LF+E R G+ + K
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNK 833
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 136/336 (40%), Gaps = 38/336 (11%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-N 227
CID + G+ FF +E + G K D+ + ++ LC+ A ++ + N
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P + +I G+ GK DEA L G +AYNCIL C+ K+ + +
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 288 FRLDSEAEK----------VLLDM-----------------EYNGVPRNVETFNVLISNL 320
R+ E +K +L+DM + G+ NV T N+++ L
Sbjct: 363 LRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK ++ ++A +F +M C P+E TF LI L + RV + ++ ++M +
Sbjct: 423 CKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNS 482
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + R E +++ M +PD + + M +K A+F+
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE- 541
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPI--AVKKGKKRET 474
E+K + + D R I +K G ET
Sbjct: 542 ------EIKSRRFVPDARSYSILIHGLIKAGFANET 571
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 144/351 (41%), Gaps = 47/351 (13%)
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
V+ + +C+ ++ G+ + L FE M++D + + ++++ LC G A
Sbjct: 343 VIAYNCILTCLRKM---GKVDEALRVFEEMKKDAA--PNLSTYNILIDMLCRAGKLDCAF 397
Query: 220 KLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+L +D+ + +FP+ + ++++ C KLDEA + +M + + ++D
Sbjct: 398 EL-RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDG 456
Query: 278 VSKLCRKKDPFR-----LDSE-----------------------AEKVLLDMEYNGVPRN 309
+ K+ R D ++ LDS+ K+ DM +
Sbjct: 457 LGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPD 516
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
++ N + + K E +F + P+ ++ +LI L +A E E+
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
MK G + + Y + C ++ +A + E+MKT G P TY ++ +
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636
Query: 430 RVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYLKKPIAVKKG 469
R+D+A LF+EA +E+ Y R+D YL ++KG
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 67/150 (44%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P E++N L+ + + R + ++ M G P+ T + ++ S +A ++ EG
Sbjct: 94 LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGF 153
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+++ M+ + Y + + + +++F++M+ G+ P + L+ +
Sbjct: 154 DVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
RVD A +L DE + ++ Y V
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 89/237 (37%), Gaps = 44/237 (18%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
LL+ C + D ++ EM GF G CI +S C K + R E V
Sbjct: 105 LLVMARCRN--FDALDQILGEMSVAGF--GPSVNTCIEMVLS--CVKANKLR---EGFDV 155
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ +M + LI + S+ + LF +M E G P F LI+ +
Sbjct: 156 VQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 358 AARVGEGDEMIDRMKSAGY---------------AIGKKD-------------------- 382
RV ++D MKS+ +GK D
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + LC R+++A+ +FE ++ + P + Y+ ++ + + + D+A +L +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+YN +L +++ CR D +++L +M G +V T ++ + K + +
Sbjct: 100 SYNSLLLVMAR-CRNFDAL------DQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREG 152
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI---DRMKSAGYAIGKKDYYEF 386
+ M ++ P + + LI + + V D M+ +M+ GY +
Sbjct: 153 FDVVQNMRKFKFRPAFSAYTTLIGAF---SAVNHSDMMLTLFQQMQELGYEPTVHLFTTL 209
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ R++ A+S+ ++MK+ + D Y++ + + +VD A F E NG
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG- 268
Query: 447 EVKPKE 452
+KP E
Sbjct: 269 -LKPDE 273
>gi|297795031|ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311235|gb|EFH41659.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 157/363 (43%), Gaps = 13/363 (3%)
Query: 99 LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNK 158
+V LN +G A++ F +W + S ++ GRRK F + D L
Sbjct: 114 IVSDVLNRGNLSGEAMVTFFNWAIREPGVSKDVDSYCVILRALGRRKFFSFMMDVLRGMV 173
Query: 159 -EVLGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
E + P + L +D VRA + + FE E YG K +S ++ LCE +
Sbjct: 174 CEGVNPDLRCLTIAMDSFVRAHYVRRAIELFEESE-SYGVKCSTESFNALLRCLCERSHV 232
Query: 216 SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
S A + +I D +++I GW G+++ +++ +EM GGF ++Y+ ++
Sbjct: 233 SAANSVFNAKKGKIPFDSCSYNIMISGWSKLGEIEGMEKVLKEMVEGGFVPDCLSYSHLI 292
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ + + R D ++ +M++ G + +N +I N R +++++ + R
Sbjct: 293 EGLGRAGRINDSV-------EIFDNMKHKGSVLDANVYNAMICNFISARDFDESMRYYRR 345
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M + C PN T+ L+ L + +V + E+ + M S G FL LC
Sbjct: 346 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGILPTTGLVTSFLKPLCSYGP 405
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV--EVKPKEY 453
AM +++K + G Y LL+ + + ++DE G +V+ EY
Sbjct: 406 PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQECGYPSDVEVYEY 465
Query: 454 RVD 456
VD
Sbjct: 466 IVD 468
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 194/470 (41%), Gaps = 31/470 (6%)
Query: 31 RFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIF 90
RF P N + F S P P+ P A + + + + P L+
Sbjct: 16 RFIPISIFNSHLRYFCSDPQEQPQN-SRPRSRNASKTAKTIANLINSKPFSNGLLSSLL- 73
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
+T + + V TL + +A L F W TQ FSHT E+ + GR ++
Sbjct: 74 --ITISKTTVLRTLRLIKDPSKA-LRFFKW-TQQKGFSHTPESYFIMLEILGRERNLNVA 129
Query: 151 HDFLVDNKE------VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
+FL ++ L + S I AG + + F+ M + +
Sbjct: 130 RNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTM-KSIAVSPSVVTFNS 188
Query: 205 VVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++ L + G + A+++ + + PD ++LI+G+C + +DE R REM
Sbjct: 189 LMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESF 248
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
+ V YN ++D + + + + L + K + G+ NV T+ LI C
Sbjct: 249 NCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGK-----KCEGLNPNVVTYTTLIRGYCM 303
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS-AGYAIGKK 381
+ E+A+ + M G PN T+ L+K L +A ++ + ++++RMKS G++
Sbjct: 304 KQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTF 363
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
+ + C +++A+ VFE MK DS +Y L+ C D A LFDE
Sbjct: 364 TFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDEL 423
Query: 442 VRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPE--KMARKRRRLKQI 489
+ + ++ KP+A E+L E K + R ++Q+
Sbjct: 424 FEKEILL--------SKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQL 465
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 104/254 (40%), Gaps = 10/254 (3%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
+G K S + E LCE+G AE++++ D + +I G C +G +
Sbjct: 433 FGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESG 492
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L M R F Y+ ++D +KD L E + +L Y P+ T
Sbjct: 493 YELLMWMLRRDFLPDIEIYDYLIDGF----LQKDKPLLAKETLEKMLKSSYQ--PK-TST 545
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ +++ L + + ++ + M E N ++ L+ + E+I+ +
Sbjct: 546 WHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLY 605
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
GY + ++ +FL + ++ +A + + N D + + + C N+V
Sbjct: 606 KNGYYVKIEEVAQFLLKR---GKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVS 662
Query: 433 KANALFDEAVRNGV 446
+A +L E V NG+
Sbjct: 663 EAFSLCYELVENGL 676
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 127/267 (47%), Gaps = 9/267 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFP 231
L AGR + L F M +D D + +V LC+ G A+ ++++ A P
Sbjct: 54 LCDAGRVVEALEHFRAMAKDCA--PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAP 111
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D LI G C G ++A R+ ++ + G A+ I + +LC K + L
Sbjct: 112 DTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETI---IQRLCNKYNSVEL- 167
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A KVL + G V FN++I+ CK + + A KL M E GC PN TF +L
Sbjct: 168 --ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTIL 225
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A RVGE +++++M + G + Y + LC +++ A +F+ M+
Sbjct: 226 ITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 285
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALF 438
P+ T+++L+ C R+++A L+
Sbjct: 286 PPNVVTHNILIDGLCKAKRIEEARQLY 312
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 13/285 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY--AEKLV 222
T ++ ID L + G Q E + + G + ++++LC N Y S A K++
Sbjct: 115 TFSTLIDGLCKFGSEEQAFRVLEDVIQ-RGMGNSDAAFETIIQRLC-NKYNSVELASKVL 172
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ F P + +L+I G+C LD A +L M G + + ++ L
Sbjct: 173 GVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTIL---ITGL 229
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C+ EA+++L M G NV T++ +I+ LCK + +DA +LF M C
Sbjct: 230 CKANRV----GEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 285
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T +LI L +A R+ E ++ RM+ G A Y + LC ++++A
Sbjct: 286 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 345
Query: 402 VFEKMKTDG-HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+F+ + G ++ TY L + A R+ A +F V G
Sbjct: 346 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKG 390
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 44/289 (15%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GF LV+ C+ A KL++ + P+ +LI G C ++ EA
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 238
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++L +M GG V Y+ +++ + K + D + L ME P NV T
Sbjct: 239 QQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYEL-------FQLMERRNCPPNVVT 291
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
N+LI LCK +R E+A +L++RM E GC P+ T+ LI L ++ +V E ++ +
Sbjct: 292 HNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP 351
Query: 373 SAGYAIGKKDYYEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC----- 426
+G + Y L + R+ A +F + G +PD TY L+ ++C
Sbjct: 352 ESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRA 411
Query: 427 ------------------------------AHNRVDKANALFDEAVRNG 445
N ++A LFD G
Sbjct: 412 VEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG 460
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 9/262 (3%)
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGK 248
M D GF D + ++ + C+ A +LV++ A++ FP + G +G
Sbjct: 385 MLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGN 444
Query: 249 LDE-AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL--LDMEYNG 305
E A +L M G + YN +++ +++ + + E+V+ D ++N
Sbjct: 445 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAV---LEQVIDKRDRKFNP 501
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
V+ L+ +LC++ R++DA +L ++M E G +++ L+ L + R E
Sbjct: 502 SSSAVDA---LVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEAT 558
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ + M SAG A ++ LC +++ A + ++M G PD ET + L+ +
Sbjct: 559 QVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGY 618
Query: 426 CAHNRVDKANALFDEAVRNGVE 447
C R D A L +E G+E
Sbjct: 619 CKSGRADLARKLLEEMTEAGLE 640
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 101/244 (41%), Gaps = 44/244 (18%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI+G+ G LD A +L EM GFE V + ++ LC D R+ EA +
Sbjct: 14 ILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLM---KGLC---DAGRV-VEALEH 66
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY- 356
M + P +V T+ L+ LCK + ++A + M GC P+ TF LI L
Sbjct: 67 FRAMAKDCAP-DVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 357 -----QAARV-------GEGDE------MIDRM-----------KSAGYAIGKK------ 381
QA RV G G+ +I R+ K G I K
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
+ + C + ++ A + E M G P+ T+ +L+T C NRV +A L ++
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 442 VRNG 445
V G
Sbjct: 246 VTGG 249
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 14/293 (4%)
Query: 135 SFFTDY--FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
+ F Y GR D I LVD T S I + R +V+ E M
Sbjct: 365 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 424
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDK-ICDLLIKGWCVDGKLDE 251
GF ++L V+ L E + A +L A DD I +L+++G K ++
Sbjct: 425 -GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNK 483
Query: 252 AKRLAREMYRG---GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
A + ++ F + A + +++ + ++ R D A+++L M G
Sbjct: 484 ALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDD-------AKQLLHKMSERGFAA 536
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V ++N L+S L +++R ++A ++F M G P +T V+I L AA+V + E++
Sbjct: 537 AVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELV 596
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
RM G + + C R + A + E+M G P+ T+DLL
Sbjct: 597 QRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 136/371 (36%), Gaps = 51/371 (13%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQV 182
F+ T + + F + KD + + L ++ V T I L +A R +
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 238
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIK 241
E+M G + + V+ LC+ G A +L + P + + ++LI
Sbjct: 239 QQLLEKMVTG-GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILID 297
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G C +++EA++L M G + YN ++D LC+ F++D EA ++ +
Sbjct: 298 GLCKAKRIEEARQLYHRMRETGCAPDIITYNSLID---GLCKS---FQVD-EAFQLFQTI 350
Query: 302 EYNGV-PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+GV N T++ L + R DA ++F + + G P+ T+ LI + +R
Sbjct: 351 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 410
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG---------- 410
E E+++ M S G+ L L E+A+ +F+ M G
Sbjct: 411 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 470
Query: 411 ----------------------------HNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
NP S D L+ C R D A L +
Sbjct: 471 VVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMS 530
Query: 443 RNGVEVKPKEY 453
G Y
Sbjct: 531 ERGFAAAVSSY 541
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN+ T+ +LI+ A + ++++ MKS G+ + + LC R+ +A+
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
F M D PD TY L+ C + D+A + E + G
Sbjct: 65 EHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARG 108
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 9/283 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + + L R GR Q L F+ + D S ++ LC+ G A L +
Sbjct: 61 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 120
Query: 224 D--TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
A P+ + L+ G C +LD A+ + E + F V YN ++ + +L
Sbjct: 121 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQL 180
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R EA M G + +FN +I+ LC+ RR DA+++F M +
Sbjct: 181 GRVD-------EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 233
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
HPN T+ V+I L ++ ++ E +++DRM S G Y + R++ A+
Sbjct: 234 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 293
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ +M + G PD TY +++ K C RVD A+ +F E V N
Sbjct: 294 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 336
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 8/272 (2%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ L + GR F +M G + + + +V+ LC+ A ++ +
Sbjct: 103 INGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRD 162
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PD + L+ G++DEA +M G+ V++N I ++ LCR +
Sbjct: 163 FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAI---ITGLCRAR--- 216
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL ++A +V +M N+ T++V+I LCK + ++A +L RM GC P+ +
Sbjct: 217 RL-ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAY 275
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ A R+ ++ RM S G Y + +LC + R++ A +F ++
Sbjct: 276 TPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVA 335
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ +P+ TY L+ +C +RVD+ + E
Sbjct: 336 NKCSPNVVTYSALIGGYCRASRVDEGGKVMRE 367
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 12/247 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
L + GR + L F +M + G+ S ++ LC + A ++ + + F P
Sbjct: 177 LFQLGRVDEALATFTQMTEE-GYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP 235
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ ++I G C +LDEA++L M G VAY ++ S RLD
Sbjct: 236 NLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA------AGRLD 289
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A +L M G +V T+ V+I LCK+ R +DA ++F + C PN T+ L
Sbjct: 290 S-ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSAL 348
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I +A+RV EG +++ M + Y + L ++R E+A +F +M G
Sbjct: 349 IGGYCRASRVDEGGKVMREMACRPNVV---TYNTMIWGLSMVDRNEEAYGMFREMSECGF 405
Query: 412 NPDSETY 418
PD+ TY
Sbjct: 406 VPDARTY 412
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF---PDDKICDLLIKGWCVDGKLD 250
G + + + ++++ LC G + A + D + E+ PD LI G C G++D
Sbjct: 55 GMQCNDRTTSIILQGLCRCGRVAQALEHF-DASLELAHAQPDVVSYTTLINGLCKLGRVD 113
Query: 251 EAKRLAREMYR-GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
A L R+M GG YN ++D LC++ RLD+ A V+ + +
Sbjct: 114 AAFDLFRKMVAAGGCRPNAFTYNALVD---GLCKQD---RLDA-ARAVITEARKRDFAPD 166
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V T+N L++ L ++ R ++A+ F +M E G P +F +I L +A R+ + E+ +
Sbjct: 167 VVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFN 226
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M + Y + LC +++++A + ++M ++G PD Y L+ + A
Sbjct: 227 EMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAG 286
Query: 430 RVDKANALFDEAVRNG 445
R+D A L V G
Sbjct: 287 RLDSALGLLRRMVSQG 302
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 18/279 (6%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
+VRAG Q L F E + +++ C A L+++ E +
Sbjct: 1 MVRAGSHNQALQLFR--ENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQC 58
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG-----TVAYNCILDCVSKLCRKKD 286
+D+ ++++G C G++ +A E + EL V+Y +++ + KL R
Sbjct: 59 NDRTTSIILQGLCRCGRVAQAL----EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 114
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
F L + + G N T+N L+ LCK R + A + + P+
Sbjct: 115 AFDLFRKM------VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVV 168
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ L+ +L+Q RV E +M GY + +T LC R+ A+ VF +M
Sbjct: 169 TYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM 228
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+P+ TY +++ C +++D+A L D V G
Sbjct: 229 IDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 267
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 111/287 (38%), Gaps = 65/287 (22%)
Query: 105 NFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTD-----YFGRRKDFKAIHDFLVDNKE 159
+F+P+ ++ +N + DE L+ FT Y F AI
Sbjct: 162 DFAPD----VVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAI--------- 208
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
I L RA R L F E ++RD F + + +V++ LC++ A
Sbjct: 209 ----------ITGLCRARRLADALEVFNEMIDRD--FHPNLVTYSVVIDGLCKSDQLDEA 256
Query: 219 EKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
++L+ +E PD L+ G+ G+LD A L R M G V Y ++D
Sbjct: 257 QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 316
Query: 278 VSKLCRKKDPF-----------------------------RLDSEAEKVLLDMEYNGVPR 308
+ K+ R D R+D E KV+ +M
Sbjct: 317 LCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD-EGGKVMREM---ACRP 372
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
NV T+N +I L + R+E+A +F M E G P+ T+ L ++L
Sbjct: 373 NVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 149/324 (45%), Gaps = 20/324 (6%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFE 187
+T S GRR+D I D L++ E LG + T CI L RAGR G +
Sbjct: 228 KTYSALMVALGRRRDTGTIMD-LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILK 286
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVD 246
ME D G D + ++++ LC G A++L K A+ PD L+ +
Sbjct: 287 TME-DEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNY 345
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G L+ KR EM G+ V Y + V LC+ ++D +A +L M G+
Sbjct: 346 GDLETVKRFWSEMEADGYAPDVVTYTIL---VEALCKSG---KVD-QAFDMLDVMRVRGI 398
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
N+ T+N LIS L +RR ++A++LF M G P ++++ I ++G+ ++
Sbjct: 399 VPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFID---YYGKLGDPEK 455
Query: 367 MID---RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+D +MK G L L + RI +A +F + G +PDS TY+++M
Sbjct: 456 ALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMK 515
Query: 424 KWCAHNRVDKANALFDEAVRNGVE 447
+ ++DKA L E + G E
Sbjct: 516 CYSKAGQIDKATKLLTEMLSEGCE 539
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 148/337 (43%), Gaps = 27/337 (8%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDN--KEVLGPK--TLASCIDRLVRAGRPTQVLGFFE 187
+ L++ T +G K+ +A + F + K+ L P TL + + +V+ GR +
Sbjct: 646 DVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVM 705
Query: 188 RMERDYGFKRDKDSLR-----LVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKG 242
G + +++E E S+AE LV N I DD + LI+
Sbjct: 706 EFVHQSGLQTSNQVWGELMECILIEAEIEEA-ISFAEGLV---CNSICQDDNLILPLIRV 761
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGT----VAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
C K +AK+L + + LGT +YNC++D + + A K+
Sbjct: 762 LCKQKKALDAKKLFDKFTK---SLGTHPTPESYNCLMDGLLGC-------NITEAALKLF 811
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
++M+ G N+ T+N+L+ K +R ++ +L+ M GC PN T ++I +L ++
Sbjct: 812 VEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKS 871
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + ++ + S ++ Y + L R E+AM +FE+M P+ Y
Sbjct: 872 NSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIY 931
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++L+ + V+ A LF ++ G+ K Y +
Sbjct: 932 NILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTI 968
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
F++ + G +S +++ L A KL + N P+ +LL+
Sbjct: 774 LFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAH 833
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
++DE L EM G + + +N I+ + K S + LD+ Y
Sbjct: 834 GKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVK-----------SNSINKALDLYY 882
Query: 304 NGVPRNVE----TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+ + T+ LI L K RSE+A+K+F M ++ C PN + +LI +A
Sbjct: 883 EIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAG 942
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
V ++ RM G K Y + L R++ A+ FE++K G +PD+ +Y+
Sbjct: 943 NVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYN 1002
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
L++ R+++A +LF E G+
Sbjct: 1003 LMINGLGKSRRLEEALSLFSEMKNRGI 1029
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 140/328 (42%), Gaps = 45/328 (13%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCID 171
L + ++Q N HT ET ++ ++ GR +D + D + K+V I+
Sbjct: 106 LSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLM--QKQV---------IN 154
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
R P L F+ + G ++ +L K+ + G+ N
Sbjct: 155 R-----NPNTYLTIFKALSIKGGIRQAPFALG----KMRQAGF----------VLNAYSY 195
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ I LL G+C EA ++ + M G + Y+ ++ L R++D
Sbjct: 196 NGLIYFLLQPGFC-----KEALKVYKRMISEGLKPSMKTYSALM---VALGRRRDT---- 243
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+L +ME G+ N+ T+ + I L + R +DA + M + GC P+ T+ VL
Sbjct: 244 GTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVL 303
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I +L A ++ + E+ +M+++ + Y +++ +E + +M+ DG+
Sbjct: 304 IDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGY 363
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFD 439
PD TY +L+ C +VD+A + D
Sbjct: 364 APDVVTYTILVEALCKSGKVDQAFDMLD 391
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 36/286 (12%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGW 243
F+ ME D G+ D + ++VE LC++G A ++ I P+ + LI G
Sbjct: 354 FWSEMEAD-GYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGL 412
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR-LDS---------- 292
+LDEA L M G +Y +D KL DP + LD+
Sbjct: 413 LNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKL---GDPEKALDTFEKMKKRGIM 469
Query: 293 --------------------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
EA+ + D+ G+ + T+N+++ K + + A KL
Sbjct: 470 PSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKL 529
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M GC P+ LI +LY+A RV E +M R+K A Y +T L
Sbjct: 530 LTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGK 589
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
++ +A+ +F MK G P++ T++ L+ C ++ VD A +F
Sbjct: 590 EGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMF 635
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
Y E L + I + I L+K ++ LD L E+ G F Y ++
Sbjct: 846 YNEMLCRGCKPNIITHNIIISALVKSNSINKALD----LYYEIISGDFSPTPCTYGPLIG 901
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ K R + EA K+ +M +Y P N +N+LI+ K A LF R
Sbjct: 902 GLLKAGRSE-------EAMKIFEEMPDYQCKP-NCAIYNILINGFGKAGNVNIACDLFKR 953
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M + G P+ ++ +L++ L+ RV + + +K G Y + L R
Sbjct: 954 MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+E+A+S+F +MK G +P+ TY+ L+ + VD+A +F+E G+E
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLE 1065
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 132/330 (40%), Gaps = 42/330 (12%)
Query: 154 LVDNKEVLGPKTLASC----IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L +N E LG A ID + G P + L FE+M++ G + + L
Sbjct: 424 LFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKR-GIMPSIAACNASLYSL 482
Query: 210 CENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
E G A+ + D N + PD ++++K + G++D+A +L EM G E
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLL----------------------------D 300
+ N ++D + K R + +++ + + L
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGS 602
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ +G P N TFN L+ LCK + A+K+F RM C P+ T+ +I L + R
Sbjct: 603 MKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGR 662
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMS-VFEKMKTDGHNPDSE 416
G +MK D+ T L G+ R+E A+ V E + G ++
Sbjct: 663 AGYAFWFYHQMKK----FLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQ 718
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LM +++A + + V N +
Sbjct: 719 VWGELMECILIEAEIEEAISFAEGLVCNSI 748
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK--LCRKKDPFRLDSEAEK 296
+ K + G + +A +M + GF L +YN ++ + + C+ EA K
Sbjct: 163 IFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCK---------EALK 213
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
V M G+ +++T++ L+ L + R + + L M G PN T+ + I+ L
Sbjct: 214 VYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLG 273
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+A R+ + ++ M+ G Y + LC ++++A ++ KM+ H PD
Sbjct: 274 RAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLV 333
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY LM+K+ + ++ + E +G
Sbjct: 334 TYITLMSKFGNYGDLETVKRFWSEMEADG 362
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 44/263 (16%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T I L++AGR + + FE M DY K + +++ + G + A L
Sbjct: 893 PCTYGPLIGGLLKAGRSEEAMKIFEEMP-DYQCKPNCAIYNILINGFGKAGNVNIACDLF 951
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
K E I PD K +L++ + G++D+A E+ G + TV+YN +++ + K
Sbjct: 952 KRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKS 1011
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R ++ L SE M+ G+ + T+N LI + + A K+F + G
Sbjct: 1012 RRLEEALSLFSE-------MKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGL 1064
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T+ LI+ ++ G KD +A S
Sbjct: 1065 EPNVFTYNALIRGHSKS--------------------GNKD---------------RAFS 1089
Query: 402 VFEKMKTDGHNPDSETYDLLMTK 424
VF+KM G +P++ T+ L K
Sbjct: 1090 VFKKMMIVGCSPNAGTFAQLPNK 1112
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 184/465 (39%), Gaps = 31/465 (6%)
Query: 1 MPPSTSLLLGRLLLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTS-------NP 53
+PP + ++G LL P F+ +L+ L+ + +S NP
Sbjct: 104 LPPRSRYVMGSPLLATP----ACGAYDVLWGFAAGRFLSILAASDEDQGSSEQEAAASNP 159
Query: 54 KTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRA 113
+ +D IA ++ NLEA +S L ++V + L+ A R
Sbjct: 160 EGVDRVCAAIADVVASGADANLEAALSALSPPL---------CEAVVLAVLHRFKHAHRP 210
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKTLASCID 171
F W T + F+HT T G+ + F+++ + + L I
Sbjct: 211 SYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGALSMDAFKVAIK 270
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
AG +G FE M ++ GF +S ++ L + G A ++ + P
Sbjct: 271 SFAAAGEIKNAVGVFELMRKN-GFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSP 329
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + L+ WC L EA R+ EM G + V +N +++ + + R+
Sbjct: 330 DLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRR------- 382
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA K+ M+ G P NV T+ +LI + CK + + A++ F M E C P+ T+ L
Sbjct: 383 PEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCL 442
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ A ++ +++ M G + Y + L + A +++KM G
Sbjct: 443 LVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGL 502
Query: 412 NPDSETYDLLMTKW-CAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P TY+++M + + A+++E + G+ Y V
Sbjct: 503 EPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTV 547
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 18/266 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+ IK + G++ A + M + GF+ G ++NC+L ++K L EA +V
Sbjct: 267 VAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKE-------GLGREARQV 319
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M P ++ ++ L+ C R +A +++ M E G P+ +I+ L +
Sbjct: 320 FDKMHGQYSP-DLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLR 378
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
R E +M + MK+ G Y + C +++ AM FE+M+ PD T
Sbjct: 379 GQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVAT 438
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPE 477
Y L+ + ++D+ A+ +E + G + Y A+ K +P+
Sbjct: 439 YTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYN----------ALIKLLTNRNMPD 488
Query: 478 KMARKRRRLKQIRLSFVKKPKRMMMR 503
AR +++ + L MMM+
Sbjct: 489 DAARIYKKMIKKGLEPTIHTYNMMMK 514
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 41/216 (18%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI+ C GK+D A EM + Y C+L + ++D V
Sbjct: 406 MLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLL------VGYGNAKQMD-RVTAV 458
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L +M G P + T+N LI L +DA +++ +M + G P T+ +++KS +
Sbjct: 459 LEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYF- 517
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
VG+ + YA+G +V+E+M G PD +
Sbjct: 518 ---VGDSN----------YAMG--------------------CAVWEEMHQRGICPDVNS 544
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
Y + + H R ++A +E + G++ +Y
Sbjct: 545 YTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDY 580
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 151/331 (45%), Gaps = 13/331 (3%)
Query: 125 ANFSHTDETLSFFTDYFGRRK---DFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQ 181
F+ T + D F +R D + + +V T ++ ID L ++ + +
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLI 240
E M + G D + ++ LC+ AE++++ A PD + +I
Sbjct: 181 AKEVLEEM-KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
+C GKL EA++ +EM + V YN ++D + KL + +EA+ +L
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI-------AEAQVILDQ 292
Query: 301 MEYNG-VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M+ +G V +V T++ +I+ LCK +A KL RM + GC+P+ T+ +I L +
Sbjct: 293 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ E + ++ MK AG A Y ++ LC ++++A V E+M+ G P+ TY+
Sbjct: 353 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 412
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
++ C R+ +A L E P
Sbjct: 413 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSP 443
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI + KL+EA +L EM G V YN ++D + KL + A+ V+
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL-------SMVGAAQDVV 115
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G NV TFN L+ CK +DA KL M G PN T+ LI L ++
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E E+++ MK++G Y + LC ++IE+A + +M G PD Y
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 419 DLLMTKWCAHNRVDKANALFDE 440
++ +C ++ +A E
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQE 257
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++L+ C + A+ + ++M GGF + +N ++D C++ + +A K
Sbjct: 96 NVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVD---GFCKRGNV----DDARK 148
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M G+ NV T++ LI LCK ++ +A ++ M G P+ T+ LI L
Sbjct: 149 LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLC 208
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+A ++ E ++M+ RM +G Y + C ++ +A ++M+ +PD
Sbjct: 209 KADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVV 268
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY+ ++ C ++ +A + D+ +G
Sbjct: 269 TYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA K+L +M G P N+ T+NVL+ LCK+ A + +M E G PN TF L+
Sbjct: 75 EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 134
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ V + +++ M + G Y + LC ++ +A V E+MK G
Sbjct: 135 DGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVT 194
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD+ TY L+ C +++++A + +G
Sbjct: 195 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 10/203 (4%)
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G L A L EM GF + I+ ++ + LD + +
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMA------NAGDLDGAMDH----LRS 50
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G NV T+ LI+ + ++ E+A+KL M E GC PN T+ VL+ +L + + VG
Sbjct: 51 MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA 110
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+++ +M G+A + + C ++ A + M G P+ TY L+
Sbjct: 111 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 170
Query: 424 KWCAHNRVDKANALFDEAVRNGV 446
C + +A + +E +GV
Sbjct: 171 GLCKSQKFLEAKEVLEEMKASGV 193
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 177/438 (40%), Gaps = 45/438 (10%)
Query: 86 LHLIFSHVTPT---PSLVQSTLNFSPEAGRAI-----LGFNHWLTQNANFSH-TDETLSF 136
L L FS + + PS+V+ + I L F +W T ++ H + +
Sbjct: 97 LSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNE 156
Query: 137 FTDYFGRRKDFK-AIH--DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
D G+ + F A H D + + +T I R VRAG ++ + F RME DY
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME-DY 215
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G DK + +V+ L AS A+ + PD + L++GWC G++ EA+
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAE 275
Query: 254 RLAREMYRGGFELGTVAYNCILDCV---SKLCRKKDPFR--LDS---------------- 292
++ +EM G E Y+ ++D + ++ R D F LDS
Sbjct: 276 KVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVH 335
Query: 293 ----EAEKVLL---DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
EKVL M+ G + T+N LI C+ E+A+K+ M + C N
Sbjct: 336 VKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNA 395
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+TF + + + + V M +M A Y + G + + + + ++
Sbjct: 396 STFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKE 455
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE-YRVDPRYLKKPI 464
M P+ TY LL+T +C + A LF E V Y + L++
Sbjct: 456 MDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR-- 513
Query: 465 AVKKGKKRETLPEKMARK 482
+ KK E L EKM +K
Sbjct: 514 -AGQLKKHEELVEKMIQK 530
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 139/316 (43%), Gaps = 7/316 (2%)
Query: 138 TDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGF 195
D GR F A +V+ P+T A R V AG Q + F+ ME G
Sbjct: 121 VDALGRAHQFDAAWRLVVEAAADGAATPRTFAVLARRYVAAGLTRQAVRAFDDMEAFLGR 180
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+ D +++ LC+ Y A ++ + P++K+ +LI GWC + D A++
Sbjct: 181 EPDAQEFTTLLDTLCKYKYPKVAVEVFNKRKYKYEPNEKMYTILIYGWCKVNRSDMAQKF 240
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD---SEAEKVLLDMEYNGVPRNVET 312
++M G E V YN +L+ + + R D + AE +L +M G+ +V +
Sbjct: 241 LKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTS 300
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+++++ + ++E + +F M + G P T+ +IK L R+ + + ++ M
Sbjct: 301 YSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAESLLGEMV 360
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT--DGHNPDSETYDLLMTKWCAHNR 430
S G Y F G + + A+ ++ KMK PD +Y++L+ + +R
Sbjct: 361 SEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDR 420
Query: 431 VDKANALFDEAVRNGV 446
+ L+++ V
Sbjct: 421 HETVMELWNDMCERAV 436
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 3/150 (2%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P N + ++ ++ L + + + A +L G TF VL + A +
Sbjct: 111 PPNADAYDAVVDALGRAHQFDAAWRLVVEAAADGA-ATPRTFAVLARRYVAAGLTRQAVR 169
Query: 367 MIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
D M++ G +++ L LC + + A+ VF K K + P+ + Y +L+ W
Sbjct: 170 AFDDMEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRKYK-YEPNEKMYTILIYGW 228
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C NR D A + + +G+E Y +
Sbjct: 229 CKVNRSDMAQKFLKDMIDHGIEPNIVTYNI 258
>gi|326524037|dbj|BAJ97029.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 599
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 163/393 (41%), Gaps = 20/393 (5%)
Query: 59 PDQVIARS--LSGELLENLEADPLPISQRLH--LIFSHVTP-TPSLVQSTLNFSPEAGRA 113
PD +A S L+ LL ADP QRL L S + P +P L+ + L A
Sbjct: 21 PDHSLASSAELAHRLLRRHGADP----QRLASALSASGLDPASPRLLDAVLRRCGAASSL 76
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRL 173
LG+ HW + + + +L+ F R +L L+ + RL
Sbjct: 77 ALGYFHWCSPSLPSAPLPSSLALLAKCFSRASAAPCPSLLAPLPSHLLSASILSPVLRRL 136
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD 233
P +VL F + ++E L + G+ + AE+LV++ +
Sbjct: 137 P----PPRVLPFALSLLSSRPAHDHPSLFLSLLESLSKTGHVAAAERLVEELQPRLPLSL 192
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ L+ GWC KLDEAK + M G V +N +L R +D F L E
Sbjct: 193 RHYTALLYGWCRLAKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVADGRFEDAFELARE 252
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
ME P N ++ L+ L R ++ +++F M GC P+ T+ L+
Sbjct: 253 -------MERRDCPPNAVSYTTLMQGLGSKGRVDEVMRVFVEMRRKGCTPDSVTYGTLVT 305
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ +A R+ +G E +D M G + Y F +++E+ + + E+M+ P
Sbjct: 306 AFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLGFFVAHEKEQQLEECLELMERMRECRCPP 365
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
D Y++++ C +A AL++E +G+
Sbjct: 366 DLNIYNVVIRLSCKLGETKQAIALWNETENSGL 398
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 101/260 (38%), Gaps = 42/260 (16%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR-----------KKDP 287
L++G G++DE R+ EM R G +V Y ++ K R +D
Sbjct: 268 LMQGLGSKGRVDEVMRVFVEMRRKGCTPDSVTYGTLVTAFCKAGRLSQGYEFLDSMSRDG 327
Query: 288 FRLD-----------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
R+D E +++ M P ++ +NV+I CK+ ++ AI
Sbjct: 328 LRVDPGVYLGFFVAHEKEQQLEECLELMERMRECRCPPDLNIYNVVIRLSCKLGETKQAI 387
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY------ 384
L+ G P TF +++ L VG+G ++D +G+ +
Sbjct: 388 ALWNETENSGLSPGVDTFAIMVNGL-----VGQGS-LVDACNYFKDMVGRGLFVAPQYGV 441
Query: 385 --EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ L L E++E A V+ + + G + + + + A V +A + + +
Sbjct: 442 LKDLLNALVRDEKLELAKDVWGCIASRGCELNVSAWTIWIHALYAKKHVKEACSYCLDML 501
Query: 443 RNGVEVKPKEYRVDPRYLKK 462
G+ +P + + LKK
Sbjct: 502 EAGLMPQPDTFAKLMKGLKK 521
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 137/316 (43%), Gaps = 35/316 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ + + GR F M YG D S V++ LC G A++L+ + +
Sbjct: 319 INSICKQGRVDDAFEFLNNMG-SYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKN 377
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CV-------- 278
P +++ + I C G +D+A L +M G +G V YN +++ CV
Sbjct: 378 CPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSAL 437
Query: 279 -------------------SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ LC + RLD+ AE +L +M N P NV TFNVL+S
Sbjct: 438 ELFNSLPCEPNTITYTTLLTGLCHAE---RLDAAAE-LLAEMMQNDCPLNVVTFNVLVSF 493
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C+ E+AI+L +M E GC PN TF L+ + + E E++ + S G ++
Sbjct: 494 FCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLD 553
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + L +RIE+A+ +F ++ G P + Y+ +++ C D+A F
Sbjct: 554 TITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFA 613
Query: 440 EAVRNGVEVKPKEYRV 455
V N Y +
Sbjct: 614 HMVSNSCMPNESTYVI 629
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 12/287 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
I+ + R R R+ YGF+ D S V++ LC E L + N
Sbjct: 214 INGMCREDRVDDARQILNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENN 272
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P++ D+L++ +C G ++ A + M G T N +++ + K R D F
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAF 332
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ L +M G + ++ ++ LC+ R EDA +L M C PNE TF
Sbjct: 333 -------EFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTF 385
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
I L Q + + +I++M G ++G Y + C R++ A+ +F +
Sbjct: 386 NTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPC 445
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ P++ TY L+T C R+D A L E ++N + + V
Sbjct: 446 E---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV 489
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 29/265 (10%)
Query: 204 LVVEKLCEN-GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++E +C++ G+ + L + A P+ +++I G C + ++D+A+++ +
Sbjct: 177 VLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSY 236
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSE----------------------------A 294
GF+ TV+Y +L + R +D L E A
Sbjct: 237 GFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERA 296
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+VL M +G N N++I+++CK R +DA + MG +GC P+ ++ ++K
Sbjct: 297 IEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKG 356
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L +A R + E+++ M + + F+ LC I+QA+ + E+M G +
Sbjct: 357 LCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVG 416
Query: 415 SETYDLLMTKWCAHNRVDKANALFD 439
TY+ L+ +C RVD A LF+
Sbjct: 417 IVTYNALVNGFCVQGRVDSALELFN 441
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 13/240 (5%)
Query: 218 AEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A +LV + T+ PD +C LI+ C G+ +A R+ R G + AYN +
Sbjct: 54 AARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTL-- 111
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
V+ CR RLD+ A +++ M VP + T+ LI LC R DA+ L M
Sbjct: 112 -VAGYCRYG---RLDA-ARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDM 163
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
C P+ T+ VL++++ +++ G+ +++D M++ G Y + +C +R+
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
+ A + ++ + G PD+ +Y ++ CA R + LF E V N P E D
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVEN--NCVPNEVTFD 281
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 11/242 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC G S A ++++ P D + L+ G+C G+LD A+RL M
Sbjct: 76 LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---- 131
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ AY + LC D R+ +A +L DM +V T+ VL+ +CK
Sbjct: 132 -PVPPDAYT-YTPLIRGLC---DRGRV-GDALSLLDDMLRRECQPSVVTYTVLLEAVCKS 185
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
A+K+ M GC PN T+ V+I + + RV + ++++R+ S G+ Y
Sbjct: 186 SGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSY 245
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
L LC +R E +F +M + P+ T+D+L+ +C V++A + D
Sbjct: 246 TTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSE 305
Query: 444 NG 445
+G
Sbjct: 306 HG 307
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 146/358 (40%), Gaps = 16/358 (4%)
Query: 94 TPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDY-----FGRRKDFK 148
T +L +N + GR F +L ++ + +T+S+ T GR +D K
Sbjct: 309 TANTTLCNIVINSICKQGRVDDAF-EFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAK 367
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ + +V T + I L + G Q + E+M +YG + +V
Sbjct: 368 ELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMP-EYGCSVGIVTYNALVNG 426
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C G A +L E P+ L+ G C +LD A L EM + L
Sbjct: 427 FCVQGRVDSALELFNSLPCE--PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNV 484
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V +N + VS C+K EA +++ M +G N+ TFN L+ + + SE+
Sbjct: 485 VTFNVL---VSFFCQKG----FVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEE 537
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A++L + + G + T+ ++ L + R+ E +M ++ G Y + L+
Sbjct: 538 ALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILS 597
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC ++A+ F M ++ P+ TY +L+ + +A + E GV
Sbjct: 598 ALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 156/356 (43%), Gaps = 18/356 (5%)
Query: 97 PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD 156
P V + + + + A+ FN T++ F HT ET + G F+A+ D L +
Sbjct: 7 PKHVAAVIRYQNDPLNALKMFNQVKTEDG-FKHTLETYKCMIEKLGLHGKFEAMEDVLAE 65
Query: 157 NKEVLGPKTLASCIDRLVR----AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
++ + K L ++R G+ + + FERM+ Y + S ++ L E
Sbjct: 66 MRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDF-YDCEPSVQSYNAIMNILVEY 124
Query: 213 GYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
GY S A K+ +KD I+PD + +K +C+ G+ A RL M G E V
Sbjct: 125 GYFSQAHKVYMRMKDIG--IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+Y ++ K + + + L E K G+ ++ TFN LI LCK +++
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLK-------QGICPDILTFNKLIHVLCKKGNVQES 235
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
KLF ++ + G PN TF + I+ L + + E +++ + S G Y +
Sbjct: 236 EKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICG 295
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
C ++ +A KM G P+ TY+ ++ +C + A+ + +A+ G
Sbjct: 296 FCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G + ++ + ++ C+ G A+K+++D + F PD+ LI G C DG ++ A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ E GF+ + YN ++ +SK L +A +++ DM +G ++ T
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQ-------GLVLQALQLMKDMMEHGCSPDIWT 428
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N++++ LCK+ DA + GC P+ TF LI + + + E++D M
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S G Y L LC +++ + F+ M G P+ TY++L+ +C +V
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 433 KANALFDEAVRNGV 446
+A LF E G+
Sbjct: 549 EAMELFKEMKTRGL 562
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 138/323 (42%), Gaps = 53/323 (16%)
Query: 165 TLASCIDRLVRAGRPTQVLG-FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T +S I+ L G + + F+E ME+ GFK +V+ L + G A +L+K
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEK--GFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
D PD +L++ G C G L +A + + G +N ++D C
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID---GYC 472
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++++ +A ++L M +G+ +V T+N L++ LCK R+ ++ + F M E GC
Sbjct: 473 KQRNM----DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI--------- 393
PN T+ +LI+S + +V E E+ MK+ G D T +CG+
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT---PDIVTLCTLICGLCSNGELDKA 585
Query: 394 ----------------------------ERIEQAMS--VFEKMKTDGHNPDSETYDLLMT 423
E++ +M+ +F KM PD+ TY +++
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645
Query: 424 KWCAHNRVDKANALFDEAVRNGV 446
+C +D A+ E + G+
Sbjct: 646 SYCKTGNIDLAHTFLLENISKGL 668
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 124/290 (42%), Gaps = 16/290 (5%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
L PK +A+ I P L F +++ + GFK ++ + ++EKL +G E
Sbjct: 5 LQPKHVAAVIRY---QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMED 61
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVD----GKLDEAKRLAREMYRGGFELGTVAYNCILD 276
++ + + D K+ + + G D GK+ EA + M E +YN I++
Sbjct: 62 VLAEMRKNV--DSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMN 119
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ + + S+A KV + M+ G+ +V T + + + C R A++L M
Sbjct: 120 ILVE-------YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM 172
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
GC N ++ +I Y+ E + D M G + + + LC +
Sbjct: 173 PGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+++ +F K+ G P+ T+++ + C +D+A L + V G+
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGL 282
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 116/306 (37%), Gaps = 44/306 (14%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
GRPT L M G + + S V+ + A L + + I PD
Sbjct: 159 TGRPTAALRLLNNMPGQ-GCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDIL 217
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ LI C G + E+++L ++ + G +N + LCRK EA
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF---IQGLCRKGAI----DEA 270
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
++L + G+ +V ++N LI CK + +A ++M G PNE T+ +I
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF----------- 403
+A + D+++ G+ + Y + LC + +AM+VF
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390
Query: 404 ------------------------EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ M G +PD TY+L++ C + AN + +
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN 450
Query: 440 EAVRNG 445
+A+ G
Sbjct: 451 DAIAKG 456
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++LI+ +C D K+ EA L +EM G V C L C LC + LD E
Sbjct: 535 NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL-CTLIC--GLCSNGE---LDKAYEL 588
Query: 297 -VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
V ++ EY + FN++I+ C+ A KLF++MG C P+ T+ V+I S
Sbjct: 589 FVTIEKEYK-FSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ + + S G + L LC R+ +A+ + M +G P+
Sbjct: 648 CKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 9/151 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
TL + I L G + F +E++Y F +++ CE S AEKL K
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHK 627
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ PD+ ++I +C G +D A E G +L+C LC
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC---LCV 684
Query: 284 KKDPFRLDSEAEKVLLDMEYNG-VPRNVETF 313
RL SEA ++ M NG VP V +
Sbjct: 685 TH---RL-SEAVVIINLMVQNGIVPEEVNSI 711
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 136/280 (48%), Gaps = 16/280 (5%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN----- 227
L+ +G ++ +++E D DK + ++ LCENGYA+ A ++++D N
Sbjct: 378 LLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEEL 437
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
++F +I +C DG+ +A + + M + G + + YN +++ ++ + D
Sbjct: 438 DVFSYSS----MINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKIND- 492
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
A K+ ++M NG + T+N LI LCK + ++A L M E G P+ T
Sbjct: 493 ------AIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRT 546
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ LI+ L + +V + D + AG + + + LC ++++A ++ +MK
Sbjct: 547 YASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMK 606
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+P+ TY+ LM + +DKA +L+ + NG++
Sbjct: 607 EKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLK 646
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 144/364 (39%), Gaps = 70/364 (19%)
Query: 154 LVDNKEVLGPKTLASCIDRLV----RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L+D G + A C + L+ R G + + +E++ RD G + + +++++ L
Sbjct: 215 LLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGL 274
Query: 210 CENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ G + E + AN D +LI G C G +D A R+ +M + G L
Sbjct: 275 CKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDV 334
Query: 269 VAYNCILDCVSKLCRKKDPFR---------------------------LDSEAEKVLLDM 301
YN ++ ++ R + ++ + SEA ++L +
Sbjct: 335 SVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQL 394
Query: 302 EYNGV--PRNVETFNVLISNL-----------------------------------CKIR 324
E + P V TF LI L CK
Sbjct: 395 ENDASCSPDKV-TFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDG 453
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R+ DA +++ M + GC PN + LI + +++ + ++ M S G Y
Sbjct: 454 RTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYN 513
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ LC E+ ++A S+ ++M G PD TY L+ C +VD A ++DE +
Sbjct: 514 TLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDA 573
Query: 445 GVEV 448
G++V
Sbjct: 574 GLQV 577
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 127/332 (38%), Gaps = 47/332 (14%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLR---LVVEKLCENGYASYA 218
G ++ + +D VRA R + FF + +R +L+ +++ LC G A
Sbjct: 118 GVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRA 177
Query: 219 EKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
L + PD L+ G +LD A L EM G + V YN +L
Sbjct: 178 VSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSG 237
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
C + F +A KV + + G N+ T+ V++ LCK+ R ++A +++ RM
Sbjct: 238 ----CFRTGMFE---KAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRM 290
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER- 395
+ T+ +LI L ++ V + M AG + Y + C + R
Sbjct: 291 MANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRT 350
Query: 396 ---------------------------------IEQAMSVFEKMKTDGH-NPDSETYDLL 421
+ +A + ++++ D +PD T+ L
Sbjct: 351 GEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTL 410
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ C + ++A + ++A +G E+ Y
Sbjct: 411 IHGLCENGYANRAFEILEDARNSGEELDVFSY 442
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 12/198 (6%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR----NVETFNVLIS 318
G G ++N +LD + R D A+ + + R N++T+N+++
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSD-------ADAFFASLSHGAFGRRIAPNLQTYNIILR 166
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
+LC + A+ LF + G P+ T+ L+ L + ++ +++D M + G
Sbjct: 167 SLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQA 226
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y L+ E+AM V+E++ D G +P+ TY +++ C R +A +
Sbjct: 227 DAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEV 286
Query: 438 FDEAVRNGVEVKPKEYRV 455
+ + N + Y +
Sbjct: 287 WSRMMANNHQADTVTYGI 304
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-- 221
T + ID L +A + + E +ER GFK D + ++ LC + A ++
Sbjct: 511 TYNTLIDGLCKAEKYQEASSLTKEMLER--GFKPDIRTYASLIRGLCRDKKVDVALRIWD 568
Query: 222 -VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ D ++ D + ++LI G C GK+DEA + EM V YN ++D +
Sbjct: 569 EILDAGLQV--DVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYE 626
Query: 281 LCRKKDPFRLDSEAE--KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
+ +D A +LD NG+ ++ T+N I LC R+ + + L +
Sbjct: 627 I------GSIDKAASLWTAILD---NGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677
Query: 339 WGCHPNETTFLVLIKSLYQ 357
G P T+ +L++++ +
Sbjct: 678 TGIMPTVITWSILVRAVIK 696
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 9/283 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + + L R GR Q L F+ + D S ++ LC+ G A L +
Sbjct: 11 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 70
Query: 224 D--TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
A P+ + L+ G C +LD A+ + E + F V YN ++ + +L
Sbjct: 71 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQL 130
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R EA M G + +FN +I+ LC+ RR DA+++F M +
Sbjct: 131 GRV-------DEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
HPN T+ V+I L ++ ++ E +++DRM S G Y + R++ A+
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ +M + G PD TY +++ K C RVD A+ +F E V N
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 286
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 8/272 (2%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ L + GR F +M G + + + +V+ LC+ A ++ +
Sbjct: 53 INGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRD 112
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PD + L+ G++DEA +M G+ V++N I ++ LCR +
Sbjct: 113 FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAI---ITGLCRAR--- 166
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL ++A +V +M N+ T++V+I LCK + ++A +L RM GC P+ +
Sbjct: 167 RL-ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAY 225
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ A R+ ++ RM S G Y + +LC + R++ A +F ++
Sbjct: 226 TPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVA 285
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ +P+ TY L+ +C +RVD+ + E
Sbjct: 286 NKCSPNVVTYSALIGGYCRASRVDEGGKVMRE 317
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 12/247 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
L + GR + L F +M + G+ S ++ LC + A ++ + + F P
Sbjct: 127 LFQLGRVDEALATFTQMTEE-GYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP 185
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ ++I G C +LDEA++L M G VAY ++ S RLD
Sbjct: 186 NLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA------AGRLD 239
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A +L M G +V T+ V+I LCK+ R +DA ++F + C PN T+ L
Sbjct: 240 S-ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSAL 298
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I +A+RV EG +++ M + Y + L ++R E+A +F +M G
Sbjct: 299 IGGYCRASRVDEGGKVMREMACRPNVV---TYNTMIWGLSMVDRNEEAYGMFREMSECGF 355
Query: 412 NPDSETY 418
PD+ TY
Sbjct: 356 VPDARTY 362
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF---PDDKICDLLIKGWCVDGKLD 250
G + + + ++++ LC G + A + D + E+ PD LI G C G++D
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHF-DASLELAHAQPDVVSYTTLINGLCKLGRVD 63
Query: 251 EAKRLAREMYR-GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
A L R+M GG YN ++D LC++ RLD+ A V+ + +
Sbjct: 64 AAFDLFRKMVAAGGCRPNAFTYNALVD---GLCKQD---RLDA-ARAVIAEARKRDFAPD 116
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V T+N L++ L ++ R ++A+ F +M E G P +F +I L +A R+ + E+ +
Sbjct: 117 VVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFN 176
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M + Y + LC +++++A + ++M ++G PD Y L+ + A
Sbjct: 177 EMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAG 236
Query: 430 RVDKANALFDEAVRNG 445
R+D A L V G
Sbjct: 237 RLDSALGLLRRMVSQG 252
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 112/282 (39%), Gaps = 55/282 (19%)
Query: 105 NFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK 164
+F+P+ ++ +N + DE L+ FT + + V
Sbjct: 112 DFAPD----VVTYNTLMAALFQLGRVDEALATFTQ--------------MTEEGYVPTLV 153
Query: 165 TLASCIDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+ + I L RA R L F E ++RD F + + +V++ LC++ A++L+
Sbjct: 154 SFNAIITGLCRARRLADALEVFNEMIDRD--FHPNLVTYSVVIDGLCKSDQLDEAQQLLD 211
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+E PD L+ G+ G+LD A L R M G V Y ++D + K+
Sbjct: 212 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVG 271
Query: 283 RKKDPF-----------------------------RLDSEAEKVLLDMEYNGVPRNVETF 313
R D R+D E KV+ +M NV T+
Sbjct: 272 RVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD-EGGKVMREM---ACRPNVVTY 327
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
N +I L + R+E+A +F M E G P+ T+ L ++L
Sbjct: 328 NTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 148/349 (42%), Gaps = 10/349 (2%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
++ T LV L P +G L F +W + ++ T R K F+ +
Sbjct: 72 ISVTSDLVYRVLRSCPNSGTESLRFFNWARSHLSYQPTTLEYEELLKTLARTKQFQPMWK 131
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+ + L P ++S I+ + G Q + F + + + + ++ LCE
Sbjct: 132 -IAHQMQTLSPTVVSSIIEEFGKHGLVDQAVEVFNKAKSALNCPQTIEVYNSLLFALCEV 190
Query: 213 GYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
Y A L++ + + P+ + +L+ GWC GK+ EA+ EM R GF
Sbjct: 191 KYFHGAYALIRRMIRKGVTPNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGR 250
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+ ++D + + L++ A++++ M G +VET N ++ +CK +E I
Sbjct: 251 DLLVDGL------LNAGYLEA-AKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCID 303
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
++ + G PN T+ ++I + + R+ E ++ R G+ Y + LC
Sbjct: 304 IYNDVCRLGVSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALC 363
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR-VDKANALFD 439
+ + A F MK GH P+ Y +L+T R VD AN L +
Sbjct: 364 RNGQFDDAFCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVE 412
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 64/149 (42%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
GV N +T++VL++ C + ++A M G +P +L+ L A +
Sbjct: 207 GVTPNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAA 266
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
EM+ +M G A + L +C E + ++ + G +P+ TY +++
Sbjct: 267 KEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRLGVSPNVGTYKIMIPA 326
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEY 453
C R+D+A + ++ +G P Y
Sbjct: 327 ACKEGRIDEAFRILHRSIEDGHRPFPSLY 355
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ L + ++ + K+ ++M + T +I+ + V + E+ ++ KSA
Sbjct: 116 LLKTLARTKQFQPMWKIAHQMQTL----SPTVVSSIIEEFGKHGLVDQAVEVFNKAKSAL 171
Query: 376 YAIGKKDYY-EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ Y L LC ++ A ++ +M G P+ +TY +L+ WCA ++ +A
Sbjct: 172 NCPQTIEVYNSLLFALCEVKYFHGAYALIRRMIRKGVTPNKQTYSVLVNGWCAAGKMKEA 231
Query: 435 NALFDEAVRNGVE--VKPKEYRVD 456
+E R G V+ ++ VD
Sbjct: 232 QDFLEEMSRKGFNPPVRGRDLLVD 255
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 9/267 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFP 231
L AGR + L F M +D D + +V LC+ G A+ ++++ A P
Sbjct: 102 LCDAGRVVEALEHFRAMAKDCA--PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAP 159
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D LI G C G ++A R+ ++ + G A+ I + +LC K + L
Sbjct: 160 DTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETI---IQRLCNKYNSVEL- 215
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A KVL + G V FN++I+ CK + + A KL M E GC PN TF +L
Sbjct: 216 --ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTIL 273
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A RVGE +++++M G + Y + LC +++ A +F+ M+
Sbjct: 274 ITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 333
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALF 438
P+ T+++L+ C R+++A L+
Sbjct: 334 PPNVVTHNILIDGLCKAKRIEEARQLY 360
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 13/285 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY--AEKLV 222
T ++ ID L + G Q E + + G + ++++LC N Y S A K++
Sbjct: 163 TFSTLIDGLCKFGSEEQAFRVLEDVIQ-RGMGNSDAAFETIIQRLC-NKYNSVELASKVL 220
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ F P + +L+I G+C LD A +L M G + + ++ L
Sbjct: 221 GVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTIL---ITGL 277
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C+ EA+++L M G NV T++ +I+ LCK + +DA +LF M C
Sbjct: 278 CKANRV----GEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 333
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T +LI L +A R+ E ++ RM+ G A Y + LC ++++A
Sbjct: 334 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 393
Query: 402 VFEKMKTDG-HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+F+ + G ++ TY L + A R+ A +F V G
Sbjct: 394 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKG 438
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 44/289 (15%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GF LV+ C+ A KL++ + P+ +LI G C ++ EA
Sbjct: 227 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 286
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++L +M GG V Y+ +++ + K + D + L ME P NV T
Sbjct: 287 QQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL-------FQLMERRNCPPNVVT 339
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
N+LI LCK +R E+A +L++RM E GC P+ T+ LI L ++ +V E ++ +
Sbjct: 340 HNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP 399
Query: 373 SAGYAIGKKDYYEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+G + Y L + R+ A +F + G +PD TY L+ ++C +R
Sbjct: 400 ESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRA 459
Query: 432 -----------------------------------DKANALFDEAVRNG 445
++A LFD G
Sbjct: 460 VEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG 508
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 295 EKVLL--DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E VLL D + V NV + N + LC++ R ++A+ LF C PN+ T+ +LI
Sbjct: 5 ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ A + ++++ MKS+G+ + + LC R+ +A+ F M D
Sbjct: 65 RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCA- 123
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD TY L+ C + D+A + E V G
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQG 156
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 122/305 (40%), Gaps = 47/305 (15%)
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI-FPDDKIC 236
+P VL FF+ G + S ++ LC A L ++ I P+
Sbjct: 3 KPELVLLFFDWARSRVG--HNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTY 60
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+LI+G+ G LD A +L EM GFE V + ++ LC D R+ EA +
Sbjct: 61 GILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLM---KGLC---DAGRV-VEALE 113
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
M + P +V T+ L+ LCK + ++A + M GC P+ TF LI L
Sbjct: 114 HFRAMAKDCAP-DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLC 172
Query: 357 ------QAARV-------GEGDE------MIDRM-----------KSAGYAIGKK----- 381
QA RV G G+ +I R+ K G I K
Sbjct: 173 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 232
Query: 382 -DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + C + ++ A + E M G P+ T+ +L+T C NRV +A L ++
Sbjct: 233 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 292
Query: 441 AVRNG 445
V G
Sbjct: 293 MVMGG 297
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+ L+ +LC++ +++DA +L ++M E G +++ L+ L + R E ++ + M S
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
AG A ++ LC +++ A + ++M G PD ET + L+ +C R D
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADL 674
Query: 434 ANALFDEAVRNGVE 447
A L +E G+E
Sbjct: 675 ARKLLEEMTEAGLE 688
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 14/293 (4%)
Query: 135 SFFTDY--FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
+ F Y GR D I LVD T S I + R +V+ E M
Sbjct: 413 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 472
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDK-ICDLLIKGWCVDGKLDE 251
GF ++L V+ L E + A +L A DD I +L+++G K D+
Sbjct: 473 -GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDK 531
Query: 252 AKRLAREMYRG---GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
A + ++ F + A + +++ + ++ + D A+++L M G
Sbjct: 532 ALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDD-------AKQLLHKMSERGFAA 584
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V ++N L+S L +++R ++A ++F M G P +T V+I L AA+V + E++
Sbjct: 585 AVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELV 644
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
RM G + + C R + A + E+M G P+ T+DLL
Sbjct: 645 QRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 8/298 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D +V+N T + +D + + G L +ME K +
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVI 255
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++G S + L + ++ IFP+ + +I G+C+ G+ A+RL +EM
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V YN +++ K + F EA ++ +M G+ N T+N +I
Sbjct: 316 ERKISPNVVTYNALINAFVK----EGKF---FEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY M GC P+ TF LI A R+ +G E++ M G
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C + + A+ + ++M + G PD T + L+ C + ++ A +F
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 20/289 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM + G + D+ + V+ +C+ G A L++
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVEN-GLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSK 280
+ + I P+ I +I G C DG+ ++ L EM G V YNC++ C+S
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
S A+++L +M + NV T+N LI+ K + +A +L+ M G
Sbjct: 303 RW---------SAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL---CGIERIE 397
PN T+ +I + R+ ++M M + G + D + F T + CG +RI+
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS---PDVFTFTTLIDGYCGAKRID 410
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M + +M G ++ TY+ L+ +C ++ A L + + +GV
Sbjct: 411 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 128/295 (43%), Gaps = 20/295 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID A R + M R G + + ++ C G + A L +
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPR-RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-----------GFELGTVAYN 272
++ + PD C+ L+ G C +GKL +A + + M + G E + YN
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ C + + EAE++ +M + G+ + T++ +I LCK R ++A ++
Sbjct: 514 ILI------CGLINEGKF-LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F MG PN TF LI +A RV +G E+ M G Y +
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ I A+ +F++M + G PD+ T ++T + + +++A A+ ++ R +E
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 14/291 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + + L R ++ L F ++ R D + ++ LC G A L+ +
Sbjct: 153 TFTTLLHGLCLDHRVSEALDLFHQICRP-----DVLTFTTLMNGLCREGRVVEAVALLDR 207
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILDCVSKLC 282
N + PD + G C G A L R+M + V Y+ I+D + K
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R D + + ++M+ G+ N+ T+N +I C R A +L M E
Sbjct: 268 RHSD-------SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ LI + + + E E+ D M G Y + C +R++ A +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
F M T G +PD T+ L+ +C R+D L E R G+ Y
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME + ++ +F +LI C + A+ F ++ + G HP+ TF L+ L R
Sbjct: 107 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDGHNPDSET 417
V E ++ + I + D F T + G+ R+ +A+++ ++M +G PD T
Sbjct: 167 VSEALDLF-------HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQIT 219
Query: 418 YDLLMTKWC 426
Y + C
Sbjct: 220 YGTFVDGMC 228
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 169/397 (42%), Gaps = 50/397 (12%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V T SLV L GF W + H+ T + D G+ ++F + +
Sbjct: 128 VVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWE 187
Query: 153 FLVD---NKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
+ + N+E ++ T++ + RL ++G+ + + F ME+ YG K D ++ +++
Sbjct: 188 LVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMD 247
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
L + +A ++ + I PD + ++LI G+C K D+A+ + M F
Sbjct: 248 ALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPD 307
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V Y V C++ D R++ ++L +M NG NV T+ +++ +L K ++
Sbjct: 308 VVTYTSF---VEAYCKEGDFRRVN----EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVA 360
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A+ ++ +M E GC P+ + LI L + R + E+ + M + G Y +
Sbjct: 361 EALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMI 420
Query: 388 TRLCGIERIEQAMSVFEKMK----------TDGHNP------------------------ 413
+ R E A+ + ++M+ + + P
Sbjct: 421 SAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKN 480
Query: 414 ----DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
D TY LL+ C +V++A F+EAVR G+
Sbjct: 481 DVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGM 517
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 144/317 (45%), Gaps = 10/317 (3%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVL 183
F+H T +F GR + F+ + L + K +L +T + I A + + +
Sbjct: 95 GFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGEKGLLTMETFSIAIKAFAEAKQRKKEV 154
Query: 184 GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGW 243
G F+ M++ YGFK D + +++ L A+ + + + P + +L+ GW
Sbjct: 155 GIFDLMKK-YGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGW 213
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C L EA R+ EM GF VA+N +L+ + K C+KK S+A K+ M+
Sbjct: 214 CRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLK-CKKK------SDAIKLFEIMKA 266
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G NV ++ ++I + CK + +AI+ F M + GC P+ + LI + ++
Sbjct: 267 KGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDM 326
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++ M+ G + Y + + + A+ +++KM G P TY+++M
Sbjct: 327 VYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMK 386
Query: 424 KWCAHNRVDKANALFDE 440
+ + + ++DE
Sbjct: 387 SYFVTKNYEMGHEIWDE 403
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + LI G+ K+D L +EM G YN ++ ++ +
Sbjct: 306 PDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQ-------HM 358
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A ++ M +G+ + T+N+++ + + E +++ M GC P++ +++V
Sbjct: 359 PDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCPDDNSYIV 418
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
I L + R GE + ++ M G K DY +F +
Sbjct: 419 YIGGLIRQDRSGEACKYLEEMLEKGMKALKLDYNKFAS 456
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 8/220 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLD 250
D GF D + +++E L + S A KL + A P+ + ++I+ +C +
Sbjct: 231 DRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMG 290
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA M G + Y C+ ++ R+K ++D +L +M G P +
Sbjct: 291 EAIEYFDVMVDRGCQPDAALYTCL---ITGFGRQK---KMDM-VYSLLKEMRERGCPPDG 343
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N LI + +DA++++ +M + G P T+ +++KS + G E+ D
Sbjct: 344 RTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDE 403
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
M G Y ++ L +R +A E+M G
Sbjct: 404 MHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKG 443
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPF--RLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
R GF + YN ++ CV R+ + +L+ EK LL ME TF++ I
Sbjct: 93 RPGFAHDSRTYNFMM-CVLGRTRQFETMVAKLEEMGEKGLLTME---------TFSIAIK 142
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
+ ++ + + +F M ++G L+ SL A E + +++K +
Sbjct: 143 AFAEAKQRKKEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDR-FTP 201
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ Y L+ C ++ + +A V+ +M G NPD +++++ + A LF
Sbjct: 202 SLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLF 261
Query: 439 D 439
+
Sbjct: 262 E 262
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 134/321 (41%), Gaps = 13/321 (4%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + R+K FK+I L DN L + I+ +G+ + + F++M
Sbjct: 97 TYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKM 156
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDG 247
++YG K + +++ G + KL++ + + P+D+ ++LI+ WC
Sbjct: 157 -KEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKK 215
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
KL+EA + +M G + V YN + R +AE+++L M+YN V
Sbjct: 216 KLEEAWNVLHKMVASGIQPDVVTYN-------TMARAYAQNGETEKAERLILKMQYNKVK 268
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N T ++IS CK +A++ YRM E G HPN F LIK A DE
Sbjct: 269 PNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEA 328
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M+ G + + ++ +F M G PD Y +L +
Sbjct: 329 LTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVR 388
Query: 428 HNRVDKANALFDEAVRNGVEV 448
+ KA +L + GV+
Sbjct: 389 AGQPRKAESLLTSMSKYGVQT 409
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 139/352 (39%), Gaps = 54/352 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVKDTANE 228
++ L+ G+P + F + + G K + +V L + + S L K N
Sbjct: 67 MNALIGKGKPHEAQAVFHNLTEE-GHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + + +I + GK+DEA ++ ++M G + T YN ++ + R +
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESM 185
Query: 289 RLDSEAEKVLLDMEYNGVPRNVE----TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+L +E G NV+ T+N+LI C ++ E+A + ++M G P+
Sbjct: 186 KL----------LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPD 235
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ + ++ Q + + +I +M+ ++ ++ C + +A+
Sbjct: 236 VVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLY 295
Query: 405 KMK---------------------TD--------------GHNPDSETYDLLMTKWCAHN 429
+MK TD G PD T+ +M W +
Sbjct: 296 RMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAG 355
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
+D +F++ V+ G+E Y + K + + +K E+L M++
Sbjct: 356 LMDNCEEIFNDMVKAGIEPDIHAYSI---LAKGYVRAGQPRKAESLLTSMSK 404
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 178/436 (40%), Gaps = 49/436 (11%)
Query: 52 NPKTIDDPDQVIARSLSGELLENL-EADPLPISQRLHLIFSHVTPTPSLVQSTLNFS--P 108
N +T + +AR SG L+ L E P P +++ + L ++ FS
Sbjct: 156 NTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMK 215
Query: 109 EAGRA--ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTL 166
E G ++ FN + DE + RR KA +V+ L
Sbjct: 216 EMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM--RRSGCKA---------DVVTYNAL 264
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
+C + GR G+F M+R+ G + + V+ C+ G A KL
Sbjct: 265 INC---FCKFGRMETAYGYFAAMKRE-GVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK---LC 282
+ ++ LI G C G+LD+A L EM R G L V Y ++D + K +
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380
Query: 283 RKKDPFRL-------------------------DSEAEKVLLDMEYNGVPRNVETFNVLI 317
+D R+ +A +L +M+ G+ ++ + LI
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LC + + ++A L +M E G PN + ++ + +++ +V E M+ ++ +G+
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + LC I++A+S F KM+ G +P+ + Y L+ C + +++A L
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560
Query: 438 FDEAVRNGVEVKPKEY 453
F+E V G+ + Y
Sbjct: 561 FNEMVHKGMSLDKVVY 576
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI+G C KLDEAK L +M G E + Y ++D K K P EA +L
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK--SGKVP-----EAIAML 491
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ +G NV T+ LI LCK ++AI F +M + G PN + L+ L +
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E ++ + M G ++ K Y L + A ++ KM G D Y
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCY 611
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ +C N + +A +F E + +G+
Sbjct: 612 TCFISGFCNLNMMPEAREVFSEMIGHGI 639
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 146/387 (37%), Gaps = 70/387 (18%)
Query: 82 ISQRLHLIFS-HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDY 140
IS RL L+ S P L+ L P A L H L ++ ++H+ LS
Sbjct: 39 ISHRLRLLRSLQSVPADRLLSHPL---PSTAHACLA-AHLLARDRLYAHSRRVLSRLVAL 94
Query: 141 FGRRKDFKA-IHDFLVDNKEVLGPK--TLASCIDRL--VRAGRPTQVLGFFERMERDYGF 195
RR A + D L LGP+ LAS +D L V A R G + R
Sbjct: 95 --RRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADR-----GLLDDAVRAVAR 147
Query: 196 KR------DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGK 248
R + + ++ +L + +L + A +F + + D L C +G+
Sbjct: 148 VRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFL----CKEGE 203
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L EA+ L M G V +N ++D K C + D E E+++ +M +G
Sbjct: 204 LAEARSLFSRMKEMGCLPDVVTFNSLIDGYGK-CGELD------EVEQLVEEMRRSGCKA 256
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+N LI+ CK R E A F M G N TF
Sbjct: 257 DVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTF-------------------- 296
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
F+ C + +AM +F +M+ G + TY L+ C
Sbjct: 297 ---------------STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRV 455
R+D A L DE VR GV + Y V
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 9/264 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLL 239
+ LG M ++ G + D +++ LC A+ L+ K + + P+ I +
Sbjct: 416 KALGLLSEM-KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ GK+ EA + +++ GF+ + Y ++D LC+ S K
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID---GLCKAGSIDEAISHFNK--- 528
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M G+ NV+ + L+ LCK +A++LF M G ++ + L+ +
Sbjct: 529 -MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQG 587
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+ + + +M +G + Y F++ C + + +A VF +M G PD Y+
Sbjct: 588 NLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYN 647
Query: 420 LLMTKWCAHNRVDKANALFDEAVR 443
L++K+ +++A +L DE R
Sbjct: 648 CLISKYQKLGNLEEAISLQDEMER 671
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 154/359 (42%), Gaps = 10/359 (2%)
Query: 99 LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VD 156
LV L +A + F W Q F+H +T + G+ + F+ + L +
Sbjct: 177 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 236
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
KE+L +T C A + +G E M++ Y +K +++ +++ L
Sbjct: 237 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKK-YKYKVGVETINCLLDSLGRAKLGK 295
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A + + P+ + +L+ GWC L EA ++ +M F+ VA+N +L+
Sbjct: 296 EALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLE 355
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ + C+K+ S+A K+ M+ G +V+++ +L+ + CK + ++A++ F M
Sbjct: 356 GLLR-CKKR------SDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEM 408
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
GC P+ + LI R+ ++ MK+ G K Y + +
Sbjct: 409 QGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMP 468
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ A+ +++KM +G P + TY ++M + + A +DE G Y V
Sbjct: 469 DDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTV 527
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 7/202 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD K +L++ +C K+ EA + EM G Y C+ ++ +K R+
Sbjct: 380 PDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCL---ITGFGNQK---RM 433
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+ +L +M+ NG P + +T+N LI + R +DA++++ +M E G P T+ +
Sbjct: 434 DT-VYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSM 492
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++KS +Q G D MK G Y F+ L + R +A E+M G
Sbjct: 493 MMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKG 552
Query: 411 HNPDSETYDLLMTKWCAHNRVD 432
Y+ + R D
Sbjct: 553 MKAPQLDYNKFAADFSRAGRPD 574
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 9/242 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
++ L+R + + + FE M+ G D S ++V C+ A + ++
Sbjct: 354 LEGLLRCKKRSDAIKLFEVMKAK-GPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAG 412
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD I LI G+ ++D L +EM G YN ++ KL K
Sbjct: 413 CRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALI----KLMTNK--- 465
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+ +A ++ M NG+ T+++++ + + R E + + M GC P++ ++
Sbjct: 466 RMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSY 525
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
V I L R E + ++ M G + DY +F R + + +KMK
Sbjct: 526 TVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKF 585
Query: 409 DG 410
G
Sbjct: 586 SG 587
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 11/318 (3%)
Query: 145 KDFKAIHDFLVDNKEVLGPK-TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLR 203
++ K + + +V N ++ + T + I L + G L F + + D GF DK
Sbjct: 357 EEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQ-DKGFHIDKVGYS 415
Query: 204 LVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+V C+ G A+ LV D + PD ++ G+C G++DEAK++ ++MY+
Sbjct: 416 AIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKH 475
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + TV+Y +L+ LC EA +++ E + N T+ ++ L +
Sbjct: 476 GCKPNTVSYTALLN---GLCHSGKSL----EAREMINVSEEHWWTPNAITYGAVMHGLRR 528
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ +A L M E G P +LI+SL Q +V E + ++ + G AI +
Sbjct: 529 EGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVN 588
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + C I +E A+SV + M G +PD+ TY L R+D+A L + +
Sbjct: 589 FTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKML 648
Query: 443 RNGVEVKPKEYR-VDPRY 459
G++ P YR V RY
Sbjct: 649 SKGLDPTPVTYRSVIHRY 666
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 12/308 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D R GR + ++M + +G K + S ++ LC +G + A +++
Sbjct: 448 TYTAIVDGFCRLGRIDEAKKILQQMYK-HGCKPNTVSYTALLNGLCHSGKSLEAREMINV 506
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + + I ++ G +GKL EA L REM GF V N + + LC+
Sbjct: 507 SEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLL---IQSLCQ 563
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA+K L + G NV F +I C+I E A+ + M G HP
Sbjct: 564 NQKVV----EAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHP 619
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ L +L + R+ E E+I +M S G Y + R R++ +++
Sbjct: 620 DAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLL 679
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV-DPRYLKK 462
EKM P Y+ ++ K C +++A L + +R +V V YLKK
Sbjct: 680 EKMLK--RQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKK 737
Query: 463 PIAVKKGK 470
+A+ K
Sbjct: 738 GVAISAYK 745
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 8/203 (3%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A+R+ R M R G E A+ ++ S+ + ++ R VL M+ GV ++
Sbjct: 219 ARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALR-------VLTLMQKAGVEPSLS 271
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
N I L K + E A+K RM G P+ T+ LIK R+ + E+I +
Sbjct: 272 ICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGL 331
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNR 430
S G K YY + LC ++IE+ + EKM + + PD TY+ L+ H
Sbjct: 332 PSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGH 391
Query: 431 VDKANALFDEAVRNGVEVKPKEY 453
D A A EA G + Y
Sbjct: 392 ADDALAFLKEAQDKGFHIDKVGY 414
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P IC+ I GKL++A + M G + V YN ++ L R +D L
Sbjct: 268 PSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALEL 327
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH--PNETTF 348
+ + G P + ++ ++ LCK ++ E+ L +M W + P++ T+
Sbjct: 328 -------IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKM-VWNSNLIPDQVTY 379
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSA---GYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
LI L ++ G D+ + +K A G+ I K Y + C R+++A S+
Sbjct: 380 NTLIHML---SKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVID 436
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
M + G NPD TY ++ +C R+D+A + + ++G + Y
Sbjct: 437 MYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSY 484
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 126/301 (41%), Gaps = 10/301 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
LV+ G+ + L F ERM+ G K D + +++ C+ A +L+ ++ P
Sbjct: 280 LVKGGKLEKALKFLERMQVT-GIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPP 338
Query: 233 DKICDLLIKGW-CVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
DK+ + G+ C + K++E K L +M + V YN ++ +SK D
Sbjct: 339 DKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAF 398
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA+ ++ G ++ ++ + C+ R ++A L M GC+P+ T+
Sbjct: 399 LKEAQDKGFHIDKVG-------YSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTA 451
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++ + R+ E +++ +M G Y L LC + +A + +
Sbjct: 452 IVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHW 511
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
P++ TY +M ++ +A L E V G P E + + L + V + K
Sbjct: 512 WTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAK 571
Query: 471 K 471
K
Sbjct: 572 K 572
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 7/176 (3%)
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y +LD +SK +L A +VL M G+ E F ++ + + + +
Sbjct: 201 VVYYTMLDVLSKT-------KLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRN 253
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+++ M + G P+ + I L + ++ + + ++RM+ G Y +
Sbjct: 254 ALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIK 313
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
C + RIE A+ + + + G PD +Y +M C ++++ L ++ V N
Sbjct: 314 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWN 369
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 138/315 (43%), Gaps = 15/315 (4%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
GR +D A+ + + V + I LV G + + M G D +
Sbjct: 193 LGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL-MGCAADVN 251
Query: 201 SLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEA-KRLARE 258
+ VV LC G+ A +LV + + P L++G C + DEA L R
Sbjct: 252 TFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRV 311
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
L TV C+ + KL R + + + M G P +V T+N+L+
Sbjct: 312 PEVNVVMLNTVIRGCLAE--GKLARATELYEM----------MGSKGCPPDVHTYNILMH 359
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LCK+ R A+++ M E GC PN T+ L+ S + + M+D+M + G+++
Sbjct: 360 GLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSM 419
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ Y + L ++++AM + ++MK+ G PD TY+ ++ C ++++D+A +F
Sbjct: 420 NSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIF 479
Query: 439 DEAVRNGVEVKPKEY 453
+ GV Y
Sbjct: 480 GNLLEEGVVANGITY 494
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GF + ++ L ++G A +LV++ ++ PD + +I C + ++DEA
Sbjct: 416 GFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEA 475
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ + + G + YN ++ + R ++ RL +E M +G P +V +
Sbjct: 476 EHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANE-------MVLHGCPLDVVS 528
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI LCK + ++ L M G PN ++ +LI L +A +V + E+ M
Sbjct: 529 YNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 588
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G Y + LC + A+++ EK+ + +PD TY++L++ C +D
Sbjct: 589 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 648
Query: 433 KANALFDEAVRNGV 446
A+ L D+AV G+
Sbjct: 649 DASMLLDKAVSGGI 662
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLL--DMEYNGVPRNVETFNVLISNLCKIRRSE 327
+YN +L ++ R D A+ +LL M + VP TF V LC++ R+
Sbjct: 147 SYNAVLSTLA---------RADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAR 197
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
DA+ L M GC P+ + +I +L V E ++D M G A + + +
Sbjct: 198 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVV 257
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LCG+ + +A + ++M G P TY L+ C + D+A A+
Sbjct: 258 LGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML 308
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
+ C G+ +A L R M R G V Y + + L + +EA +L +
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTV---IHALVAQGGV----AEAATLLDE 240
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G +V TFN ++ LC + +A +L RM GC P+ T+ L++ L + +
Sbjct: 241 MLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQ 300
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE-RIEQAMSVFEKMKTDGHNPDSETYD 419
E M+ R+ + + R C E ++ +A ++E M + G PD TY+
Sbjct: 301 ADEAYAMLGRVPEVNVVM-----LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYN 355
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNG 445
+LM C R A + DE G
Sbjct: 356 ILMHGLCKLGRCGSAVRMLDEMEEKG 381
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 7/215 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I+G +GKL A L M G YN ++ + KL R R+ E
Sbjct: 322 VIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDE----- 376
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME G N+ T++ L+ + C+ +DA + +M G N + +I +L +
Sbjct: 377 --MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKD 434
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ E ++ MKS G Y + LC +++++A +F + +G + TY
Sbjct: 435 GKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITY 494
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ L+ R + L +E V +G + Y
Sbjct: 495 NTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSY 529
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 148 KAIHDF--LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
+A H F L++ V T + I L+ +GR + L M +G D S +
Sbjct: 474 EAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVL-HGCPLDVVSYNGL 532
Query: 206 VEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ LC+ G + L+++ + I P++ ++LI C GK+ +A L++EM G
Sbjct: 533 IKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL 592
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
V YN + ++ LC+ A +L + V ++ T+N+LIS CK+R
Sbjct: 593 TPDIVTYNTL---INGLCK----VGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVR 645
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+DA L + G PNE T+ +++++
Sbjct: 646 LLDDASMLLDKAVSGGIVPNERTWGMMVQN 675
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 8/298 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D +V+N T + +D + + G L +ME K +
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVI 255
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++G S + L + ++ IFP+ + +I G+C+ G+ A+RL +EM
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V YN +++ K + F EA ++ +M G+ N T+N +I
Sbjct: 316 ERKISPNVVTYNALINAFVK----EGKF---FEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY M GC P+ TF LI A R+ +G E++ M G
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C + + A+ + ++M + G PD T + L+ C + ++ A +F
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 20/289 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM + G + D+ + V+ +C+ G A L++
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVEN-GLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSK 280
+ + I P+ I +I G C DG+ ++ L EM G V YNC++ C+S
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
S A+++L +M + NV T+N LI+ K + +A +L+ M G
Sbjct: 303 RW---------SAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL---CGIERIE 397
PN T+ +I + R+ ++M M + G + D + F T + CG +RI+
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS---PDVFTFTTLIDGYCGAKRID 410
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M + +M G ++ TY+ L+ +C ++ A L + + +GV
Sbjct: 411 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 14/291 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + + L R ++ L F ++ R D + ++ LC G A L+ +
Sbjct: 153 TFTTLLHGLCLDHRVSEALDLFHQICRP-----DVLTFTTLMNGLCREGRVVEAVALLDR 207
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILDCVSKLC 282
N + PD + G C G A L R+M + V Y+ I+D + K
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R D + + ++M+ G+ N+ T+N +I C R A +L M E
Sbjct: 268 RHSD-------SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ LI + + + E E+ D M G Y + C +R++ A +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
F M T G +PD T+ L+ +C R+D L E R G+ Y
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 125/288 (43%), Gaps = 20/288 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID A R + M R G + + ++ C G + A L +
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPR-RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-----------GFELGTVAYN 272
++ + PD C+ L+ G C +GKL +A + + M + G E + YN
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ C + + EAE++ +M + G+ + T++ +I LCK R ++A ++
Sbjct: 514 ILI------CGLINEGKF-LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F MG PN TF LI +A RV +G E+ M G Y +
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ I A+ +F++M + G PD+ T ++T + + +++A A+ ++
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA------------NEIFPDDKICDLLIK 241
G D + +++ LC+NG A ++ K N + PD ++LI
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G +GK EA+ L EM G T+ Y+ ++D LC++ RLD EA ++ + M
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID---GLCKQS---RLD-EATQMFVSM 570
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
NV TFN LI+ CK R +D ++LF MG G + ++ LI + +
Sbjct: 571 GSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNI 630
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++ M S+G LT E +E+A+++ E ++
Sbjct: 631 NGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME + ++ +F +LI C + A+ F ++ + G HP+ TF L+ L R
Sbjct: 107 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDGHNPDSET 417
V E ++ + I + D F T + G+ R+ +A+++ ++M +G PD T
Sbjct: 167 VSEALDLF-------HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQIT 219
Query: 418 YDLLMTKWC 426
Y + C
Sbjct: 220 YGTFVDGMC 228
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 14/321 (4%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFE 187
+T S G+R+D + + L++ E LG K T CI L RAGR + +
Sbjct: 230 KTFSALMVATGKRRDTETVKS-LLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMK 288
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVD 246
RME D G D + ++++ LC G A E VK A+ PD ++ +
Sbjct: 289 RMEDD-GCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDC 347
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G L K EM G+ + + + V+ LC+ + EA +L M GV
Sbjct: 348 GDLGRVKEFWSEMEADGYAPDVITFTIL---VNALCKAGNI----DEAFHLLDVMRKQGV 400
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
N+ T+N LIS L ++ R +DA+ LF M G P T+++ I ++ R + E
Sbjct: 401 LPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALE 460
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++MK G A L L + R+ +A +F ++K++G PDS TY+++M +
Sbjct: 461 TFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYS 520
Query: 427 AHNRVDKANALFDEAVRNGVE 447
+VD+A L + N E
Sbjct: 521 KAGQVDEAIELLSDMSENQCE 541
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 29/249 (11%)
Query: 227 NEIFPDDKICDLLI-KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV--SKLCR 283
N+I D L+I KG + G L + +M GF L +YN ++ + S LCR
Sbjct: 152 NQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCR 211
Query: 284 KKDPF-------------------------RLDSEAEKVLLD-MEYNGVPRNVETFNVLI 317
+ R D+E K LL+ ME G+ N+ T+ + I
Sbjct: 212 EALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICI 271
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
L + R ++A ++ RM + GC P+ T+ VLI +L A ++ + E+ +MK++ +
Sbjct: 272 RVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHK 331
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y L + + + + +M+ DG+ PD T+ +L+ C +D+A L
Sbjct: 332 PDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHL 391
Query: 438 FDEAVRNGV 446
D + GV
Sbjct: 392 LDVMRKQGV 400
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 16/266 (6%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWC 244
F R ++ G K +S ++E A L + N PD +LL+
Sbjct: 777 FIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHG 836
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
GK++E L +M + T+ +N I+ + K S + LD+ Y+
Sbjct: 837 KSGKINELFELYEQMICSSCKPNTITHNIIIANLVK-----------SNSLDKALDLFYD 885
Query: 305 GVPRNVE----TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
V + T+ L+ L K R E+A +LF M ++GC PN + +LI +
Sbjct: 886 LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E+ RM G K Y + LC R++ A+ FEK+K G DS Y+L
Sbjct: 946 VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
++ +R+++A L+DE G+
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGI 1031
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ +++I LD+A L ++ G F Y +LD + K R +
Sbjct: 858 PNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLE----- 912
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA+++ +M G N +N+LI+ K A +LF RM G P+ ++
Sbjct: 913 --EAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTS 970
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ L +A RV + +++K G + Y + L RIE+A++++++M++ G
Sbjct: 971 LVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRG 1030
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
NPD TY+ L+ V++A L++E G+E
Sbjct: 1031 INPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLE 1067
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 9/262 (3%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWC 244
F +M R+ GF + S ++ L ++G A ++ + E + P K L+
Sbjct: 182 FGKM-REAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATG 240
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
+ K L EM G + Y C+ L R R+D EA +++ ME +
Sbjct: 241 KRRDTETVKSLLEEMESLGLKPNIYTYTI---CIRVLGRAG---RID-EACRIMKRMEDD 293
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +V T+ VLI LC + +DA++LF +M P+ T++ ++ +G
Sbjct: 294 GCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRV 353
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E M++ GYA + + LC I++A + + M+ G P+ TY+ L++
Sbjct: 354 KEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISG 413
Query: 425 WCAHNRVDKANALFDEAVRNGV 446
NR+D A LF+ GV
Sbjct: 414 LLRVNRLDDALDLFNNMETLGV 435
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 121/296 (40%), Gaps = 11/296 (3%)
Query: 148 KAIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
+A H V K+ + P T + I L+R R L F ME G + L
Sbjct: 387 EAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMET-LGVVPTAYTYILF 445
Query: 206 VEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ ++G + A E K I P+ C+ + G+L EAK + + G
Sbjct: 446 IDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGL 505
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+V YN ++ C SK + EA ++L DM N ++ N LI+ L K
Sbjct: 506 APDSVTYNMMMKCYSKAGQV-------DEAIELLSDMSENQCEPDIIVINSLINTLYKAG 558
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R ++A K+F R+ + P T+ LI L + +V E+ M G +
Sbjct: 559 RVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFN 618
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
L LC + ++ A+ + KM T PD T++ ++ RV A LF +
Sbjct: 619 TILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQ 674
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 14/248 (5%)
Query: 130 TDETLSFFTDYFGR--RKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGF 185
T T F D++G+ R D KA+ F + P +A + + L GR +
Sbjct: 438 TAYTYILFIDFYGKSGRSD-KALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVI 496
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWC 244
F R++ + G D + ++++ + G A +L+ D + N+ PD + + LI
Sbjct: 497 FNRLKSN-GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
G++DEA ++ + V YN ++ + K + + A ++ M N
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQ-------RAMELFASMTGN 608
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G P N TFN ++ LCK + A+K+ Y+M C P+ TF +I L RV +
Sbjct: 609 GCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDA 668
Query: 365 DEMIDRMK 372
+ +MK
Sbjct: 669 IWLFHQMK 676
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 9/214 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T +D L+++GR + FE M DYG + + +++ + G + A +L
Sbjct: 895 PCTYGPLLDGLLKSGRLEEAKELFEEM-VDYGCRPNNAIYNILINGFGKTGDVNTACELF 953
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
K E I PD K L+ C G++D+A ++ + G L ++AYN ++D + +
Sbjct: 954 KRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRS 1013
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R ++ L E M+ G+ ++ T+N LI NL E A KL+ + G
Sbjct: 1014 HRIEEALTLYDE-------MQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGL 1066
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
PN T+ LI+ + + RM G
Sbjct: 1067 EPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGG 1100
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 9/261 (3%)
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKR 254
+D L +++ LC++ A A+ + E + P + + LI+G+ + A
Sbjct: 752 KDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWN 811
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L EM G YN +LD K + + F L + M + N T N
Sbjct: 812 LFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQ-------MICSSCKPNTITHN 864
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
++I+NL K + A+ LFY + P T+ L+ L ++ R+ E E+ + M
Sbjct: 865 IIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDY 924
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G Y + + A +F++M +G PD ++Y L+ C RVD A
Sbjct: 925 GCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDA 984
Query: 435 NALFDEAVRNGVEVKPKEYRV 455
F++ + G+ + Y +
Sbjct: 985 LHYFEKLKQTGLYLDSIAYNL 1005
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ G G+L+EAK L EM G YN +++ K D + A ++
Sbjct: 901 LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGK---TGDV----NTACELF 953
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G+ +++++ L+ LC+ R +DA+ F ++ + G + + + ++I L ++
Sbjct: 954 KRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRS 1013
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E + D M+S G Y + L +EQA ++E+++ G P+ TY
Sbjct: 1014 HRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTY 1073
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
+ L+ + D A A++ + G
Sbjct: 1074 NALIRGYSMSGNSDSAYAVYKRMMVGG 1100
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
V ET N ++ L RR D + +F M + T+L++ K L+ + +
Sbjct: 120 VVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTP 179
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+M+ AG+ + Y + L +A+ ++ +M +G P +T+ LM
Sbjct: 180 FAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVAT 239
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
+ +L +E G++ Y + R L +
Sbjct: 240 GKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRA 277
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 178/436 (40%), Gaps = 49/436 (11%)
Query: 52 NPKTIDDPDQVIARSLSGELLENL-EADPLPISQRLHLIFSHVTPTPSLVQSTLNFS--P 108
N +T + +AR SG L+ L E P P +++ + L ++ FS
Sbjct: 156 NTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMK 215
Query: 109 EAGRA--ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTL 166
E G ++ FN + DE + RR KA +V+ L
Sbjct: 216 EMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM--RRSGCKA---------DVVTYNAL 264
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
+C + GR G+F M+R+ G + + V+ C+ G A KL
Sbjct: 265 INC---FCKFGRMETAYGYFAAMKRE-GVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK---LC 282
+ ++ LI G C G+LD+A L EM R G L V Y ++D + K +
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380
Query: 283 RKKDPFRL-------------------------DSEAEKVLLDMEYNGVPRNVETFNVLI 317
+D R+ +A +L +M+ G+ ++ + LI
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LC + + ++A L +M E G PN + ++ + +++ +V E M+ ++ +G+
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + LC I++A+S F KM+ G +P+ + Y L+ C + +++A L
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560
Query: 438 FDEAVRNGVEVKPKEY 453
F+E V G+ + Y
Sbjct: 561 FNEMVHKGMSLDKVVY 576
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI+G C KLDEAK L +M G E + Y ++D K K P EA +L
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK--SGKVP-----EAIAML 491
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ +G NV T+ LI LCK ++AI F +M + G PN + L+ L +
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E ++ + M G ++ K Y L + A ++ KM G D Y
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCY 611
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ +C N + +A +F E + +G+
Sbjct: 612 TCFISGFCNLNMMPEAREVFSEMIGHGI 639
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 146/387 (37%), Gaps = 70/387 (18%)
Query: 82 ISQRLHLIFS-HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDY 140
IS RL L+ S P L+ L P A L H L ++ ++H+ LS
Sbjct: 39 ISHRLRLLRSLQSVPADRLLSHPL---PSTAHACLA-AHLLARDRLYAHSRRVLSRLVAL 94
Query: 141 FGRRKDFKA-IHDFLVDNKEVLGPK--TLASCIDRL--VRAGRPTQVLGFFERMERDYGF 195
RR A + D L LGP+ LAS +D L V A R G + R
Sbjct: 95 --RRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADR-----GLLDDAVRAVAR 147
Query: 196 KR------DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGK 248
R + + ++ +L + +L + A +F + + D L C +G+
Sbjct: 148 VRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFL----CKEGE 203
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L EA+ L M G V +N ++D K C + D E E+++ +M +G
Sbjct: 204 LAEARSLFSRMKEMGCLPDVVTFNSLIDGYGK-CGELD------EVEQLVEEMRRSGCKA 256
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+N LI+ CK R E A F M G N TF
Sbjct: 257 DVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTF-------------------- 296
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
F+ C + +AM +F +M+ G + TY L+ C
Sbjct: 297 ---------------STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRV 455
R+D A L DE VR GV + Y V
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 9/264 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLL 239
+ LG M ++ G + D +++ LC A+ L+ K + + P+ I +
Sbjct: 416 KALGLLSEM-KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ GK+ EA + +++ GF+ + Y ++D LC+ S K
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID---GLCKAGSIDEAISHFNK--- 528
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M G+ NV+ + L+ LCK +A++LF M G ++ + L+ +
Sbjct: 529 -MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQG 587
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+ + + +M +G + Y F++ C + + +A VF +M G PD Y+
Sbjct: 588 NLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYN 647
Query: 420 LLMTKWCAHNRVDKANALFDEAVR 443
L++K+ +++A +L DE R
Sbjct: 648 CLISKYQKLGNLEEAISLQDEMER 671
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 191/475 (40%), Gaps = 64/475 (13%)
Query: 24 PQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDD--------------PDQVIARSLSG 69
Q + FS F HY + SK SN + D P + + G
Sbjct: 2 SQMSQFSLFRTLHYSH-------SKFNSNHVDVHDAISSFYRMLRMNPSPSIIEFNKILG 54
Query: 70 ELLE-NLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFS 128
L++ N P+ IS L + +TP+ + +N G F+ L +
Sbjct: 55 SLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFS-VLAKILKMG 113
Query: 129 HTDETLSFFTDYFGRRKDFKA-----IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVL 183
+ +T++ T G + K HD ++ L + I+ L + G L
Sbjct: 114 YHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAAL 173
Query: 184 GFFERME------RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICD 237
+++ + DSL EKL Y Y++ +VK + PD
Sbjct: 174 QVLRKIDGKLVNTNVVMYSTIIDSL--CKEKLVTEAYELYSQMIVKKVS----PDVVTFS 227
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
LI G+C+ G+ EA L EM +N ++D LC++ E + V
Sbjct: 228 ALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD---ALCKEGST----KETKNV 280
Query: 298 LLDM--EYNGVPR---------------NVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
L M E N V + +V ++ ++I LCKI+ ++A+ LF M G
Sbjct: 281 LAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKG 340
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P++ T+ LI L ++ R+ E++D+M + G Y FL LC ++++A+
Sbjct: 341 ITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAV 400
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ +K+K G P+ TY++L+ C R + A +F + + G +V Y +
Sbjct: 401 ALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNI 455
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 26/308 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T ++ I G+ + G F M D + ++V+ LC+ G + ++
Sbjct: 225 TFSALIYGFCMVGQFKEAFGLFHEMVLT-NINPDVCTFNILVDALCKEGSTKETKNVLAV 283
Query: 224 --------DTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ A +F PD ++IK C +DEA L EM G
Sbjct: 284 MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITP 343
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V Y+ ++D LC+ + R+ S A ++L M G P +V T+ + LCK +
Sbjct: 344 DKVTYSSLID---GLCKSE---RI-SHAWELLDQMHARGQPADVITYTSFLHALCKNHQV 396
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+ A+ L ++ + G PN T+ +LI L + R + + GY + Y
Sbjct: 397 DKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIM 456
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LC ++AM++ EKM+ +G PD TY+ ++ ++ KA L E + G+
Sbjct: 457 INGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Query: 447 EVKPKEYR 454
+ E R
Sbjct: 517 LEEKVEIR 524
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 151/351 (43%), Gaps = 14/351 (3%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRL-VRAGRPTQVLG 184
F+H E+L + F + L D + L + R RAG P +
Sbjct: 109 GFTHLPESLLILAGSLAGARLFPLLRSLLSDLPRPALSRDLFPLLFRAYARAGLPDDAIR 168
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWC 244
F MER +GF L ++ L NG +AE +++ + K +LI GW
Sbjct: 169 AFSSMER-FGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPIQFDVSAKTYTILISGWA 227
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
V K ++A++L EM G + AYN ++D LCR D + A++ L DM+ +
Sbjct: 228 VVAKPEKAQKLFDEMIERGVQPDVPAYNALID---ALCRGGD----VALAQEQLKDMQRS 280
Query: 305 -GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ + T+ + + C + + A+++ RM PN T+ +I+ L + V E
Sbjct: 281 RGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDE 340
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+++ M + G Y L C ++ + +A+ + +M P+ +Y++++
Sbjct: 341 AYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCLPNRHSYNMILK 400
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
A RVD+A ++D + G Y V + ++ KKG+ E
Sbjct: 401 MLIAIGRVDRAIEVWDGMEKRGFHPGAATYAV----MIHGLSCKKGRAEEA 447
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 117/285 (41%), Gaps = 23/285 (8%)
Query: 147 FKAIHDFLVDNKEV----------LGPKTLASCIDRLVRAGRPTQVLGFFERM-ERDYGF 195
F H+ LV++ E + KT I +P + F+ M ER G
Sbjct: 190 FTLSHNGLVEHAEAFFRESPIQFDVSAKTYTILISGWAVVAKPEKAQKLFDEMIER--GV 247
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAK 253
+ D + +++ LC G + A++ +KD + + PD ++ C A
Sbjct: 248 QPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAAL 307
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
R+ M YN ++ + +L EA +L +M G +V ++
Sbjct: 308 RVLDRMRARSLTPNVFTYNAVIRLLCELGEV-------DEAYNILNEMATYGEKPDVWSY 360
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N L++ CK++ A++L RM E C PN ++ +++K L RV E+ D M+
Sbjct: 361 NTLLNTHCKLKEVNKALRLISRMDEGLCLPNRHSYNMILKMLIAIGRVDRAIEVWDGMEK 420
Query: 374 AGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSET 417
G+ G Y + L C R E+A S F +M DG P T
Sbjct: 421 RGFHPGAATYAVMIHGLSCKKGRAEEACSYFLRMVDDGIPPYQAT 465
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 30/233 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
ID L R G + M+R G D + + C + A A +++ + A
Sbjct: 258 IDALCRGGDVALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARS 317
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ + +I+ C G++DEA + EM G + +YN +L+ KL
Sbjct: 318 LTPNVFTYNAVIRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKAL 377
Query: 289 RLDSEAEKVLL----------------------------DMEYNGVPRNVETFNVLISNL 320
RL S ++ L ME G T+ V+I L
Sbjct: 378 RLISRMDEGLCLPNRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGL 437
Query: 321 -CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
CK R+E+A F RM + G P + T VL L + + + + DRM+
Sbjct: 438 SCKKGRAEEACSYFLRMVDDGIPPYQATCQVLRDRLLRLGLRDDLEMLTDRMR 490
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 24/310 (7%)
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
VLG K +S ID L RA R +V + +M + G + D +++ CE G YA
Sbjct: 303 VLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKA-GIEPDVVLYTILIRGFCEVGMVDYAL 361
Query: 220 KLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
++ D T + PD + LIKG+C G LD+A+ L E+ + + Y IL C
Sbjct: 362 NMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYT-ILIC- 419
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
+CR L EA ++ ME G ++ TFN LI LCK E+A LFY+M E
Sbjct: 420 -GMCRNG----LLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-E 473
Query: 339 WGCHP--------------NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
G +P + + +++ L ++ + + +++ ++ +G Y
Sbjct: 474 IGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYN 533
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ C + I A +F +++ GH+PDS TY L+ + +R + A + D+ V+N
Sbjct: 534 VLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKN 593
Query: 445 GVEVKPKEYR 454
G Y+
Sbjct: 594 GCTPSSAVYK 603
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 154/352 (43%), Gaps = 22/352 (6%)
Query: 104 LNFSPEAGRAILGF----NHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE 159
+N SP+ R++L F + + +AN T + + + + + D L E
Sbjct: 1 MNLSPQICRSVLHFIPKQSRFRCLHANLFTTAQGAAISNEVLTVMETVNPMEDAL----E 56
Query: 160 VLGPKTLASCIDRLVRAGR-PTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASY 217
L P + ++ ++R R P FF R F R + LV++ L ++G+ +Y
Sbjct: 57 KLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDTY 115
Query: 218 AEKL--VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
+ L +K++ +I P +LI + G ++A +M G + YN IL
Sbjct: 116 WKILEELKNSNIQIPP--PTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSIL 173
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ + K+ F L +L + YN N TF +L++ LCK +++DA+K+F
Sbjct: 174 HVMVQ----KEVFLLALAVYNQMLKLNYN---PNRATFVILLNGLCKNGKTDDALKMFDE 226
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M + G PN + +++ L QA R + +++ MK +G L C + +
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQ 286
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
I++A ++ + + +G+ + Y L+ R D+ + + G+E
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 129/304 (42%), Gaps = 19/304 (6%)
Query: 138 TDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
+ FG+ KDF D N S + +V+ L + +M + +
Sbjct: 151 VESFGKMKDFGCKPDVFTYN----------SILHVMVQKEVFLLALAVYNQMLK-LNYNP 199
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
++ + +++ LC+NG A K+ + T I P+ I +++ G C + D+ RL
Sbjct: 200 NRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLL 259
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M G ++ N +LD KL + + F L EK G ++ ++ L
Sbjct: 260 NTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEK-------EGYVLGIKGYSSL 312
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I L + +R ++ + +M + G P+ + +LI+ + V M++ M G
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + C + +++A S+ ++ + P S TY +L+ C + +D+A
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQ 432
Query: 437 LFDE 440
+F++
Sbjct: 433 IFNQ 436
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 138/329 (41%), Gaps = 26/329 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERME----------RDYGFKR--DKDSLRLVVEKLCEN 212
T + ID L +AG + F +ME G R D SL+ +VE+LCE+
Sbjct: 448 TFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCES 507
Query: 213 GYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G A KL+ A+ + PD ++LI G+C ++ A +L RE+ G +V Y
Sbjct: 508 GLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTY 567
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
++D ++ R++D FR VL M NG + + L++ C+ + A
Sbjct: 568 GTLIDGFHRVDREEDAFR-------VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFS 620
Query: 332 LFYR-MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
L+ + + +ET L L + ++ + + + M Y +L L
Sbjct: 621 LWLKYLRSLPSQEDET--LKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGL 678
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C R E+A+ +F +K + + + +L+ C ++ A +F + G + P
Sbjct: 679 CQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMP 738
Query: 451 KEYRVDPRYLKKPIAVKKGKKRETLPEKM 479
R+ + L+ I K K L +M
Sbjct: 739 ---RICNQLLRSLILQDKMKHALDLLNRM 764
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 42/220 (19%)
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V +N ++D ++K D F K+L +++ + + TF+VLI+ K +E
Sbjct: 97 VTHNLVIDMLAK----DDGF---DTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEK 149
Query: 329 AIKLFYRMGEWGC-----------------------------------HPNETTFLVLIK 353
A++ F +M ++GC +PN TF++L+
Sbjct: 150 AVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLN 209
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L + + + +M D M G Y L+ LC +R + + MK G P
Sbjct: 210 GLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCP 269
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
DS T + L+ +C ++D+A AL + G + K Y
Sbjct: 270 DSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGY 309
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 87 HLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANF-SHTDETLSFFTDYFGRRK 145
++ + TP+ ++ + + +S G+ + F+ WL + S DETL ++F + +
Sbjct: 589 QMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGE 648
Query: 146 DFKAIH-----DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
KA+ +F ++N E+ P T+ + L +A R + L F + ++ +
Sbjct: 649 LEKAVRCLLEMNFKLNNFEI-APYTIW--LIGLCQARRSEEALKIFLVL-KECQMDVNPP 704
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREM 259
S +++ LC++G A + T + F +IC+ L++ + K+ A L M
Sbjct: 705 SCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 764
Query: 260 YRGGFEL 266
G++L
Sbjct: 765 NSAGYDL 771
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 8/255 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLD 250
D G + D + ++++ LC+ G A+KL+ I PD + LI+G+C+ G L+
Sbjct: 278 DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN 337
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
A+ L M G E ++YN +++ SK + ++ +L +E M G NV
Sbjct: 338 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE-------MLLVGKRPNV 390
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T++ L+ + + +DA KLF M G N T+ + + L + + E ++
Sbjct: 391 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 450
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+KS+ + + ++ + LC ++E A +FEK+ +GH P+ TY +++ +C +
Sbjct: 451 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 510
Query: 431 VDKANALFDEAVRNG 445
VDKAN L + NG
Sbjct: 511 VDKANVLIQKMEANG 525
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 11/307 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-----NGYASYAEKLVKD 224
+ L + +QV + +M R G D+ +L +++ LC G+A++A L +
Sbjct: 76 LSGLAKIKHYSQVFSLYNQM-RLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRG 134
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ P+ + LIKG C++ ++ EA RL M + G V Y ++ +
Sbjct: 135 YS----PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNI 190
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+L E + E N P NV T+N+++ LCK+ R ++A +LF M G P+
Sbjct: 191 NIALKLHQEMLNDISRYEINCKP-NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPS 249
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
++ LI A + E ++D M G + + LC ++ +A +
Sbjct: 250 IISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 309
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI 464
M G PD TY+ L+ +C ++ A LF G E Y V K +
Sbjct: 310 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 369
Query: 465 AVKKGKK 471
V++ K
Sbjct: 370 KVEEAMK 376
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++ +FN L+S L KI+ L+ +M G + T +L+ L R+ EG
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ GY+ Y + LC RI +A +F +M+ G PD TY L+ C
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
++ A L E + ++ E P + I V
Sbjct: 188 GNINIALKLHQEMLN---DISRYEINCKPNVITYNIIV 222
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 9/207 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + + AG+ F M + +G + + + ++ LC+N A KL +
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVM-KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 450
Query: 225 TANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ F + + + LI G C GKL+ A L ++ G E V Y + + CR
Sbjct: 451 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM---IHGFCR 507
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +A ++ ME NG ++ T+N L+ + + E+ ++L +RM + P
Sbjct: 508 EGQV----DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 563
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDR 370
+ T +++ L + + E ++ R
Sbjct: 564 DAITCSIVVDMLSKDEKYQECLHLLPR 590
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 52/110 (47%)
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+ F+ M P+ ++F L+ L + + + ++M+ +G + + L
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LC + R+ + + F + G++P+ TY+ L+ C +R+ +A LF
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 8/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
V+ LC+ G S A ++V+D + + D + ++ G+C G L A+ EM + G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
V Y + ++ LCR + EAE+VL +ME G+ + T+ VLI CK+
Sbjct: 386 LAADGVTYTAL---INGLCRAGEL----KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A + +M + PN T+ L L + V +E++ M S G + Y
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC +EQAM M G PD TY ++ C +D+A++L E +
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558
Query: 444 NGVEVKPKEYRV 455
G++ Y V
Sbjct: 559 KGIKPTIVTYNV 570
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 133/312 (42%), Gaps = 11/312 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ D + + +V + VL + + R G +F+ M++ G D +
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR-GLAADGVT 392
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ LC G AE+++++ ++ D + +LI G+C GK+ EA + +M
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ V Y + D LC++ D A ++L +M G+ N+ T+N LI+ L
Sbjct: 453 QKRVTPNVVTYTALSD---GLCKQGDV----CAANELLHEMCSKGLELNIFTYNSLINGL 505
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK E A++ M E G P+ T+ +I +L Q+ + ++ M G
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C R+E + E M +P++ TY+ LM ++C + ++
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 441 AVRNGVEVKPKE 452
+ EV P E
Sbjct: 626 MLSQ--EVVPNE 635
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 18/323 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T + I+ L RAG + + ME D G D + ++++ C+ G + A K
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEME-DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+V+ + P+ L G C G + A L EM G EL YN + ++
Sbjct: 451 MVQ---KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL---ING 504
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+ + +A + ++DM+ G+ +V T+ +I LC+ + + A L M + G
Sbjct: 505 LCKAGNL----EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P T+ VL+ + RV G +++ M Y + + C + ++
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
+++ M + P+ TY++L+ C + +A E + G + Y R L
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680
Query: 461 KKPIAVKKGKKRETLPEKMARKR 483
K KK + L EKM ++R
Sbjct: 681 NKK---KKFTEARRLFEKMRKER 700
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 44/251 (17%)
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+++ S ++++ LC G A +L + A+ PD +++ G+C +L+ A +L
Sbjct: 250 EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP--PDVVTYGIMVHGYCTLSELETAIKL 307
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
EM G EL VAY + ++ LC + S+A +V+ DM +GV + F
Sbjct: 308 LSEMAARGLELNPVAYTSV---IALLCDEGQV----SDAVRVVEDMVMHGVVLDAAVFTT 360
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
++S C R G+ AAR D M+ G
Sbjct: 361 VMSGFC-------------RKGDLA-----------------AAR-----NWFDEMQKRG 385
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
A Y + LC +++A V ++M+ G + D+ TY +L+ +C ++ +A
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445
Query: 436 ALFDEAVRNGV 446
+ ++ V+ V
Sbjct: 446 LVHNKMVQKRV 456
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID L + G L F ME G K D + ++ LC +G K++++
Sbjct: 281 IDSLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI + +GKL EAK L EM G T+ YN ++D C++
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID---GFCKEN--- 393
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA ++ M G ++ T+++LI++ CK +R +D ++LF + G PN T+
Sbjct: 394 -CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 452
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ Q+ ++ E+ M S G Y L LC + +A+ +FEKM+
Sbjct: 453 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 512
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y++++ C ++VD A +LF GV+ Y V
Sbjct: 513 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 559
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 13/306 (4%)
Query: 133 TLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T S D F G+ + K +++ ++ T S ID + + F+ M
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
G + D + +++ C+ +L ++ +++ + P+ + L+ G+C GK
Sbjct: 406 VSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L+ AK L +EM G V Y +LD LC + ++A ++ M+ + +
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLD---GLCDNGEL----NKALEIFEKMQKSRMTL 517
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+ +N++I +C + +DA LF + + G P+ T+ V+I L + + E D +
Sbjct: 518 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 577
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+MK G Y + G + ++ + E+MK G + DS T +++ +
Sbjct: 578 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI-DMLSD 636
Query: 429 NRVDKA 434
R+DK+
Sbjct: 637 RRLDKS 642
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 25/218 (11%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD---PFRLDSEAE 295
L+ G+C K E + +MY T+ NC CRKK F + A
Sbjct: 117 LVLGFC---KGMELNGIEHDMYTM-----TIMINC-------YCRKKKLLFAFSVLGRAW 161
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
K+ G + TF+ L++ C R +A+ L RM E P+ T LI L
Sbjct: 162 KL-------GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 214
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
RV E +IDRM G+ + Y L RLC A+ +F KM+
Sbjct: 215 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 274
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
Y +++ C D A +LF+E G++ Y
Sbjct: 275 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 312
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 126/312 (40%), Gaps = 48/312 (15%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLI 240
VLGF + ME + G + D ++ +++ C +A ++ + PD L+
Sbjct: 118 VLGFCKGMELN-GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 176
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G+C++G++ EA L M V + + ++ LC K SEA VL+D
Sbjct: 177 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL---INGLCLKGRV----SEA-LVLID 228
Query: 301 --MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+EY P V T+ +++ LCK S A+ LF +M E + + ++I SL +
Sbjct: 229 RMVEYGFQPDEV-TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 287
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG--------------IER--------- 395
+ + + M+ G Y + LC I R
Sbjct: 288 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 347
Query: 396 ------------IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ +A ++ +M T G PD+ TY+ L+ +C N + +AN +FD V
Sbjct: 348 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 407
Query: 444 NGVEVKPKEYRV 455
G E Y +
Sbjct: 408 KGCEPDIVTYSI 419
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 132/297 (44%), Gaps = 9/297 (3%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
HD +V + + + ++ L + G + F RM D + +++ LC
Sbjct: 145 HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFL-RMIEDSSTGLNVVMYNTIIDGLC 203
Query: 211 ENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
++ + A + A IFP+ LI G+C+ G+L A L EM
Sbjct: 204 KDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVY 263
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
Y ++D + K + K EA+ +L +M Y G P +V T+ L+ CK + + A
Sbjct: 264 TYAILIDALCKEGKVK-------EAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKA 316
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
LF +M EWG PN+ T+ LI L + R+ + ++ + G I Y +
Sbjct: 317 TALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGG 376
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC +++A+++ KM+ +G P+ T+++++ + DKA L E + G+
Sbjct: 377 LCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 12/291 (4%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L +C L + VLG ++ G++ + +L +++ LC G +
Sbjct: 93 LINCFCHLGQMSFSFSVLGKILKL----GYQPNTITLTTLMKGLCLKGEVQKSVHFHDKV 148
Query: 226 ANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ F +++ L+ G C G+ A + R + L V YN I+D LC+
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIID---GLCKD 205
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
K L +EA +M G+ NV T+ LI C + A L M +PN
Sbjct: 206 K----LVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPN 261
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ +LI +L + +V E ++ M G Y L C + +++A ++F
Sbjct: 262 VYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFM 321
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
KMK G P+ TY L+ C R+ A LF + + G + Y V
Sbjct: 322 KMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNV 372
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ N+ T N+LI+ C + + + + ++ + G PN T L+K L
Sbjct: 78 MEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGE 137
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + D++ + G+ + + Y L LC I A+ ++ + Y+
Sbjct: 138 VQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNT 197
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
++ C V++A + E G+
Sbjct: 198 IIDGLCKDKLVNEAYDFYSEMNARGI 223
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 7/219 (3%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L+++M G E V N +++C L + F + + K+ G N
Sbjct: 71 AISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKL-------GYQPNTI 123
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T L+ LC + ++ ++ G N+ ++ L+ L + + + +
Sbjct: 124 TLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMI 183
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ + + Y + LC + + +A + +M G P+ TY L+ +C ++
Sbjct: 184 EDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQL 243
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
A +L +E + + Y + L K VK+ K
Sbjct: 244 TGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAK 282
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + + V+ LC G S A ++++D T + + D + +I G+C G L A
Sbjct: 317 GLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAA 376
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+RL EM + G V + + ++ LCR + EA++VL +M G+ +V T
Sbjct: 377 RRLFEEMQKRGLAADRVTHTAL---INGLCRAGEL----KEADRVLQEMVDKGLDVDVVT 429
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ VLI CK +A ++ M PN T+ L L + V +E++ M
Sbjct: 430 YTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMC 489
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G + Y + LC +EQAM + +M+ GH D TY L+ C D
Sbjct: 490 NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFD 549
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
+A+ + E + G++ Y V
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNV 572
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 123/299 (41%), Gaps = 9/299 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ L RAG + + M D G D + ++++ C+ G A ++ +
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMV-DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNE 452
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ L G C G + A L EM G EL YN + ++ LC+
Sbjct: 453 MVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSL---INGLCK 509
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
F +A +++ +ME G +V T+ LI LCK + A + M + G P
Sbjct: 510 ----FGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKP 565
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ VL+ + RV G ++++ M Y + + C + ++ ++
Sbjct: 566 SIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIY 625
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+ M + P+ TY++L+ C + +A E + G+ + Y R L K
Sbjct: 626 KGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNK 684
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVD--NKEV-LGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + +D ++ D +A ++ L + NK + L T S I+ L + G Q + M
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
E G + D + +++ LC++G A ++++ ++ I P ++L+ G+C+ G+
Sbjct: 524 EAA-GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGR 582
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
++ K+L M V YN ++ + C K+ + S E + M V
Sbjct: 583 VEGGKKLLEWMLEKNVRPNVVTYNSLM---KQYCIDKN---MKSTTE-IYKGMHSQEVAP 635
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N T+N+LI CK R ++A+ M E G +++ LI+ L + + E
Sbjct: 636 NENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFF 695
Query: 369 DRMKSAGYAIGKKDYYEF 386
D+M++ G + D Y F
Sbjct: 696 DKMRNEGLT-AEPDVYSF 712
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 8/248 (3%)
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LC+ G A +L+ + N+ + + LI G C G L++A R+ EM G
Sbjct: 470 DGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHR 529
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
Y ++D LC+ + R A +L +M G+ ++ T+NVL++ C R
Sbjct: 530 TDVYTYTTLID---TLCKSGEFDR----AHNMLQEMLDKGIKPSIATYNVLMNGFCMSGR 582
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
E KL M E PN T+ L+K + E+ M S A + Y
Sbjct: 583 VEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNI 642
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ C +++A+ ++M G + +Y L+ + +A FD+ G
Sbjct: 643 LIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEG 702
Query: 446 VEVKPKEY 453
+ +P Y
Sbjct: 703 LTAEPDVY 710
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++ G+CV G+L+ A +L EM G E Y + ++ LC K
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSV---IALLCNKGQV--- 338
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
S+A +VL DM +GV + F +IS C A +LF M + G + T
Sbjct: 339 -SDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTA 397
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI L R GE +++A V ++M G
Sbjct: 398 LINGL---CRAGE--------------------------------LKEADRVLQEMVDKG 422
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+ D TY +L+ +C + +A + +E V G V P
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMV--GRRVAP 460
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
+NV + N+L+ L R +DA + F E P+ T+ ++ + ++
Sbjct: 253 KNVCSHNILLKALLSAGRLKDACQHF---DEMSSPPDVVTYGTMVHGYCVRGELENAVKL 309
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+D M + G Y + LC ++ A+ V E M G D+ + +++ +C+
Sbjct: 310 LDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCS 369
Query: 428 HNRVDKANALFDEAVRNGV 446
+ A LF+E + G+
Sbjct: 370 KGDLAAARRLFEEMQKRGL 388
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 126/279 (45%), Gaps = 12/279 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
ID + G L F RMERD G + D + +V LC +G S A +L++D +
Sbjct: 181 IDGFCKTGLVNNALVLFGRMERD-GVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRD 239
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ LI + +GK EAK+ EM R + YN + + LC
Sbjct: 240 IVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSM---IHGLCMHGQV- 295
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA+++L M G +V T+N LI+ CK +R ++ KL M + G + TF
Sbjct: 296 ---DEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTF 352
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I+ +QA R E+ RM G + Y L LC R+E+A+ +FE M+
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQK 409
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
D TY++++ C V+ A LF G+E
Sbjct: 410 SEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLE 448
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 111/273 (40%), Gaps = 9/273 (3%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLI 240
V+ F ME G D + +V+ LC A +V + PD LI
Sbjct: 88 VISLFHNMEI-CGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI 146
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G+C ++ A L +M +L V YN I+D C+ L + A +
Sbjct: 147 NGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIID---GFCKTG----LVNNALVLFGR 199
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME +GV + T+N L++ LC R DA +L M PN TF LI + + +
Sbjct: 200 MERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGK 259
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E + + M Y + LC ++++A + + M T G PD TY+
Sbjct: 260 FLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNT 319
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
L+ +C RVD+ L E + G+ V +
Sbjct: 320 LINGFCKTKRVDEGTKLVREMSQRGLVVDTVTF 352
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 47/306 (15%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GRR D + +V V T + I+ VR G+ + F+E M R D +
Sbjct: 223 GRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRR-CIDPDVFT 281
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC +G A++++ + FPD + LI G+C ++DE +L REM
Sbjct: 282 YNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMS 341
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ G + TV +N I+ + R A+++ M G N+ T+++L+ L
Sbjct: 342 QRGLVVDTVTFNTIIQGYFQAGRP-------DAAQEIFSRM---GSRPNIRTYSILLYGL 391
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C R E A+ LF M + + TT+ ++I
Sbjct: 392 CYNWRVEKALVLFESMQKSEMELDITTYNIVIHG-------------------------- 425
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+C I +E A +F + G PD TY +++ +C DKA+ L+ +
Sbjct: 426 ---------MCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRK 476
Query: 441 AVRNGV 446
+G+
Sbjct: 477 MQEDGL 482
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P VE F+ L+SN+ K + + I LF+ M G + T+ ++I L + +R
Sbjct: 66 LPSIVE-FSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIAL 124
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ +M GY + C R+ A+ + KM+ D Y+ ++ +
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGF 184
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEY 453
C V+ A LF R+GV Y
Sbjct: 185 CKTGLVNNALVLFGRMERDGVRADTVTY 212
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 10/299 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L + G L F + E D GF DK +V C+ G A+ LV D
Sbjct: 374 TYNTLIHMLSKHGHADDALAFLKEAE-DKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVID 432
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD ++ G+C G++DEAK++ ++MY+ G + TV+Y +L+ LC
Sbjct: 433 MYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLN---GLCH 489
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
EA +++ E + N T+ V++ + + +A L M E G P
Sbjct: 490 SGKSL----EAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFP 545
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+LI+SL Q +V E + ++ + G AI ++ + C I +E A+SV
Sbjct: 546 TPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVL 605
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR-VDPRYLK 461
E M +PD+ TY L R+D+A L + + G++ P +R V RY +
Sbjct: 606 EDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQ 664
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 145/382 (37%), Gaps = 66/382 (17%)
Query: 105 NFSPEAGRAILGFNHWLTQNANFSHT----------DETLSFFTDYFGRR-KDFKAIHDF 153
NF+ + G+ GF L+ A+ S DE+L F + G K + I
Sbjct: 62 NFNDDLGKVGPGFQESLSFAASVSDGAEEEEGSSDDDESLEFINSFHGSNDKQTQNIASI 121
Query: 154 LVDNKEVLGPKTLASC----------------IDRLVRAGRPTQVLGFF-----ERMERD 192
+D+ E P C + L+R+ +P+ V ER+ +
Sbjct: 122 EIDDSEFRHPVVREVCRLITLSSAWNPNFEGRLRHLLRSLKPSLVCAVLRSQADERVALN 181
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
+ + D+ + LV T ++ K+C A
Sbjct: 182 FFYWADRQ-------------WRYSHHPLVYYTLLDVLSKTKLCQ-------------GA 215
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+R+ R M R G EL A+ C++ S+ + ++ R VL M+ GV N+
Sbjct: 216 RRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALR-------VLTLMQKAGVEPNLSI 268
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
N I L K + E A++ RM G P+ T+ LIK R+ + E+I +
Sbjct: 269 CNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLP 328
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNRV 431
S G K YY + LC ++IEQ + EKM D + PD TY+ L+ H
Sbjct: 329 SKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHA 388
Query: 432 DKANALFDEAVRNGVEVKPKEY 453
D A A EA G + Y
Sbjct: 389 DDALAFLKEAEDKGFHIDKVGY 410
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 167/401 (41%), Gaps = 30/401 (7%)
Query: 74 NLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAI--LGFNHWLTQNANFSHTD 131
NL D + + +H++ H +L + L + + G I +G++ + D
Sbjct: 367 NLIPDQVTYNTLIHMLSKHGHADDAL--AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMD 424
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMER 191
E S D + R N +V+ T + +D R GR + ++M +
Sbjct: 425 EAKSLVIDMYSRSC-----------NPDVV---TYTAIVDGFCRLGRIDEAKKMLQQMYK 470
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLD 250
+G K + S ++ LC +G + A +++ + + + I +++ G+ +GKL
Sbjct: 471 -HGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLS 529
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA L REM GF V N + + LC+ + EA+K L + G NV
Sbjct: 530 EACDLTREMVEKGFFPTPVEINLL---IQSLCQNQKVV----EAKKYLEECLNKGCAINV 582
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
F +I C+I E A+ + M HP+ T+ L +L + R+ E E+I +
Sbjct: 583 VNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVK 642
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M S G + + R C R++ +++ ++M P Y+ ++ K C
Sbjct: 643 MLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVK--RKPFRTIYNHVIEKLCDFGN 700
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV-DPRYLKKPIAVKKGK 470
+++A L + +R ++ V LKK +A+ K
Sbjct: 701 LEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYK 741
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 127/301 (42%), Gaps = 10/301 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
LV+ + + L F ERM+ G K D + +++ C+ A +L+ ++ P
Sbjct: 276 LVKGCKLEKALRFLERMQVT-GIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPP 334
Query: 233 DKICDLLIKGW-CVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCRKKDPFRL 290
DK+ + G+ C + K+++ K L +M + + V YN ++ +SK D
Sbjct: 335 DKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAF 394
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EAE ++ G ++ ++ + C+ R ++A L M C+P+ T+
Sbjct: 395 LKEAEDKGFHIDKVG-------YSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTA 447
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++ + R+ E +M+ +M G Y L LC + +A + +
Sbjct: 448 IVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHW 507
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
P++ TY ++M + ++ +A L E V G P E + + L + V + K
Sbjct: 508 WTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAK 567
Query: 471 K 471
K
Sbjct: 568 K 568
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 14/227 (6%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ IC+ I KL++A R M G + V YN ++ L R +D L
Sbjct: 264 PNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALEL 323
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM-GEWGCHPNETTFL 349
+ + G P + ++ ++ LCK ++ E L +M + P++ T+
Sbjct: 324 -------IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSA---GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
LI L ++ G D+ + +K A G+ I K Y + C R+++A S+ M
Sbjct: 377 TLIHML---SKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDM 433
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ NPD TY ++ +C R+D+A + + ++G + Y
Sbjct: 434 YSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSY 480
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRG 262
++++ LC+ G A +L+ + + D + LI G+C G LD K L EM
Sbjct: 50 ILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEK 109
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G V Y+C+ ++ C+K L EA VL M G+ +V T+ +I LCK
Sbjct: 110 GISPNVVVYSCL---INGFCKKG----LWREATAVLHTMTERGIQPDVYTYTCMIGGLCK 162
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
R+ A+ LF M E G P+ T+ VLI L + +G+ ++ + M G +
Sbjct: 163 DGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS 222
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGH--NPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC ++++AM +F + DG+ PD T++ ++ C R+DKA ++D
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDT 282
Query: 441 AVRNG 445
+ G
Sbjct: 283 MIERG 287
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 32/336 (9%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + + D + + E T I+ L + G FE M + G + + S
Sbjct: 164 GRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETM-LEKGKRLEVVS 222
Query: 202 LRLVVEKLCENGYASYAEKLVK---DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
++ LC NG A KL + N + PD + +I+G C +G+LD+A +
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDT 282
Query: 259 MY-RGGFE--------LGTVAYNCILDCVSKLCRKKDPFRL--DSEAEKVLLD------- 300
M RG F +G + I+D +L ++ L S V++D
Sbjct: 283 MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHM 342
Query: 301 ----------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
M+ +G+ + +N L+++LCK E A +LF M E C P+ +F +
Sbjct: 343 LNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNI 402
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I +A + E+++ M+ G Y F+ RL + ++E+A F+ M G
Sbjct: 403 MIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG 462
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD+ YD L+ + ++ +++ L + GV
Sbjct: 463 ITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 10/255 (3%)
Query: 198 DKDSLRLVVEKLC-ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D S ++ LC E + LV+ + P+ +L+ G C +G+++EA RL
Sbjct: 9 DIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLL 68
Query: 257 REMYRGGFELGTVAYNCILDC-VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
EM R G E+ V Y+ ++ SK C + D EK G+ NV ++
Sbjct: 69 GEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEK--------GISPNVVVYSC 120
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI+ CK +A + + M E G P+ T+ +I L + R + ++ D M G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC I A +FE M G + +Y+ L+ C + ++D+A
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 436 ALFDEAVRNGVEVKP 450
LF + +G V+P
Sbjct: 241 KLFSSLLEDGNYVEP 255
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 14/259 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLD 250
G + D + ++ LC++G A A L + + E P ++LI G C +G +
Sbjct: 145 GIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEE--PSTVTYNVLINGLCKEGCIG 202
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG--VPR 308
+A ++ M G L V+YN + + LC +LD EA K+ + +G V
Sbjct: 203 DAFKIFETMLEKGKRLEVVSYNTL---IMGLCNNG---KLD-EAMKLFSSLLEDGNYVEP 255
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V TFN +I LCK R + A++++ M E G N T +LI ++ + + E+
Sbjct: 256 DVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELW 315
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
R+ G Y + C + + A +F +MK G +P Y+ LM C
Sbjct: 316 KRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKE 375
Query: 429 NRVDKANALFDEAVRNGVE 447
+ +++A LF E + E
Sbjct: 376 SSLEQARRLFQEMKESNCE 394
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 7/226 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD + +I G C + +L++A L EM E + Y CIL + LC++
Sbjct: 6 ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTY-CIL--MDGLCKEG--- 59
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R++ EA ++L +M+ G+ +V ++ LIS C + LF M E G PN +
Sbjct: 60 RVE-EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVY 118
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + E ++ M G Y + LC R +A+ +F+ M
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE 178
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
G P + TY++L+ C + A +F+ + G ++ Y
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYN 224
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 10/221 (4%)
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V+YN I ++ LC++K RL+ +A +L++ME + N T+ +L+ LCK R E+
Sbjct: 11 VSYNTI---INGLCKEK---RLE-KAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEE 63
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A++L M G + + LI + G + D M G + Y +
Sbjct: 64 AMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN 123
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
C +A +V M G PD TY ++ C R KA LFD G E
Sbjct: 124 GFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEP 183
Query: 449 KPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQI 489
Y V L K + K + E M K +RL+ +
Sbjct: 184 STVTYNVLINGLCKEGCIGDAFK---IFETMLEKGKRLEVV 221
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 136/342 (39%), Gaps = 34/342 (9%)
Query: 163 PKTLASCI--DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
P + CI D L + GR + + M+R G + D ++ C G +
Sbjct: 43 PNSFTYCILMDGLCKEGRVEEAMRLLGEMKRK-GLEVDVVVYSTLISGFCSKGCLDRGKA 101
Query: 221 LVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L + + I P+ + LI G+C G EA + M G + Y C++ +
Sbjct: 102 LFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLC 161
Query: 280 KLCRKK---DPFRLDSE-------------------------AEKVLLDMEYNGVPRNVE 311
K R + D F L +E A K+ M G V
Sbjct: 162 KDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWG--CHPNETTFLVLIKSLYQAARVGEGDEMID 369
++N LI LC + ++A+KLF + E G P+ TF +I+ L + R+ + E+ D
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYD 281
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M G + + I++AM +++++ G P S TY +++ +C +
Sbjct: 282 TMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMH 341
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
++ A LF +G+ +Y L K ++++ ++
Sbjct: 342 MLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARR 383
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 119/284 (41%), Gaps = 9/284 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR I+D +++ T I +++G + + ++R+ + G +
Sbjct: 271 GRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHK-LGLVPSSTT 329
Query: 202 LRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++++ C+ ++A+ L + + + P + L+ C + L++A+RL +EM
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
E T+++N ++D K D A+++L DM+ G+ + T++ I+ L
Sbjct: 390 ESNCEPDTISFNIMIDGTLK---AGDI----HSAKELLNDMQQMGLTPDAYTYSSFINRL 442
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K+ + E+A F M G P+ + LIK + E ++ +M G +
Sbjct: 443 SKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDL 502
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ LT LC M + ++ S + D L+ K
Sbjct: 503 EITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLLMK 546
>gi|357508101|ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499354|gb|AES80557.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 578
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 159/379 (41%), Gaps = 30/379 (7%)
Query: 96 TPSLVQSTLNFSPEAGRA-ILGFNHWLTQNANFSHTDETLSFFTDYFGRRK---DFKAIH 151
T LV L GR L F W +F D + + D+FGRRK D K +
Sbjct: 99 TSDLVLRVLMSYNHLGRTKTLKFFSWAGTKMDFQFDDSVIEYMVDFFGRRKLFDDIKCLL 158
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+V +K + K L+ CI L R GR +VL F+ ME +G K D V+ LC+
Sbjct: 159 MTIVAHKGQVSSKALSICIRFLGREGRINEVLSLFDEMESVFGCKPDNLVCNNVLYVLCK 218
Query: 212 NGYASYAEKLVKDTANEI-FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ +L ++I PD C +I G C G+ + A + R+M R G A
Sbjct: 219 KQSSEEMIELALSIFDKIESPDTYSCSNMIVGLCRLGRFEAALEIFRKMDRVGVHPTRSA 278
Query: 271 YNCILD--CV----------SKLCRKKDPFRL-----------DSEAEKVLLDMEYNGV- 306
N ++ C+ K+ + + P+ + A +V + +G+
Sbjct: 279 MNVLIGDLCLMSAKEGSVEKVKVTKTRRPYSILVPNMGGNRAAIQPAVEVFSAVVNSGLL 338
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P F L+S LC++ +E+A+K+ + E + + ++IK+L RV E +
Sbjct: 339 PSTFVVFR-LMSELCRLGNTEEAVKVLRIVEEKKLTCVQEGYSIVIKALCDHRRVEEAGK 397
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ RM G Y ++ LC + ++ A VFE M + PDS TY L+ C
Sbjct: 398 LFGRMLEIGLKPKLVVYNSVISMLCKLGDLDNANGVFEIMNKNRCFPDSITYIALIHAQC 457
Query: 427 AHNRVDKANALFDEAVRNG 445
A A L E + G
Sbjct: 458 ACKNWKVAYELLMEMLGLG 476
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 140/348 (40%), Gaps = 48/348 (13%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+ +LV+ L G F W + +F H+ E+ + G K F + DFL+
Sbjct: 67 SSNLVEQVLKRCKNLGFPAHRFFLWAKRIPDFEHSLESYHILVEILGCSKQFALLWDFLI 126
Query: 156 DNKEV----LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ +E + K RA P++ F RM ++G K D L ++ LC+
Sbjct: 127 EAREYNYFEITSKVFWIVFRAYSRANLPSEASRAFNRMV-EFGIKPCVDDLDQLLHSLCD 185
Query: 212 NGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ ++A++ K I P K +L++GW A+++ EM
Sbjct: 186 RKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLEN-------- 237
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
NC++D ++ +N L+ LCK + A
Sbjct: 238 -NCVVDLLA---------------------------------YNALLDALCKSGDVDGAY 263
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
K+F MG G P+ +F + I S A+ V +++DRMK + + L
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTL 323
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
C E+++ A + ++M G NPD+ TY+ +M C H V++A L
Sbjct: 324 CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 2/152 (1%)
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
EYN + F ++ + +A + F RM E+G P L+ SL V
Sbjct: 130 EYNYFEITSKVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHV 189
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E D+ K G K Y + I A VF++M + D Y+ L
Sbjct: 190 NHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNAL 249
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ C VD A +F E G +KP Y
Sbjct: 250 LDALCKSGDVDGAYKMFQEMGNLG--LKPDAY 279
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 8/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
V+ LC+ G S A ++V+D + + D + ++ G+C G L A+ EM + G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
V Y + ++ LCR + EAE+VL +ME G+ + T+ VLI CK+
Sbjct: 386 LAADGVTYTAL---INGLCRAGEL----KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A + +M + PN T+ L L + V +E++ M S G + Y
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC +EQAM M G PD TY ++ C +D+A++L E +
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558
Query: 444 NGVEVKPKEYRV 455
G++ Y V
Sbjct: 559 KGIKPTIVTYNV 570
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 133/312 (42%), Gaps = 11/312 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ D + + +V + VL + + R G +F+ M++ G D +
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR-GLAADGVT 392
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ LC G AE+++++ ++ D + +LI G+C GK+ EA + +M
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ V Y + D LC++ D A ++L +M G+ N+ T+N LI+ L
Sbjct: 453 QKRVTPNVVTYTALSD---GLCKQGDV----CAANELLHEMCSKGLELNIFTYNSLINGL 505
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK E A++ M E G P+ T+ +I +L Q+ + ++ M G
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C R+E + E M +P++ TY+ LM ++C + ++
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 441 AVRNGVEVKPKE 452
+ EV P E
Sbjct: 626 MLSQ--EVVPNE 635
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 144/350 (41%), Gaps = 21/350 (6%)
Query: 141 FGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
F R+ D A ++ + ++ T + I+ L RAG + + ME D G
Sbjct: 365 FCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME-DKGLDV 423
Query: 198 DKDSLRLVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
D + ++++ C+ G + A K+V+ + P+ L G C G + A
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ---KRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L EM G EL YN + ++ LC+ + +A + ++DM+ G+ +V T+
Sbjct: 481 ELLHEMCSKGLELNIFTYNSL---INGLCKAGNL----EQAMRTMIDMDEAGLKPDVYTY 533
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+I LC+ + + A L M + G P T+ VL+ + RV G +++ M
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
Y + + C + ++ +++ M + P+ TY++L+ C + +
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKE 653
Query: 434 ANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKR 483
A E + G + Y R L K KK + L EKM + R
Sbjct: 654 ALYFHSEMIEKGFRLTASSYNALIRLLNKK---KKFTEARRLFEKMRKDR 700
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 44/251 (17%)
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+++ S ++++ LC G A +L + A+ PD +++ G+C +L+ A +L
Sbjct: 250 EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP--PDVVTYGIMVHGYCTLSELETAIKL 307
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
EM G EL VAY + ++ LC + S+A +V+ DM +GV + F
Sbjct: 308 LSEMAARGLELNPVAYTSV---IALLCDEGQV----SDAVRVVEDMVMHGVVLDAAVFTT 360
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
++S C+ K AAR D M+ G
Sbjct: 361 VMSGFCR------------------------------KGDLAAAR-----NWFDEMQKRG 385
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
A Y + LC +++A V ++M+ G + D+ TY +L+ +C ++ +A
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445
Query: 436 ALFDEAVRNGV 446
+ ++ V+ V
Sbjct: 446 LVHNKMVQKRV 456
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 164/387 (42%), Gaps = 28/387 (7%)
Query: 71 LLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHT 130
+L L +P+ + ++ V + LV L+ A F W + +SH+
Sbjct: 103 ILHQLSGNPVEMKNKIE--HCGVKVSRELVLEVLSRIRNDWEAAFTFFLWAGRQLGYSHS 160
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEV------LGPKTLASCIDRLVRA---GRPTQ 181
G+ + F + + + V + P+TL I + GR
Sbjct: 161 VREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVGRAIN 220
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLI 240
+R + D G D + ++ LC AE L+ ++FP + K ++++
Sbjct: 221 TFYAHKRFKFDLGI----DEFQSLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIVL 275
Query: 241 KGWC-VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
GWC V G EA R+ REM + V+Y I+ C SK F+L ++ ++V
Sbjct: 276 NGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEV-- 333
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
G+ + + +N +I L K R +AI L M E G PN T+ LIK L +A
Sbjct: 334 -----GIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRAR 388
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
++ E + D M G++ + Y+ F L E+ ++ E M+ G +P +TY
Sbjct: 389 KIDEARGLFDEMLQHGHSPTIRTYHAFFRSL---RTGEEVFALLENMRKLGCHPTIDTYI 445
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
+L+ K+C + D L+++ NG+
Sbjct: 446 MLIRKFCRWRQFDDVFKLWNQISENGL 472
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++I+ +C + A R F+LG + +L S LCR K+ +AE +
Sbjct: 204 IMIRKYCAVHDVGRAINTFYAHKRFKFDLGIDEFQSLL---SALCRYKNV----QDAEHL 256
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRS-EDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+ + P N ++FN++++ C + S +A +++ M + H + ++ +I
Sbjct: 257 MF-CNKDVFPFNTKSFNIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYS 315
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+A + + ++ ++MK G +K Y + L + +A+++ + M+ G P++
Sbjct: 316 KAGNLYKVFKLYNQMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTV 375
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
TY+ L+ C ++D+A LFDE +++G + Y R L+
Sbjct: 376 TYNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLR 420
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ AS I +AG +V + +M ++ G + D+ V+ L + + S A L+K
Sbjct: 306 SYASIISCYSKAGNLYKVFKLYNQM-KEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKT 364
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I P+ + LIK C K+DEA+ L EM + G Y+
Sbjct: 365 MEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFR------- 417
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R E +L +M G ++T+ +LI C+ R+ +D KL+ ++ E G P
Sbjct: 418 ---SLRTGEEVFALLENMRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGP 474
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ ++++VLI L+ ++ E + MK
Sbjct: 475 DRSSYIVLIHGLFLNGKLEEAYKFYADMK 503
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 178/448 (39%), Gaps = 60/448 (13%)
Query: 34 PTHYLNFLSKPFSSKPTSNPKTIDDPDQVIAR---SLSGELLENLEADPL-PISQRLHLI 89
PT N SKP SS+PT +P + S LL NL + P LH +
Sbjct: 51 PTLNPNPNSKPESSQPTFSPNDFTLISTLFTNPSISPGSSLLTNLTQTGIKPTPPLLHAV 110
Query: 90 FSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA 149
F H +P L+ S W F + + K+F
Sbjct: 111 FDHFASSPKLLHS--------------LYLWALNQPGFKPDSSLFDSVINALAKMKEFDD 156
Query: 150 IHDFLVDN--------KEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
++D ++++ T A I R RAG + FE F +DK S
Sbjct: 157 AWSLVLDRIRRDDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTFE-------FAKDKKS 209
Query: 202 L----------RLVVEKLCENGYASYAEKLV---KDTANEIFPDDKICDLLIKGWCVDGK 248
+ ++++ LC+ G A A + + K+T P ++ ++++ GW K
Sbjct: 210 IVDSVSEMSLFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARK 269
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L A+RL EM V Y + V CR R +A +++ +M G+
Sbjct: 270 LKHAERLWEEMKNENVRPSVVTYGTL---VEGYCR----MRRVEKALEMVGEMTKEGIKP 322
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N +N +I L + R ++A+ + R P +T+ L+K +A + +++
Sbjct: 323 NAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKIL 382
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M S G+ Y F ++++ M+++ KM GHNPD TY L++ C
Sbjct: 383 KKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEE 442
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVD 456
+++ AV+ +E++ K Y +D
Sbjct: 443 EKLEL-------AVQVSMEMRHKGYDMD 463
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 11/224 (4%)
Query: 157 NKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY 214
KE + P + ID L AGR + LG ER + +V+ C+ G
Sbjct: 316 TKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHV-LQIGPTLSTYNSLVKGFCKAGD 374
Query: 215 ASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
A K++K + F P + + + GK+DE L +M G + Y+
Sbjct: 375 IEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHL 434
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
+L K+ +++ L A +V ++M + G ++ T +L LCK+ + E+A F
Sbjct: 435 VL----KMLCEEEKLEL---AVQVSMEMRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEF 487
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
M G P TF L L + ++ M S Y+
Sbjct: 488 EDMIRRGIIPQYLTFQKLNVELKKQGMNEMARKLCHLMSSVPYS 531
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 176/429 (41%), Gaps = 26/429 (6%)
Query: 48 KPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFS 107
+ ++NP+ ++ +VI + L N+EA + + L SH L+ L
Sbjct: 123 ESSTNPEEVERVCKVIDELFA--LDRNMEA----VLDEMKLDLSH-----DLIVEVLERF 171
Query: 108 PEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKT 165
A + F W + F+H T + + + F+ + L + K +L +T
Sbjct: 172 RHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET 231
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
+ A + +G FE M++ Y FK +++ +++ L A+ L
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKK-YKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
P+ +L+ GWC L EA R+ +M G + VA+N +L+ + + +K
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 350
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D A K+ M+ G NV ++ ++I + CK E AI+ F M + G P+
Sbjct: 351 D-------AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ LI ++ E++ M+ G+ K Y + + + E ++ K
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIA 465
M + P T++++M + + A++DE ++ G+ Y V R L
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL----- 518
Query: 466 VKKGKKRET 474
+ +GK RE
Sbjct: 519 ISEGKSREA 527
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 89/218 (40%), Gaps = 9/218 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
++ L+R+ + + + F M + G + S +++ C+ A + D +
Sbjct: 340 LEGLLRSMKKSDAIKLFHVM-KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + LI G+ KLD L +EM G YN ++ ++
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ------- 451
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++ ++ M N + ++ TFN+++ + R E ++ M + G P++ ++
Sbjct: 452 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSY 511
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
VLI+ L + E ++ M G DY +F
Sbjct: 512 TVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 11/293 (3%)
Query: 121 LTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK--TLASCIDRLVRAGR 178
L + F ET++ D GR K K KE P T ++ R
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRN 313
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI-FPDDKICD 237
+ + M D+G K D + +++E L + S A KL ++ P+ +
Sbjct: 314 LIEAARIWNDM-IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++I+ +C ++ A +M G + Y C+ ++ +K +LD+ E +
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL---ITGFGTQK---KLDTVYE-L 425
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L +M+ G P + +T+N LI + + E +++ +M + P+ TF +++KS +
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
A G + D M G Y + L + +A E+M G
Sbjct: 486 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 538
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 9/294 (3%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
P+ ID +AG + + F RME DYG K DK + +V+ L + A A+
Sbjct: 145 SPEPYMEMIDLAGKAGLAAEAVHAFNRME-DYGCKPDKIAFSVVISSLSKKRRAIEAQSF 203
Query: 222 VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ PD + L+ GWC G + EA+R+ EM G + Y+ ++D L
Sbjct: 204 FDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDA---L 260
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
CR R A V +M G N TFN L+ K R+E ++++ +M GC
Sbjct: 261 CRSGQITR----AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGC 316
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ T+ LI+S + + E ++++ +K G + + + + + A
Sbjct: 317 PPDAITYNFLIESHCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGCISKLGDVNSAHR 375
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+F KMK P++ TY++LM + D L E N +E YRV
Sbjct: 376 MFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRV 429
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L R+G+ T+ F M D G + + ++ + G ++
Sbjct: 252 TYSIVIDALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQ 310
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D I + LI+ C D L+EA ++ + + G L ++N I C+SKL
Sbjct: 311 MKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGD 369
Query: 284 KKDPFRL------------------------DSEAEKVLL----DMEYNGVPRNVETFNV 315
R+ D ++ ++L +M+ N + N T+ V
Sbjct: 370 VNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRV 429
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGC-HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LIS C I +A F M E C P+ + ++++ L +A ++ + +E++++M +
Sbjct: 430 LISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNR 489
Query: 375 GYA 377
G+
Sbjct: 490 GFV 492
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 156/356 (43%), Gaps = 18/356 (5%)
Query: 97 PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD 156
P V + + + + A+ FN T++ F HT ET + G F+A+ D L +
Sbjct: 7 PKHVAAVIRYQNDPLNALKMFNQVKTEDG-FKHTLETYKCMIEKLGLHGKFEAMEDVLAE 65
Query: 157 NKEVLGPKTLASCIDRLVR----AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
++ + K L ++R G+ + + FERM+ Y + S ++ L E
Sbjct: 66 MRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDF-YDCEPSVQSYNAIMNILVEY 124
Query: 213 GYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
GY S A K+ +KD I+PD + +K +C+ G+ A RL M G E V
Sbjct: 125 GYFSQAHKVYMRMKDIG--IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+Y ++ K + + + L E K G+ ++ TFN LI LCK +++
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLK-------QGICPDILTFNKLIHVLCKKGNVQES 235
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
KLF ++ + G PN TF + I+ L + + E +++ + S G Y +
Sbjct: 236 EKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICG 295
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
C ++ +A KM G P+ TY+ ++ +C + A+ + +A+ G
Sbjct: 296 FCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G + ++ + ++ C+ G A+K+++D + F PD+ LI G C DG ++ A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ E GF+ + YN ++ +SK L +A +++ DM +G ++ T
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQ-------GLVLQALQLMKDMMEHGCSPDIWT 428
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N++++ LCK+ DA + GC P+ TF LI + + + E++D M
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S G Y L LC +++ + F+ M G P+ TY++L+ +C +V
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 433 KANALFDEAVRNGV 446
+A LF E G+
Sbjct: 549 EAMELFKEMKTRGL 562
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 136/323 (42%), Gaps = 53/323 (16%)
Query: 165 TLASCIDRLVRAGRPTQVLG-FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T +S I+ L G + + F+E ME+ GFK +V+ L + G A +L+K
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEK--GFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
D PD +L++ G C G L +A + + G +N ++D C
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID---GYC 472
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++++ +A ++L M +G+ +V T+N L++ LCK R+ ++ + F M E GC
Sbjct: 473 KQRNM----DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG---------- 392
PN T+ +LI+S + +V E E+ MK+ G D T +CG
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT---PDIVTLCTLICGLCSNGELDKA 585
Query: 393 ------IER-----------------------IEQAMSVFEKMKTDGHNPDSETYDLLMT 423
IE+ + A +F KM PD+ TY +++
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645
Query: 424 KWCAHNRVDKANALFDEAVRNGV 446
+C +D A+ E + G+
Sbjct: 646 SYCKTGNIDLAHTFLLENISKGL 668
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 124/290 (42%), Gaps = 16/290 (5%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
L PK +A+ I P L F +++ + GFK ++ + ++EKL +G E
Sbjct: 5 LQPKHVAAVIRY---QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMED 61
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVD----GKLDEAKRLAREMYRGGFELGTVAYNCILD 276
++ + + D K+ + + G D GK+ EA + M E +YN I++
Sbjct: 62 VLAEMRKNV--DSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMN 119
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ + + S+A KV + M+ G+ +V T + + + C R A++L M
Sbjct: 120 ILVE-------YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM 172
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
GC N ++ +I Y+ E + D M G + + + LC +
Sbjct: 173 PGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+++ +F K+ G P+ T+++ + C +D+A L + V G+
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGL 282
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 116/306 (37%), Gaps = 44/306 (14%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
GRPT L M G + + S V+ + A L + + I PD
Sbjct: 159 TGRPTAALRLLNNMPGQ-GCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDIL 217
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ LI C G + E+++L ++ + G +N + LCRK EA
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF---IQGLCRKGAI----DEA 270
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
++L + G+ +V ++N LI CK + +A ++M G PNE T+ +I
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF----------- 403
+A + D+++ G+ + Y + LC + +AM+VF
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390
Query: 404 ------------------------EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ M G +PD TY+L++ C + AN + +
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN 450
Query: 440 EAVRNG 445
+A+ G
Sbjct: 451 DAIAKG 456
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++LI+ +C D K+ EA L +EM G V C L C LC + LD E
Sbjct: 535 NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL-CTLIC--GLCSNGE---LDKAYEL 588
Query: 297 -VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
V ++ EY + FN++I+ C A KLF++MG C P+ T+ V+I S
Sbjct: 589 FVTIEKEYK-FSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ + + S G + L LC R+ +A+ + M +G P+
Sbjct: 648 CKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 7/233 (3%)
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
K T+ I PD ++L+ +C +G++ EAK M + G + V YN ++D C
Sbjct: 270 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMD---GYC 326
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ + A+ +L M + GV V ++N++I+ CKI+ + A+KLF M
Sbjct: 327 LVNEV----NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF 382
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ LI L ++ R+ E+ID M G Y L LC +++A+++
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
K+K G P+ TY +L+ C R++ A +F++ + G + Y V
Sbjct: 443 LIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTV 495
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 11/340 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVK 223
T ++ I G+ +G F +M + D + ++V+ C+ G A+ L
Sbjct: 247 TYSALISGFCIVGKLKDAIGLFNKMTSE-NINPDVYTFNILVDAFCKEGRVKEAKNGLAM 305
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I PD + L+ G+C+ +++ AK + M G +YN +++ K+
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKI-- 363
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ +A K+ +M + + NV T+N LI LCK R A++L M + G P
Sbjct: 364 -----KMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQP 418
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ ++ +L + V + ++ ++K G Y + LC R+E A ++F
Sbjct: 419 DIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIF 478
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
E + G+N TY +++ +C+H D+A +L + N Y + L
Sbjct: 479 EDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDK 538
Query: 464 IAVKKGKK--RETLPEKMARKRRRLKQIRLSFVKKPKRMM 501
K +K RE + + LSF+ P +
Sbjct: 539 DENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFL 578
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 141/350 (40%), Gaps = 51/350 (14%)
Query: 141 FGRRKDFKAIHDF-----LVDNKEVLGPKTLASCIDR----------------LVRAGRP 179
F F IH F +N +V+ +L +C+ R LV++
Sbjct: 27 FPENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHY 86
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDL 238
VL F++ME G K + + +++ C+ G +A ++ + PD +
Sbjct: 87 HTVLSLFQKMEYR-GIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNT 145
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK---------LCRKKDP-- 287
IKG+C+ G++ +A ++ GF L V+Y +++ + K L R+ D
Sbjct: 146 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKL 205
Query: 288 FRLDSEAEKVLLD-----------------MEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+LD ++D M + N+ T++ LIS C + + +DAI
Sbjct: 206 VQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAI 265
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
LF +M +P+ TF +L+ + + RV E + M G Y +
Sbjct: 266 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGY 325
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
C + + A S+ M G +Y++++ +C VD+A LF E
Sbjct: 326 CLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKE 375
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 59/142 (41%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
MEY G+ N FN+LI+ C++ A + ++ + G P+ T IK +
Sbjct: 96 MEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQ 155
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + D++ + G+ + + Y + LC + A+ + ++ D Y
Sbjct: 156 IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYST 215
Query: 421 LMTKWCAHNRVDKANALFDEAV 442
++ C V+ A L+ E V
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMV 237
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 8/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
V+ LC+ G S A ++V+D + + D + ++ G+C G L A+ EM + G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
V Y + ++ LCR + EAE+VL +ME G+ + T+ VLI CK+
Sbjct: 386 LAADGVTYTAL---INGLCRAGEL----KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A + +M + PN T+ L L + V +E++ M S G + Y
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC +EQAM M G PD TY ++ C +D+A++L E +
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558
Query: 444 NGVEVKPKEYRV 455
G++ Y V
Sbjct: 559 KGIKPTIVTYNV 570
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 133/312 (42%), Gaps = 11/312 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ D + + +V + VL + + R G +F+ M++ G D +
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR-GLAADGVT 392
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ LC G AE+++++ ++ D + +LI G+C GK+ EA + +M
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ V Y + D LC++ D A ++L +M G+ N+ T+N LI+ L
Sbjct: 453 QKRVTPNVVTYTALSD---GLCKQGDV----CAANELLHEMCSKGLELNIFTYNSLINGL 505
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK E A++ M E G P+ T+ +I +L Q+ + ++ M G
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C R+E + E M +P++ TY+ LM ++C + ++
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 441 AVRNGVEVKPKE 452
+ EV P E
Sbjct: 626 MLSQ--EVVPNE 635
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 145/350 (41%), Gaps = 21/350 (6%)
Query: 141 FGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
F R+ D A ++ + ++ T + I+ L RAG + + ME D G
Sbjct: 365 FCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME-DKGLDV 423
Query: 198 DKDSLRLVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
D + ++++ C+ G + A K+V+ + P+ L G C G + A
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ---KRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L EM G EL YN + ++ LC+ + +A + ++DM+ G+ +V T+
Sbjct: 481 ELLHEMCSKGLELNIFTYNSL---INGLCKAGNL----EQAMRTMIDMDEAGLKPDVYTY 533
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+I LC+ + + A L M + G P T+ VL+ + RV G +++ M
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
Y + + C + ++ +++ M + P+ TY++L+ C + +
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKE 653
Query: 434 ANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKR 483
A E + G + Y R L K KK + L EKM ++R
Sbjct: 654 ALYFHSEMIEKGFRLTASSYNALIRLLNKK---KKFTEARRLFEKMRKER 700
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 44/251 (17%)
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+++ S ++++ LC G A +L + A+ PD +++ G+C +L+ A +L
Sbjct: 250 EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP--PDVVTYGIMVHGYCTLSELETAIKL 307
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
EM G EL VAY + ++ LC + S+A +V+ DM +GV + F
Sbjct: 308 LSEMAARGLELNPVAYTSV---IALLCDEGQV----SDAVRVVEDMVMHGVVLDAAVFTT 360
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
++S C+ K AAR D M+ G
Sbjct: 361 VMSGFCR------------------------------KGDLAAAR-----NWFDEMQKRG 385
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
A Y + LC +++A V ++M+ G + D+ TY +L+ +C ++ +A
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445
Query: 436 ALFDEAVRNGV 446
+ ++ V+ V
Sbjct: 446 LVHNKMVQKRV 456
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID L + G L F ME G K D + ++ LC +G K++++
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI + +GKL EAK L EM G T+ YN ++D C++
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID---GFCKEN--- 364
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA ++ M G ++ T+++LI++ CK +R +D ++LF + G PN T+
Sbjct: 365 -CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ Q+ ++ E+ M S G Y L LC + +A+ +FEKM+
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y++++ C ++VD A +LF GV+ Y V
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 13/306 (4%)
Query: 133 TLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T S D F G+ + K +++ ++ T S ID + + F+ M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
G + D + +++ C+ +L ++ +++ + P+ + L+ G+C GK
Sbjct: 377 VSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L+ AK L +EM G V Y +LD LC + ++A ++ M+ + +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLD---GLCDNGEL----NKALEIFEKMQKSRMTL 488
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+ +N++I +C + +DA LF + + G P+ T+ V+I L + + E D +
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+MK G Y + G + ++ + E+MK G + DS T +++ +
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SD 607
Query: 429 NRVDKA 434
R+DK+
Sbjct: 608 RRLDKS 613
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 25/218 (11%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD---PFRLDSEAE 295
L+ G+C K E + +MY T+ NC CRKK F + A
Sbjct: 88 LVLGFC---KGMELNGIEHDMYTM-----TIMINC-------YCRKKKLLFAFSVLGRAW 132
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
K+ G + TF+ L++ C R +A+ L RM E P+ T LI L
Sbjct: 133 KL-------GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 185
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
RV E +IDRM G+ + Y L RLC A+ +F KM+
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
Y +++ C D A +LF+E G++ Y
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 126/312 (40%), Gaps = 48/312 (15%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLI 240
VLGF + ME + G + D ++ +++ C +A ++ + PD L+
Sbjct: 89 VLGFCKGMELN-GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 147
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G+C++G++ EA L M V + + ++ LC K SEA VL+D
Sbjct: 148 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL---INGLCLKGRV----SEA-LVLID 199
Query: 301 --MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+EY P V T+ +++ LCK S A+ LF +M E + + ++I SL +
Sbjct: 200 RMVEYGFQPDEV-TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG--------------IER--------- 395
+ + + M+ G Y + LC I R
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 396 ------------IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ +A ++ +M T G PD+ TY+ L+ +C N + +AN +FD V
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 444 NGVEVKPKEYRV 455
G E Y +
Sbjct: 379 KGCEPDIVTYSI 390
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 9/283 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I L +AG+ + F+ M + GF D + VV+ LC++G A +++++
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQ-GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P ++ G +LDEA L E G EL + Y+ ++D K+ R
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRI---- 681
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA +L +M G+ NV T+N L+ L K ++A+ F M E C PN T+
Sbjct: 682 ---DEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTY 738
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + + + M+ G Y ++ L + I A S+FE+ KT
Sbjct: 739 SILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKT 798
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+G PDS +++ L+ NR +A +F+E G + K
Sbjct: 799 NGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVK 841
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 150/369 (40%), Gaps = 35/369 (9%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDR 172
+++ FN LT DE L+ F +KD K T ID
Sbjct: 350 SVVSFNSILTCLGKKRKVDEALTLFDVM---KKDAKP------------NISTYNIIIDM 394
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
L AGR + + ME G + S+ ++V++LC+ A ++ + + P
Sbjct: 395 LCMAGRVNEAYKIRDEMELA-GLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNP 453
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ LI G GK+D+A RL +M G + + Y ++ RK+D
Sbjct: 454 NSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKED----- 508
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
K+ +M G ++ N + + K E +F M +G P+ ++ +L
Sbjct: 509 --GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSIL 566
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A + E + M G+A+ + Y + LC ++++A V E+MK
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHV 626
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYL 460
+P TY ++ +R+D+A LF+EA G+E+ Y R+D YL
Sbjct: 627 HPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYL 686
Query: 461 KKPIAVKKG 469
+KKG
Sbjct: 687 ILEEMMKKG 695
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 134/334 (40%), Gaps = 34/334 (10%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
CID +AG FF + + +G + D S +V LC+ G AE+L A
Sbjct: 252 CIDCFGKAGSVDMAWKFFHEL-KAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAE 310
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P + +I G+ + D+A +L + G V++N IL C+ K + +
Sbjct: 311 RDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 370
Query: 288 FRL---------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
L +EA K+ +ME G+ N+ + N+++ L
Sbjct: 371 LTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRL 430
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + E+A ++F E GC+PN T+ LI L + ++ + + ++M AG+
Sbjct: 431 CKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP 490
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + R E ++++M G PD + M V+K A+F++
Sbjct: 491 IIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFED 550
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
G + Y + L K G+ RET
Sbjct: 551 MKSFGFLPDVRSYSILIHGL-----TKAGQARET 579
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L++ +G+++ A L E+ E V YN +DC K A K
Sbjct: 217 LVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSV-------DMAWKFF 269
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+++ +G+ + ++ ++ LCK R +A +LF +M P + +I A
Sbjct: 270 HELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSA 329
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R + ++++R++ G + LT L ++++A+++F+ MK D P+ TY
Sbjct: 330 ERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTY 388
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
++++ C RV++A + DE G+
Sbjct: 389 NIIIDMLCMAGRVNEAYKIRDEMELAGL 416
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%)
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
EKVL +M + G L++ L + RR EDA ++ M P + + VLI +
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L +A + E++ +M+ GY + + + L ++E A+++ +++K PD
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y++ + + VD A F E +G+
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWKFFHELKAHGL 277
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 13/290 (4%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD +G P +A + ID L + R FF+ +ER G + + + +V L
Sbjct: 280 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGL 338
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C + S A +L+ D + I P+ L+ + +GK+ EAK L EM R +
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 398
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y+ + ++ LC R+D EA ++ M G +V ++N LI+ CK +R ED
Sbjct: 399 VTYSSL---INGLCLHD---RID-EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 451
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+KLF M + G N T+ LI+ +QA V + E +M G + Y L
Sbjct: 452 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 511
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LC +E+A+ +FE M+ + D TY ++ C +V++A +LF
Sbjct: 512 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 561
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 14/338 (4%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGR 178
QN H T S + F RR L + LG + TL+S ++ + R
Sbjct: 722 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK-LGYEPNIVTLSSLLNGYCHSKR 780
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICD 237
++ + ++M G++ + + ++ L + AS A L+ + A PD
Sbjct: 781 ISEAVALVDQMFVT-GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 839
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+++ G C G D A L +M +G E G + YN I+D + K D L E
Sbjct: 840 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE---- 895
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
ME G+ NV T++ LIS LC R DA +L M E +P+ TF LI + +
Sbjct: 896 ---METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
++ E +++ D M Y + C +R+++A +FE M + PD T
Sbjct: 953 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 1012
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y+ L+ +C + RV++ +F E + G+ Y +
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + L F+ ME G + + + ++ LC G S A +L+ D +
Sbjct: 877 IDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI + +GKL EA++L EM + + V Y+ + ++ C
Sbjct: 936 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL---INGFCMHD--- 989
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RLD EA+++ M +V T+N LI CK +R E+ +++F M + G N T+
Sbjct: 990 RLD-EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 1048
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI+ L+QA E+ M S G Y L LC ++E+AM VFE ++
Sbjct: 1049 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 1108
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
P TY++++ C +V+ LF GV+
Sbjct: 1109 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 1147
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 146/349 (41%), Gaps = 34/349 (9%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD V G P T+ + I L + ++ + +RM G + D + +VV L
Sbjct: 787 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPDLVTYGVVVNGL 845
Query: 210 CENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ G A L+ K ++ P I + +I G C +D+A L +EM G
Sbjct: 846 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 905
Query: 269 VAYNCILDCVSKLCRKKDPFRLDS----------------------------EAEKVLLD 300
V Y+ ++ C+ R D RL S EAEK+ +
Sbjct: 906 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 965
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + ++ T++ LI+ C R ++A ++F M C P+ T+ LIK + R
Sbjct: 966 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V EG E+ M G Y + L + A +F++M +DG P+ TY+
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 1085
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
L+ C + +++KA +F+ R+ +E Y + + K V+ G
Sbjct: 1086 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 1134
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 146/336 (43%), Gaps = 38/336 (11%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDY---------------------FGRRKDFKAIH 151
+L +N + + H D+ L+ F + +GR D +
Sbjct: 869 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 928
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD----SLRLVVE 207
+++ K T ++ ID V+ G+ + ++ M KR D + ++
Sbjct: 929 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-----VKRSIDPSIVTYSSLIN 983
Query: 208 KLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
C + A+++ + + FPD + LIKG+C +++E + REM + G
Sbjct: 984 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 1043
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
TV YN + + L + D A+++ +M +GVP N+ T+N L+ LCK +
Sbjct: 1044 NTVTYNIL---IQGLFQAGDC----DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 1096
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E A+ +F + P T+ ++I+ + +A +V +G ++ + G Y
Sbjct: 1097 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 1156
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ C E+A ++F++MK DG P+S Y+ L+
Sbjct: 1157 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 1192
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 129/346 (37%), Gaps = 58/346 (16%)
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
++ + F+D R F +I DF +L D ++ G+ +VLG
Sbjct: 170 NDAIDLFSDMVKSRP-FPSIVDF----NRLLSAIVKLKKYDVVISLGKKMEVLGI----- 219
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKL 249
+ D + +V+ C S A ++ + PD L+ G+C ++
Sbjct: 220 -----RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 274
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
+A L +M G++ VAYN I+D + K R D F E E+ G+ N
Sbjct: 275 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER-------KGIRPN 327
Query: 310 VETFNVLISNLCKIRRSEDAIKL-----------------------------------FY 334
V T+ L++ LC R DA +L F
Sbjct: 328 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 387
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M P+ T+ LI L R+ E ++M D M S G Y + C +
Sbjct: 388 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 447
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
R+E M +F +M G ++ TY+ L+ + VDKA F +
Sbjct: 448 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
D KL++A L +M + V +N +L + KL + L + ME G
Sbjct: 166 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKK-------MEVLG 218
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ ++ TFN++I+ C + A+ + +M + G P+ T L+ + RV +
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++D+M GY Y + LC +R+ A F++++ G P+ TY L+
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 338
Query: 426 CAHNRVDKA-------------------NALFDEAVRNGVEVKPKE 452
C +R A +AL D V+NG ++ KE
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 384
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 19/241 (7%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R + K + +F+V T + I + R + + F M + G + +
Sbjct: 990 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTY 1048
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYR 261
++++ L + G A+++ K+ ++ P + + + L+ G C +GKL++A + + R
Sbjct: 1049 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 1108
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
E YN +++ + K + +D + L ++ GV +V +N +IS C
Sbjct: 1109 SKMEPTIYTYNIMIEGMCKAGKVEDGWDL-------FCNLSLKGVKPDVVAYNTMISGFC 1161
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD-----EMIDRMKSAGY 376
+ E+A LF M E G PN + LI+ AR+ +GD E+I M+S G+
Sbjct: 1162 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIR-----ARLRDGDREASAELIKEMRSCGF 1216
Query: 377 A 377
A
Sbjct: 1217 A 1217
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
KLD+A L EM + + ++ +L ++K+ + L + M+ G+P
Sbjct: 675 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ-------MQNLGIP 727
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N T+++LI+ C+ + A+ + +M + G PN T L+ + R+ E +
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+D+M GY + + L + +AM++ ++M G PD TY +++ C
Sbjct: 788 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847
Query: 428 HNRVDKANALFDEAVRNGVE 447
D A L ++ + +E
Sbjct: 848 RGDTDLAFNLLNKMEQGKLE 867
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 13/290 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID ++GR LG MER+ G D + +++ LC AE+L+ D
Sbjct: 232 TYNAMIDGYCKSGRMKDALGIKALMERN-GCNPDDWTYNILIYGLCGEK-PDEAEELLND 289
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
F I +I G+C ++D+A R+ M +L AY +++ + K CR
Sbjct: 290 AIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCR 349
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA++ + +M NG+ NV + +I CK+ + A+++F M GC P
Sbjct: 350 FK-------EAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRP 402
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L Q ++ + +I +M+ G G Y + C + A +F
Sbjct: 403 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 462
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
E M+ +G PD + Y++L C R ++A + VR GV + Y
Sbjct: 463 EMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTY 509
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 146/367 (39%), Gaps = 38/367 (10%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV-------DNKEVLGPKTLA 167
L F W+ + F HT + + RR+ A +D LV D E + +
Sbjct: 72 LAFFEWVARRPGFRHTAASHAALLQLLARRRA-PANYDKLVVSMVSCSDTAEDM--REAV 128
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTA 226
I + R G + + M G +R++ S ++++ LCE A LV
Sbjct: 129 DAIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQ 188
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ + LLIKG C +G++ A+R+ EM G YN ++D K R KD
Sbjct: 189 DGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKD 248
Query: 287 PFRLDS---------------------------EAEKVLLDMEYNGVPRNVETFNVLISN 319
+ + EAE++L D G V TF +I+
Sbjct: 249 ALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIING 308
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
CK R +DA+++ M C + + VLI L + R E E + M + G A
Sbjct: 309 YCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPN 368
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + C + ++ A+ VF M+ +G P++ TY L+ ++ KA AL
Sbjct: 369 VVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALIT 428
Query: 440 EAVRNGV 446
+ +G+
Sbjct: 429 KMQEDGI 435
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 14/298 (4%)
Query: 161 LGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
L P + S ID + G+ L F ME + G + + + ++ L ++ A
Sbjct: 365 LAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHE-GCRPNAWTYSSLIYGLIQDQKLHKA 423
Query: 219 EKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
L+ K + I P LI+G C + D A RL M + G AYN +
Sbjct: 424 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHA 483
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ K R ++ + + GV T+ L+ K ++ A L +M
Sbjct: 484 LCKSGRAEEAYSF----------LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 533
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
GC + T+ VL+++L + ++ E ++D+M +G Y ++ + + +
Sbjct: 534 NEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHD 593
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A S+F +M + GH P + TY + ++ +C ++++A L E R+GV Y V
Sbjct: 594 HAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNV 651
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 25/321 (7%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ FLV VL T S +D +AG E+M + G K D + ++++ LC
Sbjct: 494 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE-GCKADSYTYSVLLQALC 552
Query: 211 ENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ + A ++ T + + + ++I +GK D AK + EM G +
Sbjct: 553 KQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAT 612
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
Y + K+ + + EAE ++ +ME +GV +V T+NV I+ + + A
Sbjct: 613 TYTVFISSYCKIGQIE-------EAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRA 665
Query: 330 IKLFYRMGEWGCHPNETTFLVLIK-----SLYQAARVGEGD-----------EMIDRMKS 373
RM + C PN T+ +L+K SL A V ++++RM
Sbjct: 666 FSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVK 725
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + C R+E+A +F+ M+ +P+ E Y +L+ C K
Sbjct: 726 HGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGK 785
Query: 434 ANALFDEAVRNGVEVKPKEYR 454
A + + + G + + Y
Sbjct: 786 AVSFVTDMIEFGFQPHLESYH 806
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 15/266 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S I L++ + + + +M+ D G + +++ C+ A +L +
Sbjct: 406 TYSSLIYGLIQDQKLHKAMALITKMQED-GITPGVITYTTLIQGQCKKHEFDNAFRLFEM 464
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + PD++ ++L C G+ +EA + R G L V Y ++D SK
Sbjct: 465 MEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSK--- 518
Query: 284 KKDPFRLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+++ VL++ N G + T++VL+ LCK ++ +A+ + +M G
Sbjct: 519 -----AGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVK 573
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N + ++I + + + M + M S+G+ Y F++ C I +IE+A +
Sbjct: 574 CNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHL 633
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAH 428
+M+ DG PD TY++ + C H
Sbjct: 634 IGEMERDGVAPDVVTYNVFING-CGH 658
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 115/289 (39%), Gaps = 44/289 (15%)
Query: 161 LGPKTLASCIDRLVRAG----RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
L P A+ + L RA P L FFE + R GF+ S +++ L +
Sbjct: 46 LAPSVTAAHVADLFRAPVAPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPA 105
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
+KLV + C D D RE +D
Sbjct: 106 NYDKLVVSMVS----------------CSDTAED-----MREA---------------VD 129
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ + R R +A +L+ M G RN ++ +LI LC+ R +A+ L M
Sbjct: 130 AIQAIRRVGGDLR---KACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMM 186
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ GC N T+ +LIK L + R+ +++ M G Y + C R+
Sbjct: 187 VQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRM 246
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ A+ + M+ +G NPD TY++L+ C + D+A L ++A+ G
Sbjct: 247 KDALGIKALMERNGCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRG 294
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 14/147 (9%)
Query: 323 IRRSEDAIKLFYRMGE------W--------GCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+R + DAI+ R+G W GC NE ++ +LI+ L + V E ++
Sbjct: 124 MREAVDAIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLL 183
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M G ++ Y + LC RI A V E+M G P TY+ ++ +C
Sbjct: 184 VMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKS 243
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRV 455
R+ A + RNG Y +
Sbjct: 244 GRMKDALGIKALMERNGCNPDDWTYNI 270
>gi|224137884|ref|XP_002326464.1| predicted protein [Populus trichocarpa]
gi|222833786|gb|EEE72263.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 18/339 (5%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCID--- 171
L F W N+ H + F +++ + I D + E + C+D
Sbjct: 79 LRFFIWAGDQPNYRHNLYIYNKACSLFKIKQNPQVILDLI----ETYKLEKCVVCVDTFK 134
Query: 172 ---RLVRAGR-PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA- 226
RL +AG + L ++M ++ + D + +V+ LCE G A+KL+ +
Sbjct: 135 VVLRLCKAGGLADEALMVLKKMP-EFNIRPDTTAYNVVIRSLCEKGDVDMAKKLMGEMGL 193
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+++PD +IKG+C G+L+EA L M G VAY+ +LD + + +
Sbjct: 194 IDLYPDMITYVSMIKGFCDVGRLEEAFALFPVMSVHGCYPNVVAYSALLDGICRFGIVER 253
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
F L +E EK + G NV T+ +I + C+ R++DA+ + M GC PN
Sbjct: 254 AFELLAEMEK-----QGEGCCPNVITYTSVIQSFCEQGRTKDALSVLELMEVRGCAPNRV 308
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T I + ++ + I+R+ + G Y + L I+++E+A F +
Sbjct: 309 TASAWINGICTNGQLQDVYNFIERIVAGGSVSIGDCYSSLVVCLIKIKKVEEAEKTFRRA 368
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G PDS +++ + C+ RV L++E + G
Sbjct: 369 LSSGMKPDSLACSMMIREICSEKRVLDGFCLYEEVEKTG 407
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 145/321 (45%), Gaps = 14/321 (4%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFE 187
+T S G+R+D + + L+ E LG + T CI L RAG+ + G +
Sbjct: 228 KTYSALMVALGKRRDIETVMG-LLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILK 286
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVD 246
RM+ D G D + ++++ LC G + A++L +K A+ PD L+ +
Sbjct: 287 RMD-DAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDH 345
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G LD K EM G+ V + ++D + K+ + + F L M+ GV
Sbjct: 346 GDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAF-------GTLDVMKKQGV 398
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
N+ T+N LI L ++ R ++A++LF M G T+++ I ++ G+ +
Sbjct: 399 APNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++MK+ G L L R+E+A F +K G PD+ TY++LM +
Sbjct: 459 TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYG 518
Query: 427 AHNRVDKANALFDEAVRNGVE 447
RVD A L E NG +
Sbjct: 519 KAGRVDDAIKLLSEMEENGCD 539
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 114/277 (41%), Gaps = 9/277 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + I L+R R + L F ME G + + L ++ ++G + A K K
Sbjct: 404 TYNTLICGLLRLNRLDEALELFNSME-SLGLETTAYTYILFIDYYGKSGESGKAIKTFEK 462
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N I P+ C+ + G+L+EAK + + G + YN ++ C K R
Sbjct: 463 MKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGR 522
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D +L SE ME NG V N LI L K R ++A K+F RM E P
Sbjct: 523 VDDAIKLLSE-------MEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAP 575
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ L+ L + RV E + M + + L LC ++ A+ +
Sbjct: 576 TVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML 635
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+M PD TY+ ++ NRV+ A LF +
Sbjct: 636 FRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ 672
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV--SKLCRKKDPFRLDSEAEKVLLDME 302
+ G L EA +M + GF L +Y ++ + S CR EA KV M
Sbjct: 169 IRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCR---------EALKVYRRMV 219
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G+ +++T++ L+ L K R E + L M G PN TF + I+ L +A ++
Sbjct: 220 SEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKID 279
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E ++ RM AG Y + LC ++ A +F KMK H PD TY L+
Sbjct: 280 EAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLL 339
Query: 423 TKWCAHNRVDKANALFDEAVRNG 445
K+ H +D + E +G
Sbjct: 340 DKFSDHGDLDAIKEFWSEMEADG 362
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 129/285 (45%), Gaps = 17/285 (5%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-----YASYAEKLV 222
S ID L++A G F +M ++ G D + L ++ L ++G + Y E L
Sbjct: 793 SLIDGLLKARLTEMAWGLFYKM-KNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLF 851
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ P+ +++I G LD+A L ++ G F Y ++D + KL
Sbjct: 852 RGCK----PNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLG 907
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R + EA++ +M G N +N+L++ K E A +LF RM + G
Sbjct: 908 RLE-------EAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIR 960
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ ++ +++ L +V + + +K +G Y + L +R+E+A+S+
Sbjct: 961 PDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSL 1020
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
F++M+ G PD TY+ L+ V++A +++E G+E
Sbjct: 1021 FDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 124/298 (41%), Gaps = 18/298 (6%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
L + G+ F ++ + + ++ +++ L + A L N P
Sbjct: 762 LCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTP 821
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D +L + GK+ E L EM G + T+ +N ++ + K
Sbjct: 822 DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK----------- 870
Query: 292 SEAEKVLLDMEYNGVPRNVE----TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
S + +D+ Y+ + + T+ LI L K+ R E+A + F M ++GC PN
Sbjct: 871 SNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +L+ + V E+ RM G K Y + LC + +++ A+ FE++K
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIA 465
G +PD Y+L++ RV++A +LFDE G + P Y + L IA
Sbjct: 991 LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG--ITPDLYTYNALILNLGIA 1046
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
LL G+C EA ++ R M G + Y+ ++ + K R D E
Sbjct: 202 LLKSGFC-----REALKVYRRMVSEGIKPSLKTYSALMVALGK--------RRDIETVMG 248
Query: 298 LL-DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
LL +ME G+ N+ TF + I L + + ++A + RM + GC P+ T+ VLI +L
Sbjct: 249 LLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALC 308
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
A ++ E+ +MK++ + + Y L + ++ + +M+ DG+ PD
Sbjct: 309 NAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVV 368
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
T+ +L+ C +VD+A D + GV
Sbjct: 369 TFTILIDALCKVGKVDEAFGTLDVMKKQGV 398
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 125/295 (42%), Gaps = 12/295 (4%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWC 244
E+M R GF + S ++ L ++G+ A K+ + +E I P K L+
Sbjct: 180 LEKM-RKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALG 238
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
++ L +EM G + C+ L R ++D EA +L M+
Sbjct: 239 KRRDIETVMGLLQEMESLGLRPNIYTFTI---CIRILGRAG---KID-EAYGILKRMDDA 291
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +V T+ VLI LC + +A +LF +M P+ T++ L+ +
Sbjct: 292 GCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAI 351
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E M++ GY + + LC + ++++A + MK G P+ TY+ L+
Sbjct: 352 KEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICG 411
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKM 479
NR+D+A LF+ G+E Y + Y K + + GK +T EKM
Sbjct: 412 LLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGK--SGESGKAIKTF-EKM 463
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 11/240 (4%)
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV-AYNCIL 275
+AE LV N I DD + L+K C GK +A + ++ + ++ AYN ++
Sbjct: 739 FAESLV---CNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLI 795
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
D + K RL A + M+ G +V T+N+ + L K + ++ L+
Sbjct: 796 DGLLKA-------RLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEE 848
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M GC PN T ++I L ++ + + ++ + S ++ Y + L + R
Sbjct: 849 MLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGR 908
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+E+A FE+M G P+ Y++LM + V+ A LF V+ G+ K Y +
Sbjct: 909 LEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSI 968
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 136/328 (41%), Gaps = 21/328 (6%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDF-KAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRP 179
++ T T F DY+G+ + KAI F + P +A + + L GR
Sbjct: 429 ESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRL 488
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDL 238
+ FF +++ G D + +++ + G A KL+ + N P+ I +
Sbjct: 489 EEAKEFFNGLKK-CGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINS 547
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI ++DEA ++ + M V YN +L + K R + EA +
Sbjct: 548 LIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQ-------EATALF 600
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M + P N +FN L+ LCK + A+K+ +RM E C P+ T+ +I L +
Sbjct: 601 KGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKE 660
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVF-EKMKTDGHNPD 414
RV + +MK Y DY T L G+ RIE A V E + G + D
Sbjct: 661 NRVNYAFWLFHQMKKVIYP----DYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHAD 716
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAV 442
++ LM + ++ LF E++
Sbjct: 717 GSFWEDLMGGILIEAEIGQS-ILFAESL 743
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 125/278 (44%), Gaps = 11/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D L ++G+ ++ +E M G K + + +V+ L ++ A L D +
Sbjct: 830 LDALGKSGKIKELFDLYEEMLFR-GCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGD 888
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F P LI G G+L+EAK+ EM G YN +++ K
Sbjct: 889 FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGK-------- 940
Query: 289 RLDSE-AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ D E A ++ M G+ +++++++++ LC + + +DA+ F + G P+
Sbjct: 941 QGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVC 1000
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ ++I L ++ RV E + D M++ G Y + L +E+A ++E+++
Sbjct: 1001 YNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQ 1060
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ TY+ L+ D+A A++ + + G
Sbjct: 1061 LKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGG 1098
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 30/215 (13%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T ID L++ GR + FFE M DYG + +++ + G A +L
Sbjct: 893 PWTYGPLIDGLLKLGRLEEAKQFFEEM-LDYGCMPNCPLYNILMNGFGKQGDVETACELF 951
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ E I PD K +++ C+ GK+D+A E+ G + V YN +++ + +
Sbjct: 952 RRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRS 1011
Query: 282 CRKKDPFRL----------------------------DSEAEKVLLDMEYNGVPRNVETF 313
R ++ L EA K+ +++ G+ NV T+
Sbjct: 1012 QRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTY 1071
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
N LI + A ++ +M GC PN TF
Sbjct: 1072 NALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T ++ I+ L GR ++ L +RM + G K D ++ +V LC +G + A L+ K
Sbjct: 258 TFSTLINGLCLEGRVSEALELVDRM-VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 316
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ ++ C G+ A L R+M +L V Y+ I+D + K
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ F L +E ME G+ N+ T+N+LI C R +D KL M + +P
Sbjct: 377 LDNAFNLFNE-------MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF VLI S + ++ E +E+ M G A Y + C +++A +
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ M + G +P+ T+++L+ +C NR+D LF + GV Y
Sbjct: 490 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 539
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G F ME G + + +++ C G KL++D +
Sbjct: 368 IDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ +LI + +GKL EA+ L +EM G T+ Y ++D C++
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID---GFCKEN--- 480
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
LD + V L M G N+ TFN+LI+ CK R +D ++LF +M G + T+
Sbjct: 481 HLDKANQMVDL-MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 539
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI+ + ++ E+ M S Y L LC E+A+ +FEK++
Sbjct: 540 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 599
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D Y++++ C ++VD A LF GV+ K Y +
Sbjct: 600 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 134/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ + ++G+ + +ME + K D ++++ LC++G A L +
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 386
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + I ++LI G+C G+ D+ +L R+M + V ++ ++D K +
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EAE++ +M + G+ + T+ LI CK + A ++ M GC P
Sbjct: 447 LR-------EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 499
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF +LI +A R+ +G E+ +M G Y + C + ++ A +F
Sbjct: 500 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 559
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++M + P+ TY +L+ C + +KA +F++ ++ +E+ Y +
Sbjct: 560 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 611
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 132/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID V+ G+ + + M G D + +++ C+ + A ++V
Sbjct: 433 TFSVLIDSFVKEGKLREAEELHKEMIH-RGIAPDTITYTSLIDGFCKENHLDKANQMVDL 491
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P+ + ++LI G+C ++D+ L R+M G TV YN ++ +L +
Sbjct: 492 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 551
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A+++ +M VP N+ T+ +L+ LC SE A+++F ++ +
Sbjct: 552 L-------NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 604
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + ++I + A++V + ++ + G G K Y + LC + +A +F
Sbjct: 605 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 664
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
KM+ DGH PD TY++L+ K+ L +E R G V ++
Sbjct: 665 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 716
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 16/205 (7%)
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
E K +A +Y ++ NC C KLC + + + L E N +
Sbjct: 213 ELKGIAHNLYTL-----SIMINCFCRC-RKLC-----LAFSAMGKIIKLGYEPNTI---- 257
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
TF+ LI+ LC R +A++L RM E G P+ T L+ L + + E +ID+
Sbjct: 258 -TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 316
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G Y L +C + AM + KM+ D+ Y +++ C H
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+D A LF+E G+ Y +
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNI 401
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ N+ T +++I+ C+ R+ A ++ + G PN TF LI L R
Sbjct: 212 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E E++DRM G+ + LC + +AM + +KM G P++ TY
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ C + A L + +++ +Y +
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 366
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 158/372 (42%), Gaps = 21/372 (5%)
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNA---NFSHTDETLSFFTDYFGRRKD-- 146
H P P+++ + FS A L + +H TLS + F R +
Sbjct: 81 HSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLC 140
Query: 147 --FKAIHDFLVDNKEVLGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
F A+ + E P T+ ++ I+ L GR ++ L +RM + G K D ++
Sbjct: 141 LAFSAMGKIIKLGYE---PNTITFSTLINGLCLEGRVSEALELVDRM-VEMGHKPDLITI 196
Query: 203 RLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+V LC +G + A L+ K P+ ++ C G+ A L R+M
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
+L V Y+ I+D + K + F L +E ME G+ N+ T+N+LI C
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE-------MEMKGITTNIITYNILIGGFC 309
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
R +D KL M + +PN TF VLI S + ++ E +E+ M G A
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + C +++A + + M + G +P+ T+++L+ +C NR+D LF +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 442 VRNGVEVKPKEY 453
GV Y
Sbjct: 430 SLRGVVADTVTY 441
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G F ME G + + +++ C G KL++D +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ +LI + +GKL EA+ L +EM G T+ Y ++D C++
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID---GFCKEN--- 382
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
LD + V L M G N+ TFN+LI+ CK R +D ++LF +M G + T+
Sbjct: 383 HLDKANQMVDL-MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI+ + ++ E+ M S Y L LC E+A+ +FEK++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D Y++++ C ++VD A LF GV+ K Y +
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 134/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ + ++G+ + +ME + K D ++++ LC++G A L +
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + I ++LI G+C G+ D+ +L R+M + V ++ ++D K +
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EAE++ +M + G+ + T+ LI CK + A ++ M GC P
Sbjct: 349 LR-------EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF +LI +A R+ +G E+ +M G Y + C + ++ A +F
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++M + P+ TY +L+ C + +KA +F++ ++ +E+ Y +
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 132/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID V+ G+ + + M G D + +++ C+ + A ++V
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIH-RGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P+ + ++LI G+C ++D+ L R+M G TV YN ++ +L +
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A+++ +M VP N+ T+ +L+ LC SE A+++F ++ +
Sbjct: 454 L-------NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + ++I + A++V + ++ + G G K Y + LC + +A +F
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
KM+ DGH PD TY++L+ K+ L +E R G V ++
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G N TF+ LI+ LC R +A++L RM E G P+ T L+ L + + E
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ID+M G Y L +C + AM + KM+ D+ Y +++
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C H +D A LF+E G+ Y +
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ N+ T +++I+ C+ R+ A ++ + G PN TF LI L R
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E E++DRM G+ + LC + +AM + +KM G P++ TY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ C + A L + +++ +Y +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 14/293 (4%)
Query: 167 ASCIDRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
A D L+RA G+ + L F+ M + G + S ++ KL ++G A +
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGK-VGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206
Query: 223 KDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ PD+ ++ K +C DG++ +A EM G E+ VAY+ ++DC +
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG- 340
+D A ++L ++ G+ NV T+ +L+ CK R E+A ++ M E G
Sbjct: 267 GWTED-------ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD 319
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
+E + ++I Q R+ + + + M+ AG + Y + LC + R+E+
Sbjct: 320 IVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQ 379
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
V ++M+ G PD +Y+ L+ +C + KA + VRNG+ Y
Sbjct: 380 KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
I+ L + GR +V + ME D G + DK S +++ C G A ++ + N
Sbjct: 366 INGLCKLGRMEEVQKVLQEME-DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ + L+KG+C +D+A RL M + G ++ + +LD + K + +
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L E G+ +NV TFN +I+ LCKI R +A +L RM E C P+ T+
Sbjct: 485 NLWKETLA-------RGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L + ++G ++++M+ G+A + + F+T ++ + + +M
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G +P+ TY L+ WC + +A L+ E V NG+
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+A + P+ LI GWC +G L EA L EM G + ++ C K +
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655
Query: 285 KDP-------FRLDS---------EAEKV--LLDMEYNGVPRNVET-FNVLISNLCKIRR 325
+ +D E +K+ ++D +G P + +NV+I LCK R
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
DA LF + P+ T+ LI + + E + D M SAG Y
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNS 775
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LC ++ +A+++F K+++ G +P+ TY+ L+ ++C + +A L + V G
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835
Query: 446 VEVKPKEYRV 455
++ Y +
Sbjct: 836 IQPTVITYSI 845
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 7/204 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I G C G++ +AK L + F Y+ ++ + + F L
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL----RD 759
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
V+L G+ N+ T+N LI LCK + A+ LF ++ G PN T+ LI
Sbjct: 760 VMLSA---GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ + E ++ +M G Y + LC +E+A+ + ++M + +P+
Sbjct: 817 KEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYI 876
Query: 417 TYDLLMTKWCAHNRVDKANALFDE 440
TY L+ + +++ + L+DE
Sbjct: 877 TYCTLIHGYIKSGNMEEISKLYDE 900
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT--ANEIF 230
L ++GR FE + R+ F D + ++ +G A L +D + +
Sbjct: 710 LCKSGRIADAKSLFESL-RNKRFLPDNFTYSSLIHGCAASGSIDEAFSL-RDVMLSAGLT 767
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ + LI G C GKL A L ++ G + YN ++D K + + F+L
Sbjct: 768 PNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKL 827
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ M G+ V T+++LI LC E+AIKL +M E PN T+
Sbjct: 828 KQK-------MVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAG 375
LI ++ + E ++ D M G
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRG 905
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 8/277 (2%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I V GR M YG D + ++ + G A +++ D N+
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +L+ G+C GK+DEA + EM G + TV +NC+ +S C++
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL---ISAFCKEH--- 473
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+ EA ++ +M G +V TFN LIS LC++ + A+ L M G N T+
Sbjct: 474 RI-PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + + E ++++ M G + + Y + LC +++A S+FEKM
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
DGH P + + ++L+ C V++A E V G
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D + G+ + M D G K + ++ C+ A ++ ++ +
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + LI G C ++ A L R+M G TV YN +++ + K
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK--- 546
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA K++ +M + G P + T+N LI LC+ + A LF +M G P+ +
Sbjct: 547 ----EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L ++ V E E M G + + LC RIE +++F K++
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+G PD+ T++ LM+ C V A L DE + +G
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 13/249 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G++ D ++++ KL NG ++L+ +E I + + +++ + G +
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 253 KRLAREMYRGGFELGTV--AYNCILDC-VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
RL EM R + +YN +L+ VS C K A V DM +P
Sbjct: 166 TRLMLEM-RNVYSCEPTFKSYNVVLEILVSGNCHKV--------AANVFYDMLSRKIPPT 216
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
+ TF V++ C + + A+ L M + GC PN + LI SL + RV E ++++
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M G + + + + LC +RI +A + +M G PD TY LM C
Sbjct: 277 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Query: 430 RVDKANALF 438
RVD A LF
Sbjct: 337 RVDAAKDLF 345
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 11/276 (3%)
Query: 161 LGPKTLA-SC-IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
L P T+ +C I + R + + F M R G K D + ++ LCE +A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 219 EKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
L++D +E + + + LI + G++ EA++L EM G L + YN +
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL--- 570
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ LCR + + S EK+L D P N+ N+LI+ LC+ E+A++ M
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRD---GHAPSNISC-NILINGLCRSGMVEEAVEFQKEMV 626
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
G P+ TF LI L +A R+ +G M ++++ G + ++ LC +
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
A + ++ DG P+ T+ +L+ +D+
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 16/287 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L + R + L E M G D ++ V+ LC+ + A K+V
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFL-MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PDD L+ G C G++D AK L + + V +N ++ R D
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLDD-- 371
Query: 289 RLDSEAEKVLLDM--EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
A+ VL DM Y VP +V T+N LI K A+++ + M GC PN
Sbjct: 372 -----AKAVLSDMVTSYGIVP-DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY 425
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
++ +L+ + ++ E +++ M + G + ++ C RI +A+ +F +M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G PD T++ L++ C + + A L + + GV Y
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 123/327 (37%), Gaps = 50/327 (15%)
Query: 120 WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRA 176
W + H+ + G +FK I L+ K+ V S + +A
Sbjct: 100 WTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKA 159
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKI 235
G P Q M Y + S +V+E L A + D + +I P
Sbjct: 160 GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+++K +C ++D A L R+M + + C
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTK---------HGC---------------------- 248
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
VP +V + LI +L K R +A++L M GC P+ TF +I L
Sbjct: 249 ----------VPNSV-IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ R+ E +M++RM G+A Y + LC I R++ A +F ++ P+
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEI 353
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAV 442
++ L+ + H R+D A A+ + V
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 42/214 (19%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K+ + + + +V L T S I L RAG + FE+M RD
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD--------- 593
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
G+A P + C++LI G C G ++EA +EM
Sbjct: 594 -----------GHA---------------PSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G V +N +++ + + R +D + ++ G+P + TFN L+S LC
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTM-------FRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
K DA L E G PN T+ +L++S+
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 9/241 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+V C G A +LV D E PD + LI+G C G+ A + +M+R G
Sbjct: 140 MVAGYCGAGQLDAARRLVADMPVE--PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGC 197
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
V Y +L+ K K +A K+L +M G ++ T+NV+++ +C+
Sbjct: 198 LPDVVTYTILLEATCKRSGYK-------QAMKLLDEMHDKGCAPDIVTYNVVLNGICQEG 250
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R EDA++ + +GC PN ++ +++K L+ A R + +++++ M G +
Sbjct: 251 RVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
++ LC +E AM V E+M G P+S +Y+ L+ +C ++ KA + V
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370
Query: 445 G 445
G
Sbjct: 371 G 371
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L GR + L E M R G D + +++E C+ A KL+ +
Sbjct: 168 TYNTLIRGLCGRGRTSNALAVLEDMFRR-GCLPDVVTYTILLEATCKRSGYKQAMKLLDE 226
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ PD ++++ G C +G++++A + + G E TV+YN +L + R
Sbjct: 227 MHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAER 286
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D AEK++ +M + G P NV TFN+LIS LC+ E A+++ +M ++GC P
Sbjct: 287 WED-------AEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTP 339
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ L+ + + ++ + E ++ M S G Y LT LC ++ A+ +
Sbjct: 340 NSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELL 399
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++K G +P +Y+ ++ + +A L DE G++
Sbjct: 400 HQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQ 443
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 135/287 (47%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + + GR + F + + YG + + S +V++ L AEKL+++ A++
Sbjct: 243 LNGICQEGRVEDAMEFLKNLP-SYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKG 301
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + + ++LI C G ++ A + +M + G +++YN +L C++K
Sbjct: 302 CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLH---AFCKQK--- 355
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++ E V L M G ++ ++N L++ LC+ + AI+L +++ + GC P ++
Sbjct: 356 KIHKAMEFVEL-MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISY 414
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L +A + E E++D M S G Y + LC +RIE+A+ F K++
Sbjct: 415 NTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQD 474
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G P + Y+ ++ C A LF + +G Y +
Sbjct: 475 MGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTI 521
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-------DL 238
F + G D S ++ LC NG A +L+ DK C +
Sbjct: 363 FVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL------KDKGCSPVLISYNT 416
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G GK EA L EM G + + Y+ I S LCR+ R++ EA +
Sbjct: 417 VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTI---ASGLCRED---RIE-EAVRTF 469
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
++ G+ +N ++ LCK R + +AI LF M GC PNE+T+ +L++ L
Sbjct: 470 CKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYE 529
Query: 359 ARVGEGDEMIDRMKSAG 375
V E E+ ++ S G
Sbjct: 530 GLVKEARELFAQLCSRG 546
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C LIK C G+ +A+R+ + G ++ + YN + V+ C +LD+ A
Sbjct: 107 CAALIKKLCASGRTADARRV---LAASGPDV--MVYNAM---VAGYCGAG---QLDA-AR 154
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+++ DM V + T+N LI LC R+ +A+ + M GC P+ T+ +L+++
Sbjct: 155 RLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEAT 211
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + + +++D M G A Y L +C R+E AM + + + G P++
Sbjct: 212 CKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNT 271
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+Y++++ R + A L +E G
Sbjct: 272 VSYNIVLKGLFTAERWEDAEKLMEEMAHKG 301
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 103/278 (37%), Gaps = 87/278 (31%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+++KLC +G + A +++ + PD + + ++ G+C G+LD A+RL +M
Sbjct: 110 LIKKLCASGRTADARRVLAASG----PDVMVYNAMVAGYCGAGQLDAARRLVADM----- 160
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
P D+ T+N LI LC
Sbjct: 161 ----------------------PVEPDAY------------------TYNTLIRGLCGRG 180
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R+ +A+ + M GC P+ T+ +L+++ K +GY
Sbjct: 181 RTSNALAVLEDMFRRGCLPDVVTYTILLEA---------------TCKRSGY-------- 217
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+QAM + ++M G PD TY++++ C RV+ A
Sbjct: 218 ------------KQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSY 265
Query: 445 GVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
G E Y + LK ++ + E L E+MA K
Sbjct: 266 GCEPNTVSYNI---VLKGLFTAERWEDAEKLMEEMAHK 300
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 34/375 (9%)
Query: 90 FSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDY--------- 140
+ V +P V ++LNF R + L +N L + T+
Sbjct: 62 LNGVESSPDRVNTSLNFEESEIRHL----RRLIRNGELEEGSRFLEYMTNKGKSPDVIAC 117
Query: 141 ---------FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMER 191
GR K+ I L ++ V+ + I ++G + L +RM
Sbjct: 118 TALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM-- 175
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLD 250
G + + V+ LC+ G A +++ + ++ +PD C +LI C + +
Sbjct: 176 --GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVG 233
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+A +L EM G + V YN + + C+ RLD EA + L + G +V
Sbjct: 234 QAMKLFNEMRNKGCKPDVVTYNVL---IKGFCKGG---RLD-EAIRFLKKLPSYGCQPDV 286
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+ N+++ +LC R DA+KL M GC P+ TF +LI L Q +G+ +++
Sbjct: 287 ISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEM 346
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G+ + + + C + I++A+ E M + G PD TY++L+T C +
Sbjct: 347 MPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGK 406
Query: 431 VDKANALFDEAVRNG 445
VD A + + G
Sbjct: 407 VDDAVVILSQLSSKG 421
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 8/251 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++++ C+ A KL + N+ PD ++LIKG+C G+LDEA R
Sbjct: 215 DVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFL 274
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+++ G + +++N IL + R D A K+L M G +V TFN+L
Sbjct: 275 KKLPSYGCQPDVISHNMILRSLCSGGRWMD-------AMKLLATMLRKGCLPSVVTFNIL 327
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LC+ A+ + M + G PN +F LI+ + E ++ M S G
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y LT LC +++ A+ + ++ + G +P +Y+ ++ + + A
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 447
Query: 437 LFDEAVRNGVE 447
L +E G++
Sbjct: 448 LLEEMCYKGLK 458
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 9/275 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ID + Q + F M R+ G K D + ++++ C+ G A + +K
Sbjct: 218 TCTVLIDATCKESGVGQAMKLFNEM-RNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKK 276
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ D I +++++ C G+ +A +L M R G V +N +++ LC+
Sbjct: 277 LPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN---FLCQ 333
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K L +A VL M +G N +FN LI C + + AI+ M GC+P
Sbjct: 334 KG----LLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +L+ +L + +V + ++ ++ S G + Y + L + + E A+ +
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
E+M G PD T ++ +V +A F
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFF 484
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E + L M G +V LI CKI R+++A ++ + E G + T++ VLI
Sbjct: 97 EGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLI 156
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
++ + E ++DRM G + Y L LC +++QAM V +
Sbjct: 157 SGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCY 213
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD T +L+ C + V +A LF+E G + Y V
Sbjct: 214 PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNV 256
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 108/275 (39%), Gaps = 9/275 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
L GR + M R G + +++ LC+ G A +++ P
Sbjct: 296 LCSGGRWMDAMKLLATMLRK-GCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTP 354
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ + + LI+G+C +D A M G V YN +L + LC+ ++D
Sbjct: 355 NSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILL---TALCKDG---KVD 408
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+A +L + G ++ ++N +I L K+ ++E A++L M G P+ T +
Sbjct: 409 -DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSV 467
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ L + +V E + +K Y +T LC ++ A+ M G
Sbjct: 468 VGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGC 527
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P TY L+ + A+ L +E G+
Sbjct: 528 KPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 127/278 (45%), Gaps = 8/278 (2%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ V +GR + + GF+ D + ++++ LC+ GY A + + + +
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F P+ +LI G+C G +EA ++ M G L TV YNC++ + K + +D
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++ E M G ++ TFN LI LCK + E+A+ L+ M G N T+
Sbjct: 463 QMYGE-------MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTY 515
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + + + D+++ M+ G + Y + LC E+ + + E+M
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ P + ++L+ +C +V+ A + ++ G+
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL 613
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 143/339 (42%), Gaps = 48/339 (14%)
Query: 147 FKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
F+ D L N + G + T ID L + G L F + M + GF+ + +
Sbjct: 352 FEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITY 410
Query: 203 RLVVEKLCENGYASYAEKLVKDTA---------------NEIFPDDKICDLL-------- 239
++++ C+ G+ A K+V + + D KI D L
Sbjct: 411 TILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSS 470
Query: 240 -------------IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
I G C + K++EA L R+M G TV YN ++ +L
Sbjct: 471 KGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRL----- 525
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
L +A+K++ +M + G P + T+N LI LCK +E + L +M P+
Sbjct: 526 --ELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ +LI S + +V + + + M G Y + LC + R ++A+++F +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G +PD+ TY+ L++++C + A L + V NG
Sbjct: 644 QAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNG 682
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 16/288 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L R + + E M G + D + V+ LC+ G A KL
Sbjct: 242 IHALSENNRVNEAMKLLEEMFL-MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 230 FPDDK-ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKD 286
F D I L+ G C GK+DEA+ + ++ TV YN +++ VS
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPN----TVLYNTLINGYVVSG------ 350
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + + + +M G + TFN++I LCK A++ M + G PN
Sbjct: 351 --RFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVI 408
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +LI + E ++++ M + G ++ Y + LC +I+ A+ ++ +M
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ G PD T++ L+ C ++++++A L+ + + GV Y
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYN 516
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 130/320 (40%), Gaps = 43/320 (13%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERME-RDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
+T I L +AGR + +RM RD F D ++ LC G A ++
Sbjct: 271 QTFNDVIHGLCKAGRIHEAAKLHDRMLLRD--FTADALIQGYLMHGLCRMGKVDEARAML 328
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA-REMYRGGFELGTVAYNCILDCVSKL 281
N P+ + + LI G+ V G+ +EAK L + M GFE +N ++D L
Sbjct: 329 SKIPN---PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMID---GL 382
Query: 282 CRK--------------KDPFR---------LDS--------EAEKVLLDMEYNGVPRNV 310
C+K K F +D EA KV+ M G+ N
Sbjct: 383 CKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNT 442
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+N LI LCK + +DA++++ M GC P+ TF LI L + ++ E +
Sbjct: 443 VGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRD 502
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G Y + +E I+QA + +M+ G D+ TY+ L+ C
Sbjct: 503 MLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGA 562
Query: 431 VDKANALFDEAVRNGVEVKP 450
+K L ++ G E+ P
Sbjct: 563 TEKCLGLIEQMF--GEEIFP 580
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 14/266 (5%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKIC 236
PT + FE+ G+ L+++KL G +KL+K +E +F +
Sbjct: 75 PTS-MDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFI 133
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDC-VSKLCRKKDPFRLDSEA 294
L+++ + G +A RL +M+ FE +YN +L+ V+ C K P
Sbjct: 134 -LIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAP------- 185
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
V DM G+ V TF V++ C + + A L M + GC PN + +LI +
Sbjct: 186 -NVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHA 244
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + RV E ++++ M G + + + + LC RI +A + ++M D
Sbjct: 245 LSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304
Query: 415 SETYDLLMTKWCAHNRVDKANALFDE 440
+ LM C +VD+A A+ +
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAMLSK 330
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 137/334 (41%), Gaps = 16/334 (4%)
Query: 127 FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASCIDRLV-RAGRPTQVL 183
+ H+ D G +FK I L K+ + ++L I R +AG P Q
Sbjct: 90 YIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQAT 149
Query: 184 GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKG 242
M Y F+ S +V+E L A + D + I P +++K
Sbjct: 150 RLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKA 209
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
+C+ ++D A L R+M + G ++ Y ++ +S+ R +EA K+L +M
Sbjct: 210 FCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRV-------NEAMKLLEEMF 262
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G +V+TFN +I LCK R +A KL RM + L+ L + +V
Sbjct: 263 LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVD 322
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV-FEKMKTDGHNPDSETYDLL 421
E M+ ++ + + Y + R E+A + ++ M G PD+ T++++
Sbjct: 323 EARAMLSKIPNPNTVL----YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIM 378
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ C + A DE V+ G E Y +
Sbjct: 379 IDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTI 412
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 90/233 (38%), Gaps = 61/233 (26%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G D + +++ LC+ G L++ EIFP C++LI +C GK+++A
Sbjct: 542 GCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDA 601
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ R DM G+ ++ T
Sbjct: 602 LQFLR------------------------------------------DMIQRGLTPDIVT 619
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI+ LCK+ R ++A+ LF + G HP+ T+ LI + +++ +
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGV 679
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
S G+ I + + L ++ F K +N DSE + +LM W
Sbjct: 680 SNGF-IPNEITWSIL------------INYFVK-----NNSDSEQFTILMGNW 714
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 9/294 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T A+ + L AG + + F M D G D ++V LC G A A L+
Sbjct: 144 PFTYAALLQGLCGAGMVREAMAVFAGMWPD-GCAPDSHVYSIMVHGLCGAGRAGEAVALL 202
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
D + F P+ + + LI G+C G L+ A + + M G Y +
Sbjct: 203 TDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYT---QLICGF 259
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C+ R A + M G+ NV T+ LI C E A +L + M G
Sbjct: 260 CKSGKVER----AMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL 315
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PNE T LVLI +L + R+ E + + + G + + Y + LC + + A +
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHN 375
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ +K+ T+G PD+ Y L+ C N++ +A +L ++ + +GV+ + +
Sbjct: 376 LMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTI 429
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 127/293 (43%), Gaps = 9/293 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I ++G+ + + + RM + G + + +++ C G+ +A +L+
Sbjct: 250 RTYTQLICGFCKSGKVERAMVLYSRM-IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLH 308
Query: 224 DT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
A + P++ C +LI C G+++EA++ + + G ++ V Y ++D LC
Sbjct: 309 SMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMID---ALC 365
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ + D A ++ + G + ++ LI LC+ + +AI L M E G
Sbjct: 366 KSG---KFDG-AHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQ 421
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N F +LI + R + DRM +AG Y F+ C R+E A S+
Sbjct: 422 ANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESM 481
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M G P+ TY+ L+ + V +A + + NG + + Y V
Sbjct: 482 MIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTV 534
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI +C G L AKR + R G + AY V CR L + A ++
Sbjct: 80 LINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSF---VLGYCRTG----LFAHACRLF 132
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
L M G R T+ L+ LC +A+ +F M GC P+ + +++ L A
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R GE ++ G+ Y + C +E A+ +F+ M++ G P+ TY
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
L+ +C +V++A L+ + G+
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGL 280
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 63/342 (18%), Positives = 118/342 (34%), Gaps = 65/342 (19%)
Query: 137 FTDYFGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
D + F H+ + + V +S ID L R + + + M +
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDM-IES 418
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TANEIFPDDKICDLLIKGWCVDGKLDE 251
G + + ++++K + S + K++ D A + PD + I+ +C DG++++
Sbjct: 419 GVQANAVPFTILIDKHLRE-FRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMED 477
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A+ + +M G YN ++ + L L S+A L +M NG N E
Sbjct: 478 AESMMIQMIDHGVRPNLTTYNTLIKGYANL-------GLVSQAFSSLKNMIDNGCKPNDE 530
Query: 312 TFNVL---------------------------------------------------ISNL 320
++ VL I L
Sbjct: 531 SYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCL 590
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K+ R E+A M P+E + +I+ Y+ + E +D M Y
Sbjct: 591 SKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRL 650
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ Y + LC A S+F + + +N D + +L+
Sbjct: 651 ESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILI 692
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 13/290 (4%)
Query: 162 GPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY 217
GPK T S ++ L + GR + FF+ M G K + +++ G S
Sbjct: 303 GPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGK-GIKPSVTTYGIMLHGYATKGALSE 361
Query: 218 AEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
L+ AN I P+ I ++ + G +D+A + +M + G V+Y ++D
Sbjct: 362 MHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALID 421
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ KL R D AE M GV ++ F+ L+ LC + + E +LF+ M
Sbjct: 422 ALCKLGRVDD-------AEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
G HPN F ++ +L + RV EG ++D ++ G Y + C I
Sbjct: 475 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 534
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++A + E M + G PDS +Y+ L+ +C R+D A + F + + NG+
Sbjct: 535 DEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGI 584
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 140/309 (45%), Gaps = 16/309 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G + D S +++ C G A KL++ + + PD + L+ G+C G++D A
Sbjct: 513 GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA 572
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
R+M G G V YN IL + + R SEA+++ L+M +G ++ T
Sbjct: 573 YSHFRKMLSNGITPGVVTYNTILHGLFQTKRF-------SEAKELYLNMINSGTKWDIYT 625
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N++++ LCK ++AIK+F + G N TF ++I +L + R + ++ +
Sbjct: 626 YNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 685
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G Y + L +E+ S+F M+ +G P+S+ + L+ + +
Sbjct: 686 ANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 745
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLS 492
+A A ++ + + V+ I++ + + + + +K R L + S
Sbjct: 746 RAGAYLS-------KLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSS 798
Query: 493 -FVKKPKRM 500
+KK +R+
Sbjct: 799 ALIKKARRI 807
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 14/302 (4%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
+ G + + F +M R G D S +++ LC+ G AE NE + PD
Sbjct: 390 KCGIIDKAMDIFNKM-RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ L+ G C K ++ + L EM G V +N IL LC++ E
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTIL---CNLCKEGRVM----E 501
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
++++ +E GV +V ++N LI C ++A KL M G P+ ++ L+
Sbjct: 502 GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLH 561
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+A R+ +M S G G Y L L +R +A ++ M G
Sbjct: 562 GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW 621
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
D TY++++ C N VD+A +F G+++ + + L +K G+K +
Sbjct: 622 DIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGAL-----LKGGRKED 676
Query: 474 TL 475
+
Sbjct: 677 AM 678
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 128/313 (40%), Gaps = 53/313 (16%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF---- 230
R G VL +RM + G D S ++++ LC A A +L+ A++
Sbjct: 144 RVGEAMDVL--LQRMP-ELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCP 200
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ +I G+ +G++D+ L EM G V Y ++D LC+ + L
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVID---GLCKAQ----L 253
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
AE V M NGV N++T+N LI I + ++ +++ M G PN T+
Sbjct: 254 FDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGS 313
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAG-------YAIGKKDY---------YEFLTRL---- 390
L+ L + R E D M G Y I Y ++ L +
Sbjct: 314 LLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANG 373
Query: 391 -----------------CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
CGI I++AM +F KM+ G +PD+ +Y L+ C RVD
Sbjct: 374 ISPNHHIFNIFFSAYAKCGI--IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDD 431
Query: 434 ANALFDEAVRNGV 446
A F++ + GV
Sbjct: 432 AEVKFNQMINEGV 444
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 12/258 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI--FPDDKICDLLIKGWCVDGKLDE 251
G++ D + ++ LC+ A ++ E+ PD ++L+KG C + + +E
Sbjct: 124 GWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEE 183
Query: 252 AKRLAREMYRGGFEL---GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
A L M V+Y+ +++ + P+ L L+M G+P
Sbjct: 184 ALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNL-------FLEMMDRGIPP 236
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+ +I LCK + + A +F +M + G PN T+ LI + E M+
Sbjct: 237 DVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRML 296
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M + G Y L LC R +A F+ M G P TY +++ +
Sbjct: 297 EEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATK 356
Query: 429 NRVDKANALFDEAVRNGV 446
+ + + L + V NG+
Sbjct: 357 GALSEMHDLLNLMVANGI 374
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 20/284 (7%)
Query: 182 VLGFFERMERDYGFKR--DKDSLRLVVEKLC-----ENGYASYAEKLVKDTANEIFPDDK 234
V+ F RM RD K ++ + +++ C E+G+A++ L+ T + D
Sbjct: 75 VVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFG--LILKTGWRM--DHI 130
Query: 235 ICDLLIKGWCVDGKLDEA-KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ + L+ G C ++ EA L + M G TV+YN +L LC +K R +
Sbjct: 131 VINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILL---KGLCNEK---RAEEA 184
Query: 294 AE--KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
E ++ D + P NV +++ +I+ + + LF M + G P+ T+ +
Sbjct: 185 LELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTV 244
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A + + +M G Y + I + ++ + + E+M G
Sbjct: 245 IDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGP 304
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+ TY L+ C + R +A FD + G++ Y +
Sbjct: 305 KPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGI 348
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
++ Y+ + E L+K + PD + ++ G G+ EAK L M ++
Sbjct: 808 DDAYSLFREMLMKG----LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 863
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
YN IL+ LC+ EA K+ + G+ N+ TFN++I L K R EDA+
Sbjct: 864 YNIILN---GLCKSN----CVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAM 916
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
LF + G P+ T+ ++ ++L + + E D + M+ +G + + + RL
Sbjct: 917 DLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRL 976
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
I +A + K+ + ++ T L++
Sbjct: 977 LQRGDISRAGAYLSKLDEKNFSLEASTTSELIS 1009
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 36/297 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
I L++ GR + F + + G ++ + RLVVE L E G + L N
Sbjct: 665 IGALLKGGRKEDAMDLFAAIPAN-GLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ ++ + L++ R ++RG AY +SKL + F
Sbjct: 724 TAPNSQMLNALVR---------------RLLHRGDISRAG-AY------LSKLDERN--F 759
Query: 289 RLDSEAEKVLLDM----EYN----GVPRNVETFNVLISN--LCKIRRSEDAIKLFYRMGE 338
+++ +L+ + EY +P+ N S+ + K RR +DA LF M
Sbjct: 760 SVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLM 819
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P+ T+ ++ L+Q R E E+ M ++ + Y L LC +++
Sbjct: 820 KGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDE 879
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A +F+ + + G + T+++++ R + A LF NG+ YR+
Sbjct: 880 AFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRL 936
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 14/293 (4%)
Query: 167 ASCIDRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
A D L+RA G+ + L F+ M + G + S ++ KL ++G A +
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGK-VGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206
Query: 223 KDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ PD+ ++ K +C DG++ +A EM G E+ VAY+ ++DC +
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG- 340
+D A ++L ++ G+ NV T+ +L+ CK R E+A ++ M E G
Sbjct: 267 GWTED-------ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD 319
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
+E + ++I Q R+ + + + M+ AG + Y + LC + R+E+
Sbjct: 320 IVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQ 379
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
V ++M+ G PD +Y+ L+ +C + KA + VRNG+ Y
Sbjct: 380 KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
I+ L + GR +V + ME D G + DK S +++ C G A ++ + N
Sbjct: 366 INGLCKLGRMEEVQKVLQEME-DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ + L+KG+C +D+A RL M + G ++ + +LD + K + +
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L E G+ +NV TFN +I+ LCKI R +A +L RM E C P+ T+
Sbjct: 485 NLWKETLA-------RGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L + ++G ++++M+ G+A + + F+T ++ + + +M
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G +P+ TY L+ WC + +A L+ E V NG+
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 26/262 (9%)
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+A + P+ LI GWC +G L EA L EM G + ++ C K +
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655
Query: 285 KDP-------FRLDS---------EAEKV--LLDMEYNGVPRNVET-FNVLISNLCKIRR 325
+ +D E +K+ ++D +G P + +NV+I LCK R
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
DA LF + P+ T+ LI + + E + D M SAG Y
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNS 775
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LC ++ +A+++F K+++ G +P+ TY+ L+ ++C + +A L + V G
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835
Query: 446 -VEVKPK------EYRVDPRYL 460
+E K E VDP Y+
Sbjct: 836 YMEEAIKLLDQMIENNVDPNYI 857
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 24/189 (12%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ LC++G + A+ L + N+ F PD+ LI G G +DEA L M
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + YN + + LC+ S A + ++ G+ N T+N LI CK
Sbjct: 765 GLTPNIITYNSL---IYGLCKSGKL----SRAVNLFNKLQSKGISPNGITYNTLIDEYCK 817
Query: 323 IRRS----------------EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
++ E+AIKL +M E PN T+ LI ++ + E +
Sbjct: 818 EGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISK 877
Query: 367 MIDRMKSAG 375
+ D M G
Sbjct: 878 LYDEMHIRG 886
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 137/308 (44%), Gaps = 29/308 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L +A + + E + GF D + ++V+ LC+ G A K+V+
Sbjct: 157 IDGLCKASKTEKAYELLETLVSS-GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 215
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD-- 286
P L++G C G++DEA + +EM +AY +++ K R K+
Sbjct: 216 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 275
Query: 287 ---------PF---------------RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
P+ RLD E V DM G N++T+N+++ LCK
Sbjct: 276 KVVDGIRGTPYIDVYNALMDGYCKEGRLD-EIPNVFEDMACRGCVPNIKTYNIVMDGLCK 334
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ ++A M GC P+ ++ ++I L++A++ E +++D+M AG
Sbjct: 335 HGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 394
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + + C ER + A+ + + M G +PD+ TY+ L++ NR+ A L E +
Sbjct: 395 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454
Query: 443 RNGVEVKP 450
RNG V
Sbjct: 455 RNGCVVSA 462
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 9/271 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L +A + + M D G D + +++ LC+ G A L+ A
Sbjct: 17 IDGLCKASKTDKASEMLHEM-VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 75
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + LI G C +D AK L E GF V Y+ + D LC++
Sbjct: 76 CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILAD---GLCKRG--- 129
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+D EA +++ +M NG N+ T+N LI LCK ++E A +L + G P+ T+
Sbjct: 130 RID-EAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+++ L + R+ + +M++ M G Y + LC R+++A +F++M +
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
D+ Y L+ +C +R +A + D
Sbjct: 249 KDCTADALAYVSLVNGYCKSSRTKEAQKVVD 279
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 8/240 (3%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++++ LC+ A +++ + + + PD + ++ G C GK + A L M
Sbjct: 15 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 74
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
YN + +S LC++++ R A+ ++ + +G +V T+++L LCK
Sbjct: 75 NCRPSCCTYNTL---ISGLCKQQNVDR----AKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
R ++A +L M GC PN T+ LI L +A++ + E+++ + S+G+
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC R+++A+ + E M G P TY LM C RVD+A+ +F E V
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 29/319 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD------SLRLVVEKLCENGYASYA 218
T S +D L +AG+ FER +++ + ++ LC+ A
Sbjct: 47 TFNSIMDGLCKAGK-------FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99
Query: 219 EKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+ LV + + F PD +L G C G++DEA L +EM G V YN ++D
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDG 159
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ K + + + L L + +G +V T+ +++ LCK R + A+K+ M
Sbjct: 160 LCKASKTEKAYEL-------LETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 212
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ GC P+ T+ L++ L + RV E + M S Y + C R +
Sbjct: 213 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTK 272
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
+A V + ++ P + Y+ LM +C R+D+ +F++ G K Y +
Sbjct: 273 EAQKVVDGIR---GTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 329
Query: 458 RYLKKPIAVKKGKKRETLP 476
L K GK E P
Sbjct: 330 DGL-----CKHGKVDEAFP 343
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 143/317 (45%), Gaps = 23/317 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L +A +P + ++M + G D + ++ + C+ A ++K+
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQ-AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 422
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCRKKDP 287
+ PD+ + LI G +L +A L EM R G + YN I+D +LC+
Sbjct: 423 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIID---RLCK---- 475
Query: 288 FRLDSEAEKVLLDMEY---NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ ++ LL M++ +GV N T+N+ I LCK R ++A L M +
Sbjct: 476 ---EGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RD 529
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSA-GYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
E ++ +I L +A ++ ++ M + G I + + +R+++A+++
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
E M G +P TY++++T C ++VDKA LFDE G+ Y V +
Sbjct: 590 ELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV---LIYGL 646
Query: 464 IAVKKGKKRETLPEKMA 480
+GK+ + E+MA
Sbjct: 647 CGQGRGKEALQVLEEMA 663
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 7/218 (3%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
++ PD ++LI G C K D+A + EM G TV +N I+D LC+
Sbjct: 5 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMD---GLCKAGKF 61
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
R A +L M + T+N LIS LCK + + A L G P+ T
Sbjct: 62 ER----AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVT 117
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +L L + R+ E E++ M G Y + LC + E+A + E +
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G PD TY +++ C R+DKA + + ++ G
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 215
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 11/263 (4%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
++ +H+ L + V T + IDRL + G Q L + M +G + + + + +
Sbjct: 447 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHM-TGHGVEANTVTYNIFI 505
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR-GGFE 265
++LC+ G A L+ + + D+ +I G C +LD A +LAREM G
Sbjct: 506 DRLCKEGRLDEASSLLSEM--DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 563
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+ + +N ++D +K RLD EA +L M G +V T+N++I+ LCK+ +
Sbjct: 564 ITSHTFNLLIDAFTK------TKRLD-EALTLLELMVQRGCSPSVITYNMVITCLCKLDK 616
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+ A +LF M G + ++ VLI L R E ++++ M S+ I +
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676
Query: 386 FLTRLCGIERIEQAMSVFEKMKT 408
L G R E+A + +M T
Sbjct: 677 LYLALRGQGRGEEAAELLRRMTT 699
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 187/473 (39%), Gaps = 50/473 (10%)
Query: 11 RLLLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPF------------------SSKPTSN 52
+ L P HRF+ ++ F +P LNF PF + K + N
Sbjct: 2 KALFLLPKHRFLLSLTSLFHT-NPNPNLNFQRPPFHKLINRPPSYRHWDLPIPTLKQSLN 60
Query: 53 PKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGR 112
P + Q ++ L + + P+ L+ + + P L+Q+ + + +
Sbjct: 61 PNPNPNFSQSDFSTICALLTDPALSSGAPLEDALNR--TGIKPCSGLLQAIFSHFDASPK 118
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD------NKEVLGPKTL 166
+ W + F + + D + + F + ++D E++ T
Sbjct: 119 PLFTLFRWAMKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTF 178
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFK----RDKDS----LRLVVEKLCENGYASYA 218
A I R RAG + FE + F RD+DS +++++ LC+ G+ A
Sbjct: 179 AVLIRRYARAGMTLSAIRTFE-----FAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVA 233
Query: 219 EKLVKDTAN---EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
+ P ++ ++L+ GW KL A++L R M R + V Y +
Sbjct: 234 SEYFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTL- 292
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
V CR R +A +++ +M G+ NV +N +I +L + R ++A+ + R
Sbjct: 293 --VEGYCR----MRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMER 346
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
P +T+ L+K +A + +++ M S G+ Y F +
Sbjct: 347 CLVSETGPTISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGK 406
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
E+ M+++ KM GH PD TY LL+ C R+D A + E G ++
Sbjct: 407 TEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDL 459
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 170 IDRLVRAGRPTQVLGFFER-MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
ID L AGR + +G ER + + G + +V+ C+ G A K++K +
Sbjct: 328 IDSLAEAGRFKEAMGMMERCLVSETG--PTISTYNSLVKGFCKAGDLVGASKVLKMMISR 385
Query: 229 IF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
F P + + + GK +E L +M G + Y+ + + +C ++
Sbjct: 386 GFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLL---IKMMCEEE-- 440
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RLD A +V +M G ++ T +L+ LCK+ R E+A F M G P T
Sbjct: 441 -RLDL-AVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLT 498
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
F + +L + ++ D M S ++
Sbjct: 499 FERMNNALRKRGLTEMARKLCDMMASVPHS 528
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 137/290 (47%), Gaps = 13/290 (4%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD +G P +A + ID L + R FF+ +ER G + + + +V L
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGL 235
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C + S A +L+ D + I P+ L+ + +GK+ EAK L EM R +
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y+ + V+ LC R+D EA ++ M G +V ++N LI+ CK +R ED
Sbjct: 296 VTYSSL---VNGLCLHD---RID-EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+KLF M + G N T+ LI+ +QA V + E +M G + Y L
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LC +E+A+ +FE M+ + D TY ++ C +V++A +LF
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 44/304 (14%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
+V+ + V+ ++ME G + D + +V+ C S A ++ + P
Sbjct: 95 IVKLKKYDVVISLGKKMEV-LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEP 153
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D L+ G+C ++ +A L +M G++ VAYN I+D + K R D F
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL------------------- 332
E E+ G+ NV T+ L++ LC R DA +L
Sbjct: 214 KEIER-------KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 333 ----------------FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
F M P+ T+ L+ L R+ E ++M D M S G
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGC 326
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + C +R+E M +F +M G ++ TY+ L+ + VDKA
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 437 LFDE 440
F +
Sbjct: 387 FFSQ 390
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
D KL++A L +M + V +N +L + KL + L + ME G
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKK-------MEVLG 115
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ ++ TFN++I+ C + A+ + +M + G P+ T L+ + RV +
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++D+M GY Y + LC +R+ A F++++ G P+ TY L+
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 426 CAHNRVDKA-------------------NALFDEAVRNGVEVKPKE 452
C +R A +AL D V+NG ++ KE
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 140/348 (40%), Gaps = 48/348 (13%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+ +LV+ L G F W + +F+H+ E+ + G K F + DFL+
Sbjct: 67 SSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLI 126
Query: 156 DNKEV----LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ +E + K RA P++ F RM ++G K D L ++ LC+
Sbjct: 127 EAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMV-EFGIKPCVDDLDQLLHSLCD 185
Query: 212 NGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ ++A++ K I P K +L++GW A+++ EM +
Sbjct: 186 KKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEM---------LE 236
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
NC++D ++ +N L+ LCK +
Sbjct: 237 RNCVVDLLA---------------------------------YNALLDALCKSGDVDGGY 263
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
K+F MG G P+ +F + I + A V +++DRMK + + L
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 323
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
C E+++ A + ++M G NPD+ TY+ +M C H V++A L
Sbjct: 324 CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ + +T+++L+ +IR + A K+F M E C + + L+ +L ++ V G
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+M M + G + F+ C + A V ++MK P+ T++ ++
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 425 WCAHNRVDKANALFDEAVRNG 445
C + +VD A L DE ++ G
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKG 343
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 78/196 (39%), Gaps = 11/196 (5%)
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
L SEA + M G+ V+ + L+ +LC + A + F + +G P+ T+
Sbjct: 153 LPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYS 212
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+L++ + ++ D M + Y L LC ++ +F++M
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR-----------NGVEVKPKEYRVDPR 458
G PD+ ++ + + +C V A + D R + ++ K +VD
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 459 YLKKPIAVKKGKKRET 474
YL ++KG +T
Sbjct: 333 YLLLDEMIQKGANPDT 348
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 54/152 (35%), Gaps = 2/152 (1%)
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
EYN + + F ++ + +A + F RM E+G P L+ SL V
Sbjct: 130 EYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHV 189
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E + K G K Y + I A VF++M D Y+ L
Sbjct: 190 NHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNAL 249
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ C VD +F E G +KP Y
Sbjct: 250 LDALCKSGDVDGGYKMFQEMGNLG--LKPDAY 279
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 14/283 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM---ERDYG--FKRDKDSLRLVVEKLCENGYASYAE 219
TL I+ L ++ R + L FE+M D G K D +++ LC+ G AE
Sbjct: 331 TLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 220 KLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+L+ E P+ + LI G+C GKL+ AK + M G + V N I
Sbjct: 391 ELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTI--- 447
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
V +CR + A +DME GV NV T+ LI C + E A+ F +M
Sbjct: 448 VGGMCRHHGL----NMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKML 503
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E GC P+ + LI L Q R + ++++++ G+++ Y + C E
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + M+ +G PDS TY+ L++ + H + + ++
Sbjct: 564 KVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 19/291 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
L SC+ R + GR ++ + M+ + D +L +++ LC++ A ++ +
Sbjct: 299 ALLSCLGRNMNIGRMNALVLKMDEMK----IRPDVVTLGILINTLCKSRRVDEALQVFEQ 354
Query: 224 ------DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILD 276
D N I D + LI G C G+L EA+ L M + TV YNC++D
Sbjct: 355 MCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCVPNTVTYNCLID 414
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
CR +L++ A++V+ M+ +G+ +V T N ++ +C+ A+ F M
Sbjct: 415 ---GYCRAG---KLET-AKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDM 467
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ G N T++ LI + + + + D+M AG + K YY ++ LC + R
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
A+ V EK++ G + D Y++L+ +C N +K + + + G++
Sbjct: 528 HDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMK 578
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 93/221 (42%), Gaps = 14/221 (6%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD KI LI G C + +A R+ ++ GGF L +AYN + + C K +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNML---IGLFCDKNN---- 561
Query: 291 DSEAEKV---LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
AEKV L DME G+ + T+N LIS K + E ++ +M E P T
Sbjct: 562 ---AEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVAT 618
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR-LCGIERIEQAMSVFEKM 406
+ +I++ +GE ++ M Y L + QA+S+ E+M
Sbjct: 619 YGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
K P+ ETY+ L N+ + L DE V E
Sbjct: 679 KMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCE 719
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCRKK 285
+E+ P +I+ +C G+L EA +L ++M R TV YN +++ SKL
Sbjct: 610 DELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFG 669
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
L E M+ V NVET+N L L + ++E +KL M E C PN+
Sbjct: 670 QALSLKEE-------MKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQ 722
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMK-SAGYAIG 379
T +L++ R+ DE++ K GY++
Sbjct: 723 ITMEILME------RLSGSDELVKLRKFMQGYSVA 751
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 154/348 (44%), Gaps = 32/348 (9%)
Query: 135 SFFTDYF--GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
S ++F GR++D I+ +++ + L + +D + +AG P + FE + +
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-KA 545
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDE 251
F D S +++ L + G+A+ +L + D + +++I G+C GK+++
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK--------------- 296
A +L EM GFE V Y ++D ++K+ R + + L EA+
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 297 -------------VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+L ++ G+ N+ T+N L+ L K +A+ F M E C P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N+ T+ +LI L + + + M+ G Y ++ L I +A ++F
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
++ K +G PDS Y+ ++ NR A +LF+E R G+ + K
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 135/336 (40%), Gaps = 38/336 (11%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-N 227
CID + G+ FF +E + G K D+ + ++ LC+ A ++ + N
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P + +I G+ GK DEA L G +AYNCIL C+ K+ + +
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 288 FRLDSEAEK----------VLLDM-----------------EYNGVPRNVETFNVLISNL 320
++ E +K +L+DM + G+ NV T N+++ L
Sbjct: 363 LKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK ++ ++A +F M C P+E TF LI L + RV + ++ ++M +
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + R E +++ M +PD + + M +K A+F+
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE- 541
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPI--AVKKGKKRET 474
E+K + + D R I +K G ET
Sbjct: 542 ------EIKARRFVPDARSYSILIHGLIKAGFANET 571
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 144/350 (41%), Gaps = 46/350 (13%)
Query: 163 PKTLA-SCIDRLVR-AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
P +A +CI +R G+ + L FE M++D + + ++++ LC G A +
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA--PNLSTYNILIDMLCRAGKLDTAFE 398
Query: 221 LVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
L +D+ + +FP+ + ++++ C KLDEA + EM + + ++D +
Sbjct: 399 L-RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 279 SKLCRKKDPFR-----LDSE-----------------------AEKVLLDMEYNGVPRNV 310
K+ R D ++ LDS+ K+ DM ++
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+ N + + K E +F + P+ ++ +LI L +A E E+
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
MK G + + Y + C ++ +A + E+MKT G P TY ++ +R
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 431 VDKANALFDEAVRNGVEVKPKEY-----------RVDPRYLKKPIAVKKG 469
+D+A LF+EA +E+ Y R+D YL ++KG
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 108/277 (38%), Gaps = 9/277 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P+ + + RL R + ++ER +SL LV+ + C N + + + L
Sbjct: 65 PEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMAR-CRN-FDALDQILG 122
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + P C ++ G KL E + + M + F AY ++ S +
Sbjct: 123 EMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN 182
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
L + +++ G V F LI K R + A+ L M
Sbjct: 183 HSDMMLTLFQQMQEL-------GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
+ + V I S + +V + +++ G + Y + LC R+++A+ +
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEM 295
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
FE ++ + P + Y+ ++ + + + D+A +L +
Sbjct: 296 FEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 66/150 (44%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P E++N L+ + + R + ++ M G P+ T + ++ +A ++ EG
Sbjct: 94 LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGY 153
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+++ M+ + Y + + + +++F++M+ G+ P + L+ +
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
RVD A +L DE + ++ Y V
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 167/400 (41%), Gaps = 21/400 (5%)
Query: 48 KPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFS 107
K T++P + +VI + L N+EA + + SH LV L
Sbjct: 68 KSTADPAEVHKVCKVIDELFA--LDHNMEA----VLDECGINLSH-----DLVIEVLERF 116
Query: 108 PEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKT 165
A + F W + F H T + + F+ + L + K +L T
Sbjct: 117 RHARKPAFRFFCWAAEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRLLTLDT 176
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
+ + A + +G FE M +++ ++ +++ +++ L A+ L
Sbjct: 177 FSIAMRAFAAAKERKKAVGIFELM-KNHKYRVGVETINALLDSLGRAKLGKEAQALFGKL 235
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
P+ + +L+ GWC L EA R+ EM GF+ V +N +L+ L R K
Sbjct: 236 EGRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLE---GLLRSK 292
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
S+A K M+ G +V ++ +LI +LCK + ++A+ FY M + GCHP+
Sbjct: 293 KR----SDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDA 348
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ L+ R+ E++ MK G K Y + + + A+ +++K
Sbjct: 349 AVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKK 408
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M +G P +Y+++M + + +A++DE + G
Sbjct: 409 MIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKG 448
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 41/301 (13%)
Query: 144 RKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMER------------ 191
RK I + + ++K +G +T+ + +D L RA + F ++E
Sbjct: 190 RKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVL 249
Query: 192 ---------------------DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEI 229
D GFK D + +++E L + S A K + A
Sbjct: 250 LNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGP 309
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD + +LI+ C K+ EA EM G Y C++ + R
Sbjct: 310 SPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYG------NHKR 363
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+D E +L +M+ G P + +T+N LI + R +DA++++ +M + G P+ ++
Sbjct: 364 MDMVYE-LLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYN 422
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+++KS ++ G + D M G+ Y F+ L R E+A E+M
Sbjct: 423 MIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEK 482
Query: 410 G 410
G
Sbjct: 483 G 483
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 103/242 (42%), Gaps = 9/242 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
++ L+R+ + + + FFE M + G D S +++ LC+ A + +
Sbjct: 285 LEGLLRSKKRSDAIKFFEVM-KAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSG 343
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + L+ G+ ++D L +EM G YN ++ ++
Sbjct: 344 CHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQ------- 396
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+ +A ++ M NG+ ++ ++N+++ + +IR E ++ M + G P++ ++
Sbjct: 397 RMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSY 456
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
V I L R E + ++ M G + DY +F + + + +KMK
Sbjct: 457 TVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELAQKMKF 516
Query: 409 DG 410
G
Sbjct: 517 SG 518
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 159/383 (41%), Gaps = 16/383 (4%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+ +LV+ L G + F W + F H++E+ + G + F + DFL+
Sbjct: 77 STNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEESYHILVNILGTSRQFAILWDFLI 136
Query: 156 DNKEV----LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ +E + + + RA P+ + F+RM ++G + D L ++ LC+
Sbjct: 137 EMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMA-EFGLRPSVDDLDKLLYVLCK 195
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
+ A++ ++ K +L++GW G+ EA+++ EM G L +AY
Sbjct: 196 CKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAY 255
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N +L+ LC+ + EA K+ ++ +GV + ++ + I C+
Sbjct: 256 NSLLE---ALCKGGNV----DEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFS 308
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+ RM + PN T+ +IK L + +V + +++ M G + Y L C
Sbjct: 309 VLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHC 368
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+ +A + M D PD +Y++L+ R D+A +++ G
Sbjct: 369 EHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVS 428
Query: 452 EYRVDPRYLKKPIAVKKGKKRET 474
Y V L K KKGK E
Sbjct: 429 TYSVMIHGLCK----KKGKLEEA 447
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 130/279 (46%), Gaps = 9/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+DR VR R + + +M GF+ D + +++ C+ G A +++KD +
Sbjct: 267 LDRAVRNSRVVEAEEYLRKMVNG-GFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG 325
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PD+ LI G+C DG D A + ++ G V YN ++ +S+
Sbjct: 326 FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQ------- 378
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L A +++ +M NG N+ T+N++I+ LCK+ DA L GC P+ T+
Sbjct: 379 GLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTY 438
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + ++ EM++RM S G Y L LC + E+ M +F+ M+
Sbjct: 439 NTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE 498
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G P+ TY++++ C +V++A L E G++
Sbjct: 499 KGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 136/296 (45%), Gaps = 16/296 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL---VVEKLCENGYASYAEKL 221
T S I+ + G P + + F +D K + S+ L +++ L + G A +L
Sbjct: 332 TYCSLINGFCKDGDPDRAMAVF----KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387
Query: 222 VKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ + A N P+ +L+I G C G + +A L + G YN ++D K
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+LDS E V M G+ +V T+N L++ LCK +SE+ +++F M E G
Sbjct: 448 ------QLKLDSATEMVN-RMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG 500
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN T+ +++ SL +A +V E +++ MKS G + T C I I+ A
Sbjct: 501 CTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAY 560
Query: 401 SVFEKM-KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+F +M K + TY+++++ + ++ A LF +G + YRV
Sbjct: 561 QLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRV 616
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 18/278 (6%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV---KDTANEIFPDDKI 235
P + L F + + GFK + + +V+KL +G EKL+ ++ N +
Sbjct: 20 PLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAY 79
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ + K + GK+ EA M + ++N I++ + + F ++A
Sbjct: 80 IEAM-KNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVE-------FGYHNQAH 131
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
KV + M GV +V T+ + I + CK R A++L M E GC N + ++ L
Sbjct: 132 KVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGL 191
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
Y + E+ D M + + + + LC + ++ + K+ G P+
Sbjct: 192 YDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNL 251
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
T+++ + C +D+ AVRN V+ +EY
Sbjct: 252 FTFNIFVQGLCREGALDR-------AVRNSRVVEAEEY 282
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 103/280 (36%), Gaps = 65/280 (23%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ LV+ LC+ G S A LV D A PD + LI G+C KLD A + M
Sbjct: 402 TYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRM 461
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRL--------------------DS------- 292
+ G + YN +L+ + K + ++ + DS
Sbjct: 462 WSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKV 521
Query: 293 -EAEKVLLDMEYNGVPRNVETFNVLISNLCKI----------RRSED------------- 328
EA +L +M+ G+ +V +F L + CKI RR E
Sbjct: 522 NEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNI 581
Query: 329 -------------AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
A+KLF M GC P+ T+ V+I + + +G + +
Sbjct: 582 IVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR 641
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + L LC +++ +A+ + M G P++
Sbjct: 642 FIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET 681
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 135/281 (48%), Gaps = 9/281 (3%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDK 234
+G+P + +G ++M D G + + + ++ LC+NG ++ A K+ T + PD
Sbjct: 257 SGQPKEAIGTLKKMRSD-GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
L++G C +G++ E+++L M R G + + YN ++D L K D EA
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC-LAGKMD------EA 368
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
K+L M GV ++ T+ LI+ C++ R +DA+ LF M G PN T+ ++++
Sbjct: 369 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L+ R E+ + +G + Y L LC ++A+ +F+ + +
Sbjct: 429 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 488
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ T+++++ R+D+A LF NG+ + Y +
Sbjct: 489 TRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 529
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+D+A + M + G + YN IL C P EA L M +GV
Sbjct: 225 MDKAMEVLNTMVKNGVMPDCMTYNSIL---HGYCSSGQP----KEAIGTLKKMRSDGVEP 277
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV T++ L++ LCK RS +A K+F M + G P+ T+ L++ + RV E +++
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF 337
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
D M G Y + C ++++A + M + G PD TY L+ +C
Sbjct: 338 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 397
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRV 455
+R+D A ALF E V +GV Y +
Sbjct: 398 SRMDDALALFKEMVSSGVSPNIITYNI 424
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 9/288 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S ++ L + GR T+ F+ M + G + D + R +++ C+ G +EKL
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTK-RGLEPDIATYRTLLQGHCKEGRVIESEKLFDL 339
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + LI G C+ GK+DEA +L M G + V Y +++ ++ R
Sbjct: 340 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 399
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D L E M +GV N+ T+N+++ L RR+ A +L+ + + G
Sbjct: 400 MDDALALFKE-------MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 452
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+T+ +++ L + E M + + + + + L R+++A +F
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 512
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+G PD TY L+ +++ + LF NG +
Sbjct: 513 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 560
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 7/229 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD + ++ G+C G+ EA ++M G E V Y+ +++ + K R
Sbjct: 238 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS-- 295
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+EA K+ M G+ ++ T+ L+ CK R ++ KLF M G P+
Sbjct: 296 -----TEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDII 350
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI A ++ E +++ M S G Y + C + R++ A+++F++M
Sbjct: 351 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 410
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ G +P+ TY++++ R A L+ ++G +++ Y +
Sbjct: 411 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 459
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 12/163 (7%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYR-MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
TF L+ LC +R+ DA+ + R M E GC P+ ++ L+K L R E E++
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 371 MKSAGYAIGKKDYYEFLTRLCGI-----------ERIEQAMSVFEKMKTDGHNPDSETYD 419
M D + T L G + +++AM V M +G PD TY+
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYN 248
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
++ +C+ + +A + +GVE Y YL K
Sbjct: 249 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 291
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG- 364
V V T+ +LI C+ R + + + G + TF L+K L R +
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD---GHNPDSETYDLL 421
D ++ RM G Y L LC R ++A+ + M D G PD +Y+ +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 422 M---------TKWCAHNRVDKANALFDEAVRNGV 446
+ TK A +DKA + + V+NGV
Sbjct: 208 LNGFFKEGIQTKLTAQ-AMDKAMEVLNTMVKNGV 240
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 164/372 (44%), Gaps = 53/372 (14%)
Query: 117 FNHWLTQNAN-FSHTDETLSFFTDYFGRRKDFKAIH---DFLVDNKEVLGPKTLASCIDR 172
F +W ++ + + + + D G+ + F+ +H D + +E+L A+ + R
Sbjct: 87 FFNWASKTTTGYQPSSDVCNEIVDILGKMQRFQELHQVLDEMSKREELLDEAVFATLVRR 146
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
V A + + + F R +++G + + ++ R ++ LC + AE L ++ + +
Sbjct: 147 FVGAHKVDEAIQLFYR-RKEFGLELNSEAFRTLLMWLCRYKHVEDAEALFHNSVKKGLRA 205
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLARE-------------------------------MY 260
D K+ ++++ GWCV G EAKR+ R+ ++
Sbjct: 206 DIKMWNVILNGWCVLGNSHEAKRVWRDIVASPCKPDIFTYATFIKALTKKGKLGTALKLF 265
Query: 261 RGGFELG----TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
RG ++ G V NCI+D LC KK EA ++ DM G NV T+N L
Sbjct: 266 RGMWDKGGKPDVVICNCIID---ALCFKKRI----PEALEIFCDMSERGCEPNVATYNSL 318
Query: 317 ISNLCKIRRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
I +CKI+R + +L M + C PN T+ L+KSL + GE +++RM+
Sbjct: 319 IKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYCYLLKSLKEP---GEVCRVLERMERN 375
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G + Y L + + +E+M+ +G PD +Y +++ + RV A
Sbjct: 376 GCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEMERNGWGPDRRSYTIMIHENFEKGRVKDA 435
Query: 435 NALFDEAVRNGV 446
+E + G+
Sbjct: 436 VRYLEEMISKGM 447
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 45/252 (17%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D+ + L++ + K+DEA +L G EL + A+ +L LCR K
Sbjct: 136 DEAVFATLVRRFVGAHKVDEAIQLFYRRKEFGLELNSEAFRTLL---MWLCRYKHV---- 188
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+AE + + G+ +++ +NV+++ C + S +A +++ + C P+ T+
Sbjct: 189 EDAEALFHNSVKKGLRADIKMWNVILNGWCVLGNSHEAKRVWRDIVASPCKPDIFTYATF 248
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
IK+L + ++G A+ +F M G
Sbjct: 249 IKALTKKGKLG-----------------------------------TALKLFRGMWDKGG 273
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
PD + ++ C R+ +A +F + G E Y +Y+ K ++ KK
Sbjct: 274 KPDVVICNCIIDALCFKKRIPEALEIFCDMSERGCEPNVATYNSLIKYMCKI---QRMKK 330
Query: 472 RETLPEKMARKR 483
L ++M RK+
Sbjct: 331 VYELVDEMERKK 342
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 144/353 (40%), Gaps = 12/353 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
PS+V L + +A+ F+ W T + H+ T + F R+K + +D
Sbjct: 98 VPSVVGRVLQQLDDLDKAVKFFD-WCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFK 156
Query: 156 DNKEVLGPK---TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+++ L T ++ I+ +A Q + ME+ G +++ LC+N
Sbjct: 157 NHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK-RGIVPHNAVYNTIIKGLCDN 215
Query: 213 GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
G A +D P +L+ C ++ +A + +M G V YN
Sbjct: 216 GRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYN 275
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+++ KL EA + M N +V T+N+LI CK R +D KL
Sbjct: 276 TLINGFCKLGNM-------DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 328
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M ++GC PN T+ L+ SL ++ + + + M + + C
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ +++ A +F+ M G PD TY+++++ C NR+D A L + G
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 441
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 30/329 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
+D L ++ R + E M + G + + ++ C+ G A L N
Sbjct: 243 VDALCKSARISDASLILEDM-IEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD ++LI G+C + + +L +EM + G E + YN ++D + K + D F
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361
Query: 289 RL--------------------DSEAEKVLLDMEYN--------GVPRNVETFNVLISNL 320
L D + LD+ Y G ++ T+N++IS
Sbjct: 362 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 421
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C+ R +DA +L RM E GC P+ T+ ++ L +A++V E E+ + +++ GY +
Sbjct: 422 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ LC R++ A + +M+ +G PD Y +L+ +C +++DK+ A F E
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+ G Y + L K V+ G
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDG 570
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID + G+ F+ M D G D + +++ C A +L++
Sbjct: 383 IDMFCKVGQLDLAYELFQLMT-DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 441
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P D + + ++ G C ++DEA + + GG+ L V + ++D LC+ +
Sbjct: 442 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID---GLCKSR--- 495
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RLD +AEK+L +ME NG +V + +LI CK + + ++ F M + GC P T+
Sbjct: 496 RLD-DAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 554
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++I L ++ARV +G ++ M G Y + LC + ++A +++ MK
Sbjct: 555 SIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P TY++L+ K C +R+D+A L + +G
Sbjct: 615 TGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDG 651
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 137/291 (47%), Gaps = 9/291 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + L +A + + +E + R+ G+ D + +++ LC++ AEKL+++
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVL-RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 506
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N PD +LI G+C +LD++ EM G + Y+ ++D + K R
Sbjct: 507 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 566
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D L L M GV + + +I LCK ++A +L+ M + GC P
Sbjct: 567 VRDGCML-------LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAP 619
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ VL+ L + +R+ E +++ M+S G Y ++A +F
Sbjct: 620 TVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLF 679
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ MK+ G +P Y LL+TK A ++D+A +++EA+ G +V P+ R
Sbjct: 680 QAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISR 730
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C+ L+ + K EA L + G ++ Y+ + ++ C+ +D F+ +A
Sbjct: 135 CNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTL---INGFCKARD-FQ---QAY 187
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++L +ME G+ + +N +I LC R + A+ + YR + C P+ T+ +L+ +L
Sbjct: 188 RLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRNCAPSVITYTILVDAL 246
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++AR+ + +++ M AG A Y + C + +++A+ +F +M + +PD
Sbjct: 247 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDV 306
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY++L+ +C R L E V+ G E
Sbjct: 307 FTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 338
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 13/290 (4%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD +G P +A + ID L + R L FF+ + R G + + + +V L
Sbjct: 177 LVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK-GIRPNVVTYTALVNGL 235
Query: 210 CENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C +G + A +L++D +I P+ L+ + +GK+ EAK + EM R +
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y+ + ++ LC R+D EA ++ M G +V ++N LI+ CK +R ED
Sbjct: 296 VTYSSL---INGLCLHD---RID-EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVED 348
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+KLF +M + G N T+ LI+ +Q V + E +M S G + Y L
Sbjct: 349 GMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLG 408
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LC +E+A+ +FE M+ + D TY ++ C +V+ A LF
Sbjct: 409 GLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLF 458
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 137/290 (47%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ S ++ R R + + ++M + G++ D + +++ LC+ + A K+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMV-EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKE 215
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I P+ L+ G C G+ ++A RL R+M + + Y+ +LD K +
Sbjct: 216 IGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGK 275
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
EA+++ +M + ++ T++ LI+ LC R ++A ++F M GC P
Sbjct: 276 VL-------EAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFP 328
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ LI +A RV +G ++ +M G Y + + +++A F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF 388
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+M + G +PD TY++L+ C + ++KA +F++ ++ +++ Y
Sbjct: 389 SQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTY 438
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 135/311 (43%), Gaps = 16/311 (5%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCID------RLVRAGRPTQVLGFFERMERDYGFK 196
R +D K +HD + +E++ + S +D +V+ + V+ ++ME G +
Sbjct: 60 RLRDIK-LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEV-LGIR 117
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRL 255
D + +V+ C S A ++ + PD L+ G+C ++ +A L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
+M G+ VAYN I+D + K R D E + G+ NV T+
Sbjct: 178 VDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGR-------KGIRPNVVTYTA 230
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L++ LC R DA +L M + PN T+ L+ + + +V E E+ + M
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC +RI++A +F+ M + G PD +Y+ L+ +C RV+
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350
Query: 436 ALFDEAVRNGV 446
LF + + G+
Sbjct: 351 KLFRKMSQRGL 361
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 26/226 (11%)
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
D KL +A L REM + V +N +L + K+ + L + ME G
Sbjct: 63 DIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKK-------MEVLG 115
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ ++ TFN++I+ C + A+ + +M + G P+ T L+ + RV +
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++D+M GY Y + LC R+ A+ F+++ G P+ TY L+
Sbjct: 176 SLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGL 235
Query: 426 CAHNRVDKA-------------------NALFDEAVRNGVEVKPKE 452
C R + A +AL D V+NG ++ KE
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKE 281
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 124/290 (42%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + I+ + GR + L E M+ G K + + +V+ C G A L+ K
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLR-GCKPNVWTYNALVQGFCNEGKVHKAMTLLNK 384
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + PD +LLI+G C+DG ++ A RL R M G YN +++ + K R
Sbjct: 385 MRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 444
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+A + +E G+ N TFN LI+ LCK +++ A K +M GC P
Sbjct: 445 T-------DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTP 497
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ I+ L + EG I M +Y + +L +
Sbjct: 498 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTW 557
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+M + G NPD TY M +C R+++A + E +NGV V Y
Sbjct: 558 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 607
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF +D S ++E LCE G A +L + PD + L+KG C + +E
Sbjct: 218 GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ---PDMHMYAALVKGLCNAERGEEGL 274
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ R M G+ T AY ++D CR+ R EAE++L +M G+ V T
Sbjct: 275 LMLRRMKELGWRPSTRAYAAVVD---FRCRE----RKAKEAEEMLQEMFEKGLAPCVVTC 327
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+I+ CK R DA+++ M GC PN T+ L++ +V + ++++M++
Sbjct: 328 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 387
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + C IE A + M+ DG D TY+ L+ C R D+
Sbjct: 388 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 447
Query: 434 ANALFDEAVRNGVE 447
A +LFD G++
Sbjct: 448 ACSLFDSLETRGIK 461
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 114/293 (38%), Gaps = 12/293 (4%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+ AS + L R L F M R + V+ LC + A + +
Sbjct: 118 RPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLS 177
Query: 224 DTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ PD + LI G+C ++D A+ L +M GF V+Y +++ + +
Sbjct: 178 LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAG 237
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R + L E ++ + M + L+ LC R E+ + + RM E G
Sbjct: 238 RIDEAVELFGEMDQPDMHM-----------YAALVKGLCNAERGEEGLLMLRRMKELGWR 286
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ + ++ + + E +EM+ M G A + C R+ A+ V
Sbjct: 287 PSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRV 346
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E MK G P+ TY+ L+ +C +V KA L ++ GV Y +
Sbjct: 347 LELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 399
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 119/290 (41%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A+ + L A R + L RM ++ G++ + VV+ C A AE+++++
Sbjct: 258 AALVKGLCNAERGEEGLLMLRRM-KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMF 316
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ + P C +I +C +G++ +A R+ M G + YN + V C +
Sbjct: 317 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL---VQGFCNEG 373
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ A +L M GV + T+N+LI C E A +L M G ++
Sbjct: 374 KVHK----AMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 429
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI +L + R + + D +++ G + + LC + + A EK
Sbjct: 430 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEK 489
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M + G PD+ TY + C + + E ++ V+ Y +
Sbjct: 490 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 539
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 122/327 (37%), Gaps = 47/327 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + I+ L + GR Q F+ +E G K + + ++ LC++G A A K + K
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKFLEK 489
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL-------- 275
+ PD I+ C E EM + + TV Y ++
Sbjct: 490 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 549
Query: 276 ---------DCVSKLCRKKDPFRLDS-----------EAEKVLLDMEYNGVPRNVETFNV 315
+ VS C S EAE VL++M NGV + +N
Sbjct: 550 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 609
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL-----------------YQA 358
L+ I +++ A+ + +M PN+ T+ +L++ L ++A
Sbjct: 610 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 669
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + + D MK + Y L R E+A S+ MK D + + + Y
Sbjct: 670 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 729
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+T +C R A L +++G
Sbjct: 730 TALVTCFCKSKRYLDAWVLVCSMIQHG 756
>gi|359474405|ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g47360-like [Vitis vinifera]
Length = 638
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 148/347 (42%), Gaps = 19/347 (5%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDN 157
SL QS L L F W + + H+ S + F ++ +AI D +
Sbjct: 66 SLTQSQLG---------LRFFIWAGVQSYYRHSSYLYSKACELFRINQNPRAIIDVIEAY 116
Query: 158 K---EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY 214
+ V+ KT + L A + L ++M ++ + D + V+ CE G
Sbjct: 117 RVEGTVVSVKTFNVVLHLLREAKLADEALWILKKMA-EFNIRADTVAYNSVIRLFCEKGD 175
Query: 215 ASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
A L+K+ +++P+ +IKG+C G+L++A +L + M G V Y
Sbjct: 176 MDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGRLEDACKLFKVMKGHGCSPNVVVYTV 235
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
ILD V + + L E EK E NV T+ +I + C+ + +A+++
Sbjct: 236 ILDGVCRFGSLERALELLGEMEK-----ESGDCSPNVVTYTSMIQSCCEKGKLMEALEIL 290
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
RM GC PN T +L+K RV E ++ID++ + G + Y + L G
Sbjct: 291 DRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVAGGNVSYGECYSSLIVSLVGN 350
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ +++A +F +M + PD L+ C RV LFDE
Sbjct: 351 KNLQEAEKLFRRMLANAVKPDGLACGTLIKALCLEGRVLDGFHLFDE 397
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 279 SKLCRKKDPFRLDSEAEKVLLDME---YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
SK C + FR++ ++ +E G +V+TFNV++ L + + +++A+ + +
Sbjct: 94 SKAC---ELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKK 150
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E+ + + +I+ + + ++ M Y + C + R
Sbjct: 151 MAEFNIRADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGR 210
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+E A +F+ MK G +P+ Y +++ C +++A L E + + P
Sbjct: 211 LEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSP 265
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 15/284 (5%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
P A+ I +L +GR + E D + +V C G A +L
Sbjct: 93 APGPCAALIKKLCASGRTAEARRVLAACEPDV------MAYNAMVAGYCVTGQLDAARRL 146
Query: 222 VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
V D E PD + LI+G C G+ A + +M R G V Y +L+ K
Sbjct: 147 VADMPME--PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKR 204
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
K +A K+L +M G ++ T+NV+++ +C+ R +DAI+ + GC
Sbjct: 205 SGYK-------QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGC 257
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN ++ +++K L A R + ++++ M GY + ++ LC +E AM
Sbjct: 258 EPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAME 317
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
V +++ G P+S +Y+ ++ +C ++D+A A + V G
Sbjct: 318 VLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-NGYASYAEKLVK 223
T + I L GR L + M R G D + +++E C+ +GY + L +
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDMLRR-GCVPDVVTYTILLEATCKRSGYKQAMKLLDE 216
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A PD ++++ G C +G++D+A + + G E TV+YN +L + R
Sbjct: 217 MRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAER 276
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D AEK++ +M G P NV TFN+LIS LC+ E A+++ ++ ++GC P
Sbjct: 277 WED-------AEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ ++ + + ++ ++ M S G Y LT LC ++ A+ +
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL 389
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++K G P +Y+ ++ + +A L +E V G++
Sbjct: 390 HQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQ 433
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 146/313 (46%), Gaps = 11/313 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + + GR + F + + +G + + S +V++ LC AEKL+ + + +
Sbjct: 233 VNGICQEGRVDDAIEFLKSLP-SHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKG 291
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+P + + ++LI C G ++ A + ++ + G +++YN IL C++K
Sbjct: 292 YPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILH---AFCKQK--- 345
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D V L M G ++ ++N L++ LC+ + A++L +++ + GC P ++
Sbjct: 346 KMDRAMAFVEL-MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISY 404
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L +A + E E+++ M + G Y + LC +RIE+A+ F K++
Sbjct: 405 NTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQD 464
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
G P++ Y+ ++ C A LF + NG Y + L VK+
Sbjct: 465 MGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKE 524
Query: 469 GKKRETLPEKMAR 481
RE L E +R
Sbjct: 525 A--RELLGELCSR 535
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC---- 236
+ + F E M G D S ++ LC G A +L+ DK C
Sbjct: 349 RAMAFVELMV-SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL------KDKGCTPVL 401
Query: 237 ---DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ +I G GK EA L EM G + + Y+ I S LCR+ R++ E
Sbjct: 402 ISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTI---SSGLCRED---RIE-E 454
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A + ++ G+ N +N ++ LCK R + +AI LF M GC PNE+T+ +LI+
Sbjct: 455 AIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIE 514
Query: 354 SLYQAARVGEGDEMIDRMKSAG 375
L V E E++ + S G
Sbjct: 515 GLTYEGLVKEARELLGELCSRG 536
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 19/274 (6%)
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
L N ++A V + N + P + + ++G G L+EA RL M G E
Sbjct: 36 LTPNSRLNFAHAGVAASPNAV-PHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSA 92
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
C + KLC +EA +VL E +V +N +++ C + +
Sbjct: 93 APGPCA-ALIKKLCASGR----TAEARRVLAACE-----PDVMAYNAMVAGYCVTGQLDA 142
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A +L M P+ T+ LI+ L R G ++D M G Y L
Sbjct: 143 ARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLE 199
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
C +QAM + ++M+ G PD TY++++ C RVD A +G E
Sbjct: 200 ATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEP 259
Query: 449 KPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
Y + LK ++ + E L +M++K
Sbjct: 260 NTVSYNI---VLKGLCTAERWEDAEKLMAEMSQK 290
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 13/290 (4%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD +G P +A + ID L + R FF+ +ER G + + + +V L
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGL 235
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C + S A +L+ D + I P+ L+ + +GK+ EAK L EM R +
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y+ + ++ LC R+D EA ++ M G +V ++N LI+ CK +R ED
Sbjct: 296 VTYSSL---INGLCLHD---RID-EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+KLF M + G N T+ LI+ +QA V + E +M G + Y L
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LC +E+A+ +FE M+ + D TY ++ C +V++A +LF
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 117/304 (38%), Gaps = 44/304 (14%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
+V+ + V+ ++ME G + D + +V+ C S A ++ + P
Sbjct: 95 IVKLKKYDVVISLGKKMEV-LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEP 153
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D L+ G+C ++ +A L +M G++ VAYN I+D + K R D F
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL------------------- 332
E E+ G+ NV T+ L++ LC R DA +L
Sbjct: 214 KEIER-------KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 333 ----------------FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
F M P+ T+ LI L R+ E ++M D M S G
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + C +R+E M +F +M G ++ TY+ L+ + VDKA
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 437 LFDE 440
F +
Sbjct: 387 FFSQ 390
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
D KL++A L +M + V +N +L + KL + L + ME G
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKK-------MEVLG 115
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ ++ TFN++I+ C + A+ + +M + G P+ T L+ + RV +
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++D+M GY Y + LC +R+ A F++++ G P+ TY L+
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 426 CAHNRVDKA-------------------NALFDEAVRNGVEVKPKE 452
C +R A +AL D V+NG ++ KE
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + R L F+++ GF+ + + ++ LC+N + ++A ++
Sbjct: 154 TFTSLLHGFCHWNRIEDALALFDQIV-GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQ 212
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N I P+ + L+ G C G+ +A L R+M + G + + + ++D K+ +
Sbjct: 213 MGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGK 272
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ E KV++ M V +V T+ LI+ LC R ++A ++FY M G +P
Sbjct: 273 IMEA----KELYKVMIQMS---VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYP 325
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
NE T+ LI ++ RV +G ++ M G Y + C + R + A VF
Sbjct: 326 NEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M + PD TY++L+ C + V+KA +F + +++ Y +
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTI 437
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 9/275 (3%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLI 240
V+ FE+M+ G + +V+ +C + A + F PD L+
Sbjct: 101 VISLFEQMQ-ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLL 159
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G+C ++++A L ++ GF V Y ++ C LC+ + + A ++
Sbjct: 160 HGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHC---LCKNRHL----NHAVEIFNQ 212
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M NG+ NV T+N L+S LC+I R DA L M + G PN TF LI + + +
Sbjct: 213 MGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGK 272
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E E+ M Y + LC R+++A +F M+++G+ P+ TY
Sbjct: 273 IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTT 332
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
L+ +C RV+ +F E + G+ Y V
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTV 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + L GR + M + G + + + +++ + G A++L K
Sbjct: 224 TYNSLVSGLCEIGRWSDAAWLLRDMMKR-GIQPNVITFTALIDAFVKVGKIMEAKELYKV 282
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++PD LI G C G+LDEA+++ M G+ V Y + + C+
Sbjct: 283 MIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTL---IHGFCK 339
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K R++ + K+ +M G+ N T+ VLI C + R + A ++F +MG P
Sbjct: 340 SK---RVE-DGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPP 395
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ VL+ L V + + M+ I Y + +C + ++E A +F
Sbjct: 396 DIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLF 455
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ + G P+ TY +++ +C + +A+ALF + +G
Sbjct: 456 CSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDG 497
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 9/254 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID V+ G+ + ++ M + + D + ++ LC G A ++
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYP-DVFTYTALINGLCTYGRLDEARQMFYL 317
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+N +P++ LI G+C ++++ ++ EM + G T+ Y + + C
Sbjct: 318 MESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVL---IQGYCL 374
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
P A++V M P ++ T+NVL+ LC E A+ +F M +
Sbjct: 375 VGRP----DVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDI 430
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ ++I+ + + +V + ++ + S G Y ++ C I +A ++F
Sbjct: 431 NIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALF 490
Query: 404 EKMKTDGHNPDSET 417
+KMK DG P+
Sbjct: 491 KKMKEDGFLPNESV 504
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 66/138 (47%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++ F L+S + K++R + I LF +M G P T +++ + ++++ +
Sbjct: 81 SIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFL 140
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M G+ + L C RIE A+++F+++ G P+ TY L+ C +
Sbjct: 141 GKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN 200
Query: 429 NRVDKANALFDEAVRNGV 446
++ A +F++ NG+
Sbjct: 201 RHLNHAVEIFNQMGDNGI 218
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 7/264 (2%)
Query: 186 FERMERD--YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKG 242
FE +R YG+K S + ++ L + ++ E L K+ +I P+ +++I
Sbjct: 173 FEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINA 232
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
C GK+++A+ + +M G+ V+YN ++D KL ++ D+ VL +M
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADA----VLKEMV 288
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
N V N+ TFN+LI K ++K+F M + PN T+ LI L ++
Sbjct: 289 ENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKIN 348
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E M D+M SAG Y+ + C +++A+ +F+ +K G P + Y++L+
Sbjct: 349 EAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLI 408
Query: 423 TKWCAHNRVDKANALFDEAVRNGV 446
+C ++D AL +E R G+
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGI 432
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 140/323 (43%), Gaps = 13/323 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE---NGYASYAEKL 221
T I+ L + G+ + E M + YG+ + S +++ C+ NG A+ +
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDM-KVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 222 VKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+K+ NE+ P+ ++LI G+ D L + ++ +EM + YN + ++
Sbjct: 284 LKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSL---ING 340
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC +EA + M GV N+ T++ LI+ CK ++A+ +F + G
Sbjct: 341 LCNGGKI----NEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQG 396
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P + +LI + + ++ +G + + M+ G Y + LC IE A
Sbjct: 397 TRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
+F+++ G PD T+ +LM +C+ KA L E + G++ + Y + +
Sbjct: 457 KLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGY 515
Query: 461 KKPIAVKKGKKRETLPEKMARKR 483
K +K T EK R R
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLR 538
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 7/182 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID + G+ E MER+ G D + ++ LC NG A+KL N+
Sbjct: 408 IDAYCKLGKIDDGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD +L++G+C G+ +A L +EM + G + + YN ++ K K
Sbjct: 467 LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATN 526
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ ++ EK + NV ++NVL+ + + EDA L M E G PN T+
Sbjct: 527 MRTQMEK------ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580
Query: 350 VL 351
++
Sbjct: 581 IV 582
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L +AGR + F+ + GF D + +++ LC+ G + +
Sbjct: 188 TYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 247
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + PD LI G+ + +A R+ R+M + G + TV YN ILD + K R
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+EA L ME G V T++ L+ C A++LF RM + GC P
Sbjct: 308 V-------AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG-IERIEQAMSV 402
N ++ ++I+ L +A ++ + +++ + FL LC ++ + + +
Sbjct: 361 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVEL 420
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
FE M + G +P+ +Y +LM C ++ A +F E V GV
Sbjct: 421 FESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGV 464
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 129/302 (42%), Gaps = 14/302 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L++AGR + + E+M + G + +V++ L + G A ++ D
Sbjct: 79 TYTALVDGLLKAGRLDEAMAVLEQMV-EKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVD 137
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM----YRGGFELGTVAYNCILDCVS 279
N PD + LIKG C GK +EA L +E + V Y ++D +
Sbjct: 138 MLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLC 197
Query: 280 KLCRKKDPFRL-DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
K R + ++ D EA +E +P V T+ +I LCK+ R E+ + F+ M
Sbjct: 198 KAGRILEARQVFDDEA------VERGFIPDAV-TYTSIIDGLCKLGRVEEGCERFHEMRN 250
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P+ T+ LI +A + + + +M +G + Y L LC R+ +
Sbjct: 251 RGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAE 310
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR 458
A + F M+ G TY LM +C+ V A LF + G E Y + R
Sbjct: 311 AYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIR 370
Query: 459 YL 460
L
Sbjct: 371 GL 372
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
++ LCR+K RLD EA VL G + T+NV I LCK R +DA +L +M
Sbjct: 14 INGLCREK---RLD-EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E C P T+ L+ L +A R+ E ++++M G + K Y + L R+E
Sbjct: 70 EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
+A +F M +G PD+ Y L+ C + ++A AL+ EA
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEA 173
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 12/220 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++I G C + +LDEA + R G E V YN +D + K R D F+L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ + E +P V T+ L+ L K R ++A+ + +M E G P T+ V
Sbjct: 65 LKKMD------EKKCLPTTV-TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTV 117
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L +A RV E + M G Y + LC + E+A +++++
Sbjct: 118 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARK 177
Query: 411 HN----PDSETYDLLMTKWCAHNRVDKANALF-DEAVRNG 445
H+ PD TY L+ C R+ +A +F DEAV G
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERG 217
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 36/313 (11%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDF---LVDNKEVLGPKTLASCIDRLVRAGRP 179
+N + T + D F + K H ++ + V+ T +D L +AGR
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK---DTANEIFPDDKIC 236
+ F ME + G + +++ C G S A +L + D E P+
Sbjct: 309 AEAYATFLAME-ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE--PNLVSY 365
Query: 237 DLLIKGWCVDGKLDEA---------KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+++I+G C GKL +A +RL ++Y +N L LC++ D
Sbjct: 366 NIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY---------TFNAFL---HGLCQRLDT 413
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
S+ ++ M G N+ ++++L+ +C+ E A+++F M G P+
Sbjct: 414 V---SDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVV 470
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F LI+ L A RV E E+ ++ A Y+ L L ER+E+A + MK
Sbjct: 471 FNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMK 529
Query: 408 TDGHNPDSETYDL 420
G P YDL
Sbjct: 530 LQGCAP--RHYDL 540
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%)
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P+ F V+I L + R+ E +++R AG Y F+ LC ER++ A
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
+ +KM P + TY L+ R+D+A A+ ++ V G K Y V L
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 461 KKPIAVKKGKK 471
K V++ ++
Sbjct: 123 SKAGRVEEARR 133
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 169/388 (43%), Gaps = 23/388 (5%)
Query: 76 EADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLS 135
+A+ + + +L F V+ LV + L+ A F W + ++H+
Sbjct: 24 DANRIQVRNKLEHCFIKVSG--ELVVAVLSRIRNDWEAAFTFFVWAGKQPGYAHSVREYH 81
Query: 136 FFTDYFGRRKDFKAIHDFLVD-------NKEVLGPKTLASCIDRLVRAGRPTQVLGFFER 188
G+ + F L+D ++ P+TL I R + + F
Sbjct: 82 SMISILGKMRKFDTAWA-LIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDVAKAINTFYA 140
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDG 247
+R +GF + + ++ LC AE L+ ++FP + K ++++ GWCV G
Sbjct: 141 HKR-FGFNIGLEEFQSLLSALCRYKNVKDAEYLLF-CNKDVFPFNTKSFNIILNGWCVIG 198
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
L + +R+ +EM R G V+Y + C SK+ RL + +++ +D +
Sbjct: 199 SLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDR---- 254
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
+ +N +I +L K R ++A L M E G N T+ +IK L +A R E +
Sbjct: 255 ---KVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAV 311
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ + G + Y+ FL R E E+ + +KM+T G NP ++TY +L+ K+C
Sbjct: 312 FEELLQRGLCPTIQTYHAFL-RFLRTE--EEIFELLKKMRTMGCNPTTDTYIMLIRKFCR 368
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRV 455
++D + ++ E NG+ Y V
Sbjct: 369 WRQLDNVSRIWHEMSENGISPDRSSYIV 396
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 8/224 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++I+ +C + +A R GF +G + +L S LCR K+ +AE +
Sbjct: 120 IMIRRYCAVHDVAKAINTFYAHKRFGFNIGLEEFQSLL---SALCRYKNV----KDAEYL 172
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L + P N ++FN++++ C I D +++ M G + ++ I +
Sbjct: 173 LF-CNKDVFPFNTKSFNIILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSK 231
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ + + + MK +K Y + L +++A + + M+ G + T
Sbjct: 232 VRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVT 291
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
Y+ ++ C R D+A A+F+E ++ G+ + Y R+L+
Sbjct: 292 YNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFLRFLR 335
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ ASCI + +VL FE M+R D+ V+ L + A L+K
Sbjct: 221 SYASCISCYSKVRNLHKVLRLFEDMKR-MKIDPDRKVYNAVIHSLAKGRCLKEAADLIKT 279
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I + + +IK C + DEA+ + E+ + G Y+ L +
Sbjct: 280 MEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFLRFL----- 334
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R + E ++L M G +T+ +LI C+ R+ ++ ++++ M E G P
Sbjct: 335 -----RTEEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISP 389
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ ++++VLI L+ ++ + + MK
Sbjct: 390 DRSSYIVLIHGLFLNGKLEDAHKYYLEMK 418
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 148/329 (44%), Gaps = 21/329 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S +D L GR + R+ + YG K D + V++ LC +AE+L+ +
Sbjct: 339 TYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAE 397
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ PD+ + +I C G +D A ++ +M G V YN I+D LC
Sbjct: 398 MVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIID---GLCN 454
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ R +A ++L +++ G ++ TFN L+ LC + R EDA +L M C P
Sbjct: 455 E----RCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPP 510
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TTF +I SL Q + + E + M G + Y + L + ++A+ +
Sbjct: 511 DATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
M T+G PD TY+ +++ ++++A L V NG+ YR
Sbjct: 571 SGM-TNG-TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYR--------- 619
Query: 464 IAVKKGKKRETLPEKMARKRRRLKQIRLS 492
++ G RE ++ R RL+ + LS
Sbjct: 620 -SLAYGICREDGTDRAIRMLCRLQDMGLS 647
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 13/278 (4%)
Query: 173 LVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-NGYASYAEKLVKDTAN 227
L+RA GR L F+ M G + ++++ C+ +GY L + A
Sbjct: 168 LIRALCVRGRVPDALAVFDDMLH-RGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAK 226
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
PD ++LI C +G +DEA + ++ G + V Y +L + R K
Sbjct: 227 GCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWK-- 284
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
E E++ +M N + TFN ++++LC+ + AIK+ M E GC P+ T
Sbjct: 285 -----EVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVT 339
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ ++ L RV + E++ R+KS G Y L LC IE+ E A + +M
Sbjct: 340 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMV 399
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD T++ ++ C VD+A + ++ NG
Sbjct: 400 CSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 146/363 (40%), Gaps = 28/363 (7%)
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRL 173
I+ +N + N DE L+ +D A+ T + L
Sbjct: 232 IVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAV--------------TYTPVLKSL 277
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPD 232
+ R +V F M + D+ + +V LC+ G A K+V + PD
Sbjct: 278 CGSERWKEVEELFAEMASNK-CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPD 336
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
++ G C G++D+A L + G + T+AY +L LC +
Sbjct: 337 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVL---KGLCSIEQW----E 389
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
AE+++ +M + P + TFN +I++LC+ + AIK+ +M E GC+P+ T+ +I
Sbjct: 390 HAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSII 449
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L + + E++ ++S G + L LC ++R E A + M
Sbjct: 450 DGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCP 509
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKR 472
PD+ T++ ++T C + +A NG Y + L +K GK +
Sbjct: 510 PDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDAL-----LKAGKTQ 564
Query: 473 ETL 475
E L
Sbjct: 565 EAL 567
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 9/298 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D A+ D ++ T + +D +A Q + + M R G + D +
Sbjct: 176 GRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEM-RAKGCEPDIVT 234
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ +C G A ++ D ++ PD ++K C + E + L EM
Sbjct: 235 YNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMA 294
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V +N I V+ LC++ L A KV+ M +G ++ T++ ++ L
Sbjct: 295 SNKCAPDEVTFNTI---VTSLCQQG----LVDRAIKVVDHMSEHGCIPDIVTYSSILDGL 347
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C + R +DA++L R+ +GC P+ + ++K L + +E++ M + +
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDE 407
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ + LC +++A+ V E+M +G NPD TY+ ++ C +D A L
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELL 465
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 18/311 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I RL GR ER+ G + +V C G A +L+
Sbjct: 105 IKRLCSGGRVADA----ERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMP--- 157
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
FP D + LI+ CV G++ +A + +M G V Y+ +LD K +
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATC----KASGY 213
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R +A +L +M G ++ T+NVLI+ +C ++A+ + + GC P+ T+
Sbjct: 214 R---QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTY 270
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++KSL + R E +E+ M S A + + +T LC +++A+ V + M
Sbjct: 271 TPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSE 330
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
G PD TY ++ C RVD A L G + Y LK ++++
Sbjct: 331 HGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT---VLKGLCSIEQ 387
Query: 469 GKKRETLPEKM 479
+ E L +M
Sbjct: 388 WEHAEELMAEM 398
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C++LIK C G++ +A+R+ + G V YN +++ + R +D RL S
Sbjct: 101 CNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLIS--- 154
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
M + P + TFN LI LC R DA+ +F M GC P+ T+ +L+ +
Sbjct: 155 ----GMPF---PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDAT 207
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+A+ + ++D M++ G Y + +C +++A+++ + + G PD+
Sbjct: 208 CKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDA 267
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRN 444
TY ++ C R + LF E N
Sbjct: 268 VTYTPVLKSLCGSERWKEVEELFAEMASN 296
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 10/257 (3%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKL 249
+ YG K D + +++ LC AE+L V ++ PD + +I C G L
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLL 528
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
+A + M G YN ++D + K + ++ +L L NG P +
Sbjct: 529 LQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKL--------LSGMTNGTP-D 579
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
+ T+N +ISN+ K + E+A+ L M G P+ T+ L + + M+
Sbjct: 580 LITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLC 639
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
R++ G + Y + L C R + A+ F M + G PD TY +L+
Sbjct: 640 RLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYEC 699
Query: 430 RVDKANALFDEAVRNGV 446
+D+A L GV
Sbjct: 700 LLDEAKQLLVNLCSLGV 716
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 79/207 (38%), Gaps = 32/207 (15%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG------------CH----------- 342
+P V N+LI LC R DA ++F +G C
Sbjct: 94 LPLPVVPCNILIKRLCSGGRVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLI 153
Query: 343 ------PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
P+ TF LI++L RV + + D M G + Y L C
Sbjct: 154 SGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGY 213
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
QAM + ++M+ G PD TY++L+ C VD+A + + +G KP
Sbjct: 214 RQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHG--CKPDAVTYT 271
Query: 457 PRYLKKPIAVKKGKKRETLPEKMARKR 483
P LK ++ K+ E L +MA +
Sbjct: 272 P-VLKSLCGSERWKEVEELFAEMASNK 297
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 133/300 (44%), Gaps = 34/300 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANE 228
I L GR L + M R G + + + +++E +C N G+ L + A
Sbjct: 150 IRVLCDRGRVADALSLLDDMLR-RGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG 208
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKD 286
P+ +++I G C +G++D+A+ L + GF+ TV+Y +L C SK R D
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASK--RWDD 266
Query: 287 PFRLDSE----------------------------AEKVLLDMEYNGVPRNVETFNVLIS 318
L +E A +VL M +G N N++I+
Sbjct: 267 VEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVIN 326
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
++CK R +DA KL MG +GC+P+ ++ ++K L +A R + E+++ M
Sbjct: 327 SICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPP 386
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ + F+ LC IEQA+ + E+M G TY+ L+ +C +D A LF
Sbjct: 387 NEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF 446
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 12/275 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ + R GR R+ YGF+ D S +++ LC + E+L + +
Sbjct: 220 INGMCREGRVDDARELLNRLP-SYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 278
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P++ D+LI+ +C G ++ A ++ +M G T N +++ + K R D F
Sbjct: 279 CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAF 338
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L L DM G + ++ ++ LC+ R +DA +L M C PNE TF
Sbjct: 339 KL-------LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTF 391
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
I L Q + + +I++M G +G Y + C I+ A+ +F M
Sbjct: 392 NTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPC 451
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
P++ TY L+T C R+D A L E +R
Sbjct: 452 ---KPNTITYTTLLTGLCNAERLDGAAELVAEMLR 483
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 123/310 (39%), Gaps = 45/310 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L R GR + R G D + +V C G+ A +L+ +
Sbjct: 83 IRNLCRRGRTSDAARVL-RAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP--V 139
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD LI+ C G++ +A L +M R G + V Y +L+ +CR
Sbjct: 140 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE---AMCRNSG--- 193
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG--------- 340
+A VL +M G N+ T+NV+I+ +C+ R +DA +L R+ +G
Sbjct: 194 -FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYT 252
Query: 341 --------------------------CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
C PNE TF +LI+ + V +++++M
Sbjct: 253 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH 312
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G A + +C R++ A + M + G NPD+ +Y ++ C R D A
Sbjct: 313 GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDA 372
Query: 435 NALFDEAVRN 444
L +E VRN
Sbjct: 373 KELLNEMVRN 382
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 35/316 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
I+ + + GR M YG D S V++ LC A++L+ + N
Sbjct: 325 INSICKQGRVDDAFKLLNDMG-SYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNN 383
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CV-------- 278
P++ + I C G +++A L +M G +G V YN +++ CV
Sbjct: 384 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSAL 443
Query: 279 -------------------SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ LC + RLD AE V +M P NV TFNVL+S
Sbjct: 444 ELFRSMPCKPNTITYTTLLTGLCNAE---RLDGAAELVA-EMLRGDCPPNVVTFNVLVSF 499
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C+ E+AI+L +M E GC PN T+ L+ + + + E++ + S G +
Sbjct: 500 FCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPD 559
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ + L +RIE+A+ +F ++ G P + Y+ ++ C +D A F
Sbjct: 560 VITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFA 619
Query: 440 EAVRNGVEVKPKEYRV 455
V NG Y +
Sbjct: 620 YMVSNGCMPNESTYII 635
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 11/242 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC G S A ++++ P D + L+ G+C G LD A+RL G
Sbjct: 82 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLI-----GS 136
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ AY + LC D R+ ++A +L DM G NV T+ VL+ +C+
Sbjct: 137 MPVAPDAYT-YTPLIRVLC---DRGRV-ADALSLLDDMLRRGCQPNVVTYTVLLEAMCRN 191
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
E A+ + M GC PN T+ V+I + + RV + E+++R+ S G+ Y
Sbjct: 192 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSY 251
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
L LC +R + +F +M P+ T+D+L+ +C V++A + ++
Sbjct: 252 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTE 311
Query: 444 NG 445
+G
Sbjct: 312 HG 313
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 150/369 (40%), Gaps = 17/369 (4%)
Query: 84 QRLHLIFSHVTPT-PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFG 142
Q L + H T +L +N + GR F L ++ +T+S+ T G
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAF-KLLNDMGSYGCNPDTISYTTVLKG 362
Query: 143 -----RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
R D K + + +V N T + I L + G Q + E+M ++G
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMS-EHGCTV 421
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ +V C G+ A +L + + P+ L+ G C +LD A L
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSMPCK--PNTITYTTLLTGLCNAERLDGAAELVA 479
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM RG V +N + VS C+K EA +++ M +G N+ T+N L+
Sbjct: 480 EMLRGDCPPNVVTFNVL---VSFFCQKG----FLEEAIELVEQMMEHGCTPNLITYNTLL 532
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ K SEDA++L + + G P+ TF +I L + R+ E ++ ++ G
Sbjct: 533 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMR 592
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + L LC I+ A+ F M ++G P+ TY +L+ + +A L
Sbjct: 593 PKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDL 652
Query: 438 FDEAVRNGV 446
GV
Sbjct: 653 LSVLCSRGV 661
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ LCR+ S+A +VL E +G P +V +N L++ C+ + A +L +G
Sbjct: 83 IRNLCRRGR----TSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL---IG 135
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
P+ T+ LI+ L RV + ++D M G Y L +C E
Sbjct: 136 SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFE 195
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
QAM+V ++M+ G P+ TY++++ C RVD A L + G + Y
Sbjct: 196 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTT-- 253
Query: 458 RYLKKPIAVKKGKKRETLPEKMARK 482
LK A K+ E L +M K
Sbjct: 254 -LLKGLCASKRWDDVEELFAEMMEK 277
>gi|21537126|gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 139/317 (43%), Gaps = 17/317 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERME---RDYG 194
GR D ++D ++ EV + P TL I+ L ++ R + L FE+M D G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLSKSRRVDEALEVFEQMRGKRTDDG 363
Query: 195 --FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLD 250
K D +++ LC+ G AE+L+ E P+ + LI G+C KL+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAVKLE 423
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
AK + M + V N I V +CR + A +DME GV NV
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTI---VGGMCRHHGL----NMAVVFFMDMEKEGVKGNV 476
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI C + E A+ + +M E GC P+ + LI L Q R + ++++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+K G+++ Y + C E+ + M+ +G PDS TY+ L++ + H
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 431 VDKANALFDEAVRNGVE 447
+ + ++ +G++
Sbjct: 597 FESVERMMEQMREDGLD 613
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 121/294 (41%), Gaps = 28/294 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T+ + + + R + FF ME++ G K + + ++ C A EK
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+++ + PD KI LI G C + +A R+ ++ GGF L +AYN + +
Sbjct: 502 MLEAGCS---PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML---IGL 555
Query: 281 LCRKKDPFRLDSEAEKV---LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
C K + AEKV L DME G + T+N LIS K + E ++ +M
Sbjct: 556 FCDKNN-------AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI----GKKDYYEFLTRLCGI 393
E G P TT+ +I + VGE DE + K G Y + +
Sbjct: 609 EDGLDPTVTTYGAVIDAY---CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
QA+S+ E+MK P+ ETY+ L + + L DE V E
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCE 719
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 239 LIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+I +C G+LDEA +L ++M TV YN +++ SKL L E
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE---- 677
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M+ V NVET+N L L + + E +KL M E C PN+ T +L++
Sbjct: 678 ---MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME---- 730
Query: 358 AARVGEGDEMIDRMK-SAGYAIG 379
R+ DE++ K GY++
Sbjct: 731 --RLSGSDELVKLRKFMQGYSVA 751
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 9/273 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TANEIFPDDK 234
GR L M G DK + ++ C+ G A K+ + T E+ P
Sbjct: 161 GRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAV 220
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ + LI G+C GKLD A + +M + G + YN ++ + R D +
Sbjct: 221 MYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAY------ 274
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
VL +M+ NG +V T+N+LI+ CK + A+++F M + G T+ LI
Sbjct: 275 -AVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYV 333
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ +V E D + + G Y + C +E+A + +M+ PD
Sbjct: 334 FSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPD 393
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY+ LM +C R+D+A L DE + G++
Sbjct: 394 DMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQ 426
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 8/163 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + D ++ C G A +++ + + I PDD + L++G+C+ G+LDEA
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L EM + G + V+YN ++ S KD R+ E ++D +N + T
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDE----MMDKGFN---PTLMT 466
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+N LI LCKIR+ +DA L M G P+++T++ LI+ L
Sbjct: 467 YNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 11/218 (5%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++++ C GK A L R+M R V YN + ++ C + R+ + E
Sbjct: 120 NIMLRHLCATGKPVRALELLRQMPRPN----AVTYNTV---IAGFCARG---RVQAALEV 169
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKSL 355
+ E G+ + T+ LIS CKI R EDA+K+F M G P+ + LI
Sbjct: 170 MREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGY 229
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ + + M G A+ Y + L R A +V E+M+ +G +PD
Sbjct: 230 CDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDV 289
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY++L+ +C KA +F+E + GV Y
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTY 327
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+ +++ LC G A +L++ P+ + +I G+C G++ A + REM
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR---PNAVTYNTVIAGFCARGRVQAALEVMREMR 174
Query: 261 -RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLIS 318
RGG Y ++ K+ R +D A KV +M G V + +N LI
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMED-------AVKVFDEMLTKGEVAPSAVMYNALIG 227
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + + + A++ M + G T+ +L+ +L+ AR + +++ M+ G++
Sbjct: 228 GYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSP 287
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C ++A+ VFE+M G + TY L+ + +V + + LF
Sbjct: 288 DVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLF 347
Query: 439 DEAVRNGV 446
+ AV+ G+
Sbjct: 348 NVAVKKGI 355
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 129/309 (41%), Gaps = 12/309 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
GR +D + D ++ EV P + + I G+ L + E M + G
Sbjct: 196 IGRMEDAVKVFDEMLTKGEV-APSAVMYNALIGGYCDVGKLDVALQYREDMVQR-GIAMT 253
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ L++ L + AS A ++++ F PD ++LI G+C +G +A +
Sbjct: 254 VATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFE 313
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM + G V Y ++ S+ + ++ RL + A K G+ +V +N LI
Sbjct: 314 EMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK-------KGIRPDVVMYNALI 366
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
++ C E A ++ M + P++ T+ L++ R+ E +ID M G
Sbjct: 367 NSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQ 426
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y ++ I+ A+ V ++M G NP TY+ L+ C + D A L
Sbjct: 427 PDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENL 486
Query: 438 FDEAVRNGV 446
E V G+
Sbjct: 487 MKEMVAKGI 495
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P TFN+++ +LC + A++L +M PN T+ +I RV
Sbjct: 112 LPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAAL 167
Query: 366 EMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMT 423
E++ M+ G A K Y ++ C I R+E A+ VF++M T G P + Y+ L+
Sbjct: 168 EVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIG 227
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++D A ++ V+ G+ + Y +
Sbjct: 228 GYCDVGKLDVALQYREDMVQRGIAMTVATYNL 259
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 143/302 (47%), Gaps = 18/302 (5%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+ I+ L + G + + F++ME++ G K + + +++ LC++ + A + + +
Sbjct: 202 TTVINGLCKTGNTSMAVDVFKKMEQN-GCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260
Query: 227 NEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
P + + ++ G+C G+L+EA RL +EM TV + ++D LC++
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVD---GLCKEG 317
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ SEA V M GV ++ T+N L+ C R +A K+F M GC P
Sbjct: 318 ----MVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
++ +LI ++ R+ E ++ M Y + LC + R ++A+++F++
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIA 465
M + G +P+ TY +L+ +C H +D+A L KE +++P + I
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSM---------KEKKLEPNIVHYTIL 484
Query: 466 VK 467
++
Sbjct: 485 IE 486
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 128/311 (41%), Gaps = 18/311 (5%)
Query: 137 FTDYFGRRKDFKAI------HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
F F ++K + + D V L +C+ RL VLG ++
Sbjct: 99 FLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKL- 157
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKL 249
G D + ++ LC G A +L + + I +I G C G
Sbjct: 158 ---GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNT 214
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
A + ++M + G + V Y+ I+D LC+ RL ++A + L +M G+P N
Sbjct: 215 SMAVDVFKKMEQNGCKPNVVTYSTIID---SLCKD----RLVNDAMEFLSEMVERGIPPN 267
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V T+N ++ C + + +A +LF M PN TF +L+ L + V E + +
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFE 327
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M G Y + C + +A VFE M G P + +Y++L+ +C
Sbjct: 328 TMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSR 387
Query: 430 RVDKANALFDE 440
R+D+A +L E
Sbjct: 388 RMDEAKSLLAE 398
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 10/257 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ ++V+ LC+ G S A +LV +T E + PD + L+ G+C+ ++EAK++
Sbjct: 305 TFTILVDGLCKEGMVSEA-RLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M R G G +YN + ++ C+ + R+D EA+ +L +M + + + T++ L+
Sbjct: 364 MIRKGCAPGAHSYNIL---INGYCKSR---RMD-EAKSLLAEMYHKALNPDTVTYSTLMQ 416
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC++ R ++A+ LF M +G HPN T+++L+ + + E +++ MK
Sbjct: 417 GLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEP 476
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + + ++E A +F K+ DG PD TY +++ D+A LF
Sbjct: 477 NIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLF 536
Query: 439 DEAVRNGVEVKPKEYRV 455
+ +G Y V
Sbjct: 537 RKMEDDGFLPNSCSYNV 553
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 126/300 (42%), Gaps = 11/300 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T ++ ID L + + F M ER G + + +V C G + A +L K
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVER--GIPPNVFTYNSIVHGFCNLGQLNEATRLFK 292
Query: 224 D-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ ++ P+ +L+ G C +G + EA+ + M G E YN ++D C
Sbjct: 293 EMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMD---GYC 349
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ RL +EA+KV M G ++N+LI+ CK RR ++A L M +
Sbjct: 350 LQ----RLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALN 405
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ L++ L Q R E + M S G Y L C +++A+ +
Sbjct: 406 PDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKL 465
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+ MK P+ Y +L+ +++ A LF + +G + Y V + L K
Sbjct: 466 LKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 244 CVDGKLDEAKRLAR-----EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
CVD L R+ R + G LG+ A V LC + D FR
Sbjct: 73 CVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFR--------- 123
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
V NV + N+LI+ LC++ + ++ + +M + G HP+ TF LI L
Sbjct: 124 -------VTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNE 176
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ E E+ + M G+ Y + LC A+ VF+KM+ +G P+ TY
Sbjct: 177 GKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTY 236
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ C V+ A E V G+
Sbjct: 237 STIIDSLCKDRLVNDAMEFLSEMVERGI 264
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 43/248 (17%)
Query: 201 SLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
SL +++ LC + ++ ++ K I PD + LI G C +GK+ EA L EM
Sbjct: 130 SLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEM 189
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ G E NV ++ +I+
Sbjct: 190 VKRGHE------------------------------------------PNVISYTTVING 207
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LCK + A+ +F +M + GC PN T+ +I SL + V + E + M G
Sbjct: 208 LCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPN 267
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + C + ++ +A +F++M P++ T+ +L+ C V +A +F+
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFE 327
Query: 440 EAVRNGVE 447
GVE
Sbjct: 328 TMTEKGVE 335
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 119/307 (38%), Gaps = 65/307 (21%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +D L + G ++ FE M + G + D + +++ C + A+K+ +
Sbjct: 305 TFTILVDGLCKEGMVSEARLVFETMT-EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P ++LI G+C ++DEAK L EMY TV Y+ ++ + +L R
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423
Query: 284 KKDPFRLD----------------------------SEAEKVLLDMEYNGVPRNVETFNV 315
K+ L EA K+L M+ + N+ + +
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI + + E A +LF ++ G P+ T+ V+IK L + G DE D
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKE---GLSDEAYD------ 534
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+F KM+ DG P+S +Y++++ + + A
Sbjct: 535 --------------------------LFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 568
Query: 436 ALFDEAV 442
L DE V
Sbjct: 569 RLIDEMV 575
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 18/217 (8%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + +++ LC+ G A L K+ + P+ +L+ G+C G LDEA +L
Sbjct: 407 DTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLL 466
Query: 257 REMYRGGFELGTVAYNCILD---CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ M E V Y +++ KL K+ F K+ D G ++ T+
Sbjct: 467 KSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELF------SKLFGD----GTRPDIRTY 516
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
V+I L K S++A LF +M + G PN ++ V+I+ Q +ID M
Sbjct: 517 TVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVG 576
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+++ + L +E ++ +S F + + G
Sbjct: 577 KRFSVNLSTFQMLLD----LESQDEIISQFMRGSSQG 609
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
ID L + G+ + M ++ G K + + +++ C G A+++ E
Sbjct: 349 IDALCKEGKLKEAKNLLGVMTKE-GVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE 407
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P +++I G C +DEA L REM TV YN ++D LC+
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLID---GLCKSG--- 461
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+ S A ++ ++ + G P +V T+ L+ LCK + + AI LF +M E G PN+ T+
Sbjct: 462 RITS-ALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 520
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L + AR+ ++ + G I Y + LC +++A+++ KM+
Sbjct: 521 TALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMED 580
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+G PD+ T+++++ + DKA L E + G+
Sbjct: 581 NGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 9/289 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TA 226
+ ID L + + F+ M G D + ++ C G A L+ + T
Sbjct: 277 TIIDGLCKDKLVNEAYDFYTEMNSR-GIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTL 335
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
I PD +LI C +GKL EAK L M + G + V Y+ ++D C +
Sbjct: 336 KNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMD---GYCLVGE 392
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
A+++ M V +V ++N++I+ LCK + ++A+ L M PN
Sbjct: 393 V----HNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTV 448
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI L ++ R+ +++ + G Y L LC + +++A+++F KM
Sbjct: 449 TYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKM 508
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
K G P+ TY L+ C R+ A LF + G + Y V
Sbjct: 509 KERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNV 557
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 11/313 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K HD +V + + + ++ L + G + RM D + D
Sbjct: 216 GEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLL-RMIEDRSTRPDVVM 274
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++ + A + + IFPD LI G+C+ G+L A L EM
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMT 334
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
Y ++D + K + K EA+ +L M GV NV T++ L+
Sbjct: 335 LKNINPDVYTYTILIDALCKEGKLK-------EAKNLLGVMTKEGVKPNVVTYSTLMDGY 387
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C + +A ++F+ M + +P+ ++ ++I L + V E ++ M
Sbjct: 388 CLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNT 447
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC RI A+ + +++ G D TY L+ C + +DKA ALF +
Sbjct: 448 VTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMK 507
Query: 441 AVRNGVEVKPKEY 453
G++ P +Y
Sbjct: 508 MKERGIQ--PNKY 518
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 122/296 (41%), Gaps = 17/296 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G + D +L +++ C G +++ ++ + P+ I L+KG C+ G++ ++
Sbjct: 162 GIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKS 221
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ GF++ V+Y +L+ + K+ + A K+L +E +V
Sbjct: 222 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRC-------AIKLLRMIEDRSTRPDVVM 274
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +I LCK + +A + M G P+ T+ LI A ++ +++ M
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMT 334
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
Y + LC ++++A ++ M +G P+ TY LM +C V
Sbjct: 335 LKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVH 394
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQ 488
A +F V+ V+P I + K +++ E M R L +
Sbjct: 395 NAKQIFHAMVQT---------EVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHK 441
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ ++ T ++LI+ C + + + + ++ + G PN L+K L
Sbjct: 158 MEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGE 217
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + D++ + G+ + + Y L LC I A+ + ++ PD Y+
Sbjct: 218 VKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
++ C V++A + E G+
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGI 303
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 136/293 (46%), Gaps = 10/293 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-- 222
T S ++ + + + + F+ M + GF+ D + ++ LC+ G + A +++
Sbjct: 80 TYNSLLNAFCKETKMKEAMELFKTMA-EKGFEPDVVTYSTIISGLCKTGKVTEALEMLFH 138
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
K + + LI G C D ++ A +L EM G+ + YN IL S LC
Sbjct: 139 KMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTIL---SGLC 195
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R SEA++ M G +V +N L+ L K ++++A+KLF + G
Sbjct: 196 RMGKV----SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYM 251
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ ++ L + + + E +EM +M ++G A Y L+ C ++++ A V
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKV 311
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E+M G PD TY++L+ C N VDKA+ LF V NG Y V
Sbjct: 312 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 143/312 (45%), Gaps = 33/312 (10%)
Query: 165 TLASCIDRLVRAGRPTQVLG--FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
T ++ I L + G+ T+ L F + +ER G + + ++ LC++ A KL+
Sbjct: 115 TYSTIISGLCKTGKVTEALEMLFHKMIER--GCSANTVAYNALINGLCKDENIERAYKLL 172
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
++ A++ + PD+ + ++ G C GK+ EAK+ M G+ VAYN +LD + K
Sbjct: 173 EEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKE 232
Query: 282 CRKKDPFRL-----------DS-----------------EAEKVLLDMEYNGVPRNVETF 313
+ + +L D+ EAE++ M +G N T+
Sbjct: 233 GKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATY 292
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
++++S C+ ++ +DA K+ M + G P+ T+ +L+ L + V + E+ M
Sbjct: 293 SIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 352
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G A Y L LC ++ A +F++M PD T+++LM C ++D+
Sbjct: 353 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 412
Query: 434 ANALFDEAVRNG 445
A L D+ +G
Sbjct: 413 AKDLLDQMTCSG 424
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+++K +C GKL + +L +M G + YN ++D +K R + RL E V
Sbjct: 13 VVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSV 72
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
G+ ++ T+N L++ CK + ++A++LF M E G P+ T+ +I L +
Sbjct: 73 -------GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 358 AARVGEGDEMI-DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+V E EM+ +M G + Y + LC E IE+A + E+M + G+ PD+
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 417 TYDLLMTKWCAHNRVDKANALFD 439
TY+ +++ C +V +A FD
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFD 208
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 30/285 (10%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ R+V++ C+ G KL + N I PD ++LI G+ G++DEA RL EM
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRL-DSEAEKVL-------------------- 298
G E YN +L+ K + K+ L + AEK
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129
Query: 299 ---LDMEYN-----GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
L+M ++ G N +N LI+ LCK E A KL M G P+ T+
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++ L + +V E + D M S GY+ Y L L + ++AM +F+ + G
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ PD+ TY+ ++ + +D+A +F + V +G Y +
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 9/274 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L R G+ ++ FF+ M G+ D + +++ L + G A KL KD
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSR-GYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A PD + ++ G +DEA+ + ++M G Y+ +L S CR
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVL---SGHCR 301
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K ++D +A KVL +M G +V T+N+L+ LCK + A +LF M + GC P
Sbjct: 302 AK---KVD-DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ V++ L + +V + + DRM + + LC ++++A +
Sbjct: 358 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
++M G PD Y+ LM R +A+ L
Sbjct: 418 DQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRL 451
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 15/249 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
+D L + G+ + + F+ + G+ D + ++ L AE++ K A+
Sbjct: 226 LDALYKEGKTDEAMKLFKDVIAK-GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +++ G C K+D+A ++ EM + G V YN +LD LC+
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD---GLCKT---- 337
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L +A ++ M NG ++ +++V+++ LCK + DA LF RM E P+ TF
Sbjct: 338 NLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTF 397
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE---RIEQAMSVFEK 405
+L+ L +A ++ E +++D+M +G A DY + T + G+ R QA + +
Sbjct: 398 NILMDGLCKAGKLDEAKDLLDQMTCSGCA---PDYVAYNTLMNGLRKQGRHIQADRLTQA 454
Query: 406 MKTDGHNPD 414
MK G D
Sbjct: 455 MKEKGFLSD 463
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N TF V++ + CK + D KLF +M + G P+ + +LI + RV E + +
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M S G Y L C ++++AM +F+ M G PD TY +++ C
Sbjct: 67 EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126
Query: 429 NRVDKA-NALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
+V +A LF + + G Y L K +++ K L E+MA K
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYK---LLEEMASK 178
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN TF V++KS + ++ +G ++ ++M G + +Y + R+++A
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++E+M + G P TY+ L+ +C ++ +A LF G E
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFE 110
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 124/276 (44%), Gaps = 8/276 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + ID L + G + F ++ + +K + + +++ C G + AE L V+
Sbjct: 288 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 347
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ LI G C G D A L +M + GF YN ++D C+
Sbjct: 348 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID---GFCK 404
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA KVL G+ + T+ +LI+ CK A+ LF RM E GC P
Sbjct: 405 KGKI----QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 460
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + LI + Q ++ E + D+ G K+ Y + C + R A+ VF
Sbjct: 461 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF 520
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
E+M +G DS TY L++ C +R+++A AL++
Sbjct: 521 ERMVQNGCFADSITYGALISGLCKESRLEEAKALYE 556
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 10/272 (3%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWC 244
F+ M R G D+ S R +V C G + L+ F D+ C ++++ C
Sbjct: 169 FDGMTRA-GVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLC 227
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
G+ + R M G V Y +D LC++ R +A VL +M
Sbjct: 228 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWID---GLCKR----RYVKQAFHVLEEMVGR 280
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIKSLYQAARVGE 363
G+ NV T LI LCKI +E A +LF ++ + + PN T+ V+I + ++
Sbjct: 281 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 340
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ ++ RM G Y + C ++A + KMK +G P+ TY+ ++
Sbjct: 341 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 400
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++ +A + A G++ Y +
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 432
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 31/302 (10%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKDTANEIFPDD 233
R G+ +V M R YGF D + +VV LCE G + +E + P+
Sbjct: 193 REGKVEEVDALLAAMWR-YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNV 251
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL--- 290
I G C + +A + EM G + + ++D + K+ + FRL
Sbjct: 252 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLK 311
Query: 291 --------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ AE +L+ M G+ N T+ LI CK
Sbjct: 312 LIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGG 371
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ A +L +M + G PN T+ +I + ++ E +++ S G K Y
Sbjct: 372 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYT 431
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+T C I A+ +F++M +G PD E Y L++ +C +++++ FD+ +
Sbjct: 432 ILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMI 491
Query: 445 GV 446
G+
Sbjct: 492 GL 493
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 7/198 (3%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+L EA + EM G L N +L ++ + F A KV M GV
Sbjct: 125 GRLPEAADMVLEMRSHGLPLCVETANWVL----RVGLETGSF---VYARKVFDGMTRAGV 177
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+ +F L+ C+ + E+ L M +G + T V+++SL + R + E
Sbjct: 178 CPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 237
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
RM G +Y ++ LC ++QA V E+M G P+ T+ L+ C
Sbjct: 238 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 297
Query: 427 AHNRVDKANALFDEAVRN 444
++A LF + +++
Sbjct: 298 KIGWTERAFRLFLKLIKS 315
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA ++L+M +G+P VET N ++ + A K+F M G P+E +F L+
Sbjct: 129 EAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALV 188
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ +V E D ++ M G+++ + LC R + F +M G
Sbjct: 189 VVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTP 248
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ Y + C V +A + +E V G +KP Y
Sbjct: 249 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG--LKPNVY 287
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 9/208 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + ID + G+ + RM G K DK + +++ + C+ G+ +YA L +
Sbjct: 394 TYNAVIDGFCKKGKIQEAYKVL-RMATSQGLKFDKITYTILITEHCKQGHITYALDLFDR 452
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N PD + LI +C +++E+++ + G Y ++ K+ R
Sbjct: 453 MVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGR 512
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A +V M NG + T+ LIS LCK R E+A L+ M + P
Sbjct: 513 -------STLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 565
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRM 371
E T + L + + ++DR+
Sbjct: 566 CEVTRVTLTFEYCRREKTSIAVSVLDRL 593
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 10/303 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VD V G + + +V + Q FF E D S +V++ CE G
Sbjct: 120 MVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN--ESKIKVVLDVYSFGIVIKGCCEAG 177
Query: 214 YASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ L+ + F P+ I LI G C G++++AK L EM + G Y
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYT 237
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ + K KK F + + M+ +GV N+ T+N +++ LCK R++DA K+
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEK-------MQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKV 290
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M E G N T+ LI L + + E +E++D+MKS G Y + CG
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCG 350
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+ ++ +A+S+ +K+ G +P TY++L++ +C A + E G++
Sbjct: 351 VRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVT 410
Query: 453 YRV 455
Y +
Sbjct: 411 YTI 413
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 132/300 (44%), Gaps = 12/300 (4%)
Query: 152 DFLVDNKEV-LGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
D LV+ +E P + + ID + G + F M + +G ++ + +++
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK-FGLVANEWTYTVLIHG 242
Query: 209 LCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
L +NG E K + +FP+ + ++ C DG+ +A ++ EM G
Sbjct: 243 LFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCN 302
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V YN + + LCR+ +EA +V+ M+ +G+ N+ T+N LI C +R+
Sbjct: 303 IVTYNTL---IGGLCREMKA----NEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLG 355
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A+ L + G P+ T+ +L+ + +++ M+ G K Y +
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILI 415
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ +E+A+ + M+ G PD TY +L+ +C R+++A+ LF V E
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFE 475
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +++L + GR F+ M R+ G + + ++ LC A+ A +++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEM-RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQ 328
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ I P+ + LI G+C KL +A L R++ G V YN + VS C+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNIL---VSGFCK 385
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K D S A KV+ +ME G+ + T+ +LI + E AI+L M E G P
Sbjct: 386 KGDT----SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTP 441
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ VLI R+ E + M + + Y + C +A+ +F
Sbjct: 442 DVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLF 501
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M+ P+ +Y ++ C + +A L ++ + +G+
Sbjct: 502 REMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGI 544
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 12/316 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T I L + G Q +E+M+ ++G + + V+ +LC++G A K+ +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQ-EHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDE 293
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + + LI G C + K +EA + +M G + YN ++D C
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLID---GFC- 349
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R +A + D++ G+ ++ T+N+L+S CK + A K+ M E G P
Sbjct: 350 ---GVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP 406
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
++ T+ +LI + ++ + + ++ M+ G Y + C R+ +A +F
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLF 466
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
+ M P+ Y+ ++ +C +A LF E + YR L K
Sbjct: 467 KSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKE 526
Query: 464 IAVKKGKKRETLPEKM 479
+K K+ E L EKM
Sbjct: 527 ---RKSKEAEGLVEKM 539
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +LI G+C+ G+++EA RL + M FE V YN + V C++ +R
Sbjct: 441 PDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTM---VLGYCKEGSSYR- 496
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
A ++ +ME +P NV ++ +I LCK R+S++A L +M + G P+++
Sbjct: 497 ---ALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDS 549
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 9/266 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID L ++ + L RME+D G D + ++ LC +G S A ++V T E
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I+PD + LI +G++ EA+ EM R + V Y+ + + LC
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL---IYGLCMYS--- 305
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RLD EAE++ M G +V T+++LI+ CK ++ E +KLF M + G N T+
Sbjct: 306 RLD-EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI+ +A ++ +E+ RM G Y L LC +IE+A+ + M+
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKA 434
+G + D TY++++ C V A
Sbjct: 425 NGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 9/300 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ++ R R L F++M G+K + +++ LC++ A L+
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMV-GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I PD + LI G C G+ +A R+ M + +N ++D K R
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
SEAE+ +M + ++ T+++LI LC R ++A ++F M GC P
Sbjct: 272 V-------SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +LI ++ +V G ++ M G Y + C ++ A +F
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
+M G +P+ TY++L+ C + +++KA + + +NG++ Y + R + K
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ G+P N+ T N+L++ C+ + A+ +M + G P+ TF L+ + R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + M D+M GY Y + LC ++++ A+ + +M+ DG PD TY+
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 421 LMTKWCAHNRVDKA-------------------NALFDEAVRNGVEVKPKEY 453
L++ C+ R A NAL D V+ G + +E+
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 7/200 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K D L +M G N +L+C CR S A L M G
Sbjct: 96 KYDVVIYLWEQMQMLGIPHNLCTCNILLNC---FCRCSQL----SLALSFLGKMIKLGHE 148
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ TF L++ C+ R DA+ +F +M G PN + +I L ++ +V ++
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
++RM+ G Y ++ LC R A + M PD T++ L+
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 428 HNRVDKANALFDEAVRNGVE 447
RV +A ++E +R ++
Sbjct: 269 EGRVSEAEEFYEEMIRRSLD 288
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 131/322 (40%), Gaps = 50/322 (15%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV---KD 224
S + L RAG + F M RD K D + +++ LC++G+ A K++
Sbjct: 136 SLLTALGRAGNLRGMTELFTSM-RDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSS 194
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR--GGFELGTVAYNCILDCVSKLC 282
+++ PD I + ++ G C G+L +A E R G V YNC+ D C
Sbjct: 195 PGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD---AFC 251
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR----------------- 325
R D A K++ ME GV NV T N +I LC++ R
Sbjct: 252 RVGDI----GMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPE 307
Query: 326 --------------------SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ A++LF+ M + G P+ + +I L QA R+ +
Sbjct: 308 ARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDAC 367
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
MK AG+ + K Y + C +++ +A + E+MK G PD TY+ L++
Sbjct: 368 TTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGL 427
Query: 426 CAHNRVDKANALFDEAVRNGVE 447
C + L + +G +
Sbjct: 428 CKAGDFSAVDELLGHMIDDGCQ 449
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 188/486 (38%), Gaps = 46/486 (9%)
Query: 1 MPPSTSLLLGRL-----------------LLQQPPHRFISPQSTYFSRFSPTHYLNFLSK 43
+PP ++LLL +L L P IS ++ + L +++
Sbjct: 93 IPPPSALLLSKLVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTE 152
Query: 44 PFSSKPTSNPKTIDDPDQVI-ARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQS 102
F+S ++ K PD V L+G D L + R+ S V P +++ +
Sbjct: 153 LFTSMRDASVK----PDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNT 208
Query: 103 TLNFSPEAGR---AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD-NK 158
++ + GR AI+ + + + T + D F R D + K
Sbjct: 209 VVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEK 268
Query: 159 EVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKR-DKDSLRLVVEKLCENGYA 215
E + P T+ + I L R GR L FF + R + + +
Sbjct: 269 EGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNV 328
Query: 216 SYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
A +L + A+ PD + +I G G+L +A A M + GF+L AYN +
Sbjct: 329 DMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNIL 388
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ CRKK EA ++L +M+ G+ +V T+N L+S LCK +L
Sbjct: 389 ---IGGFCRKKKLH----EAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLG 441
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M + GC P+ TF L+ +A + E + M A Y + LC
Sbjct: 442 HMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSR 501
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
++ A+ +F++M+ + TY+ L+ +KA L D + +E R
Sbjct: 502 EVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMD---------RMREER 552
Query: 455 VDPRYL 460
P Y+
Sbjct: 553 CTPNYV 558
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 148/342 (43%), Gaps = 15/342 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ + I + L ++ V T I ++G + L ERM D +
Sbjct: 156 GKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS----VAPDVVT 211
Query: 202 LRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC++G A E L + E +PD +LI+ C D + +A +L EM
Sbjct: 212 YNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMR 271
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ G + V YN +++ + K RLD EA K L +M G NV T N+++ ++
Sbjct: 272 KKGCKPDVVTYNVLINGICK------EGRLD-EAIKFLNNMPLYGCQPNVITHNIILRSM 324
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C R DA +L M GC P+ TF +LI L + +G +++++M G
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L C +++++A+ E M + G PD TY+ L+T C + D A + ++
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
G Y L K V K + L E+M RK
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTK---VGKTEYAAELLEEMRRK 483
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 133/303 (43%), Gaps = 33/303 (10%)
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IF 230
+LVR G + L F ERM G D + ++ C +G A ++++ N
Sbjct: 116 KLVRNGELEEGLKFLERMIYQ-GDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAV 174
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++LI G+C G++D+A ++ M V YN IL + + K+ +
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEV 231
Query: 291 -------------------------DS---EAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
DS +A K+L +M G +V T+NVLI+ +CK
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
R ++AIK M +GC PN T ++++S+ R + + ++ M G +
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVT 351
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + LC + +A+ V EKM G P+S +Y+ L+ +C ++D+A + V
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 411
Query: 443 RNG 445
G
Sbjct: 412 SRG 414
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 8/251 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + +++E C + A KL+ + + PD ++LI G C +G+LDEA +
Sbjct: 243 DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL 302
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M G + + +N IL + R D AE++L DM G +V TFN+L
Sbjct: 303 NNMPLYGCQPNVITHNIILRSMCSTGRWMD-------AERLLADMLRKGCSPSVVTFNIL 355
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LC+ R AI + +M + GC PN ++ L+ Q ++ E ++ M S G
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y LT LC + + A+ + ++ + G +P TY+ ++ + + A
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475
Query: 437 LFDEAVRNGVE 447
L +E R G++
Sbjct: 476 LLEEMRRKGLK 486
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 11/271 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLL 239
Q + + M R G K D + +++ +C+ G A K + + P+ +++
Sbjct: 262 QAMKLLDEM-RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNII 320
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
++ C G+ +A+RL +M R G V +N +++ LCRK RL A VL
Sbjct: 321 LRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN---FLCRK----RLLGRAIDVLE 373
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M +G N ++N L+ C+ ++ + AI+ M GC+P+ T+ L+ +L +
Sbjct: 374 KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 433
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+ E+++++ S G + Y + L + + E A + E+M+ G PD TY
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYS 493
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
L+ +VD+A +F + G+ +KP
Sbjct: 494 TLLRGLGCEGKVDEAIKIFHDM--EGLSIKP 522
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 130/290 (44%), Gaps = 15/290 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ + + GR + + F M YG + + + +++ +C G AE+L+ D +
Sbjct: 286 INGICKEGRLDEAIKFLNNMPL-YGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P ++LI C L A + +M + G +++YN +L C++K
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH---GFCQEK--- 398
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D E + + M G ++ T+N L++ LCK +++ A+++ ++ GC P T+
Sbjct: 399 KMDRAIEYLEI-MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITY 457
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY--YEFLTRLCGIE-RIEQAMSVFEK 405
+I L + + E+++ M+ G K D Y L R G E ++++A+ +F
Sbjct: 458 NTVIDGLTKVGKTEYAAELLEEMRRKGL---KPDIITYSTLLRGLGCEGKVDEAIKIFHD 514
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M+ P + TY+ +M C + +A V G + Y +
Sbjct: 515 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 7/184 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ G+C + K+D A M G V YN +L + LC+ + D+ E +L
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLL---TALCKDG---KADAAVE-IL 442
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ G + T+N +I L K+ ++E A +L M G P+ T+ L++ L
Sbjct: 443 NQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCE 502
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+V E ++ M+ Y + LC ++ +A+ M G P TY
Sbjct: 503 GKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATY 562
Query: 419 DLLM 422
+L+
Sbjct: 563 TILI 566
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC++G A A +++ +++ P + +I G GK + A L EM R G
Sbjct: 425 LLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKG 484
Query: 264 FELGTVAYNCIL---DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ + Y+ +L C K+ EA K+ DME + + T+N ++ L
Sbjct: 485 LKPDIITYSTLLRGLGCEGKV----------DEAIKIFHDMEGLSIKPSAVTYNAIMLGL 534
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
CK +++ AI M E GC P + T+ +LI+ +
Sbjct: 535 CKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E K L M Y G +V LI C+ ++ A ++ + G P+ T+ VLI
Sbjct: 125 EGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLI 184
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
++ + + ++++RM A + Y L LC ++++AM V ++
Sbjct: 185 GGYCKSGEIDKALQVLERMSVAPDVV---TYNTILRSLCDSGKLKEAMEVLDRQMQRECY 241
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY +L+ C + V +A L DE + G + Y V
Sbjct: 242 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 122/276 (44%), Gaps = 9/276 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
LV+ GR + +E M + G + +++ C G A+++ + I P
Sbjct: 157 LVKTGRFELLWRIYEEMISN-GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVP 215
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ +LI+G C D K++EA+ + R M G YN ++D KL K RL
Sbjct: 216 TVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY 275
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
DM G+ +V TF +LI LCK + A LF M ++ PN + L
Sbjct: 276 Q-------DMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL 328
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + + V E + ++ + Y + LC + R E+A ++FEKM +G
Sbjct: 329 IDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGI 388
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+S TY+ L+ C ++DKA + + NGVE
Sbjct: 389 LANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVE 424
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 10/272 (3%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWC 244
R R+ G + + +++ C+ A A +L +D E + PD +LI G C
Sbjct: 239 MHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLC 298
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
G++ A+ L M + YN ++D C+ D SEA + L++E
Sbjct: 299 KFGEMKAARNLFVNMIKFSVTPNIAVYNSLID---AYCKVGDV----SEAMALFLELERF 351
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
V +V T+++LI LC + R+E+A +F +M + G N T+ LI + ++ +
Sbjct: 352 EVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKA 411
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E+ +M G + + C I ++ AM ++ +M +PD TY ++
Sbjct: 412 LEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
C + + +A L+ + + NG + P Y +
Sbjct: 472 HCKYGSMKEALKLYSDMLDNG--ITPNCYTIS 501
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 121/307 (39%), Gaps = 25/307 (8%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLA---SCIDRLVRAGRPTQVLGFFERM 189
T D + + KA + V+ + +A S ID + G ++ + F +
Sbjct: 289 TFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLEL 348
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
ER + D + +++ LC A + + E I + + LI G C +GK
Sbjct: 349 ER-FEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGK 407
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+D+A + +M G E + ++ ++D K+ + + SE M +
Sbjct: 408 MDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSE-------MVIKSLSP 460
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM- 367
+V T+ +I CK ++A+KL+ M + G PN T L+ L + ++ + E+
Sbjct: 461 DVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELF 520
Query: 368 ------------IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+D S Y + LC + +A+ +F M+ G PD
Sbjct: 521 TEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDE 580
Query: 416 ETYDLLM 422
Y +++
Sbjct: 581 VIYVVML 587
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 10/247 (4%)
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C++L+ G+ + R+ EM G + + ++D CR+ D R A+
Sbjct: 150 CNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLID---GCCRQGDLLR----AQ 202
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++ +M G+ V + +LI LC + E+A + M E G +PN T+ L+
Sbjct: 203 EMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGY 262
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ A + + M G + + LC ++ A ++F M P+
Sbjct: 263 CKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNI 322
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
Y+ L+ +C V +A ALF E R EV P + ++ +V + ++ +
Sbjct: 323 AVYNSLIDAYCKVGDVSEAMALFLELER--FEVSPDVFTYSI-LIRGLCSVSRTEEAGNI 379
Query: 476 PEKMARK 482
EKM ++
Sbjct: 380 FEKMTKE 386
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-----ENGYASYAE 219
T S ID + G+ + L +M + G + + + +++ C + Y+E
Sbjct: 394 TYNSLIDGCCKEGKMDKALEICSQMTEN-GVEPNVITFSTLIDGYCKIRNLQAAMGIYSE 452
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++K + PD +I G C G + EA +L +M G +C+LD +
Sbjct: 453 MVIKSLS----PDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLC 508
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET------------FNVLISNLCKIRRSE 327
K + D L +E +E+ NV+ + LI LC+ +
Sbjct: 509 KDGKISDALELFTE------KIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFS 562
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
A+KLF M +G P+E ++V+++ L+Q +
Sbjct: 563 KAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI 596
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G ++ NVL+ L K R E +++ M G P+ TF LI + +
Sbjct: 142 GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRA 201
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
EM D M+ G Y + LC +IE+A S+ M+ G P+ TY+ LM
Sbjct: 202 QEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDG 261
Query: 425 WCAHNRVDKANALFDEAVRNGV 446
+C +A L+ + + G+
Sbjct: 262 YCKLANAKQALRLYQDMLGEGL 283
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 179/436 (41%), Gaps = 52/436 (11%)
Query: 49 PTSNPKTIDDPDQVIARSLSGELLENLEA-----DPLPISQRLHLIFSHVTPTPSLVQST 103
PT+NP + LS L+ LE P + L+ +F H +P L+ S
Sbjct: 50 PTANPNYSHSDFSTLCNLLSDPNLKPLETALDQTGIKPETSLLNAVFDHFNSSPKLLHSL 109
Query: 104 LNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGP 163
W + F + + + G+ K+F + ++D ++
Sbjct: 110 FV--------------WADKQPEFESSTTLFNSVINALGKMKEFDSAWCLVLDRTGLVSS 155
Query: 164 KTLASCIDRLVRAGRPTQVLGFFE-RMERDYGFKRDKDSL-RLVVEKLCENGYASYAEKL 221
T A I R RAG P + FE + D+ + D+L ++++ LC+ G+ A++
Sbjct: 156 DTFAILIRRYTRAGMPQSAIRTFEYAISLDFICDYNCDALLEILLDSLCKEGHVRVAKEY 215
Query: 222 V---KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
K + P +I ++++ GW KL A+RL EM + V Y +++
Sbjct: 216 FDSRKQLDSCWIPHVRIYNIMLNGWFRSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEGY 275
Query: 279 SKLCRKKDPFRL--------------------DSEAEK-----VLLDMEY---NGVPRNV 310
++ R + L D+ AE+ V MEY + +
Sbjct: 276 CRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTI 335
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N L+ CK + A K+ M G P TT+ + + + EG + +
Sbjct: 336 STYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTK 395
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M +GY + ++ L LC ER++ A+ + ++M++ G + D T +L+ +C +R
Sbjct: 396 MIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRMHR 455
Query: 431 VDKANALFDEAVRNGV 446
++A F++ ++ G+
Sbjct: 456 FEEAFMEFEDMIQKGI 471
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 118/302 (39%), Gaps = 29/302 (9%)
Query: 140 YFGRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFER-MERDYGFK 196
Y R+ +AI V KE + P L ID L GR +V G E ++ + G
Sbjct: 275 YCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESG-- 332
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRL 255
+ +V+ C+ A K++K + F P + + + G ++E L
Sbjct: 333 PTISTYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNL 392
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
+M G+ + ++ +L LC ++ RLD A ++ +M G ++ T +
Sbjct: 393 YTKMIESGYTPDRLTFHLLLKM---LCEEE---RLDL-AVQISKEMRSRGCDMDLATSTM 445
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI C++ R E+A F M + G P TF L L + V ++ D M S
Sbjct: 446 LIHLFCRMHRFEEAFMEFEDMIQKGIVPQYLTFQRLNDELRKRGMVERARKLSDMMSSVP 505
Query: 376 YAIGKKDYYEF------LTRLCGIERIEQAMSV----------FEKMKTDGHNPDSETYD 419
++ + Y R I + +AMS K+K+ NP +
Sbjct: 506 HSTNLPNTYSVEGDALRRARRSSILQKAEAMSKILKTCNDPRELVKLKSSSQNPITSAIQ 565
Query: 420 LL 421
L+
Sbjct: 566 LI 567
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 149/360 (41%), Gaps = 71/360 (19%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
++++ V T + +D L ++GR + L F MER G ++ S ++ LC+
Sbjct: 106 MIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMER-LGCTPNRRSHNTIILGLCQQS 164
Query: 214 YASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A ++ + A +I PD +LI G GKL+EA +L R M G V YN
Sbjct: 165 KIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN 224
Query: 273 CILD--CV---------------SKLCRKKDPFRLD--------------SEAEKVLLDM 301
++ C+ SK CR P R EA ++L M
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCR---PSRFTFNILIDAHCKRGKMDEAFRLLKRM 281
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
+G +V T++ LIS LC I R +DA L M + C P T LI L +A R+
Sbjct: 282 TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 341
Query: 362 GEGDEMIDRMKSAGYA---------------IGKKD--------------------YYEF 386
E E++D M S+G + G+ + Y
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ LC R+ +A VF +MK+ G P+ TY L+ +C+ +VD LF E V G+
Sbjct: 402 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 10/248 (4%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEI-FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++++ C+ G A L+K + PD + ++ G C G+++EA L EM R
Sbjct: 85 VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERL 144
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G ++N I + LC++ ++D +A +V +ME +P + ++ +LI L K
Sbjct: 145 GCTPNRRSHNTI---ILGLCQQS---KID-QACQVFHEMEARDIPPDSWSYGILIDGLAK 197
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ +A KLF RM + G P+ T+ V+I + A + E E+ M+S G +
Sbjct: 198 AGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFT 257
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + C ++++A + ++M DGH PD TY L++ C+ RVD A L ++ V
Sbjct: 258 FNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317
Query: 443 RNGVEVKP 450
+ + KP
Sbjct: 318 KR--QCKP 323
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 13/280 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLL 239
+ L F+ M R G + + + ++++ C+ G A +L+K T + PD L
Sbjct: 238 EALELFKSM-RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
I G C ++D+A+ L +M + + V N ++ + K R K EA +VL
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK-------EAREVLD 349
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M +G +V T+N L+ C+ ++E A +L M G PN T+ L+ L +A
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ E + +MKS+G A Y + C +++ + +F +M G +PD Y
Sbjct: 410 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 469
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
L + C R A AL E +R G E E D Y
Sbjct: 470 TLAAELCKSGR--SARAL--EILREGRESLRSEAWGDEVY 505
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 7/227 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LI G GKL++A+ L +++ G TVAY + + LC + F
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSL---IHGLC-MANSF 61
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A ++ DM G P + T+NV+I CK E+A L +M E G P+ T+
Sbjct: 62 ---DDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTY 118
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ L ++ RV E + + M+ G ++ + + LC +I+QA VF +M+
Sbjct: 119 NTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PDS +Y +L+ ++++A LF + +G+ Y V
Sbjct: 179 RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNV 225
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 9/284 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T ID + G + ++M D G D + V++ LC++G A L
Sbjct: 80 PVTYNVIIDASCKRGMLEEACDLIKKMIED-GHVPDVVTYNTVMDGLCKSGRVEEALLLF 138
Query: 223 KDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ P+ + + +I G C K+D+A ++ EM + +Y ++D ++K
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKA 198
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+ +EA K+ M +G+ + T+NV+I +C ++A++LF M GC
Sbjct: 199 GKL-------NEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ TF +LI + + ++ E ++ RM G+ Y ++ LC I R++ A
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ E M P T + L+ C R+ +A + D V +G
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 48/110 (43%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E P+ ++ +LI L +A ++ + ++ ++ +G Y + LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ A +F M G P TY++++ C +++A L + + +G
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDG 110
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 8/251 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D S +V LC+ G YA +LV+ FP + + + L+KG C+ G L+++
Sbjct: 129 GIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQS 188
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L + + G Y+ +L+ K R EA K+L D+ G N+ +
Sbjct: 189 LQLLDRLTKKGLIPNAFTYSFLLEAAYKE-------RGVDEAMKLLDDIIAKGGEPNLVS 241
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NVL++ LCK R+E+AIKLF + G P+ +F +L++SL R E +E++ M
Sbjct: 242 YNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMD 301
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
Y +T L R EQA V ++M G + +Y+ ++ + C +VD
Sbjct: 302 KEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVD 361
Query: 433 KANALFDEAVR 443
D+ +
Sbjct: 362 LVLKCLDQMIH 372
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 9/282 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
F + + + + +V + + + ++ L + G + E+ME +GF +
Sbjct: 112 FNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKME-GHGFPTNTV 170
Query: 201 SLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ +V+ LC +G + + +L+ + T + P+ L++ + +DEA +L ++
Sbjct: 171 TYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDI 230
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G E V+YN +L + K R + EA K+ ++ G +V +FN+L+ +
Sbjct: 231 IAKGGEPNLVSYNVLLTGLCKEGRTE-------EAIKLFQELPVKGFSPSVVSFNILLRS 283
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LC R E+A +L M + P+ T+ +LI SL R + +++D M +G+
Sbjct: 284 LCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKAS 343
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
Y + RLC +++ + ++M +P+ TY +
Sbjct: 344 ATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSAI 385
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 118/290 (40%), Gaps = 42/290 (14%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREM 259
S +++ LC+ G A KL ++ + F P ++L++ C +G+ +EA L EM
Sbjct: 241 SYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEM 300
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ V YN ++ +S R + F KVL +M +G + ++N +I+
Sbjct: 301 DKEDQPPSVVTYNILITSLSLNGRTEQAF-------KVLDEMTRSGFKASATSYNPIIAR 353
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETT-----------------FLV------------ 350
LCK + + +K +M CHPNE T F++
Sbjct: 354 LCKEGKVDLVLKCLDQMIHRRCHPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNFPMH 413
Query: 351 -----LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
LI SL + +M+ M G+ Y + +C +++A+ +F
Sbjct: 414 DFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRI 473
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ + H PD + Y+ L+ +C R D + +F V G Y +
Sbjct: 474 LEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTI 523
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 297 VLLDMEY---NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
L +EY G V L+ +LCK ++ A+++ M G P+ ++ L+
Sbjct: 83 AFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVN 142
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L + VG +++++M+ G+ Y + LC + Q++ + +++ G P
Sbjct: 143 FLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIP 202
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ TY L+ VD+A L D+ + G E Y V
Sbjct: 203 NAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNV 244
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 92/238 (38%), Gaps = 46/238 (19%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT---- 225
I L GR Q + M R GFK S ++ +LC+ G K +
Sbjct: 316 ITSLSLNGRTEQAFKVLDEMTRS-GFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRR 374
Query: 226 -------------------------------ANEIFPDDKICDLLIKGWCVDGKLDEAKR 254
+ + FP LI C G A +
Sbjct: 375 CHPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQ 434
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
+ EM + GF + Y+ + + +CR+ LD EA K+ +E N +++ +N
Sbjct: 435 MLYEMTKYGFTPDSYTYSSL---IRGMCREG---MLD-EALKIFRILEENDHRPDIDNYN 487
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
LI CK +R++ +I++F M GC PNE T+ +L++ L A E D D MK
Sbjct: 488 ALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGL---AFEEETDIAADLMK 542
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 10/285 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERM--ERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
K+ S ++ +V+ G + L F+ + + + + LV++ +C G A ++
Sbjct: 133 KSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEV 192
Query: 222 VKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
++ PD+ L+ G C + ++DEA L EM G VA+N + +S
Sbjct: 193 FREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVL---ISA 249
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+K D R A K++ +M G N T+N L+ LC + E A+ L +M
Sbjct: 250 LCKKGDLGR----AAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN+ TF LI R +G ++ +++ G+ + Y ++ LC + QAM
Sbjct: 306 CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAM 365
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++++M G P++ Y L+ C ++D+A E G
Sbjct: 366 ELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKG 410
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 26/264 (9%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G C +GK ++A L +EM G T+ Y+ ++D LCR+ +LD EA L
Sbjct: 351 LISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALID---GLCREG---KLD-EARGFL 403
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M+ G N T++ L+ + S AI ++ M C NE + +LI L +
Sbjct: 404 SEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKD 463
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG--HNPDSE 416
+ E + +M S G + Y + C +EQ + +F +M G PD
Sbjct: 464 GKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVI 523
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK----- 471
TY++L+ +C + +A + + + G DP ++ I +K ++
Sbjct: 524 TYNILLNAFCIQKSIFRAIDILNIMLDQG---------CDPDFITCDIFLKTLRENMNPP 574
Query: 472 ---RETLPEKMARKRRRLKQIRLS 492
RE L E + R +R + I S
Sbjct: 575 QDGREFLDELVVRLVKRQRTIGAS 598
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 131/322 (40%), Gaps = 44/322 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ + L + R + + + M+ + F + + +++ LC+ G A KLV +
Sbjct: 207 TYSTLMHGLCKEERIDEAVSLLDEMQVEGTFP-NLVAFNVLISALCKKGDLGRAAKLVDN 265
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P++ + L+ G C+ GKL++A L +M V + +++ R
Sbjct: 266 MFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGR 325
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D R VL+ +E G N ++ LIS LCK + A++L+ M GC P
Sbjct: 326 ASDGTR-------VLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGP 378
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK-------KDYYE----------- 385
N + LI L + ++ E + MK+ GY + Y+E
Sbjct: 379 NTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVW 438
Query: 386 -----------------FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ LC + +A+ V+++M + G D Y ++ +C
Sbjct: 439 KEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNA 498
Query: 429 NRVDKANALFDEAVRNGVEVKP 450
N V++ LF++ + G V+P
Sbjct: 499 NLVEQGLKLFNQMLCQGPVVQP 520
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 29/279 (10%)
Query: 162 GPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
GP T+ ++ ID L R G+ + GF M ++ G+ + + ++ E G + A
Sbjct: 377 GPNTIVYSALIDGLCREGKLDEARGFLSEM-KNKGYLPNSFTYSSLMRGYFEAGDSHKAI 435
Query: 220 KLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+ K+ AN +++C +LI G C DGK EA + ++M G +L VAY+ + +
Sbjct: 436 LVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSM---I 492
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNG--VPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
C L + K+ M G V +V T+N+L++ C + AI + M
Sbjct: 493 HGFCNAN----LVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIM 548
Query: 337 GEWGCHPNETTFLVLIKSLYQAAR-VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
+ GC P+ T + +K+L + +G E +D E + RL +R
Sbjct: 549 LDQGCDPDFITCDIFLKTLRENMNPPQDGREFLD---------------ELVVRLVKRQR 593
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
A + E M P + T+ +++ + C V KA
Sbjct: 594 TIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKA 632
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 143/331 (43%), Gaps = 10/331 (3%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKTLASCIDRLV 174
F W + F H T + + + F+ + L + K VL T + +
Sbjct: 115 FFCWAGEKQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLTMDTFSIAMRAFA 174
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDK 234
A + + FE M++ Y +K +++ +++ L A+ L ++ P+ +
Sbjct: 175 AAKERKKAVAMFELMKK-YNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRFTPNLR 233
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+L+ GWC L EA + EM GF+ VA+N +L+ L R K S+A
Sbjct: 234 TYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLE---GLLRSKQR----SDA 286
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
K+ + M+ G +V ++ +LI LC+ + E+A++ F M + GC P+ + LI
Sbjct: 287 IKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITG 346
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
R+ +++ MK G Y + + ++ + A +++KM G P
Sbjct: 347 FGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPT 406
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY+++M + + A++DE R G
Sbjct: 407 IHTYNMIMKSYFQTRNYEMGRAVWDEMSRKG 437
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 130/318 (40%), Gaps = 13/318 (4%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
T S+ + E +A+ F L + N+ ET++ D GR K K
Sbjct: 165 TFSIAMRAFAAAKERKKAVAMFE--LMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFE 222
Query: 156 DNKEVLGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+ K P +T ++ + + + M D GFK D + +++E L +
Sbjct: 223 NLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEM-IDKGFKPDIVAHNIMLEGLLRSK 281
Query: 214 YASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
S A KL + A PD + +LI+ C K++EA +EM G + Y
Sbjct: 282 QRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYT 341
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
C++ RK+ D +L +M+ G P + T+N LI + +++ +DA ++
Sbjct: 342 CLITGFGN--RKRMDMVYD-----LLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARI 394
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
+ +M + G P T+ +++KS +Q G + D M G+ Y + L
Sbjct: 395 YKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLIS 454
Query: 393 IERIEQAMSVFEKMKTDG 410
R +A E+M G
Sbjct: 455 QGRSGEACKYLEEMLEKG 472
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 190/488 (38%), Gaps = 76/488 (15%)
Query: 30 SRFSPTHYLNFLS----KPFSSKPTS--NPKTIDDPDQVIARSLSGELLENLEADPLPIS 83
S+ + L+F+S KPFS+ PTS N D+ + +S + L +
Sbjct: 6 SKLHLSRTLSFISPRLPKPFSTSPTSLLNDHENDESAATVTGVVSVPVSSLLTPEDTQTV 65
Query: 84 QRLHLIF-------------SHVTPTPSLVQSTLNFS--------PEAGRAI-------- 114
++ H I + + P+ +L +L+FS P R +
Sbjct: 66 EKFHSIIKDHYRKNPTNPNDAVLNPSLTLPALSLDFSQIDASRISPSVVRCVIEKCGSVR 125
Query: 115 --------LGFNHWLTQNANFSH-TDETLSFFTDYFGRRKDFK-AIH--DFLVDNKEVLG 162
L F +W T ++ + + D G+ + F A H D + +
Sbjct: 126 HGIPLHQSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEIS 185
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
+T I R VRAG ++ + F RME DYG D+ + +V+ L AS A+
Sbjct: 186 IETFTILIRRYVRAGLASEAVHCFNRME-DYGCVPDQIAFSIVISNLSRKRRASEAQSFF 244
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV---S 279
+ PD + L++GWC G++ EA+++ ++M G E Y+ ++D +
Sbjct: 245 DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 280 KLCRKKDPFR--LDS--------------------EAEKVLL---DMEYNGVPRNVETFN 314
++ R D F LDS EKVL M+ G + T+N
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYN 364
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LI C+ E+A+K+ M + C N +TF + + + + V M +M A
Sbjct: 365 FLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
Y + G + + + + + M P+ TY LL+T +C + A
Sbjct: 425 KCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNA 484
Query: 435 NALFDEAV 442
LF E V
Sbjct: 485 YKLFKEMV 492
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 9/282 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L R G + +G M R D S ++ LC+ A L+ + A FP
Sbjct: 154 LCRNGGVFEAMGLIREMGRK-SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFP 212
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ C L+ G C DG++DEA L M + GF+ V Y + +S C + R
Sbjct: 213 NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL---ISGFCNNGNLDR-- 267
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+++ +M G+ NV T++ L+ LC++ + ++A + M E G HP+ T+ L
Sbjct: 268 --GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 325
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L + R ++++ M G Y L+ LC + A + M G
Sbjct: 326 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 385
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
D TY+ LM C +VD+A LF+ N ++P +
Sbjct: 386 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 427
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 15/281 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + + L R G+ + M ++G D + +++ LC++G A++A L+
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMA-EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 344
Query: 224 --DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ E P + ++L+ G C +G + +A ++ R M G + V YN ++ L
Sbjct: 345 MVEKGEE--PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLM---KGL 399
Query: 282 CRKKDPFRLDSEAEKVLLDM--EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
C D ++D EA K+ M N + NV TFN+LI LCK R A+K+ +M +
Sbjct: 400 C---DKGKVD-EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G N T+ +L+ +A ++ E E+ ++ G+ Y + C + + A
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 515
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+F +M+T G NP Y+ LM C +++A +LF E
Sbjct: 516 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 556
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 108/252 (42%), Gaps = 18/252 (7%)
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
I ++++KG C +G + EA L REM R V+YN + ++ LC+ K EA
Sbjct: 146 IMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTL---INGLCKAKKL----KEA 198
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+LL+ME G N T L+ LCK R ++A++L M + G + + LI
Sbjct: 199 VGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISG 258
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ G E+ D M G + Y + LC + + ++A +V M G +PD
Sbjct: 259 FCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPD 318
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP----------- 463
TY L+ C R A L + V G E Y V L K
Sbjct: 319 VVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILR 378
Query: 464 IAVKKGKKRETL 475
+ ++KGKK + +
Sbjct: 379 MMIEKGKKADVV 390
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 123/280 (43%), Gaps = 10/280 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + + +V LC G A ++ A I PD LI G C DG+ A
Sbjct: 279 GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHA 338
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L M G E V YN +L S LC++ L +A K+L M G +V T
Sbjct: 339 MDLLNLMVEKGEEPSNVTYNVLL---SGLCKEG----LVIDAFKILRMMIEKGKKADVVT 391
Query: 313 FNVLISNLCKIRRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+N L+ LC + ++A+KLF M E PN TF +LI L + R+ + ++ +
Sbjct: 392 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRK 451
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G Y L +I++AM +++++ G P+S TY +L+ +C
Sbjct: 452 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 511
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
++ A LF E +G+ +Y L K ++++ K
Sbjct: 512 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 128/317 (40%), Gaps = 37/317 (11%)
Query: 142 GRRKDFKAIH-----DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFK 196
G KD +A H + +V+ E T + L + G RM + G K
Sbjct: 328 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL-RMMIEKGKK 386
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVK---DTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
D + +++ LC+ G A KL D N + P+ ++LI G C +G+L +A
Sbjct: 387 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 446
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-----------DSEAEKVLLD-- 300
++ R+M + G V YN +L K + K+ L +S +L+D
Sbjct: 447 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506
Query: 301 ---------------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
M +G+ + +N L+++LCK E A LF MG C P+
Sbjct: 507 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 566
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+F +I +A E+ +M G + + RL + +++A S E+
Sbjct: 567 ISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALER 626
Query: 406 MKTDGHNPDSETYDLLM 422
M G PD+ YD L+
Sbjct: 627 MVASGFTPDALVYDSLL 643
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 7/185 (3%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
GF + N +L LCR F EA ++ +M V ++ ++N LI+ LCK
Sbjct: 139 GFTVNVFIMNIVL---KGLCRNGGVF----EAMGLIREMGRKSVSPDIVSYNTLINGLCK 191
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
++ ++A+ L M GC PN T L+ L + R+ E E+++ MK G+
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL 251
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y ++ C +++ +F++M G + + TY L+ C + +AN + +
Sbjct: 252 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311
Query: 443 RNGVE 447
+G+
Sbjct: 312 EHGIH 316
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 9/251 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR IH +V T + ++AG+ + + ++++ D GF + +
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV-LDLGFVPNSFT 498
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++++ C+ + A+ L + + + P + L+ C +G L++AK L +EM
Sbjct: 499 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 558
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
E +++N ++D K F+ E + +++M G+ + TF+ LI+ L
Sbjct: 559 NANCEPDIISFNTMIDGT----LKAGDFQFVKELQMKMVEM---GLRPDALTFSTLINRL 611
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K+ ++A RM G P+ + L+K L E ++ +M + G + +
Sbjct: 612 SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDR 671
Query: 381 KDYYEFLTRLC 391
K LT LC
Sbjct: 672 KIVSTILTCLC 682
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 152/351 (43%), Gaps = 15/351 (4%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV---LGPKTLAS 168
RA+ FN +Q F+H + T S D R K F A+ L K +
Sbjct: 72 RALDIFNK-ASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLN 130
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
+ R +V+ F ++ K +++ + L ++G A KL+ +
Sbjct: 131 LMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHN 190
Query: 229 IF--PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCRKK 285
+ P+ I ++L+K C +G +D A R+ EM R G ++ Y+ ++DC+ R K
Sbjct: 191 LALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSK 250
Query: 286 DPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
EA ++ DM G+ + FNV+I+ C+ E A + M + GC+PN
Sbjct: 251 -------EAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPN 303
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ L+ + ++ E ++ D +K G + Y + LC I++AM +
Sbjct: 304 VYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLG 363
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+MK D+ TY++++ + R ++A + D+ GV + YR+
Sbjct: 364 EMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRI 414
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 150/359 (41%), Gaps = 16/359 (4%)
Query: 89 IFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSF--FTDYFGRRKD 146
+ + V P+ + + + LN ++G L L N + T F + + D
Sbjct: 153 VIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGD 212
Query: 147 ----FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
F+ + + T ++ +D L R + + FE M G D
Sbjct: 213 IDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIF 272
Query: 203 RLVVEKLCENGYASYAEKLVKD--TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ C +G A K++ D N P+ L+ G+C +GK+ EAK++ E+
Sbjct: 273 NVMINGFCRSGEVERA-KMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVK 331
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ G +L TV Y +++C LCR + EA K+L +M+ + + T+NV++ L
Sbjct: 332 KTGLKLDTVGYTTLMNC---LCRNGEI----DEAMKLLGEMKASRCRADALTYNVILRGL 384
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
RSE+A+++ + G G H N+ ++ +++ +L + + + + M G
Sbjct: 385 SSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHH 444
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ E + RLC E + V G P +++ ++ C ++ L D
Sbjct: 445 ATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKERKLVHVFELLD 503
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 9/233 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G + K I DF+ N ++ ++ + G+ + F+ +++ G K D
Sbjct: 283 GEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKT-GLKLDTVG 341
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC NG A KL+ + A+ D +++++G +G+ +EA ++ +
Sbjct: 342 YTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWG 401
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G L +Y IL+ LC + +A K L M G+ + T+N L+ L
Sbjct: 402 CEGVHLNKGSYRIILN---ALCCNGEL----EKAVKFLSVMSKRGIWPHHATWNELVVRL 454
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
C+ +E +++ G P ++ +++S+ + ++ E++D + S
Sbjct: 455 CESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKERKLVHVFELLDSLAS 507
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 180/447 (40%), Gaps = 48/447 (10%)
Query: 36 HYLNFLSKP--FSSKPTSNPKTIDDPDQVIARSLSGELLENLE--ADPLPISQRLHLIFS 91
H+ + LS P S+ S+ + DP+ + + E+ L DP +R FS
Sbjct: 16 HFFHSLSSPKTHHSRLFSSQTILQDPNSLSSSQYINEISRILSDFRDPHHDLERPLTAFS 75
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIH 151
TP LV+ L LGF+ +H+ K F I
Sbjct: 76 QKI-TPGLVEQVLKRCKN-----LGFS---------AHSS-------------KQFPLIW 107
Query: 152 DFLVDNKEV----LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
DFL D +E + P+ RA P + F +M D+G K + ++
Sbjct: 108 DFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMG-DFGVKAGVGDVDQLLY 166
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC+ + A++ E+ P+ K +L++GW G EA++L EM G +
Sbjct: 167 VLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVD 226
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
VAYN +L+ LC+ + EA K+ +M NG+ + ++++ I C++
Sbjct: 227 VVAYNSLLE---ALCKGGNV----DEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIH 279
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A ++ RM + PN T+ ++K L ++ +V E +++D M G + Y
Sbjct: 280 SAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQ 339
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C + +A+ + +M+ + PD TY++++ R D+ ++ G
Sbjct: 340 AFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFY 399
Query: 448 VKPKEYRVDPRYLKKPIAVKKGKKRET 474
Y V + KKGK E
Sbjct: 400 PAASTYAV----MVHGFCKKKGKLEEA 422
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 141/320 (44%), Gaps = 12/320 (3%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFER 188
+T S GRR D + I + L + K + L P T CI L RA R G F+
Sbjct: 236 KTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKE 295
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDG 247
M+ D G D + ++++ LC G A++L VK A+ PD L+ + G
Sbjct: 296 MD-DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVG 354
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
L+ KR EM G+ V Y +++ LC+ D R A +L M G+
Sbjct: 355 DLETVKRFWNEMEVDGYAPDVVTYTILIE---ALCKSGDVDR----AFDMLDVMTTKGIF 407
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N+ T+N +I L K RR ++A++L M G P ++++ I ++ + +
Sbjct: 408 PNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDT 467
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ MK G L L RI +A +F + G +PDS TY++LM +
Sbjct: 468 FETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSK 527
Query: 428 HNRVDKANALFDEAVRNGVE 447
++DKA L E + G E
Sbjct: 528 AGQIDKATQLLSEMISKGCE 547
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 10/317 (3%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ LV N + I L + + F++ ++ G +S +++ L
Sbjct: 749 EILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLG 808
Query: 212 NGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ + A +L +D + P++ +LL+ ++++ L EM G E +
Sbjct: 809 SNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAIT 868
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+N I+ + K L E L+ +++ P T+ LI L K RSE A+
Sbjct: 869 HNIIISALVKSNNLNKALDLYYE----LMSGDFSPTPC---TYGPLIDGLLKAGRSEQAM 921
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
K+F M ++GC PN + +LI ++ + E+ +M G K Y + L
Sbjct: 922 KIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECL 981
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C RI++A+ FE++K G +PD+ +Y+ ++ R+D+A +LF E G+ P
Sbjct: 982 CITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGIS--P 1039
Query: 451 KEYRVDPRYLKKPIAVK 467
Y + L IA K
Sbjct: 1040 DLYTYNALILHLGIAGK 1056
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 46/265 (17%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T ID L++AGR Q + FE M DYG + +++ ++G +A +L
Sbjct: 901 PCTYGPLIDGLLKAGRSEQAMKIFEEM-LDYGCGPNSVIYNILINGFGKSGEIDFACELF 959
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
K E I PD K +L++ C+ G++DEA + E+ G + TV+YN I++ + K
Sbjct: 960 KKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGK- 1018
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
RLD EA + +M+ G+ ++ T+N LI +L + + A+K++ + G
Sbjct: 1019 -----SRRLD-EALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGL 1072
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI-GKKDYYEFLTRLCGIERIEQAM 400
P+ T+ LI+ G+++ G KD QA
Sbjct: 1073 EPSVFTYNALIR---------------------GHSLSGNKD---------------QAF 1096
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKW 425
SVF+KM G +P++ET+ L K+
Sbjct: 1097 SVFKKMMVVGCSPNTETFAQLPNKY 1121
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
LL+ G+C +EA ++ + M G + Y+ ++ L R+ D ++ +
Sbjct: 210 LLLPGFC-----NEALKVYKRMISEGMKPSMKTYSALM---VALGRRGDTRKI----MNL 257
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L +M+ G+ N+ T+ + I L + RR +DA +F M + GC P+ T+ VLI +L
Sbjct: 258 LEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA 317
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
A ++ + E+ +M+++ ++ + Y + + + +E + +M+ DG+ PD T
Sbjct: 318 AGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVT 377
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y +L+ C VD+A + D G+
Sbjct: 378 YTILIEALCKSGDVDRAFDMLDVMTTKGI 406
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVK 223
T + +D+ + G V F+ ME D G+ D + +++E LC++G A + L
Sbjct: 342 TYITLMDKFGKVGDLETVKRFWNEMEVD-GYAPDVVTYTILIEALCKSGDVDRAFDMLDV 400
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T IFP+ + +I G +LDEA L M G + +Y +D K
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGK--- 457
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
DP ++A M+ G+ ++ N + L + R +A +F + + G P
Sbjct: 458 SGDP----AKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP 513
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +L+K +A ++ + +++ M S G + L R++ A +F
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF 573
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++K P TY++L+T ++ KA LF +G
Sbjct: 574 GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ +++I L++A L E+ G F Y ++D + K R +
Sbjct: 864 PNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSE----- 918
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A K+ +M G N +N+LI+ K + A +LF +M + G P+ ++ +
Sbjct: 919 --QAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L++ L R+ E + + +K G Y + L R+++A+S+F +MK G
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+PD TY+ L+ +VD A +++E G+E
Sbjct: 1037 ISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLE 1073
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 9/277 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L++A R + L E ME G K S L ++ ++G + A +
Sbjct: 412 TYNTMICGLLKARRLDEALELLENME-SLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET 470
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I P C+ + G++ EA+ + ++++ G +V YN ++ C SK
Sbjct: 471 MKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSK--- 527
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++D +A ++L +M G +V N LI+ L K R + A K+F R+ P
Sbjct: 528 ---AGQID-KATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAP 583
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ +L+ L + ++ + E+ M +G + L L + ++ A+ +F
Sbjct: 584 TVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMF 643
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+M NPD TY+ ++ R+D A F +
Sbjct: 644 CRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQ 680
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 133/330 (40%), Gaps = 42/330 (12%)
Query: 154 LVDNKEVLGPKTLASC----IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L++N E LG K A ID ++G P + + FE M++ G + + L
Sbjct: 432 LLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKR-GIMPSIAACNASLYTL 490
Query: 210 CENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
E G S AE + D + PD ++L+K + G++D+A +L EM G E
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550
Query: 269 VAYNCILDCVSKLCRKKDPFRLDS----------------------------EAEKVLLD 300
+ N +++ + K R +++ +A ++
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M +G P N TFN L+ L K + A+K+F RM C+P+ T+ +I L + R
Sbjct: 611 MTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR 670
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMS-VFEKMKTDGHNPDSE 416
+ +MK DY T + G+ R+E A+ V E + +S+
Sbjct: 671 IDYAFWFFHQMKK----FLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQ 726
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LM +++A + + V N V
Sbjct: 727 FWGELMECILTEAEIEEAISFAEILVCNSV 756
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G G+ ++A ++ EM G +V YN +++ K +D E +
Sbjct: 907 LIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGK------SGEIDFACE-LF 959
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G+ +++++ +L+ LC R ++A++ F + G P+ ++ +I L ++
Sbjct: 960 KKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKS 1019
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E + MK+ G + Y + L +++ A+ ++E+++ G P TY
Sbjct: 1020 RRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTY 1079
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
+ L+ D+A ++F + + G
Sbjct: 1080 NALIRGHSLSGNKDQAFSVFKKMMVVG 1106
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 136/346 (39%), Gaps = 13/346 (3%)
Query: 121 LTQNANFSHTDETLSFFTDYFG---RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAG 177
++Q NF HT + ++ + R +D + D L+ K + T I + +
Sbjct: 121 VSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFD-LMQKKVIYRNLTTYMTIFKALSIK 179
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKIC 236
F R + GF + S ++ L G+ + A K+ K +E + P K
Sbjct: 180 GGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTY 238
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
L+ G + L EM G Y C+ L R + R+D +A
Sbjct: 239 SALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTI---CIRALGRAR---RID-DAWG 291
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+ +M+ G +V T+ VLI LC + + A +L+ +M P+ T++ L+
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFG 351
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ + + M+ GYA Y + LC +++A + + M T G P+
Sbjct: 352 KVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLH 411
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
TY+ ++ R+D+A L + GV+ Y + Y K
Sbjct: 412 TYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGK 457
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 190/483 (39%), Gaps = 65/483 (13%)
Query: 18 PHRFISPQSTYFSRFSPTHYLNFLSK-------PFSSKPTSNPKTIDDPDQVIARSLSGE 70
PH I P + S +P NF + P DPD A +
Sbjct: 36 PH--IIPNQHFHSTQNPNSEFNFREGFERDEFVGLVADPGKREVFRRDPDGETALEVQNL 93
Query: 71 LLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQ---NANF 127
L ++ I LH ++ T LV L R F +W ++ + +
Sbjct: 94 LKTYRDSSVSEIEGALHQ--CRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGY 151
Query: 128 SHTDETLSFFTDYFGRRKDFK---AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLG 184
S + D GR + F + D + K ++ +T ++R A + + +
Sbjct: 152 SPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEAVK 211
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWC 244
F + + GF+ D + + ++ LC + AE L NE PD K ++++ GWC
Sbjct: 212 IFNK-RKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWC 270
Query: 245 VDGKLDEAKR-----------------------------------LAREMYRGGFELGTV 269
V G L EAKR L + M+ G
Sbjct: 271 VLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVA 330
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
NCI+D LC KK R+ EA +VL +M +V T+N LI +LCKI+R E
Sbjct: 331 ICNCIIDA---LCFKK---RI-PEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKV 383
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+L M + GC PN T+ L+KS + V +++RM+ G + D Y + +
Sbjct: 384 YELLDDMEQKGCLPNARTYGYLLKSTKKPEEV---PGILERMERNGCRMN-SDCYNLILK 439
Query: 390 LCGIERIEQAM-SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
L E + S ++M+ +G PD TY +++ R+D A + F + G+
Sbjct: 440 LYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVP 499
Query: 449 KPK 451
+P+
Sbjct: 500 EPR 502
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+++ +L+ + K +EA ++ + GFEL +A+ +L LCR K
Sbjct: 189 NERTFGVLLNRYAAAHKTEEAVKIFNKRKGLGFELDLIAFQTLL---MSLCRYKH----- 240
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
E + L + N P ++++ NV+++ C + +A + + + C P++ T+ +
Sbjct: 241 VEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIF 300
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I SL +A ++ ++ M G + LC +RI +A+ V +M
Sbjct: 301 INSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDC 360
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
PD TY+ L+ C R +K L D+ + G + Y + KKP V
Sbjct: 361 QPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEV 415
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 141/303 (46%), Gaps = 10/303 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VDN V G + +V + Q FF E D S ++++ CE G
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN--ENKSKVVLDVYSFGILIKGCCEAG 177
Query: 214 YASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ + L++ T P+ I LI G C G++++AK L EM + G Y
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+++ + K KK F + + M+ +GV N+ T+N +++ LCK R++DA ++
Sbjct: 238 VLINGLFKNGVKKQGFEMYEK-------MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M E G N T+ LI L + ++ E ++++D+MKS G Y + CG
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+ ++ +A+S+ +K+ G +P TY++L++ +C A + E G++
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 453 YRV 455
Y +
Sbjct: 411 YTI 413
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 9/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
ID + G + F M + G ++ + +++ L +NG E K +
Sbjct: 205 IDGCCKKGEIEKAKDLFFEMGK-LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FP+ + ++ C DG+ +A ++ EM G V YN + + LCR+
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL---IGGLCRE---M 317
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L+ EA KV+ M+ +G+ N+ T+N LI C + + A+ L + G P+ T+
Sbjct: 318 KLN-EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ + +M+ M+ G K Y + + +E+A+ + M+
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G PD TY +L+ +C ++++A+ LF V E
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +++L + GR F+ M R+ G + + ++ LC + A K+V
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ I P+ + LI G+C GKL +A L R++ G V YN + VS CR
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL---VSGFCR 385
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K D S A K++ +ME G+ + T+ +LI + E AI+L M E G P
Sbjct: 386 KGDT----SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ VLI ++ E + M + Y + C +A+ +
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M+ P+ +Y ++ C + +A L ++ + +G++
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 18/324 (5%)
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
V +T I+ L + G Q +E+M+ D G + + V+ +LC++G A
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQED-GVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 220 KLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD-- 276
++ + + + + LI G C + KL+EA ++ +M G + YN ++D
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 277 C-VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
C V KL +A + D++ G+ ++ T+N+L+S C+ + A K+
Sbjct: 349 CGVGKL----------GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E G P++ T+ +LI + ++ + + ++ M+ G Y + C +
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ +A +F+ M P+ Y+ ++ +C +A L E + YR
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 456 DPRYLKKPIAVKKGKKRETLPEKM 479
L K +K K+ E L EKM
Sbjct: 519 MIEVLCKE---RKSKEAERLVEKM 539
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LI G+C+ G+++EA RL + M E V YN + + C++ +
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM---ILGYCKEGSSY 495
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A K+L +ME + NV ++ +I LCK R+S++A +L +M + G P+ T+
Sbjct: 496 R----ALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS-TSI 550
Query: 349 LVLI 352
L LI
Sbjct: 551 LSLI 554
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 170 IDRLVRAGRPTQVLGF-FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TAN 227
I+ V++GR + F +++M ++ G + D + ++ LC+ G A +V D +AN
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKN-GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN 409
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P+ L+ G+C +L+EA + EM GFEL + YN +L + K K P
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCK--NGKVP 467
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
LD E M G ++ TFN LI LCK+ R EDA+ L+ M G N T
Sbjct: 468 KALDMLGE-----MSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVT 522
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ LI + + + E ++++ M G + + Y + C + E+A+ +F++M
Sbjct: 523 YNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMV 582
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P + + +LL+ C +V A L + + G+
Sbjct: 583 RKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGL 621
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 170/416 (40%), Gaps = 46/416 (11%)
Query: 90 FSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA 149
F+ +TP L AI W + HT + D G K+FK
Sbjct: 64 FNQITPFQLCKLLLLPLDVSTSMAIF---QWAGSQKGYCHTFDVYHVLIDKLGAAKEFKV 120
Query: 150 IHDFLVDNKE--VLGPKTLASCIDRLV-RAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
I L+ KE + ++L CI + RA P Q M+ Y + S +V+
Sbjct: 121 IDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVL 180
Query: 207 EKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ L S A + + ++ + P +++K C+ ++D A L R+M + G
Sbjct: 181 DILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCV 240
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+V Y ++ +SK R +EA K+L +M G +V+TFN +I LC++ R
Sbjct: 241 PNSVVYQTLIHALSKRDRV-------NEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNR 293
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS----------AG 375
+ KL RM G PN+ T+ VL+ L + +V E +++++ + G
Sbjct: 294 IHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILING 353
Query: 376 YAIGKK-------------------DYYEFLTRLCGIER---IEQAMSVFEKMKTDGHNP 413
Y + D + F T + G+ + + A+ + M +G P
Sbjct: 354 YVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTP 413
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+ TY L+ +C N++++A + +E G E+ Y V R L K V K
Sbjct: 414 NLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKA 469
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 8/253 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GF+ + +++ LC+NG A ++ + +++ PD + LI G C + ++A
Sbjct: 445 GFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDA 504
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L R+M G TV YN ++ + + EA K++ DM + G P + T
Sbjct: 505 LALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQ-------EALKLVNDMLFRGCPLDEIT 557
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI CK+ +E A+ LF M P+ + +LI L + +V E++ M
Sbjct: 558 YNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMI 617
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G A Y + LC + I +A ++F K++ +G PD+ TY+ L+ C D
Sbjct: 618 HRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFD 677
Query: 433 KANALFDEAVRNG 445
A L V N
Sbjct: 678 DAYLLLLRGVENA 690
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 128/304 (42%), Gaps = 14/304 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L + R + L E M G D D+ V+ LC KLV
Sbjct: 250 IHALSKRDRVNEALKLLEEMFL-MGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRG 308
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F P+D +L+ G C GK+DEA+ L ++ V + +++ K
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPN----DVHFTILINGYVK------SG 358
Query: 289 RLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RLD EA L D M NG +V TFN LI LCK A+ + M GC PN T
Sbjct: 359 RLD-EANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLIT 417
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ + ++ E +++ M + G+ + Y L LC ++ +A+ + +M
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMS 477
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVK 467
G PD T++ L+ C +R + A AL+ + + +GV Y + A++
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQ 537
Query: 468 KGKK 471
+ K
Sbjct: 538 EALK 541
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 137/329 (41%), Gaps = 15/329 (4%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV---LGPKTLASCIDRL 173
F WL +F+ + + R + F + D + + L P T ++ I
Sbjct: 104 FLAWLRAKPSFAASADHFDALLLPLARARLFTHLWSLAADMRALGLPLSPSTFSAVISSY 163
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPD 232
++ Q + F R+ R +G + +++ LC NG + A KL++ A + + PD
Sbjct: 164 GQSRLTDQAVEVFNRLPR-FGCPQTTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPD 222
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
L+ WC GKL EA+ +M GF + ++D + + R +
Sbjct: 223 RATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLE------- 275
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA+ L M GV +V TFN L LC E A+ L G P+ +T+ V+I
Sbjct: 276 EAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMI 335
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
++ +A R+ E + G+ Y + LC R A + F MK+ GH
Sbjct: 336 PAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHP 395
Query: 413 PDSETYDLLMTKWCAHNR--VDKANALFD 439
P+ Y +++ K C V+ AN L +
Sbjct: 396 PNRPVY-VMLVKMCVRGGRFVEAANYLVE 423
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 12/221 (5%)
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
LA +M G L ++ ++ + RL +A +V + G P+ + +N
Sbjct: 140 LAADMRALGLPLSPSTFSAVISSYGQS-------RLTDQAVEVFNRLPRFGCPQTTQVYN 192
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L+ LC A KL RM G P+ TF L+ + A ++ E +D M
Sbjct: 193 ALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAER 252
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G+ + + L R+E+A + +M +G PD T++ L C+ V+ A
Sbjct: 253 GFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFA 312
Query: 435 NALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
AL +A G+ Y+V P K G+ E
Sbjct: 313 VALLADASSRGLCPDISTYKV-----MIPAVAKAGRIDEAF 348
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 81/204 (39%), Gaps = 7/204 (3%)
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
D+A + + R G T YN +LD LC + A K+L M GV +
Sbjct: 170 DQAVEVFNRLPRFGCPQTTQVYNALLDA---LCANGS----FAGAYKLLRRMARKGVAPD 222
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
TF+ L+ C + +A M E G HP +L+ L +A R+ E
Sbjct: 223 RATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFAL 282
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
RM G + LC +E A+++ + G PD TY +++
Sbjct: 283 RMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAG 342
Query: 430 RVDKANALFDEAVRNGVEVKPKEY 453
R+D+A LF A+ +G P Y
Sbjct: 343 RIDEAFRLFYAALEDGHRPFPSLY 366
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 9/187 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D LVRAGR + F RM ++ G D + + E LC +G +A L+ D ++
Sbjct: 265 VDGLVRAGRLEEAKAFALRMTKE-GVLPDVATFNSLAEALCSSGDVEFAVALLADASSRG 323
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++I G++DEA RL G Y I+ + K R D F
Sbjct: 324 LCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAF 383
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
DM+ G P N + +L+ + R +A M E G P TF
Sbjct: 384 -------AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGFAPRAPTF 436
Query: 349 LVLIKSL 355
++ L
Sbjct: 437 NSVVDGL 443
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 137/329 (41%), Gaps = 15/329 (4%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV---LGPKTLASCIDRL 173
F WL +F+ + + R + F + D + + L P T ++ I
Sbjct: 100 FLAWLRAKPSFAASADHFDALLLPLARARLFTHLWSLAADMRALGLPLSPSTFSAVISSY 159
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPD 232
++ Q + F R+ R +G + +++ LC NG + A KL++ A + + PD
Sbjct: 160 GQSRLTDQAVEVFNRLPR-FGCPQTTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPD 218
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
L+ WC GKL EA+ +M GF + ++D + + R +
Sbjct: 219 RATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLE------- 271
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA+ L M GV +V TFN L LC E A+ L G P+ +T+ V+I
Sbjct: 272 EAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMI 331
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
++ +A R+ E + G+ Y + LC R A + F MK+ GH
Sbjct: 332 PAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHP 391
Query: 413 PDSETYDLLMTKWCAHNR--VDKANALFD 439
P+ Y +++ K C V+ AN L +
Sbjct: 392 PNRPVY-VMLVKMCVRGGRFVEAANYLVE 419
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 12/221 (5%)
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
LA +M G L ++ ++ + RL +A +V + G P+ + +N
Sbjct: 136 LAADMRALGLPLSPSTFSAVISSYGQS-------RLTDQAVEVFNRLPRFGCPQTTQVYN 188
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L+ LC A KL RM G P+ TF L+ + A ++ E +D M
Sbjct: 189 ALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAER 248
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G+ + + L R+E+A + +M +G PD T++ L C+ V+ A
Sbjct: 249 GFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFA 308
Query: 435 NALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
AL +A G+ Y+V P K G+ E
Sbjct: 309 VALLADASSRGLCPDISTYKV-----MIPAVAKAGRIDEAF 344
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 81/204 (39%), Gaps = 7/204 (3%)
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
D+A + + R G T YN +LD LC + A K+L M GV +
Sbjct: 166 DQAVEVFNRLPRFGCPQTTQVYNALLDA---LCANGS----FAGAYKLLRRMARKGVAPD 218
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
TF+ L+ C + +A M E G HP +L+ L +A R+ E
Sbjct: 219 RATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFAL 278
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
RM G + LC +E A+++ + G PD TY +++
Sbjct: 279 RMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAG 338
Query: 430 RVDKANALFDEAVRNGVEVKPKEY 453
R+D+A LF A+ +G P Y
Sbjct: 339 RIDEAFRLFYAALEDGHRPFPSLY 362
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 9/187 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D LVRAGR + F RM ++ G D + + E LC +G +A L+ D ++
Sbjct: 261 VDGLVRAGRLEEAKAFALRMTKE-GVLPDVATFNSLAEALCSSGDVEFAVALLADASSRG 319
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++I G++DEA RL G Y I+ + K R D F
Sbjct: 320 LCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAF 379
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
DM+ G P N + +L+ + R +A M E G P TF
Sbjct: 380 -------AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGFAPRAPTF 432
Query: 349 LVLIKSL 355
++ L
Sbjct: 433 NSVVDGL 439
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 138/293 (47%), Gaps = 9/293 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I L +GR + L F M ++ G + + + ++++ LC+ A K++
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + + + P + LI G+C +G +D+A + M T YN + + LC
Sbjct: 359 EMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYN---ELICGLC 415
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+K+ + A +L M + ++ T+N LI CK+ E A +L M E G
Sbjct: 416 KKRKVHK----AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P++ T+ V I +L + RV E + D +K+ G + Y + C + +I+ A S+
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E+M D P+S TY++L+ C ++ +A++L + + GV+ Y +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 173/419 (41%), Gaps = 48/419 (11%)
Query: 34 PTHYLNFLSKPFSSKPTSNPKTID-DPDQVIARSLSGELLENLEADPLPISQRLHLIFSH 92
P YL L KP+SS S P+ + D + V LS +LL L P Q+ H
Sbjct: 10 PGEYLLILLKPYSS-IASLPQILSLDSEPV---DLSAQLLSILSR---PNWQK-HPSLRK 61
Query: 93 VTP--TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
+ P TPS V S F+ + A+ FN W+ F H + S + R +
Sbjct: 62 LLPSLTPSHVSSLFAFNLDPQTALSFFN-WIALRPGFKHNVHSYSSMLNILIRAR----- 115
Query: 151 HDFLVDNKEVLGPKTLASCI---DRLVRAGRPTQVLGFFERMERDYGFK-----RDKDSL 202
L+ E + + SC D L VL F +M D FK R +++
Sbjct: 116 ---LLGVAEKIRISMIKSCCSIEDVLF-------VLEVFRKMNADGEFKFKPTLRCYNTI 165
Query: 203 RLVVEK--LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+ + K L + Y E L N+I P+ + ++ G+C G + EA+ A ++
Sbjct: 166 LMSLSKFLLIDEMKTVYLELL----NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV 221
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ G T Y + + CR K A +V L M G RN ++ LI L
Sbjct: 222 QAGLHPDTFTYTSL---ILGHCRNKGV----DNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C+ R +A+KLF M E C P T+ VLI +L + R E + + MK G
Sbjct: 275 CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNV 334
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + LC ++++A + +M G P TY+ L+ +C +D A + D
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
G +R++ S ++ LCE G + A KL D T + P + +LI G+ EA
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L EM G E Y ++D LC++ ++D EA K+L +M G+ +V T
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLID---GLCKEN---KMD-EARKMLSEMSEKGLIPSVVT 371
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI CK +DA ++ M C PN T+ LI L + +V + ++++M
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y + C + +E A + M +G PD TY + + C RV+
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491
Query: 433 KANALFDEAVRNGVEVKPKEY 453
+A LFD GV+ Y
Sbjct: 492 EAGTLFDSVKAKGVKANEVIY 512
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 121/306 (39%), Gaps = 59/306 (19%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL 238
P L FF + GFK + S Y+S L++ A + +KI
Sbjct: 81 PQTALSFFNWIALRPGFKHNVHS------------YSSMLNILIR--ARLLGVAEKIRIS 126
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGG---FELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+IK C + + R+M G F+ YN IL +SK F L E +
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSK-------FLLIDEMK 179
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKI-------------------------------- 323
V L++ N + N+ TFN +++ CKI
Sbjct: 180 TVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH 239
Query: 324 ---RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ ++A ++F M + GC NE ++ LI L +A R+ E ++ M
Sbjct: 240 CRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ Y + L G R +A+++F +MK G P+ TY +L+ C N++D+A + E
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 441 AVRNGV 446
G+
Sbjct: 360 MSEKGL 365
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 9/229 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD + I C +G+++EA L + G + V Y ++D K+ +
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+ L E++L D N T+NVLI LCK ++ ++A L +M G P
Sbjct: 528 AYSL---LERMLND----ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +LI + + ++ + M S GY Y FL +E+ V KM
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+G PD TY +L+ + +A V G KP Y V
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG--CKPSLYIV 687
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 124/335 (37%), Gaps = 59/335 (17%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L + GR + F+ ++ G K ++ +++ C+ G A L++ N+
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAK-GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK-------- 280
P+ ++LI+G C + K+ EA L +M G + V Y ++ + K
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Query: 281 --------------LCRKKDPFR------LDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+C + E + V+ M G+ ++ T+ VLI
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE----------------- 363
++ + A M + GC P+ +LIK+L R+ E
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVD 719
Query: 364 ------------GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
++ ++M G I Y + C ER+E+A + MK G
Sbjct: 720 IADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM 779
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+P + Y+ L+ C +A L D V NG+
Sbjct: 780 SPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGL 814
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 8/239 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G D+ + + ++ LC+ G A L A + ++ I LI G+C GK+D A
Sbjct: 469 GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVA 528
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L M + YN +++ LC++K EA ++ M GV V T
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIE---GLCKEKKM----KEASSLVAKMLTMGVKPTVVT 581
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +LI + K + A+K+F M G P+ T+ + + + + E D++I +M
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G Y + + +A + M G P +L+ NR+
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRM 700
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D I LI G+C +L+EA+ L M G YN +LDC KL +
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL-------GVY 799
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+EA +++ M NG+ +E++ +L+ L +E A +F+ + G + +E + VL
Sbjct: 800 AEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVL 859
Query: 352 IKSLYQAARVGEGDEMIDRMK 372
I L + V E E+ID M+
Sbjct: 860 IDGLLKRDLVDECSELIDIME 880
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ +V I+++ K E A+KLF +M E GC + + + LI Q R+ E
Sbjct: 708 GIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 767
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ MK G + + Y L C + +A+ + + M +G P E+Y LL+
Sbjct: 768 QGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCG 827
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+KA A+F + G ++V
Sbjct: 828 LYIEGSNEKAKAVFHGLLSCGYNYDEVAWKV 858
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A K+ M +G +V + LI+ C+ R E+A L + M E G P+E + L+
Sbjct: 732 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDG 410
+ E ++D M G + + Y+ L +CG+ E+A +VF + + G
Sbjct: 792 CCCKLGVYAEAVRLVDAMVENGL-LPLLESYKLL--VCGLYIEGSNEKAKAVFHGLLSCG 848
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFD 439
+N D + +L+ + VD+ + L D
Sbjct: 849 YNYDEVAWKVLIDGLLKRDLVDECSELID 877
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 159/337 (47%), Gaps = 14/337 (4%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWL-TQNANFSHTDETLSFFTDYFGRRKDFKA 149
S V T + S L + ++ LGF W ++ +SHT + D G+ +
Sbjct: 81 SEVRLTSGVADSLLRRCGDDWKSALGFFLWAQSRGGGYSHTPCACNRMVDLLGKMRQIDR 140
Query: 150 IHDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
+ D L + + ++ T+A I RL A R + F+++E D G +R+ +++ ++++
Sbjct: 141 MWDLLSEMHCRGLVTVDTIAKSIRRLAAARRWRDAILLFDQLE-DLGLERNTETMNVLLD 199
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC+ A ++ + I PD ++ + GWC ++DEA EM GF
Sbjct: 200 ALCKERKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSVRRIDEAMWTIEEMKNRGFPPI 259
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ Y +L+ C++++ FR ++L M G NV T+ +++++L K R E
Sbjct: 260 VITYTAVLE---AYCKQRN-FR---RVYEILDSMSSQGCHPNVITYTMIMTSLTKCERFE 312
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK--DYYE 385
+A+ + RM GC P+ + LI L +A + E +++ R++ + + Y
Sbjct: 313 EALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVF-RVEMPRNVVPRNVATYNT 371
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ LC R + A+ V ++M+ PD +TY L+
Sbjct: 372 MISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLL 408
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G E T N +LD LC+++ E + + M + + TFN+ + C
Sbjct: 186 GLERNTETMNVLLD---ALCKERK-----VELAREVFVMLSPHIAPDAYTFNIFVHGWCS 237
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+RR ++A+ M G P T+ ++++ + E++D M S G
Sbjct: 238 VRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVIT 297
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y +T L ER E+A+SV ++MK+ G PD+ Y+ L+ + +AN +F
Sbjct: 298 YTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVF 353
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+E G+ RN ET NVL+ LCK R+ E A ++F + P+ TF + + R
Sbjct: 182 LEDLGLERNTETMNVLLDALCKERKVELAREVFVMLSP-HIAPDAYTFNIFVHGWCSVRR 240
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E I+ MK+ G+ Y L C + + + M + G +P+ TY +
Sbjct: 241 IDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYTM 300
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
+MT R ++A ++ D +G +
Sbjct: 301 IMTSLTKCERFEEALSVSDRMKSSGCK 327
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL-LDMEYNGV 306
+ +EA ++ M G + T+ YN + ++ L R F EA +V ++M N V
Sbjct: 310 RFEEALSVSDRMKSSGCKPDTLFYNAL---INLLGRAGHLF----EANQVFRVEMPRNVV 362
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY-QAARVGEGD 365
PRNV T+N +IS LC+ R +DA+ + M C P+ T+ L++ L+ + + G
Sbjct: 363 PRNVATYNTMISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLLRLLFGRRGQTGAIH 422
Query: 366 EMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ ++ G + Y + LC + + A ++++M P +T +LL+++
Sbjct: 423 HLLSELRDRNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSEIVPRPKTCELLLSE 482
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 136/303 (44%), Gaps = 16/303 (5%)
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
F+VDN T I R G T+ L +F R+ D G + + + ++E LC+
Sbjct: 236 FVVDNA------TFTLIISRFSGKGYTTRALWYFRRLV-DMGLEPNLINFTCMIEGLCKR 288
Query: 213 GYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVA 270
G A +++++ + + P+ LI G C G ++A RL ++ R + +
Sbjct: 289 GSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 348
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y + +S CR+ R AE +L M+ G+ N T+ LI CK E A
Sbjct: 349 YTAM---ISGYCREDKLNR----AEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAY 401
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
L M G PN T+ ++ L + RV E +M++ G K Y ++
Sbjct: 402 DLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEH 461
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C E I QA+++F KM G PD +Y L+ +C NR+ ++ F+EAVR G+
Sbjct: 462 CKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTN 521
Query: 451 KEY 453
K Y
Sbjct: 522 KTY 524
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 8/283 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L + G + F ++ R K + + ++ C + AE L+
Sbjct: 312 THTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSR 371
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI G C G + A L M GF YN I V+ LC+
Sbjct: 372 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAI---VNGLCK 428
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA K+L D NG+ + T+N+L+S CK A+ LF +M + G P
Sbjct: 429 RGRV----QEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQP 484
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ LI + R+ E + + G K Y + C + AM F
Sbjct: 485 DIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFF 544
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ G PDS TY +++ C ++ D+A +L+D + G+
Sbjct: 545 HRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGL 587
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 173/436 (39%), Gaps = 52/436 (11%)
Query: 83 SQRLHL-IFSHVTPTPSLVQSTLNFSPEAGRAI-LGFNHW-------------------- 120
SQRLH I V + + +AG + L F HW
Sbjct: 65 SQRLHFGIEVDFLTHEQAVSVVASLASDAGSMVTLSFFHWAIGYPKFRHFMRLYIVCAMS 124
Query: 121 LTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD-NKEVLGPKTLASCIDRLVRAGRP 179
L N N E + + F K + +++ + + L P T ++ +++
Sbjct: 125 LIGNRNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRT--LNWIIKV--- 179
Query: 180 TQVLGFFERMERDY------GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-D 232
T +G E E + G + D S R++V C+ G A+K + F D
Sbjct: 180 TSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVD 239
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ L+I + G A R + G E + + C+++ LC++
Sbjct: 240 NATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIE---GLCKRGSI----K 292
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVL 351
+A ++L +M G NV T LI LCK +E A +LF ++ H PN T+ +
Sbjct: 293 QAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAM 352
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + ++ + ++ RMK G Y + C E+A + M ++G
Sbjct: 353 ISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGF 412
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+P+ TY+ ++ C RV +A + ++ +NG +KP ++ + I + + K
Sbjct: 413 SPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNG--LKPDKFTYN-------ILMSEHCK 463
Query: 472 RETLPEKMARKRRRLK 487
+E + + +A + LK
Sbjct: 464 QENIRQALALFNKMLK 479
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 124/276 (44%), Gaps = 8/276 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + ID L + G + F ++ + +K + + +++ C G + AE L V+
Sbjct: 180 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 239
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ LI G C G D A L +M + GF YN ++D C+
Sbjct: 240 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID---GFCK 296
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA KVL G+ + T+ +LI+ CK A+ LF RM E GC P
Sbjct: 297 KGKI----QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 352
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + LI + Q ++ E + D+ G K+ Y + C + R A+ VF
Sbjct: 353 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF 412
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
E+M +G DS TY L++ C +R+++A AL++
Sbjct: 413 ERMVQNGCFADSITYGALISGLCKESRLEEAKALYE 448
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 31/302 (10%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKDTANEIFPDD 233
R G+ +V M R YGF D + +VV LCE G + +E + P+
Sbjct: 85 REGKVEEVDALLAAMWR-YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNV 143
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD-- 291
I G C + +A + EM G + + ++D + K+ + FRL
Sbjct: 144 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLK 203
Query: 292 ---------------------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ AE +L+ M G+ N T+ LI CK
Sbjct: 204 LIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGG 263
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ A +L +M + G PN T+ +I + ++ E +++ S G K Y
Sbjct: 264 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYT 323
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+T C I A+ +F++M +G PD E Y L++ +C +++++ FD+ +
Sbjct: 324 ILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMI 383
Query: 445 GV 446
G+
Sbjct: 384 GL 385
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 8/225 (3%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D+ C ++++ C G+ + R M G V Y +D LC++ R
Sbjct: 107 DNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWID---GLCKR----RYV 159
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLV 350
+A VL +M G+ NV T LI LCKI +E A +LF ++ + + PN T+ V
Sbjct: 160 KQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 219
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I + ++ + ++ RM G Y + C ++A + KMK +G
Sbjct: 220 MIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEG 279
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+ TY+ ++ +C ++ +A + A G++ Y +
Sbjct: 280 FLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 324
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 113/320 (35%), Gaps = 65/320 (20%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKL 249
R +G ++ V+ E G YA K+ T + P ++ L+ C +GK+
Sbjct: 30 RSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKV 89
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF--------------------- 288
+E L M+R GF L ++ + + R KD
Sbjct: 90 EEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAW 149
Query: 289 -------RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF-------- 333
R +A VL +M G+ NV T LI LCKI +E A +LF
Sbjct: 150 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSS 209
Query: 334 ----------------------------YRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
RM E G PN T+ LI +
Sbjct: 210 YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 269
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
E++++MK G+ Y + C +I++A V + G D TY +L+T+
Sbjct: 270 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEH 329
Query: 426 CAHNRVDKANALFDEAVRNG 445
C + A LFD V NG
Sbjct: 330 CKQGHITYALDLFDRMVENG 349
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 7/198 (3%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+L EA + EM G L N +L ++ + F A KV M GV
Sbjct: 17 GRLPEAADMVLEMRSHGLPLCVETANWVL----RVGLETGSF---VYARKVFDGMTRAGV 69
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
F L+ C+ + E+ L M +G + T V+++SL + R + E
Sbjct: 70 SPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 129
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
RM G +Y ++ LC ++QA V E+M G P+ T+ L+ C
Sbjct: 130 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 189
Query: 427 AHNRVDKANALFDEAVRN 444
++A LF + +++
Sbjct: 190 KIGWTERAFRLFLKLIKS 207
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 9/208 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + ID + G+ + RM G K DK + +++ + C+ G+ +YA L +
Sbjct: 286 TYNAVIDGFCKKGKIQEAYKVL-RMATSQGLKFDKITYTILITEHCKQGHITYALDLFDR 344
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N PD + LI +C +++E+++ + G Y ++ K+ R
Sbjct: 345 MVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGR 404
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A +V M NG + T+ LIS LCK R E+A L+ M + P
Sbjct: 405 -------STLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 457
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRM 371
E T + L + + ++DR+
Sbjct: 458 CEVTRVTLTFEYCRREKTSIAVSVLDRL 485
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S ID L + + T+ F +M G D + ++ LC + L+
Sbjct: 211 TSIIDSLCKDRQVTEAFNLFSKMVGQ-GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N +I PD I ++ C +GK+ EA + M G E V YN ++D C +
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD---GHCLQS 326
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ EA KV M +NG NV ++N LI+ CKI+R + A LF M + PN
Sbjct: 327 EM----DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ L+ L R+ + + M + G Y L LC +++AM++ +
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ +PD + Y +++ C ++ A +F G+ + Y +
Sbjct: 443 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 492
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 11/291 (3%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDE 251
+G D +L +++ C +A L K + PD LI+G CV+GK+ +
Sbjct: 96 FGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGD 155
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L +M GF+ V Y +++ + K+ RL L ME +V
Sbjct: 156 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRL-------LRSMEQGNCQPDVV 208
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+ +I +LCK R+ +A LF +M G P+ T+ LI SL ++++M
Sbjct: 209 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 268
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
++ + + LC +I +A V + M G P+ TY+ LM C + +
Sbjct: 269 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 328
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
D+A +FD V NG Y + +++ K L E+M +K
Sbjct: 329 DEAVKVFDTMVHNGYAPNVISYNT---LINGYCKIQRMDKATYLFEEMCQK 376
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 9/299 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L G+ L F++M + GF+ + + ++ LC+ G + A +L++
Sbjct: 139 TFTTLIRGLCVEGKIGDALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTNAAIRLLRS 197
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD + +I C D ++ EA L +M G Y ++ + LC
Sbjct: 198 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 257
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K +L M + + +V F+ ++ LCK + +A + M G P
Sbjct: 258 WK-------HVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 310
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ L+ + + E ++ D M GYA Y + C I+R+++A +F
Sbjct: 311 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 370
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
E+M P++ TY+ LM C R+ A ALF E V +G YR+ YL K
Sbjct: 371 EEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 429
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
TV +N +L ++K + F L ++ M+ G+P +V T N+LI++ C + R
Sbjct: 67 TVDFNRLLTSIAKTKQYPTVFSLSNQ-------MDSFGIPPDVYTLNILINSFCHLNRPG 119
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A + ++ + G P+ TF LI+ L ++G+ + D+M G+ Y +
Sbjct: 120 FAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLI 179
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
LC + A+ + M+ PD Y ++ C +V +A LF + V G+
Sbjct: 180 NGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS 239
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 114/276 (41%), Gaps = 23/276 (8%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D ++ G V+ + M+ + + + D V + + NGYA
Sbjct: 300 VDMMIIRGVEPNVVTYNALMD-GHCLQSEMDEAVKVFDTMVHNGYA-------------- 344
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P+ + LI G+C ++D+A L EM + TV YN ++ + + R +D
Sbjct: 345 -PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIA 403
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
L E M +G ++ T+ +L+ LCK ++A+ L + P+ +
Sbjct: 404 LFHE-------MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYT 456
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++I + +A + ++ + S G + Y + LC +++A +F +M +
Sbjct: 457 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGN 516
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G +PD TY+ + + +A L E + G
Sbjct: 517 GCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 9/197 (4%)
Query: 205 VVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC G A L + A+ PD +L+ C LDEA L + +
Sbjct: 388 LMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 447
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ Y ++D +CR + A + ++ G+ NV T+ ++I+ LC+
Sbjct: 448 MDPDIQIYTIVID---GMCRAGEL----EAARDIFSNLSSKGLRPNVRTYTIMINGLCRR 500
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
++A KLF M GC P+ T+ + + L Q +++ M + G++
Sbjct: 501 GLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTT 560
Query: 384 YEFLTRLCGIERIEQAM 400
+ LC ++++Q++
Sbjct: 561 TLLVEMLCD-DKLDQSV 576
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 51/127 (40%)
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+DA+ F RM P+ F L+ S+ + + + ++M S G
Sbjct: 49 DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 108
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ C + R A SV K+ G PD+ T+ L+ C ++ A LFD+ + G
Sbjct: 109 INSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF 168
Query: 447 EVKPKEY 453
+ Y
Sbjct: 169 QPNVVTY 175
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 126/252 (50%), Gaps = 12/252 (4%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
L+V +L E + + L+K+ I PD ++L+ G C +G++ +A+ + M + G
Sbjct: 250 LIVGRLKE-AVGLFNQMLLKN----IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQG 304
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V YN ++D + + +++A V M GV +V++++++I+ LCK
Sbjct: 305 VDSNIVTYNSLMDGYFLV-------KQENKATFVFNTMARRGVTPDVQSYSIMINGLCKT 357
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ ++A+ LF M PN T+ LI L + R+ + ++++ M + G Y
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 417
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
L LC ++++A+++ K+K G P+ TY +L+ C + R+ A A++ + +
Sbjct: 418 SSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLI 477
Query: 444 NGVEVKPKEYRV 455
G + K Y V
Sbjct: 478 KGYHLDVKMYNV 489
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + ++I G C +DEA L +EM+ TV YN ++D + K R D +
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAW 399
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L +E M G P +V T++ L+ LCK + + AI L ++ + G PN T+
Sbjct: 400 DLVNE-------MHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTY 452
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ L + R+ + + + GY + K Y + LC ++A+S+ KM+
Sbjct: 453 TILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMED 512
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+G PD+ TY+ L+ +++ DKA L E + G V
Sbjct: 513 NGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAV 552
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 138/331 (41%), Gaps = 28/331 (8%)
Query: 129 HTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFER 188
+ D+ +S F R + I +F K L+S LV+ + F ++
Sbjct: 43 NVDDAVSSFNHILHMRNPVQPIFEF---------NKILSS----LVKLNHFHTAISFSKQ 89
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDG 247
ME + D + +++ C G+ ++A ++ F PD LIKG C++G
Sbjct: 90 MELK-QIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNG 148
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K+ EA ++ GF L V+Y + ++ LC+ + A +VL ++ V
Sbjct: 149 KVREALHFHDDVIAKGFHLDQVSYGTL---INGLCKTGET----RAALQVLRKIDGLLVQ 201
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
NV +N +I +LCK + A L M P+ T+ LI R+ E +
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261
Query: 368 IDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++M K D Y F + LC +++A +V M G + + TY+ LM
Sbjct: 262 FNQMLLKNI---KPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDG 318
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ + +KA +F+ R GV + Y +
Sbjct: 319 YFLVKQENKATFVFNTMARRGVTPDVQSYSI 349
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 138/361 (38%), Gaps = 44/361 (12%)
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRL 173
I FN L+ +H +SF ++ + K I ++ L +C L
Sbjct: 64 IFEFNKILSSLVKLNHFHTAISF-----SKQMELKQIQ------PDLFTFNILINCFCHL 112
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD 233
VL ++ GF D ++ +++ LC NG A D + F D
Sbjct: 113 GHLNFAFSVLAKIFKL----GFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLD 168
Query: 234 KIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK---------LCR 283
++ LI G C G+ A ++ R++ + V YN I+D + K LC
Sbjct: 169 QVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCS 228
Query: 284 KKDPFRLD-------------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ R+ EA + M + +V TFN+L+ LCK
Sbjct: 229 EMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEG 288
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ A + M + G N T+ L+ + + + + + M G + Y
Sbjct: 289 EMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYS 348
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ LC + +++A+++F++M + P++ TY+ L+ + R+ A L +E
Sbjct: 349 IMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNR 408
Query: 445 G 445
G
Sbjct: 409 G 409
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 113/248 (45%), Gaps = 11/248 (4%)
Query: 135 SFFTDYFGRRKDFKAIHDFLVDNKEVLGP--KTLASCIDRLVRAGRPTQVLGFFERMERD 192
S YF +++ KA F + + P ++ + I+ L + + + F+ M
Sbjct: 314 SLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSK 373
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDE 251
+ + +++ L + G S A LV + N P D I L+ C + ++D+
Sbjct: 374 -SMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDK 432
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L ++ G + Y ++D + K R KD A+ V D+ G +V+
Sbjct: 433 AITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKD-------AQAVYQDLLIKGYHLDVK 485
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+NV+++ LCK ++A+ L +M + GC P+ T+ L+++L++ + + +++ M
Sbjct: 486 MYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545
Query: 372 KSAGYAIG 379
G A+G
Sbjct: 546 IVQGSAVG 553
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S +D L + + + + ++ +D G + + + ++V+ LC+NG A+ + +D
Sbjct: 416 TYSSLLDALCKNHQVDKAITLITKI-KDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQD 474
Query: 225 TANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + D K+ ++++ G C +G DEA L +M G CI D V+
Sbjct: 475 LLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG---------CIPDAVTYETL 525
Query: 284 KKDPFRLD--SEAEKVLLDMEYNG--VPRNVETFNVL 316
+ F D +A K+L +M G V N+ + ++L
Sbjct: 526 VRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSML 562
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 129/270 (47%), Gaps = 12/270 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
ID + G + F+RMERD G + D + +V LC +G S A +L++D +
Sbjct: 181 IDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ +I + +GK EA +L EM R + YN + ++ LC
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL---INGLCMHG--- 293
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+D EA+++L M G +V T+N LI+ CK +R ++ KLF M + G + T+
Sbjct: 294 RVD-EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I+ +QA R E+ RM S + Y L LC R+E+A+ +FE M+
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
D TY++++ C V+ A LF
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T++S I+ + R + +ME + GF+ D +++ C+ G + A +L
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKME-EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ D + + L+ G C G+ +A RL R+M + + ++D K
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK--- 256
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ F SEA K+ +M V +V T+N LI+ LC R ++A ++ M GC P
Sbjct: 257 -EGKF---SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI ++ RV EG ++ M G Y + R + A +F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M + P+ TY +L+ C + RV+KA LF+ ++ +E+ Y +
Sbjct: 373 SRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 9/270 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ L R R L +M + +G++ D ++ ++ C+ A LV
Sbjct: 111 INCLCRCSRFVIALSVVGKMMK-FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PD I + +I G C G +++A L M R G V YN + V+ LC
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL---VAGLCCSGRW- 225
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
S+A +++ DM + NV TF +I K + +A+KL+ M P+ T+
Sbjct: 226 ---SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L RV E +M+D M + G Y + C +R+++ +F +M
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
G D+ TY+ ++ + R D A +F
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 11/186 (5%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ ++ ++N++I+ LC+ R A+ + +M ++G P+ T LI Q R
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + +++ +M+ G+ Y + C I + A+ +F++M+ DG D+ TY+
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 421 LMTKWCAHNR-VDKANALFDEAVRNGV-EVKPKEYRVDPRYLKKPIAVKKGKKRET--LP 476
L+ C R D A + D +R+ V V +D + VK+GK E L
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID-------VFVKEGKFSEAMKLY 267
Query: 477 EKMARK 482
E+M R+
Sbjct: 268 EEMTRR 273
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 47/283 (16%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID V+ G+ ++ + +E M R D + ++ LC +G A++++
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + LI G+C ++DE +L REM + G T+ YN I+ + R
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
A+++ M+ N+ T+++L+ LC R E A+ LF M +
Sbjct: 365 P-------DAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TT+ ++I +C I +E A +F
Sbjct: 415 DITTYNIVIHG-----------------------------------MCKIGNVEDAWDLF 439
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ G PD +Y +++ +C + DK++ L+ + +G+
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 42/211 (19%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+YN +++C+ + R F + A V+ M G +V T + LI+ C+ R DA
Sbjct: 106 SYNIVINCLCRCSR----FVI---ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
I L +M E G P+ + +I + V + E+ DRM+ G Y +
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 390 LCGIER-----------------------------------IEQAMSVFEKMKTDGHNPD 414
LC R +AM ++E+M +PD
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY+ L+ C H RVD+A + D V G
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K+ L+ E + ++ +P V+ F+ ++S + K + + I LF+ M G
Sbjct: 44 KRSSMNLEEEIDLFCKMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHHMEVCGIGH 102
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ ++I L + +R ++ +M GY + C R+ A+ +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
KM+ G PD Y+ ++ C V+ A LFD R+GV Y
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 11/328 (3%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDN 157
SLV L A GF W + + H+ E + D G+ K+F + + +
Sbjct: 178 SLVMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEFDLMWKLVKEM 237
Query: 158 KEVLG---PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY 214
K + G T++ + R +A R + F M + YG ++D +L +++ L +
Sbjct: 238 KRIEGYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMGK-YGVEKDTAALNKLLDALVKGQS 296
Query: 215 ASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
A ++ + + + ++LI GWC ++A+++ E GFE YN
Sbjct: 297 IEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYN-- 354
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ + C KD FR + ++VL +M NG P N T+ +L+ K + A++ +
Sbjct: 355 -NFIESYCHDKD-FR---KVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYE 409
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
RM + G P+ + L+ L +A R+ + E+ D M G Y ++ C
Sbjct: 410 RMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHS 469
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ E A+ + ++M+ PD +TY L+
Sbjct: 470 KEETALRLLKEMEETSCKPDLQTYHPLL 497
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 191 RDYGFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKL 249
+++GF+ D + +E C + + E L + N P+ +L+ G+ G+L
Sbjct: 342 KEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQL 401
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
+A M + G T Y+ ++ + K R KD A +V DM GV R+
Sbjct: 402 SKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKD-------ACEVFDDMPKQGVVRD 454
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V T+N +IS C + E A++L M E C P+ T+ L+K + R+ ++D
Sbjct: 455 VVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLD 514
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
M + Y + L ++ +A + FE+M + G P T LL K
Sbjct: 515 HMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRK 569
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 9/273 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TANEIFPDDK 234
GR L M G DK + ++ C+ G A K+ + T E+ P
Sbjct: 161 GRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAV 220
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ + LI G+C GKLD A + +M + G + YN ++ + R D +
Sbjct: 221 MYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAY------ 274
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
VL +M+ NG+ +V T+N+LI+ CK + A+++F M G T+ LI +
Sbjct: 275 -AVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYA 333
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ +V E D + G Y + C +E+A + +M+ PD
Sbjct: 334 FSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPD 393
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY+ L+ +C R+D+A L DE + G++
Sbjct: 394 DVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQ 426
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++++ C GK A L R+M R V YN + ++ C + R+ + E
Sbjct: 120 NIMLRHLCATGKPVRALELLRQMPRPN----AVTYNTV---IAGFCARG---RVQAALEV 169
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKSL 355
+ E G+ + T+ LIS CKI R EDA K+F M G P+ + LI
Sbjct: 170 MREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGY 229
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ + + M G A+ Y + L R A +V E+M+ +G +PD
Sbjct: 230 CDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDV 289
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY++L+ +C KA +F+E R GV Y
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTY 327
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 12/248 (4%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+ +++ LC G A +L++ P+ + +I G+C G++ A + REM
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR---PNAVTYNTVIAGFCARGRVQAALEVMREMR 174
Query: 261 -RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLIS 318
RGG Y ++ K+ R +D A KV +M G V + +N LI
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMED-------AAKVFDEMLTQGEVAPSAVMYNALIG 227
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + + A++ M + G T+ +L+ +L+ R + +++ M+ G +
Sbjct: 228 GYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSP 287
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C ++A+ VFE+M G + TY L+ + +V + + LF
Sbjct: 288 DVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLF 347
Query: 439 DEAVRNGV 446
AV+ G+
Sbjct: 348 KVAVKKGI 355
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 15/192 (7%)
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR-NVETFNVL 316
++YR L T +N +L LC P R A ++L M PR N T+N +
Sbjct: 106 DIYRLRLPLCTTTFNIML---RHLCATGKPVR----ALELLRQM-----PRPNAVTYNTV 153
Query: 317 ISNLCKIRRSEDAIKLFYRMGE-WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
I+ C R + A+++ M E G P++ T+ LI + R+ + ++ D M + G
Sbjct: 154 IAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQG 213
Query: 376 -YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
A Y + C +++ A+ E M G TY+LL+ R A
Sbjct: 214 EVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDA 273
Query: 435 NALFDEAVRNGV 446
A+ +E RNG+
Sbjct: 274 YAVLEEMQRNGL 285
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 122/300 (40%), Gaps = 46/300 (15%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
GR +D + D ++ EV P + + I G+ L + E M + G
Sbjct: 196 IGRMEDAAKVFDEMLTQGEV-APSAVMYNALIGGYCDRGKLDVALQYREDMVQR-GVAMT 253
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ L+V L +G AS A ++++ N + PD ++LI G+C +G +A +
Sbjct: 254 VATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFE 313
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK--------------------- 296
EM R G V Y ++ S+ + ++ RL A K
Sbjct: 314 EMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGG 373
Query: 297 -------VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
++ +ME +P + T+N LI C + R ++A L M + G P+ L
Sbjct: 374 DMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD----L 429
Query: 350 VLIKSLYQAARVGEGDEMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L K+ G+GD+ + MK G I D +++ + G+ +++ MS + K
Sbjct: 430 GLCKN-------GQGDDAENLMKEMVGKGITPDD-STYISLIEGLTTVDEQMSAADAAKA 481
>gi|357141094|ref|XP_003572081.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Brachypodium distachyon]
Length = 541
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 21/297 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD---YGFKRDKDS-------LRLVVEKLCENGY 214
A I R R GR T L F + R Y D L + V LC+ G+
Sbjct: 106 AFAPLIRRYARLGRATAALRAFHFLRRHPDRYSVVDGGDCSPAATCLLNMTVGALCKEGH 165
Query: 215 ASYAEKLVKDTANE----IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
A KL++ +E PD++ ++L+ GW +L++ ++L EM G V+
Sbjct: 166 PRPAAKLIQRCRHEEGTLPAPDERTYNMLLDGWSSARRLEKVEKLWAEMRLAGVRSTVVS 225
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y + + LC + P +A +L +M G+ N+ T N ++ +L R +DA
Sbjct: 226 YGTL---IKALCMMQHP----DKAASLLDEMREQGIEANLLTCNPIVYSLALAGRFQDAY 278
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
KL + +G PN +TF L+ + + ++ M G K Y F
Sbjct: 279 KLLEKFPLYGVAPNISTFNSLVLGYCKYGDLAGASSVLKAMIGRGILPTAKTYNYFFVFF 338
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+E M+++ KM +G+ PD TY+LL+ C NR++ + E +G E
Sbjct: 339 AKTCNVELGMNLYNKMVNNGYAPDQITYNLLIKMLCEANRLELVVQMIKEMKTSGFE 395
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 172/400 (43%), Gaps = 71/400 (17%)
Query: 71 LLENL---EADPLPISQRLHLIFS----HVTPT---------PSLVQS--TLNFSPEAGR 112
L+ NL E+DP + RL I S H P+ PS V S +L+ P+
Sbjct: 48 LIRNLPEDESDPTSVPHRLFSILSKPNWHKCPSLKSMVPAISPSHVSSLFSLDLDPKTA- 106
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV--------LGPK 164
L F+HW++QN + H+ + + ++ L++N V L K
Sbjct: 107 --LNFSHWISQNPRYKHSVYS-------------YASLLTLLINNGYVGVVFKIRLLMIK 151
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA-SYAEKLVK 223
+ S D L VL +M +D F+ +L++ C N S A +
Sbjct: 152 SCDSVADTLF-------VLDLCRKMNKDESFEL---KYKLIIG--CYNTLLNSLARFGLV 199
Query: 224 DTANEIFPD---DKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
D +++ + DK+C + ++ G+C G ++EA + + G + Y +
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSL 259
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ C++KD LDS A KV +M G RN + LI LC RR ++A+ LF
Sbjct: 260 ---IMGYCQRKD---LDS-AFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFV 312
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+M + C+P T+ VLIK+L + R E ++ M+ G Y + LC
Sbjct: 313 KMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQC 372
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
++E+A + +M G P+ TY+ L+ +C ++ A
Sbjct: 373 KLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 67/340 (19%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV------EKLCENGYAS 216
P T S ID L ++ R + F+ +E+ KD + VV + C+ G +
Sbjct: 497 PWTYTSMIDSLCKSKRVEEACDLFDSLEQ-------KDVIPNVVMYTALIDGYCKAGKVN 549
Query: 217 YAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A ++ K + P+ + LI G C DGKL EA L +M + + TV+ + IL
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQ-PTVSTDTIL 608
Query: 276 DCVSKLCRKKD---PFR-----LDS-----------------------EAEKVLLDMEYN 304
+ +L + D +R L S +AE ++ M+ N
Sbjct: 609 --IHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKEN 666
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL----YQAAR 360
GV ++ T++ LI + R+ A + RM + GC P++ TFL LIK L Y +
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVK 726
Query: 361 VGEGD--------------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
GE E++++M G K Y + + +C I + A VF+ M
Sbjct: 727 GGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHM 786
Query: 407 KT-DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ +G +P ++ L++ C + ++A + D+ + G
Sbjct: 787 QQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVG 826
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 4/202 (1%)
Query: 255 LAREMYRG-GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L R+M + FEL Y I+ C + L F L E ++V ++M + V N+ T+
Sbjct: 165 LCRKMNKDESFEL---KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N +++ CK+ E+A + + E G P+ T+ LI Q + ++ M
Sbjct: 222 NKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPL 281
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G + Y + LC RI++AM +F KMK D P TY +L+ C R +
Sbjct: 282 KGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSE 341
Query: 434 ANALFDEAVRNGVEVKPKEYRV 455
A L E G++ Y V
Sbjct: 342 ALNLVKEMEEKGIKPNIHTYTV 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 127/288 (44%), Gaps = 12/288 (4%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I L + R ++ L + ME + G K + + ++++ LC A +L+
Sbjct: 324 RTYTVLIKALCGSERKSEALNLVKEME-EKGIKPNIHTYTVLIDSLCSQCKLEKARELLG 382
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + P+ + LI G+C G +++A + M T YN + + C
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYN---ELIKGYC 439
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ R +A VL M V +V T+N LI C+ + A +L M + G
Sbjct: 440 K-----RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ +I SL ++ RV E ++ D ++ Y + C ++ +A +
Sbjct: 495 PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLM 554
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
EKM + P+S T++ L+ C ++ +A L ++ V+ ++++P
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVK--IDLQP 600
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 95/249 (38%), Gaps = 30/249 (12%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
++ PD + LI G C G D A RL M G Y ++D + K R ++
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEA 516
Query: 288 FRL-DSEAEK----------VLLD------------------MEYNGVPRNVETFNVLIS 318
L DS +K L+D + N +P ++ TFN LI
Sbjct: 517 CDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL-TFNALIH 575
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC + ++A L +M + P +T +LI L + +M S+G
Sbjct: 576 GLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKP 635
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y F+ C R++ A + KMK +G +PD TY L+ + R + A +
Sbjct: 636 DAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVL 695
Query: 439 DEAVRNGVE 447
G E
Sbjct: 696 KRMHDTGCE 704
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 119/300 (39%), Gaps = 16/300 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
I RL++ G F++M G K D + ++ C G AE +V K N
Sbjct: 609 IHRLLKDGDFDHAYRRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE------------LGTVAYNCILD 276
+ PD LIKG+ G+ + A + + M+ G E L + Y +
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+C + D E +L M +GV N +++ L+ +C+I A K+F M
Sbjct: 728 GEPGVCVMSNMMEFDIVVE-LLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHM 786
Query: 337 GE-WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
+ G P+E F L+ + + E +++D M G+ + + RL
Sbjct: 787 QQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGE 846
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E+ SVF+ + G+ D + +++ V+ LF+ +NG + Y +
Sbjct: 847 KERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSL 906
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 294 AEKVLLDMEY-NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
AEKV M+ G+ + FN L+S CK+ + +A K+ M G P + +LI
Sbjct: 779 AEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILI 838
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
LY+ G + + GY + + + + +E +F M+ +G
Sbjct: 839 CRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCT 898
Query: 413 PDSETYDLLM 422
S+TY LL+
Sbjct: 899 FSSQTYSLLI 908
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 147/356 (41%), Gaps = 50/356 (14%)
Query: 41 LSKPFSSKPTSN--------------------PKTIDDPDQVIARSLSGELLEN------ 74
L KPFSS P + PKT P++ L+++
Sbjct: 18 LLKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKTPLSPEETFVAEKLHSLIKDHYRNNP 77
Query: 75 ---LEADPLPISQRLHLIFSHVTPT-----PSLVQSTLNFSPEAGRAI-----LGFNHWL 121
L DP L L FS T PS+++ + S I L F +W
Sbjct: 78 NKTLPPDPTYTIPSLSLDFSQTISTVHSISPSIIRHVIEQSGGVRHGIPVPQVLAFFNWA 137
Query: 122 TQNANFSHTDETLSFFTDYFGRRKDFK-AIH--DFLVDNKEVLGPKTLASCIDRLVRAGR 178
+ F + E + D+ G+ + F A H D + + +T + + R VRAG
Sbjct: 138 SYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGL 197
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL 238
+ + F RME DY K DK + +++ LC AS A++ ++ PD +
Sbjct: 198 AAEAIHAFNRME-DYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDKFEPDVIVYTN 256
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L++GWC G + EA+R+ EM G + Y+ ++D LCR R A V
Sbjct: 257 LVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVID---SLCRCGQITR----AHDVF 309
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+M G N T+N L+ K R+E ++++ +M GC P+ T+ LI++
Sbjct: 310 AEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIET 365
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 13/216 (6%)
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
Y+ GF+ A+N ++D K+ R+ A V+ M+ V VETF++L+
Sbjct: 139 YQDGFDKSPEAFNEMVDFAGKV-------RMFDLAWHVIDLMKARDVEITVETFSILMRR 191
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+ + +AI F RM ++ C P++ F +LI L + R E E D +K +
Sbjct: 192 YVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDK-FEPD 250
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + C I +A VF +MK G P+ TY +++ C ++ +A+ +F
Sbjct: 251 VIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFA 310
Query: 440 EAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
E + G + Y R I VK G+ + L
Sbjct: 311 EMLDAGCQPNSITYNSLMR-----IHVKAGRTEKVL 341
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 7/222 (3%)
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
AN I P+ I ++ + G +D+A + +M + G V+Y ++D + KL R
Sbjct: 22 VANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRV 81
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D AE M GV N+ F+ L+ LC I + E +LF+ M G HPN
Sbjct: 82 DD-------AEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPN 134
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
F ++ +L + RV EG ++D ++ G Y + C I++A + E
Sbjct: 135 IVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE 194
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M + G P+S +Y+ L+ +C R+D A +LF + + NG+
Sbjct: 195 GMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGI 236
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 133/347 (38%), Gaps = 33/347 (9%)
Query: 141 FGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
+G + +HD L V N + G + + F +M R +G
Sbjct: 5 YGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQHGLSP 63
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D S +++ LC+ G AE NE + P+ + L+ G C K ++ + L
Sbjct: 64 DAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELF 123
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-DS----------------------- 292
EM G V +N IL + K R + RL DS
Sbjct: 124 FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLA 183
Query: 293 ----EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA K+L M G+ N ++N L+ CK R + A LF +M G P T+
Sbjct: 184 GTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTY 243
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ L+Q R E E+ M ++G G Y L LC +++A +F+ + +
Sbjct: 244 NTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCS 303
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G + T+ +++ R + A LF NG+ YRV
Sbjct: 304 KGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRV 350
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 133/304 (43%), Gaps = 15/304 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G + D S +++ C G A KL++ + + P+ + L+ G+C G++D A
Sbjct: 165 GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSA 224
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L R+M G G V YN IL + + R SEA+++ L+M +G + T
Sbjct: 225 YSLFRKMLSNGITPGVVTYNTILHGLFQTKRF-------SEAKELYLNMINSGTKWGIYT 277
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +++ LCK ++A K+F + G N TF ++I +L + R + ++ +
Sbjct: 278 YNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 337
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G Y L +E+ S+F M+ +G P+S+ + L+ + +
Sbjct: 338 ANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 397
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLS 492
+A A ++ + + V+ I++ + + + + +K R L + S
Sbjct: 398 RAGAYLS-------KLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSS 450
Query: 493 FVKK 496
+ K
Sbjct: 451 ALIK 454
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 10/262 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGW 243
FFE + + G + ++ LC+ G ++LV + PD + LI G
Sbjct: 123 FFEML--NVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C+ G +DEA +L M G + + +YN +L K R+DS A + M
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCK------AGRIDS-AYSLFRKMLS 233
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
NG+ V T+N ++ L + +R +A +L+ M G T+ ++ L ++ V E
Sbjct: 234 NGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDE 293
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+M + S G + + + L R E AM +F + +G PD TY ++
Sbjct: 294 AFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAE 353
Query: 424 KWCAHNRVDKANALFDEAVRNG 445
+++ ++LF +NG
Sbjct: 354 NLIEEGSLEEFDSLFSAMEKNG 375
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 25/307 (8%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD+ E +G P ++ + ID AG + E M G K + S ++
Sbjct: 157 LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGM-VSVGLKPNSFSYNTLLHGY 215
Query: 210 CENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ G A L K +N I P + ++ G + EAK L M G + G
Sbjct: 216 CKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGI 275
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
YN IL+ LC+ EA K+ + G+ N+ TF ++I L K R ED
Sbjct: 276 YTYNTILN---GLCKSN----CVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKED 328
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+ LF + G P+ T+ V+ ++L + + E D + M+ G A + +
Sbjct: 329 AMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVR 388
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
RL I +A + K+ + ++ T +L++ + + A +L
Sbjct: 389 RLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL----------- 437
Query: 449 KPKEYRV 455
PK+YR+
Sbjct: 438 -PKKYRI 443
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 36/311 (11%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-- 230
L R GR + L M R +G D + V+ LC+ G + A L+ NE+
Sbjct: 185 LCRLGRADEALALLRGMAR-HGCVPDAVLYQTVIHALCDQGGVTEAATLL----NEMLLM 239
Query: 231 ---PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
D D +++G C G++ EA RL M G G + Y +L + ++ R+ D
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRV-RQADE 298
Query: 288 FRLD-------------------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
R +EA ++ M G + T+++L+ LCK
Sbjct: 299 ARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCK 358
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ R A++L M + G PN T+ +++ S + + +++ M + G + +
Sbjct: 359 LGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 418
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC R+++AM + ++M++ G NPD +Y+ ++ C + ++++A +F+ +
Sbjct: 419 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 478
Query: 443 RNGVEVKPKEY 453
GV Y
Sbjct: 479 EEGVVANGITY 489
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 44/306 (14%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFP 231
L + GR + ME+ GF + + +V+ C+NG L+++ +A +
Sbjct: 356 LCKLGRIGSAVRLLREMEKK-GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 414
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGG---------------------------- 263
+ + + +I C DG++DEA L +EM G
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 474
Query: 264 ---FELGTVA----YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
E G VA YN I+ + + R +D RL E M +G +V ++N L
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE-------MILHGCSLDVVSYNGL 527
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I +CK + ++ L M E G PN ++ +LI L + RV + E+ +M + G
Sbjct: 528 IKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGL 587
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
A Y + LC + + A+++ EK+ + +PD TY++L++ C +D A
Sbjct: 588 APDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAM 647
Query: 437 LFDEAV 442
L + A+
Sbjct: 648 LLNRAM 653
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 122/254 (48%), Gaps = 8/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G + D + +++ LC+ G A +L+++ + F P+ +++ +C +G D+
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 400
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L EM G L + YN + + LC+ R+D EA ++ +M G ++ +
Sbjct: 401 RALLEEMSAKGLTLNSQGYNGM---IYALCKDG---RMD-EAMGLIQEMRSQGCNPDICS 453
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +I +LC + E+A +F + E G N T+ +I +L + R + + M
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G ++ Y + +C +++++ + E+M G P++ +Y++L+++ C RV
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 573
Query: 433 KANALFDEAVRNGV 446
A L + + G+
Sbjct: 574 DALELSKQMLNQGL 587
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +L+ G C G++ A RL REM + GF V Y +L C+ +
Sbjct: 344 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLH---SFCKNG----M 396
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ +L +M G+ N + +N +I LCK R ++A+ L M GC+P+ ++
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L ++ E + M + + G Y + L R + A+ + ++M G
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ D +Y+ L+ C VD++ L +E G++ Y +
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 561
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 113/282 (40%), Gaps = 12/282 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFP 231
L RA L + RM + + LC G A A L++ A + P
Sbjct: 149 LARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVP 208
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + +I C G + EA L EM G ++ ++ + L R +
Sbjct: 209 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVR------ 262
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA +++ M G V T+ L+ LC++R++++A + R+ E N F +
Sbjct: 263 -EAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTV 317
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I ++ E E+ + M G Y + LC + RI A+ + +M+ G
Sbjct: 318 IGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGF 377
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ TY +++ +C + D AL +E G+ + + Y
Sbjct: 378 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLL---DMEYNGVPRNVETFNVLISNLCKIRRS 326
+YN +L ++ R D A+ + L + + VP TF V LC++ R+
Sbjct: 141 SYNVVLSVLA---------RADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRA 191
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++A+ L M GC P+ + +I +L V E +++ M G A + +
Sbjct: 192 DEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ +CG+ R+ +A + ++M T G P TY L+ C + D+A A+
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 38/279 (13%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G D +A+ + + L + I L + GR + +G + M R G D S
Sbjct: 395 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICS 453
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ LC N AE + ++ E + I + +I DG+ +A RLA+EM
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513
Query: 261 RGGFELGTVAYNCILDC--------------------------------VSKLCRKKDPF 288
G L V+YN ++ +S+LC+++
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR-V 572
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R E K +L+ G+ ++ T+N LI+ LCK+ A+ L ++ HP+ T+
Sbjct: 573 RDALELSKQMLN---QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITY 629
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+LI + + + +++R +A +G + + L
Sbjct: 630 NILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQIL 668
>gi|296084709|emb|CBI25851.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 148/347 (42%), Gaps = 19/347 (5%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDN 157
SL QS L L F W + + H+ S + F ++ +AI D +
Sbjct: 72 SLTQSQLG---------LRFFIWAGVQSYYRHSSYLYSKACELFRINQNPRAIIDVIEAY 122
Query: 158 K---EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY 214
+ V+ KT + L A + L ++M ++ + D + V+ CE G
Sbjct: 123 RVEGTVVSVKTFNVVLHLLREAKLADEALWILKKMA-EFNIRADTVAYNSVIRLFCEKGD 181
Query: 215 ASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
A L+K+ +++P+ +IKG+C G+L++A +L + M G V Y
Sbjct: 182 MDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGRLEDACKLFKVMKGHGCSPNVVVYTV 241
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
ILD V + + L E EK E NV T+ +I + C+ + +A+++
Sbjct: 242 ILDGVCRFGSLERALELLGEMEK-----ESGDCSPNVVTYTSMIQSCCEKGKLMEALEIL 296
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
RM GC PN T +L+K RV E ++ID++ + G + Y + L G
Sbjct: 297 DRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVAGGNVSYGECYSSLIVSLVGN 356
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ +++A +F +M + PD L+ C RV LFDE
Sbjct: 357 KNLQEAEKLFRRMLANAVKPDGLACGTLIKALCLEGRVLDGFHLFDE 403
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 279 SKLCRKKDPFRLDSEAEKVLLDME---YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
SK C + FR++ ++ +E G +V+TFNV++ L + + +++A+ + +
Sbjct: 100 SKAC---ELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKK 156
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E+ + + +I+ + + ++ M Y + C + R
Sbjct: 157 MAEFNIRADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGR 216
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+E A +F+ MK G +P+ Y +++ C +++A L E + + P
Sbjct: 217 LEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSP 271
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 129/284 (45%), Gaps = 6/284 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L G+ + L F++M + GF+ D + ++ LC++ + A L D
Sbjct: 82 TFTTLIRGLCVEGKIGEALQLFDKMTGE-GFQPDVLTYGTLINGLCKDRQLTEALSLFSD 140
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A I P++ LI G C+ G EA RL M + +N ++D LC
Sbjct: 141 MLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD---ALC- 196
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K+ ++ +A + +M G+ + T+N LI LC + R DAI LF+ M +G P
Sbjct: 197 KEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP 256
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +L L + R+ E ++ ++ Y + +C +E A +F
Sbjct: 257 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF 316
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
K+ + G +PD TY +++ C + +A+ LF E N +E
Sbjct: 317 SKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIE 360
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 41/294 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ + R + VL +++M+ +G + +L +++ C +A ++ D
Sbjct: 17 LTSITRMKHYSTVLSLYKQMD-SFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLG 75
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P LI+G CV+GK+ EA +L +M GF+ + Y + ++ LC+ +
Sbjct: 76 YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTL---INGLCKDRQL- 131
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+EA + DM G+ N T++ LI LC + ++AI+LFY M P++ TF
Sbjct: 132 ---TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 188
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ +L + I+ +++AM +FE+M
Sbjct: 189 NTLVDALCKEGM--------------------------------IQIMDKAMGLFEEMSQ 216
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
G PD+ TY+ L+ C R+ A ALF E V G YR+ YL K
Sbjct: 217 QGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCK 270
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 68/141 (48%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P ++ F+ L++++ +++ + L+ +M +G N T +LI S R+G
Sbjct: 7 PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFS 66
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ + GY + + LC +I +A+ +F+KM +G PD TY L+ C
Sbjct: 67 VLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLC 126
Query: 427 AHNRVDKANALFDEAVRNGVE 447
++ +A +LF + + G+
Sbjct: 127 KDRQLTEALSLFSDMLAKGIS 147
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 36/311 (11%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-- 230
L R GR + L M R +G D + V+ LC+ G + A L+ NE+
Sbjct: 169 LCRLGRADEALALLRGMAR-HGCVPDAVLYQTVIHALCDQGGVTEAATLL----NEMLLM 223
Query: 231 ---PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
D D +++G C G++ EA RL M G G + Y +L + ++ R+ D
Sbjct: 224 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRV-RQADE 282
Query: 288 FRLD-------------------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
R +EA ++ M G + T+++L+ LCK
Sbjct: 283 ARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCK 342
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ R A++L M + G PN T+ +++ S + + +++ M + G + +
Sbjct: 343 LGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 402
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC R+++AM + ++M++ G NPD +Y+ ++ C + ++++A +F+ +
Sbjct: 403 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 462
Query: 443 RNGVEVKPKEY 453
GV Y
Sbjct: 463 EEGVVANGITY 473
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 44/306 (14%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFP 231
L + GR + ME+ GF + + +V+ C+NG L+++ +A +
Sbjct: 340 LCKLGRIGSAVRLLREMEKK-GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 398
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGG---------------------------- 263
+ + + +I C DG++DEA L +EM G
Sbjct: 399 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 458
Query: 264 ---FELGTVA----YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
E G VA YN I+ + + R +D RL E M +G +V ++N L
Sbjct: 459 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE-------MILHGCSLDVVSYNGL 511
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I +CK + ++ L M E G PN ++ +LI L + RV + E+ +M + G
Sbjct: 512 IKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGL 571
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
A Y + LC + + A+++ EK+ + +PD TY++L++ C +D A
Sbjct: 572 APDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAM 631
Query: 437 LFDEAV 442
L + A+
Sbjct: 632 LLNRAM 637
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 122/254 (48%), Gaps = 8/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G + D + +++ LC+ G A +L+++ + F P+ +++ +C +G D+
Sbjct: 325 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 384
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L EM G L + YN + + LC+ R+D EA ++ +M G ++ +
Sbjct: 385 RALLEEMSAKGLTLNSQGYNGM---IYALCKDG---RMD-EAMGLIQEMRSQGCNPDICS 437
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +I +LC + E+A +F + E G N T+ +I +L + R + + M
Sbjct: 438 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 497
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G ++ Y + +C +++++ + E+M G P++ +Y++L+++ C RV
Sbjct: 498 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 557
Query: 433 KANALFDEAVRNGV 446
A L + + G+
Sbjct: 558 DALELSKQMLNQGL 571
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +L+ G C G++ A RL REM + GF V Y +L C+ +
Sbjct: 328 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLH---SFCKNG----M 380
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ +L +M G+ N + +N +I LCK R ++A+ L M GC+P+ ++
Sbjct: 381 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 440
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L ++ E + M + + G Y + L R + A+ + ++M G
Sbjct: 441 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 500
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ D +Y+ L+ C VD++ L +E G++ Y +
Sbjct: 501 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 545
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
VP TF V LC++ R+++A+ L M GC P+ + +I +L V E
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+++ M G A + + + +CG+ R+ +A + ++M T G P TY L+
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274
Query: 426 CAHNRVDKANALF 438
C + D+A A+
Sbjct: 275 CRVRQADEARAML 287
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 38/279 (13%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G D +A+ + + L + I L + GR + +G + M R G D S
Sbjct: 379 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICS 437
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ LC N AE + ++ E + I + +I DG+ +A RLA+EM
Sbjct: 438 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 497
Query: 261 RGGFELGTVAYNCILDC--------------------------------VSKLCRKKDPF 288
G L V+YN ++ +S+LC+++
Sbjct: 498 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR-V 556
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R E K +L+ G+ ++ T+N LI+ LCK+ A+ L ++ HP+ T+
Sbjct: 557 RDALELSKQMLN---QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITY 613
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+LI + + + +++R +A +G + + L
Sbjct: 614 NILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQIL 652
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 136/325 (41%), Gaps = 36/325 (11%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
HD +V +L T + I+ L + G + +ME + + ++V+ LC
Sbjct: 171 HDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQV-VRPNVVIYNMIVDGLC 229
Query: 211 ENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
++G + A L D I PD LI G+C G+ E RL +M L
Sbjct: 230 KDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVY 289
Query: 270 AYNCILDCVSKLCRKK-------------------DPFRLDS------------EAEKVL 298
YN ++D LC+K D ++ EA K+
Sbjct: 290 TYNILID---ALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
G+ +V ++N+LI CK R ++A+ LF +M PN T+ LI L ++
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKS 406
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E+ + G + Y L LC I+ +++A+ +F M G P+ +Y
Sbjct: 407 GRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSY 466
Query: 419 DLLMTKWCAHNRVDKANALFDEAVR 443
++L+ +C R+D+A LF+E R
Sbjct: 467 NILINGYCKSKRIDEAMNLFEEMHR 491
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 16/260 (6%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIF-----PDDKICDLLIKGWCVDGKLDEAKRL 255
+ ++++ LC+ G A D N + PD + L+ G+C+ + EA++L
Sbjct: 290 TYNILIDALCKKGMLGKAH----DMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKL 345
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
G +YN + + C+ R+D EA + M Y + N+ T++
Sbjct: 346 FDTFAECGITPDVWSYNIL---IIGYCKNN---RID-EALSLFNKMNYKKLAPNIVTYSS 398
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI LCK R A +LF + + G PN T+ +++ +L + V + E+ + M G
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + C +RI++AM++FE+M PDS TY+ L+ C R+ A
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
LF+ G V Y +
Sbjct: 519 ELFNVMHDGGPPVDVITYNI 538
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 12/283 (4%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
++ L +C L G VLG M G++ + +L +++ LC NG A
Sbjct: 112 SIVTLSILINCYCHLGHMGFAFSVLG----MVLKRGYQLNAITLTTIMKGLCINGEVRKA 167
Query: 219 EKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+ + F D++ LI G C G EA L +M V YN I+D
Sbjct: 168 LEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVD- 226
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LC+ L +EA + D+ G+ +V T+ LI C + + + +L M
Sbjct: 227 --GLCKDG----LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMV 280
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ + N T+ +LI +L + +G+ +M + M G + ++ C +
Sbjct: 281 DRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVV 340
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+A +F+ G PD +Y++L+ +C +NR+D+A +LF++
Sbjct: 341 EARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNK 383
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 8/256 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREM 259
+L +++ C G+ +A ++ + + I ++KG C++G++ +A +
Sbjct: 115 TLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSV 174
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
GF L V Y +++ + K+ L EA ++L ME V NV +N+++
Sbjct: 175 VAQGFLLDEVTYGTLINGLCKI-------GLTREAFELLHKMEGQVVRPNVVIYNMIVDG 227
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LCK +A L+ + G P+ T+ LI + E ++ M +
Sbjct: 228 LCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLN 287
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + LC + +A + M G PD T++ LM+ +C +N V +A LFD
Sbjct: 288 VYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFD 347
Query: 440 EAVRNGVEVKPKEYRV 455
G+ Y +
Sbjct: 348 TFAECGITPDVWSYNI 363
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V +N IL + K+ L + M G+ ++ T ++LI+ C +
Sbjct: 78 VVEFNMILGSIVKMKHYPTAISLSKQ-------MGLRGITPSIVTLSILINCYCHLGHMG 130
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A + + + G N T ++K L V + E D + + G+ + + Y +
Sbjct: 131 FAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLI 190
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
LC I +A + KM+ P+ Y++++ C V +A L+ + V G++
Sbjct: 191 NGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGID 250
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 205 VVEKLCENGYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC++G SYA +L + D P+ ++++ C +D+A L M+
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPS--PNVITYNIMLDALCKIQLVDKAIELFNLMFE 456
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY-NGVPRNVETFNVLISNL 320
G +YN + ++ C+ K R+D EA + +M N VP +V T+N LI L
Sbjct: 457 RGLTPNVSSYNIL---INGYCKSK---RID-EAMNLFEEMHRRNLVPDSV-TYNCLIDGL 508
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
CK R A +LF M + G + T+ +L + + V
Sbjct: 509 CKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 147 FKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDS 201
F AIHD GP T +D L + + + F M ER G + S
Sbjct: 416 FSAIHDG--------GPSPNVITYNIMLDALCKIQLVDKAIELFNLMFER--GLTPNVSS 465
Query: 202 LRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ C++ A L ++ + PD + LI G C G++ A L M+
Sbjct: 466 YNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMH 525
Query: 261 RGGFELGTVAYNCILDCVSKL 281
GG + + YN + D SK+
Sbjct: 526 DGGPPVDVITYNILFDAFSKI 546
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 36/311 (11%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-- 230
L R GR + L M R +G D + V+ LC+ G + A L+ NE+
Sbjct: 185 LCRLGRANEALALLRGMAR-HGCVPDAVLYQTVIHALCDQGGVTEAATLL----NEMLLM 239
Query: 231 ---PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
D D +++G C G++ EA RL M G G + Y +L + ++ R+ D
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRV-RQADE 298
Query: 288 FRLD-------------------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
R +EA ++ M G + T+++L+ LCK
Sbjct: 299 ARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCK 358
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ R A++L M + G PN T+ +++ S + + +++ M + G + +
Sbjct: 359 LGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 418
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC R+++AM + ++M++ G NPD +Y+ ++ C + ++++A +F+ +
Sbjct: 419 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 478
Query: 443 RNGVEVKPKEY 453
GV Y
Sbjct: 479 EEGVVANGITY 489
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 132/306 (43%), Gaps = 44/306 (14%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFP 231
L + GR + + ME+ GF + + +V+ C+NG L+++ +A +
Sbjct: 356 LCKLGRISSAVRLLREMEKK-GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 414
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGG---------------------------- 263
+ + + +I C DG++DEA L +EM G
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 474
Query: 264 ---FELGTVA----YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
E G VA YN I+ + + R +D RL E M +G +V ++N L
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE-------MILHGCSLDVVSYNGL 527
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I +CK + ++ L M E G PN ++ +LI L + RV + E+ +M + G
Sbjct: 528 IKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGL 587
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
A Y + LC + + A+++ EK+ + +PD TY++L++ C +D A
Sbjct: 588 APDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAM 647
Query: 437 LFDEAV 442
L + A+
Sbjct: 648 LLNRAM 653
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 129/271 (47%), Gaps = 9/271 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKI 235
G+ + +E M G + D + +++ LC+ G S A +L+++ + F P+
Sbjct: 325 GKLAEATELYETMGLK-GCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVT 383
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+++ +C +G D+ + L EM G L + YN + + LC+ R+D EA
Sbjct: 384 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM---IYALCKDG---RMD-EAM 436
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++ +M G ++ ++N +I +LC + E+A +F + E G N T+ +I +L
Sbjct: 437 GLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 496
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ R + + M G ++ Y + +C +++++ + E+M G P++
Sbjct: 497 LRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNN 556
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+Y++L+++ C RV A L + + G+
Sbjct: 557 VSYNILISELCKERRVRDALELSKQMLNQGL 587
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +L+ G C G++ A RL REM + GF V Y +L C+ +
Sbjct: 344 PDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVL---HSFCKNG----M 396
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ +L +M G+ N + +N +I LCK R ++A+ L M GC+P+ ++
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L ++ E + M + + G Y + L R + A+ + ++M G
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ D +Y+ L+ C VD++ L +E G++ Y +
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 561
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 12/282 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFP 231
L RA L + RM + + LC G A+ A L++ A + P
Sbjct: 149 LARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVP 208
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + +I C G + EA L EM G ++ ++ + L R +
Sbjct: 209 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVR------ 262
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA +++ M G V T+ L+ LC++R++++A + R+ E N F +
Sbjct: 263 -EAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTV 317
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I ++ E E+ + M G Y + LC + RI A+ + +M+ G
Sbjct: 318 IGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGF 377
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ TY +++ +C + D AL +E G+ + + Y
Sbjct: 378 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G D +A+ + + L + I L + GR + +G + M R G D S
Sbjct: 395 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICS 453
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC N AE + ++ E + + + +I DG+ +A RLA+EM
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFR----LDSEAEKVLL--DMEYN---------- 304
G L V+YN + + +C+ + R L+ AEK + ++ YN
Sbjct: 514 LHGCSLDVVSYNGL---IKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKER 570
Query: 305 ---------------GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
G+ ++ T+N LI+ LCK+ A+ L ++ HP+ T+
Sbjct: 571 RVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYN 630
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+LI + + + +++R +A +G + + L
Sbjct: 631 ILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQIL 668
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 158/387 (40%), Gaps = 34/387 (8%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S V + +V+ L AG F W + +++H+ + D + + ++ +
Sbjct: 16 SGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLM 75
Query: 151 HDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
D + + +K ++ +T + + RA + + + F M++ Y + + ++
Sbjct: 76 WDVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIMDK-YDVPPNLAAFNGLLSA 134
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
LC++ A+++ + PD K +L++GW D L +A+ + REM G
Sbjct: 135 LCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDI 194
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSE----------------------------AEKVLLD 300
V Y ++D + K R + + +E A L+
Sbjct: 195 VTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLE 254
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME NG+ +V +N LI CK R ++ ++ M G PN TF +++ SL
Sbjct: 255 MENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGE 314
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSETYD 419
E + RM D Y + ++ C + +++A+ V++ MK P T+
Sbjct: 315 TDEAYRVFLRMIKVCEP--DADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQ 372
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
+L+ C V +A L +E + G+
Sbjct: 373 VLINGLCEKGDVTQACVLLEEMIEKGI 399
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 14/274 (5%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWC 244
FFE E+ + + V++ L + +VK ++ + + ++++ +
Sbjct: 42 FFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRMVNVETFCIIMRKYA 101
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
K++EA M + A+N +L S LC+ K+ +A+++ ++
Sbjct: 102 RAQKVEEAVYTFNIMDKYDVPPNLAAFNGLL---SALCKSKNV----RKAQEIFDSIKDR 154
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
VP + +T+++L+ K A ++F M GC P+ T+ +++ L +A RV E
Sbjct: 155 FVP-DSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEA 213
Query: 365 DEMIDRMKSAGYAIGKKD--YYEFLTRLCGIE-RIEQAMSVFEKMKTDGHNPDSETYDLL 421
+++ M S + K Y L GIE RIE A+S F +M+ +G PD Y+ L
Sbjct: 214 LGIVNEMDST---VCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNAL 270
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ +C NR+ + +E GV + + +
Sbjct: 271 IGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNI 304
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 82/223 (36%), Gaps = 27/223 (12%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +D L +AGR + LG M+ LV EN ++
Sbjct: 196 TYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEM 255
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
N I PD + + LI +C +L R+ EM G + +N IL +
Sbjct: 256 ENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGET 315
Query: 285 KDPFRL----------DSEAEKVLLDM--------------EYNGVPR---NVETFNVLI 317
+ +R+ D++ +++ M +Y + R ++ TF VLI
Sbjct: 316 DEAYRVFLRMIKVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLI 375
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+ LC+ A L M E G P+ TF L + L + R
Sbjct: 376 NGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGR 418
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 130/320 (40%), Gaps = 13/320 (4%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + R+K FK+I L DN L + I+ +G+ + + F++M
Sbjct: 59 TYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKM 118
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDG 247
++YG K + +++ G + KL++ + + P+D+ ++LI+ WC
Sbjct: 119 -KEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKK 177
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
KL+EA + +M G + V YN + R AE+++L M YN V
Sbjct: 178 KLEEAWNVLHKMVASGIQPDVVTYNT-------MARAYAQNGETERAERLILKMPYNIVK 230
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N T ++IS CK +A++ YRM E G PN F LIK DE
Sbjct: 231 PNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEA 290
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M+ G + + +E +F M G PD Y +L +
Sbjct: 291 LTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVR 350
Query: 428 HNRVDKANALFDEAVRNGVE 447
+ KA AL + GV+
Sbjct: 351 AGQPRKAEALLTSMSKYGVQ 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 142/355 (40%), Gaps = 60/355 (16%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVKDTANE 228
++ L+ G+P + F + + G K + +V L + + S L K N
Sbjct: 29 MNTLIGKGKPHEAQAVFNNLTEE-GHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 87
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + + +I + GK+DEA ++ ++M G + T YN ++ R +
Sbjct: 88 MKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESM 147
Query: 289 RLDSEAEKVLLDMEYNGVPRNVE----TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+L +E G NV+ T+N+LI C ++ E+A + ++M G P+
Sbjct: 148 KL----------LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPD 197
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRM---------KSAGYAIGK-------KDYYEFLT 388
T+ + ++ Q + +I +M ++ G I + FL
Sbjct: 198 VVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLY 257
Query: 389 RL--CGIE--------------------RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
R+ G++ +++A+++ E+ G PD T+ +M W
Sbjct: 258 RMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEF---GIKPDVVTFSTIMNAWS 314
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
+ ++ +F++ V+ G+E Y + K + + +K E L M++
Sbjct: 315 SAGLMENCEEIFNDMVKAGIEPDIHAYSI---LAKGYVRAGQPRKAEALLTSMSK 366
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 196/454 (43%), Gaps = 54/454 (11%)
Query: 34 PTHYLNFLSKPFSSKPTSNPKTIDDPDQVIA--RSLSGELLENLEADPLPISQRLHLIFS 91
TH+L+ L+ P P ++ D +I R S E +E + D I L+F
Sbjct: 51 ATHFLHSLAAP-DKFPNGFNQSAVDVHNIIKHHRGSSPEEIERI-LDKCGIQLTEELVFE 108
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIH 151
V S ++ P + L H + +++ + + D G+ + F+ H
Sbjct: 109 VVNRNRS------DWKPAYILSRLIVKHSVYISSSLVYNE-----ILDVLGKMRRFEEFH 157
Query: 152 ---DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
D + + KT ++R A + + +G FER R++G + D + ++
Sbjct: 158 QVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVGVFER-RREFGIEDDLVAFHGLLMW 216
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
LC + +AE L E D + ++++ GWCV G + EAKR+ +++ +
Sbjct: 217 LCRYKHVEFAETLFCSRRREFGCDIRTMNIILNGWCVLGNVHEAKRIWKDIIASKCKPDV 276
Query: 269 VAYNCILDCVS---KLCRKKDPFR-----------------LDS--------EAEKVLLD 300
V+Y +++ ++ KL + + +R +D+ EA +V +
Sbjct: 277 VSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICNNVIDALCFKKRIPEALEVFKE 336
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG--CHPNETTFLVLIKSLYQA 358
M G NV T+N L+ +LCKIRR+E +L M G C PN+ TF L+K +
Sbjct: 337 MSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGGSCSPNDVTFGYLLK---YS 393
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSET 417
R + D +++RM + D Y + RL + E+ ++ +M+ G PD T
Sbjct: 394 QRSKDVDAVLERMAKNKCEM-TSDLYNLMFRLYVQWDNEEKVREIWGEMERSGLGPDQRT 452
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
Y + + ++ +A + F E + G+ +P+
Sbjct: 453 YTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPR 486
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 12/254 (4%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
F D+K ++L+ + K+DEA + G E VA++ +L LCR K
Sbjct: 169 FVDEKTYEVLLNRYAAAHKVDEAVGVFERRREFGIEDDLVAFHGLL---MWLCRYKH--- 222
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
E + L ++ T N++++ C + +A +++ + C P+ ++
Sbjct: 223 --VEFAETLFCSRRREFGCDIRTMNIILNGWCVLGNVHEAKRIWKDIIASKCKPDVVSYG 280
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+I +L + ++G+ E+ + G K + LC +RI +A+ VF++M
Sbjct: 281 TMINALTKKGKLGKAMELYRALWETGRNPDVKICNNVIDALCFKKRIPEALEVFKEMSEK 340
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
G +P+ TY+ L+ C R +K L +E G P + V YL K ++
Sbjct: 341 GPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGGSCSPND--VTFGYLLK--YSQRS 396
Query: 470 KKRETLPEKMARKR 483
K + + E+MA+ +
Sbjct: 397 KDVDAVLERMAKNK 410
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 155/356 (43%), Gaps = 13/356 (3%)
Query: 95 PTPSLVQSTLNFSPEAGRAILGFNHWLTQ--NANFSHTDETLSFFTDYFGRRKDFKAIHD 152
T +L+ ST + RA F W+ N N + ++ ++ F+ + +
Sbjct: 264 ATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEE 323
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+V T + ID L + G + F ++ R +K + + ++ C+
Sbjct: 324 -MVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKE 382
Query: 213 GYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
+ AE L ++ + P+ LI G C G A L M + GF Y
Sbjct: 383 EKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTY 442
Query: 272 NCILDCVSKLCRK-KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
N I+D LC+K + P EA K+L +G+ + T+ +LIS C+ ++ A+
Sbjct: 443 NAIID---GLCKKGRFP-----EAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQAL 494
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+F RM + G P+ T+ VLI + + +V E +++ + G K+ Y +
Sbjct: 495 AIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGY 554
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
C I A+ F KM+ G PDS TY L++ C +++D+A L++ + NG+
Sbjct: 555 CRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGL 610
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 16/286 (5%)
Query: 175 RAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYAS----YAEKLVKDTANEI 229
R GR + V + + M ER G+ D + L++ E G+ + Y +K V+ N
Sbjct: 240 RMGRISDVDRWLKDMIER--GYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLN-- 295
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P+ LI G C G + +A + EM R G++ + ++D + K + FR
Sbjct: 296 -PNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFR 354
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
L L + + NV T+ +I+ CK + A L RM E G PN T+
Sbjct: 355 L------FLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYT 408
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI +A G E++D M G+ Y + LC R +A + +
Sbjct: 409 CLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKS 468
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G + D TY +L++++C +A A+F + G++ Y V
Sbjct: 469 GLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNV 514
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 113/297 (38%), Gaps = 22/297 (7%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
N L + + + + L + L FF + GF + + +RL + +C + +
Sbjct: 96 NPNSLTHEQVITVVASLAQEAGSVVSLSFFNWV---IGFSKFRHFMRLYI--VCATTFLN 150
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
D A E+ +++ + GKL EA + EM G L N ++D
Sbjct: 151 NDNL---DRATEVM------QCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVID 201
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
L AEKV +M V + ++ +++ C++ R D + M
Sbjct: 202 VALAL-------GFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDM 254
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
E G + T ++I + + V + G ++ + LC I I
Sbjct: 255 IERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSI 314
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+QA + E+M G P+ T+ L+ C +KA LF + VR+ KP Y
Sbjct: 315 KQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD-NYKPNVY 370
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 12/244 (4%)
Query: 205 VVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ C G YA L + ++ I P+ +LI G+C +GK+ EAK + M +
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN 298
Query: 264 FELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
+L V YN ++D C+ K K A+ + M GV +V +++++I+ C
Sbjct: 299 VKLDVVTYNSLMDGYCLVKQVNK---------AKSLFNVMAQRGVTPDVWSYSIMINGFC 349
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
KI+ ++A+KLF M PN T+ L+ L ++ R E++D M G
Sbjct: 350 KIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNII 409
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y L +C +++A+ + K+K G PD TY +L+ C R+D A +F++
Sbjct: 410 TYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDL 469
Query: 442 VRNG 445
+ G
Sbjct: 470 LVKG 473
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + G+ + M + K D + +++ C + A+ L
Sbjct: 270 TFSILIDGFCKEGKVREAKNVLAVMMKK-NVKLDVVTYNSLMDGYCLVKQVNKAKSLFNV 328
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + PD ++I G+C +DEA +L EM+ V YN ++D + K R
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
L E M G P N+ T+N ++ +CK + AI L ++ E G P
Sbjct: 389 TSCALELVDE-------MHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQP 441
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ VLI L + R+ + ++ + + GY+ Y + C ++ +++
Sbjct: 442 DIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAML 501
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
KMK +G P++ TY++L+ + DKA L E + G+
Sbjct: 502 SKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 132/300 (44%), Gaps = 30/300 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ L++A + L ++ME + G K D + L++ + G+ ++ + +
Sbjct: 65 LGSLLKAKQYQTALSLSQQMEFN-GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LIKG C+ G++ +A ++ GF+L V+Y +++ + ++ K
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183
Query: 289 RL--------------------DS--------EAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L DS +A + +M + +V T++ LIS
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C + + + A+ LF RM +PN TF +LI + +V E ++ M +
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++++ +A S+F M G PD +Y +++ +C VD+A LF+E
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 124/306 (40%), Gaps = 9/306 (2%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
HD +V L + + I+ L R G + R++ + + +++ +C
Sbjct: 151 HDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKL-VRPNVVMYSTIIDSMC 209
Query: 211 ENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
++ + A L + ++ I PD LI G+CV GKL A L M
Sbjct: 210 KDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVY 269
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
++ ++D C++ EA+ VL M V +V T+N L+ C +++ A
Sbjct: 270 TFSILID---GFCKEGKV----REAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKA 322
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
LF M + G P+ ++ ++I + V E ++ + M Y +
Sbjct: 323 KSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDG 382
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
LC R A+ + ++M G + TY+ ++ C +N VDKA L + G++
Sbjct: 383 LCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPD 442
Query: 450 PKEYRV 455
Y V
Sbjct: 443 IFTYTV 448
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 67/142 (47%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME+NG+ + T N+L++ ++ + + +F ++ + G HP+ TF +LIK L
Sbjct: 84 MEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGE 143
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + D++ + G+ + + Y + LC + + A+ + ++ P+ Y
Sbjct: 144 VHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYST 203
Query: 421 LMTKWCAHNRVDKANALFDEAV 442
++ C V+ A L+ E V
Sbjct: 204 IIDSMCKDKLVNDAFDLYCEMV 225
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 9/293 (3%)
Query: 198 DKDSLRLVVEKLCENGYAS-YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ LC+NG E L + + PD +I G+C +G +DEA L
Sbjct: 356 DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 415
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
R M G TV+Y +L + R D AE+++ M G P N TFN L
Sbjct: 416 RSMAACGCRPNTVSYTIVLKGLCSAERWVD-------AEELMSQMIQQGCPPNPVTFNTL 468
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK E AI+L +M GC P+ ++ +I L +A E E+++ M G
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGM 528
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + L G RI + + +FE ++ D+ Y+ +++ C D+A
Sbjct: 529 SPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIE 588
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET-LPEKMARKRRRLKQ 488
V +G Y + R L VK+ ++ T L K A ++ +K
Sbjct: 589 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALRKHLMKH 641
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 14/279 (5%)
Query: 173 LVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
LVRA GR L + M R G + +E C A +++D
Sbjct: 117 LVRALCARGRIADALAVLDDMAR-RGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGR 175
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKD 286
D C+L+++ C G +DEA RL R++ G E V+YN +L LC
Sbjct: 176 GCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVL---RGLCMA-- 230
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + ++ +M G P N+ TF+ LI +LC+ E ++ +M E GC P+
Sbjct: 231 --RRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ +I + + R+ +++RM S G + Y L LC +R E+A + +M
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
D T+++L+ C + VD+ + ++ + +G
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHG 387
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 114/277 (41%), Gaps = 25/277 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
++ +V AG P ++ F ++ LC NG ++ A
Sbjct: 240 MEEMVAAGCPPNIVTF-----------------STLIGHLCRNGLFERVHEVHAQMAEHG 282
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD ++ +I G C + +L+ A+ + M G V YN +L LC D +
Sbjct: 283 CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLL---KGLC-SADRW 338
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EAE +L +M P + TFN+L+ LC+ + I++ +M E GC P+ T+
Sbjct: 339 E---EAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITY 395
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I + + E ++ M + G Y L LC ER A + +M
Sbjct: 396 TTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQ 455
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ T++ L+ C V++A L + + NG
Sbjct: 456 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 12/280 (4%)
Query: 188 RMERD----YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKG 242
R+ RD +G + D S V+ LC + + L+++ P + + LI
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH 261
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
C +G + + +M G Y I+D +C+++ RL+ A +L M
Sbjct: 262 LCRNGLFERVHEVHAQMAEHGCAPDVRMYATIID---GVCKEE---RLEV-ARGILNRMP 314
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G+ NV +N L+ LC R E+A L M + C ++ TF +L+ L Q V
Sbjct: 315 SYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVD 374
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E++++M G Y + C I++A+ + M G P++ +Y +++
Sbjct: 375 RVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVL 434
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
C+ R A L + ++ G P + +L K
Sbjct: 435 KGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 474
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
V N T+ L+ LC R DA+ + M GC P + V +++ +A+
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF-EKMKTDGHNPDSETYDLLMTK 424
++ + G A+ + L +C +++A+ + + + + G PD +Y+ ++
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 425 WCAHNRVDKANALFDEAVRNG 445
C R L +E V G
Sbjct: 227 LCMARRWGHVQDLMEEMVAAG 247
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 129/270 (47%), Gaps = 12/270 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
ID + G + F+RMERD G + D + +V LC +G S A +L++D +
Sbjct: 122 IDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ +I + +GK EA +L EM R + YN + ++ LC
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL---INGLCMHG--- 234
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+D EA+++L M G +V T+N LI+ CK +R ++ KLF M + G + T+
Sbjct: 235 RVD-EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 293
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I+ +QA R E+ RM S + Y L LC R+E+A+ +FE M+
Sbjct: 294 NTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQK 350
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
D TY++++ C V+ A LF
Sbjct: 351 SEIELDITTYNIVIHGMCKIGNVEDAWDLF 380
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T++S I+ + R + +ME + GF+ D +++ C+ G + A +L
Sbjct: 82 TVSSLINGFCQGNRVFDAIDLVSKME-EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 140
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ D + + L+ G C G+ +A RL R+M + + ++D K
Sbjct: 141 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK--- 197
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ F SEA K+ +M V +V T+N LI+ LC R ++A ++ M GC P
Sbjct: 198 -EGKF---SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 253
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI ++ RV EG ++ M G Y + R + A +F
Sbjct: 254 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 313
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M + P+ TY +L+ C + RV+KA LF+ ++ +E+ Y +
Sbjct: 314 SRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 362
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 9/270 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ L R R L +M + +G++ D ++ ++ C+ A LV
Sbjct: 52 INCLCRCSRFVIALSVVGKMMK-FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 110
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PD I + +I G C G +++A L M R G V YN + V+ LC
Sbjct: 111 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL---VAGLCCSGRW- 166
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
S+A +++ DM + NV TF +I K + +A+KL+ M P+ T+
Sbjct: 167 ---SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 223
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L RV E +M+D M + G Y + C +R+++ +F +M
Sbjct: 224 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 283
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
G D+ TY+ ++ + R D A +F
Sbjct: 284 RGLVGDTITYNTIIQGYFQAGRPDAAQEIF 313
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 11/186 (5%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ ++ ++N++I+ LC+ R A+ + +M ++G P+ T LI Q R
Sbjct: 36 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 95
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + +++ +M+ G+ Y + C I + A+ +F++M+ DG D+ TY+
Sbjct: 96 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 155
Query: 421 LMTKWCAHNR-VDKANALFDEAVRNGV-EVKPKEYRVDPRYLKKPIAVKKGKKRET--LP 476
L+ C R D A + D +R+ V V +D + VK+GK E L
Sbjct: 156 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID-------VFVKEGKFSEAMKLY 208
Query: 477 EKMARK 482
E+M R+
Sbjct: 209 EEMTRR 214
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 118/287 (41%), Gaps = 55/287 (19%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID V+ G+ ++ + +E M R D + ++ LC +G A++++
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + LI G+C ++DE +L REM + G T+ YN I+ + R
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305
Query: 284 ---KKDPF-RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
++ F R+DS N+ T+++L+ LC R E A+ LF M +
Sbjct: 306 PDAAQEIFSRMDSRP--------------NIRTYSILLYGLCMNWRVEKALVLFENMQKS 351
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
+ TT+ ++I +C I +E A
Sbjct: 352 EIELDITTYNIVIHG-----------------------------------MCKIGNVEDA 376
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+F + G PD +Y +++ +C + DK++ L+ + +G+
Sbjct: 377 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 42/211 (19%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+YN +++C+ + R F + A V+ M G +V T + LI+ C+ R DA
Sbjct: 47 SYNIVINCLCRCSR----FVI---ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 99
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
I L +M E G P+ + +I + V + E+ DRM+ G Y +
Sbjct: 100 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 159
Query: 390 LCGIER-----------------------------------IEQAMSVFEKMKTDGHNPD 414
LC R +AM ++E+M +PD
Sbjct: 160 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 219
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY+ L+ C H RVD+A + D V G
Sbjct: 220 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 250
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++ F+ ++S + K + + I LF+ M G + ++ ++I L + +R ++
Sbjct: 9 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M GY + C R+ A+ + KM+ G PD Y+ ++ C
Sbjct: 69 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 128
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
V+ A LFD R+GV Y
Sbjct: 129 GLVNDAVELFDRMERDGVRADAVTY 153
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 155/365 (42%), Gaps = 15/365 (4%)
Query: 80 LPISQ-RLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFT 138
LPI + R L P+P+LVQ L G+A W ++SHT
Sbjct: 121 LPIEEARTALDDCGFIPSPNLVQKLLRRLQYDGKAAFRVFQWAGSQPDYSHTVSVYHTMI 180
Query: 139 DYFGRRKDFKAIHDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFK 196
G + F + + + ++ +TL I R A + + F M++ +
Sbjct: 181 SILGVHRKFDKGWGLIRKMHERAMVNRQTLMIMIKRYAAAHDARKAIKTFHAMDK-FKLA 239
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWC-VDGKLDEAKRL 255
D D ++ LC N + AE+L+ + K ++++ GWC + + + KRL
Sbjct: 240 ADSDDFLCLLCALCRNMFVEEAEELIHFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRL 299
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
EM +Y ++ C SK + D RL E +K G N++ +N
Sbjct: 300 WEEMSNLCITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKK-------KGFTPNLKVYNA 352
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I L K R ++A+ LF ++ E G HPN T+ LI L + + E +D+M G
Sbjct: 353 VIYVLSKERCVKEALNLFNKIREMGFHPNAVTYTYLIYLLCRTWKPEEAYSYLDKMIMEG 412
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ + D Y R +E +F+KM +G P ETY + + + C+ + + A
Sbjct: 413 F-VPTIDIYHAFFRF--VENEGAICKLFDKMFENGCAPTMETYIMSIRRCCSWSDYENAF 469
Query: 436 ALFDE 440
L+++
Sbjct: 470 KLWND 474
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK-LFYRMGEWGCHPNETTFLVL 351
EAE+ L+ P ++FNV++ C I +K L+ M P+ ++ +
Sbjct: 260 EAEE-LIHFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMSNLCITPDAFSYTTV 318
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I +A + + + D MK G+ K Y + L +++A+++F K++ G
Sbjct: 319 ICCFSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEALNLFNKIREMGF 378
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
+P++ TY L+ C + ++A + D+ + G Y R+++ A+ K
Sbjct: 379 HPNAVTYTYLIYLLCRTWKPEEAYSYLDKMIMEGFVPTIDIYHAFFRFVENEGAICK 435
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 8/278 (2%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I+ V GR + G D + ++ LC+ GY A +L+ +
Sbjct: 360 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +LI +C +G+L+EA+ + EM G L V YNC+ +S LC+ +
Sbjct: 420 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL---ISALCKDEKV- 475
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A + DM G ++ TFN LI LCK+ + E+A+ L+ M G N T+
Sbjct: 476 ---QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 532
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + + E ++++ M G + Y + LC IE+ +++FE M +
Sbjct: 533 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 592
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G NP++ + ++L+ C + A + + G+
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 630
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 19/304 (6%)
Query: 153 FLVDNKEVLGPKTLASC----------IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+LV +E++ + C IDR + GR + + M G +
Sbjct: 404 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNAVGY 462
Query: 203 RLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ LC++ A + D +++ PD + LI G C K +EA L ++M
Sbjct: 463 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 522
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G T+ YN + + R+ EA K++ DM + G P + T+N LI LC
Sbjct: 523 EGVIANTITYNTL---IHAFLRRGAM----QEALKLVNDMLFRGCPLDDITYNGLIKALC 575
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ E + LF M G +PN + +LI L + + E + M G
Sbjct: 576 RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 635
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + LC R ++A+++F+K++ +G PD+ TY+ L++ C D A+ L
Sbjct: 636 TYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 695
Query: 442 VRNG 445
V +G
Sbjct: 696 VDSG 699
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 14/286 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L + GR +VL G D ++ + LC+ A KLV
Sbjct: 259 IHALXKVGRVNEVL-KLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG 317
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F P+ +L+ G C GK+DEA+ L ++ V +N +++ + R
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPN----VVLFNTLIN--GYVSRG---- 367
Query: 289 RLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RLD EA+ V+ + M G ++ T+N LI LCK A +L M GC PN T
Sbjct: 368 RLD-EAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 426
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +LI + R+ E ++D M G A+ Y ++ LC E+++ A+++F M
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 486
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ G PD T++ L+ C N+ ++A L+ + + GV Y
Sbjct: 487 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 532
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 17/280 (6%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF + + +++ LC G A L+ N P+ + + LI G+ G+LDEAK
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN---PNVVLFNTLINGYVSRGRLDEAK 373
Query: 254 RLARE-MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ E M G YN + + LC+K A +++ +M+ G NV T
Sbjct: 374 AVMHESMLSVGCGPDIFTYNTL---ILGLCKKGYLV----SARELMNEMQIKGCEPNVIT 426
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +LI CK R E+A + M G N + LI +L + +V + M M
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 486
Query: 373 SAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
S G K D + F + LC + + E+A+ +++ M +G ++ TY+ L+ +
Sbjct: 487 SKGC---KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 543
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+ +A L ++ + G + Y + L + ++KG
Sbjct: 544 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 583
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 13/261 (4%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
F+ G+ D ++++KL G + L+ E I + + L++K +
Sbjct: 97 LFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHY 156
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTV--AYNCILDCV-SKLCRKKDPFRLDSEAEKVLLD 300
G +A RL +M RG + +YN +LD + + C K P V +
Sbjct: 157 GRAGLPGQATRLLLDM-RGVYSCEPTFRSYNVVLDVLLAGNCPKVVP--------NVFYE 207
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ V TF V++ LC + + A L M GC PN + LI +L + R
Sbjct: 208 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGR 267
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E ++++ M G + + + LC + RI +A + ++M G P+S TY +
Sbjct: 268 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 327
Query: 421 LMTKWCAHNRVDKANALFDEA 441
LM C +VD+A L ++
Sbjct: 328 LMHGLCRMGKVDEARMLLNKV 348
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 9/227 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + + + LG ++ M + G + + ++ G A KLV D
Sbjct: 496 TFNSLIFGLCKVNKFEEALGLYQDMLLE-GVIANTITYNTLIHAFLRRGAMQEALKLVND 554
Query: 225 TANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P DD + LIK C G +++ L +M G ++ N + ++ LCR
Sbjct: 555 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL---INGLCR 611
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A + L DM + G+ ++ T+N LI+ LCK R+++A+ LF ++ G P
Sbjct: 612 TGNI----QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 667
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+ T+ LI + + ++ R +G+ + +Y ++
Sbjct: 668 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 714
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 121/327 (37%), Gaps = 48/327 (14%)
Query: 119 HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVR 175
W + H + D G +FK I L+ K+ V + R
Sbjct: 99 QWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGR 158
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI 235
AG P Q M Y CE + SY + +
Sbjct: 159 AGLPGQATRLLLDMRGVYS---------------CEPTFRSY---------------NVV 188
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
D+L+ G C + EM G + ++ LC + +DS A
Sbjct: 189 LDVLLAGNCPK----VVPNVFYEMLSKGISPTVYTFGVVM---KALCLVNE---VDS-AC 237
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+L DM +G N + LI L K+ R + +KL M GC P+ TF I L
Sbjct: 238 ALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 297
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ R+ E +++DRM G+ Y + LC + ++++A + K+ NP+
Sbjct: 298 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNV 353
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAV 442
++ L+ + + R+D+A A+ E++
Sbjct: 354 VLFNTLINGYVSRGRLDEAKAVMHESM 380
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 170/393 (43%), Gaps = 57/393 (14%)
Query: 71 LLENL---EADPLPISQRLHLIFS----HVTPT---------PSLVQS--TLNFSPEAGR 112
LL NL E+D + + RL I S H +P+ PS V S +L+ P+
Sbjct: 48 LLRNLPEEESDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTA- 106
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPKTLASCID 171
L F+HW++QN + H+ + + ++ L++N V + K I
Sbjct: 107 --LNFSHWISQNPRYKHSVYS-------------YASLLTLLINNGYVGVVFKIRLLMIK 151
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA-SYAEKLVKDTANEIF 230
G VL +M +D F+ +L++ C N S A + D +++
Sbjct: 152 SCDSVGDALYVLDLCRKMNKDERFEL---KYKLIIG--CYNTLLNSLARFGLVDEMKQVY 206
Query: 231 PD---DKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ DK+C + ++ G+C G ++EA + ++ G + Y + +
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL---IMGY 263
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C++KD LDS A KV +M G RN + LI LC RR ++A+ LF +M + C
Sbjct: 264 CQRKD---LDS-AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 319
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P T+ VLIKSL + R E ++ M+ G Y + LC + E+A
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ +M G P+ TY+ L+ +C ++ A
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 10/285 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I L + R ++ L + ME + G K + + ++++ LC A +L+
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEME-ETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + P+ + LI G+C G +++A + M T YN + + C
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN---ELIKGYC 439
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ +A VL M V +V T+N LI C+ + A +L M + G
Sbjct: 440 KSNV-----HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P++ T+ +I SL ++ RV E ++ D ++ G Y + C ++++A +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
EKM + P+S T++ L+ CA ++ +A L ++ V+ G++
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 18/278 (6%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL 238
P L F + ++ +K S ++ L NGY +F KI L
Sbjct: 103 PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGV-----------VF---KIRLL 148
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGG-FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+IK G L R+M + FEL Y I+ C + L F L E ++V
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFEL---KYKLIIGCYNTLLNSLARFGLVDEMKQV 205
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
++M + V N+ T+N +++ CK+ E+A + ++ E G P+ T+ LI Q
Sbjct: 206 YMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ ++ + M G + Y + LC RI++AM +F KMK D P T
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y +L+ C R +A L E G++ Y V
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 123/299 (41%), Gaps = 27/299 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T S ID L ++ R + F+ +E+ G + +++ C+ G A ++ K
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ + LI G C DGKL EA L +M + G + TV+ + IL + +L +
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ-PTVSTDTIL--IHRLLK 614
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D S +++L +G + T+ I C+ R DA + +M E G P
Sbjct: 615 DGDFDHAYSRFQQML----SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL------------- 390
+ T+ LIK + +++ RM+ G + + + L
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 391 --CGIERI---EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
C + + + + + EKM P++++Y+ L+ C + A +FD RN
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 115/280 (41%), Gaps = 17/280 (6%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C +G A +L+ + + PD +I C +++EA L + + G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
V Y ++D K ++D EA +L M N TFN LI LC
Sbjct: 528 VNPNVVMYTALIDGYCK------AGKVD-EAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ ++A L +M + G P +T +LI L + +M S+G Y
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
F+ C R+ A + KM+ +G +PD TY L+ + + + N FD R
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK---GYGDLGQTNFAFDVLKR 697
Query: 444 ---NGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMA 480
G E P ++ +K + +K GK++ + PE A
Sbjct: 698 MRDTGCE--PSQHTF-LSLIKHLLEMKYGKQKGSEPELCA 734
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 124/303 (40%), Gaps = 22/303 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
I RL++ G F++M G K D + ++ C G AE ++ K N
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE------------LGTVAYNCILD 276
+ PD LIKG+ G+ + A + + M G E L + Y
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+LC + D+ E +L M + V N +++ LI +C++ A K+F M
Sbjct: 728 SEPELCAMSNMMEFDTVVE-LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 337 G-EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
G P+E F L+ + + E +++D M G+ + + + + L +CG+ +
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH-LPQLESCKVL--ICGLYK 843
Query: 396 I---EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
E+ SVF+ + G+ D + +++ V+ LF+ +NG + +
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT 903
Query: 453 YRV 455
Y +
Sbjct: 904 YSL 906
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 294 AEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
AEKV M+ N G+ + FN L+S CK+++ +A K+ M G P + VLI
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
LY+ G + + GY + + + + +E +F M+ +G
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
Query: 413 PDSETYDLLM 422
S+TY LL+
Sbjct: 899 FSSQTYSLLI 908
>gi|242063722|ref|XP_002453150.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
gi|241932981|gb|EES06126.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
Length = 757
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 162/385 (42%), Gaps = 24/385 (6%)
Query: 81 PISQRLHLIFSHVTPT--PSLVQSTLNFSPEAGRA--ILGFNHWLTQNANFSHTDETLSF 136
P + RL ++PT LV ++ + AGRA L F + + F +T +
Sbjct: 91 PWTTRLENSIRLLSPTLDAPLVHGVISGAASAGRAELALQFFRFAYRRGGFRPDGDTFAL 150
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEV--LGPK--TLASCIDRLVRAGRPTQVLGFFERMERD 192
R+ ++D + P TLA+ I RA P + + F RM D
Sbjct: 151 LVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLF-RMMPD 209
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDE 251
G R S V++ + G + A ++ A+ + PD + LI G+ + K++
Sbjct: 210 LGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMET 269
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A R+ EM G YN +L+ R D L+S A KV +M G+ RN
Sbjct: 270 AVRVFGEMKGHGVTPDVTTYNALLNA---WVRTGD---LES-ARKVFDEMTGKGIERNSV 322
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ-AARVGEGDEMIDR 370
++NV+I + R E+A+ LF MGE G +E TF L+ L R E + +D
Sbjct: 323 SYNVMIKGYVEGNRVEEAVALFAEMGEKGLRLSEKTFAALMPGLCDDQGRAAEARKAVDD 382
Query: 371 MKSAGYAIGKKDYYEFL---TRLCGIERIEQAMSVFEKMKTDGHN-PDSETYDLLMTKWC 426
M A + KD FL T LC ++ A+ V K H D Y +LM C
Sbjct: 383 M--AERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHRKSGQFKHVLVDPRQYGVLMEGLC 440
Query: 427 AHNRVDKANALFDEAVRNGVEVKPK 451
A + + A + DE + G + PK
Sbjct: 441 AGGKSEMAIEVLDELMEKGTLLSPK 465
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 44/286 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT--AN 227
I AGR L FF R GF+ D D+ L+V L ++A LV DT +
Sbjct: 116 ISGAASAGRAELALQFFRFAYRRGGFRPDGDTFALLVPALASRRMLNHARCLVLDTMPSF 175
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ PD+ LI + EA +L R M G ++YN +L + LCR ++
Sbjct: 176 SVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYNAVLKAI--LCRGREA 233
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
A ++ M +GV +V T+N LI ++ E A+++F M G P+ TT
Sbjct: 234 M-----ARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGEMKGHGVTPDVTT 288
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ A V GD +E A VF++M
Sbjct: 289 YNALLN-----AWVRTGD------------------------------LESARKVFDEMT 313
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G +S +Y++++ + NRV++A ALF E G+ + K +
Sbjct: 314 GKGIERNSVSYNVMIKGYVEGNRVEEAVALFAEMGEKGLRLSEKTF 359
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILDCVSKLCRKKDPFRL 290
D + +I G G+ + A + R YR GGF + ++ ++ R+
Sbjct: 108 DAPLVHGVISGAASAGRAELALQFFRFAYRRGGFRPDGDTFALLVPALASR-------RM 160
Query: 291 DSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ A ++LD M V + T LIS + ++A+KLF M + G ++
Sbjct: 161 LNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYN 220
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++K++ R + + M + G A Y + +++E A+ VF +MK
Sbjct: 221 AVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGEMKGH 280
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G PD TY+ L+ W ++ A +FDE G+E Y V
Sbjct: 281 GVTPDVTTYNALLNAWVRTGDLESARKVFDEMTGKGIERNSVSYNV 326
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 19/258 (7%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE---IFPDDKICDL-----LIKGWCVDGKLDEAKRL 255
+++E LC G + A +++ + + + P + + +I+ C +G +A+
Sbjct: 434 VLMEGLCAGGKSEMAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEHLCSNGSTTKAETF 493
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
R++ + G + A+N L R + A+++L M VP + E+ +
Sbjct: 494 FRQLMKKGVD-DKAAFN-------SLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHVL 545
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ + K DA M + G P+ F ++++L+ R+ ++ M G
Sbjct: 546 LVDSFLKKNEPADAKTALDSMMQHGHLPSPALFKSVMEALFNDGRIQTASRVMKSMIEKG 605
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
++ L L +E+A+ M +G PD D L+ C ++RV +A
Sbjct: 606 VTENMDMAHKILEALFTRGHVEEAIGRVNLMVENGCMPD---LDKLLVGLCDNDRVMEAQ 662
Query: 436 ALFDEAVRNGVEVKPKEY 453
L D A+ +V Y
Sbjct: 663 KLADFALDRDFDVSFSTY 680
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 156/365 (42%), Gaps = 29/365 (7%)
Query: 81 PISQRLHLIFSHVTPTPS--LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFT 138
P S L + + P+ S V TL +A L F W+ + F+H +++
Sbjct: 170 PWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKA-LHFFRWV-EAKGFTHNEQSYFLMI 227
Query: 139 DYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
+ GR ++ A +F+ ++ G + G V+ F
Sbjct: 228 EILGRSRNLNAARNFVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTF------------- 274
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+SL +V K G S A++L + + + PD ++LI+G+C++ +DE
Sbjct: 275 -NSLLSIVLK---RGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFF 330
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+EM R + V YN ++D LCR ++ K ++ N P NV T+ L
Sbjct: 331 KEMSRFKCDPDVVTYNTLVD---GLCRAGK-VKIAHNVVKGMVKKSPNLSP-NVVTYTTL 385
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I C + +A+ L M G PN+ T+ LI+ L +A ++ + E+++ M G
Sbjct: 386 IRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGG 445
Query: 377 AIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
I L + C + ++E+A SVFEKM PDS TY +L+ C +A
Sbjct: 446 FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAE 505
Query: 436 ALFDE 440
FDE
Sbjct: 506 EFFDE 510
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 113/276 (40%), Gaps = 29/276 (10%)
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
+L+R P + L FF +E GF ++ S L++E L + + A N +F
Sbjct: 196 QLIRT--PAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAAR-------NFVFS 245
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+K E+ ++ + M G V +N +L V K R +L
Sbjct: 246 IEK-----------KSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLF 294
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
E ++ GV + TFN+LI C ++ F M + C P+ T+ L
Sbjct: 295 DEM------LDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTL 348
Query: 352 IKSLYQAARVGEGDEMIDRM--KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+ L +A +V ++ M KS + Y + C + + +A+S+ +M +
Sbjct: 349 VDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSR 408
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ TY+ L+ C ++DK + + V +G
Sbjct: 409 GLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG 444
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 3/158 (1%)
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+ L +E G RN+ + ++ K ++IK+F M E G P+ TF L+
Sbjct: 221 QSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTFNSLLSI 280
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDY-YEFLTR-LCGIERIEQAMSVFEKMKTDGHN 412
+ + R ++ D M Y + Y + L R C +++ F++M +
Sbjct: 281 VLKRGRTSMAKQLFDEMLDT-YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCD 339
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
PD TY+ L+ C +V A+ + V+ + P
Sbjct: 340 PDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSP 377
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 24/261 (9%)
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVD 246
E + D G K + + E LC NG AE++ + D LI G C +
Sbjct: 515 EILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCRE 574
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G + L M R F Y ++D L +K DP EK+L + + +
Sbjct: 575 GTPEAGFDLLVLMLRRDFVPDAETYGLMID---GLLKKGDPVLAHKSLEKML---KSSHL 628
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P ++L + + K RR I L ++ LY++ +
Sbjct: 629 PTTAIFHSILAALVEKERRIRQNIDLSTHT---------------VRLLYKSGLQDKAFM 673
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
I + GY + ++ F LC ++ +A + + D + +++ C
Sbjct: 674 TIGLLYENGYLVKMEELVSF---LCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLC 730
Query: 427 AHNRVDKANALFDEAVRNGVE 447
++V +A AL+ E V G++
Sbjct: 731 KAHKVSEAFALYYELVEKGMQ 751
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 143/367 (38%), Gaps = 48/367 (13%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVL---GPKTLASCIDRLVRAGRPTQV 182
F H+ T + D F R K + + L + +T I A P +
Sbjct: 54 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENG-----------------------YASYAE 219
ME DYG + LV+ LC++G Y + +
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173
Query: 220 KLVKD-------------TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
L K+ TAN P + L+ G C G+L+EA L R++ G
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V Y ++D + K +K F EA K+ +M G+ + + LI L + +
Sbjct: 234 DVVTYTSLIDGLGK---EKRSF----EAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKI 286
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
A ++ M GC P+ T +I L +A R+G + M++ G A + Y
Sbjct: 287 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 346
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LC +++ A+ + +MK PD+ TY++L+ C V+ A A FDE + G
Sbjct: 347 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG- 405
Query: 447 EVKPKEY 453
KP Y
Sbjct: 406 -CKPDVY 411
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 12/289 (4%)
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
VL + I L++AG+ Q ++ M G D +L +++ LC+ G A
Sbjct: 267 VLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ-GCVPDVVTLSTMIDGLCKAGRIGAAV 325
Query: 220 KLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
++ K A + P++ + LI G C K+D A + +M + T+ YN ++D
Sbjct: 326 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID-- 383
Query: 279 SKLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LC+ D EA + D M G +V T+N+L+S CK ++ A +F M
Sbjct: 384 -GLCKSGDV-----EAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMS 437
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
C PN T+ LI L + ++ + MK G Y + LC ++E
Sbjct: 438 SSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLE 497
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+F++M+ G +S+T L+ C NRVD+A +LF+ + G+
Sbjct: 498 GGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 123/294 (41%), Gaps = 9/294 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VDN T S ID L + R + F+ M G D ++ L + G
Sbjct: 226 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR-GLVLDTVCYTALIRGLLQAG 284
Query: 214 YASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A + K T+ PD +I G C G++ A R+ + M G V Y+
Sbjct: 285 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 344
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+ + LC+ + ++D E +L M+ + T+N+LI LCK E A
Sbjct: 345 AL---IHGLCKAR---KMDCALE-MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 397
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M E GC P+ T+ +L+ +A + D M S+ + Y ++ LC
Sbjct: 398 FDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCK 457
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ +A F+ MK G PDS Y L+ C +++ LFDE R+GV
Sbjct: 458 RRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
R GF+ N +LD ++ R + EA +L + +VET+NVLI+
Sbjct: 52 RFGFQHSVHTGNALLDVFARTKRHR-------EAGNLLKNELATTFLPDVETWNVLITGY 104
Query: 321 CKIRRSEDAIKLFYRMGE-WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C R E+A + M E +G P+ T +++ L ++ +V + + + G I
Sbjct: 105 CLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTID 164
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + L ++I+ A+++ EK+ +G P TY+ L+ C R+++A L
Sbjct: 165 IHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 224
Query: 440 EAVRNG 445
+ V NG
Sbjct: 225 KIVDNG 230
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 9/281 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ ID L + F +ME G K D + ++ LC G S A +L+ D
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE 319
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+I P+ + LI + +GKL EA++L EM + + V YN + ++ C
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL---INGFCMHD- 375
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
RLD EA+++ M +V T+N LI CK +R E+ ++LF M + G N
Sbjct: 376 --RLD-EAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI+ L+QA ++ +M S G Y L LC ++E+A+ VFE +
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ P+ TY++++ C +V+ LF GV+
Sbjct: 493 QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 144/349 (41%), Gaps = 34/349 (9%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD +G K T + I L + ++ + +RM G + D + VV L
Sbjct: 173 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGL 231
Query: 210 CENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ G A L+K +I + I + +I G C +D+A L +M G +
Sbjct: 232 CKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 291
Query: 269 VAYNCILDCVSKLCRKKDPFRLDS----------------------------EAEKVLLD 300
YN ++ C+ R D RL S EAEK+ +
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 351
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + N+ T+N LI+ C R ++A ++F M C P+ T+ LIK +A R
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V EG E+ M G Y + L + A +F+KM +DG PD TY +
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
L+ C + +++KA +F+ ++ +E Y + + K V+ G
Sbjct: 472 LLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDG 520
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 25/291 (8%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
+GR D + +++ K T S ID + G+ + F+ M +R D
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM-----IQRSID 358
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIF---------PDDKICDLLIKGWCVDGKLDE 251
+V NG+ + ++L D A +IF PD + LIKG+C +++E
Sbjct: 359 P-NIVTYNSLINGFCMH-DRL--DEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEE 414
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
L REM + G TV YN + + L + D A+K+ M +GVP ++
Sbjct: 415 GMELFREMSQRGLVGNTVTYNTL---IQGLFQAGDC----DMAQKIFKKMVSDGVPPDII 467
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+++L+ LCK + E A+ +F + + PN T+ ++I+ + +A +V +G ++ +
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
G Y ++ C E+A ++F +MK DG PDS Y+ L+
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 578
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 7/200 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K D L +M G Y+ +L+C + R + P L VL M G
Sbjct: 96 KFDVVISLGEQMQNLGIPHNHYTYSILLNCFCR--RSQLPLAL-----AVLGKMMKLGYE 148
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ T + L++ C +R +A+ L +M E G P+ TF LI L+ + E +
Sbjct: 149 PDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVAL 208
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
IDRM + G Y + LC I+ A+S+ +KM+ + Y+ ++ C
Sbjct: 209 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCK 268
Query: 428 HNRVDKANALFDEAVRNGVE 447
+ +D A LF++ G++
Sbjct: 269 YKHMDDAFDLFNKMETKGIK 288
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+L+ +C +L A + +M + G+E V + +L+ C K R+ SEA +
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN---GYCHGK---RI-SEAVAL 173
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ M G + TFN LI L ++ +A+ L RM GC P+ T+ ++ L +
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ ++ +M+ Y + LC + ++ A +F KM+T G PD T
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293
Query: 418 YDLLMTKWCAHNRVDKANALFDEAV 442
Y+ L++ C + R A+ L + +
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMI 318
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 20/241 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I +A R + + F M + G + + +++ L + G A+K+ K
Sbjct: 398 TYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P D I +L+ G C GKL++A + + + E YN +++ + K +
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D + L + GV NV + +IS C+ E+A LF M E G P
Sbjct: 517 VEDGWDL-------FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 569
Query: 344 NETTFLVLIKSLYQAARVGEGD-----EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
+ + LI+ AR+ +GD E+I M+S G+ +G + + R+E+
Sbjct: 570 DSGCYNTLIR-----ARLRDGDKAASAELIKEMRSCGF-VGDASTISMVINMLHDGRLEK 623
Query: 399 A 399
+
Sbjct: 624 S 624
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ G+C ++ EA L +M G++ TV +N ++ + L K
Sbjct: 149 PDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLF-LHNKA----- 202
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
SEA ++ M G ++ T+ +++ LCK + A+ L +M + N +
Sbjct: 203 -SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNT 261
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L + + + ++ ++M++ G Y ++ LC R A + M
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
NP+ T++ L+ + ++ +A LFDE ++ ++
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 358
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 8/276 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L + G + F ++ + +K + + +++ C+ G + AE L+
Sbjct: 288 THTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGR 347
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI G C G D A L +M GF YN I + C+
Sbjct: 348 MVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAI---IGGFCK 404
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K +A KVL G+ + T+ +LI+ CK A+ LF +M E CHP
Sbjct: 405 KGKI----QQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHP 460
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +I Q ++ + ++ D+ S G K+ Y + C + + A+ VF
Sbjct: 461 DIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVF 520
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
E+M G PD TY L++ C +R+++A ALF+
Sbjct: 521 ERMVQHGCLPDPITYGALISGLCKESRLEEARALFE 556
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 107/288 (37%), Gaps = 44/288 (15%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEA 252
G + D S R +V C+ G A+ L+ E F D C ++++ +C G+ +
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L M G V Y +D + K K F VL +M G+ NV T
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFH-------VLEEMVGKGLKPNVYT 288
Query: 313 FNVLISNLCKIRRSEDAIKLFY------------------------------------RM 336
LI LCKI +E A +LF RM
Sbjct: 289 HTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRM 348
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
E G PN T+ LI + E++++MK G+ Y + C +I
Sbjct: 349 VEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKI 408
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+QA V + G PD TY +L+T+ C + A LF++ N
Sbjct: 409 QQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAEN 456
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 29/245 (11%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD---- 286
PD + L+ G C +G+ +EA L M+R GF L + ++ + R +D
Sbjct: 179 PDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGL 238
Query: 287 ----------PFRLD--------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
P ++ +A VL +M G+ NV T LI LCK
Sbjct: 239 FGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298
Query: 323 IRRSEDAIKLFYRMGEWGCH-PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
I +E A +LF ++ + + PN T+ V+I + ++ + ++ RM G A
Sbjct: 299 IGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + C ++A + KMK +G P+ TY+ ++ +C ++ +A + A
Sbjct: 359 TYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMA 418
Query: 442 VRNGV 446
G+
Sbjct: 419 TSQGL 423
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 138/335 (41%), Gaps = 17/335 (5%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLA---SCIDRLVRAGRPTQV 182
FS T + F R+ F+ + E+ P + + +D L + G Q
Sbjct: 211 GFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQA 270
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDL 238
E M G K + + +++ LC+ G+ A KLVK ++ + P+ +
Sbjct: 271 FHVLEEMVGK-GLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYK--PNVHTYTV 327
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G+C +GKL A+ L M G T Y ++D CR R A +++
Sbjct: 328 MIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLID---GHCRGGSFDR----AFELM 380
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ G N+ T+N +I CK + + A K+ G P++ T+ +LI +
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQ 440
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ ++ ++M Y + C ++EQ+ +F+K + G P +TY
Sbjct: 441 GHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTY 500
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
++ +C + A +F+ V++G P Y
Sbjct: 501 TSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITY 535
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA+ +L M G + T V++ C+ R D LF RM E G PN + +
Sbjct: 199 EADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWV 258
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM-KTDGH 411
L + V + +++ M G + + LC I E+A +F K+ K+ +
Sbjct: 259 DGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSY 318
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ TY +++ +C ++ +A L V G+ Y
Sbjct: 319 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 360
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 6/162 (3%)
Query: 293 EAEKVLLDMEYNGVPRNVETFN-VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA +LL++ +G+P VET N VL L + A + F M G P+ +F L
Sbjct: 131 EATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRAL 187
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ Q R E D ++ M G+++ + C R +F +M G+
Sbjct: 188 VLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGN 247
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ Y + C V +A + +E V G +KP Y
Sbjct: 248 PPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKG--LKPNVY 287
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 9/270 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID L ++ + L RME D G + D + ++ LC +G A ++V T E
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEVD-GIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKRE 251
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I+PD + LI +G++ EA+ L EM R + V Y+ + + LC
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL---IYGLCMYS--- 305
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RLD EAE++ M G +V T+++LI+ CK ++ E +KLF M + G N T+
Sbjct: 306 RLD-EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VLI+ +A ++ +E+ M G Y L LC +IE+A+ + M+
Sbjct: 365 TVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
G + D TY++++ C V A L+
Sbjct: 425 SGMDADIVTYNIIIRGMCKAGEVADAWDLY 454
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 9/300 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T S ++ R R L F+RM + G++ + +++ LC++ A L+ +
Sbjct: 153 TFGSLLNGFCRGDRIYDALYMFDRMV-EMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I PD + LI G C G+ D+A R+ M + +N ++D K R
Sbjct: 212 MEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
SEAE++ +M + ++ T+++LI LC R ++A ++F M GC P
Sbjct: 272 I-------SEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFP 324
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +LI ++ +V G ++ M G Y + C ++ A +F
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIF 384
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
+ M G P+ TY++L+ C + +++KA + + ++G++ Y + R + K
Sbjct: 385 KWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKA 444
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ G+C ++ +A + M G+E V YN I+D LC+ K
Sbjct: 149 PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIID---GLCKSKQV--- 202
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A +L ME +G+ + T+N LIS LC R +DA ++ M + +P+ TF
Sbjct: 203 -DNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNA 261
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI + + R+ E +E+ + M Y + LC R+++A +F M + G
Sbjct: 262 LIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKG 321
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY +L+ +C +V+ LF E + GV Y V
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTV 366
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 7/184 (3%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ G+P N+ T N+L++ C+ + A+ +M + G P+ TF L+ + R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDR 166
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + M DRM GY Y + LC ++++ A+ + +M+ DG PD+ TY+
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK--KRETLPEK 478
L++ C R D A + + E+ P + + VK+G+ + E L E+
Sbjct: 227 LISGLCNSGRWDDATRMVSCMTKR--EIYPDVFTFNALI---DACVKEGRISEAEELYEE 281
Query: 479 MARK 482
M R+
Sbjct: 282 MIRR 285
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 7/200 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K D L +M G N +L+C CR S A L M G
Sbjct: 96 KYDVVIYLWEQMQMLGIPHNLCTCNILLNC---FCRCSQL----SLALSFLGKMMKLGHE 148
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ TF L++ C+ R DA+ +F RM E G PN + +I L ++ +V ++
Sbjct: 149 PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
++RM+ G Y ++ LC R + A + M PD T++ L+
Sbjct: 209 LNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 428 HNRVDKANALFDEAVRNGVE 447
R+ +A L++E +R ++
Sbjct: 269 EGRISEAEELYEEMIRRSLD 288
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 64/138 (46%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++ F+ L+S + K+++ + I L+ +M G N T +L+ + +++ +
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M G+ + L C +RI A+ +F++M G+ P+ Y+ ++ C
Sbjct: 140 GKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKS 199
Query: 429 NRVDKANALFDEAVRNGV 446
+VD A L + +G+
Sbjct: 200 KQVDNALDLLNRMEVDGI 217
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 9/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D + + +VL E ++R G K ++ + ++ LC+ G AE++++ N+
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRK-GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
IFPD+ + LI G+ G + +L EM R V Y + + LC+
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSM---IHGLCQAGKVV 409
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA K+ +M G+ + T+ LI CK ++A L +M E G PN T+
Sbjct: 410 ----EARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTY 465
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ L + V +E++ M G Y + LC + IEQA+ + E+M
Sbjct: 466 TALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL 525
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G PD+ TY +M +C + KA+ L + G++
Sbjct: 526 AGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQ 564
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 116/285 (40%), Gaps = 43/285 (15%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC+ G A KL + ++ + PD+ LI G+C G++ EA L +M G
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
V Y ++D + K C + D A ++L +M G+ NV T+N LI+ LCK+
Sbjct: 458 LTPNVVTYTALVDGLCK-CGEVDI------ANELLHEMSEKGLQPNVCTYNALINGLCKV 510
Query: 324 RRSEDAIKL----------------------FYRMGEW-------------GCHPNETTF 348
E A+KL + +MGE G P TF
Sbjct: 511 GNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTF 570
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VL+ + + +G+ +I M G + + + C + + +++ M
Sbjct: 571 NVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHA 630
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G PD+ TY++L+ C + +A L E V G + Y
Sbjct: 631 QGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASY 675
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 128/304 (42%), Gaps = 13/304 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K+ ++H+ +V+ T + +D L + G M + G + + +
Sbjct: 441 GEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS-EKGLQPNVCT 499
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC+ G A KL+++ FPD ++ +C G++ +A L R M
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559
Query: 261 RGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
G + V +N +++ C+S + + E+++ M G+ N TFN L+
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLE---------DGERLIKWMLDKGIMPNATTFNSLMK 610
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C I+++ M G P+ T+ +LIK +A + E + M G+++
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSL 670
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + ++ E+A +FE+M+T G + E YD+ + + L
Sbjct: 671 TAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELC 730
Query: 439 DEAV 442
DEA+
Sbjct: 731 DEAI 734
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 13/238 (5%)
Query: 212 NGYASYAEKLV---KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
N + + E+L+ KD D +L++ G L EA +L ++ G +
Sbjct: 161 NSFDRFTERLIYTYKDWGAHPLVFDVFFQVLVEA----GLLLEAGKLFDKLLNYGVLVSV 216
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ N L ++L D R A +V + GV N ++N+++ LC++ + ++
Sbjct: 217 DSCNLFL---ARLSNSFDGIR---TAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKE 270
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A L +M G P+ ++ V++ Q ++G+ ++++ ++ G + Y ++
Sbjct: 271 AHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIIS 330
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC R+ +A V MK PD+ Y L++ + V LFDE R +
Sbjct: 331 FLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKI 388
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 7/242 (2%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+++ LC+NG A L +D P K L+ GWC +GKL EAK + ++ GF
Sbjct: 91 LLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGF 150
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
E V YN +L + + D + L L +M NV +F LI LC +
Sbjct: 151 EPDIVVYNNLLTGYAAAGKMVDAYDL-------LKEMRRKECEPNVMSFTTLIQALCAKK 203
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ E+A+++F+ M GC + T+ LI + ++ +G E++D M G+ Y
Sbjct: 204 KMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYL 263
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ E +E+ + + E+M+ G PD Y++++ C + + +++E
Sbjct: 264 HIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEAT 323
Query: 445 GV 446
G+
Sbjct: 324 GL 325
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 8/184 (4%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+ C+LD LC+ EA + DM P ++ F L+ C+ + +A
Sbjct: 87 VFGCLLD---ALCKNGSV----KEAASLFEDMRIRFTP-TLKHFTSLLYGWCREGKLMEA 138
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ ++ E G P+ + L+ A ++ + +++ M+ + +
Sbjct: 139 KYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQA 198
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
LC +++E+AM VF +M++ G D+ TY L++ +C ++ K L D ++ G
Sbjct: 199 LCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPN 258
Query: 450 PKEY 453
P Y
Sbjct: 259 PMTY 262
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ++ L GR + F+ M R G K + +++ G S L+
Sbjct: 310 TYGSLLNYLCNNGRCREARFLFDSMIRK-GIKPNVAIYGILIHGYATKGALSEMHDLLNL 368
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + PD I +++ + +DEA + +M + G V Y ++D + KL R
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D ++ M GV N+ FN L+ LC + + E A + ++ M G P
Sbjct: 429 VDDAVLKFNQ-------MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP 481
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ F ++ +L +V + +ID M+ G G Y + C + RI++A
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSL 541
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ M + G PD TY+ L+ +C R+D A +F E +RNG+
Sbjct: 542 DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGI 584
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 129/326 (39%), Gaps = 56/326 (17%)
Query: 171 DRLVRAGRPTQVLGF---FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
D L+ RP V+ F + R G + LVV S +++++
Sbjct: 38 DGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVV---------SLFNRMIRECTI 88
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
++ PD +LI +C G+L+ + + G+ + + N +L LC K
Sbjct: 89 KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL---KGLCDAK-- 143
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW---GCHPN 344
RL + ++ M G +V ++N L+ C +R+E+A++L + M + C PN
Sbjct: 144 -RLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPN 202
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
++ ++I + +V + + M G Y + LC + +++A VF+
Sbjct: 203 VVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQ 262
Query: 405 KMKTDGHNPDSETYDLLM------TKW-----------------------------CAHN 429
+M G PD++TY+ L+ KW C +
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRV 455
R +A LFD +R G++ Y +
Sbjct: 323 RCREARFLFDSMIRKGIKPNVAIYGI 348
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C +D A+ + ++M G + YNC++ + + K+ R+ L
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRM-------L 296
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M +G+ + T+ L++ LC R +A LF M G PN + +LI
Sbjct: 297 EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATK 356
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E ++++ M G + + T I++AM +F KMK G +PD Y
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNY 416
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
L+ C RVD A F++ + GV
Sbjct: 417 GALIDALCKLGRVDDAVLKFNQMMNEGV 444
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 9/276 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLL 239
+ + F +M++ G D + +++ LC+ G A NE + P+ + + L
Sbjct: 396 EAMHIFNKMKQQ-GLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ G C K ++AK EM G V +N IL LC K + A++++
Sbjct: 455 VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTIL---CNLCTKGQVMK----AQRLID 507
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
ME G V ++ LI C + R ++A K M G P+E T+ L+ +A
Sbjct: 508 LMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ + + M G G Y L L R +A ++ M T G + Y+
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYN 627
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+++ +N VD+A LF +++ + +
Sbjct: 628 IILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 43/304 (14%)
Query: 182 VLGFFERMERDYGFKRDKD--SLRLVVEKLC-----ENGYASYAEKLVKDTANEIFPDDK 234
V+ F RM R+ K D + +++ C E+G+A++ L+ + + ++
Sbjct: 75 VVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFG--LILKSGWRV--NNI 130
Query: 235 ICDLLIKGWCVDGKLDEAKR-LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL--- 290
+ + L+KG C +L EA L + M G V+YN +L R ++ L
Sbjct: 131 VINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHM 190
Query: 291 --DSE--------------------------AEKVLLDMEYNGVPRNVETFNVLISNLCK 322
DS+ A + L+M G+ NV T+ +I LCK
Sbjct: 191 MADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ + A +F +M + G P+ T+ LI + E M++ M + G
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y L LC R +A +F+ M G P+ Y +L+ + + + + L + V
Sbjct: 311 YGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMV 370
Query: 443 RNGV 446
NG+
Sbjct: 371 ENGL 374
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD+ + L+ G+C G++D+A + REM R G G V Y+ IL + R
Sbjct: 551 PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTT-------RR 603
Query: 291 DSEAEKVLLDME--------------YNGVPRN---------------------VETFNV 315
SEA+++ L+M NG+ +N + TFN+
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I L K R+EDA+ LF + +G P+ T+ ++ ++L + + E D++ M+ +G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ + RL I +A + K+ + ++ T +L++
Sbjct: 724 TTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLIS 771
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 213 GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
G+ AE+LV++ + L+ GWC GKLDEAK + M L VA+N
Sbjct: 169 GHVVTAEQLVEEPQTRFPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVAFN 228
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+L R +D F L + ME G P N ++ LI L R ++A+++
Sbjct: 229 TLLAGFVADGRFEDAFELTGQ-------MEQRGCPPNAVSYTTLIQGLGARGRVDEAMRV 281
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M GC P+ T+ L+ + +A ++ +G E +D + G + Y+ F
Sbjct: 282 FVEMRRKGCAPDAVTYGTLVSTFCKAGKISQGYEFLDAISRDGLRVDAAVYHGFFVAHEK 341
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E++E+ + + E+M+ PD + Y++++ C +A +L++E G+
Sbjct: 342 KEQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGGL 395
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L R G + F+ ME G K + +V LC+ G + L+KD
Sbjct: 220 TYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 278
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ EI P+ ++L+ + +GKL EA L +EM G + YN ++D C
Sbjct: 279 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD---GYCM 335
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ RL SEA +L M N ++ TF LI C ++R +D +K+F + + G
Sbjct: 336 QN---RL-SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 391
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +L++ Q+ ++ +E+ M S G Y L LC ++E+A+ +F
Sbjct: 392 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 451
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E ++ + Y ++ C +V+ A LF GV+ Y V
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 503
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 9/273 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
+ R + VL F +++E + G + +L +++ C +A ++ + P
Sbjct: 88 IARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 146
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + LIKG ++GK+ EA L M G + V YN I V+ +CR D
Sbjct: 147 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSI---VNGICRSGDT---- 199
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A +L ME V +V T++ +I +LC+ + AI LF M G + T+ L
Sbjct: 200 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 259
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
++ L +A + +G ++ M S + L ++++A ++++M T G
Sbjct: 260 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 319
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+P+ TY+ LM +C NR+ +AN + D VRN
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 352
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 9/300 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ + + D +V+N T S ++ + R+G + L +ME + K D +
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME-ERNVKADVFT 220
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC +G A L K+ + + + L++G C GK ++ L ++M
Sbjct: 221 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 280
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ +N +LD K + + EA ++ +M G+ N+ T+N L+
Sbjct: 281 SREIVPNVITFNVLLDVFVKEGKLQ-------EANELYKEMITRGISPNIITYNTLMDGY 333
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C R +A + M C P+ TF LIK RV +G ++ + G
Sbjct: 334 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 393
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C +I+ A +F++M + G PD TY +L+ C + +++KA +F++
Sbjct: 394 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 453
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 9/227 (3%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
D +V NK T S I R + F + + G + + ++V+ C+
Sbjct: 347 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTYSILVQGFCQ 405
Query: 212 NGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+G AE+L ++ ++ + PD +L+ G C +GKL++A + ++ + +LG V
Sbjct: 406 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 465
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y I++ + K + +D + L + GV NV T+ V+IS LCK +A
Sbjct: 466 YTTIIEGMCKGGKVEDAWNL-------FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 518
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
L +M E G PN+ T+ LI++ + + ++I+ MKS G++
Sbjct: 519 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 565
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+E NG+ N+ T N++I+ C+ ++ A + ++ + G P+ TTF LIK L+ +
Sbjct: 104 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 163
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E ++DRM G Y + +C A+ + KM+ D TY
Sbjct: 164 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 223
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
++ C +D A +LF E G++ Y R L K
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 266
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 11/313 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K HD +V + + A+ ++ L + G L RM D + +
Sbjct: 94 GEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLL-RMIEDRSTRPNVVM 152
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++ + A L + A IFP+ LI G+C+ G+L EA L EM
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI 212
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
Y ++D + K + K EA+ +L M GV NV ++N L+
Sbjct: 213 LKNINPNVYTYTILMDALCKEGKVK-------EAKNLLAVMTKEGVKPNVVSYNTLMDGY 265
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C I ++A ++F+ M + G +PN ++ ++I L ++ RV E ++ +
Sbjct: 266 CLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNT 325
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C + RI A+ + ++M G D TY L+ C + +DKA ALF +
Sbjct: 326 VTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385
Query: 441 AVRNGVEVKPKEY 453
G++ P +Y
Sbjct: 386 MKERGIQ--PNKY 396
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +D L + G+ + M ++ G K + S +++ C G A+++
Sbjct: 222 TYTILMDALCKEGKVKEAKNLLAVMTKE-GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHT 280
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ +++I C ++DEA L RE+ TV Y+ ++D KL R
Sbjct: 281 MVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGR 340
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A +L +M + G P +V T+ L+ LCK + + A LF +M E G P
Sbjct: 341 I-------TSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N+ T+ LI L + R ++ + G I Y ++ LC +++A+++
Sbjct: 394 NKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMK 453
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
KM+ +G PD+ T+++++ ++ DKA L E +
Sbjct: 454 SKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I AG+ + G M + + ++++ LC+ G A+ L+
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILK-NINPNVYTYTILMDALCKEGKVKEAKNLLAV 245
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E + P+ + L+ G+C+ G++ AK++ M + G +YN ++D +LC+
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMID---RLCK 302
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K R+D EA +L ++ + + N T++ LI CK+ R A+ L M G
Sbjct: 303 SK---RVD-EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPA 358
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ L+ +L + + + + +MK G K Y + LC R + A +F
Sbjct: 359 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLF 418
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ + G + TY+++++ C +D+A A+ + NG
Sbjct: 419 QHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENG 460
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 64/146 (43%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ G+ ++ T N+LI+ C + + + + ++ + G PN T L+K L
Sbjct: 36 MQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGE 95
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + D++ + G+ + + Y L LC I A+ + ++ P+ Y+
Sbjct: 96 VKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNT 155
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
++ C V++A L+ E G+
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGI 181
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 138/293 (47%), Gaps = 9/293 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I L +GR + L F M ++ G + + + ++++ LC+ A K++
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + + + P + LI G+C +G +D+A + M T YN + + LC
Sbjct: 359 EMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYN---ELICGLC 415
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+K+ + A +L M + ++ T+N LI CK+ E A +L M E G
Sbjct: 416 KKRKVHK----AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P++ T+ V I +L + RV E + D +K+ G + Y + C + +I+ A S+
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E+M D P+S TY++L+ C ++ +A++L + + GV+ Y +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 173/419 (41%), Gaps = 48/419 (11%)
Query: 34 PTHYLNFLSKPFSSKPTSNPKTID-DPDQVIARSLSGELLENLEADPLPISQRLHLIFSH 92
P YL L KP+SS S P+ + D + V LS +LL L P Q+ H
Sbjct: 10 PGEYLLILLKPYSS-IASLPQILSLDSEPV---DLSAQLLSILSR---PNWQK-HPSLRK 61
Query: 93 VTP--TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
+ P TPS V S F+ + A+ FN W+ F H + S + R +
Sbjct: 62 LLPSLTPSHVSSLFAFNLDPQTALSFFN-WIALRPGFKHNVHSYSSMLNILIRAR----- 115
Query: 151 HDFLVDNKEVLGPKTLASCI---DRLVRAGRPTQVLGFFERMERDYGFK-----RDKDSL 202
L+ E + + SC D L VL F +M D FK R +++
Sbjct: 116 ---LLGVAEKIRISMIKSCCSIEDVLF-------VLEVFRKMNADGEFKFKPTLRCYNTI 165
Query: 203 RLVVEK--LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+ + K L + Y E L N+I P+ + ++ G+C G + EA+ A ++
Sbjct: 166 LMSLSKFLLIDEMKTVYLELL----NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV 221
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ G T Y + + CR K A +V L M G RN ++ LI L
Sbjct: 222 QAGLHPDTFTYTSL---ILGHCRNKGV----DNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C+ R +A+KLF M E C P T+ VLI +L + R E + + MK G
Sbjct: 275 CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNV 334
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + LC ++++A + +M G P TY+ L+ +C +D A + D
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
G +R++ S ++ LCE G + A KL D T + P + +LI G+ EA
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L EM G E Y ++D LC++ ++D EA K+L +M G+ +V T
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLID---GLCKEN---KMD-EARKMLSEMSEKGLIPSVVT 371
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI CK +DA ++ M C PN T+ LI L + +V + ++++M
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y + C + +E A + M +G PD TY + + C RV+
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491
Query: 433 KANALFDEAVRNGVEVKPKEY 453
+A LFD GV+ Y
Sbjct: 492 EAGTLFDSVKAKGVKANEVIY 512
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 121/306 (39%), Gaps = 59/306 (19%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL 238
P L FF + GFK + S Y+S L++ A + +KI
Sbjct: 81 PQTALSFFNWIALRPGFKHNVHS------------YSSMLNILIR--ARLLGVAEKIRIS 126
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGG---FELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+IK C + + R+M G F+ YN IL +SK F L E +
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSK-------FLLIDEMK 179
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKI-------------------------------- 323
V L++ N + N+ TFN +++ CKI
Sbjct: 180 TVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH 239
Query: 324 ---RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ ++A ++F M + GC NE ++ LI L +A R+ E ++ M
Sbjct: 240 CRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ Y + L G R +A+++F +MK G P+ TY +L+ C N++D+A + E
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 441 AVRNGV 446
G+
Sbjct: 360 MSEKGL 365
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 124/324 (38%), Gaps = 48/324 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L + GR + F+ ++ G K ++ +++ C+ G A L++ N+
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAK-GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK-------- 280
P+ ++LI+G C + K+ EA L +M G + V Y ++ + K
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Query: 281 --------------LCRKKDPFR------LDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+C + E + V+ M G+ ++ T+ VLI
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE----------------- 363
++ + A M + GC P+ +LIK+L R+ E
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYE 719
Query: 364 -GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ ++M G I Y + C ER+E+A + MK G +P + Y+ L+
Sbjct: 720 IALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 779
Query: 423 TKWCAHNRVDKANALFDEAVRNGV 446
C +A L D V NG+
Sbjct: 780 DCCCKLGVYAEAVRLVDAMVENGL 803
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 9/229 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD + I C +G+++EA L + G + V Y ++D K+ +
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+ L E++L D N T+NVLI LCK ++ ++A L +M G P
Sbjct: 528 AYSL---LERMLND----ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +LI + + ++ + M S GY Y FL +E+ V KM
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+G PD TY +L+ + +A V G KP Y V
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG--CKPSLYIV 687
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 115/307 (37%), Gaps = 61/307 (19%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G D+ + + ++ LC+ G A L A + ++ I LI G+C GK+D A
Sbjct: 469 GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVA 528
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L M + YN +++ LC++K EA ++ M GV V T
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIE---GLCKEKKM----KEASSLVAKMLTMGVKPTVVT 581
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +LI + K + A+K+F M G P+ T+ + + + + E D++I +M
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641
Query: 373 SAG-------YAIGKKDY---------YEFLTRLC------------------------- 391
G Y + Y ++FL +
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701
Query: 392 ------GIERI------EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
GI+ + E A+ +FEKM G D Y L+ +C R+++A L
Sbjct: 702 ETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVH 761
Query: 440 EAVRNGV 446
G+
Sbjct: 762 HMKERGM 768
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 135/376 (35%), Gaps = 57/376 (15%)
Query: 133 TLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTL-ASCIDRLVRAGRPTQVLGFFER 188
T S F D GR ++ + D V K V + + + ID + G+ ER
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDS-VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDG 247
M D + + +++E LC+ A LV K + P +LI DG
Sbjct: 535 MLNDACLP-NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCIL-------------DCVSKLCRKKDPFRLDSEA 294
D A ++ M G++ Y L D ++K+ ++ D
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM--NEEGILPDLVT 651
Query: 295 EKVLLD-----------------MEYNGVPRNVETFNVLISNLCKIRRS----------- 326
VL+D M G ++ ++LI NL R
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDS 711
Query: 327 -------EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
E A+KLF +M E GC + + + LI Q R+ E ++ MK G +
Sbjct: 712 VSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 771
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ Y L C + +A+ + + M +G P E+Y LL+ +KA A+F
Sbjct: 772 EDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFH 831
Query: 440 EAVRNGVEVKPKEYRV 455
+ G ++V
Sbjct: 832 GLLSCGYNYDEVAWKV 847
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A K+ M +G +V + LI+ C+ R E+A L + M E G P+E + L+
Sbjct: 721 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 780
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDG 410
+ E ++D M G + + Y+ L +CG+ E+A +VF + + G
Sbjct: 781 CCCKLGVYAEAVRLVDAMVENGL-LPLLESYKLL--VCGLYIEGSNEKAKAVFHGLLSCG 837
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+N D + +L+ + VD+ + L D G + P Y +
Sbjct: 838 YNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSL 882
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 128/309 (41%), Gaps = 29/309 (9%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD-NKEVLGPK--TLASCIDRL 173
FNH ++ T +F YF + + + D + N+E + P T ID
Sbjct: 602 FNHMVSLGYQPDVCTYT-AFLHAYFSQGM-LEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD 233
R G + F + M D G K + ++++ L E +K+T +EI D
Sbjct: 660 ARLGLTHRAFDFLKCM-VDTGCKPSLYIVSILIKNLSH-------ENRMKETRSEIGIDS 711
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
L + + A +L +M G + Y + ++ C+++ RL+ E
Sbjct: 712 VSNTL---------EYEIALKLFEKMVEHGCTIDVSIYGAL---IAGFCQQE---RLE-E 755
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A+ ++ M+ G+ + + +N L+ CK+ +A++L M E G P ++ +L+
Sbjct: 756 AQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVC 815
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
LY + + + S GY + + + L + +++ + + M+ G P
Sbjct: 816 GLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQP 875
Query: 414 DSETYDLLM 422
+ TY LL+
Sbjct: 876 NPLTYSLLI 884
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 15/285 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG----YASYAEK 220
T S + GR + L + RM ++ G + + + ++ LC G S ++K
Sbjct: 315 TFTSLMKGYFMGGRLCEALDLWNRMIQE-GSEPNTVAYNTLIHGLCSYGKMVEAVSVSQK 373
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ + N +FP++ LI G+ G L A + +M G V Y C++D
Sbjct: 374 MER---NGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDV--- 427
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LCR + + A ++ +M P N TFN I LC ++E A+K+ +M ++G
Sbjct: 428 LCRNS----MFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYG 483
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN TT+ ++ L+ A R E +++ ++ Y L+ C + A+
Sbjct: 484 CAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGAL 543
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ K+ G PDS TY+ ++ +C V A L D + G
Sbjct: 544 QIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKG 588
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 133/277 (48%), Gaps = 14/277 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L+ + + G + M+RD G + + + ++++ LC+N A KL+ + + +
Sbjct: 150 LDALLSENKFQMINGIYNNMKRD-GIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG 208
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD ++ C GK++EA+ L+ + + YN +++ + + ++ F
Sbjct: 209 CIPDAVSYTTVVSSMCRLGKVEEARELSMRI-----KSFVPVYNALINGFCREHKMEEVF 263
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L +E M G+ +V T++ +I+ L ++ E A+ + +M GC PN TF
Sbjct: 264 ELFNE-------MAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTF 316
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+K + R+ E ++ +RM G Y + LC ++ +A+SV +KM+
Sbjct: 317 TSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMER 376
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+G P+ TY L+ + + A+ ++++ + NG
Sbjct: 377 NGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNG 413
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 143/343 (41%), Gaps = 31/343 (9%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKT----LASCI 170
L F + + +F HT T + G +D I +L+ ++ G I
Sbjct: 57 LHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQ-YLLQLMKLEGISCNEDLFVIVI 115
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL-CENGYASYAEKLVKDTANEI 229
+ RAG Q L F R+ ++G K V++ L EN + +++ N +
Sbjct: 116 NAYRRAGLAEQALKTFYRI-GEFGCKPSVKIYNHVLDALLSENKF-----QMINGIYNNM 169
Query: 230 FPDD-----KICDLLIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCR 283
D ++L+K C + ++D A++L EM Y+G CI D VS
Sbjct: 170 KRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG----------CIPDAVSYTTV 219
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RL E L M + V +N LI+ C+ + E+ +LF M G P
Sbjct: 220 VSSMCRLGKVEEARELSMR---IKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDP 276
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +I +L + V ++ +M G + + + R+ +A+ ++
Sbjct: 277 DVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW 336
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M +G P++ Y+ L+ C++ ++ +A ++ + RNGV
Sbjct: 337 NRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGV 379
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 31/195 (15%)
Query: 284 KKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
K+ + D + + LL M+ G+ N + F ++I+ + +E A+K FYR+GE+GC
Sbjct: 81 KRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCK 140
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ + ++ +L + + + + MK G + Y L LC +R++ A +
Sbjct: 141 PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKL 200
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA--------------NAL----------- 437
+M G PD+ +Y +++ C +V++A NAL
Sbjct: 201 LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKME 260
Query: 438 -----FDEAVRNGVE 447
F+E G++
Sbjct: 261 EVFELFNEMAVEGID 275
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 19/326 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D ++++ T + +D + + G L +ME +
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++G S A+ L + + IFPD + +I G+C G+ +A++L +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V YN +++ K + F EAE++ +M G+ N T++ +I
Sbjct: 318 ERKISPDVVTYNALINAFVK----EGKFF---EAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY M GC PN TF LI A R+ +G E++ M G
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + + + A+ + ++M + G PD T D L+ C + ++ A +F
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 441 AVR-----------NGVEVKPKEYRV 455
+ NGVE + Y +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNI 516
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 10/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM D G + + + +V+ +C+ G A L++
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + I P+ I +I C DG+ +A+ L EM G YN + + C
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM---IVGFC 301
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
S+AE++L +M + +V T+N LI+ K + +A +L+ M G
Sbjct: 302 SSGRW----SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ +I + R+ + M M + G + + + CG +RI+ M +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M G D+ TY+ L+ + ++ A L E + +G+
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 139/326 (42%), Gaps = 29/326 (8%)
Query: 133 TLSFFTDYFGRRKDFKAI-HDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S D F ++ A H F + + P T + ID A R + M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGK 248
+ G D + ++ G + A L+++ ++ + PD CD L+ G C +GK
Sbjct: 422 -TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 249 LDEAKRLAREMYRG-----------GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L +A + + M + G E YN + +S L + EAE++
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL---ISGLINEGKFL----EAEEL 533
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M + G+ + T++ +I LCK R ++A ++F MG PN TF LI +
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG---IERIEQAMSVFEKMKTDGHNPD 414
A RV +G E+ M G Y +T +CG + I A+ +F++M + G PD
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITY---ITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 415 SETYDLLMTKWCAHNRVDKANALFDE 440
+ T ++T + + +A A+ ++
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G KR D + L+ E + E G LV DT + LI G+ + G L+ A
Sbjct: 407 GAKRIDDGMELLHE-MTETG-------LVADTTTY--------NTLIHGFYLVGDLNAAL 450
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME----YNGVPRN 309
L +EM G V + +LD + + KD + +K D++ +NGV +
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V+T+N+LIS L + +A +L+ M G P+ T+ +I L + +R+ E +M D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M S ++ + + C R++ + +F +M G ++ TY L+ +
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 430 RVDKANALFDEAVRNGV 446
++ A +F E + +GV
Sbjct: 631 NINGALDIFQEMISSGV 647
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVK---------DTA---NEIFPDDKICDLLIK 241
G D + +++ LC+NG A ++ K D + N + PD + ++LI
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G +GK EA+ L EM G T+ Y+ ++D LC++ RLD EA ++ M
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID---GLCKQS---RLD-EATQMFDSM 572
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
NV TF LI+ CK R +D ++LF MG G N T++ LI + +
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++ M S+G LT L E +++A+++ EK++
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 140/382 (36%), Gaps = 78/382 (20%)
Query: 146 DFKAIHDFLVDNKEVLGPKTLASCID------RLVRAGRPTQVLGFFERMERDYGFKRDK 199
+ K + D + ++L + L S +D +VR RP V+ +++MER + D
Sbjct: 56 EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDI 114
Query: 200 DSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA------ 252
S ++++ C +A K T + PD L+ G CV+ ++ EA
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174
Query: 253 -----------------KRLARE------------MYRGGFELGTVAYNCILDCVSKLCR 283
L RE M G + + Y I+D +C+
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD---GMCK 231
Query: 284 KKDPFR------------------------LDS--------EAEKVLLDMEYNGVPRNVE 311
K D +DS +A+ + +M+ G+ ++
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N +I C R DA +L M E P+ T+ LI + + + E +E+ D M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G Y + C R++ A +F M T G +P+ T++ L+ +C R+
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411
Query: 432 DKANALFDEAVRNGVEVKPKEY 453
D L E G+ Y
Sbjct: 412 DDGMELLHEMTETGLVADTTTY 433
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 19/326 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D ++++ T + +D + + G L +ME +
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++G S A+ L + + IFPD + +I G+C G+ +A++L +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V YN +++ K + F EAE++ +M G+ N T++ +I
Sbjct: 318 ERKISPDVVTYNALINAFVK----EGKFF---EAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY M GC PN TF LI A R+ +G E++ M G
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + + + A+ + ++M + G PD T D L+ C + ++ A +F
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 441 AVR-----------NGVEVKPKEYRV 455
+ NGVE + Y +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNI 516
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 10/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM D G + + + +V+ +C+ G A L++
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + I P+ I +I C DG+ +A+ L EM G YN + + C
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM---IVGFC 301
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
S+AE++L +M + +V T+N LI+ K + +A +L+ M G
Sbjct: 302 SSGRW----SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ +I + R+ + M M + G + + + CG +RI+ M +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M G D+ TY+ L+ + ++ A L E + +G+
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 139/326 (42%), Gaps = 29/326 (8%)
Query: 133 TLSFFTDYFGRRKDFKAI-HDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S D F ++ A H F + + P T + ID A R + M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGK 248
+ G D + ++ G + A L+++ ++ + PD CD L+ G C +GK
Sbjct: 422 -TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 249 LDEAKRLAREMYRG-----------GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L +A + + M + G E YN + +S L + EAE++
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL---ISGLINEGKFL----EAEEL 533
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M + G+ + T++ +I LCK R ++A ++F MG PN TF LI +
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG---IERIEQAMSVFEKMKTDGHNPD 414
A RV +G E+ M G Y +T +CG + I A+ +F++M + G PD
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITY---ITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 415 SETYDLLMTKWCAHNRVDKANALFDE 440
+ T ++T + + +A A+ ++
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G KR D + L+ E + E G LV DT + LI G+ + G L+ A
Sbjct: 407 GAKRIDDGMELLHE-MTETG-------LVADTTTY--------NTLIHGFYLVGDLNAAL 450
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME----YNGVPRN 309
L +EM G V + +LD + + KD + +K D++ +NGV +
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V+T+N+LIS L + +A +L+ M G P+ T+ +I L + +R+ E +M D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M S ++ + + C R++ + +F +M G ++ TY L+ +
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 430 RVDKANALFDEAVRNGV 446
++ A +F E + +GV
Sbjct: 631 NINGALDIFQEMISSGV 647
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVK---------DTA---NEIFPDDKICDLLIK 241
G D + +++ LC+NG A ++ K D + N + PD + ++LI
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G +GK EA+ L EM G T+ Y+ ++D LC++ RLD EA ++ M
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID---GLCKQS---RLD-EATQMFDSM 572
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
NV TF LI+ CK R +D ++LF MG G N T++ LI + +
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++ M S+G LT L E +++A+++ EK++
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 139/386 (36%), Gaps = 86/386 (22%)
Query: 146 DFKAIHDFLVDNKEVLGPKTLASCID------RLVRAGRPTQVLGFFERMERDYGFKRDK 199
+ K + D + ++L + L S +D +VR RP V+ +++MER + D
Sbjct: 56 EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDI 114
Query: 200 DSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
S ++++ C +A K T + PD + L+ G CV+ ++ EA L +
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174
Query: 259 MYRG-----------------------------------GFELGTVAYNCILDCVSKLCR 283
M+ G + + Y I+D +C+
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD---GMCK 231
Query: 284 KKDPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-- 340
K D A +L M E + + NV ++ +I +LCK R DA LF M E G
Sbjct: 232 KGDTV----SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287
Query: 341 ---------------------------------CHPNETTFLVLIKSLYQAARVGEGDEM 367
P+ T+ LI + + + E +E+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
D M G Y + C R++ A +F M T G +P+ T++ L+ +C
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEY 453
R+D L E G+ Y
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTY 433
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 44/314 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L + R + + + M+ + G ++++ LC+ G S KLV +
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLSRVTKLVDN 282
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
FP++ + LI G C+ GKLD+A L M V Y +++ + K R
Sbjct: 283 MFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D RL L+ ME G N ++VLIS L K ++E+A+ L+ +M E GC P
Sbjct: 343 AMDGARL-------LISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRP 395
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG-------YAIGKKDYYE----------- 385
N + +I L + + E E+++ M S+G Y+ K +++
Sbjct: 396 NIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVW 455
Query: 386 -----------------FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ LCG+ R+++AM V+ KM T G PD+ Y ++ C
Sbjct: 456 REMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGI 515
Query: 429 NRVDKANALFDEAV 442
+D A L+ E +
Sbjct: 516 GSMDAALKLYHEML 529
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 11/286 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERM---ERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
K+ S ++ ++ G + L F++ + + + S LV++ LC+ G+ A +
Sbjct: 149 KSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIE 208
Query: 221 LVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ + + PD L+ G C + ++DEA L EM G V YN ++D
Sbjct: 209 VFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID--- 265
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC+K D R+ K++ +M G N T+N LI LC + + A+ L RM
Sbjct: 266 GLCKKGDLSRVT----KLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
C PN+ T+ LI L + R +G ++ M+ GY + + Y ++ L + E+A
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEA 381
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M++++KM G P+ Y ++ C + ++A + + + +G
Sbjct: 382 MTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSG 427
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 10/219 (4%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ I +LI G +GK +EA L ++M G V Y+ ++D LCR+ P
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVID---GLCREGKP---- 413
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+EA+++L M +G NV T++ L+ K SE+AI+++ M E GC NE + VL
Sbjct: 414 NEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVL 473
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L RV E + +M + G Y + LCGI ++ A+ ++ +M
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 412 ---NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PD TY++L+ C V +A L + + G +
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCD 572
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 147/375 (39%), Gaps = 65/375 (17%)
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFL----VDNKEVLGPKTLASCIDRLVRAGRPT 180
+F D TLS + + DF ++ L ++N+ ++ ++ +A P
Sbjct: 71 GSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVII-ERSFIVVFRAYGKAHLPE 129
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY----ASYAEKLVKDTAN-EIFPDDKI 235
+ + F RM ++ KR S V+ + G + + +V N I P+
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+L+IK C G +D A E++RG E
Sbjct: 190 FNLVIKALCKLGFVDRAI----EVFRG------------------------------MPE 215
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
K L Y T+ L+ LCK R ++A+ L M GC P+ + VLI L
Sbjct: 216 KKCLPDGY--------TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + +++D M G + Y + LC ++++A+S+ E+M + P+
Sbjct: 268 CKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 416 ETYDLLMTKWCAHNR-VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIA--VKKGKKR 472
TY L+ R +D A L + ++ + YR++ I+ K+GK
Sbjct: 328 VTYGTLINGLVKQRRAMDGARLL--------ISMEERGYRLNQHIYSVLISGLFKEGKAE 379
Query: 473 E--TLPEKMARKRRR 485
E TL +KMA K R
Sbjct: 380 EAMTLWKKMAEKGCR 394
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 116/279 (41%), Gaps = 23/279 (8%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ ID L R G+P + M G + + +++ + G + A ++ ++
Sbjct: 401 SAVIDGLCREGKPNEAKEILNGMISS-GCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMD 459
Query: 227 NEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
++ C +LI G C G++ EA + +M G + TVAY+ ++ + +
Sbjct: 460 ETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMD 519
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+L E +L E P +V T+N+L+ LC + A+ L M + GC P+
Sbjct: 520 AALKLYHE---MLCQEEPKSQP-DVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDV 575
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T + +L + KS G+ E + RL +R+ A + E
Sbjct: 576 ITCNTFLNTLSE--------------KSDSCEEGRSFLEELVARLLKRQRVSGACKIVEV 621
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
M P + T+ +++ + C + K NA ++ RN
Sbjct: 622 MLGKYLAPKTSTWAMIVPEIC---KPKKINAAINKCWRN 657
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 19/326 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D ++++ T + +D + + G L +ME +
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++G S A+ L + + IFPD + +I G+C G+ +A++L +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V YN +++ K + F EAE++ +M G+ N T++ +I
Sbjct: 318 ERKISPDVVTYNALINAFVK----EGKFF---EAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY M GC PN TF LI A R+ +G E++ M G
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + + + A+ + ++M + G PD T D L+ C + ++ A +F
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 441 AVR-----------NGVEVKPKEYRV 455
+ NGVE + Y +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNI 516
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 10/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM D G + + + +V+ +C+ G A L++
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + I P+ I +I C DG+ +A+ L EM G YN + + C
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM---IVGFC 301
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
S+AE++L +M + +V T+N LI+ K + +A +L+ M G
Sbjct: 302 SSGRW----SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ +I + R+ + M M + G + + + CG +RI+ M +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M G D+ TY+ L+ + ++ A L E + +G+
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 139/326 (42%), Gaps = 29/326 (8%)
Query: 133 TLSFFTDYFGRRKDFKAI-HDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S D F ++ A H F + + P T + ID A R + M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGK 248
+ G D + ++ G + A L+++ ++ + PD CD L+ G C +GK
Sbjct: 422 -TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 249 LDEAKRLAREMYRG-----------GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L +A + + M + G E YN + +S L + EAE++
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL---ISGLINEGKFL----EAEEL 533
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M + G+ + T++ +I LCK R ++A ++F MG PN TF LI +
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG---IERIEQAMSVFEKMKTDGHNPD 414
A RV +G E+ M G Y +T +CG + I A+ +F++M + G PD
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITY---ITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 415 SETYDLLMTKWCAHNRVDKANALFDE 440
+ T ++T + + +A A+ ++
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G KR D + L+ E + E G LV DT + LI G+ + G L+ A
Sbjct: 407 GAKRIDDGMELLHE-MTETG-------LVADTTTY--------NTLIHGFYLVGDLNAAL 450
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME----YNGVPRN 309
L +EM G V + +LD + + KD + +K D++ +NGV +
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V+T+N+LIS L + +A +L+ M G P+ T+ +I L + +R+ E +M D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M S ++ + + C R++ + +F +M G ++ TY L+ +
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 430 RVDKANALFDEAVRNGV 446
++ A +F E + +GV
Sbjct: 631 NINGALDIFQEMISSGV 647
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVK---------DTA---NEIFPDDKICDLLIK 241
G D + +++ LC+NG A ++ K D + N + PD + ++LI
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G +GK EA+ L EM G T+ Y+ ++D LC++ RLD EA ++ M
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID---GLCKQS---RLD-EATQMFDSM 572
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
NV TF LI+ CK R +D ++LF MG G N T++ LI + +
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++ M S+G LT L E +++A+++ EK++
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 138/386 (35%), Gaps = 86/386 (22%)
Query: 146 DFKAIHDFLVDNKEVLGPKTLASCID------RLVRAGRPTQVLGFFERMERDYGFKRDK 199
+ K + D + ++L + L S +D +VR RP V+ +++MER + D
Sbjct: 56 EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDI 114
Query: 200 DSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
S ++++ C +A K T + PD L+ G CV+ ++ EA L +
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQ 174
Query: 259 MYRG-----------------------------------GFELGTVAYNCILDCVSKLCR 283
M+ G + + Y I+D +C+
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD---GMCK 231
Query: 284 KKDPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-- 340
K D A +L M E + + NV ++ +I +LCK R DA LF M E G
Sbjct: 232 KGDTV----SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287
Query: 341 ---------------------------------CHPNETTFLVLIKSLYQAARVGEGDEM 367
P+ T+ LI + + + E +E+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
D M G Y + C R++ A +F M T G +P+ T++ L+ +C
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEY 453
R+D L E G+ Y
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTY 433
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 43/298 (14%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEA 252
G+K D+ + ++++ C G A KL+++ N + PD + L+ G+C G A
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
M GG N I+D + R ++ L +E M+ G+ N+ T
Sbjct: 485 LEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNE-------MQTQGIFPNLFT 537
Query: 313 FNVLISNLCKIRRSEDAIKLF-----------------------------------YRMG 337
+N +I+ LCK R+SE A++LF RM
Sbjct: 538 YNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARML 597
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ G P+ + +LI L +R+ E + +M G K Y + C I +
Sbjct: 598 KIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMR 657
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+A ++F +M GH P TY L+ +C NR+D A+ L DE R G+ Y V
Sbjct: 658 KAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNV 715
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 34/289 (11%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT----------ANEIFP---- 231
F + YGF R D+ R VV L G L++D A E+FP
Sbjct: 111 FSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLE 170
Query: 232 -------DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ DLLIK + + L+ A + + + G EL T + N +L C+++ R+
Sbjct: 171 SPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRR 230
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE------DAIKLFYRMGE 338
+ L E M+ G P NV T+ ++++ CK E A ++ M
Sbjct: 231 EFLRSLFEE-------MKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMER 283
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P T+ I L + V + + + SA + Y + LC +++
Sbjct: 284 NGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDE 343
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
A+ V E+MK+ G +PD TY +L+ +C V+K L +E + +E
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNME 392
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 130/326 (39%), Gaps = 12/326 (3%)
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQ 181
A + + S F + D + H + V N P S + + G
Sbjct: 424 AGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVN 483
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLI 240
L FF M + G + ++++ C G A L+ + + IFP+ + +I
Sbjct: 484 ALEFFNMM-LEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVI 542
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
C + K + A L M + V Y+ ++D +K + L + K+
Sbjct: 543 NRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKI--- 599
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
GV ++ + +LI+ LC R +A LF +M E G P++ ++ +I +
Sbjct: 600 ----GVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGD 655
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + + + M G+ Y + C + RI+ A + ++MK G PD TY++
Sbjct: 656 MRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNV 715
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
L+ +DKA + +E NGV
Sbjct: 716 LIAAHRRRGNLDKALEMLNEMKENGV 741
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 9/267 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLL 239
Q E MER+ G + + LC GY A V+ + + C + +
Sbjct: 273 QATEILEEMERN-GESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAI 331
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
I G C G+LDEA ++ EM G Y+ + + C++ D + ++
Sbjct: 332 IHGLCKKGELDEALKVLEEMKSCGISPDVYTYSIL---IHGFCKQGDV----EKGLYLIE 384
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+M+Y+ + ++ +++ L LCK R S+ ++ +F +G G ++T + +LIK
Sbjct: 385 EMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQG 444
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+ ++++ M A ++ + C + A+ F M G P T +
Sbjct: 445 DLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCN 504
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
+++ C RV++A L +E G+
Sbjct: 505 VIIDAHCREGRVEEALNLMNEMQTQGI 531
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+A + EM R G V Y+ + LCR ++S + V + NG+ NV
Sbjct: 273 QATEILEEMERNGESPTVVTYSTY---IYGLCRVG---YVESALDFVRSLISANGLV-NV 325
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+N +I LCK ++A+K+ M G P+ T+ +LI + V +G +I+
Sbjct: 326 YCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEE 385
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
MK + Y LC + ++ +F + G+ D Y +L+ +C
Sbjct: 386 MKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGD 445
Query: 431 VDKANALFDEAVRNGVEVKPKEY 453
+D A+ L +E VRN + P +
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNF 468
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 20/268 (7%)
Query: 165 TLASC---IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
++A+C ID R GR + L M+ G + + V+ +LC+ + A +L
Sbjct: 499 SIATCNVIIDAHCREGRVEEALNLMNEMQTQ-GIFPNLFTYNAVINRLCKERKSERALEL 557
Query: 222 VKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV-- 278
+ P + LI G+ +A L M + G VAY +++ +
Sbjct: 558 FPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCH 617
Query: 279 -SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
S++C + F+ M NG+ + ++ +I+ C+I A LF M
Sbjct: 618 RSRMCEAYNLFK----------KMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEML 667
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ G P T+ L+ + R+ D +ID MK G Y + ++
Sbjct: 668 QRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLD 727
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+A+ + +MK +G PD TY +M +W
Sbjct: 728 KALEMLNEMKENGVLPDHMTY--MMLEW 753
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 144 RKDFKAIHDFLVDNKEVLGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
RK +A+ F + K + P + ++ ID + + L + RM + G D +
Sbjct: 549 RKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLK-IGVTPDMVA 607
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC A L K T N + PD +I G+C G + +A L EM
Sbjct: 608 YTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEML 667
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ G V Y ++D K+ R+D A+ ++ +M+ G+ +V T+NVLI+
Sbjct: 668 QRGHLPTVVTYTSLVDGYCKM------NRIDI-ADMLIDEMKRKGITPDVVTYNVLIAAH 720
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ + A+++ M E G P+ T+++L
Sbjct: 721 RRRGNLDKALEMLNEMKENGVLPDHMTYMML 751
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 19/326 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D ++++ T + +D + + G L +ME +
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++G S A+ L + + IFPD + +I G+C G+ +A++L +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V YN +++ K + F EAE++ +M G+ N T++ +I
Sbjct: 318 ERKISPDVVTYNALINAFVK----EGKFF---EAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY M GC PN TF LI A R+ +G E++ M G
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + + + A+ + ++M + G PD T D L+ C + ++ A +F
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 441 AVR-----------NGVEVKPKEYRV 455
+ NGVE + Y +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNI 516
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 10/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM D G + + + +V+ +C+ G A L++
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + I P+ I +I C DG+ +A+ L EM G YN + + C
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM---IVGFC 301
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
S+AE++L +M + +V T+N LI+ K + +A +L+ M G
Sbjct: 302 SSGRW----SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ +I + R+ + M M + G + + + CG +RI+ M +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M G D+ TY+ L+ + ++ A L E + +G+
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 139/326 (42%), Gaps = 29/326 (8%)
Query: 133 TLSFFTDYFGRRKDFKAI-HDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S D F ++ A H F + + P T + ID A R + M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGK 248
+ G D + ++ G + A L+++ ++ + PD CD L+ G C +GK
Sbjct: 422 -TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 249 LDEAKRLAREMYRG-----------GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L +A + + M + G E YN + +S L + EAE++
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL---ISGLINEGKFL----EAEEL 533
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M + G+ + T++ +I LCK R ++A ++F MG PN TF LI +
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG---IERIEQAMSVFEKMKTDGHNPD 414
A RV +G E+ M G Y +T +CG + I A+ +F++M + G PD
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITY---ITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 415 SETYDLLMTKWCAHNRVDKANALFDE 440
+ T ++T + + +A A+ ++
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G KR D + L+ E + E G LV DT + LI G+ + G L+ A
Sbjct: 407 GAKRIDDGMELLHE-MTETG-------LVADTTTY--------NTLIHGFYLVGDLNAAL 450
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME----YNGVPRN 309
L +EM G V + +LD + + KD + +K D++ +NGV +
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V+T+N+LIS L + +A +L+ M G P+ T+ +I L + +R+ E +M D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M S ++ + + C R++ + +F +M G ++ TY L+ +
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 430 RVDKANALFDEAVRNGV 446
++ A +F E + +GV
Sbjct: 631 NINGALDIFQEMISSGV 647
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVK---------DTA---NEIFPDDKICDLLIK 241
G D + +++ LC+NG A ++ K D + N + PD + ++LI
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G +GK EA+ L EM G T+ Y+ ++D LC++ RLD EA ++ M
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID---GLCKQS---RLD-EATQMFDSM 572
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
NV TF LI+ CK R +D ++LF MG G N T++ LI + +
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++ M S+G LT L E +++A+++ EK++
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+++ R+ R T+ C C SKL PF L + + L G+ +V T
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSC-SKL-----PFALSTFGKLTKL-----GLHPDVVT 151
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN L+ LC R +A+ LF++M E C PN TF L+ L + R+ E ++DRM
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNRV 431
G + Y + +C A+++ KM+ H P+ Y ++ C R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 432 DKANALFDEAVRNGV 446
A LF E G+
Sbjct: 272 SDAQNLFTEMQEKGI 286
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 139/386 (36%), Gaps = 86/386 (22%)
Query: 146 DFKAIHDFLVDNKEVLGPKTLASCID------RLVRAGRPTQVLGFFERMERDYGFKRDK 199
+ K + D + ++L + L S +D +VR RP V+ +++MER + D
Sbjct: 56 EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDI 114
Query: 200 DSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
S ++++ C +A K T + PD + L+ G CV+ ++ EA L +
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174
Query: 259 MYRG-----------------------------------GFELGTVAYNCILDCVSKLCR 283
M+ G + + Y I+D +C+
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD---GMCK 231
Query: 284 KKDPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-- 340
K D A +L M E + + NV ++ +I +LCK R DA LF M E G
Sbjct: 232 KGDTV----SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287
Query: 341 ---------------------------------CHPNETTFLVLIKSLYQAARVGEGDEM 367
P+ T+ LI + + + E +E+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
D M G Y + C R++ A +F M T G +P+ T++ L+ +C
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEY 453
R+D L E G+ Y
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTY 433
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 9/282 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ I+ G +VL + M+ G K + + ++ LC++G AE+++++
Sbjct: 14 STVINGYCLGGELQKVLKLIQEMQMK-GLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N+ I PD + LI G+C G + A +L EM + +AY + + LCR
Sbjct: 73 NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAV---ICGLCRCG 129
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
EA+KV M GV + T+ LI CK E A L +M + G PN
Sbjct: 130 KMM----EADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNV 185
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ L L + +V +E++ M G + Y + LC I QA+ + E+
Sbjct: 186 VTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M+ G PD+ T+ LM +C + KA+ L E + G++
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQ 287
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 7/241 (2%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +I G+C+ G+L + +L +EM G + YN I + LC+ ++
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSI---ILLLCKSG---KV 61
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D +AE+VL +M G+ + + LI CK+ + A KLF M + P+ +
Sbjct: 62 D-DAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L + ++ E D++ ++M S G + Y + C +E+A S+ +M G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
P+ TY L C +VD AN L E G+++ Y L K +++
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 471 K 471
K
Sbjct: 241 K 241
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 12/314 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
ID + G F+ ME+ D + V+ LC G A+K+ K +
Sbjct: 87 IDGFCKLGNIQAAYKLFDEMEKQR-IVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD+ LI G+C G++++A L +M + G V Y + D + KL
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKL------G 199
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D+ A ++L +M G+ N+ T+N L++ LCK A+KL M G +P+ TF
Sbjct: 200 QVDT-ANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITF 258
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + + + E++ M G + + C +E + M
Sbjct: 259 TTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLE 318
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
G P++ TY+ LM ++C N + ++ GV Y + +K +
Sbjct: 319 KGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI---LIKGHCKARN 375
Query: 469 GKKRETLPEKMARK 482
K+ L ++MA K
Sbjct: 376 MKEAWFLHKEMAEK 389
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 129/299 (43%), Gaps = 13/299 (4%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
++H+ +V + T + D L + G+ M G + + + +V
Sbjct: 171 SLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEM-CGKGLQLNICTYNSLVNG 229
Query: 209 LCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC++G A KL+++ ++PD L+ +C G++ +A L REM G +
Sbjct: 230 LCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289
Query: 268 TVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+ +N +++ C+S + + E++L M G+ N T+N L+ C
Sbjct: 290 VITFNVLMNGFCMSGMLE---------DGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNN 340
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+++ M G P+ T+ +LIK +A + E + M G+ + Y
Sbjct: 341 MRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ ++I +A +FE+M+ +G D+E Y+L + ++ A L DEA+ N
Sbjct: 401 IIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIEN 459
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 123/328 (37%), Gaps = 46/328 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L R G+ + F +M G + D+ + +++ C++G A L
Sbjct: 122 ICGLCRCGKMMEADKVFNKM-FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ L G C G++D A L EM G +L YN + V+ LC+ +
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSL---VNGLCKSGNI- 236
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A K++ +ME G+ + TF L+ CK A +L M + G P TF
Sbjct: 237 ---RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITF 293
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VL+ + + +G+ ++ M G Y + + C + +++ M
Sbjct: 294 NVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCA 353
Query: 409 DGHNPDSETYDLLM----------TKWCAHNRV-------------------------DK 433
G PDS TY++L+ W H + +
Sbjct: 354 RGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISE 413
Query: 434 ANALFDEAVRNGVEVKPKEYR--VDPRY 459
A LF+E R G+ + Y VD Y
Sbjct: 414 ARELFEEMRREGMAADAEIYNLFVDISY 441
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 68/147 (46%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M++ G +V +++ +I+ C + +KL M G PN T+ +I L ++ +
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + + ++ M + G Y + C + I+ A +F++M+ PD Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
++ C ++ +A+ +F++ GVE
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVE 147
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 16/284 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ + ++ D ++ V T + ++ L +A + + E M D G D +
Sbjct: 195 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM-VDKGVTPDVIT 253
Query: 202 LRLVVEKLCENGYASYAEKLVKDTA------NEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
++V+ C+ A +L+ A N + PD ++LI G C G ++A L
Sbjct: 254 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN-GVPRNVETFN 314
EM + + + ++D LC+ EA + +LD+ N GVP NV T+N
Sbjct: 314 FEEMVAKNLQPDVMTFGALID---GLCKAGQV-----EAARDILDLMGNLGVPPNVVTYN 365
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L+ LCK R E+A + M GC P+ T+ L+ +L +A+R + +++ +KS
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
G+ Y + L + EQA++V E+M GH PDS T+
Sbjct: 426 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 147/368 (39%), Gaps = 70/368 (19%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV------EKLCENGYASYAEKL-- 221
I+ L + GR + + M R + D L ++ + LC+ + A +L
Sbjct: 114 INGLCKVGRIDEARELIQEMTR-----KSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 168
Query: 222 -VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
++D + + PD LI G C G++DEA + +M GG+ + YN + V+
Sbjct: 169 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL---VNG 225
Query: 281 LCRKK----------------------------DPF----RLDSEAEKVLLDMEYNGVPR 308
LC+ D F R+D EA ++L M G
Sbjct: 226 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD-EALELLHGMASRGCTP 284
Query: 309 NV-----ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
NV TFN+LI+ CK E A LF M P+ TF LI L +A +V
Sbjct: 285 NVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 344
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+++D M + G Y + LC RIE+A E+M + G PDS TY L+
Sbjct: 345 ARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVY 404
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV----KKGKKRE--TLPE 477
C +R D A L E K + DP + I V K GK + T+ E
Sbjct: 405 ALCRASRTDDALQLVSEL---------KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 455
Query: 478 KMARKRRR 485
+M K +
Sbjct: 456 EMVGKGHQ 463
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 10/273 (3%)
Query: 170 IDRLVRAGRPTQVLGFFE-RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
+ L RAG + L F M RD G + ++ LC++ +L ++
Sbjct: 8 LQSLCRAGDTARALEIFRGEMARD-GVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66
Query: 229 IF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
PD + LI C G L+EA+RL +M G V Y+ +++ + K+ R +
Sbjct: 67 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF--YRMGEWGCHPNE 345
L E + D V N+ T+N + LCK + +A +L R G P+
Sbjct: 127 RELIQEMTRKSCD-----VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
TF LI L + ++ E + D M + GY Y + LC +++E+A ++ E
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
M G PD TY +L+ +C +RVD+A L
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELL 274
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 128/287 (44%), Gaps = 14/287 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L + G+ + F+ M G+ + + +V LC+ A +++
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAG-GYVPNVITYNALVNGLCKADKMERAHAMIES 241
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT-----VAYNCILDCV 278
++ + PD +L+ +C ++DEA L M G V +N + +
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL---I 298
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
+ C+ + F +A + +M + +V TF LI LCK + E A + MG
Sbjct: 299 AGACKAGN-FE---QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 354
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G PN T+ L+ L ++ R+ E + ++ M S+G Y + LC R +
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 414
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A+ + ++K+ G +PD+ TY++L+ + ++A + +E V G
Sbjct: 415 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG 461
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 310 VETFNVLISNLCKIRRSEDAIKLF-YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V +N+++ +LC+ + A+++F M G P T+ +I L ++ +G G E+
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ + G+ Y + LC +E+A + M + G P+ TY +L+ C
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 429 NRVDKANALFDEAVRNGVEVKPK 451
R+D+A L E R +V P
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPN 143
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 159/351 (45%), Gaps = 12/351 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+ +LV L+ + ++ LG W + H E D G+ K + +
Sbjct: 77 SQNLVDVLLHRFKDDWKSALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALME 136
Query: 156 DNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+ ++ ++ T+A + RL AG + F+ + ++ +++ +S+ L+++ LC+
Sbjct: 137 EMRQGNLVRLSTVAKAMRRLAGAGEWEDAVRVFDDL-GNFELEKNTESMNLLLDTLCKER 195
Query: 214 YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
A + + I P+ ++ I GWC ++DEA+ +EM G ++Y+
Sbjct: 196 KVEQARAIFLELKPHISPNTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYST 255
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
I + CR+ + FR + ++L DM+ G NV T+ ++ +L K+ + E+A+++
Sbjct: 256 I---IQSYCRQSN-FR---KVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIA 308
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID-RMKSAGYAIGKKDYYEFLTRLCG 392
RM GC P+ + LI +L +A ++ E + + M G Y + C
Sbjct: 309 ERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCH 368
Query: 393 IERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ ++A+++ +++ PD +TY ++ ++D + D+ V
Sbjct: 369 HSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMV 419
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 25/331 (7%)
Query: 126 NFSHTDETLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQV 182
N T T S D F R +D K + D +V TL + ID RA R +
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL-I 238
Query: 183 LGF------------FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEI 229
GF F+ M + G D + ++ LCENG A ++ K +++
Sbjct: 239 HGFCQVGNVNVAQDLFQEMISN-GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
D C+++I G C K+DEA L + G E V YN + + ++ + R
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNIL---IGVFVKEGNFLR 354
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
AE + L+M G+ + T+N ++ CK R E+A ++ M GC P+ TF
Sbjct: 355 ----AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFS 410
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LIK +A RV +G E+ M G Y + C + + A +FE+M +
Sbjct: 411 TLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSS 470
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
G PD+ T+ ++ C + K + ++
Sbjct: 471 GVCPDTITFRSMLAGLCTKAELQKGLTMLED 501
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 120/248 (48%), Gaps = 14/248 (5%)
Query: 203 RLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
R ++ C+ G + A+ L ++ +N + PD C+ L+ G C +GKL++A + + +
Sbjct: 235 RHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK 294
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
+L T N I ++ +C+ ++D EA + + NGV +V T+N+LI
Sbjct: 295 SKMDLDTATCNII---INGMCKGN---KVD-EAWDLFNSLPVNGVETDVVTYNILIGVFV 347
Query: 322 K---IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
K R+ED ++ M G P+ T+ ++ + R+ E +M+D M S G +
Sbjct: 348 KEGNFLRAED---IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSP 404
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ + C R++ + +F +M G D+ TY+ L+ +C ++ A +F
Sbjct: 405 DVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIF 464
Query: 439 DEAVRNGV 446
+E V +GV
Sbjct: 465 EEMVSSGV 472
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 20/326 (6%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR A+ D +V+ T + ++ + + G L +M+ K +
Sbjct: 24 GRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQ-IKANVVI 82
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+V++LC++G A+ + + + IFP+ + +I G+C GK +A++L R+M
Sbjct: 83 YSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMI 142
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ V ++ +++ K + S AE++ +M + T++ +I
Sbjct: 143 ERNIDPDVVTFSALINAFVKEGKV-------SGAEELYREMLRRNIFPTTITYSSMIDGF 195
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR-----------VGEGDEMID 369
CK R EDA +F M GC P+ T LI +A R V ++
Sbjct: 196 CKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQ 255
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M S G + L LC ++E+A+ +F+ + + D+ T ++++ C N
Sbjct: 256 EMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGN 315
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRV 455
+VD+A LF+ NGVE Y +
Sbjct: 316 KVDEAWDLFNSLPVNGVETDVVTYNI 341
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 39/247 (15%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL---------CRKKDPFR 289
L+ G C +G++ +A L M G + V Y I++ + KL RK D +
Sbjct: 16 LMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQ 75
Query: 290 LDS-------------------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+ + +A+ + +M G+ NV T+N +I C + DA
Sbjct: 76 IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAE 135
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+L M E P+ TF LI + + +V +E+ M Y +
Sbjct: 136 QLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGF 195
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR-----------VDKANALFD 439
C R+E A +F+ M + G +PD T + L+ C R V+ A LF
Sbjct: 196 CKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQ 255
Query: 440 EAVRNGV 446
E + NGV
Sbjct: 256 EMISNGV 262
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G P NV TF L++ LC+ R A+ L RM E G P+ T+ ++ + +
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
M+ +M + Y + RLC +A ++F +M G P+ TY+
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
++ +C++ + A L + + ++
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNID 147
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
Y E L K I P + ++ G+C +L+EA+++ M G V ++ ++
Sbjct: 359 YLEMLCKG----IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 414
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
K R D L SE M G+ + T+N LI CK+ A +F M
Sbjct: 415 GYCKAGRVDDGLELFSE-------MCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEM 467
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
G P+ TF ++ L A + +G M++ ++ +
Sbjct: 468 VSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 191/470 (40%), Gaps = 64/470 (13%)
Query: 23 SPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQV-----IARSLSGELLEN--- 74
S +T + RF+ T + F K + + +QV +A+++S L+ +
Sbjct: 26 SSSATVWVRFNMTIRIINRQSRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQL 85
Query: 75 -----LEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSH 129
L+ L +SQ +V+ LN AG F W + ++ H
Sbjct: 86 VLDSALDQSGLRVSQ-------------EVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEH 132
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFE 187
+ + + + +K + D + + K++L +T + + RA + + + F
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDG 247
ME+ Y + + ++ LC++ A+++ ++ + PD K +L++GW +
Sbjct: 193 VMEK-YDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEP 251
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSK---------LCRKKDPF---------- 288
L +A+ + REM G V Y+ ++D + K + R DP
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 289 ----------RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
RL+ EA L+ME +G+ +V FN LI CK R ++ ++ M
Sbjct: 312 VLVHTYGTENRLE-EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM-KSAGYAIGKKDYYEFLTRL-CGIERI 396
G PN + ++++ L + GE DE D K D Y + ++ C + +
Sbjct: 371 KGVTPNSKSCNIILRHLIER---GEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEM 427
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E A V++ M+ G P T+ +L+ C KA L +E + G+
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 19/241 (7%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++++ + K+DEA M + VA+N +L S LC+ K+ +A++V
Sbjct: 173 IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLL---SALCKSKNV----RKAQEV 225
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M P + +T+++L+ K A ++F M + GCHP+ T+ +++ L +
Sbjct: 226 FENMRDRFTP-DSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKD--YYEFLTRLCGIE-RIEQAMSVFEKMKTDGHNPD 414
A RV DE + ++S +I K Y L G E R+E+A+ F +M+ G D
Sbjct: 285 AGRV---DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 341
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
++ L+ +C NR+ + E GV K + R+L +++G+K E
Sbjct: 342 VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHL-----IERGEKDEA 396
Query: 475 L 475
Sbjct: 397 F 397
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKI 235
R + + F MER G K D ++ C+ +++K+ ++ + P+ K
Sbjct: 321 NRLEEAVDTFLEMERS-GMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 379
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C+++++ G+ DEA + R+M + E Y + + C KK+ A+
Sbjct: 380 CNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMV---IKMFCEKKEM----ETAD 431
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
KV M GV ++ TF+VLI+ LC+ R ++ A L M E G P+ TF
Sbjct: 432 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 137/314 (43%), Gaps = 44/314 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L + R + + + M+ + G ++++ LC+ G + KLV +
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDN 282
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P++ + LI G C+ GKLD+A L M V Y +++ + K R
Sbjct: 283 MFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D RL L ME G N ++VLIS L K ++E+A+ L+ +M E GC P
Sbjct: 343 ATDAVRL-------LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 395
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG-------YAIGKKDYYE----------- 385
N + VL+ L + + E E+++RM ++G Y+ K +++
Sbjct: 396 NIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVW 455
Query: 386 -----------------FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ LCG+ R+++AM V+ KM T G PD+ Y ++ C
Sbjct: 456 KEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGI 515
Query: 429 NRVDKANALFDEAV 442
+D A L+ E +
Sbjct: 516 GSMDAALKLYHEML 529
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 11/286 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERM---ERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
K+ S ++ ++ G + L F++ + + + S LV++ LC+ + A +
Sbjct: 149 KSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIE 208
Query: 221 LVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ + + PD L+ G C + ++DEA L EM G V YN ++D
Sbjct: 209 VFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID--- 265
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC+K D R+ K++ +M G N T+N LI LC + + A+ L RM
Sbjct: 266 GLCKKGDLTRV----TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
C PN+ T+ LI L + R + ++ M+ GY + + Y ++ L + E+A
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEA 381
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
MS++ KM G P+ Y +L+ C + ++A + + + +G
Sbjct: 382 MSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 17/333 (5%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLG----PKTLASCIDRLVRAGR 178
Q+ S + + D ++ D + LVDN + G T + I L G+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTK-LVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICD 237
+ + ERM D + ++ L + A+ A +L+ + + I
Sbjct: 308 LDKAVSLLERMVSSKCIPNDV-TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI G +GK +EA L R+M G + V Y+ ++D LCR+ P +EA+++
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD---GLCREGKP----NEAKEI 419
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L M +G N T++ L+ K E+A++++ M + GC N+ + VLI L
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD---GHNPD 414
RV E + +M + G Y + LCGI ++ A+ ++ +M PD
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY++L+ C + +A L + + G +
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 139/369 (37%), Gaps = 59/369 (15%)
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFL----VDNKEVLGPKTLASCIDRLVRAGRPT 180
+F D TLS + + DF ++ L ++N+ ++ ++ +A P
Sbjct: 71 GSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVII-ERSFIVVFRAYGKAHLPD 129
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY----ASYAEKLVKDTAN-EIFPDDKI 235
+ + F RM ++ KR S V+ + G + + +V N I P+
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+L+IK C KL R A E++RG E RK P
Sbjct: 190 FNLVIKALC---KLRFVDR-AIEVFRGMPE-----------------RKCLP-------- 220
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+ T+ L+ LCK R ++A+ L M GC P+ + VLI L
Sbjct: 221 -------------DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + +++D M G + Y + LC ++++A+S+ E+M + P+
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE-- 473
TY L+ R A L G + Y V L K+GK E
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL-----FKEGKAEEAM 382
Query: 474 TLPEKMARK 482
+L KMA K
Sbjct: 383 SLWRKMAEK 391
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 23/276 (8%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D L R G+P + RM G + + +++ + G A ++ K+
Sbjct: 404 VDGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+K C +LI G C G++ EA + +M G + TVAY+ I+ + +
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAAL 522
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L E +L E P +V T+N+L+ LC + A+ L M + GC P+ T
Sbjct: 523 KLYHE---MLCQEEPKSQP-DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+ +L + KS G+ E + RL +R+ A ++ E M
Sbjct: 579 NTFLNTLSE--------------KSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLG 624
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
P + T+ +++ + C + K NA D+ RN
Sbjct: 625 KYLAPKTSTWAMIVREIC---KPKKINAAIDKCWRN 657
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 9/282 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L R G + +G M R D S ++ LC+ A L+ + A FP
Sbjct: 8 LCRNGGVFEAMGLIREMGRK-SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFP 66
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ C L+ G C DG++DEA L M + GF+ V Y + +S C + R
Sbjct: 67 NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL---ISGFCNNGNLDR-- 121
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+++ +M G+ NV T++ L+ LC++ + ++A + M E G HP+ T+ L
Sbjct: 122 --GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L + R ++++ M G Y L+ LC + A + M G
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
D TY+ LM C +VD+A LF+ N ++P +
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 281
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 15/281 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + + L R G+ + M ++G D + +++ LC++G A++A L+
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMA-EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 198
Query: 224 --DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ E P + ++L+ G C +G + +A ++ R M G + V YN ++ L
Sbjct: 199 MVEKGEE--PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLM---KGL 253
Query: 282 CRKKDPFRLDSEAEKVLLDM--EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
C D ++D EA K+ M N + NV TFN+LI LCK R A+K+ +M +
Sbjct: 254 C---DKGKVD-EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G N T+ +L+ +A ++ E E+ ++ G+ Y + C + + A
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 369
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+F +M+T G NP Y+ LM C +++A +LF E
Sbjct: 370 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 410
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 107/250 (42%), Gaps = 18/250 (7%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++++KG C +G + EA L REM R V+YN + ++ LC+ K EA
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTL---INGLCKAKKL----KEAVG 54
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+LL+ME G N T L+ LCK R ++A++L M + G + + LI
Sbjct: 55 LLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFC 114
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ G E+ D M G + Y + LC + + ++A +V M G +PD
Sbjct: 115 NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVV 174
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP-----------IA 465
TY L+ C R A L + V G E Y V L K +
Sbjct: 175 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234
Query: 466 VKKGKKRETL 475
++KGKK + +
Sbjct: 235 IEKGKKADVV 244
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 123/280 (43%), Gaps = 10/280 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + + +V LC G A ++ A I PD LI G C DG+ A
Sbjct: 133 GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHA 192
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L M G E V YN +L S LC++ L +A K+L M G +V T
Sbjct: 193 MDLLNLMVEKGEEPSNVTYNVLL---SGLCKEG----LVIDAFKILRMMIEKGKKADVVT 245
Query: 313 FNVLISNLCKIRRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+N L+ LC + ++A+KLF M E PN TF +LI L + R+ + ++ +
Sbjct: 246 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRK 305
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G Y L +I++AM +++++ G P+S TY +L+ +C
Sbjct: 306 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 365
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
++ A LF E +G+ +Y L K ++++ K
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 31/266 (11%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK---DTANEIFPDDKICDLLIKGWC 244
RM + G K D + +++ LC+ G A KL D N + P+ ++LI G C
Sbjct: 232 RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC 291
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-----------DSE 293
+G+L +A ++ R+M + G V YN +L K + K+ L +S
Sbjct: 292 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 351
Query: 294 AEKVLLD-----------------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+L+D M +G+ + +N L+++LCK E A LF M
Sbjct: 352 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 411
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
G C P+ +F +I +A E+ +M G + + RL + +
Sbjct: 412 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGEL 471
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLM 422
++A S E+M G PD+ YD L+
Sbjct: 472 DEAKSALERMVASGFTPDALVYDSLL 497
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 9/251 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR IH +V T + ++AG+ + + ++++ D GF + +
Sbjct: 294 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV-LDLGFVPNSFT 352
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++++ C+ + A+ L + + + P + L+ C +G L++AK L +EM
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
E +++N ++D K F+ E + +++M G+ + TF+ LI+ L
Sbjct: 413 NANCEPDIISFNTMIDGT----LKAGDFQFVKELQMKMVEM---GLRPDALTFSTLINRL 465
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K+ ++A RM G P+ + L+K L E ++ +M + G + +
Sbjct: 466 SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDR 525
Query: 381 KDYYEFLTRLC 391
K LT LC
Sbjct: 526 KIVSTILTCLC 536
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 15/278 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D L +AGR + ERM + G D + V LC++G A ++++ +
Sbjct: 194 MDGLCKAGRLQEAEQLLERM-KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSH 252
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKDP 287
P+ + ++ G C GK+D A + +M G L V Y+ ++D + KL R +
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ-- 310
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
EA V+ M G +V T++ L++ LCK + E+A++ M GC PN T
Sbjct: 311 -----EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVT 365
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK-----KDYYEFLTRLCGIERIEQAMSV 402
+ L+ L R+ E + M++ M S G Y + LC RI+ A+
Sbjct: 366 YCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKF 425
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
F++M++ G +PD +Y ++ R +A + E
Sbjct: 426 FQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSE 463
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 17/326 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERME-RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T + ++ + GRP E M RD + + S ++E LC+ AE+LV+
Sbjct: 12 TFNALVNGFSKQGRPGDCERLLETMAARD--IQPNVVSYNGLLEGLCKLERWHEAEELVR 69
Query: 224 DT---ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
D PD L+ G+C GK++E++ L +E+ G + Y + V+
Sbjct: 70 DMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKV---VAS 126
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+ E+++ G + TFN LIS C+ + E A L +M G
Sbjct: 127 LCKSARLGEALELLEEMI----RAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASG 182
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
+ T+ L+ L +A R+ E +++++RMK++G A Y F+ LC ++ A
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAH 242
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE-AVRNGVEVKPKEYRVDPRY 459
V E+M+ H+P+ TY+ ++ C ++D A + ++ A +G + Y
Sbjct: 243 QVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302
Query: 460 LKKPIAVKKGKKRETLPEKMARKRRR 485
L K + + ++ ++ E MAR R
Sbjct: 303 LCK---LGRTQEARSVMEAMARAGCR 325
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 125/300 (41%), Gaps = 31/300 (10%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G K D + +++ LC+ G AE+L++ A+ PD + G C GK+ +A
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDA 241
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ +M + V YN ILD LC+ ++D+ E + +G NV
Sbjct: 242 HQVLEQMRDSHHDPNVVTYNTILD---GLCKSG---KIDTALEMMEQMASSDGCGLNVVG 295
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ ++ LCK+ R+++A + M GC P+ T+ L+ L +A ++ E E + M
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN-----PDSETYDLLMTKWCA 427
G Y + LC R+ +A + E+M + G P TY+ L+ C
Sbjct: 356 MEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCK 415
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLK 487
R+D A F G DP G T+ E +AR R L+
Sbjct: 416 AGRIDDALKFFQRMRSQG---------CDP----------DGVSYSTIVEGLARSGRALQ 456
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 8/218 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ LI G C + L+ A L ++M G + V YN ++D LC+ RL EAE+
Sbjct: 156 NTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMD---GLCKAG---RLQ-EAEQ 208
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M+ +G +V ++ + LCK + DA ++ +M + PN T+ ++ L
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLC 268
Query: 357 QAARVGEGDEMIDRMKSA-GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ ++ EM+++M S+ G + Y + LC + R ++A SV E M G PD
Sbjct: 269 KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDV 328
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY L+ C ++++A E G + Y
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L ++G+ L E+M G + VV+ LC+ G A +++ A
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD L+ G C GK++EA REM G + V Y C L V LC
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY-CSL--VHGLC---SCG 377
Query: 289 RLDSEAEKVLLDMEYNG-----VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RL +EAE+++ +M G P +V T+N LI LCK R +DA+K F RM GC P
Sbjct: 378 RL-AEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ ++ +++ L ++ R + + ++ ++
Sbjct: 437 DGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ + L+ G+ G+ + +RL M + V+YN +L+ + KL R
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH----- 62
Query: 291 DSEAEKVLLDMEYNG---VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
EAE+++ DM G P V T++ L+S CK + E++ +L + G P+
Sbjct: 63 --EAEELVRDMISRGGRSTPDMV-TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ ++ SL ++AR+GE E+++ M AG + ++ C + +E A S+ +KM
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G D TY+ LM C R+ +A L + +G
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGC 218
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M R G +V +N +++ SK R D E++L M + NV ++N L+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGD-------CERLLETMAARDIQPNVVSYNGLLE 53
Query: 319 NLCKIRRSEDAIKLFYRMGEWG--CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
LCK+ R +A +L M G P+ T+ L+ +A +V E E++ + S G
Sbjct: 54 GLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGL 113
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + + LC R+ +A+ + E+M G P T++ L++ C ++ A++
Sbjct: 114 RPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADS 173
Query: 437 LFDEAVRNGVEVKPKEY 453
L + +GV+ Y
Sbjct: 174 LLQKMAASGVKADVVTY 190
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 16/302 (5%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
++A+HD P+ ID L+R V M +D G + + + L+V
Sbjct: 120 YRAVHDL--GCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKD-GVQPNVFTYNLLV 176
Query: 207 EKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
LC+N A K++ + A + P DD ++ C G++DEA E+
Sbjct: 177 RALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEAT----EVLSAAPP 232
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+ +YN + + LCR+ FR+ E V+ DM G+ NV T+ +++ CK
Sbjct: 233 VAA-SYNAV---ILALCRE---FRMQ-EVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGE 284
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
A + RM GC PN TF L+ L+ RV + +M M + G+A Y
Sbjct: 285 LRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNV 344
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LC + ++ A SV M+ G P++ TY L+ + +D A +++++ R+G
Sbjct: 345 LIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSG 404
Query: 446 VE 447
+
Sbjct: 405 CK 406
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 9/272 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T + + L GR L ++ M + G+ S +++ LC G A ++
Sbjct: 305 ATFTALVGGLFNDGRVHDALDMWKCMVAE-GWAPSTVSYNVLIRGLCSVGDLKGASSVLN 363
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
D FP+ + LI G+ G LD A + +M R G + V Y + V C
Sbjct: 364 DMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYT---NMVGVFC 420
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+K + ++AE ++ M P N TFN LI +LC RR A+ +F+ M GC
Sbjct: 421 KKL----MFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCP 476
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ L+ L++ G+ +M+ M++ G + Y ++ LC + +AM
Sbjct: 477 PNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFF 536
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+M G PD+ T+ ++ +C V A
Sbjct: 537 VGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMA 568
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + + + +V C+ G A L + P+ L+ G DG++ +A
Sbjct: 264 GLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDA 323
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ + M G+ TV+YN + + LC D A VL DME +G N T
Sbjct: 324 LDMWKCMVAEGWAPSTVSYNVL---IRGLCSVGDL----KGASSVLNDMEQHGCFPNART 376
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LI K + AI ++ M GC PN + ++ + + + +ID+M
Sbjct: 377 YSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKML 436
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ + LC R+ +A+ VF +M+ G P+ TY+ L+
Sbjct: 437 VENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCG 496
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A + E +G+E+ Y
Sbjct: 497 DALQMVIEMQNHGIELSLVTY 517
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 8/294 (2%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
T A + RL AG L R + D + +V C +G + A+++
Sbjct: 2 AATTAVAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVF 61
Query: 223 KDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ P++ LI G+ + G+ ++ L +M GG E YN + V +
Sbjct: 62 DVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNIL---VGEW 118
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
CR + R A + +M G+ RNV ++N LI+ LC+ R+ +DA +L M G
Sbjct: 119 CRTGEFER----ARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGI 174
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ TF +L+ +A ++ ++M+ AGY Y + C + +A
Sbjct: 175 RPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANR 234
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
F MK G P TY +L+ + N +DKA +F + G+EV + Y V
Sbjct: 235 AFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGV 288
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 11/265 (4%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
FE M G R+ S ++ LC A +L++ E I P +LL+ G+
Sbjct: 130 LFEEMPAK-GITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGY 188
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
GK+ A + +M G++ V YN + ++ CR +D R A + DM+
Sbjct: 189 GKAGKMSNALHFSNQMRMAGYQPSAVTYNAL---IAGFCRARDMIR----ANRAFSDMKE 241
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ T+ +LI + + A ++F M + G + T+ VL+ +L + +
Sbjct: 242 RGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKD 301
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE-QAMSVFEKMKTDGHNPDSETYDLLM 422
++ + G +G Y+ L G E +AM + +M+ G P+S +Y L +
Sbjct: 302 ARKLFQSIGEKGLQVGNV-IYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTI 360
Query: 423 TKWCAHNRVDKANALFDEAVRNGVE 447
C + +A AL D+ VR GV+
Sbjct: 361 RILCNDGKCSEAEALIDDMVRAGVQ 385
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 19/326 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D ++++ T + +D + + G L +ME +
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVI 257
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++G S A+ L + + IFPD + +I G+C G+ +A++L +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V YN +++ K + F EAE++ +M G+ N T++ +I
Sbjct: 318 ERKISPDVVTYNALINAFVK----EGKFF---EAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY M GC PN TF LI A R+ +G E++ M G
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + + + A+ + ++M + G PD T D L+ C + ++ A +F
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 441 AVR-----------NGVEVKPKEYRV 455
+ NGVE + Y +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNI 516
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 139/326 (42%), Gaps = 29/326 (8%)
Query: 133 TLSFFTDYFGRRKDFKAI-HDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S D F ++ A H F + + P T + ID A R + M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGK 248
+ G D + ++ G + A L+++ ++ + PD CD L+ G C +GK
Sbjct: 422 -TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 249 LDEAKRLAREMYRG-----------GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L +A + + M + G E YN + +S L + EAE++
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL---ISGLINEGKFL----EAEEL 533
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M + G+ + T++ +I LCK R ++A ++F MG PN TF LI +
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG---IERIEQAMSVFEKMKTDGHNPD 414
A RV +G E+ M G Y +T +CG + I A+ +F++M + G PD
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITY---ITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 415 SETYDLLMTKWCAHNRVDKANALFDE 440
+ T ++T + + +A A+ ++
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G KR D + L+ E + E G LV DT + LI G+ + G L+ A
Sbjct: 407 GAKRIDDGMELLHE-MTETG-------LVADTTTY--------NTLIHGFYLVGDLNAAL 450
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME----YNGVPRN 309
L +EM G V + +LD + + KD + +K D++ +NGV +
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V+T+N+LIS L + +A +L+ M G P+ T+ +I L + +R+ E +M D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M S ++ + + C R++ + +F +M G ++ TY L+ +
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 430 RVDKANALFDEAVRNGV 446
++ A +F E + +GV
Sbjct: 631 NINGALDIFQEMISSGV 647
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVK---------DTA---NEIFPDDKICDLLIK 241
G D + +++ LC+NG A ++ K D + N + PD + ++LI
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G +GK EA+ L EM G T+ Y+ ++D LC++ RLD EA ++ M
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID---GLCKQS---RLD-EATQMFDSM 572
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
NV TF LI+ CK R +D ++LF MG G N T++ LI + +
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++ M S+G LT L E +++A+++ EK++
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 16/309 (5%)
Query: 146 DFKAIHDFLVDNKEVLGPKTLASCID------RLVRAGRPTQVLGFFERMERDYGFKRDK 199
+ K + D + ++L + L S +D +VR RP V+ +++MER + D
Sbjct: 56 EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDI 114
Query: 200 DSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
S ++++ C +A K T + PD + L+ G CV+ ++ EA L +
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M+ V + +++ LCR+ EA +L M +G+ T+ ++
Sbjct: 175 MFETTCRPNVVTFTTLMN---GLCREGRIV----EAVALLDRMMEDGLQPTQITYGTIVD 227
Query: 319 NLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+CKI + A+ L +M E PN + +I SL + R + + M+ G
Sbjct: 228 GMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + C R A + ++M +PD TY+ L+ + + +A L
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347
Query: 438 FDEAVRNGV 446
+DE + G+
Sbjct: 348 YDEMLPRGI 356
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 134/288 (46%), Gaps = 10/288 (3%)
Query: 148 KAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
+++ + LV+ K + T + + R G+ + L + ME+ + S ++++
Sbjct: 310 ESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV--NIVSYNILIK 367
Query: 208 KLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
L ENG A + + A D+ + I G CV+G +++A + +E+ G L
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHL 427
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
AY I+DC LC+K+ RL+ EA ++ +M +GV N N LI L + R
Sbjct: 428 DVYAYASIIDC---LCKKR---RLE-EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
DA L MG+ GC P ++ +LI L +A + GE + M G K Y
Sbjct: 481 SDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSIL 540
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
L LC +IE A+ ++ + G PD +++L+ C+ ++D A
Sbjct: 541 LGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDA 588
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L G + LG + +E G D + +++ LC+ A LVK+ +
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESK-GGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHG 459
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ + +C+ LI G D +L +A L R M + G V+YN IL C LC + F
Sbjct: 460 VELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYN-ILIC--GLC-EAGKF 515
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA + +M NG+ +++T+++L+ LC+ R+ E A++L+++ + G P+
Sbjct: 516 ---GEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMH 572
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L ++ + ++ M+ Y + + +A ++ M
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYK 632
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PD +Y+ ++ C +RV A FD+A +G+
Sbjct: 633 MGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGI 670
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 145/356 (40%), Gaps = 55/356 (15%)
Query: 135 SFFTDYFGRRKDFKA---IHDFLVDNKEVL-GPKTLASCIDRLVRAGRPTQVLGFFERME 190
+ D F + KD K + D L+++ V KT I L + GR L ++RM+
Sbjct: 223 NILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMK 282
Query: 191 RDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKD-----------TANEIFPDDKIC- 236
++ +R+KD + ++ LC+ G AE + + T N + C
Sbjct: 283 QN---EREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCG 339
Query: 237 -----------------------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
++LIKG +GK+DEA + R M G+ Y
Sbjct: 340 KIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGI 399
Query: 274 ILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+ CV+ K A V+ ++E G +V + +I LCK RR E+A
Sbjct: 400 FIHGLCVNGYVNK---------ALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASN 450
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
L M + G N LI L + +R+ + ++ M G Y + LC
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLC 510
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ +A + ++M +G PD +TY +L+ C +++ A L+ + +++G+E
Sbjct: 511 EAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLE 566
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+KL++D++ ++P+ K +++I G G++D+ ++ M + E Y+ + +
Sbjct: 243 DKLLEDSS--VYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSL---I 297
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC D +D +AE V ++ +V T+N ++ C+ + +++++L +R+ E
Sbjct: 298 HGLC---DEGNVD-KAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLEL-WRIME 352
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
N ++ +LIK L + ++ E + M + GYA Y F+ LC + +
Sbjct: 353 QRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNK 412
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
A+ V +++++ G + D Y ++ C R+++A+ L E ++GVE+
Sbjct: 413 ALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVEL 462
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 131/326 (40%), Gaps = 53/326 (16%)
Query: 160 VLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY 217
V+ PK+L+ + L P F+ R G+ ++ +L E ++
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTH 61
Query: 218 AEKLVKDT-ANEIFPDDKICDLLIKGW----CVDGKLDEAKRLAREMYRGGFELGTVAYN 272
++V+ + E D+ + +IK + D LD KR+ RE++ G E G +YN
Sbjct: 62 VGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRM-REIF--GCEPGIRSYN 118
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+L+ K +++S + E GV N++T+NVLI CK + E A
Sbjct: 119 TLLN---AFVEAKQWVKVES----LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA-------------IG 379
M + G P+ ++ +I L + ++ + E+ D M A +
Sbjct: 172 LNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLK 231
Query: 380 KKDYYE-----------------------FLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+KD+ ++ L R++ + ++++MK + D
Sbjct: 232 EKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLY 291
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAV 442
TY L+ C VDKA ++F+E V
Sbjct: 292 TYSSLIHGLCDEGNVDKAESVFNELV 317
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 58/322 (18%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-- 230
L R GR + L M R +G D + V+ LC G + A L+ +E+F
Sbjct: 182 LCRLGRADEALTMLRSMAR-HGCVPDTVLYQTVIHALCAQGGVNEAATLL----DEMFLM 236
Query: 231 ---PDDKICDLLIKGWCVDGKLDEAKRLA-REMYRG--------GF-------------- 264
D + ++ G C G+L EA RL R M RG GF
Sbjct: 237 GCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEA 296
Query: 265 --------ELGTVAYN-----CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
EL V +N C+LD KL EA ++ M G P +
Sbjct: 297 RTMLGRVPELNVVLFNTVIGRCLLD--GKL----------KEAAELYETMGSKGCPPDAH 344
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+++LI LCK+ R A+KL M + G P+ T+ +L+ S + M++ M
Sbjct: 345 TYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVM 404
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G ++ + Y + +C R++ AM ++MK+ G+ PD TY+ ++ C +N++
Sbjct: 405 SDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQM 464
Query: 432 DKANALFDEAVRNGVEVKPKEY 453
++A LF+ + GV Y
Sbjct: 465 EEAEYLFENLLHEGVVANAITY 486
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 98/244 (40%), Gaps = 38/244 (15%)
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
+ C G+ DEA + R M R G TV Y + + LC + +EA +L +
Sbjct: 180 RALCRLGRADEALTMLRSMARHGCVPDTVLYQTV---IHALCAQGGV----NEAATLLDE 232
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G +V TFN ++ LC + R +A +L RM GC PN T+ L+K L A++
Sbjct: 233 MFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQ 292
Query: 361 VGEGDEMIDR-------------------------------MKSAGYAIGKKDYYEFLTR 389
V E M+ R M S G Y +
Sbjct: 293 VEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHG 352
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
LC + R+ AM + +M+ G P TY +L+ +C + D A+ + G+ +
Sbjct: 353 LCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMN 412
Query: 450 PKEY 453
+ Y
Sbjct: 413 LEGY 416
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 124/282 (43%), Gaps = 9/282 (3%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDD 233
R G + E M D G + + ++ +C++ A + +++ ++ + PD
Sbjct: 390 RNGMWDNIRAMLEVMS-DKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDI 448
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ +I C + +++EA+ L + G + YN ++ + + +D L +
Sbjct: 449 CTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLAN- 507
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
DM +G ++ ++N LI LC+ + +I L M E G PN ++ +LI
Sbjct: 508 ------DMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLIS 561
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L + RV + E+ M + Y + LC + + A+++ EK+ + +
Sbjct: 562 ELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHA 621
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D TY++L++ C + A+ L + AV +G+ + + +
Sbjct: 622 DIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGI 663
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +LI G C G+L A +L REM GF V Y +L CR +
Sbjct: 341 PDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLH---SFCRNG----M 393
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+L M G+ N+E +N +I +CK RR +DA++ M G P+ T+
Sbjct: 394 WDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNT 453
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L ++ E + + + + G Y + L + A+S+ M G
Sbjct: 454 IIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHG 513
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ D +Y+ L+ C VD++ L E G++ Y +
Sbjct: 514 CSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNL 558
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 65/133 (48%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
VP TF++ LC++ R+++A+ + M GC P+ + +I +L V E
Sbjct: 168 VPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAA 227
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++D M G + + + + LC + R+ +A + ++M G P++ TY L+
Sbjct: 228 TLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGL 287
Query: 426 CAHNRVDKANALF 438
C ++V++A +
Sbjct: 288 CLASQVEEARTML 300
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 9/202 (4%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
L+ V T + I L+R G + M +G D S +++ LC +G
Sbjct: 474 LLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVL-HGCSLDIVSYNGLIKALCRDG 532
Query: 214 YASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ L+ + A + I P++ +LLI C ++ +A L++EM V YN
Sbjct: 533 NVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYN 592
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+++ + K+ L L + V ++ T+N+LIS CK R DA L
Sbjct: 593 TLINGLCKMGWMHAALNL-------LEKLHNEDVHADIITYNILISWHCKARLLHDASML 645
Query: 333 FYRMGEWGCHPNETTFLVLIKS 354
R G PNE T+ +++++
Sbjct: 646 LNRAVTSGITPNERTWGIMVQN 667
>gi|147827256|emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
Length = 655
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 176/404 (43%), Gaps = 33/404 (8%)
Query: 64 ARSLSGELLENLEADPL--PISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWL 121
+S S + + +E +PL PI F H S V+ TL+ + L F W+
Sbjct: 259 TQSFSTKPFKPIEPEPLSNPIISPNSTSFDH-----STVRQTLSCYANDWKRALEFFDWV 313
Query: 122 TQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE--VLGPK--TLASCIDRLVRAG 177
F+HT +T + D G+ +F I + K V P T R A
Sbjct: 314 QTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAAAH 373
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDD-KI 235
+ + + R E ++ RD+ S +++ LCE + AE+L +K++ + +F DD KI
Sbjct: 374 LVEEAMNAYYRTE-EFNL-RDETSYSNLIDALCEYKHVIEAEELFLKESKDLVFNDDVKI 431
Query: 236 CDLLIKGWCVDGKLDEAK--------RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+++++GW +G ++E K +L +EM + G L VAYN ++ +
Sbjct: 432 YNIILRGWFKNGVVEECKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFS 491
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
R+ E ++V G NV T+N +I LC+ R +A +F +M E G PN T
Sbjct: 492 IRVFREXKEV-------GCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVIT 544
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ + + ++ DRM ++G Y + + + V++KM+
Sbjct: 545 YHCFFGCIEKPKQI---LRTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKME 601
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
G +PD+ Y+ L+ VD A +E + G+ KP+
Sbjct: 602 EQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPR 645
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 15/285 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T ++RL + R L E M G K D V+ LC+ A EK
Sbjct: 11 TYGPIVERLCKTKRIDDALATVEEMATR-GIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 69
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+VK N P+ + LI G C +++ A L +EM G+ V+YN ++D
Sbjct: 70 MVKQRIN---PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID---G 123
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
C+KKD +K++ N VP NV T+ LI L K + + A ++ M + G
Sbjct: 124 FCKKKDLVAAKDVFDKMV---RSNCVP-NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ LI + RV E +++++M + G A Y L LC +++E A
Sbjct: 180 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 239
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+F M +P TY+ L+ C H ++D A+ L+ E + G
Sbjct: 240 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 284
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +++ C ++D+A EM G + YN +L S LC+++
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVL---SGLCQEEKV--- 60
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA + M + NV T+N LI+ LCK R E A +LF M G P E ++
Sbjct: 61 -EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 119
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI + + ++ D+M + Y + L +++ A V + M G
Sbjct: 120 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P+ TY L+ +C RVD+A+ L ++ V G+
Sbjct: 180 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 215
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 9/250 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + I+ L +A R F+ M G+ + S +++ C+ A+ + K
Sbjct: 81 TYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 139
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ LI G GK+ A + M + G Y+C++D K+ R
Sbjct: 140 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV-R 198
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ D EA K+L M G+ V T+N+L+++LC+ + EDA KLF M + CHP
Sbjct: 199 RVD------EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 252
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ L+++L ++ + M + G Y L ++ +A +
Sbjct: 253 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 312
Query: 404 EKMKTDGHNP 413
EKMK NP
Sbjct: 313 EKMKLTKRNP 322
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P + T+ ++ LCK +R +DA+ M G P+ + ++ L Q +V E
Sbjct: 6 PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ ++M Y + LC RIE A +F++M G+ P +Y+ L+ +C
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 427 AHNRVDKANALFDEAVRN 444
+ A +FD+ VR+
Sbjct: 126 KKKDLVAAKDVFDKMVRS 143
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 137/303 (45%), Gaps = 19/303 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD---YGF--KRDKDSLRLVVEKLCENGYASYAE 219
T A+ + L ++G L + M D YG K + S ++++ LC+ G A
Sbjct: 444 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 503
Query: 220 KLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+L K+ A + PD LI G+C GK +AK L EM G + ++ ++D
Sbjct: 504 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID-- 561
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC++ EA ++L M G N T+ L+ LC R +A +LF +M +
Sbjct: 562 -MLCKEGKVI----EANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 616
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK------DYYEFLTRLCG 392
GC P+ T+ L+K L Q + E+ +M S G Y + LC
Sbjct: 617 LGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 676
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
R ++A +F++MK G P+ +Y L+ +C +++ A LF+E V GV++
Sbjct: 677 HGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVT 736
Query: 453 YRV 455
Y V
Sbjct: 737 YSV 739
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 19/287 (6%)
Query: 173 LVRAGRPTQVLGFFERMERD---YGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDT-A 226
L + G+ L + M D YG K S ++++ LC++ A +L K+ A
Sbjct: 90 LCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKA 149
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD LI G+C GK ++AK L EM G + ++D LC++
Sbjct: 150 QGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLID---ILCKEGK 206
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
EA ++L M G ++ T++ LI LC R +A +LF M + GC P+
Sbjct: 207 VI----EANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAI 262
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRM--KSAGYAIGKK----DYYEFLTRLCGIERIEQAM 400
+ L+K L Q + ++ M + Y I K Y + LC R ++A
Sbjct: 263 AYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 322
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+F++MK G PD +Y L+ +C + +KA LF+E + G++
Sbjct: 323 ELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 369
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 129/292 (44%), Gaps = 19/292 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANE 228
ID L + G+ + E + + G D + +V+ LC S A +L +K
Sbjct: 379 IDMLCKKGKVIEANKLLEVVIQ-RGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG------TVAYNCILDCVSKLC 282
P+ C L+KG C G + A L + M G ++Y+ I+D + K C
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK-C 496
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++D EA ++ +M+ GV +V ++ LI C+ + +DA LF M + G
Sbjct: 497 GRED------EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQ 550
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ TTF VLI L + +V E +E+++ M G Y + LC +RI +A +
Sbjct: 551 PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 610
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN----GVEVKP 450
F KM+ G PD TY LM C + A L + + + G KP
Sbjct: 611 FMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 662
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 19/292 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID + G+ + E M + G D + +++ LC S A +L
Sbjct: 17 IDMFCKEGKVIEANELLEVMVQ-RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 75
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT------VAYNCILDCVSKLC 282
PD L+KG C GK++ A L +EM + G V+Y+ I+D LC
Sbjct: 76 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIID---GLC 132
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ R + EA ++ +M+ G+ +V ++ LI C+ + E A LF M + G
Sbjct: 133 KD----RREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIR 188
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
+ TT +LI L + +V E +E+++ M G + Y + LC RI +A +
Sbjct: 189 SDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRL 248
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV----RNGVEVKP 450
F M+ G PD+ Y LM C ++ A L E + R G++ KP
Sbjct: 249 FMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 15/272 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + GR + F+ M + G D S ++ C +G A+ L + +
Sbjct: 490 IDGLCKCGREDEARELFKEM-KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LI C +GK+ EA L M + G TV Y + V LC
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL---VKGLCMND--- 602
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM----GEWGCH-- 342
R+ SEA ++ + M+ G +V T+ L+ LC+ + A++L +M G++G +
Sbjct: 603 RI-SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 661
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ ++ ++I L + R E E+ MK+ G Y + C ++E A +
Sbjct: 662 PDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHL 721
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
F +M G ++ TY +++ +C ++DKA
Sbjct: 722 FNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 33/324 (10%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ + + + ++ +L T ++ I L R ++ F M++ G + D +
Sbjct: 205 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQK-LGCRPDAIA 263
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-------DLLIKGWCVDGKLDEAKR 254
+++ LC+ G + A +L ++ N+ C ++I G C D + DEA+
Sbjct: 264 YGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 323
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV------LLDMEYNGVPR 308
L +EM G ++Y ++ F L + EK +LD+ G+
Sbjct: 324 LFKEMKAQGIMPDVISYTTLIH----------GFCLSGKWEKAKCLFNEMLDV---GIQP 370
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T +VLI LCK + +A KL + + GC P+ T L+K L R+ + ++
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLF 430
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD----GHN--PDSETYDLLM 422
+M+ G + LC I+ A+ + + M +D G N P++ +Y +++
Sbjct: 431 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIII 490
Query: 423 TKWCAHNRVDKANALFDEAVRNGV 446
C R D+A LF E GV
Sbjct: 491 DGLCKCGREDEARELFKEMKALGV 514
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 91/224 (40%), Gaps = 48/224 (21%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD +LI +C +GK+ EA L M + G CILD V
Sbjct: 6 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRG---------CILDIV---------- 46
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
T++ LI LC R +A +LF M + GC P+ +
Sbjct: 47 -----------------------TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAY 83
Query: 349 LVLIKSLYQAARVGEGDEMIDRM--KSAGYAIGKK----DYYEFLTRLCGIERIEQAMSV 402
L+K L Q ++ + M ++ Y I K Y + LC R ++A +
Sbjct: 84 GTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEAREL 143
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
F++MK G PD +Y L+ +C + +KA LF+E + G+
Sbjct: 144 FKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGI 187
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 9/246 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S I R+G+ F M D G + D + ++++ LC+ G A +L++
Sbjct: 522 TSLIHGFCRSGKWKDAKYLFNEM-VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMI 580
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
P+ L+KG C++ ++ EA +L +M + G V Y ++ + + K
Sbjct: 581 QRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIK 640
Query: 286 DPFRLDSEAEKVLLDMEYNGV--PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
L +K+L D G +V +++++I LCK R ++A +LF M G P
Sbjct: 641 TALELH---KKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 697
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ LI ++ ++ + + + M G + Y + C +I++A+ F
Sbjct: 698 NVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL--F 755
Query: 404 EKMKTD 409
+KM+ +
Sbjct: 756 QKMEAN 761
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + G+ +V T VLI CK + +A +L M + GC + T+ LIK L R
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN------PD 414
+ E ++ MK G Y + LC +I A+ + ++M D P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+Y +++ C R D+A LF E G+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGM 152
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M G P+ TT VLI + +V E +E+++ M G + Y + LC R
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN----GVEVKP 450
I +A +F MK G PD+ Y LM C +++ A L E + + G++ KP
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKP 119
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 37/285 (12%)
Query: 194 GFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G D + +++E C+ GY E + A P++ ++L+ G C +G +D+A
Sbjct: 197 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 256
Query: 253 KRLAREMYRGGFELGTVAYNCIL----------------------DC----------VSK 280
L R + G + TV YN +L +C +
Sbjct: 257 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 316
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LCRK L +A ++L M +G N+ T+N +I+ LC+ R + A+ L +M +G
Sbjct: 317 LCRKG----LLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P+ T+ L+K L AA+ + +E++D M G + + LC + A+
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 432
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
VF++M G P+S TY +++ ++D+A LF+E G
Sbjct: 433 EVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 477
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 9/230 (3%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDE 251
+G K + V++ LC A++LV + E P++ +++I C G L +
Sbjct: 266 HGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQ 325
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A +L +M + G V YN I ++ LC +++ +D A +L M+ G ++
Sbjct: 326 AIQLLEKMSKHGCTANIVTYNAI---INGLCEQRN---VDG-AMGLLSKMKSYGCKPDIV 378
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N L+ LC + DA +L M + GC P+ TF LI L Q + + E+ +M
Sbjct: 379 TYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 438
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
G Y ++ L +++QA+ +F +M G NPD + Y LL
Sbjct: 439 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLL 487
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 119/289 (41%), Gaps = 25/289 (8%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDK---- 234
P ++LG R+ + D D+ +VE A+ A +LV+D PDD
Sbjct: 68 PRRLLGSDRRLSA-LVHRGDLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVV 126
Query: 235 -ICD---------LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
C L G+C G+L +A+R+ GG + AY + LC +
Sbjct: 127 GACGPAATVVAYGALTDGYCRAGRLGDARRVV-----GGMPVQPNAYT-YNPLIHTLCER 180
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+A VL DM G +V T+N+L+ CK R A++L M GC PN
Sbjct: 181 GQV----RDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPN 236
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ VL+ + V + E++ + S G +Y L LC ER A +
Sbjct: 237 NVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVT 296
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+M + P+ T+++++ C + +A L ++ ++G Y
Sbjct: 297 EMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 345
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 10/270 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
I L R G Q + E+M + +G + + ++ LCE A L+ K +
Sbjct: 314 IYSLCRKGLLQQAIQLLEKMSK-HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + L+KG C + +A+ L M + G V +N + + LC+K
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTL---IGFLCQKG--- 426
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L +A +V M G N T++ +IS L K + + A++LF MG G +P++ +
Sbjct: 427 -LMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-Y 484
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L + L + E + + +++ +G + Y L LC + E A+ + M +
Sbjct: 485 QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVS 544
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
G PD TY +L+ +++A L
Sbjct: 545 SGCMPDDLTYVILIEGLAYEGYLNEARELL 574
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLI 240
+G +M + YG K D + +++ LC AE+L+ + T N PD+ + LI
Sbjct: 361 AMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLI 419
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL---------- 290
C G + +A + ++M G ++ Y+ I+ ++K + L
Sbjct: 420 GFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFN 479
Query: 291 -----------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
EA + + ++ +G+ + +N ++ LC+ ++E AI +
Sbjct: 480 PDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIM 539
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
M GC P++ T+++LI+ L + E E++ ++ S
Sbjct: 540 AYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS 579
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 11/302 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+ DN V T + ++ R GR + + FE M+ G + + + +V+ C G
Sbjct: 291 MFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLK-GCEPNVWTYNAMVQGFCNVG 349
Query: 214 YASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
A L+ D E + PD +LLI+G C+DG ++ A RL R M G Y
Sbjct: 350 KVYKAMALL-DQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTY 408
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N ++D LC+ ++D EA + +EY G+ N TFN +I+ LCK + + A
Sbjct: 409 NVLID---ALCKTG---KVD-EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACT 461
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+M GC P+ T+ I++L + EG ID M +Y + RL
Sbjct: 462 FLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLF 521
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
A ++ +M + G +PD TY + +C R+ +A + E + G+ V
Sbjct: 522 KERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAM 581
Query: 452 EY 453
Y
Sbjct: 582 AY 583
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 10/253 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF +D S ++E CE G A +L ++ PD L+KG C + +E
Sbjct: 194 GFSQDAVSYAALIEGFCETGRVDEALELFRELEQ---PDMYTHAALVKGLCDARRGEEGL 250
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ ++M G+ T AY ++D CR++ EAEK+L +M NG+ T
Sbjct: 251 YMLQKMKELGWRPATRAYAALVDL---WCREQKA----EEAEKMLNEMFDNGLVPCAVTC 303
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+++ C+ R A+++F M GC PN T+ +++ +V + ++D+M+
Sbjct: 304 TAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRE 363
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + C IE A + M+ +G D TY++L+ C +VD+
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423
Query: 434 ANALFDEAVRNGV 446
A +LFD G+
Sbjct: 424 ACSLFDGLEYRGI 436
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 143/331 (43%), Gaps = 16/331 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ A+ I+ GR + L F +E+ D + +V+ LC+ +++
Sbjct: 201 SYAALIEGFCETGRVDEALELFRELEQP-----DMYTHAALVKGLCDARRGEEGLYMLQK 255
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P + L+ WC + K +EA+++ EM+ G V + V+ CR
Sbjct: 256 MKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV---VNAYCR 312
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ R+ S A +V M+ G NV T+N ++ C + + A+ L +M E G P
Sbjct: 313 EG---RM-SGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEP 368
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +LI+ + ++ M+ G A + Y + LC ++++A S+F
Sbjct: 369 DVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
+ ++ G P+S T++ ++ C + D A ++ V G P Y P +++
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG--CAPDTYTYSP-FIENL 485
Query: 464 IAVKKGKKRETLPEKMARKRRRLKQIRLSFV 494
K ++ + ++M +K + + + V
Sbjct: 486 CKTKGSREGLSFIDEMLQKDVKPSTVNYTIV 516
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 12/244 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC +A++ + + PD + LI G+C +LD A+ L +M G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F V+Y +++ + R + L E E+ ++ T L+ LC
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELEQ-----------PDMYTHAALVKGLCDA 243
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR E+ + + +M E G P + L+ + + E ++M++ M G
Sbjct: 244 RRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTC 303
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C R+ A+ VFE MK G P+ TY+ ++ +C +V KA AL D+
Sbjct: 304 TAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRE 363
Query: 444 NGVE 447
GVE
Sbjct: 364 CGVE 367
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 112/324 (34%), Gaps = 52/324 (16%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG----YASYAEKLVKDT 225
ID L + G+ + F+ +E G + + + V+ LC+ G ++ EK+V
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYR-GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--------- 276
PD I+ C E EM + + TV Y ++D
Sbjct: 471 CA---PDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527
Query: 277 -------------CVSKLCRKKDPFRLDS------EAEKVLLDMEYNGVPRNVETFNVLI 317
C + R EAE V+++M+ G+ + +N LI
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL----------------IKSLYQAARV 361
I +++ A+ + M PN TF +L S+++ +
Sbjct: 588 DGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIEL 647
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ E+ + MK + Y L R+++ S+ MK D + + Y L
Sbjct: 648 ADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707
Query: 422 MTKWCAHNRVDKANALFDEAVRNG 445
+ +C A AL + +G
Sbjct: 708 VNCFCKLRMYPDAWALLCSMIGHG 731
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 38/186 (20%)
Query: 296 KVLLDMEYNGVPRNV-ETFNVLISNLCK---IRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
++ M ++G P T+N LI LC+ +R ++ + L R G W P+ TF L
Sbjct: 114 RLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSG-W--RPDAFTFNSL 170
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF-------- 403
I + ++ ++ D+M G++ Y + C R+++A+ +F
Sbjct: 171 ILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDM 230
Query: 404 -----------------------EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+KMK G P + Y L+ WC + ++A + +E
Sbjct: 231 YTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNE 290
Query: 441 AVRNGV 446
NG+
Sbjct: 291 MFDNGL 296
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGC-HPNETTFLVLIKSLYQAARVGEGDEMIDR 370
TF L+++ + + ++LF M G P T+ LI++L + A + +
Sbjct: 95 TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M +G+ + + C ++++ A +F+KM G + D+ +Y L+ +C R
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214
Query: 431 VDKANALFDE 440
VD+A LF E
Sbjct: 215 VDEALELFRE 224
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L R G + F+ ME G K + +V LC+ G + L+KD
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ EI P+ ++L+ + +GKL EA L +EM G + YN ++D C
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD---GYCM 345
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ RL SEA +L M N ++ TF LI C ++R +D +K+F + + G
Sbjct: 346 QN---RL-SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +L++ Q+ ++ +E+ M S G Y L LC ++E+A+ +F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E ++ + Y ++ C +V+ A LF GV+ Y V
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 9/273 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
+ R + VL F +++E + G + +L +++ C +A ++ + P
Sbjct: 98 IARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + LIKG ++GK+ EA L M G + V YN I V+ +CR D
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSI---VNGICRSGDT---- 209
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A +L ME V +V T++ +I +LC+ + AI LF M G + T+ L
Sbjct: 210 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
++ L +A + +G ++ M S + L ++++A ++++M T G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+P+ TY+ LM +C NR+ +AN + D VRN
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 137/313 (43%), Gaps = 9/313 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ + + D +V+N T S ++ + R+G + L +ME + K D +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME-ERNVKADVFT 230
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC +G A L K+ + + + L++G C GK ++ L ++M
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ +N +LD K + + EA ++ +M G+ N+ T+N L+
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQ-------EANELYKEMITRGISPNIITYNTLMDGY 343
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C R +A + M C P+ TF LIK RV +G ++ + G
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C +I+ A +F++M + G PD TY +L+ C + +++KA +F++
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 441 AVRNGVEVKPKEY 453
++ +++ Y
Sbjct: 464 LQKSKMDLGIVMY 476
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 9/227 (3%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
D +V NK T S I R + F + + G + + ++V+ C+
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTYSILVQGFCQ 415
Query: 212 NGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+G AE+L ++ ++ + PD +L+ G C +GKL++A + ++ + +LG V
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y I++ + K + +D + L + GV NV T+ V+IS LCK +A
Sbjct: 476 YTTIIEGMCKGGKVEDAWNL-------FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
L +M E G PN+ T+ LI++ + + ++I+ MKS G++
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 7/183 (3%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+E NG+ N+ T N++I+ C+ ++ A + ++ + G P+ TTF LIK L+ +
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E ++DRM G Y + +C A+ + KM+ D TY
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK-------PIAVKKGKKRE 473
++ C +D A +LF E G++ Y R L K + +K RE
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 474 TLP 476
+P
Sbjct: 294 IVP 296
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 264 FELGTVAYNC-----ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
EL +A+N +++C + C+ + + + K+ G + TFN LI
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL-------GYEPDTTTFNTLIK 166
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
L + +A+ L RM E GC P+ T+ ++ + ++ +++ +M+
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC I+ A+S+F++M+T G TY+ L+ C + + L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 439 DEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
+ V E+ P + + VK+GK +E
Sbjct: 287 KDMVSR--EIVPNVITFNVLL---DVFVKEGKLQE 316
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 7/316 (2%)
Query: 138 TDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGF 195
D GR F A +V+ +T A R V AG Q + F+ ME G
Sbjct: 121 VDALGRAHQFDAAWRLVVEAAADGAATSRTFAVLARRYVAAGMTRQAVRAFDDMEAFVGR 180
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+ D +++ LC+ Y A ++ + P++K+ +LI GWC + D +++
Sbjct: 181 EPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYKYEPNEKMYTILIYGWCKVNRNDMSQKF 240
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD---SEAEKVLLDMEYNGVPRNVET 312
++M G E V YN +L+ V + R D AE +L +M G+ +V +
Sbjct: 241 LKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDRGIEPDVTS 300
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+++++ + ++E + +F M + G P T+ +IK L R+ + + ++ M
Sbjct: 301 YSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAERLLHEMA 360
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH--NPDSETYDLLMTKWCAHNR 430
S G Y F G + + A+ +++KMK PD +Y +L+ + N+
Sbjct: 361 SEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHILLGMFVKLNQ 420
Query: 431 VDKANALFDEAVRNGV 446
L+++ + V
Sbjct: 421 HGTVTELWNDMCESTV 436
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N + ++ ++ L + + + A +L G TF VL + A +
Sbjct: 113 NADAYDAVVDALGRAHQFDAAWRLVVEAAADGA-ATSRTFAVLARRYVAAGMTRQAVRAF 171
Query: 369 DRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
D M++ G ++ L LC + + A VF K K + P+ + Y +L+ WC
Sbjct: 172 DDMEAFVGREPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYK-YEPNEKMYTILIYGWCK 230
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRV 455
NR D + + + +G+E Y +
Sbjct: 231 VNRNDMSQKFLKDMIDHGIEPNVVTYNI 258
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 155/360 (43%), Gaps = 14/360 (3%)
Query: 94 TPTPSLVQSTLNFSPEAGRAILGFNHWLTQNAN-FSHTDETLSFFTDYFGRRKDFK---A 149
T TP+ VQ + + +A++ F+ + AN F H T S F+
Sbjct: 41 TVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAET 100
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ D + + K + L S R +P + F +M+ D+ K + S V+ L
Sbjct: 101 LLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQ-DFHCKPTEKSYISVLAIL 159
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD-GKLDEAKRLAREMYRGGFELG 267
E A + +D I P ++LIK +C + G +D+A L R M G E
Sbjct: 160 VEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPD 219
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ Y + ++ LCR FR EA+++L +ME G +V T+ +I LC++ +
Sbjct: 220 SYTYGTL---INGLCR----FRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVD 272
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A++L M + PN T+ L+ + ++++ M Y L
Sbjct: 273 EAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLL 332
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
LC +I +A+ +F++MK G PD+ Y ++ C +R +A DE V G++
Sbjct: 333 NGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIK 392
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 21/311 (6%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F + DF E K+ S + LV + F+ M R G SL +++
Sbjct: 137 FHKMQDFHCKPTE----KSYISVLAILVEENQLKSAFRFYRDM-RKMGIPPTVTSLNVLI 191
Query: 207 EKLCEN-GYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ C+N G A L + +N PD LI G C + EAK L +EM G
Sbjct: 192 KAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGC 251
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
V Y I + LC+ + EA ++L DM+ + NV T++ L+ CK
Sbjct: 252 SPSVVTYTSI---IHGLCQLNNV----DEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTG 304
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
S A + M + PN ++ L+ L ++ E E+ DRMK G+ Y
Sbjct: 305 HSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYG 364
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL-------LMTKWCAHNRVDKANAL 437
+ + LC + R ++A + ++M G P+ T+ L ++ C N ++A L
Sbjct: 365 KIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQL 424
Query: 438 FDEAVRNGVEV 448
+ + G+ +
Sbjct: 425 YLSVLTRGISI 435
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-NGYASYAEKLVKDT 225
++ ++ L G+ + L F+RM+ GFK D +V LC+ + + A L +
Sbjct: 329 STLLNGLCNEGKINEALEIFDRMKLQ-GFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMV 387
Query: 226 ANEIFPDDKICDL-------LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
I P+ L +I G C + A +L + G + +N +L C
Sbjct: 388 LCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKC- 446
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
C KKD + ++L +M NG E ++ +++ C R++ DA+KL
Sbjct: 447 --FCNKKDL----PKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLL 495
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 14/338 (4%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGR 178
QN H T S + F RR L + LG + TL+S ++ + R
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK-LGYEPNIVTLSSLLNGYCHSKR 166
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICD 237
++ + ++M G++ + + ++ L + AS A L+ + A PD
Sbjct: 167 ISEAVALVDQMFVT-GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+++ G C G D A L +M +G E G + YN I+D + K D L E
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE---- 281
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
ME G+ NV T++ LIS LC R DA +L M E +P+ TF LI + +
Sbjct: 282 ---METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
++ E +++ D M Y + C +R+++A +FE M + PD T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y+ L+ +C + RV++ +F E + G+ Y +
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 128/281 (45%), Gaps = 9/281 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ ID L + L F+ ME G + + + ++ LC G S A +L+ D
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+I PD LI + +GKL EA++L EM + + V Y+ + ++ C
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL---INGFCMHD- 375
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
RLD EA+++ M +V T+N LI CK +R E+ +++F M + G N
Sbjct: 376 --RLD-EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +LI+ L+QA E+ M S G Y L LC ++E+AM VFE +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ P TY++++ C +V+ LF GV+
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 145/349 (41%), Gaps = 34/349 (9%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD V G + T + I L + ++ + +RM G + D + +VV L
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPDLVTYGVVVNGL 231
Query: 210 CENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ G A L+ K ++ P I + +I G C +D+A L +EM G
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 269 VAYNCILDCVSKLCRKKDPFRLDS----------------------------EAEKVLLD 300
V Y+ ++ C+ R D RL S EAEK+ +
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + ++ T++ LI+ C R ++A ++F M C P+ T+ LIK + R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V EG E+ M G Y + L + A +F++M +DG P+ TY+
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
L+ C + +++KA +F+ R+ +E Y + + K V+ G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 146/336 (43%), Gaps = 38/336 (11%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDY---------------------FGRRKDFKAIH 151
+L +N + + H D+ L+ F + +GR D +
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD----SLRLVVE 207
+++ K T ++ ID V+ G+ + ++ M KR D + ++
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-----VKRSIDPSIVTYSSLIN 369
Query: 208 KLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
C + A+++ + + FPD + LIKG+C +++E + REM + G
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
TV YN + + L + D A+++ +M +GVP N+ T+N L+ LCK +
Sbjct: 430 NTVTYNIL---IQGLFQAGDC----DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E A+ +F + P T+ ++I+ + +A +V +G ++ + G Y
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ C E+A ++F++MK DG P+S Y+ L+
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 19/241 (7%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R + K + +F+V T + I + R + + F M + G + +
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTY 434
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYR 261
++++ L + G A+++ K+ ++ P + + + L+ G C +GKL++A + + R
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
E YN +++ + K + +D + L ++ GV +V +N +IS C
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDL-------FCNLSLKGVKPDVVAYNTMISGFC 547
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD-----EMIDRMKSAGY 376
+ E+A LF M E G PN + LI+ AR+ +GD E+I M+S G+
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIR-----ARLRDGDREASAELIKEMRSCGF 602
Query: 377 A 377
A
Sbjct: 603 A 603
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
KLD+A L EM + + ++ +L ++K+ + L + + + G+P
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-------GIP 113
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N T+++LI+ C+ + A+ + +M + G PN T L+ + R+ E +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+D+M GY + + L + +AM++ ++M G PD TY +++ C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 428 HNRVDKANALFDEAVRNGVE 447
D A L ++ + +E
Sbjct: 234 RGDTDLAFNLLNKMEQGKLE 253
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 170/392 (43%), Gaps = 32/392 (8%)
Query: 100 VQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE 159
V TL F + +A+ FN W Q ++HT+++ + GR + +FL ++
Sbjct: 82 VLQTLGFLRDTSKALQFFN-W-AQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 160 ------VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
L + S + RAG + + F M + +G + ++ L + G
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIM-KSHGVSPSVVTFNSLLTILLKRG 198
Query: 214 YASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
+ A+K+ + + + PD ++LI+G+C++G +D+ R+ ++ R G E V Y
Sbjct: 199 RTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTY 258
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN--VETFNVLISNLCKIRRSEDA 329
N ++D LCR + A V+ M V N V T+ LI C R E A
Sbjct: 259 NTLVD---GLCRAGKV----TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKA 311
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ +F M G N T+ LIK L +A + + ++++ +AG D F T
Sbjct: 312 LAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILE--GTAGDGTFSPDTCTFNTL 369
Query: 390 L---CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR--- 443
+ C ++ A+ VFE+M PDS TY L+ C +KA L D+ +
Sbjct: 370 MHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429
Query: 444 --NGVEVKPKEYRVDP--RYLKKPIAVKKGKK 471
+G KP +P +YL + KK +K
Sbjct: 430 LLSGDGCKPLVAAYNPIFKYLCETGKTKKAEK 461
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 12/265 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDL 238
+ L FE M + G K + + +++ LCE + +++ TA + PD +
Sbjct: 310 KALAVFEEMV-NQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNT 368
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR----KKDPFRLDSEA 294
L+ C G LD+A ++ M + + Y+ + V LC+ +K LD
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSAL---VRSLCQGGHYEKAEDLLDKLL 425
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
E+ +L + +G V +N + LC+ +++ A K F ++ G + ++ LI
Sbjct: 426 ERKIL-LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMG 483
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ G E++ M + + Y + L +++ A+ EKM H P+
Sbjct: 484 HCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPN 543
Query: 415 SETYDLLMTKWCAHNRVDKANALFD 439
S T+ ++ K R ++ +L
Sbjct: 544 SSTFHSILAKLLEQGRASESASLIQ 568
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 28/218 (12%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T S I+ L+ +P L E+M R + + + ++ KL E G AS + L+
Sbjct: 510 ETYESLINGLLHMDKPLLALQSLEKMLRS-SHRPNSSTFHSILAKLLEQGRASESASLI- 567
Query: 224 DTANEIFPDDKI-CDLLIKGWCV-----DGKLDEAKRLAREMYRGGFELGT---VAYNCI 274
++ D I +L CV G D+A +L +Y G+ + + Y C
Sbjct: 568 ----QLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLC- 622
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
CRK + K+LL + +++ N +I LC+I + +A L+Y
Sbjct: 623 ------HCRKV------IQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYY 670
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ E G H + L SL ++ E + + RM+
Sbjct: 671 KLVEMGVHQQLSCQNQLKVSLKAGGKLEEAESVQKRME 708
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 137/303 (45%), Gaps = 19/303 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD---YGF--KRDKDSLRLVVEKLCENGYASYAE 219
T A+ + L ++G L + M D YG K + S ++++ LC+ G A
Sbjct: 600 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 659
Query: 220 KLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+L K+ A + PD LI G+C GK +AK L EM G + ++ ++D
Sbjct: 660 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID-- 717
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC++ EA ++L M G N T+ L+ LC R +A +LF +M +
Sbjct: 718 -MLCKEGKVI----EANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 772
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK------DYYEFLTRLCG 392
GC P+ T+ L+K L Q + E+ +M S G Y + LC
Sbjct: 773 LGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 832
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
R ++A +F++MK G P+ +Y L+ +C +++ A LF+E V GV++
Sbjct: 833 HGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVT 892
Query: 453 YRV 455
Y V
Sbjct: 893 YSV 895
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 131/295 (44%), Gaps = 19/295 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD---YGFKRDKD--SLRLVVEKLCENGYASYAE 219
T + + L + G L + M D YG K S ++++ LC++ A
Sbjct: 419 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 478
Query: 220 KLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+L ++ A I PD LI G+C+ GK ++AK L EM G + + ++D
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID-- 536
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC+K EA K+L + G +V T L+ LC R A +LF +M +
Sbjct: 537 -MLCKKGKVI----EANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQK 591
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS--AGYAIGKK----DYYEFLTRLCG 392
GC PN T L+K L Q+ + E+ M S + Y I K Y + LC
Sbjct: 592 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK 651
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
R ++A +F++MK G PD +Y L+ +C + A LF+E V GV+
Sbjct: 652 CGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQ 706
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 129/292 (44%), Gaps = 19/292 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANE 228
ID L + G+ + E + + G D + +V+ LC S A +L +K
Sbjct: 535 IDMLCKKGKVIEANKLLEVVIQR-GCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 593
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG------TVAYNCILDCVSKLC 282
P+ C L+KG C G + A L + M G ++Y+ I+D + K C
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK-C 652
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++D EA ++ +M+ GV +V ++ LI C+ + +DA LF M + G
Sbjct: 653 GRED------EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQ 706
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ TTF VLI L + +V E +E+++ M G Y + LC +RI +A +
Sbjct: 707 PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 766
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN----GVEVKP 450
F KM+ G PD TY LM C + A L + + + G KP
Sbjct: 767 FMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 818
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 132/338 (39%), Gaps = 59/338 (17%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD---YGFKRDKD--SLRLVVEKLCENGYASYAE 219
T + + L + G L + M D YG K S ++++ LC++ A
Sbjct: 126 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 185
Query: 220 KLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+L K+ A + PD LI G+C GK ++AK L EM G + ++D
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLID-- 243
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
C++ EA ++L M + G ++ T++ LI LC R +A +LF M +
Sbjct: 244 -MFCKEGKVI----EANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 298
Query: 339 WGCHPNETTFLVLIKSLYQAARVG------------------------------------ 362
GC P+ + L+K L Q ++
Sbjct: 299 LGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILC 358
Query: 363 ------EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
E +E+++ M G + Y + LC RI +A +F M+ G PD+
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 418
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAV----RNGVEVKP 450
TY LM C ++ A L E + R G++ KP
Sbjct: 419 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 456
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 132/313 (42%), Gaps = 17/313 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G+ + E M + G D + +++ LC S A L
Sbjct: 61 IDILCKEGKVIEANELLEVMIQR-GCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG 119
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT------VAYNCILDCVSKLC 282
PD L+KG C G ++ A +L +EM G ++Y+ I+D LC
Sbjct: 120 CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID---GLC 176
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ R + EA ++ +M+ G+ +V ++ LI C + E A LF M + G
Sbjct: 177 KD----RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQ 232
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ TT VLI + +V E +E+++ M G + Y + LC RI +A +
Sbjct: 233 PDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQL 292
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR--VDPRYL 460
F MK G PD+ Y LM C +++ A L E + + + K R V +
Sbjct: 293 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSM 352
Query: 461 KKPIAVKKGKKRE 473
I K+GK E
Sbjct: 353 LIDILCKEGKVIE 365
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 15/272 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + GR + F+ M + G D S ++ C +G A+ L + +
Sbjct: 646 IDGLCKCGREDEARELFKEM-KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 704
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LI C +GK+ EA L M + G TV Y + V LC
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL---VKGLCMND--- 758
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM----GEWGCH-- 342
R+ SEA ++ + M+ G +V T+ L+ LC+ + A++L +M G++G +
Sbjct: 759 RI-SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 817
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ ++ ++I L + R E E+ MK+ G Y + C ++E A +
Sbjct: 818 PDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHL 877
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
F +M G ++ TY +++ +C ++DKA
Sbjct: 878 FNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 16/231 (6%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK------LC 282
+FPD ++LI C +++E + R G+ V Y+ D + LC
Sbjct: 6 LFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILC 65
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++ EA ++L M G ++ T++ LI LC R +A LF M + GC
Sbjct: 66 KEGKVI----EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCR 121
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRM--KSAGYAIGKK----DYYEFLTRLCGIERI 396
P+ T+ L+K L Q + ++ M + Y I K Y + LC R
Sbjct: 122 PDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE 181
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++A +F++MK G PD +Y L+ +C + +KA LF+E + G++
Sbjct: 182 DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQ 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 19/292 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G+ + E M + G D + +++ LC S A L
Sbjct: 354 IDILCKEGKVIEANELLEVMIQR-GCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG 412
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT------VAYNCILDCVSKLC 282
PD L+KG C G ++ A +L +EM G ++Y+ I+D LC
Sbjct: 413 CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID---GLC 469
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ R + EA ++ +M+ G+ +V ++ LI C + E A LF M + G
Sbjct: 470 KD----RREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 525
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ TT VLI L + +V E +++++ + G + + LC RI +A +
Sbjct: 526 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN----GVEVKP 450
F KM+ G P+ T LM C + A L + + G+ KP
Sbjct: 586 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 637
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 9/246 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S I R+G+ F M D G + D + ++++ LC+ G A +L++
Sbjct: 678 TSLIHGFCRSGKWKDAKYLFNEM-VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMI 736
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
P+ L+KG C++ ++ EA +L +M + G V Y ++ + + K
Sbjct: 737 QRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIK 796
Query: 286 DPFRLDSEAEKVLLDMEYNGV--PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
L +K+L D G +V +++++I LCK R ++A +LF M G P
Sbjct: 797 TALELH---KKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 853
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ LI ++ ++ + + + M G + Y + C +I++A+ F
Sbjct: 854 NVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL--F 911
Query: 404 EKMKTD 409
+KM+ +
Sbjct: 912 QKMEAN 917
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 312 TFNVLISNLCKIRRSED---AIKLFYRMG------EWGCHPNETTFLVLIKSLYQAARVG 362
TFN+LI+ LC ++R + A+ R G + P+ TT +LI L + +V
Sbjct: 12 TFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVI 71
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E +E+++ M G + Y + LC RI +A +F M+ G PD+ TY LM
Sbjct: 72 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 131
Query: 423 TKWCAHNRVDKANALFDEAV----RNGVEVKP 450
C ++ A L E + R G++ KP
Sbjct: 132 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 163
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 175/447 (39%), Gaps = 45/447 (10%)
Query: 44 PFSSKPT---SNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLV 100
PFSS T + P+ DP + LS N + +P L + +TP+
Sbjct: 19 PFSSTSTLLHTPPEAESDPSHLPHHLLSILSKPNWQNNP-----SLKSLLPAITPSHVSS 73
Query: 101 QSTLNFSPEAGRAILGFNHWLTQNANFSH-TDETLSFFTDYFGRRKDFKAIHDFLVDNKE 159
+LN P L F++W++Q NF H D S T L+D+ +
Sbjct: 74 LFSLNLDPHTA---LQFSYWISQTPNFKHNVDSYASLLT---------------LIDHHK 115
Query: 160 VLG--PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY 217
++ PK + S I A V +M +D K ++ L G
Sbjct: 116 IVSDVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDE 175
Query: 218 AEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
+L + E D +L+I +C G + EAK+ +M + G + Y
Sbjct: 176 MNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGL---SPDYFTSTS 232
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ CR KD +DS A +V +M RN ++N LI LC+ R ++A+ LF RM
Sbjct: 233 FILGYCRSKD---VDS-AFRVFEEMP----NRNEVSYNQLIHGLCEAGRIDEAVSLFVRM 284
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ C+PN T+ LIK L + V + ++D M Y + C +
Sbjct: 285 KDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHL 343
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
+ A + MK G PD TY + C NRV++A LFD GV Y V
Sbjct: 344 DSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSV- 402
Query: 457 PRYLKKPIAVKKGKKRETLPEKMARKR 483
+ V K + L EKM K
Sbjct: 403 --LIDGYCKVGKVDEAGCLFEKMLSKN 427
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 122/302 (40%), Gaps = 33/302 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L AGR + + F RM+ D + + + +++ LC L + +
Sbjct: 265 IHGLCEAGRIDEAVSLFVRMKDDCCYP-NVYTYTALIKGLCRKNVHKAMGLLDEMLERNL 323
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD + LI G C G LD A RL M G Y C +D + K R ++ R
Sbjct: 324 VPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARR 383
Query: 290 L-DSEAEK----------VLLD-----------------MEYNGVPRNVETFNVLISNLC 321
L DS E+ VL+D M N TFN LI LC
Sbjct: 384 LFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLC 443
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
++A+ LF +M + G P TF +LI + + + + + +M S+G +
Sbjct: 444 SAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVAR 503
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW----CAHNRVDKANAL 437
Y F+ C ++++A + +MK +G PD TY L+ + ++ D ++
Sbjct: 504 TYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM 563
Query: 438 FD 439
FD
Sbjct: 564 FD 565
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 189/489 (38%), Gaps = 73/489 (14%)
Query: 13 LLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPF--------SSKPTSNPKTID------- 57
LL PP P P H L+ LSKP S P P +
Sbjct: 26 LLHTPPEAESDPSHL------PHHLLSILSKPNWQNNPSLKSLLPAITPSHVSSLFSLNL 79
Query: 58 DPDQVIARSLSGELLENLEADPLPISQRLHLIFSH--VTPTPSLVQSTLNFSPEAGRAIL 115
DP + S N + + + L LI H V+ P ++ S + A A+
Sbjct: 80 DPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKIIVSMIKCCYSAPDALF 139
Query: 116 -------------------GFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI----HD 152
+N LT A F DE +T+ ++F ++ +
Sbjct: 140 VSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEML---EEFVSMDIYTFN 196
Query: 153 FLVDNKEVLG-PKTLASCIDRLVRAG-------RPTQVLGFFERMERDYGFK-------R 197
+++ +G K + ++++AG + +LG+ + D F+ R
Sbjct: 197 LMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR 256
Query: 198 DKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
++ S ++ LCE G A L V+ + +P+ LIKG C + +A L
Sbjct: 257 NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLL 315
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM + YN + ++ CR LDS A ++L M+ G+ + T+
Sbjct: 316 DEMLERNLVPDLITYNSL---IAGQCRAG---HLDS-AYRLLSLMKERGLVPDQRTYGCF 368
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I LCK R E+A +LF + E G N + VLI + +V E + ++M S
Sbjct: 369 IDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNC 428
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ + + LC +++A+S+F++M G P T+++L+ + D A+
Sbjct: 429 SPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHK 488
Query: 437 LFDEAVRNG 445
+ + +G
Sbjct: 489 CLQKMMSSG 497
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+ME +G + + + LIS +CK+ A+KL +M + G P+E F +I +
Sbjct: 626 EMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQ 685
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDGHNPDSE 416
+ GE +++ M +G++ T +CG+ E+ SVF+K++ G+N D
Sbjct: 686 KYGEAANIVEDMICSGHS---PQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEI 742
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ +L+ V++ + LF+E +NG P+ Y +
Sbjct: 743 AWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSI 781
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 40/314 (12%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV- 222
+T ID L ++ R + F+ + + G + ++++ C+ G A L
Sbjct: 363 RTYGCFIDFLCKSNRVEEARRLFDSLTEE-GVSANVIMYSVLIDGYCKVGKVDEAGCLFE 421
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD------ 276
K + P+ + LI G C G L EA L +M + G + +N ++
Sbjct: 422 KMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQG 481
Query: 277 -------CVSKL--------CRKKDPF-------RLDSEAEKVLLDMEYNGVPRNVETFN 314
C+ K+ R + F EAE +++ M+ GVP + T+
Sbjct: 482 DFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYT 541
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE--GDEMIDRMK 372
LI K+ + A + M + C P+ TFL LIK L+ V E G+ ++ +
Sbjct: 542 SLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVS 601
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G G + + + + + +FE+M+ G PDS+ Y+ L++ C +
Sbjct: 602 NFGDVPG--------SNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLG 653
Query: 433 KANALFDEAVRNGV 446
A L D+ + G+
Sbjct: 654 IALKLLDQMQKEGI 667
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 124/297 (41%), Gaps = 24/297 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVK 223
T + I L AG + L F++M + G K + +++ ++ + G A K L K
Sbjct: 434 TFNALIHGLCSAGNLKEALSLFDQMVK-MGLKPTVYTFNILIGRMLKQGDFDDAHKCLQK 492
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P + + I+ +C GK+ EA+ + +M G Y ++ KL
Sbjct: 493 MMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGL 552
Query: 284 KKDPFRL-----DSEAE----------KVLLDMEY-------NGVPRNVETFNVLISNLC 321
F + D++ E K L D Y GV +V SN+
Sbjct: 553 TYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMW 612
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K+ + I+LF M + GC P+ + LI + + +G +++D+M+ G + +
Sbjct: 613 KMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEM 672
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ ++ C +++ +A ++ E M GH+P E L+ ++ N++F
Sbjct: 673 VFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVF 729
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A K+L M+ G+ + FN +IS CK+++ +A + M G P LI
Sbjct: 655 ALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLIC 714
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
LY+ G+ + +++ GY + + + + +E+ +FE+M+ +G N
Sbjct: 715 GLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNF 774
Query: 414 DSETYDLLMTK 424
TY +L K
Sbjct: 775 SPRTYSILTQK 785
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 177/436 (40%), Gaps = 56/436 (12%)
Query: 58 DPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGF 117
DPD A + L ++ I LH ++ T LV L R F
Sbjct: 81 DPDGETALEVQNLLKTYRDSSVSEIEGALHQ--CRLSLTDDLVLDVLKRHRSDWRPAYVF 138
Query: 118 NHWLTQ---NANFSHTDETLSFFTDYFGRRKDFK---AIHDFLVDNKEVLGPKTLASCID 171
+W ++ + +S + D GR + F + D + K + +T ++
Sbjct: 139 FNWASRCGXESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLN 198
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
R A + + + F + + GF+ D + + ++ LC + AE L NE P
Sbjct: 199 RYAAAHKTEEAVKIFYK-RKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPP 257
Query: 232 DDKICDLLIKGWCVDGKLDEAKR-----------------------------------LA 256
D K ++++ GWCV G L EAKR L
Sbjct: 258 DIKSMNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLF 317
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M+ G NCI+D LC KK R+ EA +VL +M +V T+N L
Sbjct: 318 QAMWEKGCNPDVAICNCIIDA---LCFKK---RI-PEALEVLREMNERDCQPDVATYNSL 370
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I +LCKI+R E +L M + GC PN T+ L+KS + V +++RM+ G
Sbjct: 371 IKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEV---PGILERMERNGC 427
Query: 377 AIGKKDYYEFLTRLCGIERIEQAM-SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ D Y + +L E + S ++M+ +G PD TY +++ R+D A
Sbjct: 428 RMN-SDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDAL 486
Query: 436 ALFDEAVRNGVEVKPK 451
+ F + G+ +P+
Sbjct: 487 SYFKQMTLMGMVPEPR 502
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+++ +L+ + K +EA ++ + GFEL +A+ +L LCR K
Sbjct: 189 NERTFGVLLNRYAAAHKTEEAVKIFYKRKGLGFELDLIAFQTLL---MSLCRYKH----- 240
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
E + L + N P ++++ NV+++ C + +A + + + C P++ T+ +
Sbjct: 241 VEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIF 300
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I SL +A ++ ++ M G + LC +RI +A+ V +M
Sbjct: 301 INSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDC 360
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
PD TY+ L+ C R +K L D+ + G + Y + KKP V
Sbjct: 361 QPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEV 415
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 7/234 (2%)
Query: 213 GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
G+ AE+LV++ + + L+ GWC GKLDEAK + M L V +N
Sbjct: 169 GHVLTAEQLVEELQPRLPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFN 228
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+L R +D F L + ME G P N ++ LI L R ++A+++
Sbjct: 229 TLLAGFVAEGRFEDAFELAGQ-------MEQRGCPPNAVSYTTLIQGLGARGRVDEAMRV 281
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M GC P+ T+ L+ + +A ++ +G E +D M G + Y+ F
Sbjct: 282 FVEMRRKGCAPDAVTYGTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEK 341
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E++E+ + + E+M+ PD + Y++++ C +A L++E G+
Sbjct: 342 KEQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGL 395
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 175/422 (41%), Gaps = 41/422 (9%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S + +P +V++ L AG F W + N++H+ + + + ++ +
Sbjct: 37 SGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIM 96
Query: 151 HDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
D + + + ++L +T + + R+ + + + F ME+ Y + + ++
Sbjct: 97 WDLVNKMRSLKILNVETFCIIMRKYARSQKVKEAVYTFNIMEK-YDVPPNLAAFNSLLSA 155
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
LC++ A+++ ++ PD K +L++GW L +A+ + REM G +
Sbjct: 156 LCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDI 215
Query: 269 VAYNCILDCVSKLCRKKDPF----RLDS------------------------EAEKVLLD 300
V Y ++D + K R + +DS +A LD
Sbjct: 216 VTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLD 275
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME N + +V +N LI CK+ + ++A ++ M G PN T +++ SL
Sbjct: 276 MERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGD 335
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSETYD 419
E + RM D Y + ++ C +++E A+ V++ M+ P T+
Sbjct: 336 TDEAFRVFRRMIKV--CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFS 393
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKR--ETLPE 477
+L+ C KA L +E + G ++P K + +K+G++ E L E
Sbjct: 394 VLINGLCKKGNASKACILLEEMIEKG--IRPSSVTFGKL---KQLLIKEGREDVLEFLQE 448
Query: 478 KM 479
KM
Sbjct: 449 KM 450
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 8/278 (2%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I+ V GR + G D + ++ LC+ GY A +L+ +
Sbjct: 378 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +LI +C +G+L+EA+ + EM G L V YNC+ +S LC+ +
Sbjct: 438 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL---ISALCKDEKV- 493
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A + DM G ++ TFN LI LCK+ + E+A+ L+ M G N T+
Sbjct: 494 ---QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 550
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + + E ++++ M G + Y + LC IE+ +++FE M +
Sbjct: 551 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 610
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G NP++ + ++L+ C + A + + G+
Sbjct: 611 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 648
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 19/304 (6%)
Query: 153 FLVDNKEVLGPKTLASC----------IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+LV +E++ + C IDR + GR + + M G +
Sbjct: 422 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNAVGY 480
Query: 203 RLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ LC++ A + D +++ PD + LI G C K +EA L ++M
Sbjct: 481 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 540
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G T+ YN + + R+ EA K++ DM + G P + T+N LI LC
Sbjct: 541 EGVIANTITYNTL---IHAFLRRGAM----QEALKLVNDMLFRGCPLDDITYNGLIKALC 593
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ E + LF M G +PN + +LI L + + E + M G
Sbjct: 594 RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 653
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + LC R ++A+++F+K++ +G PD+ TY+ L++ C D A+ L
Sbjct: 654 TYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 713
Query: 442 VRNG 445
V +G
Sbjct: 714 VDSG 717
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 14/286 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L + GR +VL G D ++ + LC+ A KLV
Sbjct: 277 IHALSKVGRVNEVL-KLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG 335
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F P+ +L+ G C GK+DEA+ L ++ V +N +++ + R
Sbjct: 336 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPN----VVLFNTLIN--GYVSRG---- 385
Query: 289 RLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RLD EA+ V+ + M G ++ T+N LI LCK A +L M GC PN T
Sbjct: 386 RLD-EAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 444
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +LI + R+ E ++D M G A+ Y ++ LC E+++ A+++F M
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 504
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ G PD T++ L+ C N+ ++A L+ + + GV Y
Sbjct: 505 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 550
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 17/280 (6%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF + + +++ LC G A L+ N P+ + + LI G+ G+LDEAK
Sbjct: 335 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN---PNVVLFNTLINGYVSRGRLDEAK 391
Query: 254 RLARE-MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ E M G YN + + LC+K A +++ +M+ G NV T
Sbjct: 392 AVMHESMLSVGCGPDIFTYNTL---ILGLCKKGYLV----SARELMNEMQIKGCEPNVIT 444
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +LI CK R E+A + M G N + LI +L + +V + M M
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 504
Query: 373 SAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
S G K D + F + LC + + E+A+ +++ M +G ++ TY+ L+ +
Sbjct: 505 SKGC---KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 561
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+ +A L ++ + G + Y + L + ++KG
Sbjct: 562 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 601
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 13/261 (4%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
F+ G+ D ++++KL G + L+ E I + + L++K +
Sbjct: 115 LFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHY 174
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTV--AYNCILDCV-SKLCRKKDPFRLDSEAEKVLLD 300
G +A RL +M RG + +YN +LD + + C K P V +
Sbjct: 175 GRAGLPGQATRLLLDM-RGVYSCEPTFRSYNVVLDVLLAGNCPKVVP--------NVFYE 225
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ V TF V++ LC + + A L M GC PN + LI +L + R
Sbjct: 226 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGR 285
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E ++++ M G + + + LC + RI +A + ++M G P+S TY +
Sbjct: 286 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 345
Query: 421 LMTKWCAHNRVDKANALFDEA 441
LM C +VD+A L ++
Sbjct: 346 LMHGLCRMGKVDEARMLLNKV 366
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + + + LG ++ M + G + + ++ G A KLV D
Sbjct: 514 TFNSLIFGLCKVNKFEEALGLYQDMLLE-GVIANTITYNTLIHAFLRRGAMQEALKLVND 572
Query: 225 TANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P DD + LIK C G +++ L +M G ++ N + ++ LCR
Sbjct: 573 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL---INGLCR 629
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A + L DM + G+ ++ T+N LI+ LCK R+++A+ LF ++ G P
Sbjct: 630 TGNI----QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 685
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+ T+ LI + + ++ R +G+ + +Y ++
Sbjct: 686 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 730
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 120/327 (36%), Gaps = 48/327 (14%)
Query: 119 HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVR 175
W + H + D G +FK L+ K+ V + R
Sbjct: 117 QWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGR 176
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI 235
AG P Q M Y CE + SY + +
Sbjct: 177 AGLPGQATRLLLDMRGVYS---------------CEPTFRSY---------------NVV 206
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
D+L+ G C + EM G + ++ LC + +DS A
Sbjct: 207 LDVLLAGNCPK----VVPNVFYEMLSKGISPTVYTFGVVM---KALCLVNE---VDS-AC 255
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+L DM +G N + LI L K+ R + +KL M GC P+ TF I L
Sbjct: 256 ALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 315
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ R+ E +++DRM G+ Y + LC + ++++A + K+ NP+
Sbjct: 316 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNV 371
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAV 442
++ L+ + + R+D+A A+ E++
Sbjct: 372 VLFNTLINGYVSRGRLDEAKAVMHESM 398
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 145/370 (39%), Gaps = 48/370 (12%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQV 182
NF H+ + G + F + D L+ K + P + I+ A P Q
Sbjct: 42 NFKHSYSSFHILILKLGWARQFSLMQDLLMRLKSEQYSINPSLFSDIIEIYGEANLPDQA 101
Query: 183 LGFFERM-----------------------------------ERDYGFKRDKDSLRLVVE 207
L F M YG D S +++
Sbjct: 102 LKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMS 161
Query: 208 KLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
C NG S A L ++ PD + +L++G C +++ A L +M G+
Sbjct: 162 AFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVP 221
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
++Y +L+ LCRKK EA K+L M+ G ++ +N +I C+ R
Sbjct: 222 DALSYTTLLN---SLCRKKKL----KEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRX 274
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
DA K+ M GC PN ++ L+ L E ++ M S G++ ++
Sbjct: 275 LDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHAL 334
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ C + ++E+A V +M G +ET+ ++ + C +++ + +FDE ++ +
Sbjct: 335 INGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDEXLK--L 392
Query: 447 EVKPKEYRVD 456
E+ P V+
Sbjct: 393 EITPNTRLVE 402
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 122/278 (43%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
ID L +AG+ + F+RM D G + +V+ +C A +L K +
Sbjct: 192 IDGLAKAGKLNEAYKLFQRM-LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P ++LI C GKLDEA RL + M G V Y+ ++ + + R D
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD-- 308
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A +L DM V T N LI LCK R ++A ++ M G P+ T+
Sbjct: 309 -----ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ +A + E++ M + G A Y ++ LC R+ +A VF +MK+
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P+ TY L+ +C+ +VD LF E V G+
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 129/303 (42%), Gaps = 30/303 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID L +AG+ F+++ G + ++ LC A +L D
Sbjct: 17 IDGLAKAGKLNDARNLFQKLLHS-GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + +++I C G L+EA L ++M G V YN ++D + K R ++
Sbjct: 76 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 135
Query: 289 RLDSEAEK----------------------------VLLDMEYNGVPRNVETFNVLISNL 320
L +E E+ V +ME +P + ++ +LI L
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGL 195
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K + +A KLF RM + G P+ T+ V+I + A + E E+ M+S G +
Sbjct: 196 AKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + C ++++A + ++M DGH PD TY L++ C+ RVD A L ++
Sbjct: 256 FTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Query: 441 AVR 443
V+
Sbjct: 316 MVK 318
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 7/227 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LI G GKL++A+ L +++ G TVAY + + LC + F
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL---IHGLC-MANSF 61
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A ++ DM G P + T+NV+I CK E+A L +M E G P+ T+
Sbjct: 62 ---DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTY 118
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ L +++RV E + + M+ G ++ + + LC +I+QA VF +M+
Sbjct: 119 NTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PDS +Y +L+ ++++A LF + +G+ Y V
Sbjct: 179 KDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNV 225
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 125/284 (44%), Gaps = 9/284 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T ID + G + ++M D G D + V++ LC++ A L
Sbjct: 80 PVTYNVMIDASCKRGMLEEACDLIKKMIED-GHVPDVVTYNTVMDGLCKSSRVEEALLLF 138
Query: 223 KDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ P+ + + +I G C K+D+A ++ EM + +Y ++D ++K
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKA 198
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+ +EA K+ M +G+ + T+NV+I +C ++A++LF M GC
Sbjct: 199 GKL-------NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ TF +LI + + ++ E ++ RM G+ Y ++ LC I R++ A
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ E M P T + L+ C R+ +A + D V +G
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 47/110 (42%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E P+ ++ +LI L +A ++ + + ++ +G Y + LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ A +F M G P TY++++ C +++A L + + +G
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 110
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 138/307 (44%), Gaps = 21/307 (6%)
Query: 143 RRKDFK-AIHDFLVDNKEVLGPKTLASC---IDRLVRAGRPTQVLGFFERMERDYGFKRD 198
RR D + AI LV++ L P C I +L +GR + E D
Sbjct: 68 RRGDLEEAIR--LVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLASCEPDV----- 120
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
S +V C G A +LV E PD + LI+G C G+ D A + +
Sbjct: 121 -MSYNAMVAGYCVTGQLDNARRLVAAMPME--PDTYTYNTLIRGLCGRGRTDNALAVLDD 177
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M R G V Y +L+ K K +A K+L +M G ++ T+NV+++
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYK-------QAVKLLDEMRDKGCAPDIVTYNVVVN 230
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
+C+ R +DA++ + +GC PN ++ +++K L A R + ++++ M G
Sbjct: 231 GICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPP 290
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ ++ LC +E AM + +++ G P+S +Y+ ++ +C ++D+A A
Sbjct: 291 NVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 350
Query: 439 DEAVRNG 445
+ V +G
Sbjct: 351 ELMVSSG 357
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 133/279 (47%), Gaps = 9/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L GR L + M R G D + +++E C+ A KL+ + ++
Sbjct: 159 IRGLCGRGRTDNALAVLDDMLRR-GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG 217
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD ++++ G C +G++D+A + + G E TV+YN +L + R +D
Sbjct: 218 CAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWED-- 275
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
AEK++ +M G P NV TFN+LIS LC+ E A+++ ++ ++GC PN ++
Sbjct: 276 -----AEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSY 330
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ + + ++ ++ M S+G Y LT LC ++ A+ + ++K
Sbjct: 331 NPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 390
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G P +Y+ ++ + ++A L +E V G++
Sbjct: 391 KGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQ 429
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 145/313 (46%), Gaps = 11/313 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + + GR + F + + YG + + S +V++ LC AEKL+ + + +
Sbjct: 229 VNGICQEGRVDDAMEFLKSLP-SYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKG 287
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + + ++LI C G ++ A + ++ + G +++YN IL C++K
Sbjct: 288 RPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILH---AFCKQK--- 341
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D V L M +G ++ ++N L++ LC+ + A++L +++ + GC P ++
Sbjct: 342 KMDRAMAFVEL-MVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISY 400
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L +A + E E+++ M + G Y + LC RIE+A+ F K++
Sbjct: 401 NTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQD 460
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
G P++ Y+ ++ C A LF V NG Y + L VK+
Sbjct: 461 MGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKE 520
Query: 469 GKKRETLPEKMAR 481
RE + E +R
Sbjct: 521 A--REMMAELCSR 531
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC---- 236
+ + F E M G D S ++ LC G A +L+ DK C
Sbjct: 345 RAMAFVELMVSS-GCYPDIVSYNTLLTALCRGGEVDAAVELLHQL------KDKGCTPVL 397
Query: 237 ---DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ +I G GK +EA L EM G + + Y+ I S LCR+ R++ E
Sbjct: 398 ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI---SSGLCREG---RIE-E 450
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A K ++ G+ N +N ++ LCK R + AI LF M GC PNE+T+ +LI+
Sbjct: 451 AIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIE 510
Query: 354 SLYQAARVGEGDEMIDRMKSAG 375
L V E EM+ + S G
Sbjct: 511 GLAYEGLVKEAREMMAELCSRG 532
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G L+EA RL M G E L + KLC +EA +VL E
Sbjct: 70 GDLEEAIRLVESM--AGLEPSAAGPCAAL--IKKLCASGR----TAEARRVLASCE---- 117
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V ++N +++ C + ++A +L M P+ T+ LI+ L R
Sbjct: 118 -PDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTLIRGLCGRGRTDNALA 173
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++D M G Y L C +QA+ + ++M+ G PD TY++++ C
Sbjct: 174 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGIC 233
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRR 484
RVD A G E Y + LK ++ + E L +M+RK R
Sbjct: 234 QEGRVDDAMEFLKSLPSYGCEPNTVSYNI---VLKGLCTAERWEDAEKLMAEMSRKGR 288
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 11/294 (3%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
+ T + I+ LV+AG Q + + G D + +V L +N A
Sbjct: 222 VSAATFSILINGLVKAGMMIQAHSLAQETTTN-GCTIDIHTYTAIVNWLAKNKKIQEAVA 280
Query: 221 LV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L+ K TAN P + L+ G C G+L+EA L R++ G V Y ++D +
Sbjct: 281 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 340
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K +K F EA K+ +M G+ + + LI L + + A ++ M
Sbjct: 341 K---EKRSF----EAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH 393
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
GC P+ T +I L +A R+G + M++ G A + Y + LC +++ A
Sbjct: 394 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 453
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ + +MK PD+ TY++L+ C V+ A A FDE + G KP Y
Sbjct: 454 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG--CKPDVY 505
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 131/316 (41%), Gaps = 10/316 (3%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDN-KEVLGP--KTLASCIDRLVRAGRPTQV 182
F H+ T + D F R K + + L + + P +T I A P +
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKG 242
ME D+G + LV+ LC++G A + + +LI G
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILING 233
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
G + +A LA+E G + Y I++ ++K KK EA ++ +
Sbjct: 234 LVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAK--NKK-----IQEAVALMEKIT 286
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
NG + T+N L++ LCK+ R E+AI L ++ + GC P+ T+ LI L + R
Sbjct: 287 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF 346
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E ++ M S G A+ Y + L +I QA SV++ M + G PD T ++
Sbjct: 347 EAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 406
Query: 423 TKWCAHNRVDKANALF 438
R+ A +F
Sbjct: 407 DGLSKAGRIGAAVRIF 422
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 134/318 (42%), Gaps = 16/318 (5%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VDN T S ID L + R + F+ M G D ++ L + G
Sbjct: 320 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA-SRGLALDTVCYTALIRGLLQTG 378
Query: 214 YASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A + K T++ PD +I G G++ A R+ + M G V Y+
Sbjct: 379 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 438
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+ + LC+ + ++D E +L M+ + T+N+LI LCK E A
Sbjct: 439 AL---IHGLCKAR---KMDCALE-MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 491
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M E GC P+ T+ +LI L +A ++D M S+ + Y + LC
Sbjct: 492 FDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCK 546
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
++E +F +M+ G +S+T L+ C NRVD+A +LF+ + G+ P
Sbjct: 547 SGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYA 604
Query: 453 YRVDPRYLKKPIAVKKGK 470
Y L K V +G+
Sbjct: 605 YNSIISALIKSGKVNEGQ 622
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 25/286 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVK 223
TL++ ID L +AGR + F+ ME G ++ ++ LC+ A E L +
Sbjct: 401 TLSTMIDGLSKAGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDCALEMLAQ 459
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD ++LI G C G ++ A+ EM G + YN + +S LC+
Sbjct: 460 MKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL---ISGLCK 516
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A VL DM + ++ L+ LCK + E LF+ M G
Sbjct: 517 AGNT----DAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSGV-A 566
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG----YAIGKKDYYEFLTRLCGIERIEQA 399
N T LI L +A RV E + + ++ G YA Y ++ L ++ +
Sbjct: 567 NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYA-----YNSIISALIKSGKVNEG 621
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+V+++M T PD TY+ L+ NR+D+A+ + E G
Sbjct: 622 QAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG 666
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 20/275 (7%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDE 251
+GF+ + +++ A L+K+ IF PD + ++LI G+C+ + +E
Sbjct: 113 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEE 172
Query: 252 AKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY-----NG 305
A + REM G +N +L LC+ + KVL M++
Sbjct: 173 AFAVIREMEEDFGVAPSLKTHNLVLH---GLCK----------SGKVLAAMDHFEAVRRS 219
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P + TF++LI+ L K A L GC + T+ ++ L + ++ E
Sbjct: 220 MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAV 279
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+++++ + G Y L LC + R+E+A+ + K+ +G PD TY L+
Sbjct: 280 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 339
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
R +A LF E G+ + Y R L
Sbjct: 340 GKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 374
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 9/283 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I L +AG+ + F M++ GF D + VV+ C++G A +++++
Sbjct: 573 IHGLTKAGQARETSSIFHAMKQQ-GFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P +I G +LDEA L E G EL + Y+ ++D K+ R
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI---- 687
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA +L +M G+ NV T+N L+ L K +A+ F M E C PN T+
Sbjct: 688 ---DEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTY 744
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + + + M+ G Y + L + I A S+FE+ K
Sbjct: 745 SILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKA 804
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+G PD+ +++ L+ NR +A +F+E G + K
Sbjct: 805 NGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVK 847
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 133/334 (39%), Gaps = 34/334 (10%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
CID +AG FF + + G K D S ++ LC+ G S AE+L E
Sbjct: 258 CIDCFGKAGNVDMAWKFFHEL-KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETE 316
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P + +I G+ G+ + A +L ++ G V++N IL C+ K + +
Sbjct: 317 RAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEA 376
Query: 288 FRL----------DSEAEKVLLD-----------------MEYNGVPRNVETFNVLISNL 320
L +S +++D ME+ G+ N+ T N+++ L
Sbjct: 377 LTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRL 436
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK ++ E A ++F + GC+PN T+ LI L + V + + + M G+
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + R E +F++M G PD + M V+K A+F++
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
G + Y + L K G+ RET
Sbjct: 557 IKGYGFLPDVRSYSILIHGL-----TKAGQARET 585
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 133/337 (39%), Gaps = 58/337 (17%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDL 238
+ L FE M++D + + + ++++ LC G A +++D +FP+ ++
Sbjct: 375 EALTLFEAMKKDA--EPNSSTYNIIIDMLCMAGKVEEA-YMIRDEMEHAGLFPNLLTVNI 431
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
++ C K + A + + G +V Y ++D + K D +RL +
Sbjct: 432 MVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFEN----M 487
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET------------ 346
LD +N P + LI N R ED K+F M GC P+ T
Sbjct: 488 LDTGHNANPV---VYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKA 544
Query: 347 -----------------------TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
++ +LI L +A + E + MK G+A+ + Y
Sbjct: 545 GDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAY 604
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C ++++A V E+MK P TY ++ +R+D+A LF+EA
Sbjct: 605 NAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 664
Query: 444 NGVEVKPKEY-----------RVDPRYLKKPIAVKKG 469
G+E+ Y R+D YL +KKG
Sbjct: 665 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 701
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L++ +G+++ A L E+ E V YN +DC K +D A K
Sbjct: 223 LVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGK------AGNVDM-AWKFF 275
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+++ G+ + ++ +I LCK R +A +LF +M P + +I A
Sbjct: 276 HELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSA 335
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ +++D++K G + LT L ++++A+++FE MK D P+S TY
Sbjct: 336 GQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAE-PNSSTY 394
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
++++ C +V++A + DE G+
Sbjct: 395 NIIIDMLCMAGKVEEAYMIRDEMEHAGL 422
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 84/210 (40%), Gaps = 7/210 (3%)
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C L+ +LD+A+R+ M R F AY + + + + P R A
Sbjct: 150 CADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVL---IGAMAEARQPER----AL 202
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++L M+ G V F L+ L + R E A+ L + P+ + V I
Sbjct: 203 ELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCF 262
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+A V + +KS G Y + LC R+ +A +F +M+T+ P +
Sbjct: 263 GKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCA 322
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
Y+ ++ + + + + A L D+ G
Sbjct: 323 YAYNTMIMGYGSAGQFENAYKLLDQLKERG 352
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
EKVL +M G L+S L + RR +DA ++ M P + + VLI +
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ +A + E++ +M+ GY +G + + L R+E A+++ +++K PD
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPD 251
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
Y++ + + VD A F E G++
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLK 284
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 148/343 (43%), Gaps = 46/343 (13%)
Query: 141 FGRRKDFKAIHDFLVDNKE--VLGPK-TLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
GRRK F + D L D + + G L+ +D VRAG ++ + F ++ D G +R
Sbjct: 120 LGRRKFFDFMMDALCDMRRNAIDGDLFMLSVVVDSFVRAGHVSRAIQVFGNLD-DLGVRR 178
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
D ++L +++ LC + A ++ ++ D + + GW G++ E +R+ R
Sbjct: 179 DTEALNVLLLCLCRRSHVGAANSVLNSMKGKVDFDVGTYNAVAGGWSRFGRVSEVERVMR 238
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM G + +++ + + R+D EA ++L M+ + ET+N +I
Sbjct: 239 EMEADGLRPDCRTFGFLIEGLGR------EGRMD-EAVEILCGMKEMNCQPDTETYNAVI 291
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM------ 371
N + E+ IK + RM C PN T+ +I +A +V + M D M
Sbjct: 292 FNFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINRFLRARKVADALLMFDEMLRRGVV 351
Query: 372 -----------------------------KSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
+ G I + Y L RL + + +S+
Sbjct: 352 PSTGTITTFIKRLCSYGPPYAALMIYKKARKLGCVISMEAYKILLMRLSMVGKCGTLLSI 411
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+E+M+ G++ D E Y+ +++ C +++ A + +EA+R G
Sbjct: 412 WEEMQECGYSSDLEVYECIISGLCNVGQLENAVLVMEEALRKG 454
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L G+ +VL F++M + GF+ + + ++ LC+ G S A +L++
Sbjct: 140 TFNTLIRGLCVEGKIGEVLHLFDKMIGE-GFQPNVVTYGTLINGLCKVGSTSAAIRLLRS 198
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD + +I C D ++ +A L EM G YN ++ + LC
Sbjct: 199 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 258
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K +L +M + + NV F+ ++ LCK + +A + M + G P
Sbjct: 259 WK-------HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ L+ + + E ++ D M G+A Y + C I+RIE+AM +F
Sbjct: 312 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 371
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
E+M P++ TY LM C R+ A ALF E V G
Sbjct: 372 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 413
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S ID L + + TQ F M G + ++ LC + L+ +
Sbjct: 212 TSIIDSLCKDRQVTQAFNLFSEMIHQ-GISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 270
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N +I P+ I ++ C +GK+ EA + M + G E V YN ++D C +
Sbjct: 271 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD---GHCLRS 327
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ EA KV M G +V +++ LI+ CKI+R E A+ LF M PN
Sbjct: 328 EM----DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 383
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ L+ L R+ + + M + G Y L LC R+++A+++ +
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ +PD + Y +++ C ++ A LF G+ Y +
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 493
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 157/382 (41%), Gaps = 56/382 (14%)
Query: 102 STLNFS-PEAGRAILGFN-HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE 159
+T+ FS P +G +L H+L+ + N H+ + +F + D L
Sbjct: 11 ATIAFSSPGSGTCMLSLPPHFLSSSHNTFHS------------KSLNFNTLDDALSSFNR 58
Query: 160 VLG---PKTLASCIDRLVRAGRP---TQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN- 212
+L P ++A L+ + + VL +M+ +G + +L +++ C
Sbjct: 59 MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMD-SFGIPPNIYTLNILINSFCHLQ 117
Query: 213 --GYA-SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
G+A S K++K P+ + LI+G CV+GK+ E L +M GF+ V
Sbjct: 118 RLGFAFSVLAKILKLGHQ---PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVV 174
Query: 270 AYNCILDCVSKLCRKKDPFRL--------------------DS--------EAEKVLLDM 301
Y +++ + K+ RL DS +A + +M
Sbjct: 175 TYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEM 234
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
+ G+ ++ T+N LI LC + + L M PN F ++ +L + +V
Sbjct: 235 IHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 294
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E +++D M G Y + C +++A+ VF+ M G PD +Y L
Sbjct: 295 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 354
Query: 422 MTKWCAHNRVDKANALFDEAVR 443
+ +C R++KA LF+E R
Sbjct: 355 INGYCKIQRIEKAMYLFEEMCR 376
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 10/278 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV+ LC+ G A +V + P+ + L+ G C+ ++DEA ++ M G
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 343
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F V+Y+ +++ K+ R + L E + L +P V T++ L+ LC +
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL------IPNTV-TYSTLMHGLCHV 396
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R +DAI LF+ M G P+ ++ +L+ L + R+ E ++ ++ + + Y
Sbjct: 397 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 456
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ +C +E A +F + + G +P+ TY +++ C + +A+ LF E R
Sbjct: 457 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR 516
Query: 444 NGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
G Y + R + +G + L E +AR
Sbjct: 517 KGYSPNGCTYNLITRGFLRNNETLRGI--QLLQEMLAR 552
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ G+P N+ T N+LI++ C ++R A + ++ + G PN TF LI+ L +
Sbjct: 94 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+GE + D+M G+ Y + LC + A+ + M+ PD Y
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
++ C +V +A LF E + G+
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGIS 240
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 128/302 (42%), Gaps = 9/302 (2%)
Query: 145 KDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
K A+ + +V++K + ++ +D L + G+ + + M + G + + +
Sbjct: 260 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR-GVEPNVVTYNA 318
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C A K+ + F D + LI G+C ++++A L EM R
Sbjct: 319 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 378
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
TV Y+ ++ + + R +D L E M G + ++ +L+ LCK
Sbjct: 379 LIPNTVTYSTLMHGLCHVGRLQDAIALFHE-------MVTRGQIPDFVSYCILLDYLCKN 431
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR ++AI L + P+ + ++I + +A + ++ + S G Y
Sbjct: 432 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 491
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC + +A +F +MK G++P+ TY+L+ + +N + L E +
Sbjct: 492 TIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLA 551
Query: 444 NG 445
G
Sbjct: 552 RG 553
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N+ TFN LI LC + + + LF +M G PN T+ LI L + ++
Sbjct: 137 NIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 196
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M+ Y + LC ++ QA ++F +M G +P TY+ L+ C
Sbjct: 197 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 256
Query: 429 NRVDKANALFDEAVRNGV 446
AL +E V + +
Sbjct: 257 CEWKHVTALLNEMVNSKI 274
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ + L GR + F M G D S ++++ LC+N A L+K
Sbjct: 385 TYSTLMHGLCHVGRLQDAIALFHEMVTR-GQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + PD +I ++I G C G+L+ A+ L + G Y + ++ LC+
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIM---INGLCQ 500
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ L +EA K+ +M+ G N T+N++ + + I+L M G
Sbjct: 501 QG----LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSA 556
Query: 344 NETTFLVLIKSL 355
+ +T VL++ L
Sbjct: 557 DVSTSTVLVEML 568
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 29/213 (13%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEA 252
GF D S ++ C+ A L ++ E+ P+ L+ G C G+L +A
Sbjct: 343 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDA 402
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-----------DSEAEKVLLD- 300
L EM G V+Y +LD + K R + L D + +++D
Sbjct: 403 IALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDG 462
Query: 301 ----------------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ G+ NV T+ ++I+ LC+ +A KLF M G PN
Sbjct: 463 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 522
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
T+ ++ + + G +++ M + G++
Sbjct: 523 GCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 555
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 52/127 (40%)
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+DA+ F RM P+ F L+ S+ + + +M S G
Sbjct: 50 DDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNIL 109
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ C ++R+ A SV K+ GH P+ T++ L+ C ++ + LFD+ + G
Sbjct: 110 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGF 169
Query: 447 EVKPKEY 453
+ Y
Sbjct: 170 QPNVVTY 176
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 170/392 (43%), Gaps = 32/392 (8%)
Query: 100 VQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE 159
V TL F + +A+ FN W Q ++HT+++ + GR + +FL ++
Sbjct: 82 VLQTLGFLRDTSKALQFFN-W-AQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 160 ------VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
L + S + RAG + + F M + +G + ++ L + G
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIM-KSHGVSPSVVTFNSLLTILLKRG 198
Query: 214 YASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
+ A+K+ + + + PD ++LI+G+C++G +D+ R+ ++ R G E V Y
Sbjct: 199 RTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTY 258
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN--VETFNVLISNLCKIRRSEDA 329
N ++D LCR + A V+ M V N V T+ LI C R E A
Sbjct: 259 NTLVD---GLCRAGKV----TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKA 311
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ +F M G N T+ LIK L +A + + ++++ +AG D F T
Sbjct: 312 LAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILE--GTAGDGTFSPDTCTFNTL 369
Query: 390 L---CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR--- 443
+ C ++ A+ VFE+M PDS TY L+ C +KA L D+ +
Sbjct: 370 MHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429
Query: 444 --NGVEVKPKEYRVDP--RYLKKPIAVKKGKK 471
+G KP +P +YL + KK +K
Sbjct: 430 LLSGDGCKPLVAAYNPIFKYLCETGKTKKAEK 461
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 12/265 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDL 238
+ L FE M + G K + + +++ LCE + +++ TA + PD +
Sbjct: 310 KALAVFEEMV-NQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNT 368
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR----KKDPFRLDSEA 294
L+ C G LD+A ++ M + + Y+ + V LC+ +K LD
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSAL---VRSLCQGGHYEKAEDLLDKLL 425
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
E+ +L + +G V +N + LC+ +++ A K F ++ G + ++ LI
Sbjct: 426 ERKIL-LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMG 483
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ G E++ M + + Y + L +++ A+ EKM H P+
Sbjct: 484 HCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPN 543
Query: 415 SETYDLLMTKWCAHNRVDKANALFD 439
S T+ ++ K R ++ +L
Sbjct: 544 SSTFHSILAKLLEQGRTSESASLIQ 568
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 38/267 (14%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T S I+ L+ +P L E+M R + + + ++ KL E G S + L+
Sbjct: 510 ETYESLINGLLHMDKPLLALQSLEKMLRS-SHRPNSSTFHSILAKLLEQGRTSESASLI- 567
Query: 224 DTANEIFPDDKI-CDLLIKGWCV-----DGKLDEAKRLAREMYRGGFELGT---VAYNCI 274
++ D I +L CV G D+A +L +Y G+ + + Y C
Sbjct: 568 ----QLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLC- 622
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
CRK + K+LL + +++ N +I LC+I + +A L+Y
Sbjct: 623 ------HCRKV------IQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYY 670
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK----KDYYEFLTRL 390
++ E G H + L SL ++ E + + RM+ + + ++ +F +
Sbjct: 671 KLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEPVEMGVHQQLSCQNQLKFSLKA 730
Query: 391 CGIERIEQAMSVFEKM----KTDGHNP 413
G ++E+A SV ++M K+ NP
Sbjct: 731 GG--KLEEAESVQKRMERRLKSKNSNP 755
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 42/339 (12%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM D G + ++ + +V+ +C+ G A L++
Sbjct: 83 TFTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRK 141
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSK 280
+ + I PD I +I G DG+ +A+ L EM G V Y+C+++ C S
Sbjct: 142 MEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSG 201
Query: 281 ------------LCRKKDPFRLD--------------SEAEKVLLDMEYNGVPRNVETFN 314
L RK P + + A+ +L +M +GV NV T N
Sbjct: 202 KWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCN 261
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEW-----------GCHPNETTFLVLIKSLYQAARVGE 363
L+ LC + +DA+++F M + G P+ T+ +LI L + E
Sbjct: 262 TLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLE 321
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+E+ + M G Y + LC R+++A +F+ M + +P+ T++ L+T
Sbjct: 322 AEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLIT 381
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+C VD LF E R G+ Y R +K
Sbjct: 382 GYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRK 420
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
++ ID L + GR T F M+ D G D + ++ C +G S A++L+++
Sbjct: 156 SAIIDGLWKDGRHTDAQNLFIEMQ-DKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEML 214
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+I PD LI +G L+ A+ L +EM G V N +LD + + K
Sbjct: 215 VRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK 274
Query: 286 DPFRLDSEAEKVLLDME----YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
D + +K ++D++ +NGV +V+T+N+LIS L + +A +L+ M G
Sbjct: 275 DALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 334
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ T+ +I L + +R+ E +M D M S ++ + +T C ++ +
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+F +M G ++ TY L+ + ++ + +F E + +GV
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 22/261 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ LV+ G + M G + + +++ LC++G A ++ K
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISS-GVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 225 TA------------NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
N + PD + ++LI G +GK EA+ L EM G TV Y+
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+ ++ LC++ RLD EA ++ M N+ TFN LI+ CK +D ++L
Sbjct: 343 SM---INGLCKQS---RLD-EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F MG G N T++ LI+ + + ++ M S+G LT L
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455
Query: 393 IERIEQAMSVFE--KMKTDGH 411
E +++A+++ E +M D H
Sbjct: 456 KEELKKALAMLEELQMSMDHH 476
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++LIK +C KL A ++ + GF V +N +L LC + SEA
Sbjct: 19 NILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLL---HGLCVEDRV----SEA-- 69
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
LD+ + NV TF L++ LC+ R +A+ L RM E G PN+ T+ ++ +
Sbjct: 70 --LDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDGHNP 413
+ ++ +M+ + K D + + G+ R A ++F +M+ G P
Sbjct: 128 KMGDTVSALNLLRKMEELSHI--KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAV 442
D TY ++ +C+ + +A L E +
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEML 214
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P ++ +FN+LI C + A+ F ++ + G HP TF L+ L RV E
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ +M + + LC R+ +A+++ ++M DG P+ TY ++
Sbjct: 71 DLFHQMCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126
Query: 426 C 426
C
Sbjct: 127 C 127
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 12/209 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ G CV+ ++ EA L +M + T N LCR+ EA +L
Sbjct: 56 LLHGLCVEDRVSEALDLFHQMCKPNVVTFTTLMN-------GLCREGRVV----EAVALL 104
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKSLYQ 357
M +G+ N T+ ++ +CK+ + A+ L +M E P+ + +I L++
Sbjct: 105 DRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWK 164
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
R + + M+ G Y + C + +A + ++M +PD T
Sbjct: 165 DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVT 224
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ L+ ++ A L E + +GV
Sbjct: 225 FSGLINALVKEGDLNSAQDLLQEMISSGV 253
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 11/272 (4%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
A+ + +VD T + +D +A R + L M G + + +++
Sbjct: 279 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA-SRGCTPNVVTFNSIIDG 337
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC++ + A ++ N + DK+ ++LI G C G ++A L EM +
Sbjct: 338 LCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPD 397
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRS 326
+ + ++D LC+ EA + +LD+ N GVP NV T+NVL+ LCK R
Sbjct: 398 VMTFGALID---GLCKAGQ-----VEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRI 449
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+ + M GC P T+ L+ +L +A+R + +++ ++KS G+ Y
Sbjct: 450 EEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNIL 509
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ L + EQA++V E+M GH PDS T+
Sbjct: 510 VDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 541
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 23/323 (7%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G ++ + +H + V T + I+ L + GR + + M R + D
Sbjct: 130 GDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR-----KSCDV 184
Query: 202 LRLVV------EKLCENGYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
L ++ + LC+ + A +L ++D + + PD LI G C G+ DEA
Sbjct: 185 LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA 244
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+M GG+ V YN + V+ LC+ R A ++ M GV +V T
Sbjct: 245 CN--DDMIAGGYVPNVVTYNAL---VNGLCKADKMER----AHAMIESMVDKGVTPDVIT 295
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++VL+ CK R ++A++L + M GC PN TF +I L ++ R GE ++ ++
Sbjct: 296 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVY 355
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ K + + C EQA ++FE+M PD T+ L+ C +V+
Sbjct: 356 NRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVE 415
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A + D GV Y V
Sbjct: 416 AARDILDLMGNLGVPPNVVTYNV 438
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 139/328 (42%), Gaps = 26/328 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L + G+ + + M G+ + + +V LC+ A +++
Sbjct: 227 TFSTLIDGLCKCGQTDEACN--DDMIAG-GYVPNVVTYNALVNGLCKADKMERAHAMIES 283
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + PD +L+ +C ++DEA L M G V +N I+D + K R
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ F++ + +L VP V TFN+LI+ CK E A LF M P
Sbjct: 344 SGEAFQIALQVYNRML------VPDKV-TFNILIAGACKAGNFEQASALFEEMVAKNMQP 396
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF LI L +A +V +++D M + G Y + LC RIE+
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFL 456
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
E+M + G P+S TY L+ C +R D A L K K + DP +
Sbjct: 457 EEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVS---------KLKSFGWDPDTVTYN 507
Query: 464 IAV----KKGKKRE--TLPEKMARKRRR 485
I V K GK + T+ E+M K +
Sbjct: 508 ILVDGLWKSGKTEQAITVLEEMVGKGHQ 535
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 122/284 (42%), Gaps = 20/284 (7%)
Query: 170 IDRLVRAGRPTQVLGFFE-RMERDYGFKRDKDSLRLVVEKLCENGYASYA----EKLVKD 224
+ L RAG + L F M RD G + ++ LC++ E+LVK
Sbjct: 52 LQSLCRAGETARALEIFRGEMARD-GVAPTIVTYNTIINGLCKSNELGAGMELFEELVKR 110
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ PD + LI C G L+EA+RL M G V Y+ +++ + K+ R
Sbjct: 111 GHH---PDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF--YRMGEWGCH 342
+ L E + D V N+ T+N + LCK + +A +L R G
Sbjct: 168 DEARELIQEMTRKSCD-----VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 222
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMI-DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ TF LI L + G+ DE D M + GY Y + LC +++E+A +
Sbjct: 223 PDTVTFSTLIDGL---CKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ E M G PD TY +L+ +C +RVD+A L G
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 323
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLF-YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
R+V +N+++ +LC+ + A+++F M G P T+ +I L ++ +G G E
Sbjct: 43 RSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGME 102
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ + + G+ Y + LC +E+A + M + G P+ TY +L+ C
Sbjct: 103 LFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLC 162
Query: 427 AHNRVDKANALFDEAVRNGVEVKPK 451
R+D+A L E R +V P
Sbjct: 163 KVGRIDEARELIQEMTRKSCDVLPN 187
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
YN +L LCR + R E +M +GV + T+N +I+ LCK +
Sbjct: 48 YNIVLQ---SLCRAGETAR---ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM 101
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+LF + + G HP+ T+ LI SL +A + E + M S G Y + L
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161
Query: 391 CGIERIEQAMSVFEKM--KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
C + RI++A + ++M K+ P+ TY+ + C + +A L ++R+G
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDG 217
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 125/273 (45%), Gaps = 11/273 (4%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDD 233
+AGR V FE M G + D +++ LC G A +++ K + P+
Sbjct: 195 KAGRWECVSKVFEEMS-GRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
++LI C +G + EA L M G L V YN ++ +S + +D E
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGV------LEMD-E 306
Query: 294 AEKVLLDMEYNG--VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A +L +M + V NV TFN +I LCK R A ++ M E GC N TF +L
Sbjct: 307 AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLL 366
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L + +V + E++D M S+G Y + C + ++++A S+ KM+ DG
Sbjct: 367 IGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGI 426
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
P+ Y L+ C +++A FDE +N
Sbjct: 427 EPELVHYIPLLAALCEQGMMEQARNFFDEMHKN 459
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 10/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G K+ ++ + I PD + LI C +GK+ +A ++ +M G
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
E V YN +++ + K K+ L + +M GV + T+N LI+ L +
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRN-------NMLEKGVALDAVTYNTLITGLSGV 301
Query: 324 RRSEDAIKLFYRM--GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
++A+ L M GE PN TF +I L + R+ + ++ D M G A
Sbjct: 302 LEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLV 361
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
+ + L + ++++AM + ++M + G PDS TY +L+ +C +VD+A +L +
Sbjct: 362 TFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKM 421
Query: 442 VRNGVEVKPKEY 453
R+G+E + Y
Sbjct: 422 RRDGIEPELVHY 433
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 45/289 (15%)
Query: 205 VVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC A L++D A+ + PD LI+G C +D+A L REM G
Sbjct: 119 LMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG 178
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
E V Y+C+L K R + KV +M G+ +V + LI +LC+
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWEC-------VSKVFEEMSGRGIEPDVVMYTGLIDSLCRE 231
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ + A ++ +M E G PN T+ VLI S+ + V E + + M G A+ Y
Sbjct: 232 GKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTY 291
Query: 384 YEFLTRLCGIERIEQAMSVFEKM----------------------KTDGHNPDSETYDLL 421
+T L G+ +++AM + E+M KT + D++
Sbjct: 292 NTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMM 351
Query: 422 MTKWCAHN---------------RVDKANALFDEAVRNGVEVKPKEYRV 455
CA N +V KA L DE +G+E Y +
Sbjct: 352 AENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSI 400
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 8/255 (3%)
Query: 197 RDKDSLRLVVEKLC-ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
RD S V+ LC + G A L++ A+E P L++ C + + +A L
Sbjct: 76 RDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGL 135
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
R+M G V Y + + LC D +A ++L +M +G+ NV ++
Sbjct: 136 LRDMQASGVRPDVVTYGTL---IRGLCDAADV----DKAVELLREMCESGIEPNVVVYSC 188
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ CK R E K+F M G P+ + LI SL + +V + +++D+M G
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + +C +++AMS+ M G D+ TY+ L+T +D+A
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAM 308
Query: 436 ALFDEAVRNGVEVKP 450
L +E + V+P
Sbjct: 309 GLLEEMIHGETMVEP 323
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V+YN +L + LCR+ LD+ A +L M + P V ++ L+ LC RR+
Sbjct: 78 AVSYNTVL---AALCRQGGC--LDA-ALFLLRVMAHETRPTAV-SYTTLMRALCAERRTG 130
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A+ L M G P+ T+ LI+ L AA V + E++ M +G Y L
Sbjct: 131 QAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLL 190
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C R E VFE+M G PD Y L+ C +V KA + D+ + G+E
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250
Query: 448 VKPKEYRVDPRYLKKPIAVKKGKK-RETLPEK 478
Y V + K +VK+ R + EK
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEK 282
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 125/314 (39%), Gaps = 47/314 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID L R G+ + ++M + G + + + +++ +C+ G A L + +
Sbjct: 225 IDSLCREGKVKKATQVMDKM-MERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKG 283
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG--FELGTVAYNCILDCVSKLCRKKD 286
D + + LI G ++DEA L EM G E V +N ++ + K R +
Sbjct: 284 VALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQ 343
Query: 287 PFRL-DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
F++ D AE NG N+ TFN+LI L ++ + + A++L M G P+
Sbjct: 344 AFQVRDMMAE--------NGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDS 395
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ +LI + +V + ++ +M+ G Y L LC +EQA + F++
Sbjct: 396 FTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE 455
Query: 406 MKTD----------------------------------GHNPDSETYDLLMTKWCAHNRV 431
M + G PDS TY +L+ + +
Sbjct: 456 MHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDL 515
Query: 432 DKANALFDEAVRNG 445
A + + +G
Sbjct: 516 GAAERVLKQMTASG 529
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 12/213 (5%)
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
+G C+D L + +A E V+Y ++ LC + R +A +L D
Sbjct: 91 QGGCLDAALFLLRVMAHETRPTA-----VSYTTLM---RALCAE----RRTGQAVGLLRD 138
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ +GV +V T+ LI LC + A++L M E G PN + L++ +A R
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGR 198
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
++ + M G Y + LC ++++A V +KM G P+ TY++
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
L+ C V +A +L + + GV + Y
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTY 291
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 144/349 (41%), Gaps = 13/349 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+ LV+ L G + F W F H+ ++ + GR K F + DFL+
Sbjct: 72 STDLVEQVLKRCNHLGFSAHRFFLWAKSIPGFQHSVQSFHILVEILGRSKQFAILWDFLI 131
Query: 156 DNKEVLGPKTLASCIDRLV-----RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ +E + + I ++ RA P + F RM+ ++G K + L++ LC
Sbjct: 132 ETRESDSSCKITNEIFWIIFTAYSRADLPDGAIRSFVRMD-EFGIKPSIIDVDLLLYTLC 190
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ + A++ + K +LI GW G +A+ L M G + +A
Sbjct: 191 KKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLA 250
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
YN +L+ LC+ EA L DM V + T+++ I + C A
Sbjct: 251 YNNLLE---ALCKGGHV----DEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAF 303
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+ +M PN T+ +IK L + +V E +++D M S+G Y
Sbjct: 304 GVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYH 363
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
C + +A+ + +M+ D PD TY++++ R DKA +++
Sbjct: 364 CDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWE 412
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+T+++LI+ KI S A +LF M E GCH + + L+++L + V E + +
Sbjct: 212 TTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFL 271
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M S Y F+ C + A V +KM+ P+ TY+ ++ + C
Sbjct: 272 NDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKI 331
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEK 478
+V++A L DE + +G++ Y Y V + K + EK
Sbjct: 332 KKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEK 381
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 42/339 (12%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM D G + ++ + +V+ +C+ G A L++
Sbjct: 83 TFTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRK 141
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSK 280
+ + I PD I +I G DG+ +A+ L EM G V Y+C+++ C S
Sbjct: 142 MEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSG 201
Query: 281 ------------LCRKKDPFRLD--------------SEAEKVLLDMEYNGVPRNVETFN 314
L RK P + + A+ +L +M +GV NV T N
Sbjct: 202 KWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCN 261
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEW-----------GCHPNETTFLVLIKSLYQAARVGE 363
L+ LC + +DA+++F M + G P+ T+ +LI L + E
Sbjct: 262 TLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLE 321
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+E+ + M G Y + LC R+++A +F+ M + +P+ T++ L+T
Sbjct: 322 AEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLIT 381
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+C VD LF E R G+ Y R +K
Sbjct: 382 GYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRK 420
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
++ ID L + GR T F M+ D G D + ++ C +G S A++L+++
Sbjct: 156 SAIIDGLWKDGRHTDAQNLFIEMQ-DKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEML 214
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+I PD LI +G L+ A+ L +EM G V N +LD + + K
Sbjct: 215 VRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK 274
Query: 286 DPFRLDSEAEKVLLDME----YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
D + +K ++D++ +NGV +V+T+N+LIS L + +A +L+ M G
Sbjct: 275 DALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 334
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ T+ +I L + +R+ E +M D M S ++ + +T C ++ +
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+F +M G ++ TY L+ + ++ + +F E + +GV
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 22/261 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ LV+ G + M G + + +++ LC++G A ++ K
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISS-GVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 225 TA------------NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
N + PD + ++LI G +GK EA+ L EM G TV Y+
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+ ++ LC++ RLD EA ++ M N+ TFN LI+ CK +D ++L
Sbjct: 343 SM---INGLCKQS---RLD-EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F MG G N T++ LI+ + + ++ M S+G LT L
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455
Query: 393 IERIEQAMSVFE--KMKTDGH 411
E +++A+++ E +M D H
Sbjct: 456 KEELKRALAMLEELQMSMDHH 476
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++LIK +C KL A ++ + GF V +N +L LC + SEA
Sbjct: 19 NILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLL---HGLCVEDRV----SEA-- 69
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
LD+ + NV TF L++ LC+ R +A+ L RM E G PN+ T+ ++ +
Sbjct: 70 --LDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDGHNP 413
+ ++ +M+ + K D + + G+ R A ++F +M+ G P
Sbjct: 128 KMGDTVSALNLLRKMEELSHI--KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAV 442
D TY ++ +C+ + +A L E +
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEML 214
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P ++ +FN+LI C + A+ F ++ + G HP TF L+ L RV E
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ +M + + LC R+ +A+++ ++M DG P+ TY ++
Sbjct: 71 DLFHQMCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126
Query: 426 C 426
C
Sbjct: 127 C 127
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 12/209 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ G CV+ ++ EA L +M + T N LCR+ EA +L
Sbjct: 56 LLHGLCVEDRVSEALDLFHQMCKPNVVTFTTLMN-------GLCREGRVV----EAVALL 104
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKSLYQ 357
M +G+ N T+ ++ +CK+ + A+ L +M E P+ + +I L++
Sbjct: 105 DRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWK 164
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
R + + M+ G Y + C + +A + ++M +PD T
Sbjct: 165 DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVT 224
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ L+ ++ A L E + +GV
Sbjct: 225 FSGLINALVKEGDLNSAQDLLQEMISSGV 253
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 160/377 (42%), Gaps = 36/377 (9%)
Query: 86 LHLIFSHVTPTPSL--VQSTLNFSPEAGRA--ILGFNHWLTQNANFSHTDETLSFFTDYF 141
+H +F V P+ +L + L+ E R +L + L AN S E + F
Sbjct: 291 VHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVL 350
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR F F + +C LV+ + FE + R G K +
Sbjct: 351 GRGGYFPGNSVF----------NVVMAC---LVKGAELRETCDVFEIL-RKQGVKAGIGA 396
Query: 202 LRLVVEKLCEN-----GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
++E L +N G Y + + + +F + ++I +C +D A
Sbjct: 397 YLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYN----MIINCFCRAKLMDNASEAF 452
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
R+M G V +N + ++ C+ +A K+L + NG+ ++ TF+ +
Sbjct: 453 RDMQVRGVVPNLVTFNTL---INGHCKDGAI----DKARKLLESLLENGLKPDIFTFSSI 505
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ LC+I+R+E+A++ F M EWG +PN + +LI+SL V +++ RM+ G
Sbjct: 506 VDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGI 565
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + C + ++E+A +F+ M G NPD+ TY + R+++A
Sbjct: 566 SPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKK 625
Query: 437 LFDEAVRNGVEVKPKEY 453
+F NG P Y
Sbjct: 626 MFYSMEANG--CSPDSY 640
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 116/257 (45%), Gaps = 8/257 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + S +++ C A + +D + P+ + LI G C DG +D+A
Sbjct: 424 GLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKA 483
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++L + G + ++ I+D + ++ R + EA + +M G+ N
Sbjct: 484 RKLLESLLENGLKPDIFTFSSIVDGLCQIKRTE-------EALECFTEMIEWGINPNAVI 536
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N+LI +LC I ++KL RM + G P+ ++ LI+ + +V + ++ D M
Sbjct: 537 YNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMS 596
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+G Y F+ L R+E+A +F M+ +G +PDS +L++ V+
Sbjct: 597 RSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVE 656
Query: 433 KANALFDEAVRNGVEVK 449
+A + + + G+ +
Sbjct: 657 EAQNIIERCRQKGISLN 673
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 162/409 (39%), Gaps = 51/409 (12%)
Query: 85 RLHLIFSHVTPT----PSLVQSTLNFSPEAGRAILGFNHWL-TQNANFSHTDETLSFFTD 139
+ H SHV PT S+ ++ N G A+L + +N F T++ L
Sbjct: 93 KFHSWLSHVNPTLAAHNSVHRALRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLA 152
Query: 140 YFGRR--KDFKAIHDFLVDNKEVLGPKT--LASCIDRLVRAGRPTQVLGFFERMERDYGF 195
+GR ++ A H F + L P T + ID LV++ F++M D
Sbjct: 153 SWGRLGLANYSA-HVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCV 211
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKR 254
D+ + ++ +C+ G A +LV+ ++ FP+ +LI+G+C+ ++DEA
Sbjct: 212 A-DRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFG 270
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR--------LDSEAEK---------- 296
+ M G + V + R DP + LD E E+
Sbjct: 271 VFETMKDSGVYPNEATVRAL---VHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACD 327
Query: 297 -VLLDMEYNGVPRNV-----------------ETFNVLISNLCKIRRSEDAIKLFYRMGE 338
VL + N + + + FNV+++ L K + +F + +
Sbjct: 328 TVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRK 387
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G +L LI+ LY+ EGD + ++ S G Y + C + ++
Sbjct: 388 QGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDN 447
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
A F M+ G P+ T++ L+ C +DKA L + + NG++
Sbjct: 448 ASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLK 496
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S +D L + R + L F M ++G + +++ LC G + + KL++
Sbjct: 501 TFSSIVDGLCQIKRTEEALECFTEM-IEWGINPNAVIYNILIRSLCTIGDVARSVKLLRR 559
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E I PD + LI+ +C K+++AK+L M R G Y+ ++ +S+ R
Sbjct: 560 MQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGR 619
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA+K+ ME NG + N++I L + E+A + R + G
Sbjct: 620 LE-------EAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISL 672
Query: 344 N 344
N
Sbjct: 673 N 673
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 38/284 (13%)
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
RL +KL + Y Y E +VK IFPD + LI G+C+ G+L++A RL EM
Sbjct: 110 RLCKDKLVVDAYDLYCEMVVK----RIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLK 165
Query: 263 GFELGTVAYNCILDCVSKLCRKKD----------------------------PFRLDSEA 294
++N ++D LC++ D + L +A
Sbjct: 166 NIVPNVCSFNILID---GLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKA 222
Query: 295 EK---VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
K + M NGV ++ ++N++I+ L K + ++A+ LF M P+ T+ L
Sbjct: 223 NKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTL 282
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L + R+ ++ID M++ G + Y L LC + A+ +F K+K G
Sbjct: 283 IDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGF 342
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+ TY++L+ C + R+ A +F + + G + + Y V
Sbjct: 343 EPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTV 386
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + D + +++I G +DEA L +EM T+ Y+ ++D + KL R
Sbjct: 235 NGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISY 294
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+ L E M G NV T++ L++ LCK + AI++F ++ + G PN
Sbjct: 295 VWDLIDE-------MRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMV 347
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +L+ L + R+ + E+ + GY + + Y + LC ++A
Sbjct: 348 TYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY------ 401
Query: 407 KTDGHNPDSETYDLLM 422
G P++ TY++++
Sbjct: 402 ---GCTPNAVTYEIII 414
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 108/274 (39%), Gaps = 28/274 (10%)
Query: 194 GFKRDKDSLRLVVEK---LCENGYA-SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKL 249
G +RD +L +++ LC+ YA S K++K PD L+KG C++ ++
Sbjct: 5 GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQ---PDTVTLTTLLKGLCINNEV 61
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
+A ++ GF L V+Y +++ + K K P +
Sbjct: 62 KKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQF------------------- 102
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
++++I+ LCK + DA L+ M P+ T+ LI ++ + + +
Sbjct: 103 --MYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFN 160
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M+ + + LC ++ SV M PD T L+ +
Sbjct: 161 EMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVK 220
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
+ +KA +F+ +NGV + + Y + L K
Sbjct: 221 KANKARYIFNAMAQNGVTIDLRSYNIMINGLSKA 254
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 36/234 (15%)
Query: 135 SFFTDYFGRRKDFKA--IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
S YF +K KA I + + N + ++ I+ L +A + + F+ M+
Sbjct: 211 SLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQ-- 268
Query: 193 YGFKR---DKDSLRLVVEKLCENGYASYAEKLVKD------TANEIFPDDKICDLLIKGW 243
FK D + +++ L + G SY L+ + +AN I L+
Sbjct: 269 --FKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSS-----LLNVL 321
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G D A R+ ++ GFE V YN ++D + K R KD A+++ D+
Sbjct: 322 CKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKD-------AQEIFHDLLI 374
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
G +V + V+I+ LC+ ++A +GC PN T+ ++I++L++
Sbjct: 375 KGYRLDVRLYTVMINGLCREALFDEA---------YGCTPNAVTYEIIIRALFK 419
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ ++ I+ R G +V E+M++ G K + + ++ LC + AE+ +
Sbjct: 706 SYSTVINGYCRFGELDKVWKLIEKMKQK-GLKPNSYTYGSIIGLLCRICKLAEAEEAFSE 764
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I PD + L+ G+C G + A + EM+ + Y I +S C+
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI---ISGFCQ 821
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D EA K+ +M G+ ++ TF L++ CK +DA ++ M + GC P
Sbjct: 822 IGDMV----EAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSP 877
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L + + +E++ M G Y + LC IE+A+ +
Sbjct: 878 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 937
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ + G N D+ TY LM +C +DKA + E + G++
Sbjct: 938 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQ 981
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 10/270 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGW 243
F+E RD D + ++ C+ G A KL + + PD L+ G+
Sbjct: 797 FYEMHSRD--ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGY 854
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G + +A R+ M + G V Y ++D LC++ D LDS A ++L +M
Sbjct: 855 CKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLID---GLCKEGD---LDS-ANELLHEMWK 907
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ N+ T+N +++ LCK E+A+KL G + + T+ L+ + ++ + +
Sbjct: 908 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
E++ M G + + C +E + M G P++ T++ L+
Sbjct: 968 AQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVK 1027
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
++C N + A A++ + GVE K Y
Sbjct: 1028 QYCIRNNLKAATAIYKDMCSRGVEPDGKTY 1057
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 155/379 (40%), Gaps = 55/379 (14%)
Query: 137 FTDYFGRRKDFKAIHDFLVD------NKEVLGPKTLAS--C-IDRLVRAGR--------- 178
D F +R D +A F + +VL + S C I +V AG+
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 179 -PTQVLGFFERMERDYGFKRDKDSLRL---VVEKLCENGYASYA---EKLVK----DTAN 227
++ F E M KD+ R+ +++ C +Y + L K D+AN
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899
Query: 228 EIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E+ P+ + ++ G C G ++EA +L E G TV Y ++D
Sbjct: 900 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA- 958
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
C+ + +A+++L +M G+ + TFNVL++ C ED KL M
Sbjct: 959 --YCKSGEM----DKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1012
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G PN TTF L+K + + M S G K Y + C +++
Sbjct: 1013 KGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKE 1072
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK--EYRVD 456
A +F++MK G + TY +L+ + + +A +FD+ R+G+ + ++ D
Sbjct: 1073 AWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSD 1132
Query: 457 PRYLKKPIAVKKGKKRETL 475
+Y KGK+ +T+
Sbjct: 1133 TKY--------KGKRPDTI 1143
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 123/306 (40%), Gaps = 13/306 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G KD +H+ ++ T + ID L + G M + G + + +
Sbjct: 858 GHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFT 916
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+V LC++G A KLV + A + D L+ +C G++D+A+ + EM
Sbjct: 917 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEML 976
Query: 261 RGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
G + V +N +++ C+ + + EK+L M G+ N TFN L+
Sbjct: 977 GKGLQPTIVTFNVLMNGFCLHGMLE---------DGEKLLNWMLAKGIAPNATTFNCLVK 1027
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + A ++ M G P+ T+ L+K A + E + MK G+++
Sbjct: 1028 QYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSV 1087
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + ++ +A +F++M+ DG D E +D R D
Sbjct: 1088 SVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPI 1147
Query: 439 DEAVRN 444
DE + N
Sbjct: 1148 DEIIEN 1153
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D ++ D+ + G L EA+++ +M G L + N L +SK C K
Sbjct: 597 DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKT------ 650
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ A V + GV NV ++N++I +C++ R +A L M G P+ ++ +
Sbjct: 651 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTV 710
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + + + ++I++MK G Y + LC I ++ +A F +M G
Sbjct: 711 INGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDE 440
PD+ Y L+ +C + A+ F E
Sbjct: 771 LPDTIVYTTLVDGFCKRGDIRAASKFFYE 799
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 7/191 (3%)
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
RE G +YN ++ V +L R +EA +LL ME G +V +++ +
Sbjct: 658 REFPEVGVCWNVASYNIVIHFVCQLGRI-------NEAHHLLLLMELKGYTPDVISYSTV 710
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ C+ + KL +M + G PN T+ +I L + ++ E +E M G
Sbjct: 711 INGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + C I A F +M + PD TY +++ +C + +A
Sbjct: 771 LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 830
Query: 437 LFDEAVRNGVE 447
LF E + G+E
Sbjct: 831 LFHEMLCRGLE 841
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK-IRRSEDAIKLFYRMGEWGCHPNET 346
F + EA KV M G+ +V++ NV ++ L K ++ AI +F E G N
Sbjct: 611 FGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVA 670
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
++ ++I + Q R+ E ++ M+ GY Y + C +++ + EKM
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
K G P+S TY ++ C ++ +A F E + G+
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L R G + F+ ME G K + +V LC+ G + L+KD
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ EI P+ ++L+ + +GKL EA L +EM G + YN ++D C
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD---GYCM 345
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ RL SEA +L M N ++ TF LI C ++R +D +K+F + + G
Sbjct: 346 QN---RL-SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +L++ Q+ ++ +E+ M S G Y L LC ++E+A+ +F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E ++ + Y ++ C +V+ A LF GV+ Y V
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 9/273 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
+ R + VL F +++E + G + +L +++ C +A ++ + P
Sbjct: 98 IARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + LIKG ++GK+ EA L M G + V YN I V+ +CR D
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSI---VNGICRSGDT---- 209
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A +L ME V +V T++ +I +LC+ + AI LF M G + T+ L
Sbjct: 210 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
++ L +A + +G ++ M S + L ++++A ++++M T G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+P+ TY+ LM +C NR+ +AN + D VRN
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 137/313 (43%), Gaps = 9/313 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ + + D +V+N T S ++ + R+G + L +ME + K D +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME-ERNVKADVFT 230
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC +G A L K+ + + + L++G C GK ++ L ++M
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ +N +LD K + + EA ++ +M G+ N+ T+N L+
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQ-------EANELYKEMITRGISPNIITYNTLMDGY 343
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C R +A + M C P+ TF LIK RV +G ++ + G
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C +I+ A +F++M + G PD TY +L+ C + +++KA +F++
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 441 AVRNGVEVKPKEY 453
++ +++ Y
Sbjct: 464 LQKSKMDLGIVMY 476
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R + + D +V NK T S I R + F + + G + +
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTY 406
Query: 203 RLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++V+ C++G AE+L ++ ++ + PD +L+ G C +GKL++A + ++ +
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
+LG V Y I++ + K + +D + L + GV NV T+ V+IS LC
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNL-------FCSLPCKGVKPNVMTYTVMISGLC 519
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
K +A L +M E G PN+ T+ LI++ + + ++I+ MKS G++
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 7/183 (3%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+E NG+ N+ T N++I+ C+ ++ A + ++ + G P+ TTF LIK L+ +
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E ++DRM G Y + +C A+ + KM+ D TY
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK-------PIAVKKGKKRE 473
++ C +D A +LF E G++ Y R L K + +K RE
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 474 TLP 476
+P
Sbjct: 294 IVP 296
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 90/218 (41%), Gaps = 12/218 (5%)
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
+++ G N +++C + C+ + + + K+ G + TFN
Sbjct: 111 CKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL-------GYEPDTTTFNT 163
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI L + +A+ L RM E GC P+ T+ ++ + ++ +++ +M+
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC I+ A+S+F++M+T G TY+ L+ C + +
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
L + V E+ P + + VK+GK +E
Sbjct: 284 LLLKDMVSR--EIVPNVITFNVLL---DVFVKEGKLQE 316
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 30/298 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANE 228
I L GR + L + M G + + +++E +C++ G+ E L + A
Sbjct: 183 IRGLCDRGRVGEALSLLDDMLHR-GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 241
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +++I G C +G++D+A+ + GF+ TV+Y +L + R +D
Sbjct: 242 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 301
Query: 289 RLDSE----------------------------AEKVLLDMEYNGVPRNVETFNVLISNL 320
L +E A +VL M +G N N++I+ +
Sbjct: 302 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 361
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R +DA + MG +GC P+ ++ ++K L +A R + E++ M +
Sbjct: 362 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 421
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ F+ LC IEQA + E+M G + TY+ L+ +C RVD A LF
Sbjct: 422 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 479
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 120/275 (43%), Gaps = 12/275 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ + R GR F R+ YGF+ D S V++ LC E+L + +
Sbjct: 253 INGMCREGRVDDAREFLNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 311
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P++ D+L++ +C G ++ A ++ +M G T N +++ + K R D F
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 371
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ L +M G + ++ ++ LC+ R EDA +L M C PNE TF
Sbjct: 372 QF-------LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 424
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
I L Q + + +I++M G + Y + C R++ A+ +F M
Sbjct: 425 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC 484
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
P++ TY L+T C R+D A L E ++
Sbjct: 485 ---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 35/306 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ + + GR F M YG D S V++ LC A++L+K+ +
Sbjct: 358 INTICKQGRVDDAFQFLNNMG-SYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CV-------- 278
P +++ + I C G +++A L +M G E+ V YN +++ CV
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 476
Query: 279 -------------------SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ LC + RLD+ AE +L +M NV TFNVL+S
Sbjct: 477 ELFYSMPCKPNTITYTTLLTGLCNAE---RLDAAAE-LLAEMLQKDCAPNVVTFNVLVSF 532
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C+ ++AI+L +M E GC PN T+ L+ + + E E++ + S G +
Sbjct: 533 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPD 592
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + L +R+E+A+ +F ++ G P + Y+ ++ C D A F
Sbjct: 593 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 652
Query: 440 EAVRNG 445
V NG
Sbjct: 653 YMVSNG 658
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 120/309 (38%), Gaps = 45/309 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L R GR + ER G D + +V C G A +L+ +
Sbjct: 116 IRNLCRRGRTSDAARVLRAAERS-GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--V 172
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD +I+G C G++ EA L +M G + V Y +L+ V K F
Sbjct: 173 APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK----STGF- 227
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK--------------------------- 322
+A +VL +M G N+ T+NV+I+ +C+
Sbjct: 228 --GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 285
Query: 323 --------IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
+R ED +LF M E C PNE TF +L++ + V +++++M
Sbjct: 286 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 345
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G A + +C R++ A M + G +PD+ +Y ++ C R + A
Sbjct: 346 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 405
Query: 435 NALFDEAVR 443
L E VR
Sbjct: 406 KELLKEMVR 414
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 19/246 (7%)
Query: 205 VVEKLCENGYASYAEKLVK-----DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
++ LC G S A ++++ TA ++F + L+ G+C G+LD A+RL M
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT----LVAGYCRYGQLDAARRLIASM 170
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ AY + LC D R+ EA +L DM + G +V T+ VL+
Sbjct: 171 -----PVAPDAYT-YTPIIRGLC---DRGRV-GEALSLLDDMLHRGCQPSVVTYTVLLEA 220
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+CK A+++ M GC PN T+ V+I + + RV + E ++R+ S G+
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y L LC +R E +F +M P+ T+D+L+ +C V++A + +
Sbjct: 281 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 340
Query: 440 EAVRNG 445
+ +G
Sbjct: 341 QMSGHG 346
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 10/205 (4%)
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ LCR+ S+A +VL E +G +V +N L++ C+ + + A +L M
Sbjct: 116 IRNLCRRGR----TSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP 171
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
P+ T+ +I+ L RVGE ++D M G Y L +C
Sbjct: 172 ---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG 228
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
QAM V ++M+ G P+ TY++++ C RVD A + G + Y
Sbjct: 229 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT-- 286
Query: 458 RYLKKPIAVKKGKKRETLPEKMARK 482
LK A K+ + E L +M K
Sbjct: 287 -VLKGLCAAKRWEDVEELFAEMMEK 310
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 146/360 (40%), Gaps = 28/360 (7%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFG-----RRKDFKAIHD 152
+L +N + GR F +L ++ + +T+S+ T G R +D K +
Sbjct: 352 TLCNIVINTICKQGRVDDAF-QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 410
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+V T + I L + G Q E+M ++G + + + +V C
Sbjct: 411 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS-EHGCEVNIVTYNALVNGFCVQ 469
Query: 213 GYASYAEKLVKDTANEIF------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
G D+A E+F P+ L+ G C +LD A L EM +
Sbjct: 470 GRV--------DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 521
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V +N + VS C+K L EA +++ M +G N+ T+N L+ + K S
Sbjct: 522 NVVTFNVL---VSFFCQKG----LMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 574
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+A++L + + G P+ T+ +I L + RV E +M ++ G Y +
Sbjct: 575 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 634
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L LC + A+ F M ++G P+ TY L+ + + + L E GV
Sbjct: 635 LLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 9/272 (3%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
AG L FFE MER+ + + V+ C+ A KL++ E + P+
Sbjct: 216 AGNLEMGLRFFEEMERNRCLP-NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLL 274
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+++I G C G+++E + EM R GF V YN +++ K+ L SE
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE- 333
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
M NG+P +V T+ LI+ +CK A++ F +M G PN T+ LI
Sbjct: 334 ------MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
Q + E + D M +G+ Y L C R+E+A+ + M+ G +PD
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+Y ++ +C + +D+A + E V GV
Sbjct: 448 VVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 110/245 (44%), Gaps = 9/245 (3%)
Query: 205 VVEKLCENGY---ASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+ + L EN +Y + +KDT + DL++K +++A +
Sbjct: 101 LAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKL 160
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
GF G ++YN ILD + + CRK F AEKV +M +GV NV ++N+LI C
Sbjct: 161 NGFMPGVLSYNAILDSIVR-CRKPVIF-----AEKVYREMIASGVSLNVFSYNILIRGFC 214
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
E ++ F M C PN T+ +I + + R+ E +++ M G
Sbjct: 215 AAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLL 274
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + LC + RIE+ V +M G PD TY+ L+ +C +A L E
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM 334
Query: 442 VRNGV 446
+RNG+
Sbjct: 335 LRNGL 339
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 141/343 (41%), Gaps = 53/343 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG---------------- 213
I+ L R GR + G M+R GF D + +V C+ G
Sbjct: 280 INGLCRVGRIEETSGVLAEMDRK-GFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338
Query: 214 -------YASYAEKLVK----DTANEIF---------PDDKICDLLIKGWCVDGKLDEAK 253
Y S + K + A E F P+ LI G+ G +DEA
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398
Query: 254 RLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
R+ EM R GF V YN +L+ CVS R++ EA +L ME G+ +V
Sbjct: 399 RIWDEMIRSGFPPTIVTYNALLNGHCVSG--------RME-EAIGLLRGMEGKGLSPDVV 449
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+++ +I+ C+ + + A ++ M E G P+ T+ LI+ L + R+ E ++ M
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM 509
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ + Y + C + +A+++ ++M G PD+ TY++L+ R
Sbjct: 510 LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569
Query: 432 DKANAL-----FDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+A L +DE++ NG+ K +A+ KG
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKG 612
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 30/310 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ + +AG + + FF++M G + + + ++ + G+ A ++ +
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVR-GLRPNGVTYTSLINGFSQKGFMDEAYRIWDE 403
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
FP + + L+ G CV G+++EA L R M G V+Y+ I ++ CR
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTI---IAGFCR 460
Query: 284 KKD---PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
++ F++++E M GV + T++ LI LC+ RR +A LF M
Sbjct: 461 YQELDRAFQMNAE-------MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+E T+ LI + + E + D M G+ Y + L R +A
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573
Query: 401 SVFEKMKTDGHNPDSETYDLLMTK---------------WCAHNRVDKANALFDEAVRNG 445
+ K+ D P+ TYD L+ +C +++A+ +F+ ++
Sbjct: 574 RLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633
Query: 446 VEVKPKEYRV 455
+ Y V
Sbjct: 634 QKPNEAVYNV 643
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 55/232 (23%)
Query: 180 TQVLGFFERMERDYGFKR-----------DKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
T + GF E D F+ D + +++ LCE + A L ++ N+
Sbjct: 453 TIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK 512
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ PD+ LI G+C +G L+EA L EM + GF TV YN +++ ++K R ++
Sbjct: 513 SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREA 572
Query: 288 FRL-------------------------------------------DSEAEKVLLDMEYN 304
RL +EA++V M
Sbjct: 573 KRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKR 632
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
N +NV+I C+ A KL+ M ++G P+ T + L+K+LY
Sbjct: 633 NQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALY 684
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 14/304 (4%)
Query: 145 KDFKA--IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
K +KA + + L D+ V T I + G L +RM D +
Sbjct: 160 KTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS----VSPDVVTY 215
Query: 203 RLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ LC++G A E L + E +PD +LI+ C + + +A +L EM
Sbjct: 216 NTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRD 275
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G + V YN +++ + K RLD EA + L M G NV T N+++ ++C
Sbjct: 276 KGCKPDVVTYNVLINGICK------EGRLD-EAIRFLNHMPSYGCQPNVITHNIILRSMC 328
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
R DA K M GC P+ TF +LI L + +G +++++M G
Sbjct: 329 STGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSL 388
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y L LC +++E+A+ + M + G PD TY+ L+T C +VD A + ++
Sbjct: 389 SYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 448
Query: 442 VRNG 445
G
Sbjct: 449 GSKG 452
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + +++E C+ A KL+ + ++ PD ++LI G C +G+LDEA R
Sbjct: 246 DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFL 305
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M G + + +N IL + R D AEK L +M G +V TFN+L
Sbjct: 306 NHMPSYGCQPNVITHNIILRSMCSTGRWMD-------AEKFLAEMIRKGCSPSVVTFNIL 358
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LC+ AI + +M + GC PN ++ L+ +L + ++ E +D M S G
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 418
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y LT LC +++ A+ + ++ + G +P TY+ ++ + D A
Sbjct: 419 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 478
Query: 437 LFDEAVRNGVE 447
L DE G++
Sbjct: 479 LLDEMKGKGLK 489
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 12/280 (4%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S I L + G+ + E +E D G D + +++ C+ G A +L+ +
Sbjct: 149 TSLIRGLCKTGKTWKATRVMEILE-DSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS 207
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEA-KRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ PD + +++ C GKL EA + L R+M R + + Y +++ C++
Sbjct: 208 --VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYP-DVITYTILIEAT---CKES 261
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+A K+L +M G +V T+NVLI+ +CK R ++AI+ M +GC PN
Sbjct: 262 GV----GQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNV 317
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T ++++S+ R + ++ + M G + + + LC I +A+ V EK
Sbjct: 318 ITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEK 377
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M G P+S +Y+ L+ C ++++A D V G
Sbjct: 378 MPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 9/274 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLL 239
Q + + M RD G K D + +++ +C+ G A + + + P+ +++
Sbjct: 265 QAMKLLDEM-RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNII 323
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
++ C G+ +A++ EM R G V +N + ++ LCRK L A VL
Sbjct: 324 LRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL---INFLCRKG----LIGRAIDVLE 376
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M +G N ++N L+ LCK ++ E AI+ M GC+P+ T+ L+ +L +
Sbjct: 377 KMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 436
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+V E+++++ S G + Y + L + + + A+ + ++MK G PD TY
Sbjct: 437 KVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYS 496
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
L+ +VD+A A F + GV+ Y
Sbjct: 497 TLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITY 530
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 11/241 (4%)
Query: 206 VEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ +L NG K ++D PD C LI+G C GK +A R+ + G
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ YN + +S C+ E L ++ V +V T+N ++ LC
Sbjct: 177 VPDVITYNVL---ISGYCKT-------GEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 226
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ ++A+++ R + C+P+ T+ +LI++ + + VG+ +++D M+ G Y
Sbjct: 227 KLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN 286
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ +C R+++A+ M + G P+ T+++++ C+ R A E +R
Sbjct: 287 VLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346
Query: 445 G 445
G
Sbjct: 347 G 347
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 108/284 (38%), Gaps = 9/284 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFP 231
+ GR F M R G + +++ LC G A + L K + P
Sbjct: 327 MCSTGRWMDAEKFLAEMIRK-GCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTP 385
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ + L+ C D K++ A M G V YN +L + LC+ ++D
Sbjct: 386 NSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLL---TALCKDG---KVD 439
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
E +L + G + T+N +I L K+ +++DAIKL M G P+ T+ L
Sbjct: 440 VAVE-ILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTL 498
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ L + +V E ++ G Y + LC + +A+ M G
Sbjct: 499 VGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGC 558
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P +Y +L+ +A L +E GV K +V
Sbjct: 559 KPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E K L DM G ++ LI LCK ++ A ++ + + G P+ T+ VLI
Sbjct: 128 EGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLI 187
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ +G +++DRM + + Y L LC ++++AM V ++
Sbjct: 188 SGYCKTGEIGSALQLLDRMSVSPDVV---TYNTILRTLCDSGKLKEAMEVLDRQMQRECY 244
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY +L+ C + V +A L DE G + Y V
Sbjct: 245 PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 10/280 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ R G + RM+RD G + + +V G+ A K+V+
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKVVES 303
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLC 282
TA PD + ++L G C GK+DEA RL EM R G L V YN ++D K
Sbjct: 304 MTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFK-- 361
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+R S+A ++L +M GV + T N+++ +LCK + E+A+ ++ E G
Sbjct: 362 -----WRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ LI + +A V + ++D M G + L LC ++R E A +
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
G PD +Y +M + + A L+D+ +
Sbjct: 477 LHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 119/275 (43%), Gaps = 9/275 (3%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDL 238
+ L E M RD G K + +VV+ LC+ G A KL K + PD +
Sbjct: 366 SDALRLLEEM-RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNT 424
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI +C G + +A L EM G ++ T N +L + K+ R +D AE++L
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYED-------AEELL 477
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
G + ++ +++ K E A++L+ +M E P+ +T+ LIK L +
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRM 537
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E + ++ G + Y + C +E A KM + PD T
Sbjct: 538 ERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTC 597
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ LM C H ++DKA LF+ V G +V Y
Sbjct: 598 NTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 13/252 (5%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIF---PDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ L+V C G + A+ L + + F PD + L+ C G L EA+ L
Sbjct: 210 TFNLLVHTHCSKG--TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
M R G YN ++ ++L K +A KV+ M G ++ T+NVL
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIK-------QATKVVESMTAYGFEPDLRTYNVLA 320
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
LC+ + ++A +L M G P+ T+ L+ + ++ + +++ M+ G
Sbjct: 321 MGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ + LC ++E+A+ EK+ +G PD TY+ L+ +C V KA
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFT 440
Query: 437 LFDEAVRNGVEV 448
L DE V G+++
Sbjct: 441 LMDEMVGKGLKM 452
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 16/276 (5%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLG-FFERMERDYGFKRDKDSLRLVVEKLC 210
D +++ K + T + I L R R + + E +E+ G D+ + +++ C
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEK--GLVPDETTYNIIIHAYC 570
Query: 211 ENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ G A + K N PD C+ L+ G C+ GKLD+A +L G ++ +
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
YN + + +C+ D +D+ A DME G+ + T+NV++S L + RSE+A
Sbjct: 631 TYNTL---IQSMCKVGD---VDT-ALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD---EMIDRMKSAGYAIGKKDYYEF 386
+ +++ + G +L S A V E + E K+ A+ + Y E
Sbjct: 684 HNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL--ETYMER 741
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
L LC ++++A +V ++M G D TY LM
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLM 777
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N TFN+L+ C DA+ M +G P+ T+ L+ + + +GE ++
Sbjct: 207 NHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALL 266
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
RMK G A + Y ++ + I+QA V E M G PD TY++L C
Sbjct: 267 ARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQA 326
Query: 429 NRVDKANALFDEAVRNGVEV 448
+VD+A L DE R G +
Sbjct: 327 GKVDEAFRLKDEMERLGTAL 346
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 122/291 (41%), Gaps = 11/291 (3%)
Query: 158 KEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
+E L P + + ID +AG + + M G K D +L V+ LC+
Sbjct: 412 EEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM-VGKGLKMDTFTLNTVLYNLCKMKRY 470
Query: 216 SYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
AE+L+ F PD+ ++ + + + A RL +M YN +
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ LCR + RL +K+ +E VP T+N++I CK E+A +
Sbjct: 531 ---IKGLCRME---RLKEAIDKLNEFVEKGLVPDET-TYNIIIHAYCKEGDLENAFRFHN 583
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+M E P+ T L+ L ++ + ++ + G + Y + +C +
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++ A+ F+ M+ G PD+ TY+++++ R ++A+ + + +G
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD+ +++I +C +G L+ A R +M F+ V N +++ LC
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN---GLCLHG--- 608
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+LD +A K+ G +V T+N LI ++CK+ + A+ F M G P+ T+
Sbjct: 609 KLD-KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
V++ +L +A R E M+ ++ +G K F L ++A + K
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSG-----KLSQSFACPLLKPSSADEADVKEHEGKP 722
Query: 409 DGHNPDS------ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ + + ETY + C ++ +A A+ DE ++ G+ V Y
Sbjct: 723 EAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTY 773
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L G+ +VL F++M + GF+ + + ++ LC+ G S A +L++
Sbjct: 131 TFNTLIRGLCVEGKIGEVLHLFDKMIGE-GFQPNVVTYGTLINGLCKVGSTSAAIRLLRS 189
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD + +I C D ++ +A L EM G YN ++ + LC
Sbjct: 190 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 249
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K +L +M + + NV F+ ++ LCK + +A + M + G P
Sbjct: 250 WK-------HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ L+ + + E ++ D M G+A Y + C I+RIE+AM +F
Sbjct: 303 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 362
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
E+M P++ TY LM C R+ A ALF E V G
Sbjct: 363 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 404
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S ID L + + TQ F M G + ++ LC + L+ +
Sbjct: 203 TSIIDSLCKDRQVTQAFNLFSEMIHQ-GISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 261
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N +I P+ I ++ C +GK+ EA + M + G E V YN ++D C +
Sbjct: 262 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD---GHCLRS 318
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ EA KV M G +V +++ LI+ CKI+R E A+ LF M PN
Sbjct: 319 EM----DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 374
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ L+ L R+ + + M + G Y L LC R+++A+++ +
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ +PD + Y +++ C ++ A LF G+ Y +
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 484
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 157/382 (41%), Gaps = 56/382 (14%)
Query: 102 STLNFS-PEAGRAILGFN-HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE 159
+T+ FS P +G +L H+L+ + N H+ + +F + D L
Sbjct: 2 ATIAFSSPGSGTCMLSLPPHFLSSSHNTFHS------------KSLNFNTLDDALSSFNR 49
Query: 160 VLG---PKTLASCIDRLVRAGRP---TQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN- 212
+L P ++A L+ + + VL +M+ +G + +L +++ C
Sbjct: 50 MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMD-SFGIPPNIYTLNILINSFCHLQ 108
Query: 213 --GYA-SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
G+A S K++K P+ + LI+G CV+GK+ E L +M GF+ V
Sbjct: 109 RLGFAFSVLAKILKLGHQ---PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVV 165
Query: 270 AYNCILDCVSKLCRKKDPFRL--------------------DS--------EAEKVLLDM 301
Y +++ + K+ RL DS +A + +M
Sbjct: 166 TYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEM 225
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
+ G+ ++ T+N LI LC + + L M PN F ++ +L + +V
Sbjct: 226 IHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 285
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E +++D M G Y + C +++A+ VF+ M G PD +Y L
Sbjct: 286 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 345
Query: 422 MTKWCAHNRVDKANALFDEAVR 443
+ +C R++KA LF+E R
Sbjct: 346 INGYCKIQRIEKAMYLFEEMCR 367
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 10/278 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV+ LC+ G A +V + P+ + L+ G C+ ++DEA ++ M G
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 334
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F V+Y+ +++ K+ R + L E + L +P V T++ L+ LC +
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL------IPNTV-TYSTLMHGLCHV 387
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R +DAI LF+ M G P+ ++ +L+ L + R+ E ++ ++ + + Y
Sbjct: 388 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 447
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ +C +E A +F + + G +P+ TY +++ C + +A+ LF E R
Sbjct: 448 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR 507
Query: 444 NGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
G Y + R + +G + L E +AR
Sbjct: 508 KGYSPNGCTYNLITRGFLRNNETLRGI--QLLQEMLAR 543
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ G+P N+ T N+LI++ C ++R A + ++ + G PN TF LI+ L +
Sbjct: 85 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+GE + D+M G+ Y + LC + A+ + M+ PD Y
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
++ C +V +A LF E + G+
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGIS 231
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 128/302 (42%), Gaps = 9/302 (2%)
Query: 145 KDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
K A+ + +V++K + ++ +D L + G+ + + M + G + + +
Sbjct: 251 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR-GVEPNVVTYNA 309
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C A K+ + F D + LI G+C ++++A L EM R
Sbjct: 310 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 369
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
TV Y+ ++ + + R +D L E M G + ++ +L+ LCK
Sbjct: 370 LIPNTVTYSTLMHGLCHVGRLQDAIALFHE-------MVTRGQIPDFVSYCILLDYLCKN 422
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR ++AI L + P+ + ++I + +A + ++ + S G Y
Sbjct: 423 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 482
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC + +A +F +MK G++P+ TY+L+ + +N + L E +
Sbjct: 483 TIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLA 542
Query: 444 NG 445
G
Sbjct: 543 RG 544
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N+ TFN LI LC + + + LF +M G PN T+ LI L + ++
Sbjct: 128 NIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 187
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M+ Y + LC ++ QA ++F +M G +P TY+ L+ C
Sbjct: 188 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 247
Query: 429 NRVDKANALFDEAVRNGV 446
AL +E V + +
Sbjct: 248 CEWKHVTALLNEMVNSKI 265
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ + L GR + F M G D S ++++ LC+N A L+K
Sbjct: 376 TYSTLMHGLCHVGRLQDAIALFHEMVTR-GQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + PD +I ++I G C G+L+ A+ L + G Y + ++ LC+
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIM---INGLCQ 491
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ L +EA K+ +M+ G N T+N++ + + I+L M G
Sbjct: 492 QG----LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSA 547
Query: 344 NETTFLVLIKSL 355
+ +T VL++ L
Sbjct: 548 DVSTSTVLVEML 559
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 29/213 (13%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEA 252
GF D S ++ C+ A L ++ E+ P+ L+ G C G+L +A
Sbjct: 334 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDA 393
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-----------DSEAEKVLLD- 300
L EM G V+Y +LD + K R + L D + +++D
Sbjct: 394 IALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDG 453
Query: 301 ----------------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ G+ NV T+ ++I+ LC+ +A KLF M G PN
Sbjct: 454 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 513
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
T+ ++ + + G +++ M + G++
Sbjct: 514 GCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 546
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 52/127 (40%)
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+DA+ F RM P+ F L+ S+ + + +M S G
Sbjct: 41 DDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNIL 100
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ C ++R+ A SV K+ GH P+ T++ L+ C ++ + LFD+ + G
Sbjct: 101 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGF 160
Query: 447 EVKPKEY 453
+ Y
Sbjct: 161 QPNVVTY 167
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 142/309 (45%), Gaps = 10/309 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ++ + G P Q + F+ G + +++ LC+ G A +L+ +
Sbjct: 437 TYCSLVNGFCQDGDPDQAMAVFKD-GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNE 495
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + PD +L+I G C G L +A L + G YN ++D CR
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD---GYCR 552
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +LDS E ++ M G+ +V T+N L++ LCK +SE+ +++F M E GC P
Sbjct: 553 Q---LKLDSAIE-LVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 608
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +I+SL + +V E +++ MKS G + +T C + ++ A +F
Sbjct: 609 NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLF 668
Query: 404 EKM-KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
M K + + TY+++++ + + A LF E +NG + YRV K
Sbjct: 669 RGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCK 728
Query: 463 PIAVKKGKK 471
V +G K
Sbjct: 729 TGNVNQGYK 737
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 8/246 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GFK D+ + +V C++G A + KD + + P + + LIKG C G + A
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L EM G + YN I++ + K+ S+A ++ D G ++ T
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKM-------GCLSDANHLIGDAITKGCIPDIFT 542
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N L+ C+ + + AI+L RM G P+ T+ L+ L + A+ E E+ M
Sbjct: 543 YNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMT 602
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G A Y + LC +++ +A+ + +MK+ G PD ++ L+T +C +D
Sbjct: 603 EKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLD 662
Query: 433 KANALF 438
A LF
Sbjct: 663 GAYGLF 668
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 127/311 (40%), Gaps = 50/311 (16%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKL---VKDTANEI 229
R G+ + + FERM+ F D S ++ L E GY + A K+ +KD E
Sbjct: 167 RKGKIQEAVDTFERMDL---FNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVE- 222
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI--------------- 274
D + IK +C G+ A RL R M G VAY +
Sbjct: 223 -SDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 281
Query: 275 -----LDC------------VSKLCRKKDPFRLDSEA--EKVLLDMEYNGVPRNVETFNV 315
L+C V LC+K F L+SE +KVL GV N+ TFN+
Sbjct: 282 LFDEMLECCLCPDVTTFNKLVHALCKK--GFVLESERLFDKVL----KRGVCPNLFTFNI 335
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
I LCK + A++L + G P+ T+ +I L + +RV E +E + +M + G
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG 395
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ Y + C + A + + G PD TY L+ +C D+A
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAM 455
Query: 436 ALFDEAVRNGV 446
A+F + + G+
Sbjct: 456 AVFKDGLGKGL 466
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 106/287 (36%), Gaps = 65/287 (22%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G K D + L++ LC+ G S A L+ D + PD + L+ G+C KLD A
Sbjct: 500 GCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSA 559
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL---------------------- 290
L M+ G + YN +L+ + K + ++ +
Sbjct: 560 IELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIES 619
Query: 291 ------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI----------RRSED------ 328
+EA +L +M+ G+ +V +F LI+ CK+ R E
Sbjct: 620 LCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSH 679
Query: 329 --------------------AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
A++LF M + GC P+ T+ VLI + V +G + +
Sbjct: 680 TTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFL 739
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
G+ + L LC ++++A+ + M PD+
Sbjct: 740 LENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 43/251 (17%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + +V LC+ G+ +E+L K + P+ ++ I+G C +G LD A RL
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL- 352
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
L CVS+ G+ +V T+N +
Sbjct: 353 ------------------LGCVSR-----------------------EGLRPDVVTYNTV 371
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I LC+ R +A + ++M G PN+ T+ +I + V + + ++ G+
Sbjct: 372 ICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGF 431
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + C +QAM+VF+ G P Y+ L+ C + A
Sbjct: 432 KPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQ 491
Query: 437 LFDEAVRNGVE 447
L +E G +
Sbjct: 492 LMNEMAEKGCK 502
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 5/190 (2%)
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ CR P+ A ++L +M G N + +++ + ++ A +LF M
Sbjct: 232 IKSFCRTGRPY----AALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEML 287
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E P+ TTF L+ +L + V E + + D++ G + F+ LC ++
Sbjct: 288 ECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLD 347
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR-VD 456
+A+ + + +G PD TY+ ++ C +RV +A + V G E Y +
Sbjct: 348 RAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSII 407
Query: 457 PRYLKKPIAV 466
Y KK + V
Sbjct: 408 DGYCKKGMVV 417
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 196/480 (40%), Gaps = 52/480 (10%)
Query: 12 LLLQQPPHR-----FISPQSTYFSRFSPTHYLNFLSK--PFSSKPTSNPKT-IDDPDQVI 63
LLL PP PQS +F SP H+ + P S P +N K+ I P +V
Sbjct: 12 LLLTTPPRTRTVPILPKPQSLFFYSSSPHHHQQHKRELEPSDSHPNANTKSPIGSPSRV- 70
Query: 64 ARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSL---VQSTLNFSPEAGRA--ILGFN 118
+ L ++DPL + IF + + P+ S L + GRA +
Sbjct: 71 ------QKLIASQSDPLLAKE----IFDYASRQPNFQHSYSSYLILILKLGRAKYFSFID 120
Query: 119 HWLT--QNANFSHTDETLSFFTDYFGRR-------KDFKAIHDFLVDNKEVLGPKTLASC 169
LT ++ N+ T S+ + +G K F I F + PK L
Sbjct: 121 DLLTDLKSKNYPVTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNP----SPKHLNGI 176
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
++ LV + + Y + S +++ C NG S A L +
Sbjct: 177 LEILVSHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRD 236
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + +L++ C +++ A L +M G+ ++Y +L+ LCRKK
Sbjct: 237 VMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLN---SLCRKKKL- 292
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA K+L M+ G ++ +N +I C+ R+ DA K+ M GC PN ++
Sbjct: 293 ---REAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSY 349
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ L E ++ M G++ + C + +IE+A V E++
Sbjct: 350 RTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLK 409
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
G P +ET+ +++++ C + + + + D +VK E + D R ++ I +++
Sbjct: 410 HGEAPHTETWVMMVSRICEVDDLQRIGEILD-------KVKKVELKGDTRIVEAGIGLEE 462
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L R G + F+ ME G K + +V LC+ G + L+KD
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ EI P+ ++L+ + +GKL EA L +EM G + YN ++D C
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD---GYCM 345
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ RL SEA +L M N ++ TF LI C ++R +D +K+F + + G
Sbjct: 346 QN---RL-SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +L++ Q+ ++ +E+ M S G Y L LC ++E+A+ +F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E ++ + Y ++ C +V+ A LF GV+ Y V
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 9/273 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
+ R + VL F +++E + G + +L +++ C +A ++ + P
Sbjct: 98 IARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + LI G C++GK+ +A L M G + V YN I V+ +CR D
Sbjct: 157 DTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSI---VNGICRSGDT---- 209
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A +L ME V +V T++ +I +LC+ + AI LF M G + T+ L
Sbjct: 210 SLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
++ L +A + +G ++ M S + L ++++A ++++M T G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+P+ TY+ LM +C NR+ +AN + D VRN
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R + + D +V NK T S I R + F + + G + +
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTY 406
Query: 203 RLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++V+ C++G AE+L ++ ++ + PD +L+ G C +GKL++A + ++ +
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
+LG V Y I++ + K + +D + L + GV NV T+ V+IS LC
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNL-------FCSLPCKGVKPNVMTYTVMISGLC 519
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
K +A L +M E G PN+ T+ LI++ + + ++I+ MKS G++
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 14/239 (5%)
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
VD K D+A L +EM R G V ++ +++ K+ LD + +E N
Sbjct: 65 VDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIAR--TKQFNLVLDFCKQ-----LELN 117
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ N+ T N++I+ C+ ++ A + ++ + G P+ TTF LI L +V +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++DRM G Y + +C A + KM+ D TY ++
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK-------PIAVKKGKKRETLP 476
C +D A +LF E G++ Y R L K + +K RE +P
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 264 FELGTVAYNC-----ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
EL +A+N +++C + C+ + + + K+ G + TFN LI+
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL-------GYEPDTTTFNTLIN 166
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC + A+ L RM E GC P+ T+ ++ + ++ +M+ +M+
Sbjct: 167 GLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKA 226
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC I+ A+S+F++M+T G TY+ L+ C + + L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 439 DEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
+ V E+ P + + VK+GK +E
Sbjct: 287 KDMVSR--EIVPNVITFNVLL---DVFVKEGKLQE 316
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 8/308 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T A+ + RL AG L R + D + +V C+ G + A ++ +
Sbjct: 4 TTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDE 63
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P++ L+ G+ G+ ++ L EM RGG E YNC+ + + CR
Sbjct: 64 MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCL---IGEWCR 120
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ R A + +M G+ RNV ++N LI+ LC+ + DA KL M G P
Sbjct: 121 TGEFER----ARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP 176
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF +L+ +A ++ ++MK+AG+ Y + C + +A
Sbjct: 177 SIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRAL 236
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
MK G P TY +L+ + N + KA + + G+EV Y V R L
Sbjct: 237 SDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCME 296
Query: 464 IAVKKGKK 471
+K +K
Sbjct: 297 GNMKDARK 304
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 116/287 (40%), Gaps = 9/287 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKI 235
G+ + FE M R G + + + ++ + C G A L + I +
Sbjct: 87 GQREKGFALFEEMRRG-GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVS 145
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ LI G C GKL +A +L M G + +N ++D K + S A
Sbjct: 146 YNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM-------SNAL 198
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
M+ G + T+N+LI+ C+ R A + M E G P + T+ +LI S
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ +G+ E++ M+ AG + Y + LC ++ A +F+ M G P +
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
YD+++ + KA L E + G+ Y + R L K
Sbjct: 319 VIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCK 365
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 36/271 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I R G + F+ M G R+ S ++ LC +G A KL+ E
Sbjct: 115 IGEWCRTGEFERARSLFDEMPV-RGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEG 173
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P +LL+ G+ GK+ A +M GF+ V YN + ++ CR +D
Sbjct: 174 TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNML---IAGFCRARDMT 230
Query: 289 R-----------------------LDS--------EAEKVLLDMEYNGVPRNVETFNVLI 317
R +DS +A ++L ME G+ + T+ VL+
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LC +DA KLF MGE G P+ + ++I + + ++I M+ G
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLI 350
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
Y + LC ++ ++A ++ + M+T
Sbjct: 351 PNSASYGLTIRVLCKDDKCQEAEALLDDMET 381
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G + + ++ LCE G +++K + D+I + LI G C GK++EA
Sbjct: 496 GLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEA 555
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L EM + F+ T YN ++ ++ + + D RL EA+ EY VP NV T
Sbjct: 556 FKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK------EYGFVP-NVYT 608
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +L+ CK R EDA+K F + + + +LI + + V E ++ D MK
Sbjct: 609 YALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMK 668
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S G Y + +C I R+++A +FE+M+ +G P+ Y L+ C ++D
Sbjct: 669 SRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMD 728
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
++ E NG+ Y +
Sbjct: 729 IVGSILLEMSSNGIRPNKITYTI 751
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
L G +V ++M + G D+ S ++ C+ G A KL ++ + F P
Sbjct: 511 LCERGNMEEVFEVLKQM-LEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQP 569
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + L+KG GK+D+ RL E GF Y +L+ K R +D
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIED----- 624
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A K +++Y V + +N+LI+ C+I +A KL M G P T+ L
Sbjct: 625 --AVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSL 682
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + RV E E+ + M++ G Y + C + +++ S+ +M ++G
Sbjct: 683 IHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGI 742
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P+ TY +++ +C + +A L +E +RNG+
Sbjct: 743 RPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGI 777
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 130/323 (40%), Gaps = 55/323 (17%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG------YASYA 218
T + ID L ++GR + L F +RM R K + +V + +G +
Sbjct: 292 TYNNVIDGLFKSGRFEEALRFKDRM------VRSKVNPSVVTYGVLISGLMKLEMFEEAN 345
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E LV+ + P++ + + LI G+C G + EA R+ EM G + V +N +L
Sbjct: 346 EVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQ-- 403
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV----------------------- 315
CR +AE+VL+ + +G+ N++ +
Sbjct: 404 -GFCRSNQM----EQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLS 458
Query: 316 ------------LISNLCKIRRSEDAIKLFYRMGEW-GCHPNETTFLVLIKSLYQAARVG 362
L+ LCK +AI+L++++ G N T L+ L + +
Sbjct: 459 GNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNME 518
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E E++ +M G + + Y + C +IE+A + E+M PD+ TY+ LM
Sbjct: 519 EVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLM 578
Query: 423 TKWCAHNRVDKANALFDEAVRNG 445
++D + L EA G
Sbjct: 579 KGLADMGKIDDVHRLLHEAKEYG 601
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 8/220 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FP K C+LL+ +L ++ + ++ G + ++ K R D
Sbjct: 217 VFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGD-- 273
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A + ME GV NV T+N +I L K R E+A++ RM +P+ T+
Sbjct: 274 -----AVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTY 328
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VLI L + E +E++ M S G+A + + + C + +A+ V ++M
Sbjct: 329 GVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAM 388
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
G P+ T++ L+ +C N++++A + + +G+ V
Sbjct: 389 KGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSV 428
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 8/186 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G D + + C+ G A L K +FP+ + +I G G+ +EA
Sbjct: 250 GVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEA 309
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
R M R V Y ++ + KL + EA +VL++M G N
Sbjct: 310 LRFKDRMVRSKVNPSVVTYGVLISGLMKL-------EMFEEANEVLVEMYSMGFAPNEVV 362
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI C+ +A+++ M G PN TF L++ ++ ++ + ++++ +
Sbjct: 363 FNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYIL 422
Query: 373 SAGYAI 378
S+G ++
Sbjct: 423 SSGLSV 428
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ +C G A+++ ++ NE + P+ LI G C G++D + EM G
Sbjct: 682 LIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNG 741
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ Y ++D KL K EA ++L +M NG+ + T+N L CK
Sbjct: 742 IRPNKITYTIMIDGYCKLGNMK-------EARELLNEMIRNGIAPDTVTYNALQKGYCKE 794
Query: 324 R 324
R
Sbjct: 795 R 795
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 30/329 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
+D L ++ R + E M + G + + ++ C+ G A L N
Sbjct: 109 VDALCKSARISDASLILEDM-IEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 167
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD ++LI G+C + + +L +EM + G E + YN ++D + K + D F
Sbjct: 168 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 227
Query: 289 RL--------------------DSEAEKVLLDMEYN--------GVPRNVETFNVLISNL 320
L D + LD+ Y G ++ T+N++IS
Sbjct: 228 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 287
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C+ R +DA +L RM E GC P+ T+ ++ L +A++V E E+ + +++ GY +
Sbjct: 288 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 347
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ LC R++ A + +M+ +G PD Y +L+ +C +++DK+ A F E
Sbjct: 348 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 407
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+ G Y + L K V+ G
Sbjct: 408 MLDKGCVPTVITYSIVIDKLCKSARVRDG 436
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 8/281 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ +A Q + ME+ G +++ LC+NG A +D
Sbjct: 35 TYSTLINGFCKARDFQQAYRLLDEMEKR-GIVPHNAVYNTIIKGLCDNGRVDSALVHYRD 93
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
P +L+ C ++ +A + +M G V YN +++ KL
Sbjct: 94 MQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 153
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
EA + M N +V T+N+LI CK R +D KL M ++GC PN
Sbjct: 154 -------DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 206
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ L+ SL ++ + + + M + + C + +++ A +F+
Sbjct: 207 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 266
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M G PD TY+++++ C NR+D A L + G
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 13/258 (5%)
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C+ L+ + K EA L + G ++ Y+ + ++ C+ +D F+ +A
Sbjct: 1 CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTL---INGFCKARD-FQ---QAY 53
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++L +ME G+ + +N +I LC R + A+ + YR + C P+ T+ +L+ +L
Sbjct: 54 RLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRHCAPSVITYTILVDAL 112
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++AR+ + +++ M AG A Y + C + +++A+ +F +M + +PD
Sbjct: 113 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDV 172
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
TY++L+ +C R L E V+ G E Y L VK GK +
Sbjct: 173 FTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL-----VKSGKYIDAF 227
Query: 476 PEKMARKRRRLKQIRLSF 493
RR K +F
Sbjct: 228 NLAQMMLRRDCKPSHFTF 245
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 7/210 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+L+I +C G+LD A L + M G YN + +S CR R+D +A +
Sbjct: 246 NLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIM---ISGACRAN---RID-DARQ 298
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M G P +V T+N ++S LCK + ++A +++ + G + T LI L
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 358
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
++ R+ + ++++ M+ G A Y + C ++++++++ F +M G P
Sbjct: 359 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVI 418
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
TY +++ K C RV L + GV
Sbjct: 419 TYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 142/319 (44%), Gaps = 12/319 (3%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLV---DNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + D G+ F L DN V +T I L +AGR ++ F M
Sbjct: 81 TYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEM 140
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGK 248
R+ G D + ++ L + G + A +L+++ P D + LI G DG+
Sbjct: 141 -RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+A +L +EM R G + ++ + ++D + K R D L L +M+ GV
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL-------LDEMKERGVKP 252
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V T+N LI+ K+ +A L M GC P+ T+ LI L +A+++ E +++
Sbjct: 253 GVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVL 312
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M+ G Y + L + A +F++MK+ G NPD TY L+T
Sbjct: 313 KKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKA 372
Query: 429 NRVDKANALFDEAVRNGVE 447
RV+ A LF+E G++
Sbjct: 373 ARVESACVLFEEMESVGIQ 391
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 132/283 (46%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + GR + + E MER +G D + ++ L ++G A KL ++
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMER-HGCPPDVMTYSSLITGLGKDGETVKAFKLFQE 209
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD L+ G++D+A L EM G + G V YN ++ K+
Sbjct: 210 MKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGD 269
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + L L +M+ NG +V T++ LI+ L K + ++A ++ +M + GC P
Sbjct: 270 LVEAYNL-------LDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPP 322
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L +A + + + DRMKS G Y +T L R+E A +F
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLF 382
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E+M++ G PD TY ++T +VD A+ LF E G+
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGL 425
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S I L + G + F+ M+R G K D + +++ L + G A +L+ +
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKR-RGRKPDSITFTALMDALGKAGRVDDALELLDE 244
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P + LI G+ G L EA L EM R G + V Y+C++ + K
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK--- 301
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+LD EA +VL ME G P + T+N LI+ L K DA +LF RM GC+P
Sbjct: 302 ---ASQLD-EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI +L +AARV + + M+S G Y +T L +++ A +F
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLF 417
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M+ G +PD TY+ + R +A +F++ +G+
Sbjct: 418 SEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGL 460
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 96/217 (44%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD LI GK + A + EM G + YN ++DC+ K + + RL
Sbjct: 42 PDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRL 101
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
L +M NG +V T+N LIS L K R +A LF M E GC P+ T+
Sbjct: 102 -------LAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNS 154
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI L + R + E+++ M+ G Y +T L +A +F++MK G
Sbjct: 155 LIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRG 214
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PDS T+ LM RVD A L DE GV+
Sbjct: 215 RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVK 251
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G++D+A RL EM G + YN L+ + + R K EA K+ DM+ +G+
Sbjct: 408 GQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFK-------EARKIFEDMKESGL 460
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T++ L+ L K + +DA L + E GC + F ++ L V E E
Sbjct: 461 LPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHE 520
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ S G G Y + L R+ +A + E +K G PD +Y L++
Sbjct: 521 LLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALG 580
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEY 453
++D A L +E + G+++ P+ Y
Sbjct: 581 QTGQIDTAFELLEEMSKRGLKLSPRSY 607
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 126/306 (41%), Gaps = 9/306 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + D + + G T + I + G + + M+R+ G K D +
Sbjct: 233 GRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN-GCKPDVVT 291
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ L + A +++K E P D I + LI G G L++A RL M
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G V Y+ ++ + K R + L E E V G+ ++ T+ +I+ L
Sbjct: 352 SKGCNPDVVTYSTLITALGKAARVESACVLFEEMESV-------GIQPDLFTYCSIITVL 404
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K + +DA +LF M G P+ T+ + SL + R E ++ + MK +G
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L L + ++ A + +++ G DS +D + + VD+A+ L
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQF 524
Query: 441 AVRNGV 446
A G+
Sbjct: 525 ANSKGL 530
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 305 GVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G P NV T+N L++ L K + E+A LF + P+ ++ LI SL +A +
Sbjct: 3 GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
E++ M++ G Y + L + ++A+ + +M+ +G PD TY+ L++
Sbjct: 63 ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS 122
Query: 424 KWCAHNRVDKANALFDEAVRNG 445
R+ +A LF E G
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERG 144
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 15/190 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ L R GR + FE M ++ G D + ++ L + A L+K+ +
Sbjct: 436 LNSLGRGGRFKEARKIFEDM-KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Query: 230 FPDDKI----CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
D + C ++ W G +DEA L + G G +YN ++D ++K R
Sbjct: 495 CAFDSLKFDECLEILTSW---GNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRV- 550
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
SEA L D++ G ++ +++ LIS L + + + A +L M + G +
Sbjct: 551 ------SEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSP 604
Query: 346 TTFLVLIKSL 355
++ L++ L
Sbjct: 605 RSYSNLVRKL 614
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 139/327 (42%), Gaps = 15/327 (4%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVD---NKEVLGPKTLASCIDRLVRAGRPTQV 182
NFSH +T R + F + L D ++ G + I AG+P
Sbjct: 90 NFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFA 149
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLI 240
L F R++ D+ +R SL ++ +N + K+ ++ + P+ C++LI
Sbjct: 150 LRTFIRIQ-DFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILI 208
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD-SEAEKVLL 299
K C ++ A ++ EM G V Y IL S R D A KV
Sbjct: 209 KALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSS--------RGDMVNANKVFG 260
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
++ G + T+ +L++ C+ R DAIKL MGE G PNE T+ V++++ +
Sbjct: 261 ELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEK 320
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+ GE ++D M Y + + LC +IE+A ++++M PD+
Sbjct: 321 KAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMS 380
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
L+ C +V +A LF E R +
Sbjct: 381 TLIHWLCKEGKVWEARKLFGEFERGAI 407
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
V++ LCE G A +L K + PD+ I LI C +GK+ EA++L E RG
Sbjct: 347 VIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGA 406
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ YN + ++ +C K + SEA K+ DM G N T+N+LI KI
Sbjct: 407 IP-SLLTYNTL---IAGMCEKGEL----SEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKI 458
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+++ I++ M + C PN++T+ +LI+ L + GE D+++ ++G + +
Sbjct: 459 GNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASG-GVDSDSW 517
Query: 384 YEFLTRLCG-IERIEQAMSVFEK 405
FL + G ++R +A+ F K
Sbjct: 518 DLFLNKAVGNLDRGSKALDSFFK 540
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 9/255 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLD 250
D G+ D + +++ CE G + A KL+ D N + P++ ++++ +C + K
Sbjct: 264 DRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAG 323
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA+ L +M + + + A C + LC + +++ E ++ N +P N
Sbjct: 324 EARNLLDDMLERQY-VPSSALCC--KVIDVLC---EAGKIEEACELWKRMLKKNCMPDNA 377
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+ LI LCK + +A KLF E G P+ T+ LI + + + E ++ D
Sbjct: 378 -IMSTLIHWLCKEGKVWEARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDD 435
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M GY Y + I ++ + + E+M + P+ TY +L+ + C
Sbjct: 436 MMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGM 495
Query: 431 VDKANALFDEAVRNG 445
+ + + A+ +G
Sbjct: 496 EGEVDKVVSMAMASG 510
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRM-GEWGCHPNETTFLVLIKSLYQAARVGEG 364
V R+V + N L++ + +R + +F ++G PN T +LIK+L + V
Sbjct: 161 VQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESA 220
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+++D M + G Y L + A VF ++ G PD+ TY +LM
Sbjct: 221 VKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNG 280
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR-YLKKPIAVKKGKKRETLPEKMARK 482
+C R+ A L D+ NGVE Y V Y K+ K G+ R L + + R+
Sbjct: 281 YCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEK---KAGEARNLLDDMLERQ 336
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 163 PKTLASC--IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
P + C ID L AG+ + ++RM + D + ++ LC+ G A K
Sbjct: 339 PSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMP-DNAIMSTLIHWLCKEGKVWEARK 397
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
L + P + LI G C G+L EA +L +M G++ YN ++ SK
Sbjct: 398 LFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSK 457
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ K+ R +L +M N N T+ +LI LCK+
Sbjct: 458 IGNAKEGIR-------ILEEMLDNRCMPNKSTYAILIEELCKM 493
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 162/406 (39%), Gaps = 54/406 (13%)
Query: 120 WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKT---LASCIDRLVRA 176
+ +Q NF H+ + GR + F I D L ++ P T I A
Sbjct: 73 YASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEA 132
Query: 177 GRPTQVLGFFERM-----------------------------------ERDYGFKRDKDS 201
P +VL F +M R +G + S
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 202 LRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
L+++ C N S A +L K ++ PD +LI+G+C G+++ A L +M
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
GF ++Y +L+ LCRK EA K+L M+ G ++ +N +I
Sbjct: 253 NKGFVPDRLSYTTLLN---SLCRKTQL----REAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C+ R+ DA K+ M GC PN ++ LI L EG + ++ M S G++
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 365
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ C ++E+A V E + +G S+T+++++ C + +K ++
Sbjct: 366 SVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLED 425
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKG-KKRETLPEKMARKRRR 485
AV+ +E D R + I + + + K AR+RRR
Sbjct: 426 AVK-------EEITGDTRIVDVGIGLGSYLSSKLQMKRKNARERRR 464
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 9/277 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ + G + M G D + VV+ LC +G A ++V++
Sbjct: 79 TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY-RGGFELGTVAYNCILDCVSKLC 282
+ PD LI GWC K+DEA +L +E+ ++ V Y ++D C
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALID---GFC 195
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ + +A K+L ME NV T++ L+ LCK + A+ LF RM GC
Sbjct: 196 KSGNL----EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCV 251
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ LI L A +V ++D M + Y L C + RIE+A +
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQL 311
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
F++M T PD TY L+ +C +R+++A L +
Sbjct: 312 FKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLE 348
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 130/310 (41%), Gaps = 48/310 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT--AN 227
ID +A + Q L FE+M R++ ++ + +VV LC+ S A +++K+
Sbjct: 14 IDGFCKANQLKQALACFEKM-REF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGK 71
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY-RGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD +I G+C G++D A + REM R G V Y ++D LCR
Sbjct: 72 SVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD---GLCRDG- 127
Query: 287 PFRLDSEAEKVLLDMEYNGV----------------PRNVE------------------- 311
++D E V +M+ GV R V+
Sbjct: 128 --KMDRACEMVR-EMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDV 184
Query: 312 -TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI CK E A+K+ M C PN T+ L+ L +A + + ++ R
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M S G Y + LC +++ A + ++M PD+ +Y+ L+ +C R
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR 304
Query: 431 VDKANALFDE 440
+++A LF E
Sbjct: 305 IEEAKQLFKE 314
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 127/321 (39%), Gaps = 46/321 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I A + + L ++ + +K D + +++ C++G A K++
Sbjct: 150 TFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGV 209
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ L+ G C G LD+A L R M G V Y + + LC
Sbjct: 210 MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL---IHGLCA 266
Query: 284 KKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+A ++L+D M P + ++N L+ C++ R E+A +LF M C
Sbjct: 267 AHK-----VDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCL 321
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSA---------------GYAIGKK------ 381
P+ T+ L++ A+R+ E +++ MK+A GY+ K+
Sbjct: 322 PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAE 381
Query: 382 ---------------DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
Y + LC R++ AM V + M P T++ ++ C
Sbjct: 382 FIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALC 441
Query: 427 AHNRVDKANALFDEAVRNGVE 447
+D+A L +G+E
Sbjct: 442 RLGDMDEAWKLLVAMAAHGLE 462
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 10/277 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S + L +AG Q L F RM G + + ++ LC A L+ +
Sbjct: 221 TYSSLLHGLCKAGDLDQALDLFRRMTSK-GCVPNVVTYTTLIHGLCAAHKVDAARLLMDE 279
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D + + L+ G+C G+++EAK+L +EM + Y C+ V C
Sbjct: 280 MTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCL---VRGFC- 335
Query: 284 KKDPFRLDSEAEKVLLDME-YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ RL+ EA +L +M+ G+ +V T++++++ + +R +A + M
Sbjct: 336 --NASRLE-EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 392
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ LI L +A RV E++ M + + + LC + +++A +
Sbjct: 393 PNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 452
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
M G P TY L+ + R++ A LF+
Sbjct: 453 LVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 489
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 49/277 (17%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL------------------------ 239
++++ C+ A + + P+++ +++
Sbjct: 12 IIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGK 71
Query: 240 ------------IKGWCVDGKLDEAKRLAREMY-RGGFELGTVAYNCILDCVSKLCRKKD 286
I G+C G++D A + REM R G V Y ++D LCR
Sbjct: 72 SVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD---GLCRDG- 127
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM---GEWGCHP 343
++D E V +M+ GV + TF+ LI+ C R+ ++A+KL+ + W P
Sbjct: 128 --KMDRACEMV-REMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW--KP 182
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI ++ + + +M+ M+ Y L LC ++QA+ +F
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+M + G P+ TY L+ CA ++VD A L DE
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDE 279
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+ G +A +++K+ N+ + P + +I C G +DEA +L M G
Sbjct: 401 LIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 460
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRL--DSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
E G V Y +L+ S+ R + + L + N VP + F+ LI LC
Sbjct: 461 LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPE--QAFSALIRGLC 518
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
K R + A+ + + C P E L ++ L +A R E ++I+ + G
Sbjct: 519 KAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V T+ ++I CK + + A+ F +M E+ PNE T+ V++ L +A + E++
Sbjct: 6 TVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVL 64
Query: 369 DRMKSA-GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT-DGHNPDSETYDLLMTKWC 426
M+ A Y + C +++A + +M T DG PD TY ++ C
Sbjct: 65 KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124
Query: 427 AHNRVDKANALFDEAVRNGVE 447
++D+A + E GVE
Sbjct: 125 RDGKMDRACEMVREMKLKGVE 145
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 10/304 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D + K V T + D R G +L FE + G K +
Sbjct: 272 GRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKK-GVKIGAYT 330
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++G S AE++++ N + I + LI G+C G L+ A + ++M
Sbjct: 331 CSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMK 390
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ YN +++ + K+ R +EA ++++ME NGV +VETFN LI
Sbjct: 391 SRLIRPDHITYNALINGLGKVERI-------TEAHDLVIEMEKNGVNPSVETFNTLIDAY 443
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ + E + M E G PN ++ ++ + + ++ E ++D M G
Sbjct: 444 GRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGA 503
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ Y + +QA + EKMK+ G P TY+LL+ C +++ +A L D
Sbjct: 504 QVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLD- 562
Query: 441 AVRN 444
++RN
Sbjct: 563 SLRN 566
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 130/306 (42%), Gaps = 8/306 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + + LV + T + V AG + +G RM D + S
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+V+ L + G A KL + + + P+ + +I G G L+ RL +M
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
R G + + YN +L S LCR R+ E VL +M + + T+++L
Sbjct: 251 RHGLKPNVITYNVLL---SGLCRAG---RM-GETAAVLDEMASRKMVPDGFTYSILFDGH 303
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ S+ + LF + G T +L+ L + ++ + +E++ + ++G
Sbjct: 304 SRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTT 363
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C I +E A S+F++MK+ PD TY+ L+ R+ +A+ L E
Sbjct: 364 VIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIE 423
Query: 441 AVRNGV 446
+NGV
Sbjct: 424 MEKNGV 429
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
++ +C +GK+ EA + +M+ G YN I+D + F L AEK
Sbjct: 474 IVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFML---AEK-- 528
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ +GVP ++ T+N+LI LCK + +A +L + +G P+ ++ LI +
Sbjct: 529 --MKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYR 586
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E+ M G + Y + L G R+ + +++++M P S Y
Sbjct: 587 SNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIY 646
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
++++ + K AL E G+ V
Sbjct: 647 NIMVDAYAKCGEESKVEALRKEMSDKGIAV 676
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 134/306 (43%), Gaps = 12/306 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G+ K + + L + V T I ++G L +RM D
Sbjct: 162 IGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN----VAPDVV 217
Query: 201 SLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++ LC++G A E L + E +PD +LI+ C + + +A +L EM
Sbjct: 218 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 277
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G + V YN +++ + K RLD EA K L +M G NV T N+++ +
Sbjct: 278 RNKGSKPDVVTYNVLINGICK------EGRLD-EAIKFLNNMPSYGCQPNVITHNIILRS 330
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+C R DA KL M GC P+ TF +LI L + +G +++++M G
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y L C +++++A+ + M + G PD TY+ L+T C +VD A + +
Sbjct: 391 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 450
Query: 440 EAVRNG 445
+ G
Sbjct: 451 QLSSKG 456
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
L +G+ Q + +R + + D + +++E C+ A KL+ + N+ P
Sbjct: 226 LCDSGKLKQAMEVLDRQLQKECYP-DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKP 284
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D ++LI G C +G+LDEA + M G + + +N IL + R D
Sbjct: 285 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD----- 339
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
AEK+L DM G +V TFN+LI+ LC+ AI + +M GC PN ++ L
Sbjct: 340 --AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 397
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ + ++ E +D M S G Y LT LC +++ A+ + ++ + G
Sbjct: 398 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+P TY+ ++ + ++A L DE R G++
Sbjct: 458 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 493
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 132/284 (46%), Gaps = 20/284 (7%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S I R G+ + E +E+ G D + +++ C++G A +++ D
Sbjct: 153 TSLIRGFCRIGKTKKATWVMEILEQS-GAVPDVITYNVLISGYCKSGEIDNALQVL-DRM 210
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEA-----KRLAREMYRGGFELGTVAYNCILDCVSKL 281
N + PD + +++ C GKL +A ++L +E Y + Y +++
Sbjct: 211 N-VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPD-----VITYTILIEAT--- 261
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C++ +A K+L +M G +V T+NVLI+ +CK R ++AIK M +GC
Sbjct: 262 CKESGV----GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 317
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T ++++S+ R + ++++ M G + + + LC + +A+
Sbjct: 318 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 377
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ EKM G P+S +Y+ L+ +C ++D+A D V G
Sbjct: 378 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 421
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLL 239
Q + + M R+ G K D + +++ +C+ G A K + + + P+ +++
Sbjct: 269 QAMKLLDEM-RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 327
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
++ C G+ +A++L +M R G V +N + ++ LCR+ L A +L
Sbjct: 328 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL---INFLCRQG----LLGRAIDILE 380
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M +G N ++N L+ CK ++ + AI+ M GC+P+ T+ L+ +L +
Sbjct: 381 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 440
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+V E+++++ S G + Y + L + + E+A+ + ++M+ G PD TY
Sbjct: 441 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 500
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
L++ +VD+A F + G+ ++P
Sbjct: 501 SLVSGLSREGKVDEAIKFFHDL--EGLGIRP 529
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
RLV E+G+ + + +I P C LI+G+C GK +A + + +
Sbjct: 123 RLVRNGELEDGFKFLESMVYRGDIPDIIP----CTSLIRGFCRIGKTKKATWVMEILEQS 178
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + YN + +S C+ E + L ++ V +V T+N ++ LC
Sbjct: 179 GAVPDVITYNVL---ISGYCK-------SGEIDNALQVLDRMNVAPDVVTYNTILRTLCD 228
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ + A+++ R + C+P+ T+ +LI++ + + VG+ +++D M++ G
Sbjct: 229 SGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT 288
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + +C R+++A+ M + G P+ T+++++ C+ R A L + +
Sbjct: 289 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 348
Query: 443 RNG 445
R G
Sbjct: 349 RKG 351
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 126/269 (46%), Gaps = 15/269 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ + + GR + + F M YG + + + +++ +C G AEKL+ D +
Sbjct: 293 INGICKEGRLDEAIKFLNNMP-SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P ++LI C G L A + +M G +++YN +L C++K
Sbjct: 352 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL---HGFCKEK--- 405
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D E + + M G ++ T+N L++ LCK + + A+++ ++ GC P T+
Sbjct: 406 KMDRAIEYLDI-MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 464
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEK 405
+I L + + +++D M+ G K D + + + G+ R +++A+ F
Sbjct: 465 NTVIDGLSKVGKTERAIKLLDEMRRKGL---KPDIITYSSLVSGLSREGKVDEAIKFFHD 521
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
++ G P++ TY+ +M C + D+A
Sbjct: 522 LEGLGIRPNAITYNSIMLGLCKSRQTDRA 550
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 3/160 (1%)
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
K L M Y G ++ LI C+I +++ A + + + G P+ T+ VLI
Sbjct: 135 KFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY 194
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ + +++DRM A + Y L LC +++QAM V ++ PD
Sbjct: 195 CKSGEIDNALQVLDRMNVAPDVV---TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 251
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY +L+ C + V +A L DE G + Y V
Sbjct: 252 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 291
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 19/308 (6%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD+ LG P + + I+ L + L F ME+ G D + ++ L
Sbjct: 707 LVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK-GIVADAVTYNTLISGL 765
Query: 210 CENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C +G + A +L++D +I P+ LI + +G L EAK L +EM R
Sbjct: 766 CNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNI 825
Query: 269 VAYNCILD--CV-SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+ YN +++ C+ +L K F L M G +V T+N LI+ CK +R
Sbjct: 826 LTYNSLINGFCIQGRLGDAKHMFDL----------MVSKGCFPDVVTYNTLITGFCKSKR 875
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
ED +KLF M G + T+ LI QA ++ ++ +RM G Y
Sbjct: 876 VEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNI 935
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L LC +IE+A+ + E ++ + + D TY++++ C +++V +A LF R G
Sbjct: 936 LLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKG 995
Query: 446 VEVKPKEY 453
V++ Y
Sbjct: 996 VKLDAIAY 1003
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 132/319 (41%), Gaps = 43/319 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID L + G L ME+ D + ++ LC +G A ++++D T
Sbjct: 177 IDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRR 236
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI + G LDEA+ L ++M + TV YN + ++ LC +
Sbjct: 237 INPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL---INGLCMHGRLY 293
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM------GE---- 338
A+K M G NV T+N LI+ CK RR ED +KLF RM G+
Sbjct: 294 ----HAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTY 349
Query: 339 ---------------------W----GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
W G P+ T +L+ L +G + M+S
Sbjct: 350 NTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRS 409
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
+G Y + LC +++E+A +F ++ +G PD+ TY +++ C + +
Sbjct: 410 GEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 469
Query: 434 ANALFDEAVRNGVEVKPKE 452
A+ LF +G+ + ++
Sbjct: 470 ADELFRRMKEDGIICQAED 488
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 167/403 (41%), Gaps = 20/403 (4%)
Query: 95 PTPSLVQSTLNFSPEAGRAILGFNHWL---TQNANFSHTDETLSFFTDYFGRRKDFKAIH 151
P PS+V T + A +L +N SH + + F R F ++
Sbjct: 611 PIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRF-SLA 669
Query: 152 DFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
L+ LG + TL S ++ + R + + + M + G + + V+
Sbjct: 670 LALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA-ELGLEPNVVIYNTVIN 728
Query: 208 KLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC+N + A ++ + I D + LI G C G+ +A RL R+M + +
Sbjct: 729 GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDP 788
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+ + ++D K + + EA+ + +M V N+ T+N LI+ C R
Sbjct: 789 NVIFFTALIDTFVK---EGNLL----EAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRL 841
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
DA +F M GC P+ T+ LI ++ RV +G ++ M G Y
Sbjct: 842 GDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTL 901
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ C ++ A VF +M G PD TY++L+ C + +++KA + ++ +N +
Sbjct: 902 IHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQM 961
Query: 447 EVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQI 489
+V Y + + + + K K+ L + RK +L I
Sbjct: 962 DVDIITYNIIIQGMCRN---DKVKEAWCLFRSLTRKGVKLDAI 1001
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 37/302 (12%)
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKIC 236
R V+ F ++ME +G D S +++ C S A ++ + P
Sbjct: 80 RYETVIYFSQQMEL-FGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTF 138
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD---PFRLDSE 293
L+ G+C+ ++ +A L M + G+E V YN ++DC LC+ D L +E
Sbjct: 139 GSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDC---LCKNGDVNIALELLNE 195
Query: 294 AEK-----------------------------VLLDMEYNGVPRNVETFNVLISNLCKIR 324
EK +L DM + +V TF LI K
Sbjct: 196 MEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQG 255
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
++A +L+ +M + PN T+ LI L R+ + D M S G Y
Sbjct: 256 NLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYN 315
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ C R+E M +F++M +G D+ TY+ L+ +C ++ A +F V
Sbjct: 316 TLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSC 375
Query: 445 GV 446
GV
Sbjct: 376 GV 377
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 10/243 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ LC+NG + A +L+ + + + D + L+ G C G+ +A R+ R+M +
Sbjct: 176 LIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKR 235
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
+ ++D K LD EA+++ M + + N T+N LI+ LC
Sbjct: 236 RINPDVFTFTALIDAFVK------QGNLD-EAQELYKQMLQSSIGPNTVTYNSLINGLCM 288
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
R A K F M GC PN T+ LI ++ RV +G ++ RM G
Sbjct: 289 HGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFT 348
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + C + ++ A +F M + G PD T+ +L+ C + + A F++ +
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND-M 407
Query: 443 RNG 445
R+G
Sbjct: 408 RSG 410
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C GKL+ A+++ M G V YN +LDC LC + + EK L
Sbjct: 901 LIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDC---LCN-------NGKIEKAL 950
Query: 299 L---DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+ D++ N + ++ T+N++I +C+ + ++A LF + G + ++ +I L
Sbjct: 951 VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+ E D++ RMK G+ ++ Y E L
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMPSERIYDETL 1042
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 52/295 (17%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS----LRLVVEKLCENGYASYAEK 220
T + I L +GR T R+ RD KR D +++ + G A+
Sbjct: 757 TYNTLISGLCNSGRWTDA----ARLLRDM-VKRKIDPNVIFFTALIDTFVKEGNLLEAKN 811
Query: 221 LVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L K+ + P+ + LI G+C+ G+L +AK + M G V YN + ++
Sbjct: 812 LYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTL---IT 868
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
C+ K R++ + K+ +M + G+ + T+N LI C+ + A K+F RM +
Sbjct: 869 GFCKSK---RVE-DGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 924
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ T+ +L+ L ++ + M++ ++ + Y + +C +++++A
Sbjct: 925 GVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEA 984
Query: 400 MSVFE-----------------------------------KMKTDGHNPDSETYD 419
+F +MK DG P YD
Sbjct: 985 WCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A + L+M + +V F L++ + +RR E I +M +G + +F +LI
Sbjct: 48 DALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILI 107
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ +R+ ++ +M GY + L C RI A S+ M G+
Sbjct: 108 HCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE 167
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P+ Y+ L+ C + V+ A L +E + G
Sbjct: 168 PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D K + D +V T + I ++ R + F M G D +
Sbjct: 839 GRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ-GLVGDAFT 897
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ C+ G + A+K+ + P D + ++L+ C +GK+++A + ++
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ ++ + YN I + +CR EA + + GV + + +IS L
Sbjct: 958 KNQMDVDIITYNII---IQGMCRNDKV----KEAWCLFRSLTRKGVKLDAIAYITMISGL 1010
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTF 348
C+ +A KL RM E G P+E +
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMPSERIY 1038
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 7/218 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LI G+C + +DEA L +EM++ G V Y+ ++D + K R +
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L E M G+P NV T+N LI LCK + AI LF +M + G P TF
Sbjct: 395 DLIDE-------MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTF 447
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ L + R+ + E + + GY + Y + C +E+A+++ KM+
Sbjct: 448 TILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEE 507
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+G P++ T+D+++ + DKA L + + G+
Sbjct: 508 NGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 29/280 (10%)
Query: 205 VVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+ S A L + TA I D LI G+C+ KL EA L EM
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT 264
Query: 264 FELGTVAYNCILDCVSK----------------LCRKKDPFRLDS------------EAE 295
YN ++D + K C K D + +A+
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQ 324
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
V M GV +V ++ +LI+ CK + ++A+ LF M + P T+ LI L
Sbjct: 325 HVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ R+ ++ID M+ G Y + LC +++A+++F KMK G P S
Sbjct: 385 CKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCS 444
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
T+ +L+ C R+ A F + + G + +Y V
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNV 484
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD ++LI +C G++ + ++ + G++ T+ + + + LC K
Sbjct: 90 IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTL---IKGLCLKGQVN 146
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +K+L G+ + ++ LI+ +CKI + AIKL ++ PN +
Sbjct: 147 KALHFHDKLLAQ----GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMY 202
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I +L + V E + M + G + Y + C ++++A+ + +M
Sbjct: 203 NTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL 262
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
NP+ TY++L+ C +V +A + AV VKP
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKNVL--AVMLKACVKP 302
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 7/185 (3%)
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ +N ILD +K+ L +E G+ ++ T N+LI+ C + +
Sbjct: 60 IQFNKILDSFAKIKHYSTAVSLSHR-------LELKGIQPDLITLNILINCFCHMGQITF 112
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+ ++ + G P+ TF LIK L +V + D++ + G + Y +
Sbjct: 113 GFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLIN 172
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+C I A+ + K+ P+ E Y+ ++ C + V +A LF E G+
Sbjct: 173 GVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISA 232
Query: 449 KPKEY 453
Y
Sbjct: 233 DVVTY 237
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 15/285 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T ++RL + R L E M G K D V+ LC+ A EK
Sbjct: 116 TYGPIVERLCKTKRIDDALATVEEMATR-GIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 174
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+VK N P+ + LI G C +++ A L +EM G+ V+YN ++D
Sbjct: 175 MVKQRIN---PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID---G 228
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
C+KKD +K++ N VP NV T+ LI L K + + A ++ M + G
Sbjct: 229 FCKKKDLVAAKDVFDKMV---RSNCVP-NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ LI + RV E +++++M + G A Y L LC +++E A
Sbjct: 285 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 344
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+F M +P TY+ L+ C H ++D A+ L+ E + G
Sbjct: 345 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 389
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 126/305 (41%), Gaps = 8/305 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + K ++ +V+ L I L + G + M R FKR +
Sbjct: 24 GRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM-RLKRFKRKAIA 82
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ LC+ A +L++ A PD +++ C ++D+A EM
Sbjct: 83 YSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMAT 142
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G + YN +L S LC+++ EA + M + NV T+N LI+ LC
Sbjct: 143 RGIKPDAFIYNFVL---SGLCQEEKV----EEARLLFEKMVKQRINPNVVTYNTLINGLC 195
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K R E A +LF M G P E ++ LI + + ++ D+M +
Sbjct: 196 KAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVV 255
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + L +++ A V + M G P+ TY L+ +C RVD+A+ L ++
Sbjct: 256 TYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQM 315
Query: 442 VRNGV 446
V G+
Sbjct: 316 VTQGI 320
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 8/217 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + + G+ G+L++ K + + M G+ L Y ++ C+ K+ F
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKV----GNF 61
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA K+L M R ++ +I+ LCK+ R E+A +L +M + P+ T+
Sbjct: 62 ---DEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTY 117
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+++ L + R+ + ++ M + G Y L+ LC E++E+A +FEKM
Sbjct: 118 GPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVK 177
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
NP+ TY+ L+ C R++ A LF E G
Sbjct: 178 QRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 9/250 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + I+ L +A R F+ M G+ + S +++ C+ A+ + K
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ LI G GK+ A + M + G Y+C++D K+ R
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV-R 303
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ D EA K+L M G+ V T+N+L+++LC+ + EDA KLF M + CHP
Sbjct: 304 RVD------EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 357
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ L+++L ++ + M + G Y L ++ +A +
Sbjct: 358 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 417
Query: 404 EKMKTDGHNP 413
EKMK NP
Sbjct: 418 EKMKLTKRNP 427
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
TFN + K R E +++ M E G + + +LI L + E +++ M
Sbjct: 12 TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ + Y + LC + R+E+A + EKM PD+ TY ++ + C R+
Sbjct: 72 RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCKTKRI 130
Query: 432 DKANALFDEAVRNGVE 447
D A A +E G++
Sbjct: 131 DDALATVEEMATRGIK 146
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 143/354 (40%), Gaps = 20/354 (5%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV-----RAGRPT 180
FSH ++L + + F + L D L P L+ + L+ RA P
Sbjct: 124 GFSHHPDSLLVLANSLAGARLFPLLRSLLSD----LPPSALSRGLFPLLFRAYSRARLPE 179
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLI 240
+ F M +GF ++ L NG Y E+ ++++ + K +LI
Sbjct: 180 DAIRAFSSMA-GFGFPPTIADFHSLLFALSRNGLVEYGERFFRESSAQFDVSAKAYTILI 238
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
GW V K + A+ L EM G EL YN ++D LCR D + S E++
Sbjct: 239 SGWAVVKKPENARSLFDEMVERGVELDVHVYNALIDA---LCRGGD---ITSAQEQLSNM 292
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+ +G+ N T+ + C + A+++ RM PN T+ +I+ L
Sbjct: 293 QKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGE 352
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E ++D + + G Y L C ++ + +A+ + +M + PD +Y++
Sbjct: 353 INEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNM 412
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
L+ R D A ++D + G Y V + +A KKG+ +
Sbjct: 413 LLKMLIGVGRFDTAIEVWDGMEKRGFHPGAATYAV----MIHGLASKKGRAEDA 462
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 163/389 (41%), Gaps = 38/389 (9%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S + + +V+ LN AG F W + ++ H+ + + + +K +
Sbjct: 58 SGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLM 117
Query: 151 HDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
D + + K++L +T + + RA + + + F ME+ Y + + ++
Sbjct: 118 WDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEK-YDLPPNLVAFNGLLSA 176
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
LC++ A+++ ++ + PD K +L++GW + L +A+ + REM G
Sbjct: 177 LCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDI 236
Query: 269 VAYNCILDCVSK---------LCRKKDPF--------------------RLDSEAEKVLL 299
V Y+ ++D + K + R DP RL+ EA L
Sbjct: 237 VTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE-EAVDTFL 295
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+ME +G+ +V FN LI CK R ++ ++ M G PN + ++++ L +
Sbjct: 296 EMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIER- 354
Query: 360 RVGEGDEMIDRM-KSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSET 417
GE DE D K D Y + ++ C + +E A V++ M+ G P T
Sbjct: 355 --GEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 412
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ +L+ C KA L +E + G+
Sbjct: 413 FSVLINGLCEERTTQKACVLLEEMIEMGI 441
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 19/241 (7%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++++ + K+DEA M + VA+N +L S LC+ K+ +A++V
Sbjct: 137 IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLL---SALCKSKNV----RKAQEV 189
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M P + +T+++L+ K A ++F M + GCHP+ T+ +++ L +
Sbjct: 190 FENMRDRFTP-DSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 248
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKD--YYEFLTRLCGIE-RIEQAMSVFEKMKTDGHNPD 414
A RV DE + ++S +I K Y L G E R+E+A+ F +M+ G D
Sbjct: 249 AGRV---DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 305
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
++ L+ +C NR+ + E GV K + R+L +++G+K E
Sbjct: 306 VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHL-----IERGEKDEA 360
Query: 475 L 475
Sbjct: 361 F 361
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKI 235
R + + F MER G K D ++ C+ +++K+ ++ + P+ K
Sbjct: 285 NRLEEAVDTFLEMERS-GMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 343
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
C+++++ G+ DEA + R+M + E Y + + C KK+ A+
Sbjct: 344 CNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMV---IKMFCEKKEM----ETAD 395
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
KV M GV ++ TF+VLI+ LC+ R ++ A L M E G P+ TF
Sbjct: 396 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 448
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 149/309 (48%), Gaps = 22/309 (7%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + I D++ T +S +D L +AGR T+ LG+FE+M RD +
Sbjct: 662 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA 721
Query: 202 LRLVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+++ LC+ G A E++++ A I PD +LI G C G++D L
Sbjct: 722 YSALIDGLCKAGRIDEAYEFLERMIR--AGRI-PDVVTFSILINGLCDAGRIDTGLELFC 778
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
M G + AYN + ++ C K + S A +L +M+ +G+ +N T ++I
Sbjct: 779 GMAERGCKADIYAYNAM---INAYCLKGEF----SAAYALLEEMKTHGIAKNTVTHGIVI 831
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LC R ++A+ F+ + E C +E ++ LI SL + R + E++ M + G
Sbjct: 832 KALCGNDRIDEAVSYFHSIPE-DCR-DEISYNTLITSLVASRRSEQALELLRAMVADG-- 887
Query: 378 IGKKDYYEFLTRLCGIERI---EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G D ++T + G+ + E A + ++M++ GH+PD TY ++++ ++ A
Sbjct: 888 -GSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946
Query: 435 NALFDEAVR 443
F+E +R
Sbjct: 947 CDYFEEMLR 955
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 10/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L + + + L +M + G + + + VV+ L + G A +++
Sbjct: 545 TYSTLIDGLSKMAKMDEALQLLAKM-VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 603
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + LI G+ +L EA L REM GF V Y + LCR
Sbjct: 604 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL---CHGLCR 660
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG-EWGCH 342
R D EA ++L M G N T++ ++ LCK R +A+ F +M +
Sbjct: 661 SG---RFD-EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 716
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ + LI L +A R+ E E ++RM AG + + LC RI+ + +
Sbjct: 717 PHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 776
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
F M G D Y+ ++ +C A AL +E +G+
Sbjct: 777 FCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGI 820
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 15/299 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L+ GR + ERM + G + + L+++ LC+ G A ++V +
Sbjct: 73 TYNTLVNALLGQGRAKEAFSLLERMAAN-GCPPELITFGLIIKGLCKEGEIEAAFRVVDE 131
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ F PD +I +L+ C G++DEA +++ GF V YN ++D + K
Sbjct: 132 MVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYK--- 188
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
RL++ + L E P V TF + + L K A + F M + G P
Sbjct: 189 ---AGRLEAAGMVLQLLAESFSSP-TVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP 244
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L +A ++ D + ++ G + L LC R+E+A+ +
Sbjct: 245 NTVTYDALIDGLCKAGKL---DIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+ M P+ ++ LM C RVD+A LFD +G Y + + L K
Sbjct: 302 KAMPC---VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCK 357
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 137/341 (40%), Gaps = 36/341 (10%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I L AGR Q +ERM G ++ + ++E LC+ G + E+ +
Sbjct: 383 TFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQ 442
Query: 225 T--------------ANEI-FPDDKIC-------DLLIKGWCVDGKLDEAKRLAREMYRG 262
+ E+ F ++C + L+ G G + +A L M
Sbjct: 443 MLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIES 502
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + +N +LD LC+++ +A V G NV T++ LI L K
Sbjct: 503 GLSPDVITFNSVLD---GLCKEQRIL----DAHNVFKRALERGCRPNVVTYSTLIDGLSK 555
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ + ++A++L +M E GC N T+ ++ L + R+ + ++ +M+ AG
Sbjct: 556 MAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVT 615
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + +R+ +A+ + +M G +P TY L C R D+A + D
Sbjct: 616 YNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMA 675
Query: 443 RNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLP--EKMAR 481
G Y L K G+ E L EKMAR
Sbjct: 676 ARGCAPNAITYSSIVDGL-----CKAGRVTEALGYFEKMAR 711
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + ++ G C + ++ +A + + G V Y+ ++D +SK+ +
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM------ 559
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA ++L M G N T++ ++ L K+ R EDA+ + +M + GC P+ T+
Sbjct: 560 -DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 618
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI ++ R+ E ++ M AG+ Y LC R ++A+ + + M G
Sbjct: 619 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P++ TY ++ C RV +A F++ R+ V
Sbjct: 679 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 714
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 7/202 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++LI G C G++ +A R+ + GF V Y+ ++D LCR + + K
Sbjct: 5 NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVID---GLCRDNEV----DKGCK 57
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L +M G N T+N L++ L R+++A L RM GC P TF ++IK L
Sbjct: 58 LLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLC 117
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ + ++D M G+ + + L LC + R+++A F+++ G PD+
Sbjct: 118 KEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAV 177
Query: 417 TYDLLMTKWCAHNRVDKANALF 438
TY+ ++ R++ A +
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVL 199
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 8/275 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ +D L++ GR + +M RD G D + +++ + A L+++
Sbjct: 580 TYSTVVDGLLKVGRMEDAVVVLRQM-RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 638
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
F P L G C G+ DEA + M G + Y+ I+D + K R
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EK+ D V +V ++ LI LCK R ++A + RM G P
Sbjct: 699 VTEAL---GYFEKMARD---EVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIP 752
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF +LI L A R+ G E+ M G Y + C A ++
Sbjct: 753 DVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALL 812
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
E+MKT G ++ T+ +++ C ++R+D+A + F
Sbjct: 813 EEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYF 847
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ D LI G C GKLD A L R+ + G A++ +L LC+
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNS---QAGMFAFSSLL---HGLCQAH--- 292
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL+ EA ++L M VP NV FN L++ LC+ RR ++A +LF M E GC + T+
Sbjct: 293 RLE-EAIQLLKAMPC--VP-NVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITY 348
Query: 349 LVLIKSLYQAARVGEGDEMIDRM-KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM- 406
+L+K L + R+ E ++ M ++ G + + + LC R+ QA V+E+M
Sbjct: 349 NILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408
Query: 407 KTDGHNPDSETYDLLMTKWC 426
+G +P+ TY L+ C
Sbjct: 409 AVEGISPNRFTYAFLLEGLC 428
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+NVLI+ LCK R DA F + ++G P T+ +I L + V +G ++++ M
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G A Y + L G R ++A S+ E+M +G P+ T+ L++ C +
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 432 DKANALFDEAVRNG 445
+ A + DE V G
Sbjct: 123 EAAFRVVDEMVDRG 136
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 42/235 (17%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C D ++D+ +L EM G V YN +++ + R K+ F L L
Sbjct: 42 VIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSL-------L 94
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M NG P + TF ++I LCK E A ++ M + G P+ VL+ +L +
Sbjct: 95 ERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCEL 154
Query: 359 ARVGEG-------------------DEMID------RMKSAGYAI-------GKKDYYEF 386
RV E + M+D R+++AG + + F
Sbjct: 155 GRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTF 214
Query: 387 LTRLCGIER---IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ G+ + + A F+ M G +P++ TYD L+ C ++D A L
Sbjct: 215 TIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL 269
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 20/268 (7%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG----YASYAEKLVKDTANEIFPD 232
G + E M + +G ++ + +V++ LC N SY + +D +EI +
Sbjct: 803 GEFSAAYALLEEM-KTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYN 861
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
LI + ++A L R M G Y ++D L + P
Sbjct: 862 T-----LITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMD---GLFKAGSP----E 909
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A K+L +M G ++ T+ ++IS L K ++ A F M P+ + LI
Sbjct: 910 VAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLI 969
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ +A +V D+ ++S+G Y + LC ++A+ V +MK+
Sbjct: 970 DAFCKADKV---DDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCE 1026
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDE 440
P + L T + A RVD+A L ++
Sbjct: 1027 PGIHIWTSLATAYVAEGRVDEAVKLVND 1054
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 150/422 (35%), Gaps = 61/422 (14%)
Query: 87 HLIFSHVTPTPSLVQSTLNFSPEAGR-AILGFNHWLTQNANFSHTDETLSFFTDYFGRRK 145
++ TP + ++ +AGR G L + S T T + D +
Sbjct: 166 QVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAG 225
Query: 146 DFKAIHDFLVDNKEV-LGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+ ++F + + P T+ + ID L +AG+ LG RD + +
Sbjct: 226 NLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL----RDKNSQAGMFAF 281
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++ LC+ A +L+K A P+ + L+ G C ++DEA L M
Sbjct: 282 SSLLHGLCQAHRLEEAIQLLK--AMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKES 339
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFR------------------------------LDS 292
G + YN +L + KL R + +R ++
Sbjct: 340 GCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQ 399
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM--GEW----------- 339
E + G+ N T+ L+ LCK S + F +M EW
Sbjct: 400 AWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSP 459
Query: 340 --------GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
C P T+ L+ L ++ V + +++ M +G + + L LC
Sbjct: 460 EVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLC 519
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+RI A +VF++ G P+ TY L+ ++D+A L + V G
Sbjct: 520 KEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV 579
Query: 452 EY 453
Y
Sbjct: 580 TY 581
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 99/243 (40%), Gaps = 28/243 (11%)
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
DE +S+F H D ++ + TL I LV + R Q L M
Sbjct: 841 DEAVSYF-------------HSIPEDCRDEISYNTL---ITSLVASRRSEQALELLRAMV 884
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKL 249
D G D + V++ L + G A KL+++ + PD + ++I G +L
Sbjct: 885 ADGG-SPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQL 943
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
A EM R + + Y+ ++D K + D ++L + +G+
Sbjct: 944 PLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL----------LRSSGIEPT 993
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
+ ++ ++ +LCK R ++ A+++ M C P + L + RV E ++++
Sbjct: 994 ITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVN 1053
Query: 370 RMK 372
++
Sbjct: 1054 DLQ 1056
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 134/306 (43%), Gaps = 12/306 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G+ K + + L + V T I ++G L +RM D
Sbjct: 105 IGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN----VAPDVV 160
Query: 201 SLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++ LC++G A E L + E +PD +LI+ C + + +A +L EM
Sbjct: 161 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 220
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G + V YN +++ + K RLD EA K L +M G NV T N+++ +
Sbjct: 221 RNKGSKPDVVTYNVLINGICK------EGRLD-EAIKFLNNMPSYGCQPNVITHNIILRS 273
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+C R DA KL M GC P+ TF +LI L + +G +++++M G
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y L C +++++A+ + M + G PD TY+ L+T C +VD A + +
Sbjct: 334 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393
Query: 440 EAVRNG 445
+ G
Sbjct: 394 QLSSKG 399
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
L +G+ Q + +R + + D + +++E C+ A KL+ + N+ P
Sbjct: 169 LCDSGKLKQAMEVLDRQLQKECYP-DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKP 227
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D ++LI G C +G+LDEA + M G + + +N IL + R D
Sbjct: 228 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD----- 282
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
AEK+L DM G +V TFN+LI+ LC+ AI + +M GC PN ++ L
Sbjct: 283 --AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 340
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ + ++ E +D M S G Y LT LC +++ A+ + ++ + G
Sbjct: 341 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+P TY+ ++ + ++A L DE R G++
Sbjct: 401 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 436
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 20/284 (7%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S I R G+ + E +E+ G D + +++ C++G A + V D
Sbjct: 96 TSLIRGFCRIGKTKKATWVMEILEQS-GAVPDVITYNVLISGYCKSGEIDNALQ-VLDRM 153
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEA-----KRLAREMYRGGFELGTVAYNCILDCVSKL 281
N + PD + +++ C GKL +A ++L +E Y + Y +++
Sbjct: 154 N-VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPD-----VITYTILIEAT--- 204
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C++ +A K+L +M G +V T+NVLI+ +CK R ++AIK M +GC
Sbjct: 205 CKESGV----GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 260
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T ++++S+ R + ++++ M G + + + LC + +A+
Sbjct: 261 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 320
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ EKM G P+S +Y+ L+ +C ++D+A D V G
Sbjct: 321 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 364
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLL 239
Q + + M R+ G K D + +++ +C+ G A K + + + P+ +++
Sbjct: 212 QAMKLLDEM-RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 270
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
++ C G+ +A++L +M R G V +N + ++ LCR+ L A +L
Sbjct: 271 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL---INFLCRQG----LLGRAIDILE 323
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M +G N ++N L+ CK ++ + AI+ M GC+P+ T+ L+ +L +
Sbjct: 324 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 383
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+V E+++++ S G + Y + L + + E+A+ + ++M+ G PD TY
Sbjct: 384 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 443
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
L++ +VD+A F + G+ ++P
Sbjct: 444 SLVSGLSREGKVDEAIKFFHDL--EGLGIRP 472
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD C LI+G+C GK +A + + + G + YN + +S C+
Sbjct: 89 IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVL---ISGYCK------ 139
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
E + L ++ V +V T+N ++ LC + + A+++ R + C+P+ T+
Sbjct: 140 -SGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYT 198
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+LI++ + + VG+ +++D M++ G Y + +C R+++A+ M +
Sbjct: 199 ILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 258
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ T+++++ C+ R A L + +R G
Sbjct: 259 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 126/269 (46%), Gaps = 15/269 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ + + GR + + F M YG + + + +++ +C G AEKL+ D +
Sbjct: 236 INGICKEGRLDEAIKFLNNMP-SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P ++LI C G L A + +M G +++YN +L C++K
Sbjct: 295 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL---HGFCKEK--- 348
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D E + + M G ++ T+N L++ LCK + + A+++ ++ GC P T+
Sbjct: 349 KMDRAIEYLDI-MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 407
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEK 405
+I L + + +++D M+ G K D + + + G+ R +++A+ F
Sbjct: 408 NTVIDGLSKVGKTERAIKLLDEMRRKGL---KPDIITYSSLVSGLSREGKVDEAIKFFHD 464
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
++ G P++ TY+ +M C + D+A
Sbjct: 465 LEGLGIRPNAITYNSIMLGLCKSRQTDRA 493
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 3/160 (1%)
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
K L M Y G ++ LI C+I +++ A + + + G P+ T+ VLI
Sbjct: 78 KFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY 137
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ + +++DRM A + Y L LC +++QAM V ++ PD
Sbjct: 138 CKSGEIDNALQVLDRMNVAPDVV---TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 194
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY +L+ C + V +A L DE G + Y V
Sbjct: 195 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 234
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
F + F + DF D + K + + LV + F++ M R+ G
Sbjct: 103 FDSLRVFHKMKDFDCDPSQ----KAYVTVLAILVEENQLNLAFKFYKNM-REIGLPPTVA 157
Query: 201 SLRLVVEKLCEN-GYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
SL ++++ LC N G K+ + PD LI G C G++DEAK+L E
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M V Y + ++ LC K+ EA + L +M+ G+ NV T++ L+
Sbjct: 218 MVEKDCAPTVVTYTSL---INGLCGSKNV----DEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LCK RS A++LF M GC PN T+ LI L + ++ E E++DRM G
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
Y + ++ C I + +A + ++M G P+ T+++
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 154/358 (43%), Gaps = 16/358 (4%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNAN-FSHTDETLSFFTDYFGRRKDFKAIHDFL 154
TPS V + + +++ F+ + AN + H + + FKA D +
Sbjct: 15 TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74
Query: 155 VDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
V K V+ L S R RP L F +M +D+ + + V+ L E
Sbjct: 75 VRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM-KDFDCDPSQKAYVTVLAILVE 133
Query: 212 NGYASYAEKLVKDTANEIF--PDDKICDLLIKGWC-VDGKLDEAKRLAREMYRGGFELGT 268
+ A K K+ EI P ++LIK C DG +D ++ EM + G + +
Sbjct: 134 ENQLNLAFKFYKNM-REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDS 192
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
Y + +S LCR F EA+K+ +M V T+ LI+ LC + ++
Sbjct: 193 YTYGTL---ISGLCR----FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A++ M G PN T+ L+ L + R + E+ + M + G Y +T
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC ++I++A+ + ++M G PD+ Y +++ +CA ++ +A DE + G+
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGI 363
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 255 LAREMYRGGFELG---TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
LA + Y+ E+G TVA +L + LCR K+ L+M G +
Sbjct: 139 LAFKFYKNMREIGLPPTVASLNVL--IKALCRNDGTV---DAGLKIFLEMPKRGCDPDSY 193
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+ LIS LC+ R ++A KLF M E C P T+ LI L + V E ++ M
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
KS G Y + LC R QAM +FE M G P+ TY L+T C ++
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 432 DKANALFDEAVRNGVE 447
+A L D G++
Sbjct: 314 QEAVELLDRMNLQGLK 329
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 3/207 (1%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVK 223
T +S +D L + GR Q + FE M G + + + ++ LC E E L +
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMM-MARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR 322
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + +I G+C K EA EM GG + +N + +++ R
Sbjct: 323 MNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVR 382
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
S A + L M G+ VET L+ LCK + A++L + GC P
Sbjct: 383 GLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIP 441
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDR 370
++ T+ +LI VGE + + R
Sbjct: 442 SKGTWKLLIGHTLDKTIVGEASDTLLR 468
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 127/317 (40%), Gaps = 56/317 (17%)
Query: 153 FLVDNKEVLGPKTLASCIDRLVRA-----GRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
F + +E+ P T+AS ++ L++A G L F M + G D + ++
Sbjct: 143 FYKNMREIGLPPTVAS-LNVLIKALCRNDGTVDAGLKIFLEMPKR-GCDPDSYTYGTLIS 200
Query: 208 KLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC G A+KL + + P LI G C +DEA R EM G E
Sbjct: 201 GLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP 260
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
Y+ ++D LC KD L +A ++ M G N+ T+ LI+ LCK ++
Sbjct: 261 NVFTYSSLMD---GLC--KDGRSL--QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG----DEMI------DR------ 370
++A++L RM G P+ + +I ++ E DEMI +R
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 373
Query: 371 -------------------------MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
M+S G ++ + + LC ++A+ + ++
Sbjct: 374 VKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDE 433
Query: 406 MKTDGHNPDSETYDLLM 422
+ TDG P T+ LL+
Sbjct: 434 IVTDGCIPSKGTWKLLI 450
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 133/310 (42%), Gaps = 15/310 (4%)
Query: 141 FGRRKD-FKAIHDFLVDN--KEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
GR D + + D L +N +V+ TL I R G + F+ + Y F
Sbjct: 352 LGRMSDAMQQLSDMLANNLLPDVVSYNTL---IYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+ +++ LC G A++L + NE I PD +L+ G C G L A+
Sbjct: 409 IV-TYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM G EL + AY + KL F L E M G P ++ +NV+
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE-------MLAKGFPPDLIIYNVV 520
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ LCK+ E+A +L +M G P+ T+ +I + + R+ +G E+ M S G
Sbjct: 521 VDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL 580
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + G R+E+A F +M+ G P+ TY+ L+ C R+D+A
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640
Query: 437 LFDEAVRNGV 446
F E V G+
Sbjct: 641 FFAEMVEKGI 650
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 8/267 (2%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD 246
R ++G K + +++ C+ G L+ + P+D ++LI G
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+ ++AK L EM + G ++ YN ++ + L E M G
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEE-------MVLKGA 335
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
V T+N I LCK+ R DA++ M P+ ++ LI + + +
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ D ++S Y L LC +E A + +M +G PD TY +L+ C
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC 455
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEY 453
+ A FDE + G+E+ Y
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAY 482
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 46/250 (18%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF D +VV+ LC+ G A +L+ K ++ + PD +I +G+L +
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ + EM G V Y ++ + R + F SE M+ G+ NV T
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE-------MQEKGILPNVIT 621
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI+ LCK+RR + A F M E G PN+ ++ +LI
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN------------------- 662
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW---CAHN 429
C + ++A+S++++M G PDS T+ L+ + C
Sbjct: 663 ----------------ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706
Query: 430 RVDKANALFD 439
V + +L D
Sbjct: 707 AVRQLESLLD 716
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 10/225 (4%)
Query: 216 SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
S +K++K + + PD K C+ +++ + +A + R M G + V YN +L
Sbjct: 185 SVFDKMIK---SRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLL 241
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
D K + + L SE M+ G N T+NVLI+ L K E A L
Sbjct: 242 DSYCKGGKVQQGLDLLSE-------MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M + G + T+ LI + + E + + M G + Y F+ LC + R
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ AM M + PD +Y+ L+ +C + KA LFDE
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 113/283 (39%), Gaps = 22/283 (7%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EKLVKDTANEIFP--- 231
P L F E GF+R + ++E L +N A E+++ + I
Sbjct: 95 PRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLI 154
Query: 232 --------DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
KI DLLI + +++ + +M + L NC + + ++ R
Sbjct: 155 GGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKS--RLSPDVKNC--NRILRILR 210
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
KD L S+A +V M G+ + T+N L+ + CK + + + L M GC P
Sbjct: 211 DKD---LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAP 267
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N+ T+ VLI L + + +I M G + Y + + +A+S+
Sbjct: 268 NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQ 327
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E+M G +P TY+ + C R+ A + + N +
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNL 370
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 151/390 (38%), Gaps = 47/390 (12%)
Query: 109 EAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI-----------HDFLVDN 157
+ G ++ +N + S DE D GRR I D L D
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA 321
Query: 158 KEVL--------GPK--TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVV 206
V+ P T +D L +AG+ + E M E+D D + ++V
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA--PDVVTYSILV 379
Query: 207 EKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
LC+ G A L++ P+ + +I G+C GK+DE ++ M
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRL----------------------DSEAEKVLLDMEY 303
V Y+ ++D K R +D F + EA++V+ M
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTK 499
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G P + ++I LC + R ++A+K+ M E GC PN T+ +LI L + RV +
Sbjct: 500 QGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVED 559
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++D M G Y + C I +++ A F+ M+ G PD Y++L++
Sbjct: 560 AINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILIS 619
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+C V+KA + + G Y
Sbjct: 620 GFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 11/281 (3%)
Query: 161 LGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASY 217
L P T+A + ++ L + + +V E M + G + D S VV LCE+G Y
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEM-VEAGREPDTFSYNTVVACLCESGKYEEA 251
Query: 218 AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+ L K + PD + L+ G+C K+DEA+RL +M + Y ++
Sbjct: 252 GKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGG 311
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
S+ R D +R V+ DM G+ ++ T+N L+ LCK + E+A +L M
Sbjct: 312 FSRADRLADAYR-------VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E C P+ T+ +L+ L + +V + +++ M G + + C +++
Sbjct: 365 EKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD 424
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ V E MK PD TY L+ +C NR+ A A+
Sbjct: 425 EGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 210 CENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ A KL+ K + + PD + L+ G C +L+E +L EM G E T
Sbjct: 173 CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+YN ++ C LC EA K+L M +V T+N L+ CK+ + ++
Sbjct: 233 FSYNTVVAC---LCESGKY----EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDE 285
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A +L M C P T+ LI +A R+ + +++ M AG + Y L
Sbjct: 286 AERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLD 345
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
LC ++E+A + E M PD TY +L+ C +VD A L + + G +
Sbjct: 346 GLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQ 404
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD +++G C GK++EA+ + M + G + Y I + LC D
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALI---IGGLC---DVE 520
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R D EA K+L M G N+ T+++LI+ LCK +R EDAI + M E GC P+ T+
Sbjct: 521 RGD-EALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + ++ + M+ +G K Y ++ C +E+A+ V + M
Sbjct: 580 TSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLE 639
Query: 409 DGHNPDSETYDLLM 422
G NPD+ TY LM
Sbjct: 640 KGCNPDAATYFSLM 653
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI G C ++DEA +L EM + YNC+ ++ LC+ ++D+ +
Sbjct: 97 ILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCL---IAGLCKMG---KIDAARNVL 150
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ +E + VP +V T+ LI C+ ++A KL +M E G P+ + L+ L +
Sbjct: 151 KMMLERSCVP-DVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
++ E ++++ M AG Y + LC + E+A + EKM PD T
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVT 269
Query: 418 YDLLMTKWCAHNRVDKANALFDEAV 442
Y+ LM +C +++D+A L ++ V
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMV 294
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+ +LI LC+ +R ++A +L M + CHP+ + LI L + ++ ++ M
Sbjct: 94 TYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMM 153
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
Y + C +++A + EKMK G PD+ Y+ L+ C N++
Sbjct: 154 LERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL 213
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET--LPEKMARKR 483
++ + L +E V G E Y L + GK E + EKM K+
Sbjct: 214 EEVSKLLEEMVEAGREPDTFSYNTVVACL-----CESGKYEEAGKILEKMIEKK 262
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 18/262 (6%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T + D F + H L KEV P T ++ ID +A R
Sbjct: 409 TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL--- 465
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGK 248
G DK S ++E LC G A++++ T P L+I G C +
Sbjct: 466 ----GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVER 521
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
DEA ++ + M G E Y+ + ++ LC+ K R++ +A VL M G
Sbjct: 522 GDEALKMLQVMSERGCEPNLYTYSIL---INGLCKTK---RVE-DAINVLDVMLEKGCVP 574
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+ LI CKI + + A + F M + GC P++ + +LI Q+ V + E++
Sbjct: 575 DVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVM 634
Query: 369 DRMKSAGYAIGKKDYYEFLTRL 390
M G Y+ + L
Sbjct: 635 QLMLEKGCNPDAATYFSLMRSL 656
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 8/308 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T A+ + RL AG L R + D + +V C+ G + A ++ +
Sbjct: 4 TTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDE 63
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P++ L+ G+ G+ ++ L EM RGG E YNC+ + + CR
Sbjct: 64 MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCL---IGEWCR 120
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ R A + +M G+ RNV ++N LI+ LC+ + DA KL M G P
Sbjct: 121 TGEFER----ARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP 176
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF +L+ +A ++ ++MK+AG+ Y + C + +A
Sbjct: 177 SIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRAL 236
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
MK G P TY +L+ + N + KA + + G+EV Y V R L
Sbjct: 237 SDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCME 296
Query: 464 IAVKKGKK 471
+K +K
Sbjct: 297 GNMKDARK 304
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 116/287 (40%), Gaps = 9/287 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKI 235
G+ + FE M R G + + + ++ + C G A L + I +
Sbjct: 87 GQREKGFALFEEMRRG-GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVS 145
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ LI G C GKL +A +L M G + +N ++D K + S A
Sbjct: 146 YNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM-------SNAL 198
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
M+ G + T+N+LI+ C+ R A + M E G P + T+ +LI S
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ +G+ E++ M+ AG + Y + LC ++ A +F+ M G P +
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
YD+++ + KA L E + G+ Y + R L K
Sbjct: 319 VIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCK 365
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 36/271 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I R G + F+ M G R+ S ++ LC +G A KL+ E
Sbjct: 115 IGEWCRTGEFERARSLFDEMPV-RGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEG 173
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P +LL+ G+ GK+ A +M GF+ V YN + ++ CR +D
Sbjct: 174 TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNML---IAGFCRARDMT 230
Query: 289 R-----------------------LDS--------EAEKVLLDMEYNGVPRNVETFNVLI 317
R +DS +A ++L ME G+ + T+ VL+
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LC +DA KLF MGE G P+ + ++I + + ++I M+ G
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLI 350
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
Y + LC ++ ++A ++ + M+T
Sbjct: 351 PNSASYGLTIRVLCKDDKCQEAEALLDDMET 381
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 30/298 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANE 228
I L GR + L + M G + + +++E +C++ G+ E L + A
Sbjct: 152 IRGLCDRGRVGEALSLLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 210
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +++I G C +G++D+A+ + GF+ TV+Y +L + R +D
Sbjct: 211 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270
Query: 289 RLDSE----------------------------AEKVLLDMEYNGVPRNVETFNVLISNL 320
L +E A +VL M +G N N++I+ +
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R +DA + MG +GC P+ ++ ++K L +A R + E++ M +
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ F+ LC IEQA + E+M G + TY+ L+ +C RVD A LF
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 20/279 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-----ENGYASYAEKLVKD 224
I+ + R GR F R+ YGF+ D S V++ LC E+ +AE + K+
Sbjct: 222 INGMCREGRVDDAREFLNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
P++ D+L++ +C G ++ A ++ +M G T N +++ + K R
Sbjct: 281 C----MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D F+ L +M G + ++ ++ LC+ R EDA +L M C PN
Sbjct: 337 DDAFQF-------LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
E TF I L Q + + +I++M G + Y + C R++ A+ +F
Sbjct: 390 EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY 449
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
M P++ TY L+T C R+D A L E ++
Sbjct: 450 SMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 35/306 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ + + GR F M YG D S V++ LC A++L+K+ +
Sbjct: 327 INTICKQGRVDDAFQFLNNMG-SYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CV-------- 278
P +++ + I C G +++A L +M G E+ V YN +++ CV
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445
Query: 279 -------------------SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ LC + RLD+ AE +L +M NV TFNVL+S
Sbjct: 446 ELFYSMPCKPNTITYTTLLTGLCNAE---RLDAAAE-LLAEMLQKDCAPNVVTFNVLVSF 501
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C+ ++AI+L +M E GC PN T+ L+ + E E++ + S G +
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPD 561
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + L +R+E+A+ +F ++ G P + Y+ ++ C D A F
Sbjct: 562 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621
Query: 440 EAVRNG 445
V NG
Sbjct: 622 YMVSNG 627
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 120/309 (38%), Gaps = 45/309 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L R GR + ER G D + +V C G A +L+ +
Sbjct: 85 IRNLCRRGRTSDAARVLRAAERS-GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--V 141
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD +I+G C G++ EA L +M G + V Y +L+ V K F
Sbjct: 142 APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK----STGF- 196
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK--------------------------- 322
+A +VL +M G N+ T+NV+I+ +C+
Sbjct: 197 --GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 254
Query: 323 --------IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
+R ED +LF M E C PNE TF +L++ + V +++++M
Sbjct: 255 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 314
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G A + +C R++ A M + G +PD+ +Y ++ C R + A
Sbjct: 315 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 374
Query: 435 NALFDEAVR 443
L E VR
Sbjct: 375 KELLKEMVR 383
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 31/243 (12%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD---- 286
PD +C LI+ C G+ +A R+ R R G + AYN + V+ CR
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTL---VAGYCRYGQLDAA 132
Query: 287 -------PFRLDS-----------------EAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
P D+ EA +L DM + G +V T+ VL+ +CK
Sbjct: 133 RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
A+++ M GC PN T+ V+I + + RV + E ++R+ S G+
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y L LC +R E +F +M P+ T+D+L+ +C V++A + ++
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 443 RNG 445
+G
Sbjct: 313 GHG 315
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 10/205 (4%)
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ LCR+ S+A +VL E +G +V +N L++ C+ + + A +L M
Sbjct: 85 IRNLCRRGRT----SDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP 140
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
P+ T+ +I+ L RVGE ++D M G Y L +C
Sbjct: 141 ---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG 197
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
QAM V ++M+ G P+ TY++++ C RVD A + G + Y
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT-- 255
Query: 458 RYLKKPIAVKKGKKRETLPEKMARK 482
LK A K+ + E L +M K
Sbjct: 256 -VLKGLCAAKRWEDVEELFAEMMEK 279
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 155/380 (40%), Gaps = 32/380 (8%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFG-----RRKDFKAIHD 152
+L +N + GR F +L ++ + +T+S+ T G R +D K +
Sbjct: 321 TLCNIVINTICKQGRVDDAF-QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+V T + I L + G Q E+M ++G + + + +V C
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS-EHGCEVNIVTYNALVNGFCVQ 438
Query: 213 GYASYAEKLVKDTANEIF------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
G D+A E+F P+ L+ G C +LD A L EM +
Sbjct: 439 GRV--------DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 490
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V +N + VS C+K L EA +++ M +G N+ T+N L+ + S
Sbjct: 491 NVVTFNVL---VSFFCQKG----LMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNS 543
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+A++L + + G P+ T+ +I L + RV E +M ++ G Y +
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L LC + A+ F M ++G P+ TY L+ + + + L E GV
Sbjct: 604 LLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
Query: 447 EVKP--KEYRVDPRYLKKPI 464
K +E+R P++ K +
Sbjct: 664 LNKNLLEEWR--PKFSNKTV 681
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 196/471 (41%), Gaps = 47/471 (9%)
Query: 17 PPHRFISPQSTYFSRFS--PTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLEN 74
PP + SRF TH+L+ L P N DD D+ A + + +
Sbjct: 33 PPETPNHKNNITLSRFHFLGTHFLHSLGAPDKFPNRFN----DDKDKQSALDVHNIIKHH 88
Query: 75 LEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETL 134
+ P I + L + T LV +N + + + + + + +
Sbjct: 89 RGSSPEKIKRILDK--CGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLY 146
Query: 135 SFFTDYFGRRKDFKAIH---DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMER 191
+ D G+ + F+ H D + + KT ++R A + + +G FER +
Sbjct: 147 NEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER-RK 205
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDE 251
++G D + ++ LC + +AE L E D K ++++ GWCV G + E
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVS---KLCRKKDPFR-----------------LD 291
AKR +++ V+Y +++ ++ KL + + +R +D
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVID 325
Query: 292 S--------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG--C 341
+ EA +V ++ G NV T+N L+ +LCKIRR+E +L M G C
Sbjct: 326 ALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSC 385
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAM 400
PN+ TF L+K + R + D +++RM + D Y + RL ++ E+
Sbjct: 386 SPNDVTFSYLLK---YSQRSKDVDIVLERMAKNKCEM-TSDLYNLMFRLYVQWDKEEKVR 441
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
++ +M+ G PD TY + + ++ +A + F E + G+ +P+
Sbjct: 442 EIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPR 492
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 11/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + I+ LV+AG Q + + G D + +V+ L +N A L+ K
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTN-GCTIDIHTYTTIVDWLAKNKKIQEAVALMEK 59
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
TAN P + L+ G C G+L+EA L R++ G V Y ++D L +
Sbjct: 60 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID---GLGK 116
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
KK F EA K+ +M G+ + + LI L + + A ++ M GC P
Sbjct: 117 KKRSF----EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 172
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T +I L +A R+G + M++ G A + Y + LC +++ A+ +
Sbjct: 173 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 232
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+MK PD+ TY++L+ C V A A FDE + G KP Y
Sbjct: 233 AQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG--CKPDVY 280
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 148/342 (43%), Gaps = 14/342 (4%)
Query: 133 TLSFFTDYFGRRK-DFKAIHDF--LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + D G++K F+A F + L + I L++AG+ Q ++ M
Sbjct: 106 TYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTM 165
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGK 248
G D +L +++ LC+ G A ++ K A + P++ + LI G C K
Sbjct: 166 TSQ-GCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 224
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+D A + +M + T+ YN ++D LC+ D + A +M G
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILID---GLCKSGDV----AAARAFFDEMLEAGCKP 277
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+N+LIS CK ++ A +F M C PN T+ LI L + ++ +
Sbjct: 278 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYY 337
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
MK G Y + LC ++E +F++M+ G +S+T L+ C
Sbjct: 338 QHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKA 396
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
NRVD+A +LF+ + G+ P Y L K V +G+
Sbjct: 397 NRVDEAVSLFNAIRKEGMP-HPYAYNSIISALIKSGKVNEGQ 437
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 9/294 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VDN T S ID L + R + F+ M G D ++ L + G
Sbjct: 95 IVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMA-SRGLALDTVCYTALIRGLLQAG 153
Query: 214 YASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A + K T+ PD +I G C G++ A R+ + M G V Y+
Sbjct: 154 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 213
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+ + LC+ + ++D E +L M+ + T+N+LI LCK A
Sbjct: 214 AL---IHGLCKAR---KMDCALE-MLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAF 266
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M E GC P+ T+ +LI +A + D M S+ + Y ++ LC
Sbjct: 267 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCK 326
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ +A ++ MK G PDS Y L+ C +++ LFDE R+GV
Sbjct: 327 RRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 380
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 11/277 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVK 223
TL++ ID L +AGR + F+ ME G ++ ++ LC+ A E L +
Sbjct: 176 TLSTMIDGLCKAGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD ++LI G C G + A+ EM G + YN + +S C+
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNIL---ISGFCK 291
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A V DM + NV T+ LIS LCK R+ A + M E GC P
Sbjct: 292 AGNT----DAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPP 347
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + L+ L ++ ++ G + D M+ +G A + + LC R+++A+S+F
Sbjct: 348 DSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLF 406
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
++ +G P Y+ +++ +V++ A++ E
Sbjct: 407 NAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQE 442
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 161/391 (41%), Gaps = 22/391 (5%)
Query: 83 SQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSF-----F 137
S HL S T PSL Q+ F I G + + H + SF F
Sbjct: 34 SNHHHLNTSTCTKKPSLPQNNGGFVSNNSNDI-GIDDAMASFYRMIHMNPRPSFVELGKF 92
Query: 138 TDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDY 193
++K + + L + ++ G TL I+ L R + +M +
Sbjct: 93 LGSIAKKKQYSTVVS-LCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFK-L 150
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G + D + ++ LC G A +L + A + P+ +L+ C G + EA
Sbjct: 151 GIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEA 210
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD-SEAEKVLLDMEYNGVPRNVE 311
+ + M G E YN +++ C RL+ ++A KV M G +V
Sbjct: 211 RCVFETMTEKGVEPNIYTYNALMN---GYC-----LRLEMNDASKVFEIMVGKGCAPSVH 262
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
++++LI+ CK RR ++A L +M E PN T+ L++ L A+ + E E+ +M
Sbjct: 263 SYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKM 322
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
S+G + Y L LC +E+A+ + M+ PD Y++L+ ++
Sbjct: 323 CSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKL 382
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+ A LF + NG+ + Y + + L K
Sbjct: 383 EVAKELFSKLFANGIRPSVRTYNIMIKGLLK 413
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 46/315 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERME-RDYGFKRDKDSLRLVVEKLCENGYAS------- 216
T + I+ L GR + + F M RD + + ++V+ LC+ G S
Sbjct: 158 TFTTLINGLCNEGRIKEAVELFNEMAGRDA--MPNTVTFTILVDVLCKKGMVSEARCVFE 215
Query: 217 --------------------YAEKLVKDTANEIF---------PDDKICDLLIKGWCVDG 247
Y +L + A+++F P +LI G+C
Sbjct: 216 TMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSR 275
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
++DEAK L +M TV YN ++ LC EA+++ M +G+
Sbjct: 276 RIDEAKALLTQMSEKELIPNTVTYNTLMQ---GLCHASSLL----EAQELFKKMCSSGML 328
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N+ T+++L+ LCK E+A+KL M E P+ + +LI+ ++ A ++ E+
Sbjct: 329 PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKEL 388
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
++ + G + Y + L ++A +F KM+ DG PDS +Y++++ +
Sbjct: 389 FSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQ 448
Query: 428 HNRVDKANALFDEAV 442
+ A L DE V
Sbjct: 449 NQDPSTAIQLIDEMV 463
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 204 LVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++++ LC++G+ A KL+ ++ PD + ++LI+G + GKL+ AK L +++
Sbjct: 336 ILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFAN 395
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G YN ++ + K L EA K+ ME +G + ++NV+I +
Sbjct: 396 GIRPSVRTYNIMIKGLLKE-------GLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQ 448
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+ AI+L M + +TF +L+
Sbjct: 449 NQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 133/310 (42%), Gaps = 15/310 (4%)
Query: 141 FGRRKD-FKAIHDFLVDN--KEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
GR D + + D L +N +V+ TL I R G + F+ + Y F
Sbjct: 352 LGRMSDAMQQLSDMLANNLLPDVVSYNTL---IYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+ +++ LC G A++L + NE I PD +L+ G C G L A+
Sbjct: 409 IV-TYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM G EL + AY + KL F L E M G P ++ +NV+
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE-------MLAKGFPPDLIIYNVV 520
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ LCK+ E+A +L +M G P+ T+ +I + + R+ +G E+ M S G
Sbjct: 521 VDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL 580
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + G R+E+A F +M+ G P+ TY+ L+ C R+D+A
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640
Query: 437 LFDEAVRNGV 446
F E V G+
Sbjct: 641 FFAEMVEKGI 650
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 8/267 (2%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD 246
R ++G K + +++ C+ G L+ + P+D ++LI G
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+ ++AK L EM + G ++ YN ++ + L E M G
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEE-------MVLKGA 335
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
V T+N I LCK+ R DA++ M P+ ++ LI + + +
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ D ++S Y L LC +E A + +M +G PD TY +L+ C
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC 455
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEY 453
+ A FDE + G+E+ Y
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAY 482
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 43/232 (18%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF D +VV+ LC+ G A +L+ K ++ + PD +I +G+L +
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ + EM G V Y ++ + R + F SE M+ G+ NV T
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE-------MQEKGILPNVIT 621
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI+ LCK+RR + A F M E G PN+ ++ +LI
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN------------------- 662
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
C + ++A+S++++M G PDS T+ L+ +
Sbjct: 663 ----------------ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQ 698
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 10/225 (4%)
Query: 216 SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
S +K++K + + PD K C+ +++ + +A + R M G + V YN +L
Sbjct: 185 SVFDKMIK---SRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLL 241
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
D K + + L SE M+ G N T+NVLI+ L K E A L
Sbjct: 242 DSYCKGGKVQQGLDLLSE-------MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M + G + T+ LI + + E + + M G + Y F+ LC + R
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ AM M + PD +Y+ L+ +C + KA LFDE
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 24/284 (8%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL 238
P L F E GF+R + ++E L +N A +++ N +I D+
Sbjct: 95 PRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM--HRIVDV 152
Query: 239 LIKGWCVDGKLD----------EAKRLAREMYRGGFE------LGTVAYNCILDCVSKLC 282
LI G CV ++ +K+ E F+ L NC + + ++
Sbjct: 153 LIGG-CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNC--NRILRIL 209
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R KD L S+A +V M G+ + T+N L+ + CK + + + L M GC
Sbjct: 210 RDKD---LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCA 266
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN+ T+ VLI L + + +I M G + Y + + +A+S+
Sbjct: 267 PNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSL 326
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E+M G +P TY+ + C R+ A + + N +
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNL 370
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 9/187 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L + G + ++M D G D + ++ ENG ++ + ++
Sbjct: 521 VDGLCKLGNLEEASELLQKMVSD-GVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P +LI G G+L+ A EM G + YN +++ LC+ +
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLIN---GLCKVR--- 633
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+D +A +M G+ N ++ +LI+ C + ++A+ L+ +M + G P+ T
Sbjct: 634 RMD-QAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTH 692
Query: 349 LVLIKSL 355
L+K L
Sbjct: 693 SALLKQL 699
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 132/309 (42%), Gaps = 38/309 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANE 228
I+ L RAGR + + M R GF D+ + R +V LC +G A +L V
Sbjct: 156 INGLCRAGRFDSAVEIWRNMVRK-GFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGR 214
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--C--------- 277
I I + LI G+C G +D+A+ + M R G E V YN +L+ C
Sbjct: 215 IKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAE 274
Query: 278 ---------------------VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ LC+ RLD ++ ME G+ +V ++N +
Sbjct: 275 NLMKKMERSGVEPDVYSYNELLKGLCKAN---RLDKAYMMMVNKMEAKGLC-DVVSYNTI 330
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I LC ++ A KLF MG G P+ TF +LIK+ + +++D+M G
Sbjct: 331 IKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGL 390
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + LC ++ A SVF M G PD +Y+ L+ C +RV +A
Sbjct: 391 LPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMH 450
Query: 437 LFDEAVRNG 445
L+++ G
Sbjct: 451 LYEDMHTGG 459
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 16/327 (4%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLG--PKTLASCI--DRLVRAGRPTQ 181
FS T S F + K+F I L D + LG P A I + L +
Sbjct: 74 GFSLNSFTYSRFISGLCKVKNFVLIEKLLED-MDRLGYVPDIWAYNIYLNLLCCENQLDV 132
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLI 240
LG + M + G + D + +V+ LC G A ++ ++ + F PD+K C L+
Sbjct: 133 ALGVVQTMV-EKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALV 191
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G C DGK+D A L RG + YN + ++ C+ +A+ ++
Sbjct: 192 LGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSL---INGFCQAG----WIDKAQSIISF 244
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M NG ++ T+NVL++ C E+A L +M G P+ ++ L+K L +A R
Sbjct: 245 MRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANR 304
Query: 361 VGEG-DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+ + M+++M++ G Y + LC ++A +FE+M G PD T+
Sbjct: 305 LDKAYMMMVNKMEAKGLC-DVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFT 363
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
+L+ + + A L D+ G+
Sbjct: 364 ILIKAFLREGSSNIAKKLLDQMTGLGL 390
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D S +++ LC + A KL ++ + I PD +LIK + +G + AK+L
Sbjct: 323 DVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLL 382
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+M G V Y I+D LC+ A V DM +G+ +V ++N L
Sbjct: 383 DQMTGLGLLPDRVLYTTIVD---HLCKTGKM----GMAHSVFCDMVESGITPDVVSYNAL 435
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LC+ R +A+ L+ M G P+E TF ++I L ++ + D+M G+
Sbjct: 436 INGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGF 495
Query: 377 AI 378
+
Sbjct: 496 TL 497
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 7/212 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
+ D A++ M GF L + Y+ +S LC+ K+ + EK+L DM+ G
Sbjct: 59 RFDLAEQYYDRMIPQGFSLNSFTYSRF---ISGLCKVKNFVLI----EKLLEDMDRLGYV 111
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ +N+ ++ LC + + A+ + M E G P+ T+ ++I L +A R E+
Sbjct: 112 PDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEI 171
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
M G++ +K + LC +++ A + Y+ L+ +C
Sbjct: 172 WRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQ 231
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
+DKA ++ RNG E Y V Y
Sbjct: 232 AGWIDKAQSIISFMRRNGCEPDLVTYNVLLNY 263
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 7/209 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
I G C ++L +M R G+ AYN L+ LC + +LD A V+
Sbjct: 85 FISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLN---LLCCEN---QLDV-ALGVV 137
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G ++ T+ ++I+ LC+ R + A++++ M G P+E L+ L
Sbjct: 138 QTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHD 197
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+V E+ K Y + C I++A S+ M+ +G PD TY
Sbjct: 198 GKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTY 257
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++L+ C +++A L + R+GVE
Sbjct: 258 NVLLNYCCDELLLEEAENLMKKMERSGVE 286
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 9/266 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I LVR R +++RM GF + + + LC+ EKL++D
Sbjct: 51 IGVLVRQSRFDLAEQYYDRMIPQ-GFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLG 109
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++ + C + +LD A + + M G E V Y + ++ LCR
Sbjct: 110 YVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIV---INGLCRAG--- 163
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R DS E + +M G + + L+ LC + + A +L +++ +
Sbjct: 164 RFDSAVE-IWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIY 222
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI QA + + +I M+ G Y L C +E+A ++ +KM+
Sbjct: 223 NSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMER 282
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKA 434
G PD +Y+ L+ C NR+DKA
Sbjct: 283 SGVEPDVYSYNELLKGLCKANRLDKA 308
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%)
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
Y + R+ + IS+ K + A+K F M + C + I L + +R
Sbjct: 2 YRSLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFD 61
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ DRM G+++ Y F++ LC ++ + E M G+ PD Y++ +
Sbjct: 62 LAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYL 121
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C N++D A + V G E Y +
Sbjct: 122 NLLCCENQLDVALGVVQTMVEKGREPDIVTYTI 154
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 59/142 (41%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N I L + R + A + + RM G N T+ I L + +++++ M
Sbjct: 47 YNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMD 106
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
GY Y +L LC +++ A+ V + M G PD TY +++ C R D
Sbjct: 107 RLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFD 166
Query: 433 KANALFDEAVRNGVEVKPKEYR 454
A ++ VR G K R
Sbjct: 167 SAVEIWRNMVRKGFSPDEKACR 188
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKV 297
+ +C +GK+ EAK + M + GF+ V Y+ ++D C+ K K A+ +
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNK---------AKSI 276
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M GV +++++N+LI+ CKI+ ++ A+ LF M PN T+ LI L +
Sbjct: 277 FNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCK 336
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ ++ +++D M G Y L LC ++A+++ K+K G P+ T
Sbjct: 337 SGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYT 396
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y +L+ C R + A +F++ + G + Y V
Sbjct: 397 YTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTV 434
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
+ + G+ + F M + GFK + + +++ C + A+ + + A
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKK-GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGG 284
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + ++LI G+C D A L EM+ V YN ++D LC+
Sbjct: 285 VNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLID---GLCKSGK-- 339
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
S A K++ +M G P ++ T++ L+ LCK + AI L ++ + G PN T+
Sbjct: 340 --ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTY 397
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + R + + + + GY I Y + C +A+++ KM+
Sbjct: 398 TILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEE 457
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+G P++ TY++++ + DKA L E + G+
Sbjct: 458 NGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGL 495
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 8/256 (3%)
Query: 206 VEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
V C+ G A+ + + F P+ L+ G+C+ ++++AK + M +GG
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+YN +++ K+ ++ A + +M + NV T+N LI LCK
Sbjct: 286 NPDIQSYNILINGFCKI-------KMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSG 338
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ A+KL M + G P+ T+ L+ +L + + ++ ++K G Y
Sbjct: 339 KISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYT 398
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ LC R E A ++FE + G+N + TY +++ +C + +A A+ + N
Sbjct: 399 ILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEEN 458
Query: 445 GVEVKPKEYRVDPRYL 460
G Y + R L
Sbjct: 459 GCIPNAVTYEIIIRSL 474
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 205 VVEKLCENGYASYAEK-LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+V LC+ G A++ L++ + P++ I L+I+G C G +DEA L R M G
Sbjct: 234 LVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKG 293
Query: 264 FELGTVAYNCILDCVSKLCR--------------KKDPFRLDSEAEKVLLD--------- 300
T Y I + LCR +K + D A L+D
Sbjct: 294 LVPNTYTYTII---TAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 350
Query: 301 --------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
M G+P N+ T+NVLI LCK + E A ++ M GC PN TF +LI
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLI 410
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ + +G E++D M+ Y + LC + + A + EKM G
Sbjct: 411 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 470
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P+ Y +L+ + + R+++A L D +GV
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV 504
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 205 VVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC S A KL+ K T + + P+ + +LI + +G+++EA+RL M G
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
YN I+ C+SK + + EA LL+++ G+ + TF I K
Sbjct: 504 VAPDIFCYNAIISCLSKAGKME-------EASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A K F M + G PN + VLI ++A + E + R+ + G +
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
F+ L R+++A+ VF ++K G PD TY L++ +C V+KA L DE
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676
Query: 444 NGVEVKPKEYRVDPRYLKKPIAVKKGKKR-ETLPEK 478
G+ Y L K +++ +K + +PEK
Sbjct: 677 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 712
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 10/285 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ +AG + L F R+ G D + + L +NG A K+ + +
Sbjct: 585 INGHFKAGNLMEALSIFRRLHA-LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 643
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD LI G+C G++++A L EM G YN ++D LC+ D
Sbjct: 644 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVD---GLCKSGDIQ 700
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A K+ M G+ + T++ +I CK +A LF+ M G P+ +
Sbjct: 701 R----ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 756
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + + + M G+A + + C +I++A +F++M
Sbjct: 757 NALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIA 815
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
PD TY ++ C ++++AN LF E + V Y
Sbjct: 816 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 9/246 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+V+ LC++G A KL + + PD +I G+C + EA L EM G
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ + YN + V C++ D +A + +M G + +FN LI CK
Sbjct: 749 VQPHSFVYNAL---VHGCCKEGDM----EKAMNLFREMLQKGFATTL-SFNTLIDGYCKS 800
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ ++A +LF M P+ T+ +I +A ++ E + + M+ + Y
Sbjct: 801 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ + + + ++FEKM G PD TY L++ C + + +A L DE V
Sbjct: 861 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 920
Query: 444 NGVEVK 449
G+ K
Sbjct: 921 KGMLTK 926
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 125/275 (45%), Gaps = 9/275 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L RA R + FE M++ G K D ++ +++ G ++ + P
Sbjct: 308 LCRAKRMNEAKLTFEEMQKT-GLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 366
Query: 233 DKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ I ++LI G C GK+++A + + M G + + + C+L + CR+ + R
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF-CLL--IEGYCREHNMGR-- 421
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A ++L +ME + + ++ +I+ LC + A KL +M G PN + +L
Sbjct: 422 --ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSIL 479
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + R+ E ++D M +G A Y ++ L ++E+A + +++ G
Sbjct: 480 IMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 539
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD+ T+ + + ++ +A FDE + +G+
Sbjct: 540 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 574
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 11/219 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD I G+ GK+ EA + EM G Y +++ F+
Sbjct: 541 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN---------GHFKA 591
Query: 291 DS--EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA + + GV +V+T + I L K R ++A+K+F + E G P+ T+
Sbjct: 592 GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + V + E+ D M G A Y + LC I++A +F+ M
Sbjct: 652 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G PDS TY ++ +C V +A +LF E GV+
Sbjct: 712 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 750
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 9/279 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I L +AG+ + + ++ G K D + + + G + A K + +
Sbjct: 513 AIISCLSKAGKMEEASTYLLEIQ-GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 571
Query: 228 E-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ P++ + +LI G G L EA + R ++ G + + + K R +
Sbjct: 572 HGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQ- 630
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
EA KV +++ G+ +V T++ LIS CK E A +L M G PN
Sbjct: 631 ------EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 684
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ L+ L ++ + ++ D M G Y + C E + +A S+F +M
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G P S Y+ L+ C ++KA LF E ++ G
Sbjct: 745 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 10/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L ++G + F+ M + G + D + +++ C++ + A L + ++
Sbjct: 690 VDGLCKSGDIQRARKLFDGMP-EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + + L+ G C +G +++A L REM + GF T+++N ++D K C+ +
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQ--- 804
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA ++ +M + + T+ +I CK + E+A LF M E + T+
Sbjct: 805 ----EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + E + ++M + G + Y + C + + +A + +++
Sbjct: 861 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 920
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G +DLL+T C + +A+ L DE G++
Sbjct: 921 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 959
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 115/299 (38%), Gaps = 25/299 (8%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-------NGYAS------YAEKL 221
+ G P ++L FF + G + DS ++ +LC NG + Y+
Sbjct: 82 QVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSS 141
Query: 222 VKDTA-----NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
+ D+ N + D+LI + G LDEA + + + N +L
Sbjct: 142 ILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLK 201
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ K C + F KV M + +V T+ L+ LCK A ++ M
Sbjct: 202 DLLK-CGMMELFW------KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEM 254
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
E G +PNE + ++I+ + Q + E E+ M G Y LC +R+
Sbjct: 255 DEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRM 314
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+A FE+M+ G PD L+ + +D+ + D V G+ + Y V
Sbjct: 315 NEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 8/218 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
S +++ C++ A +L ++ A +I PD +I C GK++EA L +EM
Sbjct: 789 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 848
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ TV Y ++ +KL + + F L + M GV + T+ ++I
Sbjct: 849 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK-------MVAKGVKPDEVTYGLVIYA 901
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
CK +A KL + G T +LI +L + + E +++D M G
Sbjct: 902 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 961
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ ++++A VFE +K+ G PD+ T
Sbjct: 962 LAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 131/302 (43%), Gaps = 49/302 (16%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI 235
A R Q + FF+ M+ G + D +S +++ L ++G + A L +A PD
Sbjct: 154 ANRLEQAMEFFKEMKAS-GVEPDLESYHILLSALSDSGRMAEAHALF--SAMTCSPDIMT 210
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
++L+ G+C G+ EA+ L +E+ + G+E Y+ I++C KL + + EA
Sbjct: 211 YNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVE-------EAW 263
Query: 296 KVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+V + M E N VP N TFN LI+ CK EDAIKLF M + GC T+ LI S
Sbjct: 264 EVFMKMIESNCVP-NAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDS 322
Query: 355 LYQ------------------------------------AARVGEGDEMIDRMKSAGYAI 378
L + A R+ E + D M+ A
Sbjct: 323 LCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAP 381
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC + R+++A E MK G+ P TY L+ +C + A F
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFF 441
Query: 439 DE 440
++
Sbjct: 442 EK 443
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E +K + P+ + LI G+C G L++A +L EM + G + V YN ++D
Sbjct: 264 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID-- 321
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC+K+ A + +E G+ + T+N LI C RR +A++ F M E
Sbjct: 322 -SLCKKRGGVY---TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-E 376
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
C PN T+ +LI L + R+ E + ++ MK+ GY Y + C ++
Sbjct: 377 GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKS 436
Query: 399 AMSVFEKMK-----------------------------------TDGHNPDSETYDLLMT 423
A+ FEKMK +G PD TY+ L++
Sbjct: 437 ALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLIS 496
Query: 424 KWCAHNRVDKANALFD 439
C+ NRV+ A LFD
Sbjct: 497 GLCSANRVEDAQRLFD 512
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 14/288 (4%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-- 211
++++ V T + I +AG + F ME+ G K + +++ LC+
Sbjct: 269 MIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK-IGCKATIVTYNTLIDSLCKKR 327
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G + + K + P + LI+G+C +L EA + EM G + Y
Sbjct: 328 GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITY 386
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+ ++D + K+ R K EA K L DM+ +G V T+ LI+ CK + A+
Sbjct: 387 SILIDGLCKVRRMK-------EAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALL 439
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
F +M GC PN F LI L +A R +G ++ M + G Y ++ LC
Sbjct: 440 FFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLC 499
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
R+E A +F+ M P+ T++ L+ CA +V++A + D
Sbjct: 500 SANRVEDAQRLFDGMACA---PNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 10/286 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I + G+ Q + F M + G + ++ ++ LCE G S A KL ++ A
Sbjct: 39 IRGFCKGGQMHQAVSVFSDM-KSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGP 97
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC-RKKDP 287
P ++L++G+ + G++ +A ++M + + T YN +L LC K
Sbjct: 98 FLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLK---GLCWENKSA 154
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RL+ +A + +M+ +GV ++E++++L+S L R +A LF M C P+ T
Sbjct: 155 NRLE-QAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMT 210
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ VL+ + + E ++ + AGY Y + C ++++E+A VF KM
Sbjct: 211 YNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P++ T++ L+ +C ++ A LF E + G + Y
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTY 316
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ L+ G K D+A RL +E+ G F YN + + C+ +A
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVL---IRGFCKGGQM----HQAVS 53
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
V DM+ +G+ N T N L+ LC+I + A+KLF M P + +L++ +
Sbjct: 54 VFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF 113
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC----GIERIEQAMSVFEKMKTDGHN 412
A RV + + M+ + ++ Y L LC R+EQAM F++MK G
Sbjct: 114 MAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE 173
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFD 439
PD E+Y +L++ R+ +A+ALF
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFS 200
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%)
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N L+S L R+ + A++LF + PN T+ VLI+ + ++ + + MKS
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
+G L LC I ++ A+ +F +M+ P S ++++L+ + RV
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 434 ANALFDEAVRNGVEVKPKEYRV 455
A A + ++ V Y +
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNL 142
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 30/298 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANE 228
I L GR + L + M G + + +++E +C++ G+ E L + A
Sbjct: 152 IRGLCDRGRVGEALSLLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 210
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +++I G C +G++D+A+ + GF+ TV+Y +L + R +D
Sbjct: 211 CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270
Query: 289 RLDSE----------------------------AEKVLLDMEYNGVPRNVETFNVLISNL 320
L +E A +VL M +G N N++I+ +
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R +DA + MG +GC P+ ++ ++K L +A R + E++ M +
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ F+ LC IEQA + E+M G + TY+ L+ +C RVD A LF
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 20/279 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-----ENGYASYAEKLVKD 224
I+ + R GR F R+ YGF+ D S V++ LC E+ +AE + K+
Sbjct: 222 INGMCREGRVDDAREFLNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
P++ D+L++ +C G ++ A ++ +M G T N +++ + K R
Sbjct: 281 C----MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D F+ L +M G + ++ ++ LC+ R EDA +L M C PN
Sbjct: 337 DDAFQF-------LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
E TF I L Q + + +I++M G + Y + C R++ A+ +F
Sbjct: 390 EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY 449
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
M P++ TY L+T C R+D A L E ++
Sbjct: 450 SMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 35/306 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ + + GR F M YG D S V++ LC A++L+K+ +
Sbjct: 327 INTICKQGRVDDAFQFLNNMG-SYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CV-------- 278
P +++ + I C G +++A L +M G E+ V YN +++ CV
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445
Query: 279 -------------------SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ LC + RLD+ AE +L +M NV TFNVL+S
Sbjct: 446 ELFYSMPCKPNTITYTTLLTGLCNAE---RLDAAAE-LLAEMLQKDCAPNVVTFNVLVSF 501
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C+ ++AI+L +M E GC PN T+ L+ + + E E++ + S G +
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPD 561
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + L +R+E+A+ +F ++ G P + Y+ ++ C D A F
Sbjct: 562 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621
Query: 440 EAVRNG 445
V NG
Sbjct: 622 YMVSNG 627
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 120/309 (38%), Gaps = 45/309 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L R GR + ER G D + +V C G A +L+ +
Sbjct: 85 IRNLCRRGRTSDAARVLRAAERS-GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--V 141
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD +I+G C G++ EA L +M G + V Y +L+ V K F
Sbjct: 142 APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK----STGF- 196
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK--------------------------- 322
+A +VL +M G N+ T+NV+I+ +C+
Sbjct: 197 --GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 254
Query: 323 --------IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
+R ED +LF M E C PNE TF +L++ + V +++++M
Sbjct: 255 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 314
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G A + +C R++ A M + G +PD+ +Y ++ C R + A
Sbjct: 315 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 374
Query: 435 NALFDEAVR 443
L E VR
Sbjct: 375 KELLKEMVR 383
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 31/243 (12%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD---- 286
PD +C LI+ C G+ +A R+ R R G + AYN + V+ CR
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTL---VAGYCRYGQLDAA 132
Query: 287 -------PFRLDS-----------------EAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
P D+ EA +L DM + G +V T+ VL+ +CK
Sbjct: 133 RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
A+++ M GC PN T+ V+I + + RV + E ++R+ S G+
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y L LC +R E +F +M P+ T+D+L+ +C V++A + ++
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 443 RNG 445
+G
Sbjct: 313 GHG 315
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 10/205 (4%)
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ LCR+ S+A +VL E +G +V +N L++ C+ + + A +L M
Sbjct: 85 IRNLCRRGRT----SDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP 140
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
P+ T+ +I+ L RVGE ++D M G Y L +C
Sbjct: 141 ---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG 197
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
QAM V ++M+ G P+ TY++++ C RVD A + G + Y
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT-- 255
Query: 458 RYLKKPIAVKKGKKRETLPEKMARK 482
LK A K+ + E L +M K
Sbjct: 256 -VLKGLCAAKRWEDVEELFAEMMEK 279
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 146/360 (40%), Gaps = 28/360 (7%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFG-----RRKDFKAIHD 152
+L +N + GR F +L ++ + +T+S+ T G R +D K +
Sbjct: 321 TLCNIVINTICKQGRVDDAF-QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+V T + I L + G Q E+M ++G + + + +V C
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS-EHGCEVNIVTYNALVNGFCVQ 438
Query: 213 GYASYAEKLVKDTANEIF------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
G D+A E+F P+ L+ G C +LD A L EM +
Sbjct: 439 GRV--------DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 490
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V +N + VS C+K L EA +++ M +G N+ T+N L+ + K S
Sbjct: 491 NVVTFNVL---VSFFCQKG----LMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 543
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+A++L + + G P+ T+ +I L + RV E +M ++ G Y +
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L LC + A+ F M ++G P+ TY L+ + + + L E GV
Sbjct: 604 LLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 22/296 (7%)
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEVLGP---KTLASCIDRLVRAGRPTQVLGFFERMERDY 193
D + F L + +E P + + + I R VRA P++ F RME
Sbjct: 151 MIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYG 210
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
D +L ++ L + AS A+ + + PD + L+ WC G+LDEA+
Sbjct: 211 AGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLDEAE 270
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
R+ EM + G Y ++D + + + A+++L M +G P N TF
Sbjct: 271 RVFAEMQQAGVTPNVYTYTAVIDAMYRAGQV-------PRAQELLCQMIDSGCPPNTATF 323
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD-------E 366
N ++ K RSE +++ +M + GC P+ T+ L+++ G+G +
Sbjct: 324 NAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMET-----HCGKGQSNLDAAMK 378
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
M+ RM + G + L + + + A ++E+M+ P+ TY+LLM
Sbjct: 379 MLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLM 434
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC-HPNETTFLVLI 352
A +L +M VP + + LI + +A LF RM E+G P+ T L+
Sbjct: 164 ARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLL 223
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+L + E M D KS + Y + C R+++A VF +M+ G
Sbjct: 224 GALSKKRLASEAQAMFDSYKSV-FTPDVVLYTTLVHAWCRSGRLDEAERVFAEMQQAGVT 282
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P+ TY ++ +V +A L + + +G
Sbjct: 283 PNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSG 315
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 126/290 (43%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + I+ + GR + L E M+ G K + + +V+ C G A L+ K
Sbjct: 148 TCTAVINAYCKEGRMSDALRVLELMKLR-GCKPNVWTYNALVQGFCNEGKVHKAMTLLNK 206
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + PD +LLI+G C+DG ++ A RL R M G YN + ++ LC+
Sbjct: 207 MRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNAL---INALCK 263
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R D +A + +E G+ N TFN LI+ LCK +++ A K +M GC P
Sbjct: 264 DG---RTD-QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTP 319
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ I+ L + EG I M +Y + +L +
Sbjct: 320 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTW 379
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+M + G NPD TY M +C R+++A + E +NGV V Y
Sbjct: 380 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 429
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF +D S ++E LCE G A +L + PD + L+KG C + +E
Sbjct: 40 GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ---PDMHMYAALVKGLCNAERGEEGL 96
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ R M G+ T AY ++D CR++ EAE++L +M G+ V T
Sbjct: 97 LMLRRMKELGWRPSTRAYAAVVD---FRCRERKA----KEAEEMLQEMFEKGLAPCVVTC 149
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+I+ CK R DA+++ M GC PN T+ L++ +V + ++++M++
Sbjct: 150 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 209
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + C IE A + M+ DG D TY+ L+ C R D+
Sbjct: 210 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 269
Query: 434 ANALFDEAVRNGVE 447
A +LFD G++
Sbjct: 270 ACSLFDSLETRGIK 283
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 11/225 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + LI G+C ++D A+ L +M GF V+Y +++ + + R + L
Sbjct: 8 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
E ++ + M + L+ LC R E+ + + RM E G P+ +
Sbjct: 68 FGEMDQPDMHM-----------YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++ + + E +EM+ M G A + C R+ A+ V E MK G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+ TY+ L+ +C +V KA L ++ GV Y +
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 221
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 119/290 (41%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A+ + L A R + L RM ++ G++ + VV+ C A AE+++++
Sbjct: 80 AALVKGLCNAERGEEGLLMLRRM-KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMF 138
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ + P C +I +C +G++ +A R+ M G + YN + V C +
Sbjct: 139 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL---VQGFCNEG 195
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ A +L M GV + T+N+LI C E A +L M G ++
Sbjct: 196 KVHK----AMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 251
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI +L + R + + D +++ G + + LC + + A EK
Sbjct: 252 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEK 311
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M + G PD+ TY + C + + E ++ V+ Y +
Sbjct: 312 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 361
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 122/327 (37%), Gaps = 47/327 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVK 223
T + I+ L + GR Q F+ +E G K + + ++ LC++G A A K L K
Sbjct: 253 TYNALINALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKFLEK 311
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL-------- 275
+ PD I+ C E EM + + TV Y ++
Sbjct: 312 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 371
Query: 276 ---------DCVSKLCRKKDPFRLDS-----------EAEKVLLDMEYNGVPRNVETFNV 315
+ VS C S EAE VL++M NGV + +N
Sbjct: 372 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 431
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL-----------------YQA 358
L+ I +++ A+ + +M PN+ T+ +L++ L ++A
Sbjct: 432 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 491
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + + D MK + Y L R E+A S+ MK D + + + Y
Sbjct: 492 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 551
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+T +C R A L +++G
Sbjct: 552 TALVTCFCKSKRYLDAWVLVCSMIQHG 578
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 11/279 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-----NGYASYAEKLVKDTAN 227
L + +QV +++M G D +L +++ LC G A+ A + +
Sbjct: 101 LAKIEHYSQVFSLYKQMHLA-GLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGY-- 157
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
PD LIKG CV+ ++ EA +L M + G V Y ++ + L
Sbjct: 158 --IPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIA 215
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ E +N P NV +++++I LCK+ E+AI LF M + G PN T
Sbjct: 216 LKWHQEMLNDTSPYVFNCRP-NVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVT 274
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F VLI L + +V + ++++ M G Y + C + + A +F M
Sbjct: 275 FSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMP 334
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ G+ PD +Y++L+ +C +V++A LF+E + G+
Sbjct: 335 SKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGM 373
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 137/306 (44%), Gaps = 30/306 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G + + F M D G + + + ++++ LC+ G A+KL++
Sbjct: 244 IDGLCKVGNWEEAICLFNEM-VDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIG 302
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ LIKG+C+ G L+ AK L M G+E ++YN +++ K + ++
Sbjct: 303 IVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAM 362
Query: 289 RLDSEAEKVLL--DMEYNGV--------------------------PRNVETFNVLISNL 320
+L +E V + D++ +GV P+++ + + L
Sbjct: 363 KLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGL 422
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK +A+KLF + + + TF LI L +A ++ E+ +++ G
Sbjct: 423 CKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDA 482
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++++A +F+KM+ +G +PD TY +LM + N+++K L
Sbjct: 483 MAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHR 542
Query: 441 AVRNGV 446
+ V
Sbjct: 543 MIEKDV 548
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 160/405 (39%), Gaps = 35/405 (8%)
Query: 43 KPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHL-IFSHVTPTPSL-V 100
K SS T +P + Q+ S ++L A P IS + + +F H T S+ V
Sbjct: 22 KLLSSLFTHSPAVLSSNPQIS----SANNPKSLHASPERISFQHGIPMFLHKCKTGSISV 77
Query: 101 QSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV 160
F R+I FN L A H + S + ++ + L+
Sbjct: 78 TQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLY-----KQMHLAGLWPDLL----- 127
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
TL I+ L R + L + R G+ D + +++ LC A K
Sbjct: 128 ----TLNILINCLCNVNRINEGLAAMAGIMRR-GYIPDVVTFTTLIKGLCVEHRIIEATK 182
Query: 221 L-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM------YRGGFELGTVAYNC 273
L ++ P+ LIKG C G ++ A + +EM Y ++Y+
Sbjct: 183 LFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSI 242
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
I+D + K+ ++ L +E M GV NV TF+VLI LCK + A KL
Sbjct: 243 IIDGLCKVGNWEEAICLFNE-------MVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLL 295
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
M + G PN T+ LIK + E+ M S GY Y + C
Sbjct: 296 EMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKT 355
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
++E+AM +F +M G PD +T +L+ +VD A LF
Sbjct: 356 LKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF 400
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 137/297 (46%), Gaps = 17/297 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD-----YGFKRDKDSLRLVVEKLCENGYASYAE 219
T + I L G L + + M D + + + S ++++ LC+ G A
Sbjct: 198 TYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAI 257
Query: 220 KLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
L + ++ + P+ +LI C +G++ +AK+L M + G Y + +
Sbjct: 258 CLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSL---I 314
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
C D L+S A+++ + M G +V ++N+LI+ CK + E+A+KLF M
Sbjct: 315 KGFCLVGD---LNS-AKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLH 370
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY--EFLTRLCGIERI 396
G P+ T VL+K+L+ A +V + E+ +K YA+ K FL LC I
Sbjct: 371 VGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKP--YAMPKDLCICCIFLDGLCKNGYI 428
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+AM +F ++++ D ET+ L+ C +++ A LF++ G++ Y
Sbjct: 429 FEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAY 485
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 6/177 (3%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ ++ T N+LI+ LC + R + + + G P+ TF LIK L R
Sbjct: 117 MHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHR 176
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH------NPD 414
+ E ++ RM+ G Y + LC + I A+ ++M D P+
Sbjct: 177 IIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPN 236
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+Y +++ C ++A LF+E V GV+ + V L K V K KK
Sbjct: 237 VISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKK 293
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
KT + L AG+ F R+ + Y +D + ++ LC+NGY A KL
Sbjct: 378 KTSGVLLKALFLAGKVDDAKELF-RVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFN 436
Query: 224 DTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + + D + LI G C GKL+ A L ++Y G + +AY+ + + C
Sbjct: 437 ELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSM---IHGFC 493
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+K +A + ME NG ++ T+++L+ + + E ++L +RM E
Sbjct: 494 KKGQV----DKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVW 549
Query: 343 PNETTFLVL 351
P++ + ++
Sbjct: 550 PDDGIYAIV 558
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 144/354 (40%), Gaps = 20/354 (5%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV-----RAGRPT 180
FSH ++L + + F + L D L P L+ + L+ RA P
Sbjct: 117 GFSHHPDSLLVLANSLAGARLFPLLRSLLSD----LPPSALSRGLFPLLFRAYSRARLPE 172
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLI 240
+ F M +GF ++ L NG Y E+ +++ + K +LI
Sbjct: 173 DAIRAFSSMA-GFGFPPTIADFHSLLFALSRNGLVEYGERFFRESTAQFDVSAKAYTILI 231
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
GW V K + A+ L EM + G EL YN ++D LCR D + S E++
Sbjct: 232 SGWAVVKKPENARSLFDEMVKRGVELDVHVYNALIDA---LCRGGD---ITSAQEQLSNM 285
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+ +G+ N T+ + C + A+++ RM PN T+ +I+ L
Sbjct: 286 QKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGE 345
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E ++D + + G Y L C ++ + +A+ + +M + PD +Y++
Sbjct: 346 INEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNM 405
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
L+ + R D A ++D + G Y V + +A KKG+ +
Sbjct: 406 LLKMLISVGRFDTAIEVWDGMEKRGFHPGAATYAV----MIHGLASKKGRAEDA 455
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 166/377 (44%), Gaps = 28/377 (7%)
Query: 55 TIDDPDQVIARSLSGELLENLEADPLPISQRLHL-IFSHVTPTPSLVQSTLNFSPEAGRA 113
+I Q S+S L L+ LP +Q L L I S+ +P +L
Sbjct: 28 SIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL-------- 79
Query: 114 ILGFNHWLTQNANFSHTDETL--SFFTDYFGRRKDFKAIHDF--LVDNKEVLGPKTLASC 169
H LTQN N S T L S + + KA+ F +VD V P S
Sbjct: 80 -----HHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSL 134
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
+ LVR+ + FF ++ F D S ++++ CENG + +L+ +
Sbjct: 135 LGSLVRSNCFEKAWLFFNELKERVKF--DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMG 192
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ I LI G C +G ++ A+ +M G + +++ + K KKD F
Sbjct: 193 LSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGF 252
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L + M+ NG+ N+ T+N L++ C + A LF M E G N T+
Sbjct: 253 DLFEK-------MKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTY 305
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + RV E ++++D+MK A + Y + C + +++A S+ +++K+
Sbjct: 306 NTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKS 365
Query: 409 DGHNPDSETYDLLMTKW 425
+G +P TY++L+ +
Sbjct: 366 NGLSPSLVTYNILIEGY 382
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 9/273 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDT 225
+ ID + G + FF++M + G ++ + +++ L + G L K
Sbjct: 201 TTLIDGCCKNGDIERARLFFDKM-GEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMK 259
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N +FP+ + L+ +C +GK+ A L EM G E V YN + + +CR++
Sbjct: 260 INGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTL---IGGMCREE 316
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ EAEK++ M+ V N+ T+N LI C + + A L ++ G P+
Sbjct: 317 RVW----EAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSL 372
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ +LI+ +A ++ M+ G + K + ++ +E+A ++
Sbjct: 373 VTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSS 432
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
M+ G PD Y +L+ C + +++ LF
Sbjct: 433 MEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLF 465
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ NV + LI CK E A F +MGE G N+ TF VLI L++ +G
Sbjct: 192 GLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDG 251
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ ++MK G Y + CG +I +A +F++M+ G + TY+ L+
Sbjct: 252 FDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGG 311
Query: 425 WCAHNRVDKANALFDEAVRNGV 446
C RV +A L D+ + V
Sbjct: 312 MCREERVWEAEKLVDQMKKAAV 333
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 30/274 (10%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKI 235
G+ + F+ M R+ G + + + ++ +C AEKLV + P+
Sbjct: 281 GKICRAFDLFDEM-RERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLIT 339
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ LI G+C G LD+A L ++ G V YN +++ SK K L E E
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399
Query: 296 -----------KVLLD-----------------MEYNGVPRNVETFNVLISNLCKIRRSE 327
VL+D ME G+ +V + VLI LC +
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
++ KLF MGE P++ + +I + ++ M++ G Y +
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSII 519
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
LC + E+A + +KM P + +++
Sbjct: 520 GVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 135/298 (45%), Gaps = 8/298 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D +V++ T + +D + + G L +ME K +
Sbjct: 191 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVI 250
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ L ++G + A+ L + + I P+ + +I G+C G+ EA+RL REM+
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V ++ + ++ L ++ F EAE++ +M G+ N T+N +I
Sbjct: 311 ERKMSPDVVTFSVL---INALVKEGKFF----EAEELYNEMLPRGIIPNTITYNSMIDGF 363
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K R + A ++FY M GC P+ TF +LI A RV +G +++ M G
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C + + A+ + ++M + G P+ T + L+ C + ++ A +F
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF 481
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 20/292 (6%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
++ ID L + GR T F M+ + G + + ++ C +G S A++L+++
Sbjct: 252 SAIIDGLWKDGRQTDAQNLFSEMQ-EKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
++ PD +LI +GK EA+ L EM G T+ YN ++D SK
Sbjct: 311 ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK----- 365
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
RLD+ AE++ M G +V TF++LI C +R +D +KL + M G N
Sbjct: 366 -QNRLDA-AERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE- 404
T+ LI Q + +++ M S+G L LC +++ A+ +F+
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV 483
Query: 405 ----KMKTDGHN------PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
KM D + PD +TY++L+ + +A L++E G+
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGL 535
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 139/303 (45%), Gaps = 16/303 (5%)
Query: 148 KAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
+A+H F ++ P +A + ++ L R GR + + +RM D G + ++ + +
Sbjct: 164 EALHFF----HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQITYGTI 218
Query: 206 VEKLCENGYASYAEKLVK--DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
V+ +C+ G A L++ + + I P+ I +I G DG+ +A+ L EM G
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG 278
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
YNC+++ R SEA+++L +M + +V TF+VLI+ L K
Sbjct: 279 ISPNLFTYNCMINGFCSSGRW-------SEAQRLLREMFERKMSPDVVTFSVLINALVKE 331
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A +L+ M G PN T+ +I + R+ + M M + G + +
Sbjct: 332 GKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITF 391
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ CG +R++ M + +M G ++ TY L+ +C ++ A L E +
Sbjct: 392 SILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMIS 451
Query: 444 NGV 446
+GV
Sbjct: 452 SGV 454
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 21/274 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID A R + M R G + + ++ C+ G + A L+++
Sbjct: 390 TFSILIDGYCGAKRVDDGMKLLHEMSRR-GLVANTITYTTLIHGFCQLGNLNAALDLLQE 448
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV-----------AYN 272
++ + P+ C+ L+ G C +GKL +A + + M + +L YN
Sbjct: 449 MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYN 508
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ C + + SEAE++ +M + G+ + T+N +I LCK R ++A ++
Sbjct: 509 ILI------CGLINEGKF-SEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQM 561
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F MG G P+ TF LI + RVG+G E+ M G Y + C
Sbjct: 562 FDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQ 621
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETY-DLLMTKW 425
+ I A+ +F++M + G PD+ T ++L W
Sbjct: 622 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 655
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C G L+ A L +EM G V N +LD + + KD + +K
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488
Query: 299 LDME----YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+D++ +N V +V+T+N+LI L + +A +L+ M G P+ T+ +I
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + +R+ E +M D M S G++ + + C + R+ + VF +M G +
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVAN 608
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ TY L+ +C ++ A +F E + +GV
Sbjct: 609 AITYRTLIHGFCQVGNINGALDIFQEMISSGV 640
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 18/235 (7%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +LI G+C ++D+ +L EM R G T+ Y + + C+ +
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL---IHGFCQLGNL--- 439
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW----------- 339
+ A +L +M +GV NV T N L+ LC + +DA+++F M +
Sbjct: 440 -NAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
P+ T+ +LI L + E +E+ + M G Y + LC R+++A
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+F+ M + G +PD T+ L+ +C RV +F E R G+ YR
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYR 613
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 205 VVEKLCENGYASYAEKLVK---------DTA---NEIFPDDKICDLLIKGWCVDGKLDEA 252
+++ LC NG A ++ K D + N++ PD + ++LI G +GK EA
Sbjct: 464 LLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEA 523
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L EM G T+ YN ++D LC++ RLD EA ++ M G +V T
Sbjct: 524 EELYEEMPHRGLVPDTITYNSVID---GLCKQS---RLD-EATQMFDSMGSKGFSPDVVT 576
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
F LI+ CK+ R D +++F MG G N T+ LI Q + ++ M
Sbjct: 577 FTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI 636
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAM 400
S+G LT L E +++A+
Sbjct: 637 SSGVYPDTITIRNMLTGLWSKEELKRAV 664
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME +P N+ +F +LI C + A+ F ++ + G HP+ TF L+ L R
Sbjct: 102 MEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDR 161
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDGHNPDSET 417
V E + I K + F T + G+ R+ +A+++ ++M DG P+ T
Sbjct: 162 VSEALHFF-------HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT 214
Query: 418 YDLLMTKWCAHNRVDKANAL 437
Y ++ C D +AL
Sbjct: 215 YGTIVDGMCKMG--DTVSAL 232
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 129/309 (41%), Gaps = 32/309 (10%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFP 231
L R GR L M R +G D + V+ L G + A L+ +
Sbjct: 187 LCRLGRAGDALALLRGMAR-HGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAA 245
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D + L+ G C G++ EA RL M G V Y +L LCR +
Sbjct: 246 DVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQ---GLCRTRQADEAC 302
Query: 292 S------EAEKVLLD---------------------MEYNGVPRNVETFNVLISNLCKIR 324
+ E V+L+ M G P +V T+++L+ LCK+
Sbjct: 303 AMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLG 362
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R A+++ M E GC PN T+ L+ S + + M+D+M + G+++ + Y
Sbjct: 363 RFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYN 422
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ LC +++QA + ++MK+ G PD TY+ ++ C ++ +++A +F +
Sbjct: 423 GIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE 482
Query: 445 GVEVKPKEY 453
GV Y
Sbjct: 483 GVVANGITY 491
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GF + ++ LC++G A +LV++ ++ PD + +I C + ++EA
Sbjct: 413 GFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEA 472
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ + R + G + YN ++ + + R ++ RL SE M +G +V +
Sbjct: 473 EHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASE-------MLLHGCQLDVIS 525
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI LCK + ++ L M G PN ++ +LI L +A +V + E+ M
Sbjct: 526 YNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G Y + LC + A+++ EK+ + +PD TY++L++ C +D
Sbjct: 586 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 645
Query: 433 KANALFDEAVRNGV 446
A L D+A+ G+
Sbjct: 646 DAAMLLDKAISGGI 659
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLL--DMEYNGVPRNVETFNVLISNLCKIRRSE 327
+YN +L ++ R D A+ +LL M + VP TF V LC++ R+
Sbjct: 144 SYNVVLSTLA---------RADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAG 194
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
DA+ L M GC P+ + +I +L V E ++D M G A + + +
Sbjct: 195 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLV 254
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LCG+ R+ +A + ++M T G P TY L+ C + D+A A+
Sbjct: 255 LGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML 305
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 13/285 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
+ L RA L + RM RD + + LC G A A L++ A +
Sbjct: 149 LSTLARADCHADALLLYRRMLRDR-VPPTTFTFGVAARALCRLGRAGDALALLRGMARHG 207
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + +I G + EA L EM G +N ++ + L R +
Sbjct: 208 CVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVR--- 264
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA +++ M G +V T+ L+ LC+ R++++A + R+ E N
Sbjct: 265 ----EAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPE----VNVVML 316
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I+ ++ E+ + M S G Y + LC + R A+ + ++M+
Sbjct: 317 NTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEE 376
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G P+ TY L+ +C + D A A+ D+ + G + + Y
Sbjct: 377 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGY 421
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 12/245 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +L+ G C G+ A R+ EM G V Y+ +L CR +
Sbjct: 346 PDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLH---SFCRNG----M 398
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A +L M G N + +N +I LCK + + A +L M GC P+ T+
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L + E + + + G Y + L R ++ + + +M G
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
D +Y+ L+ C VD++ AL +E V G++ Y + L K GK
Sbjct: 519 CQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINEL-----CKAGK 573
Query: 471 KRETL 475
R+ L
Sbjct: 574 VRDAL 578
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 148 KAIHDF--LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
+A H F L++ V T + I L+R GR + L M +G + D S +
Sbjct: 471 EAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLL-HGCQLDVISYNGL 529
Query: 206 VEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ LC+ G + L+++ + I P++ ++LI C GK+ +A L++EM G
Sbjct: 530 IKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL 589
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
V YN + ++ LC+ A +L + V ++ T+N+LIS CK+R
Sbjct: 590 TPDIVTYNTL---INGLCK----VGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVR 642
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
+DA L + G PNE T+ +++++ + EG
Sbjct: 643 LLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEG 682
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 8/224 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LI G+C + +DEA L +EM++ G V Y+ ++D + K R P+
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI--PY 392
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
D ++ +M G P NV T++ LI LCK + AI LF +M + G PN TF
Sbjct: 393 VWD-----LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTF 447
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ L + R+ + E+ + + GY + Y + C +E+A+++ KM+
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMED 507
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+G PD+ T+++++ + + N FD+ V VE K E
Sbjct: 508 NGCIPDAVTFEIIIIALFKKDE-NGGNVGFDKKVWEIVEHKKGE 550
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ ID L + ++ G F M G D + ++ C G A L+ +
Sbjct: 203 STIIDALCKYQLVSEAYGLFSEMTVK-GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 227 -NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
I P+ ++L+ C +GK+ EAK + M + + + Y+ ++D + K
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+A+ V M GV +V T+ +LI+ CK + ++A+ LF M + P
Sbjct: 322 -------KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L ++ R+ ++ID M G Y + LC +++A+++F K
Sbjct: 375 VTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNK 434
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
MK G P++ T+ +L+ C R+ A +F + + G + Y V
Sbjct: 435 MKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D +L +++ C G ++ L K PD LI G C+ G++++A
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ GF+L V+Y +++ V K+ + A K+L ++ +V
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR-------AAIKLLRKIDGRLTKPDVVM 1068
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +I LCK + A LF+ M G + T+ LI ++ E ++++M
Sbjct: 1069 YNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMV 1128
Query: 373 SAGYAIGKKDYYEFLTRLC--GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+ Y + LC G + +++++S+ KM+ +G ++ T++++++ +
Sbjct: 1129 LKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDE 1188
Query: 431 VDKANALFDEAVRNGV 446
DK L E + G+
Sbjct: 1189 NDKVEKLLHEMIARGL 1204
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 7/216 (3%)
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTV------AYNCILDCVSKLCRKKDPFRLDSEAEKV 297
CV G+ EA E GFE G V A + + + +P + S A +
Sbjct: 890 CVVGE-GEADLDQVEAIHVGFEHGVVRGGLAMAERGVTSVGAYIRIPHNPMKHYSTAVSL 948
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+E G+ ++ T N+LI+ C + + + ++ + G HP+ TF LI L
Sbjct: 949 SHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCL 1008
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+V + D++ + G+ + + Y + +C I A+ + K+ PD
Sbjct: 1009 KGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVM 1068
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
Y+ ++ C H V KA LF E G+ Y
Sbjct: 1069 YNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTY 1104
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 108/282 (38%), Gaps = 46/282 (16%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D + + + R+E G + D +L +++ C G ++ ++
Sbjct: 66 LDSFAKMKHYSTAVSLSHRLELK-GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+P D + + LIKG C+ G++ +A ++ GF+L V+Y
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYG---------------- 168
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
LI+ +CKI + AIKL ++ PN +
Sbjct: 169 --------------------------TLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMY 202
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I +L + V E + M G + Y + C ++++A+ + +M
Sbjct: 203 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVL 262
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
NP+ TY++L+ C +V +A ++ AV VKP
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVL--AVMLKACVKP 302
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 75/185 (40%), Gaps = 7/185 (3%)
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ +N ILD +K+ L +E G+ ++ T N+LI+ C + +
Sbjct: 60 IQFNKILDSFAKMKHYSTAVSLSHR-------LELKGIQPDLITLNILINCFCHMGQITF 112
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+ ++ + G P+ T LIK L +V + D++ + G+ + + Y +
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLIN 172
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+C I A+ + +K+ P+ Y ++ C + V +A LF E G+
Sbjct: 173 GVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232
Query: 449 KPKEY 453
Y
Sbjct: 233 DVVTY 237
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 13/222 (5%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L+ + G + + N +++C + + F VL + G P +
Sbjct: 78 AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF-------SVLAKILKRGYPPDTV 130
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T N LI LC + + A+ ++ G N+ ++ LI + ++G+ I +
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGV---CKIGDTRAAIKLL 187
Query: 372 KSAGYAIGKKD---YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ + K + Y + LC + + +A +F +M G + D TY L+ +C
Sbjct: 188 QKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIE 247
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
++ +A L +E V + Y + L K VK+ K
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S ID L + G + + F +M +D G + + + ++++ LC+ G A+++ +D
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKM-KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQD 469
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ + + +++I G C G L+EA + +M G CI D V+
Sbjct: 470 LLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG---------CIPDAVT 516
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 139/313 (44%), Gaps = 14/313 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
I +AG L +RM D + ++ LC++G A E L + +
Sbjct: 179 ISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+PD +LI+ C D + +A +L EM G V YN + V+ +C++
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVL---VNGICKEG--- 288
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RLD EA K L DM +G NV T N+++ ++C R DA KL M G P+ TF
Sbjct: 289 RLD-EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + +G +++++M G Y L C +++++A+ E+M +
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
G PD TY+ ++T C +V+ A + ++ G Y L K A K
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK--AGKT 465
Query: 469 GKKRETLPEKMAR 481
GK + L E A+
Sbjct: 466 GKAIKLLDEMRAK 478
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I+ R Q + + M RD G D + ++V +C+ G A K + D ++
Sbjct: 246 IEATCRDSGVGQAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +++++ C G+ +A++L +M R GF V +N + ++ LCRK
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL---INFLCRKG--- 358
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L A +L M +G N ++N L+ CK ++ + AI+ RM GC+P+ T+
Sbjct: 359 -LLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ +L + +V + E+++++ S G + Y + L + +A+ + ++M+
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD+ TY L+ +VD+A F E R GV
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGV 515
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 124/276 (44%), Gaps = 10/276 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I R G+ + E +E G D + +++ C+ G + A ++ + +
Sbjct: 144 IRGFCRMGKTRKAAKILEVLEGS-GAVPDVITYNVMISGYCKAGEINNALSVLDRMS--V 200
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD + +++ C GKL +A + M + + Y +++ CR
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT---CRDSGV-- 255
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+A K+L +M G +V T+NVL++ +CK R ++AIK M GC PN T
Sbjct: 256 --GQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++++S+ R + ++++ M G++ + + LC + +A+ + EKM
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH 373
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+S +Y+ L+ +C ++D+A + V G
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 135/290 (46%), Gaps = 15/290 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + + GR + + F M G + + + +++ +C G AEKL+ D +
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F P ++LI C G L A + +M + G + +++YN +L C++K
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLH---GFCKEKKMD 396
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A + L M G ++ T+N +++ LCK + EDA+++ ++ GC P T+
Sbjct: 397 R----AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEK 405
+I L +A + G+ +++D M++ K D + + + G+ R +++A+ F +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDL---KPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ G P++ T++ +M C + D+A + G + Y +
Sbjct: 510 FERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD C LI+G+C GK +A ++ + G + YN + +S C+
Sbjct: 134 VPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVM---ISGYCKA----- 185
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
E L ++ V +V T+N ++ +LC + + A+++ RM + C+P+ T+
Sbjct: 186 --GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+LI++ + + VG+ +++D M+ G Y + +C R+++A+ M +
Sbjct: 244 ILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ T+++++ C+ R A L + +R G
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 30/235 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
I+ L R G + + E+M + +G + + S ++ C+ A E L + +
Sbjct: 351 INFLCRKGLLGRAIDILEKMPK-HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+PD + ++ C DGK+++A + ++ G + YN ++D ++K +
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 289 RL-----------DS-----------------EAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L D+ EA K + E GV N TFN ++ L
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGL 529
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
CK R+++ AI M GC P ET++ +LI+ L E E+++ + + G
Sbjct: 530 CKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E K L +M Y+G ++ LI C++ ++ A K+ + G P+ T+ V+I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMI 179
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+A + ++DRM + + Y L LC +++QAM V ++M
Sbjct: 180 SGYCKAGEINNALSVLDRMSVSPDVV---TYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY +L+ C + V +A L DE G Y V
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 14/257 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKL 249
GF + +++ LC G A EK+ K P+ + L+ G+C + K+
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ---PNSLSYNPLLHGFCKEKKM 395
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
D A M G V YN +L + K + +D A ++L + G
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED-------AVEILNQLSSKGCSPV 448
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
+ T+N +I L K ++ AIKL M P+ T+ L+ L + +V E +
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
+ G + + LC + ++A+ M G P +Y +L+
Sbjct: 509 EFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEG 568
Query: 430 RVDKANALFDEAVRNGV 446
+A L +E G+
Sbjct: 569 MAKEALELLNELCNKGL 585
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKDTANE 228
+D L + G+ T+ F M R G K + +++ G A + L AN
Sbjct: 381 LDYLCKNGKCTEARKIFYCMIRK-GIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANG 439
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P++ I ++++ + +DEA + M + G V Y ++D + KL R D
Sbjct: 440 ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV 499
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++ M +GV N FN L+ LC + R E A +LF+ M + G PN F
Sbjct: 500 LKFNQ-------MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFF 552
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ +L +V +ID M+ G Y + C R ++A + + M +
Sbjct: 553 NTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS 612
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PD +YD L+ +C R+D A LF E +R GV
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGV 650
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 9/259 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLL 239
+ + F RM + +G D + ++++ LC+ G A N+ + P+ + + L
Sbjct: 462 EAMHIFSRMSQ-HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ G C + ++A+ L EM+ G V +N I+ LC + A++++
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIM---CNLCNEGQVM----VAQRLID 573
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
ME GV NV ++N LI C R+++A +L M G P+ ++ L++ +
Sbjct: 574 SMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTG 633
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ + M G G Y L L R +A ++ M G D TY+
Sbjct: 634 RIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYN 693
Query: 420 LLMTKWCAHNRVDKANALF 438
+++ C N VD+A +F
Sbjct: 694 IILNGLCKTNCVDEAFKIF 712
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 9/253 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGW 243
+ MER G + + S ++ C G A +L+ + D I D L++G+
Sbjct: 571 LIDSMER-VGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGY 629
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G++D A L REM R G G V Y+ IL + R SEA+++ L+M
Sbjct: 630 CKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHT-------RRFSEAKELYLNMIK 682
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G ++ T+N++++ LCK ++A K+F + PN TF ++I L++ R +
Sbjct: 683 SGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKD 742
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++ + S G Y + + +++ ++F M+ G PDS + ++
Sbjct: 743 AMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIR 802
Query: 424 KWCAHNRVDKANA 436
+ +A A
Sbjct: 803 SLLGRGEIMRAGA 815
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 110/266 (41%), Gaps = 16/266 (6%)
Query: 215 ASYAEKLVKDTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+YA+K + D A IF PD +LI C G++D+A +M G
Sbjct: 452 CAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVT 511
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+V +N + V LC D + +AE++ +M GV NV FN ++ NLC +
Sbjct: 512 PNSVVFNSL---VYGLC-TVDRWE---KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
A +L M G PN ++ LI A R E +++D M S G Y
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDT 624
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L C RI+ A +F +M G P + TY ++ R +A L+ +++G
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSG 684
Query: 446 VEVKPKEYRVDPRYLKKPIAVKKGKK 471
+ Y + L K V + K
Sbjct: 685 QQWDIYTYNIILNGLCKTNCVDEAFK 710
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT---VAYNCILDCVSKLCRKKD 286
P+ C+ L+KG C + +++EA L M G T V YN I+D LC+ +
Sbjct: 158 MPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID---GLCKAQA 214
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R AE VL M GV +V T++ +I LCK + + A + M + G P+
Sbjct: 215 VDR----AEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +I L +A V + ++ M G Y + LC + +++A V + M
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
PD +TY+ L+ + + + +E G++ Y + YL K
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 18/254 (7%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+ AE +++ ++ D + +I G C +D A+ + + M G
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKG 264
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V YN I+D LC+ + R AE VL M GV +V T+N +I LCK
Sbjct: 265 VKPDVVTYNTIID---GLCKAQAVDR----AEGVLQHMIDKGVKPDVVTYNTIIDGLCKA 317
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK-- 381
+ + A + M + P+ T+ LI GE E++ R++ YA G
Sbjct: 318 QAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLST---GEWKEVVRRLEEM-YARGLDPD 373
Query: 382 --DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y L LC + +A +F M G P+ Y +L+ + A + L D
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433
Query: 440 EAVRNGVEVKPKEY 453
V NG+ P Y
Sbjct: 434 LMVANGIS--PNNY 445
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 24/279 (8%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLC-------ENGYASYAEKLVKDTANEIFPDDKI 235
+ F RM R K D + C E+G+A++ L+ T + ++ +
Sbjct: 72 VSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFG--LILKTGWRV--NEVV 127
Query: 236 CDLLIKGWCVDGKLDEAKR-LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ L+ G C ++DEA L R M G V+ N +L LC +K R++ EA
Sbjct: 128 INQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLL---KGLCNEK---RVE-EA 180
Query: 295 EKVLLDMEYNG---VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
++L M +G NV T+N +I LCK + + A + M + G + T+ +
Sbjct: 181 LELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTI 240
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A V + ++ M G Y + LC + +++A V + M G
Sbjct: 241 IDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 300
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
PD TY+ ++ C VD+A+ + + +VKP
Sbjct: 301 KPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK--DVKP 337
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 25/309 (8%)
Query: 148 KAIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
+A+H F ++ L P T ID L + GR + F +M D G + +
Sbjct: 462 EAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND-GVTPNSVVFNSL 520
Query: 206 VEKLCENGYASYAEKLVKDT------ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
V LC AE+L + N +F + +C+L C +G++ A+RL M
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNL-----CNEGQVMVAQRLIDSM 575
Query: 260 YRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
R G ++YN ++ C++ R D EA ++L M G+ ++ +++ L+
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAG--------RTD-EAAQLLDVMVSVGLKPDLISYDTLL 626
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
CK R ++A LF M G P T+ +++ L+ R E E+ M +G
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y L LC +++A +F+ + + P+ T+ +++ R A L
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746
Query: 438 FDEAVRNGV 446
F +G+
Sbjct: 747 FASIPSHGL 755
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 4/171 (2%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
N V ++ T+++L C++ R E F + + G NE L+ L A RV E
Sbjct: 84 NKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDE 143
Query: 364 G-DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN---PDSETYD 419
D ++ RM G L LC +R+E+A+ + M DG P+ TY+
Sbjct: 144 AMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYN 203
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
++ C VD+A + + GV++ Y L K AV + +
Sbjct: 204 TIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAE 254
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 144/344 (41%), Gaps = 50/344 (14%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
HD +V L + + I+ L + GR T L +R++ + + ++++ +C
Sbjct: 163 HDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKL-VQPNAVMYNMIIDNMC 221
Query: 211 ENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY--------- 260
+ + A L A I PDD C+ LI G+C+ G+L EA L +M
Sbjct: 222 KAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMY 281
Query: 261 --------------------------RGGFELGTVAYNCILD---CVSKLCRKKDPFRLD 291
+ L V YN ++D V ++ + KD F D
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIF--D 339
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A + GV NV+++ +I+ LCKI+ ++A+ LF M PN T+ L
Sbjct: 340 SMASR--------GVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSL 391
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L + ++ +++D M G Y L LC +++A+++ +K G
Sbjct: 392 IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI 451
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY +L+ C +++ A +F++ + G + Y V
Sbjct: 452 RPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTV 495
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C +DEA L EM V YN ++D + KL + +L E
Sbjct: 356 MINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDE----- 410
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G P N+ T+N ++ LCK + AI L + + G P+ T+ VLIK L Q+
Sbjct: 411 --MHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQS 468
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ + ++ + + GY + Y + C + A+++ KM+ +G P+++TY
Sbjct: 469 GKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTY 528
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
++++ + D A L E + G+
Sbjct: 529 EIVILSLFEKDENDMAEKLLREMIARGL 556
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 165/423 (39%), Gaps = 53/423 (12%)
Query: 21 FISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDD-PDQVIARSLSGELLENLEADP 79
F + +S FS F P NF F P NP I P + SL +L + + +
Sbjct: 3 FSTLRSVLFSVFIP----NF--SHFQQSP--NPNFIGLFPSSI---SLYSQLHHHQDEEN 51
Query: 80 LPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTD 139
IS + + H PTP ++Q FN L+ H LS
Sbjct: 52 NLISS-FNSLLHHKNPTPPIIQ---------------FNKILSSLVKAKHHSTALSLH-- 93
Query: 140 YFGRRKDFKAI-HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
++ + I DF N L +C +L G + F ++ + GF +
Sbjct: 94 ---QQMELNGIVSDFFTFN-------ILINCFSQL---GLNSLSFSVFGKILKK-GFDPN 139
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAR 257
+ +++ LC G+ A + F D++ LI G C G++ A +L +
Sbjct: 140 AITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLK 199
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
+ + V YN I+D + K D F L S+ M + + T N LI
Sbjct: 200 RVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ-------MVAKRISPDDFTCNSLI 252
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C + + ++A+ L ++M +P TF +L+ + + +V E M+
Sbjct: 253 YGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDII 312
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y + C ++ I +A +F+ M + G + ++Y ++ C VD+A L
Sbjct: 313 LDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNL 372
Query: 438 FDE 440
F+E
Sbjct: 373 FEE 375
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME NG+ + TFN+LI+ ++ + + +F ++ + G PN TF LIK L
Sbjct: 96 MELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGH 155
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + D++ + G+ + + Y + LC + RI A+ + +++ P++ Y++
Sbjct: 156 IHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 215
Query: 421 LMTKWCAHNRVDKANALFDEAV 442
++ C V+ A L+ + V
Sbjct: 216 IIDNMCKAKLVNDAFDLYSQMV 237
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 45/240 (18%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L + G+ + VL + M D G + + +++ LC+N + A L+ +
Sbjct: 387 TYNSLIDGLGKLGKISCVLKLVDEM-HDRGQPPNIITYNSILDALCKNHHVDKAIALLTN 445
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ I PD +LIKG C GKL++A
Sbjct: 446 LKDQGIRPDMYTYTVLIKGLCQSGKLEDA------------------------------- 474
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+KV D+ G +V T+ V+I C + A+ L +M + GC P
Sbjct: 475 -----------QKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIP 523
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ ++I SL++ ++++ M + G + +K Y ++ G+ + A +V+
Sbjct: 524 NAKTYEIVILSLFEKDENDMAEKLLREMIARGL-LDEKSYIYLASKETGVMGMGAAGTVY 582
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 90/227 (39%), Gaps = 20/227 (8%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L ++M G +N +++C S+L L+S + V + G N
Sbjct: 89 ALSLHQQMELNGIVSDFFTFNILINCFSQL-------GLNSLSFSVFGKILKKGFDPNAI 141
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
TFN LI LC A+ ++ G H ++ ++ LI L + R+ +++ R+
Sbjct: 142 TFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV 201
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
Y + +C + + A ++ +M +PD T + L+ +C ++
Sbjct: 202 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQL 261
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV----KKGKKRET 474
+A L + + ++PR I V K+GK +E
Sbjct: 262 KEAVGLLHKMILE---------NINPRMYTFSILVDAFCKEGKVKEA 299
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 9/283 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L +AG+ + F M++ GF D + VV+ C++G A +++++ +
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQ-GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 628
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P ++ G +LDEA L E G EL V Y+ ++D K+ R
Sbjct: 629 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI---- 684
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA +L +M G+ NV T+N L+ L K +A+ F M E C PN T+
Sbjct: 685 ---DEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 741
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + + + M+ G Y ++ L + I A S+FE+ K
Sbjct: 742 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 801
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+G PD+ +++ L+ NR +A +F+E G + K
Sbjct: 802 NGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIK 844
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 134/334 (40%), Gaps = 34/334 (10%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
CID +AG FF ++ G K D S ++ LC+ G AE+L A
Sbjct: 255 CIDCFGKAGNVDMAWKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 313
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P + +I G+ G+ ++A +L + G V++N IL C+ K + +
Sbjct: 314 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 373
Query: 288 FRL---------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
L EA ++L +ME+ + N+ T N+++ L
Sbjct: 374 LSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 433
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R+ E+A K+F + GC+P+ T+ LI L + +V E + ++M AG+
Sbjct: 434 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 493
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + R E +F+++ G PD + M V+K +F++
Sbjct: 494 VVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 553
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
G + Y + L K G+ RET
Sbjct: 554 IRSYGFLPDVRSYSILIHGL-----TKAGQARET 582
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 146/369 (39%), Gaps = 35/369 (9%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDR 172
+++ FN LT DE LS F +KD + T ID
Sbjct: 353 SVVSFNSILTCLGKKRKVDEALSLFEVM---KKDAEP------------NSSTYNIIIDM 397
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
L GR + + ME F + ++ ++V++LC+ A K+ + + P
Sbjct: 398 LCLGGRVEEAYRILDEMEHASLFP-NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 456
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D LI G G++DEA RL +M G V Y ++ RK+D
Sbjct: 457 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED----- 511
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
K+ ++ G ++ N + + K E +F + +G P+ ++ +L
Sbjct: 512 --GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 569
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A + E + MK G+A+ + Y + C ++ +A + E+MK
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 629
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYL 460
P TY ++ +R+D+A LF+EA G+E+ Y R+D YL
Sbjct: 630 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 689
Query: 461 KKPIAVKKG 469
+KKG
Sbjct: 690 ILEEMMKKG 698
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 45/272 (16%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I L A RP + L +M+ + G++ +V L G + A LV +
Sbjct: 186 IGALAEARRPERALELLRQMQ-EVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSC 244
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + ++ I + G +D A + E+ G + V+Y ++ + K R
Sbjct: 245 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRL---- 300
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EAE++ ME +N +I R EDA KL R+ E GC P+ +F
Sbjct: 301 ---GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 357
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ L GKK ++++A+S+FE MK
Sbjct: 358 NSILTCL-----------------------GKK------------RKVDEALSLFEVMKK 382
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
D P+S TY++++ C RV++A + DE
Sbjct: 383 DAE-PNSSTYNIIIDMLCLGGRVEEAYRILDE 413
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%)
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
EKVL +M G + L + L + RR +DA+ M P + + VLI +
Sbjct: 129 EKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L +A R E++ +M+ GY +G + + L ++ A+++ +++K PD
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
Y++ + + VD A F E G++
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLK 281
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 136/306 (44%), Gaps = 2/306 (0%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ K HD L+ L + I+ + + G + ++++ K D
Sbjct: 142 GQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLT-KPDVVM 200
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC+ S A L + T I D + LI G+C+ GKL EA L M
Sbjct: 201 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMV 260
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
Y ++D + K + K+ R S ++ +M G P +V T++ LI L
Sbjct: 261 LKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGL 320
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + AI LF +M + G PN TF +L+ L++ R+ + E+ + + GY +
Sbjct: 321 CKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNV 380
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C +E+A+++ KM+ +G P++ T++ ++ + DKA L +
Sbjct: 381 YTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQ 440
Query: 441 AVRNGV 446
+ G+
Sbjct: 441 MIARGL 446
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 128/298 (42%), Gaps = 36/298 (12%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G + D +L +++ C G ++ ++ +P + + LIKG C+ G++ +A
Sbjct: 88 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKA 147
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSK---------LCRKKD----------------- 286
++ GF+L V Y +++ V K L +K D
Sbjct: 148 LHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDA 207
Query: 287 --PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
++L SEA + +M G+ +V T+N LI C + + ++AI L M +P+
Sbjct: 208 LCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPD 267
Query: 345 ETTFLVLIKSLYQAARVGEGD-------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
T+ +L+ +L + +V E ++ID M+ G Y + LC ++
Sbjct: 268 VYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 327
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+A+++F KMK G P+ T+ +L+ R+ A +F + + G + Y V
Sbjct: 328 RAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 385
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+E G+ ++ T N+LI+ C + + + ++ + G P+ T LIK L +
Sbjct: 84 LELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQ 143
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + D++ + G+ + + Y + +C I A+ + +K+ PD Y
Sbjct: 144 VKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYST 203
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
++ C + V +A LF E G+ Y
Sbjct: 204 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 236
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 6/179 (3%)
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
VL + G P + T N LI LC + + A+ ++ G N+ + LI +
Sbjct: 115 VLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGV- 173
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKD---YYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
++G+ I +K + K D Y + LC + + +A +F +M G +
Sbjct: 174 --CKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 231
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKR 472
D TY+ L+ +C ++ +A L + V + Y + L K VK+ K+R
Sbjct: 232 DVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRR 290
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ++ L GR + FF+ M R G K + +++ G S L+
Sbjct: 310 TYGSLLNYLCNNGRCREARFFFDSMIRK-GIKPNVAIYGILIHGYATKGALSEMHDLLNL 368
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + PD I +++ + +DEA + +M + G V + ++D + KL R
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D ++ M GV N+ FN L+ LC + + E A + ++ M G P
Sbjct: 429 VDDAVLKFNQ-------MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP 481
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ F ++ +L +V + +ID M+ G Y + C + RI++A
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSL 541
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ M + G PD TY+ L+ +C R+D A +F E +RNG+
Sbjct: 542 DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGI 584
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 129/336 (38%), Gaps = 56/336 (16%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGF---FERMERDYGFKRDKDSLRLVVEKLCENGYASY 217
LG D L+ RP ++ F + R G + LVV S
Sbjct: 28 LGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVV---------SL 78
Query: 218 AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+++++ ++ PD +LI +C G+L+ + + G+ + + N +L
Sbjct: 79 FNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL-- 136
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LC K RL + ++ M G +V ++N L+ C +R+E+A++L + M
Sbjct: 137 -KGLCDAK---RLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 338 EW---GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+ C PN ++ +I + +V + + M G Y + LC +
Sbjct: 193 DSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLM------TKW----------------------- 425
+++A VF++M G PD++TY+ L+ KW
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYG 312
Query: 426 ------CAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C + R +A FD +R G++ Y +
Sbjct: 313 SLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGI 348
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 115/276 (41%), Gaps = 9/276 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLL 239
+ + F +M++ G D + +++ LC+ G A NE + P+ + + L
Sbjct: 396 EAMHIFNKMKQQ-GLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ G C K ++AK EM G V +N IL LC K + A++++
Sbjct: 455 VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTIL---CNLCTKGQVMK----AQRLID 507
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
ME G +V ++ LI C + R ++A K M G P+E T+ L+ +A
Sbjct: 508 LMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ + + M G G Y L L R +A ++ M T G + Y+
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYN 627
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+++ +N VD+A LF +++ + +
Sbjct: 628 IILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C +D A+ + ++M G + YNC++ + + K+ R+ L
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRM-------L 296
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M +G+ + T+ L++ LC R +A F M G PN + +LI
Sbjct: 297 EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATK 356
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E ++++ M G + + T I++AM +F KMK G +PD +
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNF 416
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
L+ C RVD A F++ + GV
Sbjct: 417 GALIDALCKLGRVDDAVLKFNQMMNEGV 444
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD+ + L+ G+C G++D+A + REM R G G V Y+ IL + R
Sbjct: 551 PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTT-------RR 603
Query: 291 DSEAEKVLLDME--------------YNGVPRN---------------------VETFNV 315
SEA+++ L+M NG+ +N + TFN+
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I L K R+EDA+ LF + +G P+ T+ ++ ++L + + E D++ M+ +G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ + RL I +A + K+ + ++ T +L++
Sbjct: 724 TTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 121/304 (39%), Gaps = 43/304 (14%)
Query: 182 VLGFFERMERDYGFKRDKD--SLRLVVEKLC-----ENGYASYAEKLVKDTANEIFPDDK 234
V+ F RM R+ K D + +++ C E+G+A++ L+ + + ++
Sbjct: 75 VVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFG--LILKSGWRV--NNI 130
Query: 235 ICDLLIKGWCVDGKLDEAKR-LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL--- 290
+ + L+KG C +L EA L + M G V+YN +L R ++ L
Sbjct: 131 VINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHM 190
Query: 291 --DSE--------------------------AEKVLLDMEYNGVPRNVETFNVLISNLCK 322
DS+ A + L+M G+ NV T+ +I LCK
Sbjct: 191 MADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ + A +F +M + G P+ T+ LI + E M++ M + G
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y L LC R +A F+ M G P+ Y +L+ + + + + L + V
Sbjct: 311 YGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMV 370
Query: 443 RNGV 446
NG+
Sbjct: 371 ENGL 374
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 139/345 (40%), Gaps = 32/345 (9%)
Query: 158 KEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
KE + P T + ID + + + + M G + S V+ LC G
Sbjct: 235 KEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG-GVAANLISYNSVINGLCGKGRM 293
Query: 216 SYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
S +LV++ + PD+ + L+ G+C +G L + L EM G V Y +
Sbjct: 294 SEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTL 353
Query: 275 LDCVSK---LCRKKDPF-------------------------RLDSEAEKVLLDMEYNGV 306
++C+ K L R + F L +EA KVL +M +G
Sbjct: 354 INCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGF 413
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T+N L+ C + R ++A+ + M E G P+ ++ +I + +G+ +
Sbjct: 414 SPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQ 473
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
M + M G Y + LC +++ +A +F +M G PD TY L+ +C
Sbjct: 474 MKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYC 533
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+ KA L DE V+ G Y V L K K K+
Sbjct: 534 VDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 2/218 (0%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
F + DL++K G + +A L R GF ++YN +LD + L R R
Sbjct: 129 FSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDAL--LRRSSSNHR 186
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+AE+V DM NGV NV T+NV+I + E + +M + G PN T+
Sbjct: 187 DYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYN 246
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI + + +V E ++ M G A Y + LCG R+ + + E+M+
Sbjct: 247 TLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGK 306
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G PD TY+ L+ +C + + L E V G+
Sbjct: 307 GLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLS 344
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 153/395 (38%), Gaps = 43/395 (10%)
Query: 84 QRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNA---NFSHTDETLSFFTDY 140
QRL + H TP + L S R +L F W A NF T
Sbjct: 28 QRLASLSPHFTPQAA--SYVLLNSQSDQRTLLNFLTWAQAQAQAHNFFFTPHCKCLALHI 85
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLAS------------------------CIDRLVRA 176
R K ++ H D L T AS + L R
Sbjct: 86 LVRFKLYRTAHSLAADLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRL 145
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY-----AEKLVKDTA-NEIF 230
G + L R +GF S V++ L +++ AE++ +D N +
Sbjct: 146 GFVPKALTLLHLANR-HGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVS 204
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ +++I+G G L++ R+M + G V YN ++D C+KK
Sbjct: 205 PNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDAS---CKKKKV--- 258
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA +L M GV N+ ++N +I+ LC R + +L M G P+E T+
Sbjct: 259 -KEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ + + +G ++ M G + Y + +C + +A+ +F++M+ G
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P+ TY L+ +C +++A + E + +G
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 22/298 (7%)
Query: 150 IHDFLVDNKEVLGPK------TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLR 203
+H LV E++G T + I+ + +AG ++ + F++M R G + ++ +
Sbjct: 328 LHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM-RVRGLRPNERTYT 386
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ C+ G + A K++ + F P + L+ G+C G++ EA + R M
Sbjct: 387 TLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVER 446
Query: 263 GFELGTVAYNCILDCVSKLCRKKD---PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G V+Y+ + ++ CR+++ F++ E M GV + T++ LI
Sbjct: 447 GLPPDVVSYSTV---IAGFCRERELGKAFQMKEE-------MVEKGVLPDTVTYSSLIQG 496
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LC ++ +A LF M G P+E T+ LI + + + + D M G+
Sbjct: 497 LCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPD 556
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + L R + A + K+ + PD TY+ L+ C++N L
Sbjct: 557 NVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSNNEFKSVEGL 613
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ ID + + + + M G D + ++ C G A L
Sbjct: 217 TIIDSMCKVKLVNEAFDLYSEMVSK-GISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275
Query: 228 E-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
E I P+ ++L+ G+C + +L EAK + M + G + YN ++D + C K+
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD---RYCLVKE 332
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
++A+ + + GV N+ +++++I CKI++ ++A+ LF M P+
Sbjct: 333 V----NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVV 388
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI L + ++ +++D M G K Y L LC ++++A+++ KM
Sbjct: 389 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM 448
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
K +G PD TY L+ C + R++ A +F++ + G
Sbjct: 449 KDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKG 487
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 12/282 (4%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L +C +L + VL +M G++ + +L +++ LC G A +
Sbjct: 113 LINCFSQLGQNPLSFSVLAKILKM----GYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168
Query: 226 ANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
F +K+ LI G C G+ A +L R + + V YN I+D + K+
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ F L SE M G+ +V T+N LIS C + + +DA LF +M +PN
Sbjct: 229 NEAFDLYSE-------MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPN 281
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
TF +L+ + R+ E ++ M G Y + R C ++ + +A +F
Sbjct: 282 VYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFN 341
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ G NP+ +Y +++ +C +VD+A LF E N +
Sbjct: 342 TISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI 383
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++I G+C K+DEA L +EM+ V YN ++D + KL + S A K+
Sbjct: 357 IMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKI-------SYALKL 409
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ +M GVP + T+N ++ LCK + + AI L +M + G P+ T+ L+ L +
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
R+ + + + + GY + Y + C ++++ + KM+ +G P++ T
Sbjct: 470 NGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVT 529
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y++++ + DKA L E + G+
Sbjct: 530 YEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 44/319 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
TL + I L G+ Q L F +++ GF +K S ++ LC+ G S A +L++
Sbjct: 144 TLTTLIKGLCLKGQIHQALQFHDKVVA-LGFHLNKVSYGTLINGLCKVGQTSAALQLLRR 202
Query: 225 T------------------------ANEIF------------PDDKICDLLIKGWCVDGK 248
NE F PD + LI G+C+ GK
Sbjct: 203 VDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGK 262
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+ +A L +M +N ++D C+++ RL EA+ VL M G+
Sbjct: 263 MKDATDLFNKMIFENINPNVYTFNILVD---GFCKER---RL-KEAKNVLAMMMKQGIKP 315
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+N L+ C ++ A +F + + G +PN ++ ++I + +V E +
Sbjct: 316 DVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF 375
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M Y + LC + +I A+ + ++M G D TY+ ++ C +
Sbjct: 376 KEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN 435
Query: 429 NRVDKANALFDEAVRNGVE 447
++VDKA AL + G++
Sbjct: 436 HQVDKAIALLTKMKDEGIQ 454
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 126/284 (44%), Gaps = 9/284 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
LV++ + V+ +ME + G D L +++ + G + ++ + P
Sbjct: 82 LVKSNHYSTVVSLHRQMEFN-GITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEP 140
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ LIKG C+ G++ +A + ++ GF L V+Y +++ + K+ +
Sbjct: 141 NVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQT------- 193
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A ++L ++ V NV +N +I ++CK++ +A L+ M G P+ T+ L
Sbjct: 194 SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNAL 253
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I ++ + ++ ++M + + C R+++A +V M G
Sbjct: 254 ISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGI 313
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY+ LM ++C V+KA +F+ + GV Y +
Sbjct: 314 KPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S +D L + + + + +M +D G + D + +V+ LC+NG A + +D
Sbjct: 424 TYNSILDALCKNHQVDKAIALLTKM-KDEGIQPDICTYTTLVDGLCKNGRLEDARIVFED 482
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
D I +I+G+C G DE+ L +M G V Y I +C
Sbjct: 483 LLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEII------ICS 536
Query: 284 KKDPFRLDSEAEKVLLDMEYNGV 306
D D +AEK+L +M G+
Sbjct: 537 LFDKDEND-KAEKLLREMITRGL 558
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 34/293 (11%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANEIFPDDKI 235
GR L + M R G + + + +++E +C+N G+ L + A P+
Sbjct: 156 GRVADALSLLDDMLR-RGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVT 214
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSE 293
+++I G C +G++D+A+ L ++ G + TV+Y +L C SK R D L +E
Sbjct: 215 YNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASK--RWDDVEELFAE 272
Query: 294 ----------------------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
A +VL M + N N++I+++CK R
Sbjct: 273 MMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGR 332
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+DA K MG +GC+P+ ++ ++K L +A R + E++ M + +
Sbjct: 333 VDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
F+ LC IEQA+ + E+M+ G TY+ L+ +C +D A LF
Sbjct: 393 FICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF 445
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 35/316 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
I+ + + GR F M YG D S V++ LC + A++L+K+ N
Sbjct: 324 INSICKQGRVDDAFKFLNNMG-SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNN 382
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CV-------- 278
P++ + I C G +++A L +M G +G V YN +++ CV
Sbjct: 383 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSAL 442
Query: 279 -------------------SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ LC + RLD+ AE V +M + P NV TFNVL++
Sbjct: 443 ELFRSMPCKPNTITYTTLLTGLCNAE---RLDAAAELVA-EMLHRDCPPNVVTFNVLVNF 498
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C+ ++AI+L +M E GC PN T+ L + + + E++ + S G +
Sbjct: 499 FCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPD 558
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ + L +R+E+A+ +F + G P + Y+ ++ C + +D A
Sbjct: 559 VITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLA 618
Query: 440 EAVRNGVEVKPKEYRV 455
V NG Y +
Sbjct: 619 YMVSNGCMPNESTYII 634
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 11/231 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC G S A ++++ P D + L+ G+C G LD A+RL G
Sbjct: 81 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLI-----GS 135
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ AY + LC D R+ ++A +L DM G NV T+ VL+ +CK
Sbjct: 136 MPVAPDAYT-YTPLIRVLC---DRGRV-ADALSLLDDMLRRGCQPNVVTYTVLLEAMCKN 190
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
E A+ + M GC PN T+ V+I + + RV + ++++R+ S G Y
Sbjct: 191 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSY 250
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
L LC +R + +F +M P+ T+D+L+ +C V++A
Sbjct: 251 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 301
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +C LI+ C G+ +A R+ R G + AYN + V+ CR L
Sbjct: 73 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTL---VAGYCRYG---HL 126
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+ A +++ M V + T+ LI LC R DA+ L M GC PN T+ V
Sbjct: 127 DA-ARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 182
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L++++ + + + ++D M++ G Y + +C R++ A + ++ + G
Sbjct: 183 LLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
PD+ +Y L+ CA R D LF E + P E D
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK--NCMPNEVTFD 286
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 147/372 (39%), Gaps = 17/372 (4%)
Query: 84 QRLHLIFSHVTPT-PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFG 142
Q L + H T +L +N + GR F +L ++ +T+S+ T G
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFK-FLNNMGSYGCNPDTISYTTVLKG 361
Query: 143 -----RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
R D K + +V N T + I L + G Q + E+M+ ++G
Sbjct: 362 LCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ-EHGCTV 420
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ +V C G+ A +L + + P+ L+ G C +LD A L
Sbjct: 421 GVVTYNALVNGFCVQGHIDSALELFRSMPCK--PNTITYTTLLTGLCNAERLDAAAELVA 478
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM V +N + V+ C+K LD E V ME+ P N+ T+N L
Sbjct: 479 EMLHRDCPPNVVTFNVL---VNFFCQKG---FLDEAIELVEQMMEHGCTP-NLITYNTLF 531
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ K SEDA++L + + G P+ TF +I L + RV E +M + G
Sbjct: 532 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMR 591
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + L LC I+ A+ M ++G P+ TY +L+ + +A L
Sbjct: 592 PKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDL 651
Query: 438 FDEAVRNGVEVK 449
GV K
Sbjct: 652 LSMLCSRGVVSK 663
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ LCR+ S+A +VL E +G P +V +N L++ C+ + A +L +G
Sbjct: 82 IRNLCRRGRT----SDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL---IG 134
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
P+ T+ LI+ L RV + ++D M G Y L +C E
Sbjct: 135 SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFE 194
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
QAM+V ++M+ G P+ TY++++ C RVD A L + G + Y
Sbjct: 195 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTT-- 252
Query: 458 RYLKKPIAVKKGKKRETLPEKMARK 482
LK A K+ E L +M K
Sbjct: 253 -LLKGLCASKRWDDVEELFAEMMEK 276
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 15/272 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D L +AGR + ERM + G D + V LC++G A ++++ +
Sbjct: 194 MDGLCKAGRLQEAEQLLERM-KASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSD 252
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKDP 287
P+ + ++ G C GK+D A + +M G L V Y+ ++D + KL R +
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ-- 310
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
EA V+ M G +V T++ L++ LCK + E+A++ M GC PN T
Sbjct: 311 -----EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVT 365
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAI-----GKKDYYEFLTRLCGIERIEQAMSV 402
+ L+ L R+ E + M++ M S G Y + LC RI+ A+
Sbjct: 366 YCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKF 425
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
F++M++ G +PD +Y ++ R +A
Sbjct: 426 FQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 15/325 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ + GRP E M G + + S ++E LC+ AE+LV+D
Sbjct: 12 TFNALVNGFSKQGRPGDCERLLETMAA-RGIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70
Query: 225 T---ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
PD L+ G+C GK++E++ L +E+ G + Y ++ + L
Sbjct: 71 MISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM---ASL 127
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C+ E+++ G + TFN LIS C+ + E A L M G
Sbjct: 128 CKSARLGEALELLEEMI----RAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGV 183
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
+ T+ L+ L +A R+ E +++++RMK++G A Y F+ LC ++ A
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQ 243
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE-AVRNGVEVKPKEYRVDPRYL 460
V E+M+ H+P+ TY+ ++ C ++D A + ++ A +G + Y L
Sbjct: 244 VLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303
Query: 461 KKPIAVKKGKKRETLPEKMARKRRR 485
K + + ++ ++ E MAR R
Sbjct: 304 CK---LGRTQEARSVMEAMARAGCR 325
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 123/300 (41%), Gaps = 31/300 (10%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G K D + +++ LC+ G AE+L++ A+ PD + G C GK+ A
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNA 241
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ +M + V YN ILD LC+ ++D+ E + +G NV
Sbjct: 242 HQVLEQMRDSDHDPNVVTYNTILD---GLCKSG---KIDTALEMMEQMASSDGCGLNVVG 295
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ ++ LCK+ R+++A + M GC P+ T+ L+ L +A ++ E E + M
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM-----KTDGHNPDSETYDLLMTKWCA 427
G Y + LC R+ +A + E+M D P TY+ L+ C
Sbjct: 356 MEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCK 415
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLK 487
R+D A F G DP G T+ E +AR R L+
Sbjct: 416 AGRIDDALKFFQRMRSQG---------CDP----------DGVSYSTIVEGLARSGRALQ 456
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ LI G C + L+ A L + M G + V YN ++D LC+ RL EAE+
Sbjct: 156 NTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMD---GLCKAG---RLQ-EAEQ 208
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M+ +G +V ++ + LCK + +A ++ +M + PN T+ ++ L
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLC 268
Query: 357 QAARVGEGDEMIDRMKSA-GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ ++ EM+++M S+ G + Y + LC + R ++A SV E M G PD
Sbjct: 269 KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDV 328
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY L+ C ++++A E G + Y
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M R G +V +N +++ SK R D E++L M G+ NV ++N L+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGD-------CERLLETMAARGIQPNVVSYNGLLE 53
Query: 319 NLCKIRRSEDAIKLFYRMGEWG--CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
LCK+ R +A +L M G P+ T+ L+ +A +V E E++ + S G
Sbjct: 54 GLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGL 113
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + + LC R+ +A+ + E+M G P T++ L++ C ++ A++
Sbjct: 114 RPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADS 173
Query: 437 LFDEAVRNGVEVKPKEY 453
L +GV+ Y
Sbjct: 174 LLQTMAASGVKADVVTY 190
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 173/452 (38%), Gaps = 81/452 (17%)
Query: 71 LLENLEADPLPISQRLH--LIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFS 128
LL L D L + + L+ L+ + TP + L AGR L + A
Sbjct: 115 LLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRVFDAMPARNE 174
Query: 129 HTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFER 188
+ L+ GR D A+ D + + V+ +A R GR + +R
Sbjct: 175 FSSGILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAG----FCREGRVDEAERLVDR 230
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF------PDDKICDLLIKG 242
M R G + + + LC+ G A ++ D E + PD D+++ G
Sbjct: 231 M-RAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDM-QEAWEQGLPRPDQVTFDVMLSG 288
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
+C G +DEA L M GGF +YN L + K R EA+++L +M
Sbjct: 289 FCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRV-------GEAQELLSEMA 341
Query: 303 YNGVPRNVETFNVLISNLCK------IRRSED---------------------------- 328
+ GV N T+N+++ LCK +RR ED
Sbjct: 342 HEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTT 401
Query: 329 -AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A ++ M + GC PN T+ VL++SL +A R E + +++RM GY++ +
Sbjct: 402 AANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIII 461
Query: 388 TRLCGIERIEQAMSVFEKMKTDGH-----------------------NPDSETYDLLMTK 424
LC ++E AM + + M +G PD TY LM
Sbjct: 462 DGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNA 521
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
C R D+A E + G ++ P D
Sbjct: 522 LCKEGRFDEAKKKLVEMI--GKDISPDSVIYD 551
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 8/249 (3%)
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+C+ ++ G+C +G++DEA+RL M G V +N + + K R + +R+ ++
Sbjct: 207 VCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDM 266
Query: 295 EKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
++ G+PR + TF+V++S C ++A L M G ++ +
Sbjct: 267 QEAW----EQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLS 322
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L + RVGE E++ M G Y + LC + V + +++ P
Sbjct: 323 GLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTP 382
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
D TY L+ +C+ AN + DE + G Y V L+ + + + E
Sbjct: 383 DVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNV---LLQSLLKAGRTTEVE 439
Query: 474 TLPEKMARK 482
L E+M+ K
Sbjct: 440 RLLERMSEK 448
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 31/265 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GF R +S + L +NG A++L+ + A+E + P+ ++++ G C +GK +
Sbjct: 309 GFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDV 368
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+R+ + G V Y +L C K + + A ++L +M G N+ T
Sbjct: 369 RRVEDFVRSGVMTPDVVTYTSLL---HAYCSKGNT----TAANRILDEMAQKGCAPNLFT 421
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NVL+ +L K R+ + +L RM E G + + ++I L + +++ +++D M
Sbjct: 422 YNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMW 481
Query: 373 SAG-----------------YAIGKK------DYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+ G +I K Y + LC R ++A +M
Sbjct: 482 NEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGK 541
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKA 434
+PDS YD + +C H + A
Sbjct: 542 DISPDSVIYDTFIHGYCMHGKTSLA 566
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ L++AGR T+V ERM + G+ D S ++++ LC N A +V
Sbjct: 426 LQSLLKAGRTTEVERLLERMS-EKGYSLDTASCNIIIDGLCRNSKLEMAMDIV------- 477
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL---GTVAYNCILDCVS------K 280
DG +E + R + L +++ +C+ D ++
Sbjct: 478 ----------------DGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNA 521
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC++ R D EA+K L++M + + ++ I C ++ AIK+ M +
Sbjct: 522 LCKEG---RFD-EAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRS 577
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C+P+ ++ +LI + + E +++ MK G + Y + CG + +AM
Sbjct: 578 CNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAM 637
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ ++M + P+ ++ LL+ +C A +FD A+
Sbjct: 638 PLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVAL 679
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 117/306 (38%), Gaps = 34/306 (11%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TANEIF 230
LV+ GR + M + G + + + ++V+ LC+ G A + + V+D + +
Sbjct: 324 LVKNGRVGEAQELLSEMAHE-GVQPNSYTYNIIVDGLCKEGKA-FDVRRVEDFVRSGVMT 381
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ +C G A R+ EM + G YN +L + K R
Sbjct: 382 PDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRT------ 435
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG---------- 340
+E E++L M G + + N++I LC+ + E A+ + M G
Sbjct: 436 -TEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNS 494
Query: 341 -------------CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
C P+ T+ L+ +L + R E + + M + Y F+
Sbjct: 495 FVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFI 554
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C + A+ V M+ NP + +Y+LL+ + + D+ L E G+
Sbjct: 555 HGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGIS 614
Query: 448 VKPKEY 453
Y
Sbjct: 615 SNVMTY 620
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 132/298 (44%), Gaps = 8/298 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D ++++ T + +D + + G L +ME +
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++G S A+ L + + IFPD + +I G+C G+ +A++L +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V YN +++ K + F EA ++ +M G+ N T+N +I
Sbjct: 318 ERKISPDVVTYNALINAFVK----EGKFF---EAAELYDEMLPRGIIPNTITYNSMIDGF 370
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY M GC P+ TF LI A R+ +G E++ M G
Sbjct: 371 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C + + A+ + ++M + G PD T + L+ C + ++ A +F
Sbjct: 431 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 488
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 16/287 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM D G + + + +V+ +C+ G A L++
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + I P+ I +I C DG+ +A+ L EM G YN + + C
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM---IVGFC 301
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
S+AE++L +M + +V T+N LI+ K + +A +L+ M G
Sbjct: 302 SSGRW----SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 357
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL---CGIERIEQA 399
PN T+ +I + R+ ++M M + G + D + F T + CG +RI+
Sbjct: 358 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS---PDVFTFTTLIDGYCGAKRIDDG 414
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M + +M G ++ TY+ L+ +C ++ A L + + +GV
Sbjct: 415 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 461
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 125/288 (43%), Gaps = 20/288 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID A R + M R G + + ++ C G + A L +
Sbjct: 397 TFTTLIDGYCGAKRIDDGMELLHEMPR-RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-----------GFELGTVAYN 272
++ + PD C+ L+ G C +GKL +A + + M + G E + YN
Sbjct: 456 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 515
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ C + + EAE++ +M + G+ + T++ +I LCK R ++A ++
Sbjct: 516 ILI------CGLINEGKF-LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F MG PN TF LI +A RV +G E+ M G Y +
Sbjct: 569 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 628
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ I A+ +F++M + G PD+ T ++T + + +++A A+ ++
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 676
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 140/382 (36%), Gaps = 78/382 (20%)
Query: 146 DFKAIHDFLVDNKEVLGPKTLASCID------RLVRAGRPTQVLGFFERMERDYGFKRDK 199
+ K + D + ++L + L S +D +VR RP V+ +++MER + D
Sbjct: 56 EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ-IRCDI 114
Query: 200 DSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA------ 252
S ++++ C +A K T + PD L+ G CV+ ++ EA
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174
Query: 253 -----------------KRLARE------------MYRGGFELGTVAYNCILDCVSKLCR 283
L RE M G + + Y I+D +C+
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD---GMCK 231
Query: 284 KKDPFR------------------------LDS--------EAEKVLLDMEYNGVPRNVE 311
K D +DS +A+ + +M+ G+ ++
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N +I C R DA +L M E P+ T+ LI + + + E E+ D M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM 351
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G Y + C +R++ A +F M T G +PD T+ L+ +C R+
Sbjct: 352 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 411
Query: 432 DKANALFDEAVRNGVEVKPKEY 453
D L E R G+ Y
Sbjct: 412 DDGMELLHEMPRRGLVANTVTY 433
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA------------NEIFPDDKICDLLIK 241
G D + +++ LC+NG A ++ K N + PD ++LI
Sbjct: 460 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 519
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G +GK EA+ L EM G T+ Y+ ++D LC++ RLD EA ++ + M
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID---GLCKQS---RLD-EATQMFVSM 572
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
NV TFN LI+ CK R +D ++LF MG G + ++ LI + +
Sbjct: 573 GSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNI 632
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++ M S+G LT E +E+A+++ E ++
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 147/342 (42%), Gaps = 14/342 (4%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G+ + I + L + V T I +AG L +RM D
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS----VSPDVV 205
Query: 201 SLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++ LC++G A E L + + +PD +LI+ C D + A +L EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G V YN + V+ +C++ RLD EA K L DM +G NV T N+++ +
Sbjct: 266 RDRGCTPDVVTYNVL---VNGICKEG---RLD-EAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+C R DA KL M G P+ TF +LI L + +G +++++M G
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y L C +++++A+ E+M + G PD TY+ ++T C +V+ A + +
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 440 EAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
+ G Y L K A K GK + L E A+
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAK--AGKTGKAIKLLDEMRAK 478
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 124/257 (48%), Gaps = 8/257 (3%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKL 249
RD G D + ++V +C+ G A K + D ++ P+ +++++ C G+
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
+A++L +M R GF V +N + ++ LCRK L A +L M +G N
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNIL---INFLCRKG----LLGRAIDILEKMPQHGCQPN 378
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
++N L+ CK ++ + AI+ RM GC+P+ T+ ++ +L + +V + E+++
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
++ S G + Y + L + +A+ + ++M+ PD+ TY L+
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 430 RVDKANALFDEAVRNGV 446
+VD+A F E R G+
Sbjct: 499 KVDEAIKFFHEFERMGI 515
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 143/333 (42%), Gaps = 13/333 (3%)
Query: 116 GFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDR 172
G H+ + N++F+ D + R + + FL V + V + I
Sbjct: 87 GNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 146
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
R G+ + E +E G D + +++ C+ G + A ++ + + PD
Sbjct: 147 FCRLGKTRKAAKILEILEGS-GAVPDVITYNVMISGYCKAGEINNALSVLDRMS--VSPD 203
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ +++ C GKL +A + M + + Y +++ CR
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT---CRDSGV----G 256
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A K+L +M G +V T+NVL++ +CK R ++AIK M GC PN T +++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+S+ R + ++++ M G++ + + LC + +A+ + EKM G
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P+S +Y+ L+ +C ++D+A + V G
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 130/269 (48%), Gaps = 15/269 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + + GR + + F M G + + + +++ +C G AEKL+ D +
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F P ++LI C G L A + +M + G + +++YN +L C++K
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH---GFCKEKKMD 396
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A + L M G ++ T+N +++ LCK + EDA+++ ++ GC P T+
Sbjct: 397 R----AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEK 405
+I L +A + G+ +++D M++ K D + + + G+ R +++A+ F +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDL---KPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ G P++ T++ +M C + D+A
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 30/235 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
I+ L R G + + E+M + +G + + S ++ C+ A E L + +
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+PD + ++ C DGK+++A + ++ G + YN ++D ++K +
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 289 RL-----------DS-----------------EAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L D+ EA K + E G+ N TFN ++ L
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
CK R+++ AI M GC PNET++ +LI+ L E E+++ + + G
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E K L +M Y+G ++ LI C++ ++ A K+ + G P+ T+ V+I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+A + ++DRM + + Y L LC +++QAM V ++M
Sbjct: 180 SGYCKAGEINNALSVLDRMSVSPDVV---TYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY +L+ C + V A L DE G Y V
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 102/263 (38%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF + +++ LC G A + L K + P+ + L+ G+C + K+D A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
M G V YN +L + K + +D A ++L + G + T
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED-------AVEILNQLSSKGCSPVLIT 451
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +I L K ++ AIKL M P+ T+ L+ L + +V E + +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G + + LC + ++A+ M G P+ +Y +L+
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
+A L +E G+ K +V
Sbjct: 572 EALELLNELCNKGLMKKSSAEQV 594
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKD 224
++ ID L + G + LG ++ ER G D + +++ C G + + L K
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGER--GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ PDD ++LI C +G++ EA+ + M + G + V YN +++ C +
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALME---GYCSR 313
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
++ EA ++ M G+ +V +NVLI CK + ++A+ LF + P
Sbjct: 314 ENV----HEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT 369
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
++ LI L + R+ +++D M + Y + LC RI +A+ V
Sbjct: 370 IASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLV 429
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M G P+ TY+ +M +C N V+ A +F+ V++G+E Y V
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNV 480
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 9/259 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
F RM + G + D + ++++ C+ A L K+ N+ + P + LI G
Sbjct: 322 LFNRMVKR-GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G++ K+L EM+ V YN ++D LC++ EA VL+ M
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILID---ALCKEGRIL----EALGVLVMMMK 433
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
GV N+ T+N ++ C A +F RM + G P+ + VLI + V E
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ M+ Y + LC + RI + ++M G +PD TY++L+
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 424 KWCAHNRVDKANALFDEAV 442
+C DKA +LF + V
Sbjct: 554 AFCKTQPFDKAISLFRQIV 572
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L + GR + G M + G K D + ++E C A +L
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKR-GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++LI G+C +DEA L +E+ +YN ++D LC
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID---GLCNSG--- 384
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+ S +K+L +M + P +V T+N+LI LCK R +A+ + M + G PN T+
Sbjct: 385 RI-SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ V ++ +RM +G +Y + C E +++A+ +F++M+
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD +Y+ L+ C R+ L DE +G
Sbjct: 504 KNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 9/277 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ G + L F + + G+ D+ + ++ L +NG A L+++
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQ-GYLFDQFTYGTLINGLSKNGQIKAALHLLQE 185
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ + LI G C DG + +A L ++ G L V YN ++D + R
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ E ++L M V + TFN+LI LCK R +A + M + G P
Sbjct: 246 WQ-------EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ L++ V E E+ +RM G +Y + C + +++AM +F
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+++ P +Y+ L+ C R+ L DE
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 10/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
ID L + GR + LG M + G K + + +++ C + A+ + + +
Sbjct: 412 IDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++LI G+C +DEA L +EM +YN ++D + L R
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIP--- 527
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+++L +M +G +V T+N+L+ CK + + AI LF ++ E G P+ T
Sbjct: 528 ----HVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTN 582
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ +L + ++ ++ + + G + + Y + LC +AM + KM+
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMED 642
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ PD+ T+++++ N DKA L +E + G+
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 80/196 (40%), Gaps = 11/196 (5%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
A L + + G++ V +N I++ C++ + K F + A+ L D
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQF------- 161
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
T+ LI+ L K + + A+ L M + PN + LI L + V + +
Sbjct: 162 --TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCS 219
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
++ G + Y + C + R ++ + KM + +PD T+++L+ C
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279
Query: 430 RVDKANALFDEAVRNG 445
R+ +A + + G
Sbjct: 280 RILEAQGVLAMMSKRG 295
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 3/189 (1%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A + ++ G+ ++ TF +LI+ + A L + + G PN TF +I
Sbjct: 74 AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ + + + + GY + Y + L +I+ A+ + ++M+ P
Sbjct: 134 GFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
+ Y L+ C V A L + G+ + Y + +V + ++
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYN---SLIDGCCSVGRWQEVT 250
Query: 474 TLPEKMARK 482
L KM R+
Sbjct: 251 QLLTKMVRE 259
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 56/141 (39%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P F+ L+ + ++ AI LF ++ G P+ TF +LI + +
Sbjct: 52 PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ + +GY + + C I +A+ + + G+ D TY L+
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171
Query: 427 AHNRVDKANALFDEAVRNGVE 447
+ ++ A L E ++ V+
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQ 192
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 157/374 (41%), Gaps = 26/374 (6%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
+ + LV L+ A F W + ++H+ G+ + F
Sbjct: 51 IKVSQELVLEVLSRVRNDWEAAFTFFLWAARQPGYAHSVREYHSMISILGKMRKFDTAWV 110
Query: 153 FLVDNKEV------LGPKTLASCIDRLVRA---GRPTQVLGFFERMERDYGFKRDKDSLR 203
+ + + V + P+TL I + GR ++R + D G + +
Sbjct: 111 LIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYKRFKFDMGI----EEFQ 166
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWC-VDGKLDEAKRLAREMYR 261
++ LC AE+L+ +FP + K ++++ GWC + G E++R+ REM +
Sbjct: 167 SLLSALCRYKNVQDAEQLMY-CNKAVFPLNTKSFNIVLNGWCNLIGSPRESERVWREMSK 225
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G V+Y ++ C SK RL + +K+ G+ + + +N +I L
Sbjct: 226 RGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKI-------GIEPDRKVYNAVIHALA 278
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K R +A L M E G PN T+ LIK L +A +V E D M + +
Sbjct: 279 KGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIR 338
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y+ FL L E+ ++ EKM+ G P ++TY +L+ K+C +++ L+DE
Sbjct: 339 TYHAFLRIL---RTGEEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEM 395
Query: 442 VRNGVEVKPKEYRV 455
NG+ Y V
Sbjct: 396 SENGISPDRSSYIV 409
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+V+ ++ SC + AG +VL +++M++ G + D+ V+ L + + A
Sbjct: 231 DVVSYASMMSCYSK---AGSLYRVLRLYKQMKK-IGIEPDRKVYNAVIHALAKGRLVNEA 286
Query: 219 EKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
L+K + + P+ + LIK C K++EAK G F+ + + C
Sbjct: 287 FNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAK--------GAFD------DMLKRC 332
Query: 278 VSKLCRKKDPF----RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
+S R F R E +L M G +T+ +LI C+ R+ E+ KL+
Sbjct: 333 ISPTIRTYHAFLRILRTGEEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLW 392
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
M E G P+ ++++VLI L+ + + MK
Sbjct: 393 DEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMK 431
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 107/243 (44%), Gaps = 15/243 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++I+ +C + A R F++G + +L S LCR K+ +AE+
Sbjct: 132 IMIRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLL---SALCRYKNV----QDAEQ- 183
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRS-EDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
L+ P N ++FN++++ C + S ++ +++ M + G + ++ ++
Sbjct: 184 LMYCNKAVFPLNTKSFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYS 243
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+A + + +MK G +K Y + L + +A ++ + M+ G P+
Sbjct: 244 KAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIV 303
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLP 476
TY+ L+ C +V++A FD+ ++ + + Y R L + G++ L
Sbjct: 304 TYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRIL------RTGEEVFALL 357
Query: 477 EKM 479
EKM
Sbjct: 358 EKM 360
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ ++ ++ R G +V E M+R G K + ++ LC + AE+ +
Sbjct: 726 SYSTVVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 784
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I PD + LI G+C G + A + EM+ + Y I +S C+
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI---ISGFCQ 841
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D EA K+ +M G+ + TF LI+ CK +DA ++ M + GC P
Sbjct: 842 IGDMV----EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 897
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L + + +E++ M G Y + LC IE+A+ +
Sbjct: 898 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 957
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ + G N D+ TY LM +C +DKA + E + G++
Sbjct: 958 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 9/281 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
S I L R + + F M R G D +++ C+ G A K +
Sbjct: 763 GSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 821
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ +I PD +I G+C G + EA +L EM+ G E +V + +++ K K
Sbjct: 822 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D FR+ + M G NV T+ LI LCK + A +L + M + G PN
Sbjct: 882 DAFRVHNH-------MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ ++ L ++ + E +++ ++AG Y + C +++A + ++
Sbjct: 935 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M G P T+++LM +C H ++ L + + G+
Sbjct: 995 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1035
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 133/321 (41%), Gaps = 12/321 (3%)
Query: 139 DYFGRRKDFKAIHDFLVD-NKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGF 195
D F +R D +A F + + + P L + I + G + F M G
Sbjct: 802 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GL 860
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKR 254
+ D + ++ C+ G+ A ++ P+ LI G C +G LD A
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L EM++ G + YN I V+ LC+ + EA K++ + E G+ + T+
Sbjct: 921 LLHEMWKIGLQPNIFTYNSI---VNGLCKSGNI----EEAVKLVGEFEAAGLNADTVTYT 973
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L+ CK + A ++ M G P TF VL+ + +G+++++ M +
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1033
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G A + + + C ++ A ++++ M + G PD +TY+ L+ C + +A
Sbjct: 1034 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 1093
Query: 435 NALFDEAVRNGVEVKPKEYRV 455
LF E G V Y V
Sbjct: 1094 WFLFQEMKGKGFSVSVSTYSV 1114
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 18/274 (6%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+ G A +L+ + + P+ + ++ G C G ++EA +L E G
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
TV Y ++D C+ + +A+++L +M G+ + TFNVL++ C
Sbjct: 965 LNADTVTYTTLMDA---YCKSGEM----DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 1017
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
ED KL M G PN TTF L+K + + M S G K Y
Sbjct: 1018 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 1077
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C +++A +F++MK G + TY +L+ + + +A +FD+ R
Sbjct: 1078 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 1137
Query: 444 NGVEVKPK--EYRVDPRYLKKPIAVKKGKKRETL 475
G+ + ++ D +Y KGK+ +T+
Sbjct: 1138 EGLAADKEIFDFFSDTKY--------KGKRPDTI 1163
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 125/306 (40%), Gaps = 13/306 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G KD +H+ ++ T + ID L + G M + G + + +
Sbjct: 878 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFT 936
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+V LC++G A KLV + A + D L+ +C G++D+A+ + +EM
Sbjct: 937 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996
Query: 261 RGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
G + V +N +++ C+ + + EK+L M G+ N TFN L+
Sbjct: 997 GKGLQPTIVTFNVLMNGFCLHGMLE---------DGEKLLNWMLAKGIAPNATTFNSLVK 1047
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + A ++ M G P+ T+ L+K +A + E + MK G+++
Sbjct: 1048 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 1107
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + ++ +A VF++M+ +G D E +D R D
Sbjct: 1108 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPI 1167
Query: 439 DEAVRN 444
DE + N
Sbjct: 1168 DEIIEN 1173
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D ++ D+ + G L EA+R+ +M G L + N L +SK C K
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT------ 670
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ A V + GV NV ++N++I +C++ R ++A L M G P+ ++ +
Sbjct: 671 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ + + + ++I+ MK G Y + LC I ++ +A F +M G
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDE 440
PD+ Y L+ +C + A+ F E
Sbjct: 791 LPDTVVYTTLIDGFCKRGDIRAASKFFYE 819
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 7/191 (3%)
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
RE G +YN ++ V +L R K EA +LL ME G +V +++ +
Sbjct: 678 REFPEVGVCWNVASYNIVIHFVCQLGRIK-------EAHHLLLLMELKGYTPDVISYSTV 730
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
++ C+ + KL M G PN + +I L + ++ E +E M G
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + C I A F +M + PD TY +++ +C + +A
Sbjct: 791 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 850
Query: 437 LFDEAVRNGVE 447
LF E G+E
Sbjct: 851 LFHEMFCKGLE 861
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK-IRRSEDAIKLFYRMGEWGCHPNET 346
F L EA +V M G+ +V++ NV ++ L K ++ AI +F E G N
Sbjct: 631 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 690
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
++ ++I + Q R+ E ++ M+ GY Y + C +++ + E M
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
K G P+S Y ++ C ++ +A F E +R G+
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 11/286 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S + +G+P + +G F++M R +G + D + +++ LC+NG ++ A K+
Sbjct: 283 SLVHGYCSSGKPKEAIGIFKKMCR-HGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 341
Query: 228 EIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
PD L+ G+ +G L E L M + G +LG +N I+ +K K D
Sbjct: 342 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH-NKVD 400
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
EA V +M G+ ++ + ++ LC R +DA+ F + G PN
Sbjct: 401 ------EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIV 454
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
F LI L + + +E+ M G + + + LC R+ +A ++F+ M
Sbjct: 455 VFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 514
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
G P++ TY+ L+ +C ++D+A L V NG VKP +
Sbjct: 515 VRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG--VKPSD 558
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 30/315 (9%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTA 226
+ I+ L+R G+ + F+ M D G D + ++ L + A ++ +
Sbjct: 213 TVINGLLREGQLDKAYSLFDAM-LDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVK 271
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD + L+ G+C GK EA + ++M R G E V Y ++D + K + +
Sbjct: 272 NGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTE 331
Query: 287 PFRL-----------DSEAEKVLLD-----------------MEYNGVPRNVETFNVLIS 318
++ DS LL M G+ FN+++
Sbjct: 332 ARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMG 391
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
K + ++A+ +F M + G +P+ + ++ L A RV + + +KS G A
Sbjct: 392 AYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAP 451
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ + LC ++ ++ + +M G D+ ++ +M C RV +A LF
Sbjct: 452 NIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLF 511
Query: 439 DEAVRNGVEVKPKEY 453
D VR G+E Y
Sbjct: 512 DLMVRIGIEPNTNTY 526
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 123/306 (40%), Gaps = 40/306 (13%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI--FPDD 233
GR ++ RM + G K D S ++++ LC++ + A L+ A+ P D
Sbjct: 149 GGRAMRMDIVLRRMP-ELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLD 207
Query: 234 KIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL----------- 281
+ +I G +G+LD+A L M G V Y+ I+ +SK
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 267
Query: 282 ---------------------CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
C P EA + M +GV +V T+ L+ L
Sbjct: 268 RMVKNGVMPDCIMYTSLVHGYCSSGKP----KEAIGIFKKMCRHGVEPDVVTYTALMDYL 323
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK +S +A K+F + + G P+ TT+ L+ + E +++D M G +G
Sbjct: 324 CKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGH 383
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + ++++A+ VF M+ G NPD Y ++ C RVD A + F+
Sbjct: 384 HIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNS 443
Query: 441 AVRNGV 446
G+
Sbjct: 444 LKSEGL 449
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 110/259 (42%), Gaps = 29/259 (11%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRA 176
FN + A + DE L F++ R++ N +++ T+ +D L A
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNM--RQQGL---------NPDIVNYGTV---LDILCTA 431
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKI 235
GR L F ++ + G + ++ LC E+L + + I D
Sbjct: 432 GRVDDALSQFNSLKSE-GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIF 490
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS--- 292
+ ++ C G++ EAK L M R G E T YN ++D + LD
Sbjct: 491 FNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLID----------GYCLDGKMD 540
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA K+L M +NGV + T+N +I+ + R ED + L M G +P T+ +L+
Sbjct: 541 EAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLL 600
Query: 353 KSLYQAARVGEGDEMIDRM 371
+ L+QA R E+ RM
Sbjct: 601 QGLFQAGRTVAAKELYLRM 619
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 238 LLIKGWCVDGKLDEAKRLAREM--YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+L+KG C D +A L M ++G L VAY + ++ L R+ +LD +A
Sbjct: 176 ILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV---INGLLREG---QLD-KAY 228
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+ M G +V T++ +IS L K + + A ++F RM + G P+ + L+
Sbjct: 229 SLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGY 288
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + E + +M G Y + LC + +A +F+ + GH PDS
Sbjct: 289 CSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDS 348
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
TY L+ + + + + L D ++ G+++
Sbjct: 349 TTYGTLLHGYATEGALVEMHDLLDLMMKKGMQL 381
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 7/180 (3%)
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG--CHPNETTFLVLIKS 354
VL M G ++ ++ +L+ LC + S+ A+ L + M + C + + +I
Sbjct: 158 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 217
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + ++ + + D M G + Y ++ L + +++A VF +M +G PD
Sbjct: 218 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 277
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
Y L+ +C+ + +A +F + R+GVE Y YL K GK E
Sbjct: 278 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYL-----CKNGKSTEA 332
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 194/473 (41%), Gaps = 42/473 (8%)
Query: 4 STSLLLGRLLLQQPPH-RFISPQSTYFSRFSPT--------HYLNFLSKPFSSKPTSNPK 54
+T+LL L ++PPH R S S+ S + H N P + + S+P
Sbjct: 11 NTTLLYVFLTTRKPPHNRHFSAVSSAESWLAVQGNPLIKWPHNPNLAPSPSADQQNSSPT 70
Query: 55 TIDDPDQVIARSLSGELLENLEADP---LPISQRLHLIFSHVTPTPSLVQSTLNFSPEAG 111
+ +P+ + L N+ DP L S R L + + P L+QS + +
Sbjct: 71 SNSNPNYHQNDFFT---LCNILKDPKIQLGPSLRTALDRTGIEPELGLIQSVFDHFDSSP 127
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD------NKEVLGPKT 165
+ + W + F + + ++ G+ ++F + L+D +++ T
Sbjct: 128 KLLHSVFLWAEKKPGFQSSAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGDLVSSDT 187
Query: 166 LASCIDRLVRAGRPTQVLGFFE---RMERDYGFKRDKDSLRLVVEKLCENGYASYA---- 218
A I R RAG + FE ++ + + ++++ LC+ G+ A
Sbjct: 188 FAILIRRYTRAGMSEAAIRTFEYASSLDLIHNSEAGTSLFEILLDSLCKEGHVRVATDYF 247
Query: 219 -EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
K+ KD P +I ++L+ GW KL A+RL EM + + V Y +++
Sbjct: 248 DRKVEKDPC--WVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEG 305
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF--YR 335
S++ R + L E M+ G+ N +N +I L + R ++ + + +
Sbjct: 306 YSRMRRVERAIELVDE-------MKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFF 358
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
+ E G P +T+ L+K +A + +++ M S Y F +
Sbjct: 359 LCEEG--PTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRK 416
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
IE+ M+++ KM G+ PD TY LL+ C R+D A + E G ++
Sbjct: 417 IEEGMNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMRARGCDM 469
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 147/314 (46%), Gaps = 16/314 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
G+R++ K + L++ E +G + T CI L R G+ + +RM+ D G
Sbjct: 240 GKRRNIKTVMG-LLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDD-GCGP 297
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL-LIKGWCVDGKLDEAKRLA 256
D + ++++ LC A L + DK+ + L+ + G LD+ +++
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM G+ V + +++ + K R + F L L M GV N+ T+N L
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDL-------LDTMRKQGVLPNLHTYNTL 410
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
IS L + R +DA+ LF M G P T+++LI ++ G+ E ++MK+ G
Sbjct: 411 ISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGI 470
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
A L L + R+ +A ++F ++K+ G PDS TY+++M + +VD+A
Sbjct: 471 APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIK 530
Query: 437 LFDEAVRNGVEVKP 450
L E + V+ +P
Sbjct: 531 LLSEMSK--VQCEP 542
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 9/277 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVK 223
T + I L+RA R L F ME G + + L+++ ++G+ A E K
Sbjct: 406 TYNTLISGLLRANRLDDALDLFSNME-SLGVEPTAYTYILLIDYHGKSGHPGKALETFEK 464
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A I P+ C+ + G+L EAK + E+ G +V YN ++ C SK+ +
Sbjct: 465 MKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQ 524
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +L SE KV + +V N LI L K R E+A ++F RM E P
Sbjct: 525 VDEAIKLLSEMSKVQCE-------PDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAP 577
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ +L+ L + ++ + ++ + M G + + L LC + ++ A+ +F
Sbjct: 578 TVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMF 637
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
KM T PD T++ ++ + N++ A LF +
Sbjct: 638 YKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQ 674
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 11/277 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IF 230
L AG +L F ER+ +D L +++ LC++ S A + E +
Sbjct: 730 LTEAGTEKAIL-FGERLVCR-AICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVK 787
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P K+ +LLI G+ ++ A L EM G T YN ++D K + + F L
Sbjct: 788 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
E M G N T+N++ISNL K R + A+ L+Y + P TF
Sbjct: 848 YDE-------MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGP 900
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI L ++ R+ + EM D M G Y + + ++ A F++M +G
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PD ++Y +L+ C RVD A F++ + G++
Sbjct: 961 IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD 997
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 16/287 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
L I L + + + F + ++ G K L+++ E A L ++
Sbjct: 756 VLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEE 815
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + LI GK++E L EM G + T+ YN + +S L +
Sbjct: 816 MKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMV---ISNLVK 872
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVE----TFNVLISNLCKIRRSEDAIKLFYRMGEW 339
RLD +D+ YN V + TF LI L K R +DA ++F M +
Sbjct: 873 SN---RLDKA-----MDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHY 924
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
GC PN + +L+ + V E RM G K Y + LC R++ A
Sbjct: 925 GCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDA 984
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ FEK+K G +PD Y+L++ R ++A +LF E G+
Sbjct: 985 LHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGI 1031
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 11/297 (3%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWC 244
E+M R+ GF + S ++ L ++G+ A ++ + +E + P K L+
Sbjct: 182 LEKM-REAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASG 240
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
+ L EM G Y C+ L R ++D EA +++ M+ +
Sbjct: 241 KRRNIKTVMGLLEEMESMGLRPNIYTYTI---CIRVLGRDG---KID-EAYRIMKRMDDD 293
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +V T+ VLI LC R+ +DA+ LF +M P++ T++ L+ + +
Sbjct: 294 GCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKV 353
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+++ M++ GYA + + LC RI +A + + M+ G P+ TY+ L++
Sbjct: 354 EKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISG 413
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
NR+D A LF GVE Y + Y K + GK ET + AR
Sbjct: 414 LLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGK--SGHPGKALETFEKMKAR 468
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV--SKLCRKKDPF--RLDSE 293
++ K + G L +A +M GF L +YN ++ + S C++ R+ SE
Sbjct: 164 IIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSE 223
Query: 294 AEK------------------------VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
K +L +ME G+ N+ T+ + I L + + ++A
Sbjct: 224 GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA 283
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
++ RM + GC P+ T+ VLI +L A ++ + + +MKS+ + K Y L +
Sbjct: 284 YRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK 343
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+++ ++ +M+ DG+ PD T+ +L+ C R+++A L D + GV
Sbjct: 344 FSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGV 400
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 7/210 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ +++I +LD+A L + G F + ++D + K R D
Sbjct: 858 PNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDD---- 913
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A ++ M + G N +N+L++ K+ + A + F RM + G P+ ++ +
Sbjct: 914 ---AHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ L A RV + +++K AG Y + L +R E+A+S+F +M+ G
Sbjct: 971 LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
PD TY+ L+ +++A +++E
Sbjct: 1031 IVPDLYTYNSLILNLGIVGMIEEAGKIYEE 1060
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 123/284 (43%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID ++G+ ++ ++ M G K + + +V+ L ++ A L +
Sbjct: 827 TYNSLIDAHGKSGKINELFDLYDEM-LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYN 885
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ F P LI G G+LD+A + M G + YN +++ KL
Sbjct: 886 LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D+ E M G+ +++++ +L+ LC R +DA+ F ++ + G P
Sbjct: 946 ------VDTACE-FFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDP 998
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + ++I L ++ R E + M++ G Y + L + IE+A ++
Sbjct: 999 DLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIY 1058
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
E+++ G P+ TY+ L+ + + A ++ + + G +
Sbjct: 1059 EELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCD 1102
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 133/324 (41%), Gaps = 43/324 (13%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L N E LG + T ID ++G P + L FE+M + G + + + L
Sbjct: 426 LFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKM-KARGIAPNIVACNASLYSL 484
Query: 210 CENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
E G A+ + + ++ + PD ++++K + G++DEA +L EM + E
Sbjct: 485 AEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDV 544
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLL----------------------------D 300
+ N ++D + K R ++ +++ E++ L
Sbjct: 545 IVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFES 604
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M +G N TFN L+ LCK + A+K+FY+M C P+ TF +I + +
Sbjct: 605 MNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQ 664
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTD-GHNPDSE 416
+ + +MK + + D+ T L G+ +IE A + E G N D
Sbjct: 665 IKNAIWLFHQMKK----LLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRS 720
Query: 417 TYDLLMTKWCAHNRVDKANALFDE 440
++ +M +KA LF E
Sbjct: 721 FWEDVMGGILTEAGTEKA-ILFGE 743
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T ID L+++GR F+ M YG + + ++V + G+ A +
Sbjct: 895 PCTFGPLIDGLLKSGRLDDAHEMFDGMVH-YGCRPNSAIYNILVNGYGKLGHVDTACEFF 953
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
K E I PD K +L+ C+ G++D+A ++ + G + VAYN +++ + +
Sbjct: 954 KRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRS 1013
Query: 282 CRKKDPFRL----------------------------DSEAEKVLLDMEYNGVPRNVETF 313
R ++ L EA K+ ++++ G+ NV T+
Sbjct: 1014 QRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTY 1073
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
N LI SE A ++ +M GC PN TF
Sbjct: 1074 NALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
GV ++ +N+LI ++ E A LF M GC P+ T+ LI + ++ ++ E
Sbjct: 785 GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINEL 844
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ D M + G Y ++ L R+++AM ++ + + +P T+ L+
Sbjct: 845 FDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDG 904
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
R+D A+ +FD V G Y +
Sbjct: 905 LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNI 935
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 17/243 (6%)
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----AYN 272
+ E+LV I DD + +IK C K A+ + + + ELG YN
Sbjct: 741 FGERLV---CRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTK---ELGVKPTLKVYN 794
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++D ++ + + L E M+ G + T+N LI K + + L
Sbjct: 795 LLIDGFLEVHNVEVAWNLFEE-------MKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
+ M GC PN T+ ++I +L ++ R+ + ++ + S ++ + + L
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 907
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
R++ A +F+ M G P+S Y++L+ + VD A F V+ G+ K
Sbjct: 908 SGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKS 967
Query: 453 YRV 455
Y +
Sbjct: 968 YTI 970
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 67/161 (41%)
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
E V ET N ++ L RR ED +F M N T+L++ KSL+ +
Sbjct: 116 ELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGL 175
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ +++M+ AG+ + Y + L ++A+ V+ +M ++G P +T+ L
Sbjct: 176 RQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSAL 235
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
M + L +E G+ Y + R L +
Sbjct: 236 MVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGR 276
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ L ++G+ + LGF ++ME+ G + + +++ C G A + ++
Sbjct: 174 INSLSKSGKANEALGFLKQMEK-VGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG 232
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ L+ G+C +++EA +L E R G V + I +S LCR P
Sbjct: 233 CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTI---ISGLCRAGRPL 289
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A+++ + +G N+ T+ VL+ LCK E+A LF M PN +
Sbjct: 290 ----AAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIY 345
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI SL + ++ +G E+ R+ G Y + LC I +A +F KM+
Sbjct: 346 TILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEE 405
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
DG PD Y++++ + H A L +E V G
Sbjct: 406 DGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRG 442
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 9/300 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFP 231
+VR G V+ + +E G ++D SL +++ C + L K + P
Sbjct: 72 IVRMGHYETVVYLSKEIEF-LGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEP 130
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
L+ G C++GK+D+ L +M G + YN I++ +SK + +
Sbjct: 131 SIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFL 190
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ EKV G NV ++ LI C + ++A +F M GC PN T+ L
Sbjct: 191 KQMEKV-------GCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSL 243
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ + R+ E +++D G + ++ LC R A +F + GH
Sbjct: 244 MNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH 303
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
P+ TY +L+ C H +++A ALF E R+ V+ Y + L K +K GK+
Sbjct: 304 TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKE 363
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 14/244 (5%)
Query: 216 SYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
+YA L E I P+ ++L+ G+C +GK+++AK + M + + V YN +
Sbjct: 253 NYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSL 312
Query: 275 LD---CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+D ++K+ + KD F DS A GV NV+ + +++ CKI+ ++AI
Sbjct: 313 MDGYCSINKVNKAKDIF--DSMAS--------GGVIANVQIYTTMVNGFCKIKMVDEAIN 362
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
LF M PN T+ LI L + R+ +++D M G Y L LC
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALC 422
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+++A+++ +K G PD TY +L+ C R++ A +F++ + G +
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482
Query: 452 EYRV 455
Y V
Sbjct: 483 AYTV 486
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I + + F +M+++ + + ++V+ C+ G + A+ ++
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKE-NINPNVYTFNILVDGFCKEGKVNDAKVVLAI 296
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++I PD + L+ G+C K+++AK + M GG Y + V+ C+
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTM---VNGFCK 353
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ EA + +M + NV T++ LI LCK+ R A+KL M + G P
Sbjct: 354 ----IKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPP 409
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ ++ +L + V + ++ +K G Y + LC R+E A +VF
Sbjct: 410 NIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVF 469
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E + G+N D Y +++ +C DKA AL + NG K Y +
Sbjct: 470 EDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYEL 521
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 11/292 (3%)
Query: 158 KEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
KE + P T +D + G+ M +D K D + +++ C
Sbjct: 264 KENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD-DIKPDVVTYNSLMDGYCSINKV 322
Query: 216 SYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
+ A+ + A+ + + +I ++ G+C +DEA L EM V Y+ +
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSL 382
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+D + KL R +L E M G P N+ T++ ++ LCK + AI L
Sbjct: 383 IDGLCKLGRIFYALKLVDE-------MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLT 435
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+ + G P+ T+ +LIK L Q+ R+ + + + + GY + Y + C
Sbjct: 436 NLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKG 495
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++A+++ KM+ +G P+++TY+L++ + D A L E + G+
Sbjct: 496 FFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 30/300 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ LV+A + L ++ME + G + D + +++ + G S + + +
Sbjct: 68 LSSLVKAKHHSTALSLHQQMELN-GIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKG 126
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + LIKG C+ G + +A ++ GF L V+Y +++ + K+ R
Sbjct: 127 YHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 186
Query: 289 RLDSEAEKVLLD---MEYNGVPRN-------------------------VETFNVLISNL 320
+L + L+ + YN + N V T+N LIS
Sbjct: 187 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGF 246
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ + AI LF +M + +PN TF +L+ + +V + ++ M
Sbjct: 247 SAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDV 306
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C I ++ +A +F+ M + G + + Y ++ +C VD+A LF+E
Sbjct: 307 VTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEE 366
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME NG+ + TFN+LI+ ++ + + +F ++ + G HP TF LIK L
Sbjct: 87 MELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGH 146
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + D++ + G+ + + Y + LC + RI A+ + +++ P++ Y++
Sbjct: 147 IHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 206
Query: 421 LMTKWCAHNRVDKANALFDEAV 442
++ C V+ A L+ + V
Sbjct: 207 IIDNMCKAKLVNDAFDLYSQMV 228
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 85/202 (42%), Gaps = 9/202 (4%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L ++M G E +N +++C S+L L+S + + + G
Sbjct: 80 ALSLHQQMELNGIESDFFTFNILINCFSQL-------GLNSLSFSIFAKILKKGYHPTAI 132
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
TFN LI LC A+ ++ G H ++ ++ LI L + R+ +++ R+
Sbjct: 133 TFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV 192
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
Y + +C + + A ++ +M PD TY+ L++ + A +++
Sbjct: 193 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKL 252
Query: 432 DKANALFDEAVRNGVEVKPKEY 453
+ A LF++ + + P Y
Sbjct: 253 NYAIDLFNKMKKE--NINPNVY 272
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDK 234
+G+P + +G F++M R +G + D + +++ LC+NG ++ A K+ PD
Sbjct: 290 SGKPKEAIGIFKKMCR-HGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDST 348
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
L+ G+ +G L E L M + G +LG +N I+ +K K D EA
Sbjct: 349 TYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH-NKVD------EA 401
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
V +M G+ ++ + ++ LC R +DA+ F + G PN F LI
Sbjct: 402 LLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHG 461
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + + +E+ M G + + + LC R+ +A ++F+ M G P+
Sbjct: 462 LCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPN 521
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ TY+ L+ +C ++D+A L V NGV+ Y
Sbjct: 522 TNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTY 560
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 121/304 (39%), Gaps = 39/304 (12%)
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI--FPDDKI 235
R + + R + G K D S ++++ LC++ + A L+ A+ P D +
Sbjct: 149 RTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVV 208
Query: 236 C-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL------------- 281
+I G +G+LD+A L M G V Y+ I+ +SK
Sbjct: 209 AYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM 268
Query: 282 -------------------CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
C P EA + M +GV +V T+ L+ LCK
Sbjct: 269 VKNGVMPDCIMYTSLVHGYCSSGKP----KEAIGIFKKMCRHGVEPDVVTYTALMDYLCK 324
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+S +A K+F + + G P+ TT+ L+ + E +++D M G +G
Sbjct: 325 NGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 384
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + ++++A+ VF M+ G NPD Y ++ C RVD A + F+
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 444
Query: 443 RNGV 446
G+
Sbjct: 445 SEGL 448
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 110/259 (42%), Gaps = 29/259 (11%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRA 176
FN + A + DE L F++ R++ N +++ T+ +D L A
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNM--RQQGL---------NPDIVNYGTV---LDILCTA 430
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKI 235
GR L F ++ + G + ++ LC E+L + + I D
Sbjct: 431 GRVDDALSQFNSLKSE-GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIF 489
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS--- 292
+ ++ C G++ EAK L M R G E T YN ++D + LD
Sbjct: 490 FNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLID----------GYCLDGKMD 539
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA K+L M +NGV + T+N +I+ + R ED + L M G +P T+ +L+
Sbjct: 540 EAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLL 599
Query: 353 KSLYQAARVGEGDEMIDRM 371
+ L+QA R E+ RM
Sbjct: 600 QGLFQAGRTVAAKELYLRM 618
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 238 LLIKGWCVDGKLDEAKRLAREM--YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+L+KG C D +A L M ++G L VAY + ++ L R+ +LD +A
Sbjct: 175 ILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV---INGLLREG---QLD-KAY 227
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+ M G +V T++ +IS L K + + A ++F RM + G P+ + L+
Sbjct: 228 SLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGY 287
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + E + +M G Y + LC + +A +F+ + GH PDS
Sbjct: 288 CSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDS 347
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
TY L+ + + + + L D ++ G+++
Sbjct: 348 TTYGTLLHGYATEGALVEMHDLLDLMMKKGMQL 380
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 13/230 (5%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+LD A + G + + ++ +L LC ++ R + VL M G
Sbjct: 113 GRLDLAFATVGRVITTGLRMSPILFSPLL---KGLCDRR---RTSDAMDIVLRRMPELGC 166
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG--CHPNETTFLVLIKSLYQAARVGEG 364
++ ++ +L+ LC + S+ A+ L + M + C + + +I L + ++ +
Sbjct: 167 KPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKA 226
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ D M G + Y ++ L + +++A VF +M +G PD Y L+
Sbjct: 227 YSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHG 286
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
+C+ + +A +F + R+GVE Y YL K GK E
Sbjct: 287 YCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYL-----CKNGKSTEA 331
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 8/248 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
G +K + ++V C G A K+++ T N + P ++L+ G+C DGK+DEA
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
R+ EM + V YN ++D S+ +R SE ++ +M+ GV N T
Sbjct: 338 FRIRDEMEKMNVLPDVVTYNTLIDGCSQ-------WRDSSEVYSLIEEMDKKGVKCNAVT 390
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N+++ +CK +A +M E G P+ T+ LI + +A ++G+ M+D M
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMT 450
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S G I L LC +++++A ++ G+ D +Y +L+ + + D
Sbjct: 451 SKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGD 510
Query: 433 KANALFDE 440
+A L+DE
Sbjct: 511 RALNLWDE 518
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVK 223
T + ID + ++V E M++ G K + + ++++ +C+ G + A L K
Sbjct: 355 TYNTLIDGCSQWRDSSEVYSLIEEMDKK-GVKCNAVTYNIILKWMCKKGNMTEATTTLDK 413
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + PD + LI +C GK+ +A R+ EM G ++ T N IL C LC
Sbjct: 414 MEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHC---LCV 470
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+K +LD EA +L G + ++ +LI K + + A+ L+ M E P
Sbjct: 471 EK---KLD-EAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMP 526
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +I L Q+ +V + + ++ M G + Y + C +E+A
Sbjct: 527 STITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFH 586
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+M + PD T ++L+ C ++KA LF+ V G ++ Y
Sbjct: 587 NEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTY 636
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 29/260 (11%)
Query: 218 AEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A +++KD+ + P+ ++LI G+C++ K+ +A +M G TV+YN ILD
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256
Query: 277 CVSK--LCRKKDPFRLD--------------------------SEAEKVLLDMEYNGVPR 308
+ K L ++ LD EA KV+ M N +
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V T+N+L++ C + ++A ++ M + P+ T+ LI Q E +I
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M G Y L +C + +A + +KM+ +G +PD TY+ L+ +C
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436
Query: 429 NRVDKANALFDEAVRNGVEV 448
++ KA + DE G+++
Sbjct: 437 GKMGKAFRMMDEMTSKGLKI 456
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 8/265 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLD 250
++G D S +++ L + A L+ D ++ + P+ ++L+ G+C G L
Sbjct: 241 EFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLK 300
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA ++ M R YN +++ + + FR+ E EK+ N +P +V
Sbjct: 301 EATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKM------NVLP-DV 353
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N LI + R S + L M + G N T+ +++K + + + E +D+
Sbjct: 354 VTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDK 413
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ G + Y + C ++ +A + ++M + G D+ T + ++ C +
Sbjct: 414 MEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKK 473
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+D+A L A + G + Y +
Sbjct: 474 LDEAYNLLCSASKRGYILDEVSYGI 498
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 205 VVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
V+ LC++ A +KL + N + PD+ +++I G+C++G +++A + EM
Sbjct: 534 VIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENL 593
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F+ N +L LCR+ + +A K+ + G +V T+N +IS+LCK
Sbjct: 594 FKPDVYTCNILL---RGLCREG----MLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKE 646
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA------ 377
+ E+A L M P++ T+ V+I +L A R+ E +E +M +G
Sbjct: 647 GKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLK 706
Query: 378 IGK---------KDYYEF--------LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+GK ++++F + LC + + AM +F ++ +G + TY
Sbjct: 707 LGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLN 766
Query: 421 LM 422
LM
Sbjct: 767 LM 768
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I +AG+ + + M G K D +L ++ LC A L+
Sbjct: 425 TYNTLIGAYCKAGKMGKAFRMMDEMTSK-GLKIDTWTLNTILHCLCVEKKLDEAYNLLCS 483
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + D++ +LI G+ D K D A L EM T+ YN + + LC+
Sbjct: 484 ASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSV---IGGLCQ 540
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ ++D +K L +M NG+ + T+N++I C E A + M E P
Sbjct: 541 SR---KVDQAIDK-LNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKP 596
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T +L++ L + + + ++ + + S G I Y ++ LC + E A +
Sbjct: 597 DVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLL 656
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M+ PD TY +++ R+ +A + V +G+
Sbjct: 657 TEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 40/215 (18%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A +VL D GV N +FN+LI C + +DA+ +M E+GC P+ ++ ++
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDY-------------------YEFLTR----- 389
+L + + E +++ MKS G + K Y E +TR
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316
Query: 390 -----------LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
C +I++A + ++M+ PD TY+ L+ + +L
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376
Query: 439 DEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
+E + GV+ Y + +++ KKG E
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWM-----CKKGNMTE 406
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK-DTANE 228
+D L + G+ T+ F+ M R G K D +++ G S + N
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRK-GIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNG 374
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ I +++ + + EA + +M + G V Y ++D + KL R D
Sbjct: 375 ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDD-- 432
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
AE M GV N+ F L+ LC I + E A +LF+ M G HPN F
Sbjct: 433 -----AELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFF 487
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ +L RV + +ID M+ G Y + C + + ++A + + M +
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P+ TY+ L+ +C R+D A ++F E + NG+
Sbjct: 548 VGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGI 585
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 14/250 (5%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREM 259
S V+ G A L D ++ P + + ++I G C +D A+ + ++M
Sbjct: 206 SYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQM 265
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G V Y C++ + + K+ R+ L +M +G+ + T+ +L+
Sbjct: 266 IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRM-------LKEMSAHGLEPDCFTYGLLLDY 318
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LCK + +A KLF M G P+ + + +++ + E +D M G +
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGIS-- 376
Query: 380 KKDYYEFLTRLCGIER---IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
++Y F C + I +AM +F KM+ G +P+ Y L+ C RVD A
Sbjct: 377 -PNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435
Query: 437 LFDEAVRNGV 446
F++ + GV
Sbjct: 436 KFNQMINEGV 445
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFEL---GTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
L+KG+C + + +EA L M G V+YN +++ F + + +
Sbjct: 172 LLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN----------GFFTEGQVD 221
Query: 296 K---VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
K + LDM G+P NV T+ ++I LCK + + A +F +M + G PN T+ LI
Sbjct: 222 KAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLI 281
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ E M+ M + G Y L LC + +A +F+ M G
Sbjct: 282 HGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIK 341
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
PD Y +++ + + + ++ D V NG + P Y
Sbjct: 342 PDVSIYGIILHGYATKGALSEMHSFLDLMVGNG--ISPNHY 380
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 17/278 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID+ +AG FFE + + G + ++ LC G A++L+ D +
Sbjct: 462 IDKWEKAGEL-----FFEMVNQ--GIHPNVVFFNTIMCNLCTEGRVMKAQRLI-DLMERV 513
Query: 230 F--PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
PD + LI+G C+ GK DEA +L M G + YN +L CR
Sbjct: 514 GTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLL---HGYCRDG-- 568
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
R+D +A V +M NG+ V T+N ++ L K RR +A +L+ M G + T
Sbjct: 569 -RID-DAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYT 626
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +++ L + V E +M + S + + + L R E AM++F +
Sbjct: 627 YNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATIS 686
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+G PD TY L+ +++ + +F E ++G
Sbjct: 687 ANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 14/296 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLL 239
+ + F +M R G + + +++ LC+ G AE NE + P+ + L
Sbjct: 397 EAMDIFNKM-RQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSL 455
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ G C K ++A L EM G V +N I+ LC + + A++++
Sbjct: 456 VYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIM---CNLCTEGRVMK----AQRLID 508
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
ME G ++ ++N LI C + ++++A KL M G PNE T+ L+ +
Sbjct: 509 LMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDG 568
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ + + M S G Y L L R +A ++ M T G TY+
Sbjct: 569 RIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYN 628
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
+++ +N VD+A +F ++V + + L +K G+K + +
Sbjct: 629 IILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGAL-----LKDGRKEDAM 679
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 136/309 (44%), Gaps = 18/309 (5%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFP 231
L GR + + MER G + D S ++ C G A KL+ + + P
Sbjct: 494 LCTEGRVMKAQRLIDLMER-VGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
++ + L+ G+C DG++D+A + +EM G V YN IL + K R
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKT-------RRF 605
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
SEA+++ L+M +G ++ T+N++++ L K ++A+K+F + + TF ++
Sbjct: 606 SEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIM 665
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I +L + R + + + + G Y L +E+ +F +M+ G
Sbjct: 666 IGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGC 725
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV--KKG 469
P+S + L+ + + +A A ++ K + ++ I++ ++
Sbjct: 726 APNSLMLNFLVRRLLLRGDISRAGAYLS-------KIDEKNFSLEASTTSMLISLFSREE 778
Query: 470 KKRETLPEK 478
+ ++LPEK
Sbjct: 779 HQAKSLPEK 787
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 13/292 (4%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A+ ID L + GR F +M + G + +V LC A +L +
Sbjct: 418 ATLIDALCKLGRVDDAELKFNQMINE-GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMV 476
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL--DCVSKLCR 283
N+ I P+ + ++ C +G++ +A+RL M R G ++YN ++ C L
Sbjct: 477 NQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHC---LVG 533
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K D EA K+L M G+ N T+N L+ C+ R +DA +F M G P
Sbjct: 534 KTD------EASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITP 587
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ ++ L++ R E E+ M ++G Y L L +++A+ +F
Sbjct: 588 VVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMF 647
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ + + D T+++++ R + A LF NG+ YR+
Sbjct: 648 QSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRL 699
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 17/269 (6%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++++D +++ PD +L+ +C G+L+ + + G+ + V L +
Sbjct: 81 RMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRL--LK 138
Query: 280 KLCRKKDPFRLDSEAEKVLL-DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC K EA VLL M G NV ++N L+ C R+E+A++L + M +
Sbjct: 139 GLCDAKRV----GEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMAD 194
Query: 339 W---GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
C PN ++ +I + +V + + M G Y + LC +
Sbjct: 195 GQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQV 254
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+++A VF++M G P+ TY L+ + + + + + E +G+E Y +
Sbjct: 255 VDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGL 314
Query: 456 DPRYLKKPIAVKKGKKRET--LPEKMARK 482
YL KKGK E L + M RK
Sbjct: 315 LLDYL-----CKKGKCTEARKLFDSMIRK 338
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 187/472 (39%), Gaps = 51/472 (10%)
Query: 13 LLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELL 72
LL +P H +S S + R T ++P + ++P + + + SL LL
Sbjct: 3 LLLKPKHH-LSSASLFLRRLCTTEPF---TEPITEPAPASPPPLTHEETKLVDSLQAALL 58
Query: 73 ENLEADP---LPISQRLHLIFSHVTPTPSLVQST----LNFS--------------PEAG 111
++ A P LP S + S T L+ ST L F PEA
Sbjct: 59 DHRRAHPATPLPASPPFDPLPSLSTTLTGLLPSTPSPHLTFHVFGRLLALRRGIPFPEA- 117
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGP---KTLAS 168
+ FNH L S E + D + F L + ++ P + + +
Sbjct: 118 --LAFFNHVLPSLPTDS-LPELYASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILA 174
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
I R VRAG ++ F ME G D L ++ L + AS A+ L +
Sbjct: 175 LIRRYVRAGMSSEASDLFRSMEEYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSV 234
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + L+ WC G LD+A+++ EM + G Y ++D + + +
Sbjct: 235 FTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVP--- 291
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A+++L M +G P N TFN ++ K RSE +++ +M + GC P+ T+
Sbjct: 292 ----RAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITY 347
Query: 349 LVLIKSLYQAARVGEGDEMID-------RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
L+++ G+G +D +M + G + L + + ++ A
Sbjct: 348 NFLMET-----HCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHK 402
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
++E+M+ P+ TY+LLM + +D + + GVE Y
Sbjct: 403 LYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNTY 454
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 127/285 (44%), Gaps = 37/285 (12%)
Query: 194 GFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G D + +++E C+ GY E + A P++ ++L+ G C +G +D+A
Sbjct: 37 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 96
Query: 253 KRLAREMYRGGFELGTVAYNCIL----------------------DC----------VSK 280
L R + G + TV YN +L +C +
Sbjct: 97 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 156
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LCRK L +A ++L M +G N+ T+N +I+ LC+ R + A+ L +M +G
Sbjct: 157 LCRKG----LLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 212
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P+ T+ L+K L AAR + +E++D M G + + LC + A+
Sbjct: 213 CKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 272
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
VF++M G P+S TY +++ ++D+A LF+E G
Sbjct: 273 EVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 8/242 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LCE G A ++ D PD ++L++ C +A L M G
Sbjct: 13 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 72
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
V YN ++D +C + D +A ++L ++ +G + +N ++ LC
Sbjct: 73 CTPNNVTYNVLMD---GMCGEGDV----DDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 125
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R DA +L M C PNE TF V+I SL + + + +++++M G Y
Sbjct: 126 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 185
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC ++ AM + KMK+ G PD TY+ L+ C+ R A L D +
Sbjct: 186 NAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQ 245
Query: 444 NG 445
NG
Sbjct: 246 NG 247
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 9/230 (3%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDE 251
+G K + V++ LC A++LV + E P ++ +++I C G L +
Sbjct: 106 HGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQ 165
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A +L +M + G V YN I ++ LC +++ A +L M+ G ++
Sbjct: 166 AIQLLEKMSKHGCTANIVTYNAI---INGLCEQRNV----DGAMGLLSKMKSYGCKPDIV 218
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N L+ LC R DA +L M + GC P+ TF LI L Q + + E+ +M
Sbjct: 219 TYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 278
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
G Y ++ L +++QA+ +F +M G NPD + Y LL
Sbjct: 279 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLL 327
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 10/270 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
I L R G Q + E+M + +G + + ++ LCE A L+ K +
Sbjct: 154 IYSLCRKGLLQQAIQLLEKMSK-HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 212
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + L+KG C + +A+ L M + G V +N + + LC+K
Sbjct: 213 CKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTL---IGFLCQKG--- 266
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L +A +V M G N T++ +IS L K + + A++LF MG G +P++ +
Sbjct: 267 -LMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-Y 324
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L + L + E + + +++ +G + Y L LC + E A+ + M +
Sbjct: 325 QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVS 384
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
G PD TY +L+ +++A L
Sbjct: 385 SGCMPDDLTYVILIEGLAYEGYLNEARELL 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
V N T+N LI LC+ + DA+ + M GC P+ T+ +L+++ + +
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
E+ID M++ G Y + +CG ++ A+ + + + G P + Y+ ++
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 426 CAHNRVDKANALFDEAVR 443
C+ R A+ L E +R
Sbjct: 123 CSAERWGDADELVTEMLR 140
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIK 241
+G +M + YG K D + +++ LC AE+L+ + T N PD+ + LI
Sbjct: 202 MGLLSKM-KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIG 260
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE-------- 293
C G + +A + ++M G ++ Y+ I+ ++K + L +E
Sbjct: 261 FLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP 320
Query: 294 -------------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
A + + ++ +G+ + +N ++ LC+ ++E AI +
Sbjct: 321 DKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMA 380
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
M GC P++ T+++LI+ L + E E++ ++ S
Sbjct: 381 YMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS 419
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 3/142 (2%)
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T+ LI +L + +V + ++D M G A Y L C QAM
Sbjct: 4 QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ + M+ +G P++ TY++LM C VD A L +G + Y LK
Sbjct: 64 LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT---VLK 120
Query: 462 KPIAVKKGKKRETLPEKMARKR 483
+ ++ + L +M R+
Sbjct: 121 GLCSAERWGDADELVTEMLREN 142
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 144/348 (41%), Gaps = 58/348 (16%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
TL + I L G+ + L F +++ GF+ D+ S ++ +C+ G A +L++
Sbjct: 135 TLTTLIKGLCLKGQVKKALHFHDKLLAQ-GFRLDQVSYGTLINGVCKIGETRAAIQLLRR 193
Query: 224 -------------DTANEIFPDDKI----CDL------------------LIKGWCVDGK 248
+T + K+ C+L +I G+C+ GK
Sbjct: 194 IDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGK 253
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDC----------------VSKLCRKKDPFR--- 289
L EA EM YN ++D + K C K +
Sbjct: 254 LTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNT 313
Query: 290 -LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+D A+ V + GV +V ++N++I+ LCKI+R E+A+ L+ M + PN T+
Sbjct: 314 LIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTY 373
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L ++ R+ ++ID M G+ Y + LC ++++A+++ KMK
Sbjct: 374 NSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKD 433
Query: 409 DGHNPDSETYDLLMTK-WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G PD T ++L+ C R+ A LF + + G Y +
Sbjct: 434 QGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNI 481
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 129/311 (41%), Gaps = 37/311 (11%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-------------------ERDYGFKRDKDSLRLV 205
T ++ I G+ T+ LGF M ++ K K+ L ++
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI 299
Query: 206 VEKLCENGYASYAEKLVKDTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLA 256
V+ + +Y L+ A +F PD +++I C +++EA L
Sbjct: 300 VKTCLKPNVITY-NTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLY 358
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+EM++ TV YN ++D + K R S A ++ +M G NV T+N L
Sbjct: 359 KEMHQKNMVPNTVTYNSLIDGLCKSGRI-------SYAWDLIDEMHDRGHHANVITYNSL 411
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY-QAARVGEGDEMIDRMKSAG 375
I+ LCK + + AI L +M + G P+ T +L+ L + R+ + + G
Sbjct: 412 INGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKG 471
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y Y + C +++A ++ KM+ G +P++ T+ +++ DKA
Sbjct: 472 YHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAE 531
Query: 436 ALFDEAVRNGV 446
L E + G+
Sbjct: 532 KLLCEMIARGL 542
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 64/153 (41%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+E + + T N+LI+ C + + A + ++ +WG P+ T LIK L +
Sbjct: 89 LELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQ 148
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + D++ + G+ + + Y + +C I A+ + ++ P+ Y+
Sbjct: 149 VKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNT 208
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
++ C V +A LF E G+ Y
Sbjct: 209 IIDCLCKRKLVSEACNLFSEMSVKGISANVVTY 241
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 7/215 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD ++LI +C G+++ A + ++ + G++ TV + + LC K
Sbjct: 94 IQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTL---IKGLCLKGQVK 150
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +K+L G + ++ LI+ +CKI + AI+L R+ PN +
Sbjct: 151 KALHFHDKLLAQ----GFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMY 206
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L + V E + M G + Y + C + ++ +A+ +M
Sbjct: 207 NTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVL 266
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
NPD Y+ L+ +V +A + V+
Sbjct: 267 KAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVK 301
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 10/303 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VD V G + + +V + Q FF E D S +V++ CE G
Sbjct: 120 MVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN--ESKIKVDLDVYSFGIVIKGCCEAG 177
Query: 214 YASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ L+ + F P+ I LI G C G++++AK L EM + G Y
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYT 237
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ + K KK F + + M+ +GV N+ T+N +++ CK R++DA KL
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEK-------MQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKL 290
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M E G N T+ LI L + + E ++++D+MKS G Y + CG
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCG 350
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+ ++ +A+S+ +K+ G +P TY++L++ +C A + E G++
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKIT 410
Query: 453 YRV 455
Y +
Sbjct: 411 YTI 413
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 133/300 (44%), Gaps = 12/300 (4%)
Query: 152 DFLVDNKEV-LGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
D LV+ +E P + + ID + G + F M + +G ++ + +++
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGK-FGLVANEWTYTVLIHG 242
Query: 209 LCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
L +NG E K + +FP+ + ++ C DG+ +A +L EM G
Sbjct: 243 LFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCN 302
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V YN + + LCR+ +EA KV+ M+ +G+ N+ T+N LI C + +
Sbjct: 303 IVTYNTL---IGGLCREMKA----NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A+ L + G P+ T+ +L+ + +++ M+ G K Y +
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILI 415
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++ +E+A+ + M+ G PD TY +L+ +C ++++A+ LF V +E
Sbjct: 416 DTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLE 475
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +++ + GR F+ M R+ G + + ++ LC A+ A K++
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEM-RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQ 328
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ I P+ + LI G+C GKL +A L R++ G V YN + VS C+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL---VSGFCK 385
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K D S A KV+ +ME G+ + T+ +LI ++ E AI+L M E G P
Sbjct: 386 KGDT----SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTP 441
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ VLI ++ E + M + K Y + C +A+ +F
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLF 501
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+M+ P+ +Y ++ C + +A L ++ + G++
Sbjct: 502 REMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGID 545
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 18/319 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T I L + G Q +E+M+ D G + + V+ + C++G A KL +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQED-GVFPNLYTYNCVMNQHCKDGRTKDAFKLFDE 293
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--C-VSK 280
+ + + LI G C + K +EA ++ +M G + YN ++D C V K
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
L +A + D++ G+ ++ T+N+L+S CK + A K+ M E G
Sbjct: 354 L----------GKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P++ T+ +LI + + + + ++ M+ G Y + C ++ +A
Sbjct: 404 IKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
+F+ M P+ Y+ ++ +C +A LF E + YR L
Sbjct: 464 RLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVL 523
Query: 461 KKPIAVKKGKKRETLPEKM 479
K +K K+ E L EKM
Sbjct: 524 CKE---RKSKEAEGLVEKM 539
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 12/222 (5%)
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
++ +++I + LD + EM GF G+ +N +L V +R +E
Sbjct: 95 RLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE 154
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+ K+ +D++ V +F ++I C+ E + L + E+G PN + LI
Sbjct: 155 S-KIKVDLD-------VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLID 206
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC--GIERIEQAMSVFEKMKTDGH 411
+ + + ++ M G + Y + L GI++ Q ++EKM+ DG
Sbjct: 207 GCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK--QGFEMYEKMQEDGV 264
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ TY+ +M + C R A LFDE GV Y
Sbjct: 265 FPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTY 306
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +LI G+C+ G+++EA RL + M E V YN + V C++ +R
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTM---VLGYCKEGSSYR- 496
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
A ++ +ME +P NV ++ +I LCK R+S++A L +M + G P+++
Sbjct: 497 ---ALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDS 549
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 9/316 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T A+ + RL AG L R + D + +V C+ G + A ++ +
Sbjct: 4 TTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDE 63
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P++ L+ G+ G+ ++ L EM RGG E YNC+ + + CR
Sbjct: 64 MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCL---IGEWCR 120
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ R A + +M G+ RNV ++N LI+ LC+ + DA KL M G P
Sbjct: 121 TGEFER----ARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP 176
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF +L+ +A ++ ++MK+AG+ Y + C + +A
Sbjct: 177 SIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRAL 236
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
MK G P TY +L+ + N + KA + + G+EV Y V R L
Sbjct: 237 SDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCME 296
Query: 464 IAVKKGKKR-ETLPEK 478
+K +K +++ EK
Sbjct: 297 GNMKDARKLFQSMGEK 312
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 12/306 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKI 235
G+ + FE M R G + + + ++ + C G A L + I +
Sbjct: 87 GQREKGFALFEEMRRG-GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVS 145
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ LI G C GKL +A +L M G + +N ++D K + S A
Sbjct: 146 YNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM-------SNAL 198
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
M+ G + T+N+LI+ C+ R A + M E G P + T+ +LI S
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ +G+ E++ M+ AG + Y + LC ++ A +F+ M G P +
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
YD+++ + KA L E + G+ Y + R L K K ++ E L
Sbjct: 319 VIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKD---DKCQEAEAL 375
Query: 476 PEKMAR 481
+ M R
Sbjct: 376 LDDMVR 381
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 110/287 (38%), Gaps = 70/287 (24%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G R+ S ++ LC +G A KL+ E P +LL+ G+ GK+ A
Sbjct: 138 GIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNA 197
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR----------------------- 289
+M GF+ V YN + ++ CR +D R
Sbjct: 198 LPFFNQMKAAGFQPSAVTYNML---IAGFCRARDMTRANRALSDMKERGLEPTKVTYTIL 254
Query: 290 LDS--------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+DS +A ++L ME G+ + T+ VL+ LC +DA KLF MGE G
Sbjct: 255 IDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGV 314
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ + ++I GY Y +A+
Sbjct: 315 EPSNVIYDMMIY---------------------GYGREGSSY--------------KALK 339
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+ +M+ G P+S +Y L + C ++ +A AL D+ VR G++
Sbjct: 340 LIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQT 386
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 162/389 (41%), Gaps = 38/389 (9%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S + +P +V+ L AG F W + ++ H+ + + + +K +
Sbjct: 59 SGLRVSPEVVEDVLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLM 118
Query: 151 HDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
D + + K++L +T + + RA + + + F ME+ Y + + ++
Sbjct: 119 WDLINAMMKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEK-YDLPPNLVAFNGLLSA 177
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
LC++ A+++ ++ + PD K +L++GW + L +A+ + REM G
Sbjct: 178 LCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDI 237
Query: 269 VAYNCILDCVSK---------LCRKKDP--------------------FRLDSEAEKVLL 299
V Y+ ++D + K + R DP RL+ EA L
Sbjct: 238 VTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLE-EAVDTFL 296
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+ME +G+ +V FN LI CK R ++ ++ M G PN + ++++ L
Sbjct: 297 EMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDR- 355
Query: 360 RVGEGDEMIDRM-KSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSET 417
GE DE D K D Y + ++ C + +E A V++ M+ G P T
Sbjct: 356 --GEKDEAFDVFRKMIKVCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 413
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ +L+ C KA L +E + G+
Sbjct: 414 FSVLINGLCEEPNTQKACVLLEEMIEMGI 442
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 19/241 (7%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++++ + K+DEA M + VA+N +L S LC+ K+ +A+++
Sbjct: 138 IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLL---SALCKSKNV----RKAQEI 190
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M P + +T+++L+ K A ++F M + G P+ T+ +++ L +
Sbjct: 191 FENMRDRFTP-DSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCK 249
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKD--YYEFLTRLCGIE-RIEQAMSVFEKMKTDGHNPD 414
A RV DE + ++S +I K Y L G E R+E+A+ F +M+ G D
Sbjct: 250 AGRV---DEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKAD 306
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
++ L+ +C NR+ + E GV K + R+L + +G+K E
Sbjct: 307 VAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHL-----IDRGEKDEA 361
Query: 475 L 475
Sbjct: 362 F 362
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKIC 236
R + + F MER G K D ++ C+ +++K+ ++ + P+ K C
Sbjct: 287 RLEEAVDTFLEMERS-GMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSC 345
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++++ G+ DEA + R+M + E Y + + C KK+ A+K
Sbjct: 346 NIILRHLIDRGEKDEAFDVFRKMIKVC-EPDADTYTMM---IKMFCEKKEM----ETADK 397
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
V M GV ++ TF+VLI+ LC+ ++ A L M E G P+ TF
Sbjct: 398 VWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATF 449
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 158/395 (40%), Gaps = 83/395 (21%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + D + V+ +A R G+ + ERM RD G + +
Sbjct: 195 GRSMDALGVLDSMPTMNLVVCNTVVAG----FCREGQVDEAERLVERM-RDEGLAPNVVT 249
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEI-----FPDDKICDLLIKGWCVDGKLDEAKRLA 256
+ LC+ G A ++ D + PD D+++ G+C G +DEA+ L
Sbjct: 250 FNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLV 309
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M GGF +YN L S L R + EA+++L +M + GV N T+N++
Sbjct: 310 DIMRCGGFLRRVESYNRWL---SGLVRNG----MVGEAQELLREMAHEGVQPNSYTYNII 362
Query: 317 ISNLCK------IRRSEDAIK-----------------------------LFYRMGEWGC 341
+ LCK +R+ ED +K + M + GC
Sbjct: 363 VDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGC 422
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T+ VL++SL++A R+ E + +++RM GY++ + LC +++ AM
Sbjct: 423 APNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMD 482
Query: 402 VFEKMKTDGH-----------------------NPDSETYDLLMTKWCAHNRVDKANALF 438
+ + M +G PD TY L++ C R D+A
Sbjct: 483 IVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKL 542
Query: 439 DEAVRNGVEVKPKEYRVDP------RYLKKPIAVK 467
E + G ++ P D ++ K +AVK
Sbjct: 543 LEMI--GKDISPDSVLYDTFIHGYCKHGKTSLAVK 575
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 136/322 (42%), Gaps = 26/322 (8%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ D + + DF+ T S + G + M + G + +
Sbjct: 370 GKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQK-GCAPNSFT 428
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++++ L + G + AE+L++ + + + D C+++I G C + KLD A + M+
Sbjct: 429 YNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMW 488
Query: 261 -RGGFELGTVAY-------------NCILD------CVSKLCRKKDPFRLDSEAEKVLLD 300
G LG + Y C+ D VS LC++ R D EA+K LL+
Sbjct: 489 NEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEG---RFD-EAKKKLLE 544
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + + ++ I CK ++ A+K+ M + GC P+ T+ +LI +
Sbjct: 545 MIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHN 604
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E ++I MK G Y + C + +AM + ++M + P+ +++L
Sbjct: 605 SDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFEL 664
Query: 421 LMTKWCAHNRVDKANALFDEAV 442
L+ +C + A +FD ++
Sbjct: 665 LIKAFCKTSDFSAAQRVFDASL 686
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 8/249 (3%)
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+C+ ++ G+C +G++DEA+RL M G V +N + + K R D +R+ ++
Sbjct: 214 VCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDM 273
Query: 295 EKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+ + G+PR + TF+V++S C+ ++A L M G ++ +
Sbjct: 274 Q----EKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLS 329
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L + VGE E++ M G Y + LC + V + +K+ P
Sbjct: 330 GLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTP 389
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
D TY L+ +C+ AN + DE + G Y V + L K + + E
Sbjct: 390 DVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEA---E 446
Query: 474 TLPEKMARK 482
L E+M+ K
Sbjct: 447 RLLERMSEK 455
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 25/244 (10%)
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCIL 275
Y + L+ A ++F + +L++ C G+++ A+R+ M R F G +A
Sbjct: 138 YKDLLLSGAAPDVFTRN----ILLQALCAAGRMELARRVFDAMPERNEFSFGILARG--- 190
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
CR +A VL M N+ N +++ C+ + ++A +L R
Sbjct: 191 -----YCRAGRSM----DALGVLDSMP----TMNLVVCNTVVAGFCREGQVDEAERLVER 237
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG-YAIGKKDYYEF---LTRLC 391
M + G PN TF I +L +A RV + + + M+ + + D F L+ C
Sbjct: 238 MRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFC 297
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+++A + + M+ G E+Y+ ++ + V +A L E GV+
Sbjct: 298 EAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSY 357
Query: 452 EYRV 455
Y +
Sbjct: 358 TYNI 361
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
E + D+ +G +V T N+L+ LC R E A ++F M E NE +F +L +
Sbjct: 135 ESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPE----RNEFSFGILARG 190
Query: 355 LYQAAR-------------------------------VGEGDEMIDRMKSAGYAIGKKDY 383
+A R V E + +++RM+ G A +
Sbjct: 191 YCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTF 250
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGH----NPDSETYDLLMTKWCAHNRVDKANALFD 439
++ LC R+ A +F M+ PD T+D++++ +C VD+A L D
Sbjct: 251 NARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVD 310
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 183/424 (43%), Gaps = 31/424 (7%)
Query: 30 SRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSL-SGELLENLEADPLPISQRLHL 88
SR+ ++ L+ F S +NP +++D +V+ R + S ++NL+ L
Sbjct: 12 SRYISKTPISLLANLFFS---TNPTSLNDDVEVVYRIITSSSSVQNLKQS---------L 59
Query: 89 IFSHVTPTPSLVQSTLN---FSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRK 145
+ + + L+ L FS L F ++ F HT +L GR +
Sbjct: 60 TSTGIFLSNDLIDKVLKRVRFSHGNPLQALEFFYYTDNRKGFYHTPYSLDTILYILGRSR 119
Query: 146 DFKAIHDFLVDNKE----VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
F I D L+ K ++ P+T+ + R+ + Q + F + ++ + D
Sbjct: 120 KFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAKLCSVRQTVESFRKFKK-FVSVLDTTC 178
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ LC+ + A + E P+ + ++L+ GW + +EA+ EM
Sbjct: 179 FNALLRTLCQEKSMTDARNVYHRLKKEFKPNLQTFNILLSGW---KQSEEAELFFEEMRE 235
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G + V+YN ++D C+ ++ +A KV+ M + +V T+ +I L
Sbjct: 236 LGIKPDVVSYNSLIDVY---CKDREM----EKAYKVVEKMREEDISPDVITYTSIIGGLG 288
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ + + A + M E+GC+P+ + +I++ A R+G+ ++D M S G +
Sbjct: 289 LVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNAT 348
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y F + + S++ +M G P++++ L+ + H +V+ A L+++
Sbjct: 349 TYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDM 408
Query: 442 VRNG 445
V G
Sbjct: 409 VEKG 412
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
L T +N +L LC++K ++A V ++ P N++TFN+L+S ++
Sbjct: 174 LDTTCFNALL---RTLCQEKSM----TDARNVYHRLKKEFKP-NLQTFNILLSGW---KQ 222
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
SE+A F M E G P+ ++ LI + + + +++++M+ + Y
Sbjct: 223 SEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTS 282
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ L + + ++A + +MK G PD Y+ ++ +C R+ A+ L DE G
Sbjct: 283 IIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKG 342
Query: 446 VEVKPKEYRV 455
+ Y +
Sbjct: 343 LSPNATTYNL 352
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 15/287 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF D+ + ++ LC G A +L + A I PD + + L+KG C+ G + A
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ EM G YN + ++ LC+ + S+A V+ D G +V T
Sbjct: 380 LQVMNEMAEEGCHPDIQTYNIV---INGLCKMGNI----SDATVVMNDAIMKGYLPDVFT 432
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI CK + + A++L RM E+G P+ T+ ++ L +A +V E +E M
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + C ++E+A V KM +G +PD+ +++ L+ +C + ++
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKM 479
A LF +++ K Y I GK + EK+
Sbjct: 553 GAYLLFQ-------KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 592
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ L G + L F + G K D +V+ LC G +A +++ +
Sbjct: 327 TYCSLINGLCAEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNE 385
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A E PD + +++I G C G + +A + + G+ +N ++D C+
Sbjct: 386 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID---GYCK 442
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +LDS + V EY P + T+N +++ LCK + + + F M GCHP
Sbjct: 443 R---LKLDSALQLVERMWEYGIAPDTI-TYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 498
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +LI++ ++ ++ E ++I +M G + + C +E A +F
Sbjct: 499 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLF 558
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+K++ G++ ++T++ L+ + + A +FDE + G YRV
Sbjct: 559 QKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 610
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 107/285 (37%), Gaps = 42/285 (14%)
Query: 206 VEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LCE G A +LV PD + LI+G C EA R M G
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
YN I+D K+ + EA ++L D + G + T+ LI+ LC
Sbjct: 288 PDDFTYNTIIDGYCKI-------SMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 340
Query: 326 SEDAIKLF-----------------------------------YRMGEWGCHPNETTFLV 350
E A++LF M E GCHP+ T+ +
Sbjct: 341 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 400
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L + + + +++ GY + + C +++ A+ + E+M G
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD+ TY+ ++ C +V++ N F E + G P Y +
Sbjct: 461 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 505
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 32/327 (9%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S + L G L M + G D + +V+ LC+ G S A ++ D
Sbjct: 365 SLVKGLCLQGLILHALQVMNEMAEE-GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM 423
Query: 228 EIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK- 285
+ + PD + LI G+C KLD A +L M+ G T+ YN +L+ + K +
Sbjct: 424 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 483
Query: 286 ---------------DPFRLD------------SEAEKVLLDMEYNGVPRNVETFNVLIS 318
+P + EA KV++ M G+ + +FN LI
Sbjct: 484 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 543
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C+ E A LF ++ E G TF LI + + +++ D M S G+
Sbjct: 544 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 603
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A +M G P T+ ++ ++RV +A +
Sbjct: 604 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 663
Query: 439 DEAVRNGV--EVKPKEYRVDPRYLKKP 463
V+ GV EV D + + P
Sbjct: 664 HIMVKIGVVPEVVDTILNADKKEIAAP 690
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 9/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV L +G+ A +L + +FP+ + ++ C G + EA L ++ + G
Sbjct: 157 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 216
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ YN + LC RL EA +++ M VP +V T+N LI LCK
Sbjct: 217 MSINLFTYNIW---IRGLCEAG---RL-PEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKK 268
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
++A+ RM GC P++ T+ +I + + V E E++ G+ + Y
Sbjct: 269 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 328
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC +E+A+ +F + + G PD Y+ L+ C + A + +E
Sbjct: 329 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 388
Query: 444 NGVEVKPKEYRV 455
G + Y +
Sbjct: 389 EGCHPDIQTYNI 400
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++ I+G C G+L EA RL M R V YN + + LC+K P EA
Sbjct: 225 NIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTL---IRGLCKKSMP----QEAMH 276
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
L M G + T+N +I CKI ++A +L G P++ T+ LI L
Sbjct: 277 YLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC 336
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
V E+ + ++ G Y + LC I A+ V +M +G +PD +
Sbjct: 337 AEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 396
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY++++ C + A + ++A+ G
Sbjct: 397 TYNIVINGLCKMGNISDATVVMNDAIMKG 425
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 19/256 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + + L ERM +YG D + V+ LC+ G + V +
Sbjct: 432 TFNTLIDGYCKRLKLDSALQLVERM-WEYGIAPDTITYNSVLNGLCKAGKVNE----VNE 486
Query: 225 TANEIF-----PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
T E+ P+ ++LI+ +C K++EA ++ +M + G V++N + +
Sbjct: 487 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL---IY 543
Query: 280 KLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
CR D E +L +E G +TFN LI A K+F M
Sbjct: 544 GFCRNGD-----LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 598
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G + T+ VLI + A V + M G+ + + L R+ Q
Sbjct: 599 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 658
Query: 399 AMSVFEKMKTDGHNPD 414
A+ + M G P+
Sbjct: 659 AVGIIHIMVKIGVVPE 674
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 128/308 (41%), Gaps = 9/308 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L AG + + F M+ D G D +V LC G AE L+ D
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQAD-GCAPDPHVYATMVHGLCGAGRTREAETLLSD 202
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E F P+ + + LI G+C G L+ A + M G Y + +S C+
Sbjct: 203 AMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYT---ELISGFCK 259
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +LD A + M G+ NV T+ LI C + + A +L M G P
Sbjct: 260 SR---KLD-RAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVP 315
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
NE T VLI +L + RVGE ++ + G + + Y + LC R A +
Sbjct: 316 NEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLM 375
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
+ + + G PD+ TY L+ C + +A + D+ + GV+ P Y + L +
Sbjct: 376 QTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVRE 435
Query: 464 IAVKKGKK 471
+ KK
Sbjct: 436 VGADGSKK 443
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI +C+ G L +KR + R GF + AY V CR L + A ++
Sbjct: 78 LINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSF---VVGYCRAG----LLAHACRLF 130
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ M G R T+ L+ LC +A+ +F M GC P+ + ++ L A
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R E + ++ + G+ Y + C + +E A+ VFE+M +G +P+ TY
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
L++ +C ++D+A LF V G+
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGL 278
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 131/300 (43%), Gaps = 9/300 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I ++ + + + F RM D G + + +++ C +G A +L++
Sbjct: 248 RTYTELISGFCKSRKLDRAMMLFSRM-VDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQ 306
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
N + P++ C +LI C ++ EA+ L + + G ++ + Y ++D + K
Sbjct: 307 SMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG 366
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R + A++++ + G + T++ LI LC+ + +A+ + M E G
Sbjct: 367 RF-------AAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQ 419
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ ++I L + +++D+M +AG Y F+ C R+E A +
Sbjct: 420 PSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHM 479
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
M G P+ TY+ L+ + +A + F V NG + + Y V R L K
Sbjct: 480 MLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 51/309 (16%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G K ++ +++ LC+ G + A++L++ ++ F PD LI G C +L EA
Sbjct: 347 GIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEA 406
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCR-------------------KKDPFRLD-- 291
+ +M G + V Y I+D +L R K D F
Sbjct: 407 MLVLDDMMEKGVQPSPVTYTIIID---ELVREVGADGSKKILDKMIAAGIKPDVFTYTIF 463
Query: 292 ----------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+AE ++L M +GV N+ T+N LI + + A F M GC
Sbjct: 464 VRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGC 523
Query: 342 HPNETTFLVLIK----------------SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
PNE ++ VL++ S+++ A + +++ M Y
Sbjct: 524 KPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNC 583
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
FLT LC ++R+++A + +M++ P + Y ++ C + +A D V++G
Sbjct: 584 FLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSG 643
Query: 446 VEVKPKEYR 454
+ + YR
Sbjct: 644 YIPQLESYR 652
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/342 (19%), Positives = 131/342 (38%), Gaps = 46/342 (13%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + LV V T +S ID L R ++ + + M + G + +
Sbjct: 366 GRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDM-MEKGVQPSPVT 424
Query: 202 LRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++++L A ++K++ K A I PD + ++ +C +G++++A+ + M
Sbjct: 425 YTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMV 484
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRL-----------DSEAEKVLLDM-----EYN 304
G V YN ++ + L F + E+ VLL + N
Sbjct: 485 DHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSN 544
Query: 305 GVPRN----------------------------VETFNVLISNLCKIRRSEDAIKLFYRM 336
+P N ++ +N +++LC++ R ++A L M
Sbjct: 545 NIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEM 604
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
P+E + +I + + E +D M +GY + Y ++ LC I
Sbjct: 605 QSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSI 664
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ A VF M + +N + + +L+ V + ++L
Sbjct: 665 QTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLL 706
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR +D + + +VD+ T + I G +Q F+ M + G K +++S
Sbjct: 471 GRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVAN-GCKPNEES 529
Query: 202 ----LRLVVEKLCENGYAS------------YAEKLVKDTANEIFPDD-KICDLLIKGWC 244
LRL+++K N + Y L+++ P + I + + C
Sbjct: 530 YTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLC 589
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
+LDEAK L EM Y I+ C +L ++ +EA + M +
Sbjct: 590 RVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRL-------KMLTEALTFVDSMVKS 642
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +E++ +IS+LC+ + A ++F M + E + +LI L Q V E
Sbjct: 643 GYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAEC 702
Query: 365 DEMIDRMKSAGY 376
++ M+ Y
Sbjct: 703 SSLLSVMEEKNY 714
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 174/418 (41%), Gaps = 36/418 (8%)
Query: 72 LENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTD 131
L N++ P IS + S V P + +N G+ +L F+ +++ +
Sbjct: 68 LVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS-GVSKILKLGYQP 126
Query: 132 ETLSFFT-----DYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFF 186
T++ T G+ K+ HD ++ L + I+ + + G +
Sbjct: 127 NTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLL 186
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
R+ER + + + +++++LC++ A L + + I PD +L+ G+C+
Sbjct: 187 RRIER-WSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCI 245
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK-------------------- 285
G+L+ A L EM Y ++D + K + K
Sbjct: 246 VGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVV 305
Query: 286 -----DPFRLDSE---AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
D + L +E A++V M GV +V ++++I+ LCKI+R ++A+ LF +
Sbjct: 306 YSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIH 365
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ P+ T+ LI L ++ R+ ++ D M G Y + LC ++
Sbjct: 366 QKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLD 425
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+A+++F KMK P+ T+ +L+ C R+ A F + + G + + Y V
Sbjct: 426 RAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTV 483
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 7/222 (3%)
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
T + PD ++I G C ++DEA L E+++ TV Y ++DC+ K R
Sbjct: 330 TQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRI 389
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ L E +LD G P +V T+N LI LCK + AI LF +M + PN
Sbjct: 390 SYVWDLFDE----MLD---RGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPN 442
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
TF +L+ L + R+ E + + GY + + Y + LC +++A+++
Sbjct: 443 VYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQS 502
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M+ +G D+ T+++++ + + DKA L E + G+
Sbjct: 503 RMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 108/300 (36%), Gaps = 79/300 (26%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
LV R + +++ME + D +L +++ C G A V + P
Sbjct: 68 LVNVKRYPTAISLYKQMELS-EVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQP 126
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ + L+KG C++GK+ EA R ++ GF L ++Y
Sbjct: 127 NTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYG------------------- 167
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+LI+ +CKI + AI+L R+ W PN + ++
Sbjct: 168 -----------------------ILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMI 204
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I RLC +++A ++ +M G
Sbjct: 205 ID-----------------------------------RLCKDTLVDEAYDLYTEMVGKGI 229
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+PD TY +L++ +C ++++A L +E V + Y + L K VK+ +
Sbjct: 230 SPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAEN 289
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 9/282 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ ID L + L F M+ + G + D + ++ LC G S A +L+ D
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+I P+ + LI + +GKL EA++L EM + + V YN + ++ C
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL---INGFCMHD 359
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
RLD EA+++ M +V T+N LI+ CK ++ D ++LF M G N
Sbjct: 360 ---RLD-EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI +QA+ + +M S G Y L LC ++E+AM VFE
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++ PD TY+++ C +V+ LF GV+
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 151/353 (42%), Gaps = 14/353 (3%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDF-LVDNKEVLGPK----TLASCIDRLVRAG 177
Q + +T++F T G + KA LV+ V G + T + I+ L + G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKIC 236
P L +ME+ + D V++ LC+ + A L + N+ I PD
Sbjct: 220 EPDLALNLLNKMEKG-KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
LI C G+ +A RL +M V +N ++D +K + EAEK
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL-------IEAEK 331
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+ +M + N+ T+N LI+ C R ++A ++F M C P+ T+ LI
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+A +V +G E+ M G Y + + A VF++M +DG +P+
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
TY+ L+ C + +++KA +F+ ++ +E Y + + K V+ G
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 136/326 (41%), Gaps = 46/326 (14%)
Query: 127 FSHTDETLSFFTDY---------------------FGRRKDFKAIHDFLVDNKEVLGPKT 165
+ H D+ L+ FT+ +GR D + +++ K T
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
S ID + G+ + F+ M +R D +V NG+ + ++L D
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEM-----IQRSIDP-NIVTYNSLINGFCMH-DRL--DE 363
Query: 226 ANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A +IF PD + LI G+C K+ + L R+M R G TV Y +
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL-- 421
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ + D A+ V M +GV N+ T+N L+ LCK + E A+ +F +
Sbjct: 422 -IHGFFQASDC----DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ P+ T+ ++ + + +A +V +G ++ + G Y ++ C
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLM 422
E+A ++F KMK DG PDS TY+ L+
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 7/199 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K D +M G YN +++C LCR+ S A +L M G
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINC---LCRRSQL----SFALAILGKMMKLGYG 132
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ T N L++ C R +A+ L +M E G P+ TF L+ L+Q + E +
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
++RM G Y + LC + A+++ KM+ D Y ++ C
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 428 HNRVDKANALFDEAVRNGV 446
+ VD A LF E G+
Sbjct: 253 YRHVDDALNLFTEMDNKGI 271
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
KLDEA L EM + V ++ +L ++K+ +K D + S EK ME GV
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM-KKFD--LVISFGEK----MEILGVS 97
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N+ T+N++I+ LC+ + A+ + +M + G P+ T L+ R+ E +
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+D+M GY + D F T + G+ + +A+++ E+M G PD TY ++
Sbjct: 158 VDQMVEMGY---QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEY 453
C D A L ++ + +E Y
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 7/206 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I C +L A + +M + G+ V N +L+ C R+ SEA
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN---GFCHGN---RI-SEAVA 156
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
++ M G + TF L+ L + ++ +A+ L RM GC P+ T+ +I L
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ ++++M+ Y + LC ++ A+++F +M G PD
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAV 442
TY L++ C + R A+ L + +
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDML 302
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL 239
T + GFF+ D D+ ++V +++ +G + P+ + L
Sbjct: 420 TLIHGFFQ--------ASDCDNAQMVFKQMVSDG---------------VHPNIMTYNTL 456
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ G C +GKL++A + + + E YN + + + K + +D + L
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL-------FC 509
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+ GV +V +N +IS CK E+A LF +M E G P+ T+ LI++ +
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
E+I M+S +A G Y +T + R+++
Sbjct: 570 DKAASAELIKEMRSCRFA-GDASTYGLVTDMLHDGRLDKG 608
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 15/287 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF D+ + ++ LC G A +L + A I PD + + L+KG C+ G + A
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ EM G YN + ++ LC+ + S+A V+ D G +V T
Sbjct: 381 LQVMNEMAEEGCHPDIQTYNIV---INGLCKMGNI----SDATVVMNDAIMKGYLPDVFT 433
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI CK + + A++L RM E+G P+ T+ ++ L +A +V E +E M
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + C ++E+A V KM +G +PD+ +++ L+ +C + ++
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKM 479
A LF +++ K Y I GK + EK+
Sbjct: 554 GAYLLFQ-------KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 593
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ L G + L F + G K D +V+ LC G +A +++ +
Sbjct: 328 TYCSLINGLCAEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNE 386
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A E PD + +++I G C G + +A + + G+ +N ++D C+
Sbjct: 387 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID---GYCK 443
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +LDS + V EY P + T+N +++ LCK + + + F M GCHP
Sbjct: 444 R---LKLDSALQLVERMWEYGIAPDTI-TYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 499
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +LI++ ++ ++ E ++I +M G + + C +E A +F
Sbjct: 500 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLF 559
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+K++ G++ ++T++ L+ + + A +FDE + G YRV
Sbjct: 560 QKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 611
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 107/285 (37%), Gaps = 42/285 (14%)
Query: 206 VEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LCE G A +LV PD + LI+G C EA R M G
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
YN I+D K+ + EA ++L D + G + T+ LI+ LC
Sbjct: 289 PDDFTYNTIIDGYCKI-------SMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 341
Query: 326 SEDAIKLF-----------------------------------YRMGEWGCHPNETTFLV 350
E A++LF M E GCHP+ T+ +
Sbjct: 342 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 401
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L + + + +++ GY + + C +++ A+ + E+M G
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD+ TY+ ++ C +V++ N F E + G P Y +
Sbjct: 462 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 506
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 32/327 (9%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S + L G L M + G D + +V+ LC+ G S A ++ D
Sbjct: 366 SLVKGLCLQGLILHALQVMNEMAEE-GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM 424
Query: 228 EIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK- 285
+ + PD + LI G+C KLD A +L M+ G T+ YN +L+ + K +
Sbjct: 425 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 484
Query: 286 ---------------DPFRLD------------SEAEKVLLDMEYNGVPRNVETFNVLIS 318
+P + EA KV++ M G+ + +FN LI
Sbjct: 485 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 544
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C+ E A LF ++ E G TF LI + + +++ D M S G+
Sbjct: 545 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 604
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A +M G P T+ ++ ++RV +A +
Sbjct: 605 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 664
Query: 439 DEAVRNGV--EVKPKEYRVDPRYLKKP 463
V+ GV EV D + + P
Sbjct: 665 HIMVKIGVVPEVVDTILNADKKEIAAP 691
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 9/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV L +G+ A +L + +FP+ + ++ C G + EA L ++ + G
Sbjct: 158 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 217
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ YN + LC RL EA +++ M VP +V T+N LI LCK
Sbjct: 218 MSINLFTYNIW---IRGLCEAG---RL-PEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKK 269
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
++A+ RM GC P++ T+ +I + + V E E++ G+ + Y
Sbjct: 270 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 329
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC +E+A+ +F + + G PD Y+ L+ C + A + +E
Sbjct: 330 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 389
Query: 444 NGVEVKPKEYRV 455
G + Y +
Sbjct: 390 EGCHPDIQTYNI 401
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++ I+G C G+L EA RL M R V YN + + LC+K P EA
Sbjct: 226 NIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTL---IRGLCKKSMP----QEAMH 277
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
L M G + T+N +I CKI ++A +L G P++ T+ LI L
Sbjct: 278 YLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC 337
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
V E+ + ++ G Y + LC I A+ V +M +G +PD +
Sbjct: 338 AEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 397
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY++++ C + A + ++A+ G
Sbjct: 398 TYNIVINGLCKMGNISDATVVMNDAIMKG 426
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 19/256 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + + L ERM +YG D + V+ LC+ G + V +
Sbjct: 433 TFNTLIDGYCKRLKLDSALQLVERM-WEYGIAPDTITYNSVLNGLCKAGKVNE----VNE 487
Query: 225 TANEIF-----PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
T E+ P+ ++LI+ +C K++EA ++ +M + G V++N + +
Sbjct: 488 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL---IY 544
Query: 280 KLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
CR D E +L +E G +TFN LI A K+F M
Sbjct: 545 GFCRNGD-----LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 599
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G + T+ VLI + A V + M G+ + + L R+ Q
Sbjct: 600 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 659
Query: 399 AMSVFEKMKTDGHNPD 414
A+ + M G P+
Sbjct: 660 AVGIIHIMVKIGVVPE 675
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 124/257 (48%), Gaps = 16/257 (6%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-----PDDKICDLLIKGWCVDGK 248
G + + + +++ LC G AE ++ IF PD LI G C +G
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEAELIM----GHIFHYGACPDTFTYTSLIIGHCKNGN 252
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
LD A + M + G + +V Y+ + ++ LC + RL+ EA +L +M G+
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSAL---INGLCSEG---RLE-EAMDMLEEMIDKGIEP 305
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V + + I +LC RS +A+KL +M + GC PN T+ LI L + + +
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M + G Y + +L R E A+++FE M + P++ETY++++ +C+
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425
Query: 429 NRVDKANALFDEAVRNG 445
+ KA A+FD+ ++ G
Sbjct: 426 GYIQKATAIFDQMLKAG 442
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 11/285 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I++L GR L FE M + + ++ ++++ C GY A + D
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWM-LSHDSLPNTETYNVIIKGFCSIGYIQKATAIF-D 436
Query: 225 TANEIFPDDKIC--DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ P + +++I + G ++ A RL M G +L T Y ++ S+
Sbjct: 437 QMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGG 496
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ + F L +E M +G+ NV T+N +I+ + + +DA+ LF++M E G
Sbjct: 497 KLEHAFSLFNE-------MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNV 549
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ ++I + R+ E + +M G Y F+ LC R A +
Sbjct: 550 PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKI 609
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
F +MK + P+ TY L+ C + + A L D+ V+
Sbjct: 610 FHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVD 654
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 14/265 (5%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGK 248
YG D + ++ C+NG A +++VKD + P+ LI G C +G+
Sbjct: 231 YGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCD---PNSVTYSALINGLCSEGR 287
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L+EA + EM G E AY + LC D R EA K+L M+ G
Sbjct: 288 LEEAMDMLEEMIDKGIEPTVHAYTIP---IVSLC---DAGR-SCEAVKLLGKMKKRGCGP 340
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV+T+ LIS L + + E AI ++++M G P T+ LI LY R +
Sbjct: 341 NVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIF 400
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M S + Y + C I I++A ++F++M G +P+ TY++++ +
Sbjct: 401 EWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQ 460
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
++ A L + NG+++ Y
Sbjct: 461 GYMNNAMRLLEMMKGNGLKLDTWTY 485
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 29/288 (10%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T A+ I R G+ F M ++G + + ++ NGY + A+ D
Sbjct: 484 TYANLISGFSRGGKLEHAFSLFNEM-VEHGISPNVVTYNAII-----NGYLTVAKV---D 534
Query: 225 TANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A +F P +++I G+ ++ EA+ +M + G + Y +
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
D + K R F++ E +K + P N+ T++ LI LC+ ++EDA +L
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKK------RDYFP-NLCTYSSLIDGLCQEGQAEDAERLL-- 645
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
+ GC PN T+ L++ L R E D++++ MK G ++ Y L C
Sbjct: 646 --DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLE 703
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+E A+ +F+ M T G P Y L+ C N KA +F ++
Sbjct: 704 VESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLK 751
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 132/342 (38%), Gaps = 34/342 (9%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + I ++++ + + +T I G + F++M + G + +
Sbjct: 391 GRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKA-GPSPNVIT 449
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ + GY + A +L++ N + D LI G+ GKL+ A L EM
Sbjct: 450 YNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMV 509
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRL----------------------------DS 292
G V YN I++ + + D L S
Sbjct: 510 EHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRIS 569
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EAE M G+ NV T+ I LCK R+ A K+F+ M + PN T+ LI
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLI 629
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L Q + + + ++D G Y + LCG R +A + E MK G
Sbjct: 630 DGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQ 685
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
P E Y L+ C + V+ A +FD V G + +Y+
Sbjct: 686 PSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYK 727
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 110/273 (40%), Gaps = 20/273 (7%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLI 240
VL FF + R + FK D + S +LV+D P D + L+I
Sbjct: 93 SVLRFFHWVSRTHFFKHDMSC------------FVSMLNRLVRDRL--FVPADNVRILMI 138
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
K +G++ ++ E+ ++ G Y+ S L + F +D V ++
Sbjct: 139 KSCRNEGEVKRVIQVLSEI-NTTYDFGYTLYS-----FSTLLIQLGKFDMDGLGRDVYIE 192
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M +G+ N+ TFN +I LC + ++A + + +G P+ T+ LI +
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ EM DRM G Y + LC R+E+AM + E+M G P Y +
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ C R +A L + + G + Y
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTY 345
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+F+ L+ L K ++ M G PN TF +IK L +V E + ++ +
Sbjct: 169 SFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHI 228
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G Y + C ++ A +F++M DG +P+S TY L+ C+ R+
Sbjct: 229 FHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRL 288
Query: 432 DKANALFDEAVRNGVEVKPKEYRV 455
++A + +E + G+E Y +
Sbjct: 289 EEAMDMLEEMIDKGIEPTVHAYTI 312
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 147/363 (40%), Gaps = 53/363 (14%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNK------EVLGPKTLASCIDRLVRAGRPTQVLGFF 186
T + D +G+ D + + + + + +V+ L +C + GR + +F
Sbjct: 237 TYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKF---GRMEKAYSYF 293
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCV 245
M+R G + + V+ C+ G A KL + P++ L+ G C
Sbjct: 294 GEMKRQ-GVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 352
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G+LD+A L EM G V Y ++D LC++ +EA+ VL ME G
Sbjct: 353 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD---GLCKEGKV----AEADNVLSLMERGG 405
Query: 306 VPRN-----------------------------------VETFNVLISNLCKIRRSEDAI 330
V N V + LI LCK ++ ++A
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAK 465
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
L ++M G PN + ++ +L++A + E ++ ++ +G+ Y + L
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGL 525
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C I +A+S F KM+ G +P+ + Y L+ +C ++KA L +E + G+ +
Sbjct: 526 CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDK 585
Query: 451 KEY 453
Y
Sbjct: 586 VVY 588
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 11/281 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ +V++ LC+ G A L V+ A PD + LI G+ G L+E ++L EM
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM 261
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ G V YN +++C SK R + + E M+ GV NV TF+ +
Sbjct: 262 RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGE-------MKRQGVVANVVTFSTFVDA 314
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
CK ++A+KLF +M G PNE T+ L+ +A R+ + ++D M G
Sbjct: 315 FCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + LC ++ +A +V M+ G + Y L+ +N ++A L +
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434
Query: 440 EAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMA 480
+ G+E+ Y L K V + K +L KMA
Sbjct: 435 QMKNKGMELDVSLYGTLIWGLCKDQKVDEAK---SLLHKMA 472
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 129/322 (40%), Gaps = 9/322 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + D +V V T +D L + G+ + MER G K ++
Sbjct: 354 GRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERG-GVKANELL 412
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ N + A L+ N+ D + LI G C D K+DEAK L +M
Sbjct: 413 YTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMA 472
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G TV Y I+D + K + +SEA +L + +G NV T+ LI L
Sbjct: 473 GCGLRPNTVIYTTIMDALFKAGK-------ESEAVALLHKILDSGFQPNVVTYCALIDGL 525
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK +AI F +M E G PN + LI + + + +++ M G ++ K
Sbjct: 526 CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDK 585
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + ++ A ++ KM G D Y ++ +C N + +A + E
Sbjct: 586 VVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSE 645
Query: 441 AVRNGVEVKPKEYRVDPRYLKK 462
+ G+ Y R +K
Sbjct: 646 MIGTGITPDKTVYNCLIRKYQK 667
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 36/216 (16%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
VP NV TFN++I LCK +A LF RM GC P+ T+ LI + + E +
Sbjct: 197 VP-NVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVE 255
Query: 366 EMIDRMKSAGYA---------------IGKKD--------------------YYEFLTRL 390
+++ M+ +G A G+ + + F+
Sbjct: 256 QLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAF 315
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C +++AM +F +M+ G P+ TY L+ C R+D A L DE V G+
Sbjct: 316 CKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375
Query: 451 KEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRL 486
Y V L K V + +L E+ K L
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANEL 411
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
VP N T N ++ L + R+ +LF + PN TF ++I L + + E
Sbjct: 165 VPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV----PNVFTFNIVIDFLCKEGELVEAR 220
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRL--CG-IERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ RMK+ G + Y + CG +E +EQ +S +M+ G D TY+ L+
Sbjct: 221 ALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVS---EMRKSGCAADVVTYNALI 277
Query: 423 TKWCAHNRVDKANALFDEAVRNGV 446
+ R++KA + F E R GV
Sbjct: 278 NCFSKFGRMEKAYSYFGEMKRQGV 301
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 136/322 (42%), Gaps = 38/322 (11%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T I+ LV+ R + + M D G+ + +++ C G S A ++ D
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMS-DRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG-----TVAYNCILDC- 277
+N I P+ C+ LI+G+C +++ A+ L EM GG + +V + L C
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387
Query: 278 --------------------------VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
VS LC+ SEA ++ + G N
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGK----QSEAIELWYRLLEKGFAANTV 443
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T N LI LC+ E+A KL M E G + ++ LI + + +V EG ++ + M
Sbjct: 444 TSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEM 503
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G Y L LC + +IE+A ++ + K +G+ PD+ TY +++ +C NRV
Sbjct: 504 VRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRV 563
Query: 432 DKANALFDEAVRNGVEVKPKEY 453
++ LF E V +E Y
Sbjct: 564 EEGEKLFQEMVTMKIEQNAVVY 585
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 11/289 (3%)
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
V+ T S I RL R L F E + R+ FK + L L+V LC+NG S A
Sbjct: 369 VINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN--FKPNDGLLTLLVSGLCQNGKQSEA 426
Query: 219 EKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+L + F + + + LI G C G +EA +L +EM G L +++YN ++
Sbjct: 427 IELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILA 486
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
K + ++ F+L E M G+ ++ T+N+L+ LC + + E+A L++
Sbjct: 487 CCKEGKVEEGFKLKEE-------MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ G P+ T+ ++I +A RV EG+++ M + Y + C +
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMR 599
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+A + + M++ G S TY L+ VD AN L DE + G+
Sbjct: 600 EAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGL 648
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ L + G+ ++ + + R+ + GF + + ++ LCE G A KL+K+
Sbjct: 414 VSGLCQNGKQSEAIELWYRL-LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
D I + LI C +GK++E +L EM R G + YN +L + + + ++
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L E +K NG + T+ ++I CK R E+ KLF M N +
Sbjct: 533 GLWHECKK-------NGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVY 585
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI++ + + E + D M+S G Y + L I ++ A + ++M+
Sbjct: 586 GTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRK 645
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+G +P+ Y L+ +C ++ K +++ E N V Y +
Sbjct: 646 EGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 123/302 (40%), Gaps = 14/302 (4%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
LA C + G+ + E M R G + D + +++ LC G A L +
Sbjct: 485 LACC-----KEGKVEEGFKLKEEMVRR-GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHEC 538
Query: 226 A-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
N FPD ++I G+C +++E ++L +EM E V Y ++ +
Sbjct: 539 KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNM 598
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
++ FRL DM G+P+ T++ LI L I + A +L M + G PN
Sbjct: 599 REAFRLRD-------DMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPN 651
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ LI + ++ + D ++ M K Y + C + ++ A +
Sbjct: 652 VVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLN 711
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI 464
+M G PD+ TY+ L +C ++++A + D G+ + Y KP+
Sbjct: 712 EMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPL 771
Query: 465 AV 466
V
Sbjct: 772 TV 773
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FP K C+ L+ ++ + ++ M G ++ +++ R D
Sbjct: 158 LFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAI 217
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L + EKV GV NV T+N +I LCK R ++A + +M + P+ T+
Sbjct: 218 ELFRKMEKV-------GVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTY 270
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VLI L + R E + ++ M GYA Y + C I I A+ + + M +
Sbjct: 271 GVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMIS 330
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+G +P+S T + L+ +C N+++ A L +E + G
Sbjct: 331 NGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 9/283 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
KT + LV+A F+ M G D +V C G A +L +
Sbjct: 163 KTCNFLLSSLVKANEVKMSYQVFDIMCH-CGVTPDVYLFSTMVNAFCTGGRVDDAIELFR 221
Query: 224 DTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ P+ + +I G C +G+LDEA + +M + + V Y +++ + KL
Sbjct: 222 KMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKL- 280
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R D EA +L +M G N +N LI C+I A+++ M G
Sbjct: 281 -----ERFD-EANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGIS 334
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T LI+ ++ ++ + +++ M + G I + + + RLC R + A+
Sbjct: 335 PNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLF 394
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+M P+ LL++ C + + +A L+ + G
Sbjct: 395 IMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + GV +V F+ +++ C R +DAI+LF +M + G PN T+ +I L + R
Sbjct: 188 MCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGR 247
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E + ++M+ Y + L +ER ++A + ++M G+ P++ Y+
Sbjct: 248 LDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNT 307
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
L+ +C + A + D+ + NG+
Sbjct: 308 LIDGYCRIGNISTALQIRDDMISNGI 333
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ +++T N L+S+L K + + ++F M G P+ F ++ + RV +
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E+ +M+ G A Y + LC R+++A EKM+ + P TY +L+
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276
Query: 425 WCAHNRVDKANALFDEAVRNG 445
R D+AN + E G
Sbjct: 277 LVKLERFDEANCILKEMSDRG 297
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+LF + G P+ T L+ SL +A V ++ D M G D Y F T +
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVT---PDVYLFSTMV 204
Query: 391 ---CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
C R++ A+ +F KM+ G P+ TY+ ++ C + R+D+A
Sbjct: 205 NAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEA 251
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 166/413 (40%), Gaps = 53/413 (12%)
Query: 65 RSLSGELLENLEADPLP---------------ISQRLHLIFSHVTPTPSL-----VQSTL 104
RSL LL NL + PL +Q LH + V PSL V S L
Sbjct: 118 RSLHRHLLGNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSAL 177
Query: 105 NFSP--------EAGRAILGF----NHWLTQNANFSHTDE-TLSFFTDYFGRRKDFKAIH 151
SP +A R+I+ NH+ +H + TL+ + F
Sbjct: 178 ARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSP 237
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
D + N + ++ R G + RM++D G + + +V
Sbjct: 238 DAVTYN----------TLLNAHCRKGMLGEARALLARMKKD-GVAPTRPTYNTLVSAYAR 286
Query: 212 NGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTV 269
G+ A K+V+ TAN PD ++L G C GK+DEA RL EM R G L V
Sbjct: 287 LGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVV 346
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
YN + D K CR S+A ++L +M GV + T N++I LCK E A
Sbjct: 347 TYNTLADACFK-CR------CSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGA 399
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ +M + G P+ T+ LI + +A + + ++D M G + L
Sbjct: 400 LGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYN 459
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
LC +R E+A + + G PD +Y +M + + A L+DE +
Sbjct: 460 LCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMI 512
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 13/252 (5%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIF---PDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ L+V C G + A+ L + + F PD + L+ C G L EA+ L
Sbjct: 206 TFNLLVHTHCSKG--TLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 263
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
M + G YN ++ ++L K +A KV+ M NG ++ T+NVL
Sbjct: 264 RMKKDGVAPTRPTYNTLVSAYARLGWIK-------QATKVVEAMTANGFEPDLWTYNVLA 316
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ LC+ + ++A +L M G P+ T+ L + ++ + +++ M+ G
Sbjct: 317 AGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGV 376
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ + LC +E A+ KM DG PD TY+ L+ C + KA
Sbjct: 377 KATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYT 436
Query: 437 LFDEAVRNGVEV 448
L DE VR G+++
Sbjct: 437 LMDEMVRRGLKL 448
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDL 238
+ L E M R+ G K + +V++ LC++G A + A++ + PD +
Sbjct: 362 SDALRLLEEM-REKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNT 420
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI C G + +A L EM R G +L T N +L LC++K R + EA+ +L
Sbjct: 421 LIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVL---YNLCKEK---RYE-EAQGLL 473
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
G + ++ +++ K SE A++L+ M E P+ +T+ LIK L +
Sbjct: 474 QSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRM 533
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E + ++ + G Y + C +E A KM + PD T
Sbjct: 534 GRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTC 593
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ LM C + ++DKA LF+ V G +V Y
Sbjct: 594 NTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITY 628
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 17/276 (6%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLG-FFERMERDYGFKRDKDSLRLVVEKLC 210
D +++ K T + I L R GR + + E ME+ G D + +++ C
Sbjct: 509 DEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEK--GLVPDDTTYNIIIHAYC 566
Query: 211 ENG----YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ G + K+V+ N PD C+ L+ G C++GKLD+A +L G ++
Sbjct: 567 KEGDLENAFQFHNKMVE---NSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKV 623
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+ YN + + +C+ D +D+ A DME G+ + T+NV++S L + R+
Sbjct: 624 DVITYNTL---IQTMCKDGD---VDT-ALHFFADMEARGLQPDAFTYNVVLSALSEAGRT 676
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E+A + +++ E G + +L S A G+ + + + Y +
Sbjct: 677 EEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKL 736
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ LC + ++A ++ ++M G + DS TY LM
Sbjct: 737 VNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLM 772
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 11/227 (4%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PDD +++I +C +G L+ A + +M F+ V N +++ LC
Sbjct: 551 LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMN---GLCLNG--- 604
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+LD +A K+ G +V T+N LI +CK + A+ F M G P+ T+
Sbjct: 605 KLD-KALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTY 663
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
V++ +L +A R E M+ ++ +G + + L + ++ E + +T
Sbjct: 664 NVVLSALSEAGRTEEAQNMLHKLAESGTL--SQSFSSPLLKPSSVDEAESGKDAKTEEET 721
Query: 409 --DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ + SE Y L+ C + +A A+ DE ++ G+ V Y
Sbjct: 722 VENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTY 768
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N TFN+L+ C DA+ M +G P+ T+ L+ + + +GE ++
Sbjct: 203 NHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALL 262
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
RMK G A + Y ++ + I+QA V E M +G PD TY++L C
Sbjct: 263 ARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQA 322
Query: 429 NRVDKANALFDEAVRNGV 446
+VD+A L DE R G
Sbjct: 323 GKVDEAFRLKDEMERLGT 340
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 117/283 (41%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I +AG + + M R G K D +L V+ LC+ A+ L++
Sbjct: 417 TYNTLIHAHCKAGNIAKAYTLMDEMVR-RGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQS 475
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
F PD+ ++ + + + A RL EM YN ++ +S++ R
Sbjct: 476 PPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGR 535
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K+ +K+ ME VP + T+N++I CK E+A + +M E P
Sbjct: 536 LKEAI------DKLNELMEKGLVPDDT-TYNIIIHAYCKEGDLENAFQFHNKMVENSFKP 588
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T L+ L ++ + ++ + G + Y + +C ++ A+ F
Sbjct: 589 DVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFF 648
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M+ G PD+ TY+++++ R ++A + + +G
Sbjct: 649 ADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT 691
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 9/259 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKI 235
G+ LG + M + G+ S +++ LC G A + ++ PD +
Sbjct: 311 GKVHDALGMWNWMVAE-GWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRT 369
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
LI G+ G LD A + +M G + V Y ++D LC+K + +AE
Sbjct: 370 YSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVD---VLCKKV----MFDQAE 422
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++ M P N TFN LI +LC + R+ A+ +F+ M +GC PN+ T+ L+ L
Sbjct: 423 NLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGL 482
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ + M+ M + G+ + Y ++ LC + I++AM + +M G PD+
Sbjct: 483 FREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDA 542
Query: 416 ETYDLLMTKWCAHNRVDKA 434
T++ ++ +C V A
Sbjct: 543 FTFNAIIHAYCKEGNVRAA 561
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L+R V+ ++ M R G + + + L+++ LC+N A +++ + A +
Sbjct: 134 LDALLRENLVAAVVPVYDNM-RKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKG 192
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD+ +I C +LDEA+ + EM G +YN + V LC + F
Sbjct: 193 CRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG-----ASYNAV---VHALCGQ---F 241
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+ E V+ +M + G+ + + ++ CK R A + RM GC PN TF
Sbjct: 242 RM-REVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTF 300
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VL+K + +V + M + M + G+A Y + LC I +++A+ VF M
Sbjct: 301 TVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGK 360
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PD TY L+ + +D A +++++ G +
Sbjct: 361 SDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCK 399
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 108/261 (41%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + D + +V C+ A ++ E P+ + +L+KG+ DGK+ +A
Sbjct: 257 GLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDA 316
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ M G+ T++YN + + LC D R A V M + +V T
Sbjct: 317 LGMWNWMVAEGWAPSTISYNVL---IRGLCHIGDLKR----ALFVFSCMGKSDCLPDVRT 369
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LI K + A+ ++ M GC PN + ++ L + + + +ID+M
Sbjct: 370 YSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMS 429
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ + LC + R +A++VF M+ G P+ TY+ L+ +
Sbjct: 430 LENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCE 489
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A + E + +G E+ Y
Sbjct: 490 DALRMLTEMLNHGFELSLVSY 510
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 99/257 (38%), Gaps = 42/257 (16%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVA-----YNCILDCVSKLCRKKDPFRLDSE 293
L+ C + A R + YR +LG A YN +LD L R+ L +
Sbjct: 93 LVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLD---ALLREN----LVAA 145
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
V +M GV NV T+N+LI LC+ R A ++ M GC P+E + +I
Sbjct: 146 VVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIIS 205
Query: 354 SLYQAARVGEGDEMIDRMKSAG-------YAIGKK-----------------------DY 383
+L + R+ E ++ M G +A+ + Y
Sbjct: 206 ALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAY 265
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C + A ++ +M T+G P+ +T+ +L+ + +V A +++ V
Sbjct: 266 TSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVA 325
Query: 444 NGVEVKPKEYRVDPRYL 460
G Y V R L
Sbjct: 326 EGWAPSTISYNVLIRGL 342
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 34/157 (21%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK----- 285
P+D+ + L+ G +G ++A R+ EM GFEL V+YN +S LC+ +
Sbjct: 470 PNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTT---ISGLCQMRMIKEA 526
Query: 286 --------------DPFRLDS------------EAEKVLLDMEYNGVPRNVETFNVLISN 319
D F ++ A +L M+ PRN+ + L+S
Sbjct: 527 MILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSG 586
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
LC + +DA+ +M G PNE T+ VL++ ++
Sbjct: 587 LCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIF 623
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 316 LISNLCKIRRS---EDAIKLFYRM-GEWGCH-PNETTFLVLIKSLYQAARVGEGDEMIDR 370
L++ +C R+ + A+K FYR + GC P + L+ +L + V + D
Sbjct: 93 LVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDN 152
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ AG Y + LC +R+ A + ++M G PD ++ +++ C +R
Sbjct: 153 MRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDR 212
Query: 431 VDKANALFDEAVRNG------VEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
+D+A + E G V ++R+ +L V +G + +T+
Sbjct: 213 LDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTV 263
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
K + +D LV + +GF+ M R+ G SL ++++ LC+N K
Sbjct: 121 KAYLTILDILVEENHVKRAIGFYREM-RELGIPSSVVSLNILIKALCKN-------KETV 172
Query: 224 DTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
D+A IF PD LI G C G + EAK L +EM + GF V Y +
Sbjct: 173 DSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSL 232
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ LC+ + LD EA +L +M+ N + NV T++ L+ LCK S A++L
Sbjct: 233 ---IHGLCQSNN---LD-EAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLE 285
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M + PN T+ LI L + ++ E E++DRM+ G Y + ++ LC
Sbjct: 286 VMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAG 345
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDL 420
++A + ++M G +P+ ++ L
Sbjct: 346 SYQEAANFIDEMVLGGISPNRASWSL 371
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 146/357 (40%), Gaps = 14/357 (3%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNAN-FSHTDETLSFFTDYFGRRKDFKAIHDFL 154
T SLV + + +A+ F+ + N F H ET F+ L
Sbjct: 14 TNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEGML 73
Query: 155 VDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
K+ ++ S R RP + F +ME + + + + +++ L E
Sbjct: 74 ERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKME-GFQLRPTQKAYLTILDILVE 132
Query: 212 NGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGK-LDEAKRLAREMYRGGFELGTV 269
+ A ++ P + ++LIK C + + +D A R+ +EM G + +
Sbjct: 133 ENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSY 192
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
Y + ++ LCR + SEA+++ +ME G +V T+ LI LC+ ++A
Sbjct: 193 TYGTL---INGLCRLGNI----SEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEA 245
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
I L M PN T+ L+ L + + ++++ M + Y +
Sbjct: 246 IGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLING 305
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC ++ +A+ + ++M+ G P++ Y +++ CA +A DE V G+
Sbjct: 306 LCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGI 362
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 16/212 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVK 223
T +S +D L + G +Q + E M++ + + + ++ LC E E L +
Sbjct: 263 TYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLP-NMVTYSTLINGLCKERKLREAVEILDR 321
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG-------FELGTVAYNCILD 276
+ P+ + +I G C G EA EM GG + L +N +
Sbjct: 322 MRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMV-- 379
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
V LC DP R A ++ L M + ++TF+ L+ CK A ++ M
Sbjct: 380 -VQGLCNNVDPPR----AFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEM 434
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
GC P+E + V+I L+ +V E E +
Sbjct: 435 VLDGCIPDEGVWNVVIGGLWDRKKVREATEQL 466
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
++ R DAI++F++M + P + +L ++ L + V M+ G
Sbjct: 97 RVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVV 156
Query: 382 DYYEFLTRLC-GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ LC E ++ A+ +F++M G PDS TY L+ C + +A LF E
Sbjct: 157 SLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKE 216
Query: 441 AVRNGVEVKPKEY 453
+ G Y
Sbjct: 217 MEQKGFSASVVTY 229
>gi|357148528|ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Brachypodium distachyon]
Length = 464
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 137/336 (40%), Gaps = 29/336 (8%)
Query: 117 FNHWLTQNANFSHTDETL----------SFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTL 166
F WL NFS + E FT + + D +A+ L P T
Sbjct: 103 FLAWLRAKPNFSPSAEHFDALLLPLARARLFTHLWTQASDMRAL-------GLPLSPATF 155
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ I + P Q + F R+ +G + + +++ LC NG + A KL++ A
Sbjct: 156 SAVISSYGHSRLPEQAVEVFNRLPH-FGCPQTTEVYNALLDALCSNGNFAGAYKLLRRMA 214
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ + PD L+ WC GKL EA+ +M GF + ++D + + R +
Sbjct: 215 RKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGRLE 274
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
EA+ + GV +V TFN L LC + A+ L G P+
Sbjct: 275 -------EAKAFAVRFTKEGVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRGLCPDI 327
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+T+ V++ ++ +A ++ E + G+ Y + LC R A + F
Sbjct: 328 STYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAAIVKALCKAGRFGDAFAFFGD 387
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNR--VDKANALFD 439
MK+ GH P+ Y +++ K C +D AN L +
Sbjct: 388 MKSKGHPPNRPVY-VMLVKMCVRGGRFLDAANYLVE 422
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 5/187 (2%)
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL +A +V + + G P+ E +N L+ LC A KL RM G P+ TF
Sbjct: 166 RLPEQAVEVFNRLPHFGCPQTTEVYNALLDALCSNGNFAGAYKLLRRMARKGVAPDRATF 225
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + ++ E +D M S G+ + + L R+E+A + +
Sbjct: 226 STLVDAWCASGKLREAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGRLEEAKAFAVRFTK 285
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
+G PD T++ L C V A L +A G+ Y+V P K
Sbjct: 286 EGVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRGLCPDISTYKV-----MLPAVAKA 340
Query: 469 GKKRETL 475
G+ E
Sbjct: 341 GQIEEAF 347
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 64/147 (43%)
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
DM G+P + TF+ +IS+ R E A+++F R+ +GC + L+ +L
Sbjct: 142 DMRALGLPLSPATFSAVISSYGHSRLPEQAVEVFNRLPHFGCPQTTEVYNALLDALCSNG 201
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+++ RM G A + + + C ++ +A + + M + G P D
Sbjct: 202 NFAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMASRGFRPPVRGRD 261
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
LL+ R+++A A + GV
Sbjct: 262 LLVDGLVRAGRLEEAKAFAVRFTKEGV 288
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 9/187 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D LVRAGR + F R ++ G D + + + LC+ G +A L+ D ++
Sbjct: 264 VDGLVRAGRLEEAKAFAVRFTKE-GVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRG 322
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +++ G+++EA RL G Y I+ + K R D F
Sbjct: 323 LCPDISTYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAAIVKALCKAGRFGDAF 382
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
DM+ G P N + +L+ + R DA M E G P TF
Sbjct: 383 AF-------FGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLVEMSEAGFAPRVPTF 435
Query: 349 LVLIKSL 355
++ L
Sbjct: 436 NAVVDGL 442
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 26/266 (9%)
Query: 193 YGF---KRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKL 249
YGF + KD+ RL E + +N I PD ++L+ C +GK+
Sbjct: 236 YGFCIVGKFKDAFRLFNEMVMKN----------------INPDAYTFNILVDALCKEGKI 279
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
EAK + M + G E V YN ++D C + +A+ VL + V N
Sbjct: 280 KEAKNVIAVMMKEGVEPTVVTYNTLMD---GYCLVNEV----GKAKHVLSIISRMRVAPN 332
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
++N++I+ CKI+ ++A+ LF+ M G P++ T+ LI L +A R+ E++D
Sbjct: 333 SRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVD 392
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M + Y + C + +++A+++ +K+K G P+ TY++L+ C
Sbjct: 393 EMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGG 452
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRV 455
++ A +F + + G V Y +
Sbjct: 453 QLKNAQDVFQDLLIKGYNVNAWTYNI 478
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 7/226 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ + +++I G+C +DEA L EM G V YN ++D + K R +
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAW 388
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L E M N +P ++ T+N LI CK + + AI L ++ E G PN T+
Sbjct: 389 ELVDE-------MHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTY 441
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + ++ ++ + GY + Y + LC ++A + KM+
Sbjct: 442 NILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMED 501
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+G PD+ TY+ ++ + +KA L E V GV V E R
Sbjct: 502 NGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIR 547
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 124/299 (41%), Gaps = 49/299 (16%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL 238
PT VL +ME G K D +L +++ C G ++A + +
Sbjct: 84 PT-VLSLSTQMESK-GVKPDLFTLSILINCYCHLGQMTFAFSV-------------FAKI 128
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L G C++GK++EA + GF L V Y +++ + K+ + + ++ + E L
Sbjct: 129 LKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKL 188
Query: 299 LD----------------------------MEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
++ M +P V TF+ LI C + + +DA
Sbjct: 189 VNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAF 248
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+LF M +P+ TF +L+ +L + ++ E +I M G Y +
Sbjct: 249 RLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGY 308
Query: 391 CGIERIEQA---MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
C + + +A +S+ +M+ P+S +Y++++ +C VD+A LF E G+
Sbjct: 309 CLVNEVGKAKHVLSIISRMRVA---PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGI 364
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 170/402 (42%), Gaps = 65/402 (16%)
Query: 85 RLHLIFSH----VTPTP-SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTD 139
+L +F H ++P P SL + T++ +P+ G+ ++L N H
Sbjct: 25 KLSSLFEHPHRPISPGPISLTKDTVSNAPDRGQ----LENFLKSNCKSGHI--------- 71
Query: 140 YFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
+R + ++ + L+D + + + + + + R V+ ++RM G D
Sbjct: 72 ---KRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSL-IGLAPDF 127
Query: 200 DSLRLVVEKLC-----ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKR 254
+L +++ C + G A E L + + P+ L+KG C+ ++ EA
Sbjct: 128 ITLNILINCYCNLNKVDFGLAVLGEMLRRGHS----PNTVTFTSLVKGLCLGSRISEATG 183
Query: 255 LAREMYRGGFELGTVAYNCILD--CVSK-----------------------------LCR 283
L R+M R G+ V Y +L+ C++ C
Sbjct: 184 LLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCT 243
Query: 284 KKDPFRLDS---EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
D D + +++ L+M+ G+ +V ++ +I +C R E A LF M + G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
HPN TF VLI +L +A ++ E + ++ M G + Y + C RI+ A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+F M++ G D+ +Y++L+ +C R+ +A L+ E +
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMM 405
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 131/311 (42%), Gaps = 11/311 (3%)
Query: 163 PKTLASC--IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
P + C ID L + G + F M + G D + ++ +C G A+
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEM-KGRGISPDVVAYSSIIHGMCHTGRWEGAKG 294
Query: 221 LVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L + +E + P+ ++LI C GK++EA L + M + G T YN ++D
Sbjct: 295 LFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID--- 351
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
C + R+D +A + + ME G+ + ++NVLI+ CK R +A KL+ M
Sbjct: 352 GFCLEG---RID-DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK 407
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
P T+ L+ L++ +V + + MK Y L LC + +A
Sbjct: 408 EIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEA 467
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
M +F ++ P + ++ L+ C +++ A LF+ G+E Y V
Sbjct: 468 MELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHG 527
Query: 460 LKKPIAVKKGK 470
L K ++ K
Sbjct: 528 LCKSGQLENAK 538
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 9/302 (2%)
Query: 140 YFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
+ GR + K + + +VD T ID L +AG+ + + M + G D
Sbjct: 285 HTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQR-GESPDT 343
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLARE 258
+ +++ C G A L ++ D + ++LI G+C G++ EAK+L RE
Sbjct: 344 FTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYRE 403
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M + YN +L + + + +D + L E M+ + + T+N+L+
Sbjct: 404 MMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGE-------MKVHDLTPESCTYNILLD 456
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LCK +A++LF+ + P+ F LI L +A ++ E+ +R+ G
Sbjct: 457 GLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEP 516
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC ++E A +F M+ G P+ T++ LM +C ++ + K L
Sbjct: 517 NVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELL 576
Query: 439 DE 440
E
Sbjct: 577 QE 578
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 9/282 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ ++ + ++ E T + ID GR F ME G + D S
Sbjct: 322 GKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK-GIETDAVS 380
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ C++G A+KL ++ EI P + L+ G +GK+ +A L EM
Sbjct: 381 YNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMK 440
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ YN +LD LC+ SEA ++ +E + +++ FN LI L
Sbjct: 441 VHDLTPESCTYNILLD---GLCKNNHL----SEAMELFHYLENHDFQPSIQIFNCLIDGL 493
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R+ E A +LF R+ G PN T+ V+I L ++ ++ ++ M+ G A
Sbjct: 494 CKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNL 553
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ + C + +++ + + ++M +PD+ T +++
Sbjct: 554 VTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 15/287 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF D+ + ++ LC G A +L + A I PD + + L+KG C+ G + A
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ EM G YN + ++ LC+ + S+A V+ D G +V T
Sbjct: 383 LQVMNEMAEEGCHPDIQTYNIV---INGLCKMGNI----SDATVVMNDAIMKGYLPDVFT 435
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI CK + + A++L RM E+G P+ T+ ++ L +A +V E +E M
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + C ++E+A V KM +G +PD+ +++ L+ +C + ++
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKM 479
A LF +++ K Y I GK + EK+
Sbjct: 556 GAYLLFQ-------KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 595
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ L G + L F + G K D +V+ LC G +A +++ +
Sbjct: 330 TYCSLINGLCAEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNE 388
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A E PD + +++I G C G + +A + + G+ +N ++D C+
Sbjct: 389 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID---GYCK 445
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +LDS + V EY P + T+N +++ LCK + + + F M GCHP
Sbjct: 446 R---LKLDSALQLVERMWEYGIAPDTI-TYNSVLNGLCKAGKVNEVNETFQEMILKGCHP 501
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +LI++ ++ ++ E ++I +M G + + C +E A +F
Sbjct: 502 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLF 561
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+K++ G++ ++T++ L+ + + A +FDE + G YRV
Sbjct: 562 QKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRV 613
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 107/285 (37%), Gaps = 42/285 (14%)
Query: 206 VEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LCE G A +LV PD + LI+G C EA R M G
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
YN I+D K+ + EA ++L D + G + T+ LI+ LC
Sbjct: 291 PDDFTYNTIIDGYCKI-------SMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 343
Query: 326 SEDAIKLF-----------------------------------YRMGEWGCHPNETTFLV 350
E A++LF M E GCHP+ T+ +
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 403
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L + + + +++ GY + + C +++ A+ + E+M G
Sbjct: 404 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 463
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD+ TY+ ++ C +V++ N F E + G P Y +
Sbjct: 464 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 508
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 141/370 (38%), Gaps = 46/370 (12%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S + L G L M + G D + +V+ LC+ G S A ++ D
Sbjct: 368 SLVKGLCLQGLILHALQVMNEMAEE-GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM 426
Query: 228 EIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK- 285
+ + PD + LI G+C KLD A +L M+ G T+ YN +L+ + K +
Sbjct: 427 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 486
Query: 286 ---------------DPFRLD------------SEAEKVLLDMEYNGVPRNVETFNVLIS 318
+P + EA KV++ M G+ + +FN LI
Sbjct: 487 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 546
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C+ E A LF ++ E G TF LI + + +++ D M S G+
Sbjct: 547 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 606
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A +M G P T+ ++ ++RV +A +
Sbjct: 607 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 666
Query: 439 DEAVRNGV--EVKPKEYRVDPRYLKKP-IAV----KKGK----KRETLPE-----KMARK 482
V+ GV EV D + + P I V KKG E L E K+ RK
Sbjct: 667 HIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVRDNKLTRK 726
Query: 483 RRRLKQIRLS 492
R L LS
Sbjct: 727 HRMLLLNNLS 736
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 9/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV L +G+ A +L + +FP+ + ++ C G + EA L ++ + G
Sbjct: 160 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 219
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ YN + LC RL EA +++ M VP +V T+N LI LCK
Sbjct: 220 MSINLFTYNIW---IRGLCEAG---RL-PEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKK 271
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
++A+ RM GC P++ T+ +I + + V E E++ G+ + Y
Sbjct: 272 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 331
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC +E+A+ +F + + G PD Y+ L+ C + A + +E
Sbjct: 332 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 391
Query: 444 NGVEVKPKEYRV 455
G + Y +
Sbjct: 392 EGCHPDIQTYNI 403
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++ I+G C G+L EA RL M R V YN + + LC+K P EA
Sbjct: 228 NIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTL---IRGLCKKSMP----QEAMH 279
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
L M G + T+N +I CKI ++A +L G P++ T+ LI L
Sbjct: 280 YLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC 339
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
V E+ + ++ G Y + LC I A+ V +M +G +PD +
Sbjct: 340 AEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 399
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY++++ C + A + ++A+ G
Sbjct: 400 TYNIVINGLCKMGNISDATVVMNDAIMKG 428
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 19/256 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA-----SYAE 219
T + ID + + L ERM +YG D + V+ LC+ G ++ E
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLVERM-WEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 493
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++K P+ ++LI+ +C K++EA ++ +M + G V++N + +
Sbjct: 494 MILKGC----HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL---IY 546
Query: 280 KLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
CR D E +L +E G +TFN LI A K+F M
Sbjct: 547 GFCRNGD-----LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 601
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G + T+ VLI + A V + M G+ + + L R+ Q
Sbjct: 602 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 661
Query: 399 AMSVFEKMKTDGHNPD 414
A+ + M G P+
Sbjct: 662 AVGIIHIMVKIGVVPE 677
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 9/276 (3%)
Query: 205 VVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC S A KL+ K T + + P+ + LI G+ +G+++EA+RL M G
Sbjct: 355 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 414
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
YN I+ C+SK + + EA LL+++ G+ + TF I K
Sbjct: 415 VAPDIFCYNAIISCLSKAGKME-------EASTYLLEIQGRGLKPDAVTFGAFILGYSKT 467
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A K F M + G PN + VLI ++A + E + + + G +
Sbjct: 468 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 527
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
F+ L R+++A+ VF ++K G PD TY L++ +C V+KA L DE
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587
Query: 444 NGVEVKPKEYRVDPRYLKKPIAVKKGKKR-ETLPEK 478
G+ Y L K +++ +K + +PEK
Sbjct: 588 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 623
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 7/218 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ ++ G C +++EAK EM + G + YN + R+ D
Sbjct: 205 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK---PDYNACSALIDGFMREGDI- 260
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
E ++ M G+P N+ T+NVLI LCK + E A ++ M GC PN TF
Sbjct: 261 ---DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF 317
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI+ + +G E++D M+ Y + LC + + A + EKM
Sbjct: 318 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 377
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P+ Y L+ + + R+++A L D +GV
Sbjct: 378 SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGV 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 10/285 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ +AG + L F + G D + + L +NG A K+ + +
Sbjct: 496 INGHFKAGNLMEALSIFRHLHA-LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD LI G+C G++++A L EM G YN ++D LC+ D
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVD---GLCKSGDIQ 611
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A K+ M G+ + T++ +I CK +A LF+ M G P+ +
Sbjct: 612 R----ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 667
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + + + M G+A + + C +I++A +F++M
Sbjct: 668 NALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIA 726
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
PD TY ++ C ++++AN LF E + V Y
Sbjct: 727 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 9/246 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+V+ LC++G A KL + + PD +I G+C + EA L EM G
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ + YN + V C++ D +A + +M G + +FN LI CK
Sbjct: 660 VQPHSFVYNAL---VHGCCKEGDM----EKAMNLFREMLQKGFATTL-SFNTLIDGYCKS 711
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ ++A +LF M P+ T+ +I +A ++ E + + M+ + Y
Sbjct: 712 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ + + + ++FEKM G PD TY L++ C + + +A L DE V
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 831
Query: 444 NGVEVK 449
G+ K
Sbjct: 832 KGMLTK 837
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 11/219 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD I G+ GK+ EA + EM G Y +++ F+
Sbjct: 452 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN---------GHFKA 502
Query: 291 DS--EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA + + GV +V+T + I L K R ++A+K+F + E G P+ T+
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + V + E+ D M G A Y + LC I++A +F+ M
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G PDS TY ++ +C V +A +LF E GV+
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 661
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L +AG+ + + ++ G K D + + + G + A K + +
Sbjct: 426 ISCLSKAGKMEEASTYLLEIQ-GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P++ + +LI G G L EA + R ++ G + + + K R +
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ--- 541
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA KV +++ G+ +V T++ LIS CK E A +L M G PN +
Sbjct: 542 ----EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 597
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ L ++ + ++ D M G Y + C E + +A S+F +M +
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 657
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P S Y+ L+ C ++KA LF E ++ G
Sbjct: 658 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 123/275 (44%), Gaps = 9/275 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L RA R + FE M++ G K D ++ +++ G ++ + P
Sbjct: 219 LCRAKRMNEAKLTFEEMQKT-GLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 277
Query: 233 DKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ I ++LI G C GK+++A + + M G + + + C+L + CR+ + R
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF-CLL--IEGYCREHNMGR-- 332
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A ++L +ME + + ++ +I+ LC + A KL +M G PN + L
Sbjct: 333 --ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 390
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I R+ E ++D M +G A Y ++ L ++E+A + +++ G
Sbjct: 391 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 450
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD+ T+ + + ++ +A FDE + +G+
Sbjct: 451 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 485
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 10/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L ++G + F+ M + G + D + +++ C++ + A L + ++
Sbjct: 601 VDGLCKSGDIQRARKLFDGMP-EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + + L+ G C +G +++A L REM + GF T+++N ++D K C+ +
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQ--- 715
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA ++ +M + + T+ +I CK + E+A LF M E + T+
Sbjct: 716 ----EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + E + ++M + G + Y + C + + +A + +++
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 831
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G +DLL+T C + +A+ L DE G++
Sbjct: 832 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 870
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 103/284 (36%), Gaps = 42/284 (14%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDK 234
+ G P ++L FF + G + DS ++ +LC + A ++ +
Sbjct: 80 QVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSS 139
Query: 235 ICD------------------LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
I D +LI + G LDEA +
Sbjct: 140 ILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVF-------------------- 179
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
K D + L M G+ N T+ ++ + LC+ +R +A F M
Sbjct: 180 ----FVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM 235
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ G P+ LI + + E + D M S G I Y + LC ++
Sbjct: 236 QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 295
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
E+A + + M T G P+S T+ LL+ +C + + +A L DE
Sbjct: 296 EKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 339
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD C LI G+ +G +DE R+ M G + + YN + + LC+ F
Sbjct: 242 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVL---IHGLCK----FGK 294
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A ++L M G N TF +LI C+ A++L M + P+ ++
Sbjct: 295 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 354
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L + ++++++M +G Y + RIE+A + + M G
Sbjct: 355 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 414
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PD Y+ +++ ++++A+ E G++
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 451
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 8/218 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
S +++ C++ A +L ++ A +I PD +I C GK++EA L +EM
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 759
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ TV Y ++ +KL + + F L + M GV + T+ ++I
Sbjct: 760 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK-------MVAKGVKPDEVTYGLVIYA 812
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
CK +A KL + G T +LI +L + + E +++D M G
Sbjct: 813 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 872
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ ++++A VFE +K+ G PD+ T
Sbjct: 873 LAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 11/299 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
LVD G + + I+ L + G L +ME + K ++++LC++G
Sbjct: 32 LVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETH-IKAHVVIYNAIIDRLCKDG 90
Query: 214 YASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ +A+ L + ++ IFPD +I +C G+ +A++L R+M V ++
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+++ + K + SEAE++ DM G+ T+N +I CK R DA ++
Sbjct: 151 ALINALVKEGKV-------SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM 203
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M C P+ TF LI +A RV G E+ M G Y + C
Sbjct: 204 LDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 263
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+ ++ A + M + G P+ T+ ++ C+ + KA A+ ++ ++ EV P+
Sbjct: 264 VGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS--EVCPR 320
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 7/215 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C G + A L +M + V YN I+D +LC KD + A+ +
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID---RLC--KDGHHI--HAQNLF 99
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G+ +V T++ +I + C+ R DA +L M E +P+ TF LI +L +
Sbjct: 100 TEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKE 159
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+V E +E+ M G Y + C +R+ A + + M + +PD T+
Sbjct: 160 GKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
L+ +C RVD +F E R G+ Y
Sbjct: 220 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 254
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E GC P+ TF L+ L RV + ++DRM G+ + Y + LC +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGD 56
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E A+++ KM+ Y+ ++ + C A LF E G+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI 107
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 4/142 (2%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G +V TF L++ LC R A+ L RM E G P T +I L +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGT----IINGLCKMGD 56
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
++ +M+ Y + RLC A ++F +M G PD TY
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 421 LMTKWCAHNRVDKANALFDEAV 442
++ +C R A L + +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMI 138
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ++ R + F+++ GFK + + ++ LC+N + ++A +L
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQI-LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N P+ + L+ G C G+ +A L R+M + E + + ++D K+ +
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ E V++ M V +V T+ LI+ LC ++A ++FY M GC+P
Sbjct: 274 LMEA----KELYNVMIQMS---VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
NE + LI ++ RV +G ++ M G Y + C + R + A VF
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M + PD TY++L+ C + +V+KA +F+ + +++ Y +
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 9/284 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
+ + R V+ FE+M+ G + +V+ +C + A + F P
Sbjct: 93 IAKMNRYDVVISLFEQMQ-ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEP 151
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D L+ G+C ++++A L ++ GF+ V Y ++ C LC+ +
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC---LCKNRHL---- 204
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ A ++ M NG NV T+N L++ LC+I R DA L M + PN TF L
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + + ++ E E+ + M Y + LC +++A +F M+ +G
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+ Y L+ +C RV+ +F E + GV Y V
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
++PD LI G C+ G LDEA+++ M R G V Y + + C+ K
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL---IHGFCKSK-- 342
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
R++ + K+ +M GV N T+ VLI C + R + A ++F +M P+ T
Sbjct: 343 -RVE-DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ VL+ L +V + + + M+ I Y + +C + ++E A +F +
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G P+ TY +++ +C + +A++LF + +G
Sbjct: 461 SKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 9/255 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID V+ G+ + + M + + D + ++ LC G A ++
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYP-DVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N +P++ I LI G+C ++++ ++ EM + G T+ Y + + C
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL---IQGYCL 375
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
P A++V M P ++ T+NVL+ LC + E A+ +F M +
Sbjct: 376 VGRP----DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ ++I+ + + +V + ++ + S G Y ++ C I +A S+F
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 404 EKMKTDGHNPDSETY 418
+KMK DG P+ Y
Sbjct: 492 KKMKEDGFLPNESVY 506
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
F L+S + K+ R + I LF +M G P T +++ + +++ + +M
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G+ + L C RIE A+++F+++ G P+ TY L+ C + ++
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 433 KANALFDEAVRNG 445
A LF++ NG
Sbjct: 206 HAVELFNQMGTNG 218
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 8/247 (3%)
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMY 260
L ++ LC++G S A +L N+ F D + + L+ G C GKLDEA R+ +E+
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G + V+YN + +S C KK +LD EA L +M G+ + T+++LI L
Sbjct: 546 GRGCVMDRVSYNTL---ISGCCGKK---KLD-EAFMFLDEMVKRGLKPDNYTYSILICGL 598
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ + E+AI+ + G P+ T+ V+I +A R EG E D M S
Sbjct: 599 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 658
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C R+ A+ + E MK G +P+S TY L+ +RV++A LF+E
Sbjct: 659 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 718
Query: 441 AVRNGVE 447
G+E
Sbjct: 719 MRMEGLE 725
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 15/298 (5%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLG-FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
G L + I L + G+ ++ L +F+ + + GF D + ++ LCE G A +
Sbjct: 482 GGGLLTTLISGLCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKLDEAFR 539
Query: 221 LVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ K+ D++ + LI G C KLDEA EM + G + Y+ IL C
Sbjct: 540 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS-ILIC-- 596
Query: 280 KLCRKKDPFRLDSEAEKVLL--DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
F ++ E + D + NG+ +V T++V+I CK R+E+ + F M
Sbjct: 597 ------GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
PN + LI++ ++ R+ E+ + MK G + Y + + I R+E
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+A +FE+M+ +G P+ Y L+ + ++ K L E V Y V
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA K+ ME GV NV TFN +I L R ++A +M E G P T+ +L+
Sbjct: 291 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 350
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
K L +A R+G+ ++ M G+ Y + + +A+ + + M + G +
Sbjct: 351 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
S TY+ L+ +C + + D A L E + G V +
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + I +C GK++EA +L +M G V +N ++D + R + F
Sbjct: 269 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 328
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ M G+ + T+++L+ L + +R DA + M + G PN +
Sbjct: 329 MFKEK-------MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI S +A + + E+ D M S G ++ Y + C + + A + ++M +
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
G N + ++ ++ C+H +FD A+R
Sbjct: 442 IGFNVNQGSFTSVICLLCSH-------LMFDSALR 469
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 129/325 (39%), Gaps = 12/325 (3%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDF-LVDNKEVLGPKTLASCI-DRLVRAGRPTQVLGFFE 187
+D + + F R + A+ F ++ NK + KT + + LVRA + F+
Sbjct: 204 SDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 263
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVD 246
+ + G D + C+ G A KL K + P+ + +I G +
Sbjct: 264 VVCK--GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 321
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+ DEA +M G E + Y+ ++ +++ R D + VL +M G
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF-------VLKEMTKKGF 374
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P NV +N LI + + AI++ M G +T+ LIK + + +
Sbjct: 375 PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER 434
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ M S G+ + + + + LC + A+ +M +P L++ C
Sbjct: 435 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 494
Query: 427 AHNRVDKANALFDEAVRNGVEVKPK 451
H + KA L+ + + G V +
Sbjct: 495 KHGKHSKALELWFQFLNKGFVVDTR 519
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 13/291 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T + ID L GR + F E+M ER G + + ++V+ L A ++K
Sbjct: 310 TFNTVIDGLGMCGRYDEAFMFKEKMVER--GMEPTLITYSILVKGLTRAKRIGDAYFVLK 367
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + FP + I + LI + G L++A + M G L + YN + + C
Sbjct: 368 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL---IKGYC 424
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ AE++L +M G N +F +I LC + A++ M
Sbjct: 425 KNGQA----DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 480
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P LI L + + + E+ + + G+ + + L LC ++++A +
Sbjct: 481 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 540
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+++ G D +Y+ L++ C ++D+A DE V+ G +KP Y
Sbjct: 541 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG--LKPDNY 589
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 15/225 (6%)
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMY-----RGGFELGTVAYNCILDCVSKLCRKKDPF 288
K+ DLLI+ +C K D LA +++ +G F T N +L + L R + F
Sbjct: 202 KMSDLLIEVYCTQFKRDGC-YLALDVFPVLANKGMFPSKTTC-NILL---TSLVRANE-F 255
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA D+ GV +V F I+ CK + E+A+KLF +M E G PN TF
Sbjct: 256 QKCCEA----FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF 311
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L R E ++M G Y + L +RI A V ++M
Sbjct: 312 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 371
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G P+ Y+ L+ + ++KA + D V G+ + Y
Sbjct: 372 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 416
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD ++I G C + +E + EM + TV YN + + CR
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL---IRAYCRSG- 672
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
RL S A ++ DM++ G+ N T+ LI + I R E+A LF M G PN
Sbjct: 673 --RL-SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 729
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ LI + ++ + + ++ M S K Y + + +A + +M
Sbjct: 730 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789
Query: 407 KTDGHNPDSETY 418
+ G PDS TY
Sbjct: 790 REKGIVPDSITY 801
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 172/438 (39%), Gaps = 29/438 (6%)
Query: 45 FSSKPTSNPKTIDDPDQV--IARSLSGELL--ENLEADPLPISQRLHLIFSHVTPTPSLV 100
F S PTS PD V I+R LS +LE P S +L + +LV
Sbjct: 30 FHSFPTSQVSGTLLPDLVNEISRLLSDHRYPHHDLELSLNPFSAQL---------STNLV 80
Query: 101 QSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV 160
+ L G + F W F H+ + + G K F + DFL + +E
Sbjct: 81 EQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLTEMRES 140
Query: 161 ----LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
+ + +A P + F RM+ ++G K L ++ LC+ +
Sbjct: 141 HHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMD-EFGVKPTIHDLDKLLFILCKRKHVK 199
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A++L N K +LI GW G ++A L + M G + +AYN +L
Sbjct: 200 QAQQLFHQAKNRFSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLL- 258
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
LC+ R+D EA+ + DM V + T+++ I + C + A ++ +M
Sbjct: 259 --QALCKGG---RVD-EAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKM 312
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ PN T+ +IK L + V E +++D M S G Y C +
Sbjct: 313 RRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEV 372
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
+A+ + +M+ D PD TY++++ R DK +++ V Y V
Sbjct: 373 NRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSV- 431
Query: 457 PRYLKKPIAVKKGKKRET 474
+ KKGK E
Sbjct: 432 ---MIHGFCKKKGKLEEA 446
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 130/319 (40%), Gaps = 17/319 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K HD LV L + + I+ L + G V ++E + K D
Sbjct: 141 GEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLE-GHSVKPDVVM 199
Query: 202 LRLVVEKLCENGYAS-----YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
++ LC+N Y+E +VK I PD LI G+C+ G L EA L
Sbjct: 200 YNTIINSLCKNKLLGDACDVYSEMIVKG----ISPDVVTYTTLIHGFCIMGHLKEAFSLL 255
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM +N ++D +SK + K EA+ +L M + +V T+N L
Sbjct: 256 NEMKLKNINPNVCTFNILIDALSKEGKMK-------EAKILLAVMMKACIKPDVFTYNSL 308
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I + + A +FY M + G P+ + +I L + V E + + MK
Sbjct: 309 IDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNM 368
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + LC +E+A+++ ++MK G PD +Y +L+ C R++ A
Sbjct: 369 IPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKE 428
Query: 437 LFDEAVRNGVEVKPKEYRV 455
+F + G + Y V
Sbjct: 429 IFQRLLAKGYHLNVHAYTV 447
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
TL + I L G + L F +++ GF+ D+ S ++ LC+ G +L+ K
Sbjct: 129 TLNTLIKGLCFRGEIKKALYFHDQLVAQ-GFQLDQVSYGTLINGLCKTGETKAVARLLRK 187
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + PD + + +I C + L +A + EM G V Y ++ +
Sbjct: 188 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGH 247
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K+ F L +E M+ + NV TFN+LI L K + ++A L M + P
Sbjct: 248 LKEAFSLLNE-------MKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKP 300
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI + V + M G + Y + LC + +++AMS+F
Sbjct: 301 DVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLF 360
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E+MK PD TY+ L+ C ++ +++A AL G++ Y +
Sbjct: 361 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTI 412
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 62/146 (42%)
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
E NG+ ++ T ++LI+ C A +F + + G HPN T LIK L +
Sbjct: 84 EPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEI 143
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ D++ + G+ + + Y + LC + + K++ PD Y+ +
Sbjct: 144 KKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI 203
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVE 447
+ C + + A ++ E + G+
Sbjct: 204 INSLCKNKLLGDACDVYSEMIVKGIS 229
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 13/298 (4%)
Query: 154 LVDNKEVLGPKT----LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L+D LG KT S I+ + G + G RM D+ K D S +++
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV-DWNLKPDSYSYNTLLDGY 412
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C G+ S A L E I P + L+KG C G D+A ++ M + G
Sbjct: 413 CREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDE 472
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y+ +LD + K+ + F S K D+ G ++ TFN +IS LCK+ + +
Sbjct: 473 VGYSTLLDGLFKM----ENFEGASTLWK---DILARGFTKSRITFNTMISGLCKMGKMVE 525
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A ++F +M + GC P+ T+ LI +A+ VG+ ++ M+ + + Y ++
Sbjct: 526 AEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLIS 585
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L R+ + + +M G P+ TY L+ WC +DKA + + E NG+
Sbjct: 586 GLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 145/365 (39%), Gaps = 20/365 (5%)
Query: 93 VTPTPSL-----VQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
+ PT SL V NF P ++ H L++ + T L+ D +
Sbjct: 80 LNPTASLGFFQFVSKQQNFRPNV-KSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRG 138
Query: 148 KAIHDFLVD--NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
I D LV + P + V G L F+ M + G S +
Sbjct: 139 NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGK-CGRIPSLRSCNSL 197
Query: 206 VEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ L +NG A + + I PD + +++ +C DGK+DEA ++M G
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK-VLLDMEYNGVPRNVETFNVLISNLCKI 323
E V Y+ +++ L D EA K VL M GV RNV T+ +LI CK
Sbjct: 258 EPNIVTYHSLINGYVSLG--------DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309
Query: 324 RRSEDAIKLFYRMGEWGCH-PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ ++A K+ M E P+E + VLI + ++ + ++D M G
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ C I +A V +M PDS +Y+ L+ +C +A L D+ +
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429
Query: 443 RNGVE 447
+ G+E
Sbjct: 430 QEGIE 434
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 128/292 (43%), Gaps = 10/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ V G G + M + G R+ + L+++ C+ AEK+++
Sbjct: 263 TYHSLINGYVSLGDVEAAKGVLKFMS-EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 321
Query: 225 TANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E + PD++ +LI G+C GK+D+A RL EM R G + N + ++ C
Sbjct: 322 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL---INGYC 378
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++ + EAE V+ M + + ++N L+ C+ + +A L +M + G
Sbjct: 379 KRGEI----HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P T+ L+K L + + ++ M G A + Y L L +E E A ++
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTL 494
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
++ + G T++ +++ C ++ +A +FD+ G YR
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 16/241 (6%)
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
E + + ++SY E T N + + IC ++ G G++DEA L ++M GF
Sbjct: 625 EGMLDKAFSSYFEM----TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF-- 678
Query: 267 GTVAYNCILDC-VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+ C L + +K LD + LL P N+ +N+ I+ LCK +
Sbjct: 679 -FPDHECFLKSDIRYAAIQKIADSLDESCKTFLL-------PNNI-VYNIAIAGLCKTGK 729
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+DA + F + G P+ T+ LI A V E + D M G Y
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LC E +++A +F K+ G P+ TY+ L+ +C +D A L D+ + G
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 446 V 446
+
Sbjct: 850 I 850
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 45/287 (15%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ + L R GR + ++M D+GF D + + + A+ L +
Sbjct: 651 STMVSGLYRLGRIDEANLLMQKMV-DHGFFPDHECF--LKSDIRYAAIQKIADSLDESCK 707
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ P++ + ++ I G C GK+D+A+R + GF Y ++ S +
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
FRL E M G+ N+ T+N LI+ LCK + A +LF+++ + G PN
Sbjct: 768 AFRLRDE-------MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV 820
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI GY C I ++ A + +KM
Sbjct: 821 TYNTLID---------------------GY--------------CKIGNMDAAFKLKDKM 845
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+G +P TY L+ C H ++++ L ++ ++ GV+ K EY
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEY 892
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 114/285 (40%), Gaps = 10/285 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
++ S ++ LV+ G +++M R G D + ++V C++G A VK
Sbjct: 192 RSCNSLLNNLVKNGETHTAHYVYQQMIR-VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 250
Query: 224 DTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
N + P+ LI G+ G ++ AK + + M G V Y ++ K C
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 310
Query: 283 RKKDPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+ EAEKVL M E + + + VLI C+ + +DA++L M G
Sbjct: 311 KM-------DEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 363
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
N LI + + E + +I RM Y L C +A +
Sbjct: 364 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 423
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ +KM +G P TY+ L+ C D A ++ ++ GV
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGV 468
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 16/281 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + G+ + GF ++ME + G + + + ++ G A+ ++K + +
Sbjct: 233 VNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----AYNCILDCVSKLCRK 284
+ + LLIKG+C K+DEA+++ R M E V AY ++D + +
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE---EAALVPDERAYGVLIDGYCRTGKI 348
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D RL E ++ G+ N+ N LI+ CK +A + RM +W P+
Sbjct: 349 DDAVRLLDEMLRL-------GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
++ L+ + E + D+M G Y L LC + + A+ ++
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M G PD Y L+ + A+ L+ + + G
Sbjct: 462 LMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 502
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 44/288 (15%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLD 250
GF + + + ++ LC+ G AE++ +KD PD LI G+C +
Sbjct: 502 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS--PDGITYRTLIDGYCKASNVG 559
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+A ++ M R YN + +S L + + RL E +L +M G+ N+
Sbjct: 560 QAFKVKGAMEREXISPSIEMYNSL---ISGLFKSR---RL-VEXTDLLTEMGIRGLTPNI 612
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI CK + A ++ M E G N ++ LY+ R+ E + ++ +
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672
Query: 371 MKSAGY---------------AIGKKD-----------------YYEFLTRLCGIERIEQ 398
M G+ AI K Y + LC +++
Sbjct: 673 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
A F + G PD+ TY L+ + A VD+A L DE +R G+
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGL 780
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 22/327 (6%)
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEVLGP---KTLASCIDRLVRAGRPTQVLGFFERMERDY 193
D + F L + +E P + + + I R VRA P++ F RME
Sbjct: 150 MIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYG 209
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
D +L ++ L + AS A+ + + PD + L+ WC G+L+EA+
Sbjct: 210 AGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLNEAE 269
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
R+ EM + G Y ++D + + + A+++L M +G P N TF
Sbjct: 270 RVFAEMQQAGVTPNVYTYTAVIDAMYRAGQV-------PRAQELLCQMIDSGCPPNTATF 322
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD-------E 366
N ++ K RSE +++ +M + GC P+ T+ L+++ G+G +
Sbjct: 323 NAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMET-----HCGKGQSNLDAAMK 377
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
M+ RM + G + L + + + A ++E+M+ P+ TY+LLM +
Sbjct: 378 MLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFN 437
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEY 453
+D + + GVE Y
Sbjct: 438 LEKSMDMVLRIKKDMDAQGVEPNVNTY 464
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 10/253 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF +D S ++E CE G A +L ++ PD L+KG C G+ +E
Sbjct: 194 GFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ---PDMYTHAALVKGLCDAGRGEEGL 250
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ ++M G+ T AY ++D CR++ EAEK+L +M +G+ V T
Sbjct: 251 CMLQKMKELGWRPTTRAYAALVDL---WCREQKA----EEAEKILNEMFDSGLMPCVVTC 303
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
++++ C+ R A+++F M GC PN T+ +++ A +V + ++D+M+
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRE 363
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + C I A + M+ +G D TY++L+ C +VD+
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423
Query: 434 ANALFDEAVRNGV 446
A +LFD G+
Sbjct: 424 ACSLFDGLEYRGI 436
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 21/297 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ A+ I+ AGR + L F M + D + +V+ LC+ G +++
Sbjct: 201 SYAALIEGFCEAGRIDEALELFREMTQP-----DMYTHAALVKGLCDAGRGEEGLCMLQK 255
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC---VSK 280
+ P + L+ WC + K +EA+++ EM+ G C++ C V+
Sbjct: 256 MKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL------MPCVVTCTIVVNA 309
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
CR+ R+ S A +V M + G NV T+N ++ C + A+ L +M E G
Sbjct: 310 YCREG---RM-SGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ T+ +LI+ +G ++ M+ G A + Y + LC ++++A
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
S+F+ ++ G P+S T++ ++ C + D A + + G P Y P
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAG--YAPDTYTYSP 480
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 121/278 (43%), Gaps = 11/278 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ R GR + + FE M R G + + + +V+ C G A L+ D
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESM-RFKGCEPNVWTYNAIVQGFCNAGKVYKAMALL-D 359
Query: 225 TANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E + PD +LLI+G C+DG + A RL R M G YN ++D LC
Sbjct: 360 QMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLID---ALC 416
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ ++D EA + +EY G+ N TFN +I+ LCK + + A M G
Sbjct: 417 KTG---KVD-EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYA 472
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ I++L + EG ID M +Y + RL A +
Sbjct: 473 PDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRI 532
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ +M + G +PD TY + +C R+D+A + E
Sbjct: 533 WGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE 570
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 130/326 (39%), Gaps = 36/326 (11%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T A+ + L AGR + L ++M ++ G++ + +V+ C A AEK++ +
Sbjct: 232 THAALVKGLCDAGRGEEGLCMLQKM-KELGWRPTTRAYAALVDLWCREQKAEEAEKILNE 290
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P C +++ +C +G++ A R+ M G E YN I V C
Sbjct: 291 MFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAI---VQGFCN 347
Query: 284 KKDPFR----LD---------------------------SEAEKVLLDMEYNGVPRNVET 312
++ LD A ++L ME NG+ + T
Sbjct: 348 AGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYT 407
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NVLI LCK + ++A LF + G PN TF +I L +A + ++ M
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMI 467
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
SAGYA Y F+ LC + ++ + ++M P + Y +++ +
Sbjct: 468 SAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYG 527
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPR 458
A ++ + V G Y R
Sbjct: 528 LATRIWGQMVSQGCSPDVVTYTTSVR 553
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 12/267 (4%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLI 240
+L F M R + ++ LC +A++ + + PD + LI
Sbjct: 112 MLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLI 171
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G+C +L+ A L +M GF V+Y +++ + R + L E +
Sbjct: 172 LGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ---- 227
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
++ T L+ LC R E+ + + +M E G P + L+ + +
Sbjct: 228 -------PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQK 280
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E +++++ M +G + C R+ A+ VFE M+ G P+ TY+
Sbjct: 281 AEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNA 340
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
++ +C +V KA AL D+ GVE
Sbjct: 341 IVQGFCNAGKVYKAMALLDQMRECGVE 367
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 121/346 (34%), Gaps = 71/346 (20%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-----ENGYASYAE 219
T + I+ L +AG+ F E M G+ D + +E LC + G E
Sbjct: 442 TFNTVINGLCKAGKFDVACTFLENM-ISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDE 500
Query: 220 KLVKDT----------ANEIF---------------------PDDKICDLLIKGWCVDGK 248
L KD N +F PD ++ +C +G+
Sbjct: 501 MLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGR 560
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
LDEA+ + EM + + +AYN ++D + + + A +L M GV
Sbjct: 561 LDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQT-------DRAVTILKHM--TGVAS 611
Query: 309 NVETFNVLI------------------SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
F I +++ K D +LF M + + T+L
Sbjct: 612 MPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLS 671
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+++ + R+ E ++ MK + + Y + C + A ++ M G
Sbjct: 672 ILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHG 731
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
P+ Y L++ A + D+A +F + + KEY D
Sbjct: 732 FLPNLIFYQYLLSGLTAEGQADRAKEIFRSS-------RWKEYNTD 770
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 18/293 (6%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A C DRL Q +G M R G + D + ++ LC+ A +L+ +
Sbjct: 124 ALCADRL-----ADQAVGLLRSM-RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
I P+ + L++G+C G+ ++ ++ EM G E V Y ++D + K+ + K
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+A V+ M G+ NV T+NVLI+ +CK ++AI + +M E G P+
Sbjct: 238 -------KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDV 290
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSV 402
T+ LIK L + E +++ M G I K + F + LC I R+ QA V
Sbjct: 291 VTYNTLIKGLSDVLEMDEAMWLLEEMVR-GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M+ G + TY+LL+ ++V KA L DE G+E Y +
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 21/296 (7%)
Query: 162 GPKTLASCIDRLVRA---GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
G A+C++R +R G T +L + RD S V+ LC G+ A
Sbjct: 44 GRAEAAACLNRHLRLLPLGEATSLLDALPSV-------RDAVSYNTVLTALCRRGHHDRA 96
Query: 219 EKLVKDTANE----IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
L++ + E P+ +L++ C D D+A L R M G V Y +
Sbjct: 97 GALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTL 156
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ LC D +D E ++ +M +G+ NV ++ L+ CK R ED K+F
Sbjct: 157 ---IRGLC---DAAEVDKAVE-LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFV 209
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M E G P+ + LI SL + + + ++D M G Y + +C
Sbjct: 210 EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEG 269
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+++A+ V +KM G PD TY+ L+ +D+A L +E VR VKP
Sbjct: 270 SVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKP 325
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 11/281 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+S + ++GR V F M + G + D +++ LC+ G A A ++
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMS-EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ P+ ++LI C +G + EA + ++M G V YN ++ +S
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLS------ 301
Query: 286 DPFRLDSEAEKVLLDM--EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D +D EA +L +M N V NV TFN +I LC I R A ++ M E GC
Sbjct: 302 DVLEMD-EAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +LI L + +V + E++D M S G Y + C + ++++A +
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
M+ G P+ Y L+ C +++A LF+E N
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN 461
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 131/313 (41%), Gaps = 45/313 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L + G+ + G + M R G + + + +++ +C+ G A ++K + +
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVR-RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG--FELGTVAYNCILDCVSKLCRKKD 286
+ PD + LIKG ++DEA L EM RG + V +N ++ + + R +
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
F++ + ME G N+ T+N+LI L ++ + A++L M G P+
Sbjct: 346 AFQVRAM-------MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF 398
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +LIK + +V ++++ M+ G Y L +C +E+A ++F +M
Sbjct: 399 TYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458
Query: 407 KTD----------------------------------GHNPDSETYDLLMTKWCAHNRVD 432
+ G PD+ TY +++ + ++
Sbjct: 459 DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDME 518
Query: 433 KANALFDEAVRNG 445
AN + + +G
Sbjct: 519 AANGVLKQMTASG 531
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR---NVETFNVLISNLCKIR 324
V+YN +L + LCR+ R A +L M P N ++ VL+ LC R
Sbjct: 77 AVSYNTVL---TALCRRGHHDR----AGALLRAMSLEPHPACRPNAVSYTVLMRALCADR 129
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
++ A+ L M G + T+ LI+ L AA V + E++ M +G Y
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
L C R E VF +M G PD Y L+ C + KA+ + D VR
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249
Query: 445 GVEVKPKEYRVDPRYLKKPIAVKKG 469
G+E Y V + K +VK+
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEA 274
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
F + F + DF D + K + + LV + F++ M R+ G
Sbjct: 103 FDSLRVFHKMKDFDCDPSQ----KAYVTVLAILVEENQLNLAFKFYKNM-REIGLPPTVA 157
Query: 201 SLRLVVEKLCEN-GYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
SL ++++ LC N G K+ + PD LI G C G++DEAK+L E
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M V Y + ++ LC K+ EA + + +M+ G+ NV T++ L+
Sbjct: 218 MVEKDCAPTVVTYTSL---INGLCGSKNV----DEAMRYVEEMKGKGIEPNVFTYSSLMD 270
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LCK RS A++LF M GC PN T+ LI L + ++ E E++DRM G
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
Y + ++ C + + +A + ++M G P+ T+++
Sbjct: 331 DAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNI 372
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 153/358 (42%), Gaps = 16/358 (4%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNAN-FSHTDETLSFFTDYFGRRKDFKAIHDFL 154
TPS V + + ++I F+ + AN + H + + FKA D +
Sbjct: 15 TPSQVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDIV 74
Query: 155 VDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
K V+ L S R RP L F +M +D+ + + V+ L E
Sbjct: 75 ARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM-KDFDCDPSQKAYVTVLAILVE 133
Query: 212 NGYASYAEKLVKDTANEIF--PDDKICDLLIKGWC-VDGKLDEAKRLAREMYRGGFELGT 268
+ A K K+ EI P ++LIK C DG +D ++ EM + G + +
Sbjct: 134 ENQLNLAFKFYKNM-REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDS 192
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
Y + +S LCR F EA+K+ +M V T+ LI+ LC + ++
Sbjct: 193 YTYGTL---ISGLCR----FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A++ M G PN T+ L+ L + R + E+ + M + G Y +T
Sbjct: 246 AMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC ++I++A+ + ++M G PD+ Y +++ +CA ++ +A DE + G+
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGI 363
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 11/211 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-ENGYASYAEKLVK 223
T +S +D L + GR Q + FE M G + + + ++ LC E E L +
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMM-MARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR 322
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL----DCVS 279
+ PD + +I G+C K EA EM GG + +N + + V
Sbjct: 323 MNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVR 382
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC S A + L M G+ VET + L+ LCK + A++L +
Sbjct: 383 GLCTN-----YPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTD 437
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
GC PN+ T+ +LI VGE + + R
Sbjct: 438 GCIPNKGTWKLLIGHTLDNTIVGEASDSLLR 468
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 128/317 (40%), Gaps = 56/317 (17%)
Query: 153 FLVDNKEVLGPKTLASCIDRLVRA-----GRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
F + +E+ P T+AS ++ L++A G L F M + G D + ++
Sbjct: 143 FYKNMREIGLPPTVAS-LNVLIKALCRNDGTVDAGLKIFHEMPK-RGCDPDSYTYGTLIS 200
Query: 208 KLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC G A+KL + + P LI G C +DEA R EM G E
Sbjct: 201 GLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEP 260
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
Y+ ++D LC KD L +A ++ M G N+ T+ LI+ LCK ++
Sbjct: 261 NVFTYSSLMD---GLC--KDGRSL--QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG----DEMI------DR------ 370
++A++L RM G P+ + +I ++ E DEMI +R
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIH 373
Query: 371 -------------------------MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
M+S G ++ + + LC ++A+ + ++
Sbjct: 374 VKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDE 433
Query: 406 MKTDGHNPDSETYDLLM 422
+ TDG P+ T+ LL+
Sbjct: 434 IVTDGCIPNKGTWKLLI 450
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 139/295 (47%), Gaps = 12/295 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY---AEKL 221
T + I+ L + G+ + + M + +GF + + +++ C+ G A+ +
Sbjct: 232 TFNTVINGLCKVGKLNKAGDVVDDM-KVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAI 290
Query: 222 VKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+K+ N++ P+ ++LI G+C D L A ++ EM G + V YN + V+
Sbjct: 291 LKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL---VNG 347
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC + +EA+ +L +M + + NV T+N LI+ CK + E+A +LF +G+ G
Sbjct: 348 LCNEGKL----NEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN TF L+ + ++ E + M G+ Y + C ++E+
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ +M+ G D+ TY++L++ WC KA L DE + G++ Y +
Sbjct: 464 NLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNI 518
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 4/207 (1%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+I P+ + +I G C GKL++A + +M GF V YN ++D K+ R
Sbjct: 225 KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKM 284
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
++ D+ +L +M N V N TFNVLI CK A+K+F M G P T
Sbjct: 285 YKADA----ILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ L ++ E ++D M S+ Y + C + +E+A +F+ +
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKA 434
G P+ T++ L+ +C ++++A
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEA 427
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 9/306 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ AI +V+NK T ID + + L FE M+ G K +
Sbjct: 282 GKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQ-GLKPTVVT 340
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+V LC G + A+ L+ + ++ + P+ + LI G+C L+EA+ L +
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ G + +N +L K + ++ F L +KV+L+ G N T+N LI
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLL----QKVMLE---KGFLPNASTYNCLIVGF 453
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C+ + E+ L M G + T+ +LI + + + +ID M G
Sbjct: 454 CREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSH 513
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L C + A+++ ++M+ +G + TY++L+ +C +++ AN L +E
Sbjct: 514 LTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNE 573
Query: 441 AVRNGV 446
+ G+
Sbjct: 574 MLEKGL 579
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 8/256 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++++ C++ S A K+ ++ ++ + P + L+ G C +GKL+EAK L EM
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ + YN + ++ C+KK L EA ++ ++ G+ NV TFN L+
Sbjct: 365 LSSNLKPNVITYNAL---INGYCKKK----LLEEARELFDNIGKQGLTPNVITFNTLLHG 417
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
CK + E+A L M E G PN +T+ LI + ++ E +++ M+ G
Sbjct: 418 YCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKAD 477
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y ++ C + ++A + ++M G P TY++L+ +C + A L
Sbjct: 478 TVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRK 537
Query: 440 EAVRNGVEVKPKEYRV 455
+ + G Y V
Sbjct: 538 QMEKEGRWANVVTYNV 553
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG--- 362
+ N+ TFN +I+ LCK+ + A + M WG PN T+ LI + RVG
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ D ++ M + + + C E + A+ VFE+M++ G P TY+ L+
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 423 TKWCAHNRVDKANALFDEAVRNGVE 447
C ++++A L DE + + ++
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLK 370
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 34/153 (22%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P+ + LI G+C +GK++E K L EM G + TV YN + +S C KK+P +
Sbjct: 440 LPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNIL---ISAWCEKKEPKK 496
Query: 290 ----LDSEAEK----------VLLD-----------------MEYNGVPRNVETFNVLIS 318
+D +K +LL+ ME G NV T+NVLI
Sbjct: 497 AARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQ 556
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
C+ + EDA L M E G PN TT+ ++
Sbjct: 557 GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 210 CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
C G A + + A E D CD LI+G C G+ A + EM R V
Sbjct: 139 CGAGQVDAARRWCAERAVE--RDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVV 196
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
Y +L+ K K +A K+L +M G ++ T+NV+++ +C+ R +DA
Sbjct: 197 TYTILLEATCKRSGYK-------QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 249
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
I+ + +GC PN ++ +++K L A R + +E++ M G + ++
Sbjct: 250 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 309
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
LC +E A+ V E++ G +P+S +Y+ L+ +C ++DKA A D V G
Sbjct: 310 LCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 365
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 133/282 (47%), Gaps = 13/282 (4%)
Query: 171 DRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
D L+R GR L + M R D + +++E C+ A KL+ +
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVP-DVVTYTILLEATCKRSGYKQAMKLLDEMR 222
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
++ PD ++++ G C +G++D+A + + G E TV+YN +L + R +
Sbjct: 223 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 282
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D AE+++ +M G P NV TFN+LIS LC+ E A+++ ++ ++GC PN
Sbjct: 283 D-------AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNS 335
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
++ L+ + + ++ + +D M S G Y LT LC ++ A+ + +
Sbjct: 336 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 395
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+K G P +Y+ ++ + +A L +E V G++
Sbjct: 396 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 437
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 8/248 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
+RD + ++ LC G + A ++ + PD +L++ C +A
Sbjct: 155 AVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQA 214
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L EM G V YN + V+ +C++ R+D +A + L ++ G N +
Sbjct: 215 MKLLDEMRDKGCTPDIVTYNVV---VNGICQEG---RVD-DAIEFLKNLPSYGCEPNTVS 267
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N+++ LC R EDA +L MG+ GC PN TF +LI L + V E+++++
Sbjct: 268 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 327
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G + Y L C +++++AM+ + M + G PD +Y+ L+T C VD
Sbjct: 328 KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 387
Query: 433 KANALFDE 440
A L +
Sbjct: 388 VAVELLHQ 395
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 146/323 (45%), Gaps = 11/323 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + + GR + F + + YG + + S +V++ LC AE+L+ + +
Sbjct: 237 VNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 295
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + + ++LI C G ++ A + ++ + G +++YN +L C++K
Sbjct: 296 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLL---HAFCKQK--- 349
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D +A L M G ++ ++N L++ LC+ + A++L +++ + GC P ++
Sbjct: 350 KMD-KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY 408
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L +A + E E+++ M S G Y LC +RIE A+ F K++
Sbjct: 409 NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 468
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
G P++ Y+ ++ C A LF + NG Y + L +K+
Sbjct: 469 MGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKE 528
Query: 469 GKKRETLPEKMARKRRRLKQIRL 491
R+ L E +R L + L
Sbjct: 529 A--RDLLDELCSRGEEILLDVHL 549
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 18/258 (6%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA- 256
D + +++KL +G + A +++ PD + ++ G+C G++D A+R
Sbjct: 97 DAGTCAALIKKLSASGRTAEARRVLAACG----PDVMAYNAMMAGYCGAGQVDAARRWCA 152
Query: 257 -REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
R + R + T+ + LC + + A VL +M +V T+ +
Sbjct: 153 ERAVERDAYTCDTL--------IRGLCGRGRT----ANALAVLDEMLRRRCVPDVVTYTI 200
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ CK + A+KL M + GC P+ T+ V++ + Q RV + E + + S G
Sbjct: 201 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 260
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y L LC ER E A + +M G P+ T+++L++ C V+ A
Sbjct: 261 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 320
Query: 436 ALFDEAVRNGVEVKPKEY 453
+ ++ + G Y
Sbjct: 321 EVLEQIPKYGCSPNSLSY 338
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 95/252 (37%), Gaps = 53/252 (21%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD C LIK G+ EA+R+ + G ++ +AYN ++ + R
Sbjct: 96 PDAGTCAALIKKLSASGRTAEARRV---LAACGPDV--MAYNAMMAGYCGAGQVDAARRW 150
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+E V R+ T + LI LC R+ +A+ + M C P+ T+ +
Sbjct: 151 CAE----------RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTI 200
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+++ K +GY +QAM + ++M+ G
Sbjct: 201 LLEA---------------TCKRSGY--------------------KQAMKLLDEMRDKG 225
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
PD TY++++ C RVD A G E Y + LK ++ +
Sbjct: 226 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI---VLKGLCTAERWE 282
Query: 471 KRETLPEKMARK 482
E L +M +K
Sbjct: 283 DAEELMGEMGQK 294
>gi|357166306|ref|XP_003580667.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Brachypodium distachyon]
Length = 441
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 18/334 (5%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQ--NANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
+ V TL+ R L F HW AN T TLS D G+ +F L+
Sbjct: 35 AAVLETLSLYTNDWRRALDFFHWSASPAGANLPPTAATLSRAIDILGKHFEFPLATSLLL 94
Query: 156 DNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ + P L + ++RL A + FE G RD+ S L+++ LC+
Sbjct: 95 SHHDPSDPAFLRPALRALLNRLAAANLVDDAVRVFESTAGSIGL-RDEASFHLLIDALCD 153
Query: 212 NGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ A L A FP K +LL++GW ++ +M G +
Sbjct: 154 HRRVDEAHHLCFGKAPPPFPPGTKTHNLLLRGWAKTRAWTRLRQHWFDMDNRGVAKDLHS 213
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y+ +D ++K P++ A KV +M+ +P ++ +N I + + + ++
Sbjct: 214 YSIYMDALAK---SGKPWK----AVKVFKEMKQKRLPVDIVAYNTAIHAIGLAQGVDFSV 266
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+L+ +M + GC PN TF ++K L + R EG + +M AG Y+ F L
Sbjct: 267 RLYRQMVDAGCKPNTATFNTIVKLLCKEGRFREGYAFVQQMHKAGCEPNVLTYHCFFQYL 326
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
R ++ + +FEKM G P +TY +L+ +
Sbjct: 327 ---SRPQEVLVLFEKMLERGCRPRMDTYVMLIKR 357
>gi|242074540|ref|XP_002447206.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
gi|241938389|gb|EES11534.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
Length = 446
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 145/354 (40%), Gaps = 18/354 (5%)
Query: 79 PLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQ--NANFSHTDETLSF 136
P P S + S V TL+ R L F HW AN T TL+
Sbjct: 21 PAPASNPTPTPTPPSSLDASAVLETLSLYANDWRRALDFFHWSASPTGANLPPTAATLAR 80
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERD 192
D G+ +F L+ + + P L + ++RL A L F+
Sbjct: 81 AVDILGKHFEFPLATSLLLSHHDPEDPAFLRPALRALLNRLAAANLVDDALRAFDSTAAS 140
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDE 251
G RD+ S L+V+ LC++ A+ L F P K +LL++GW
Sbjct: 141 IGL-RDEASFHLLVDALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKTRAWAR 199
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
++L +M R G +Y+ +D ++K + F KV +M+ GV +
Sbjct: 200 LRQLWFDMDRRGVAKDLHSYSIYMDALAKSGKPWKTF-------KVFKEMKQKGVRIDTV 252
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+N I + + + A++L+ +M + GC PN T+ ++K + R EG + +M
Sbjct: 253 AYNTAIHAVGLAQGVDSAVRLYRQMVDAGCKPNTATYNGIVKLFCKEGRFKEGYAFVQQM 312
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
G Y+ F L R ++ + +FEKM G P +TY +L+ ++
Sbjct: 313 HKTGCKPDVLTYHCFFQFL---SRPQEVLGLFEKMLERGCQPRMDTYVMLIKRF 363
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 57/365 (15%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD---YG--FKRDKDSLRLVVEKLCENGYASYAE 219
T + + L R G + L + M D YG FK S ++++ LC++
Sbjct: 203 TYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR----- 257
Query: 220 KLVKDTANEIFPDDKICDL---------LIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+D A ++F + K+ + LI G+C GK +EAKRL EM G + V
Sbjct: 258 ---EDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVT 314
Query: 271 YNCILDCV---SKLCRKKDPFRLD-------------------------SEAEKVLLDME 302
+N ++D + K+ KD + + A ++ + M
Sbjct: 315 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP 374
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G +V + VLI+ CK + E+A+KL+ M + G P+ T+ L+ L+Q +VG
Sbjct: 375 SKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVG 434
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ ++ MK G Y FL LC + +AM +F K+K+ D E ++ L+
Sbjct: 435 DAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLI 494
Query: 423 TKWCAHNRVDKANALFDEAVRNGVE-------VKPKEYRVDPRYLKKPIAVKKGKKRETL 475
C +++ A LF++ + ++ + E+ + +K I +K +K
Sbjct: 495 DGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCT 554
Query: 476 PEKMA 480
P+K+
Sbjct: 555 PDKIT 559
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 169/452 (37%), Gaps = 81/452 (17%)
Query: 50 TSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPE 109
S KT+ ++ +LS L + P S H + ++ +LN SP+
Sbjct: 2 ASTSKTVPSASSIVKPNLSSSLFTHSPTIP---SSNPHF-------SSAVHHKSLNVSPQ 51
Query: 110 AGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGP--KTLA 167
+ F L+ F H +T + F+ H + N P +
Sbjct: 52 NFNTPISFQQQLSM---FLHNCKT-----GNITATQAFQFFHLMMYSNPT---PPLSSFT 100
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-----NGYASYAEKLV 222
+ L + +QV + +M R G D +L +++ LC G A A L
Sbjct: 101 HLLSGLAKIKHYSQVFYLYNQM-RLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILR 159
Query: 223 KDTANEIFPDDKICDLLIKGWCVD-----------------------------------G 247
+ PD LIKG C++ G
Sbjct: 160 RG----YIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215
Query: 248 KLDEAKRLAREM------YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
+ A +L +EM Y F+ ++Y+ I+D LC+ R + EA + +M
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIID---ALCKD----RREDEARDLFEEM 268
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
+ G+ V ++ LI C + E+A +LF M G PN TF VLI L + +V
Sbjct: 269 KVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKV 328
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E ++++ M G Y + C + + A +F M + G PD Y +L
Sbjct: 329 IEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVL 388
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +C ++V++A L++ ++ G K Y
Sbjct: 389 INGYCKTSKVEEAMKLYNGMLQVGKRPDVKTY 420
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 12/282 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY---AEKLVKDT- 225
I+ L +AG+ + E + + +GF + + +++ C+ G A A+ ++K+
Sbjct: 207 INGLCKAGKLNKAEDVIEDI-KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEML 265
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
AN+I P++ + LI G+C D + AK EM R G + V YN +++ +S
Sbjct: 266 ANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLS------ 319
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ +LD EA + M G+ N+ TFN LI+ CK + ++A KLF + E PN
Sbjct: 320 NNGKLD-EAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNA 378
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
TF +I + +A + EG + + M G Y + LC + + A + +
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNE 438
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M+ D TY++L+ WC KA L E + GV+
Sbjct: 439 MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVK 480
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 9/258 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ L G+ + + +++M G K + + ++ C+ A KL D
Sbjct: 310 TYNSLINGLSNNGKLDEAIALWDKM-VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD 368
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + + P+ + +I +C G ++E L M G YNC+ ++ LCR
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCL---IAGLCR 425
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ A+K+L +ME + +V T+N+LI CK A KL M G P
Sbjct: 426 NQNV----RAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKP 481
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ L+ + ++ +M+ G Y + C ++E A +
Sbjct: 482 NHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLL 541
Query: 404 EKMKTDGHNPDSETYDLL 421
+M G NP+ TYD++
Sbjct: 542 NEMLEKGLNPNRTTYDVV 559
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 31/303 (10%)
Query: 170 IDRLVRAGRPTQ-VLGFFERMERD----YGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+D+L AG ++ VL FF+ +++ YG + L L+ + S+ +KLVK+
Sbjct: 48 LDQLFNAGVDSELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKN 107
Query: 225 ---TANEIF-----------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
T + +F + I D+L+ + + ++ A + R + GF+L +
Sbjct: 108 EKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNS 167
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
N +L S L + + E + V +M + N+ TFN+ I+ LCK + A
Sbjct: 168 CNPLL---SALVKGNET----GEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAE 220
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE---GDEMIDRMKSAGYAIGKKDYYEFL 387
+ + WG PN T+ LI + G+ D ++ M + + + +
Sbjct: 221 DVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLI 280
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C E + A + FE+M+ G P+ TY+ L+ + ++D+A AL+D+ V G+
Sbjct: 281 DGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV--GLG 338
Query: 448 VKP 450
+KP
Sbjct: 339 LKP 341
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 129/308 (41%), Gaps = 9/308 (2%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
AI ++ NK T + ID + FE M+R G K + + ++
Sbjct: 259 AILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQ-GLKPNIVTYNSLING 317
Query: 209 LCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
L NG A L K + P+ + LI G+C + EA++L ++
Sbjct: 318 LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPN 377
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ +N ++D K ++ F L + +LD G+ NV T+N LI+ LC+ +
Sbjct: 378 AITFNTMIDAFCKAGMMEEGFALHNS----MLD---EGIFPNVSTYNCLIAGLCRNQNVR 430
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A KL M + + T+ +LI + + ++++ M + G Y +
Sbjct: 431 AAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLM 490
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C ++ A+ V +M+ +G + TY++L+ +C +++ AN L +E + G+
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLN 550
Query: 448 VKPKEYRV 455
Y V
Sbjct: 551 PNRTTYDV 558
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 7/218 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LI G+C +DEA L +EM++ TV Y+ ++D + K R +
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVW 642
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L E M G P +V T+N LI LCK + AI LF +M + G PN TF
Sbjct: 643 DLIDE-------MRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTF 695
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ L + R+ + E+ + + GY + Y + C +E+A+++ KM+
Sbjct: 696 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEE 755
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+G P++ T+D+++ + DKA L + + G+
Sbjct: 756 NGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 142/343 (41%), Gaps = 30/343 (8%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ K HD L+ L + A+ I+ + + G + +++ K + +
Sbjct: 391 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLT-KPNVEM 449
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC+ S A L + T I D LI G+C+ GKL EA L EM
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509
Query: 261 RGGFELGTVAYNCILDCVSK----------------LCRKKDPFRLDS------------ 292
Y ++D + K C K D F ++
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A+ V M GV +V T+ +LI+ CK + ++A+ LF M + P+ T+ L+
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L ++ R+ ++ID M+ G Y + LC +++A+++F KMK G
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR 689
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P++ T+ +L+ C R+ A +F + + G + Y V
Sbjct: 690 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNV 732
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS---------KL 281
PD + LIKG C+ G++ EA ++ GF+L V+Y +++ V K
Sbjct: 61 PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120
Query: 282 CRKKD-------------------PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
RK D ++L SEA + +M G+ NV T++ LI C
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ + ++A+ L M +PN T+ +L+ +L + +V E ++ M A
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + + +++A VF M G PD +Y++++ +C RVDKA LF E +
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 8/225 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +++I G+C ++D+A L +EM F + +N ILD +K+
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFP-PIIQFNKILDSFAKMKHYSTAV 327
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L +E G+ ++ T N+LI+ C + + + ++ + G P+ T
Sbjct: 328 SLSHR-------LELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTL 380
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LIK L +V + D++ + G+ + + Y + +C I A+ + K+
Sbjct: 381 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG 440
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ E Y ++ C + V +A LF E G+ Y
Sbjct: 441 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 485
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
TL + I L G+ + L F +++ GF+ ++ S ++ +C G A K ++
Sbjct: 65 TLNTLIKGLCLKGQVKEALHFHDKLLAQ-GFQLNQVSYATLINGVCRIGDTRAAIKFLRK 123
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ ++ + +I C + EA L EM G V Y+ ++ + +
Sbjct: 124 IDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGK 183
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA +L M + NV T+N+L+ LCK + ++A + M +
Sbjct: 184 LK-------EALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKS 236
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ L+ + V + + + M G Y + C I+R+++A+++F
Sbjct: 237 NVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLF 296
Query: 404 EKM 406
++M
Sbjct: 297 KEM 299
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 6/183 (3%)
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+ + VL + G P + T N LI LC + ++A+ ++ G N+ ++
Sbjct: 44 DAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYAT 103
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD---YYEFLTRLCGIERIEQAMSVFEKMK 407
LI + R+G+ I ++ + K + Y + LC + + +A +F +M
Sbjct: 104 LINGV---CRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVK 467
G + + TY L+ +C ++ +A L + V + Y + L K VK
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220
Query: 468 KGK 470
+ K
Sbjct: 221 EAK 223
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 323 IRRSEDAIKL--FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
I+ +DA+ L ++ + G P+ T LIK L +V E D++ + G+ + +
Sbjct: 39 IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + +C I A+ K+ P+ E Y+ ++ C + V +A LF E
Sbjct: 99 VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158
Query: 441 AVRNGVEVKPKEY 453
G+ Y
Sbjct: 159 MTVKGISANVVTY 171
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 181/447 (40%), Gaps = 36/447 (8%)
Query: 34 PTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHV 93
P + F+SK S+P + + ++ L+ L + ++P L H
Sbjct: 6 PKLHALFVSK---SQPVLRAAKVTNEERSTKSKLARSLARAVNSNPWSDELESSLSSLHP 62
Query: 94 TPTPS--LVQSTLNF--SPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA 149
+ T S V TL P G L F W++ N FSH +++ ++ GR ++
Sbjct: 63 SQTISRTTVLQTLRLIKVPADG---LRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNV 118
Query: 150 IHDFLVD-----NKEV-LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLR 203
+FL N V L + S I AG + + F+ M + G +
Sbjct: 119 ARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTM-KQMGISPSVLTFN 177
Query: 204 LVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ L + G A L + + PD + LI G+C + +DEA R+ ++M
Sbjct: 178 SLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMEL 237
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM--EYNGVPRNVETFNVLISN 319
V YN I+D LCR A VL M + V NV ++ L+
Sbjct: 238 YHCNPDVVTYNTIID---GLCRAGKV----KIAHNVLSGMLKKATDVHPNVVSYTTLVRG 290
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA--GYA 377
C + ++A+ +F+ M G PN T+ LIK L +A R E +++ A +A
Sbjct: 291 YCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA 350
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ + C ++ AM VF++M +PDS +Y +L+ C N D+A L
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 438 FDEAVRNGV-----EVKPKEYRVDPRY 459
F+E V E KP +P +
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMF 437
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 10/239 (4%)
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
E LC NG AEK+ + D LI G C +GK A L M R F
Sbjct: 438 EYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVP 497
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
Y ++D + K+ L + + +L Y V TF+ +++ L K + +
Sbjct: 498 DLETYELLIDGLLKIGEA----LLAHDTLQRMLRSSYLPVA---TTFHSVLAELAKRKFA 550
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++ L M E N +++ L+ +A+ + ++ + GY + + E
Sbjct: 551 NESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKME---EL 607
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L LC ++ A ++ D +T + ++ C H R +A +L++E V G
Sbjct: 608 LGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 12/274 (4%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKI 235
G+ + ++ F+ + R G++ + ++ L + A EK + PDD
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
++++G C G+LD+AK L ++ G +L + Y+ ++D K R D A
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDD-------AL 128
Query: 296 KVLLDMEYNG--VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
++ M G VP +V TFN L+ LC R +A LF M + GC PN ++ L+
Sbjct: 129 EIFKTMSSGGGCVP-DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLD 187
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L +A R+ E + + M Y F+T LC R+ +A KM T G
Sbjct: 188 GLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKA 247
Query: 414 DSETYDLLMTKWCAHNRVDKA-NALFDEAVRNGV 446
D+ + ++ C ++A N + + R+G+
Sbjct: 248 DAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGM 281
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 33/300 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-----EKLVK- 223
+ L +A R + +M G K D + V+ LC+ G+A A E L +
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTK-GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRS 279
Query: 224 ---DTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREM-----YRGGFEL 266
D A + F P ++ + LI C +L + L + M + L
Sbjct: 280 GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL 339
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
T YN ++D LC+ K +LD EA++++ +M G+ +V T++ L+ LCK+ +
Sbjct: 340 ET--YNIMVD---NLCKAK---QLD-EAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+ A L M + G P+ T ++ +L +A +V ++ MK+ G Y
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L LC RI++A++ KM PD +Y +++T C + A+A+F E V+ GV
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGV 510
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 179 PTQVLGFFERME--RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKI 235
P VL F+RM+ +++ + ++ ++V+ LC+ A++LV + AN + PD
Sbjct: 318 PDGVL-LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
L+ G C GKLD A L EM + G + IL+ +SK K + L
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK--AGKVDYALSH--- 431
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
L M+ G ++ T+N L+ LCK R ++AI +M C P+ ++ ++I +L
Sbjct: 432 --LETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITAL 489
Query: 356 YQAARVGEGDEMIDRMKSAGY-----------------------------AIGKKDYYE- 385
++ + + M G ++ K D+
Sbjct: 490 CRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMH 549
Query: 386 --FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
L LC + E A V E+M G D+ TY +++ +VDKA L D+A
Sbjct: 550 KMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASE 609
Query: 444 NGVEVK 449
V+
Sbjct: 610 THTSVE 615
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +V T+N + L K + A + F +M G P++ T+ ++++ L +A + +
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN-PDSETYDLLMT 423
E++ +++ +G + Y + C R++ A+ +F+ M + G PD T++ L+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152
Query: 424 KWCAHNRVDKANALFDEAVRNGVE 447
C+ R+ +A LF+ + G E
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCE 176
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVK 223
T AS ++ L +AG+ L E M + G D + +++ LC+ G A L K
Sbjct: 411 TDASILNALSKAGKVDYALSHLETM-KARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + PD ++I C G+ A + +EM + G TV Y+ +LD +++
Sbjct: 470 MVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR--- 526
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ E + L++ + + + +++ LCK ++EDA ++ RM + G
Sbjct: 527 --------NGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFP 578
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMID 369
+ T++ ++ L + +V + +++D
Sbjct: 579 ADAFTYISVVSGLRKLGKVDKARQLVD 605
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 16/302 (5%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
++A+HD P+ ID L+R V+ ++ M +D G + + L+V
Sbjct: 114 YRAVHDL--GCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKD-GVHPNVFTYNLLV 170
Query: 207 EKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
LC+N A K++ + A + PDD ++ C +LDEA + M
Sbjct: 171 RALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----P 225
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+YN I V LCR+ FR+ E V+ DM G+ NV T+ ++ CK
Sbjct: 226 PVAASYNAI---VLALCRE---FRMQ-EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGE 278
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
A + RM GC PN TF L++ L+ RV + +M M + G+A Y
Sbjct: 279 LRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNI 338
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LC + ++ A S+ M+ G P+ TY L+ + + A +++++ R+G
Sbjct: 339 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 398
Query: 446 VE 447
+
Sbjct: 399 CK 400
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L GR L + M + G+ S +++ LC G A ++
Sbjct: 300 TFTALVRGLFDDGRVHDALDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNS 358
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
FP+ + LI G+ G L A + +M R G + V Y ++D C+
Sbjct: 359 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD---VFCK 415
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K + S +K+LL+ P N TFN LI +LC RR A+ +F+ M GC P
Sbjct: 416 KLMFNQAKSLIDKMLLE----NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVP 471
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L++ G+ M+ M+S G + Y ++ LC +AM
Sbjct: 472 NGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFV 531
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
KM G P++ T+ ++ +C V A
Sbjct: 532 GKMIVQGIQPNAFTFSAIIHAYCKEGEVRMA 562
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + + + +V+ C+ G A L + P+ L++G DG++ +A
Sbjct: 258 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 317
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ R M G+ TV+YN + + LC D A +L ME +G NV T
Sbjct: 318 LDMWRWMVAEGWAPSTVSYNIL---IRGLCSVGDL----KGASSILNSMEQHGCFPNVRT 370
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LI K AI ++ M GC PN + ++ + + +ID+M
Sbjct: 371 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 430
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ + LC R+ +A+ VF +M+ G P+ TY+ L+
Sbjct: 431 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 490
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A + E +G+E+ Y
Sbjct: 491 DALHMVTEMQSHGIELSLVTY 511
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T ++ ID +AG + + M R G K + +V+ C+ + A+ L+
Sbjct: 369 RTYSTLIDGFSKAGDLGGAISIWNDMSRS-GCKPNVVVYTNMVDVFCKKLMFNQAKSLID 427
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E P + + + LI+ C ++ A + EM R G YN + + L
Sbjct: 428 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYN---ELIHGLF 484
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R+ + +A ++ +M+ +G+ ++ T+N ++S LC+ R S +A+ +M G
Sbjct: 485 REGNC----GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 540
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN TF +I + + V M+ M Y + LC +++ AM+
Sbjct: 541 PNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 600
Query: 403 FEKMKTDGHNPDSETYDLLM 422
KM +G P++ T+++L+
Sbjct: 601 LLKMLYEGIYPNTVTWNVLV 620
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 107/284 (37%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D +AG RM G + + +V L ++G A + +
Sbjct: 265 TYTTIVDAFCKAGELRMACAILARMVIT-GCTPNVVTFTALVRGLFDDGRVHDALDMWRW 323
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E + P ++LI+G C G L A + M + G Y+ ++D SK
Sbjct: 324 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSK--- 380
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D A + DM +G NV + ++ CK A L +M C P
Sbjct: 381 AGDL----GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 436
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF LI+SL RVG + M+ G + Y E + L A+ +
Sbjct: 437 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 496
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+M++ G TY+ +++ C +A + + G++
Sbjct: 497 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 540
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 30/329 (9%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFE 187
+T S G+R+D ++ L+ E LG K T CI L RAG+ + +
Sbjct: 224 QTYSSLMVGLGKRRDIDSVMG-LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF---------PDDKICDL 238
RM+ D G D + ++++ LC A KL D A E+F PD
Sbjct: 283 RMD-DEGCGPDVVTYTVLIDALCT------ARKL--DCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ + + LD K+ EM + G V + ++D LC+ + EA L
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD---ALCKAGNF----GEAFDTL 386
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G+ N+ T+N LI L ++ R +DA++LF M G P T++V I ++
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
E ++MK+ G A L L R +A +F +K G PDS TY
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+++M + +D+A L E + NG E
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 134/313 (42%), Gaps = 17/313 (5%)
Query: 156 DNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
D +L P SC V R FE+ +D G + + L++ L E
Sbjct: 747 DGDSILVPIIRYSCKHNNVSGART-----LFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 801
Query: 216 SYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A+ + VK T PD + L+ + GK+DE L +EM E T+ +N
Sbjct: 802 EIAQDVFLQVKSTG--CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ + K D L + ++ D +++ P T+ LI L K R +A +L
Sbjct: 860 IVISGLVKAGNVDDALDLYYD---LMSDRDFS--PTAC-TYGPLIDGLSKSGRLYEAKQL 913
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M ++GC PN + +LI +A + RM G K Y + LC
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+ R+++ + F+++K G NPD Y+L++ +R+++A LF+E ++ + P
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE-MKTSRGITPDL 1032
Query: 453 YRVDPRYLKKPIA 465
Y + L IA
Sbjct: 1033 YTYNSLILNLGIA 1045
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+ K V G L +A R+M GF L +YN ++ + K R +EA +V
Sbjct: 159 IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLK-------SRFCTEAMEVY 211
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G +++T++ L+ L K R + + L M G PN TF + I+ L +A
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ E E++ RM G Y + LC +++ A VFEKMKT H PD TY
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+ ++ + +D + E ++G
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 9/277 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVK 223
T + I L+R R L F ME G K + + ++ ++G S E K
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNME-SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I P+ C+ + G+ EAK++ + G +V YN ++ C SK+
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
EA K+L +M NG +V N LI+ L K R ++A K+F RM E P
Sbjct: 519 I-------DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ L+ L + ++ E E+ + M G + LC + + A+ +
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
KM G PD TY+ ++ + +V +A F +
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 136/325 (41%), Gaps = 20/325 (6%)
Query: 130 TDETLSFFTDYFGRRKD-FKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFF 186
T T F DY+G+ D A+ F + + P +A + + L +AGR + F
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCV 245
+ +D G D + ++++ + G A KL+ + N PD + + LI
Sbjct: 492 YGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
++DEA ++ M + V YN +L + K + + EA ++ M G
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ-------EAIELFEGMVQKG 603
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
P N TFN L LCK A+K+ ++M + GC P+ T+ +I L + +V E
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEK-MKTDGHNPDSETYDLL 421
+MK Y D+ T L G+ + IE A + + P + ++ L
Sbjct: 664 CFFHQMKKLVYP----DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 422 MTKWCAHNRVDKANALFDEAVRNGV 446
+ A +D A + + V NG+
Sbjct: 720 IGSILAEAGIDNAVSFSERLVANGI 744
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L N E LG K T ID ++G L FE+M+ G + + + L
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GIAPNIVACNASLYSL 478
Query: 210 CENGYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ G A+++ +KD + PD ++++K + G++DEA +L EM G E
Sbjct: 479 AKAGRDREAKQIFYGLKDIG--LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+ N +++ + K R+D EA K+ + M+ + V T+N L++ L K +
Sbjct: 537 DVIVVNSLINTLYK------ADRVD-EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++AI+LF M + GC PN TF L L + V +M+ +M G Y
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 387 LTRLCGIERIEQAMSVFEKMK 407
+ L ++++AM F +MK
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMK 670
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 43/258 (16%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ID L ++GR + FE M DYG + + +++ + G A A L K
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGM-LDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E + PD K +L+ C+ G++DE +E+ G V YN I++ + K R
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ L +E + G+ ++ T+N LI NL E+A K++ + G P
Sbjct: 1012 LEEALVLFNEMKTS------RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF LI+ GY++ K E A +V+
Sbjct: 1066 NVFTFNALIR---------------------GYSLSGKP--------------EHAYAVY 1090
Query: 404 EKMKTDGHNPDSETYDLL 421
+ M T G +P++ TY+ L
Sbjct: 1091 QTMVTGGFSPNTGTYEQL 1108
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 128/337 (37%), Gaps = 47/337 (13%)
Query: 121 LTQNANFSHTDETLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAG 177
+ N N HT ET ++ + G+ ++ + D + T + L G
Sbjct: 108 VAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKG 167
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKIC 236
Q +M R++GF + S ++ L ++ + + A ++ + E F P +
Sbjct: 168 GLKQAPYALRKM-REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
L+ G +D L +EM G + + C+ L R +EA +
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI---CIRVLGRAGKI----NEAYE 279
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIR-------------------------------- 324
+L M+ G +V T+ VLI LC R
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339
Query: 325 --RSEDAIKLFYRMGEWGCH-PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
R D++K F+ E H P+ TF +L+ +L +A GE + +D M+ G
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
Y + L + R++ A+ +F M++ G P + TY
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 12/268 (4%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDL 238
T+VL R + G + D + ++++ C++ A KL D + F PD + +
Sbjct: 497 TEVL----RTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNS 552
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I +C GK++EA L +M G + V+Y I+D C+ KD +A + L
Sbjct: 553 IIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIID---GYCKAKDI----QKANEYL 605
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
++ G+ N +N LI + AI + M G P T+ L+ + A
Sbjct: 606 NELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHA 665
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
V E M ++ + +G Y + LC I ++++AM+ FE+M++ P+ TY
Sbjct: 666 GLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITY 725
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
LM +C ++A+ LFDE V +G+
Sbjct: 726 TTLMYAYCKSGNNEEASKLFDEMVSSGI 753
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 24/287 (8%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD----- 224
ID R G T+ + F+ M K + L+ LC+ G AE+++++
Sbjct: 343 IDWHCRKGHFTEAIRLFDEMVSKE-MKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T + + + LL + G+L+ RL EM + G + C +LC+
Sbjct: 402 MTIHSGLFNSVVAGLLQR----TGRLESVVRLISEMVKRGMKPNDALMTA---CTKQLCQ 454
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R EA + L M G+ N+ T N LI LC+ + + A ++ M G
Sbjct: 455 G----RRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL 510
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAM 400
+ T+ ++I+ + +++ E ++ D M G+ K D Y F + C + ++E+A+
Sbjct: 511 DNITYNIMIQGCCKDSKIEEALKLRDDMIRKGF---KPDAYMFNSIIHAYCDLGKMEEAL 567
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ +MK +G PD +Y ++ +C + KAN +E + G++
Sbjct: 568 HLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLK 614
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 10/226 (4%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P++ IC+ LI C G EA RL EM + V YN I LC++ +
Sbjct: 332 ITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLI---ARALCKEGEME 388
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC-KIRRSEDAIKLFYRMGEWGCHPNETT 347
R AE++L +M G+ + FN +++ L + R E ++L M + G PN+
Sbjct: 389 R----AERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDAL 444
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
K L Q R E + +M G I + LC + ++ A V M
Sbjct: 445 MTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMV 504
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G D+ TY++++ C +++++A L D+ +R G KP Y
Sbjct: 505 NKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKG--FKPDAY 548
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 9/284 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFP 231
L R GR V+ M + G K + + ++LC+ A + +K +
Sbjct: 417 LQRTGRLESVVRLISEMVK-RGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCI 475
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ + LI G C + A + R M G EL + YN ++ + C K
Sbjct: 476 NIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMI----QGCCKDSKIE-- 529
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA K+ DM G + FN +I C + + E+A+ L +M G P+ ++ +
Sbjct: 530 -EALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTI 588
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I +A + + +E ++ + + G Y + I A+ V + M++ G
Sbjct: 589 IDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGI 648
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P + TY LM C VD+A +F+++ +N +EV Y +
Sbjct: 649 QPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTI 692
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 14/223 (6%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV-----AYNCILDCVSKLCRKK 285
P K C+ L++ G L ++ EM + TV +Y ++ + K+ +
Sbjct: 191 PSVKTCNALLEALARTGNLGATCKVFDEMR----DCKTVTPNGYSYTSMIKALCKVGKVD 246
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D F++ S+ L VP +N+L+ LCK R ++AI+L RM E P+
Sbjct: 247 DGFKILSDLIHAGLQQSAGAVP-----YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSM 301
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
TF +LI L ++ R GE ++ M+ G + E + C +A+ +F++
Sbjct: 302 VTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDE 361
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
M + + TY+L+ C +++A + +E + G+ +
Sbjct: 362 MVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTI 404
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 107/254 (42%), Gaps = 12/254 (4%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKI 235
G+ + L +M+ + G + D S +++ C+ A + + + A + P+ I
Sbjct: 561 GKMEEALHLLGQMKIE-GVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVI 619
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ LI G+ +G + A + M G + V Y C L + +C L EA+
Sbjct: 620 YNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTY-CSL--MHWMCHAG----LVDEAK 672
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+ N + V + ++I LCKI + ++A+ F M PN+ T+ L+ +
Sbjct: 673 TMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAY 732
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM---SVFEKMKTDGHN 412
++ E ++ D M S+G Y +T ++ +++A+ + + T
Sbjct: 733 CKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDC 792
Query: 413 PDSETYDLLMTKWC 426
D+ + + T WC
Sbjct: 793 LDNVLVNRITTPWC 806
>gi|212275340|ref|NP_001130930.1| uncharacterized protein LOC100192035 [Zea mays]
gi|195614146|gb|ACG28903.1| hypothetical protein [Zea mays]
gi|219885707|gb|ACL53228.1| unknown [Zea mays]
gi|413935208|gb|AFW69759.1| hypothetical protein ZEAMMB73_548432 [Zea mays]
Length = 748
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 159/385 (41%), Gaps = 24/385 (6%)
Query: 81 PISQRLHLIFSHVTPT--PSLVQSTLNFSPEAGRA--ILGFNHWLTQNANFSHTDETLSF 136
P + RL ++PT LV ++ + AGRA L F + + FS T +
Sbjct: 83 PWTTRLENSIRLLSPTLDAPLVHGVISGAASAGRADLALQFFRFAYRRGGFSPEGATFAL 142
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERD 192
R+ ++D TLA+ I RA P + + F RM +
Sbjct: 143 LVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLF-RMMPN 201
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDE 251
G R S V++ + G + A ++ A+ + PD + LI G+ + K++
Sbjct: 202 IGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMET 261
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A R+ +M G YN +L+ R D L+S A KV +M G RN
Sbjct: 262 AVRVFGDMKGHGVTPDVTTYNTLLNA---WVRAGD---LES-ARKVFDEMAGEGTERNSV 314
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ-AARVGEGDEMIDR 370
++NV+I + R E+A+ LF M E G +E TF L+ L RV E + +D
Sbjct: 315 SYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPGLCDDQGRVAEARKAVDD 374
Query: 371 MKSAGYAIGKKDYYEFL---TRLCGIERIEQAMSVFEKMKTDGHN-PDSETYDLLMTKWC 426
M A + KD FL T LC ++ A+ V K H D Y +LM C
Sbjct: 375 M--AERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLC 432
Query: 427 AHNRVDKANALFDEAVRNGVEVKPK 451
A + + A + DE + G + PK
Sbjct: 433 AGGKCETAIEVLDELMEKGTLLSPK 457
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 44/286 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT--AN 227
I AGR L FF R GF + + L+V L ++A LV DT +
Sbjct: 108 ISGAASAGRADLALQFFRFAYRRGGFSPEGATFALLVPALASRRMLNHARCLVLDTMPSF 167
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ PD+ LI + EA +L R M G ++YN +L + LCR ++
Sbjct: 168 SVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAI--LCRGREA 225
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
A ++ M +GV +V T+N LI ++ E A+++F M G P+ TT
Sbjct: 226 M-----ARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVTT 280
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ + +A GD +E A VF++M
Sbjct: 281 YNTLLNAWVRA-----GD------------------------------LESARKVFDEMA 305
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+G +S +Y++++ + NRV++A ALF E G+ + K +
Sbjct: 306 GEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTF 351
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 12/259 (4%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILDCVSKLCRKKDPFRL 290
D + +I G G+ D A + R YR GGF + ++ ++ R+
Sbjct: 100 DAPLVHGVISGAASAGRADLALQFFRFAYRRGGFSPEGATFALLVPALASR-------RM 152
Query: 291 DSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ A ++LD M V + T LIS + ++A+KLF M G ++
Sbjct: 153 LNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYN 212
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++K++ R + + M + G A Y + +++E A+ VF MK
Sbjct: 213 AVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGH 272
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
G PD TY+ L+ W ++ A +FDE G E Y V +K + +
Sbjct: 273 GVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNV---MIKGYVEGNRV 329
Query: 470 KKRETLPEKMARKRRRLKQ 488
++ L +MA K RL +
Sbjct: 330 EEAVALFAEMAEKGLRLSE 348
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 19/258 (7%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE---IFPDDKICDL-----LIKGWCVDGKLDEAKRL 255
+++E LC G A +++ + + + P + + +I+ C +G +A+
Sbjct: 426 VLMEGLCAGGKCETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFLCSNGSTAKAETF 485
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
R++ + G + A+N L R + A+++L M VP + E+ +
Sbjct: 486 FRQLMKKGVD-DKAAFN-------SLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHAL 537
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ + K DA M + G P+ F ++++L+ RV ++ M G
Sbjct: 538 LVDSFLKKNEPADAKTALDSMMQQGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEKG 597
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
++ L L +E+A+ M +G PD D L+ C + RV +A
Sbjct: 598 VTENMDVAHKILEALFTRGHVEEAIGRVNLMVENGCMPD---LDKLLVGLCDNGRVMEAQ 654
Query: 436 ALFDEAVRNGVEVKPKEY 453
L D A+ +V Y
Sbjct: 655 KLADFALDRDFDVSFSTY 672
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 129/280 (46%), Gaps = 9/280 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ +D LV++G+ E M G + + ++ LC+ G A L++
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSK-GCSPNVVTYSSLLHGLCKAGKLDEATALLQR 280
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T + P+ + +I G C G++DEA L EM GG + V Y +LD K +
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D L +V+++ Y VP N+ T+N L+ CK E A +L M + GC P
Sbjct: 341 AEDAIGL----VEVMVEKGY--VP-NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 393
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ +I L +A +V EG ++++M S + + +C R++ A +F
Sbjct: 394 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF 453
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
++ G P+ TY+ L+ C R D+A L E R
Sbjct: 454 NLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTR 493
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 130/302 (43%), Gaps = 11/302 (3%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIK 241
L F+ ME D + +V+ L ++G A +LV+ ++ P+ L+
Sbjct: 204 LQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLH 263
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G C GKLDEA L + M R G V YN I+D KL R + + L L +M
Sbjct: 264 GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL-------LEEM 316
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
G NV T+ VL+ CK ++EDAI L M E G PN T+ L+ + V
Sbjct: 317 VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEV 376
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+++ M G Y + LC ++ + + + E+M ++ PD T++ +
Sbjct: 377 ERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI 436
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
+ C RVD A LF+ +G Y L K ++ + E L +M R
Sbjct: 437 IDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS---RRFDQAEYLLREMTR 493
Query: 482 KR 483
K+
Sbjct: 494 KQ 495
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 29/312 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D R G + +M + G++ + + ++ LC A +L K+
Sbjct: 151 TYGTLVDGFCRVGDLDGAVELVRKMT-ERGYRPNAITYNNIMHGLCSGRKLDSALQLFKE 209
Query: 225 TAN------EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
++F I D L+K GK+D+A RL M G V Y+ +L
Sbjct: 210 MEESGSCPPDVFTYSTIVDSLVKS----GKVDDACRLVEAMVSKGCSPNVVTYSSLL--- 262
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC+ +LD EA +L M +G N+ T+N +I CK+ R ++A L M +
Sbjct: 263 HGLCKAG---KLD-EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD 318
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
GC PN T+ VL+ + + + + +++ M GY Y L C + +E+
Sbjct: 319 GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVER 378
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG-----------VE 447
A + M G P+ +Y+ ++ C +V + L ++ + N ++
Sbjct: 379 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 438
Query: 448 VKPKEYRVDPRY 459
K YRVD Y
Sbjct: 439 AMCKTYRVDIAY 450
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDD 233
+A R L E+M G D S V+ LC+ A +++ K P+
Sbjct: 91 KANRVENALWLLEQMVM-RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNV 149
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
L+ G+C G LD A L R+M G+ + YN I+ LC + +LDS
Sbjct: 150 ITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM---HGLCSGR---KLDS- 202
Query: 294 AEKVLLDMEYNG-VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A ++ +ME +G P +V T++ ++ +L K + +DA +L M GC PN T+ L+
Sbjct: 203 ALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLL 262
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L +A ++ E ++ RM +G + Y + C + RI++A + E+M G
Sbjct: 263 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 322
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P+ TY +L+ +C + + A L + V G
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 355
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 8/253 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G K + ++ LC+ G S A ++ + PD + +I G +LD+A
Sbjct: 5 GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAI 64
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
RL EM GF +YN +L K R ++ L L M G P +V ++
Sbjct: 65 RLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL-------LEQMVMRGCPPDVVSY 117
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+I+ LCK+ + ++A ++ +M + GC PN T+ L+ + + E++ +M
Sbjct: 118 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN-PDSETYDLLMTKWCAHNRVD 432
GY Y + LC +++ A+ +F++M+ G PD TY ++ +VD
Sbjct: 178 RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 237
Query: 433 KANALFDEAVRNG 445
A L + V G
Sbjct: 238 DACRLVEAMVSKG 250
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 28/303 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKR--DKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+D++++ G V+ + ++ GF R D D +V K+ E GY A T N
Sbjct: 137 MDKMIQRGCQPNVITYGTLVD---GFCRVGDLDGAVELVRKMTERGYRPNAI-----TYN 188
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV-AYNCILDCVSKLCRKKD 286
I + G C KLD A +L +EM G V Y+ I+D + K + D
Sbjct: 189 NI----------MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
RL EA M G NV T++ L+ LCK + ++A L RM GC PN
Sbjct: 239 ACRL-VEA------MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIV 291
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +I + R+ E +++ M G Y L C + E A+ + E M
Sbjct: 292 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 351
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
G+ P+ TY+ L+ +C + V++A L ++ G Y L K V
Sbjct: 352 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 411
Query: 467 KKG 469
+G
Sbjct: 412 HEG 414
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+V LC++ AE L+++ + PD + +I G C ++D A +L +M
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 530
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G V Y+ + +S LC+ +R EA VL M NG T+ LI CK
Sbjct: 531 GLAPDDVTYSIV---ISSLCK----WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ A+++ + G +P+ TF + I L + R+ + E+++ M AG
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 643
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y L C R E A+ +FE M+ G PD+ TY L+
Sbjct: 644 YNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 13/319 (4%)
Query: 133 TLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + D F G+ +D + + +V+ V T S +D + + M
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGK 248
+ G + S V+ LC+ L++ +N PD + +I C +
Sbjct: 387 IQK-GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 445
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME-YNGVP 307
+D A L + G V YN + V LC+ + R D +AE +L +M G
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSL---VHGLCKSR---RFD-QAEYLLREMTRKQGCS 498
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ T+N +I LCK +R + A KLF +M G P++ T+ ++I SL + + E + +
Sbjct: 499 PDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNV 558
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
++ M G+ G Y + C +++A+ + + + + G PD T+ + +
Sbjct: 559 LELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSK 618
Query: 428 HNRVDKANALFDEAVRNGV 446
R+ +A L + +R G+
Sbjct: 619 RGRLRQAGELLETMLRAGL 637
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+ G C + D+A+ L REM R G + YN ++D LC+ K R+D A K+
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVID---GLCKSK---RVD-RAYKL 523
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L M +G+ + T++++IS+LCK R ++A + M + G P T+ LI +
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ + E++ + S G + F+ L R+ QA + E M G PD+ T
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 643
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
Y+ L+ +C +R + A LF+ + G E Y
Sbjct: 644 YNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATY 679
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 9/192 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L ++ R + F +M D G D + +V+ LC+ + A +++
Sbjct: 503 TYNTVIDGLCKSKRVDRAYKLFLQMLSD-GLAPDDVTYSIVISSLCKWRFMDEANNVLEL 561
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
F P LI G+C G LD+A + + + G V ++ +D +SK R
Sbjct: 562 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGR 621
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +A ++L M G+ + T+N L+ C R+EDA+ LF M + GC P
Sbjct: 622 LR-------QAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEP 674
Query: 344 NETTFLVLIKSL 355
+ T+ L+ L
Sbjct: 675 DNATYTTLVGHL 686
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ + ++ LC + DA+ F M + C P+ T+ +I L ++ R
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + +++ M G+A Y L C R+E A+ + E+M G PD +Y
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
++ C ++VD+A + D+ ++ G +
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQ 146
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T S + L ++ R Q M R G D + V++ LC++ A KL ++
Sbjct: 467 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 526
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + PDD ++I C +DEA + M + GF+ G + Y ++D C+
Sbjct: 527 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID---GFCK 583
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ LD E + L + P +V TF++ I L K R A +L M G P
Sbjct: 584 TGN---LDKALEILQLLLSKGSYP-DVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 639
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+ T+ L+K A+R + ++ + M+ G
Sbjct: 640 DTVTYNTLLKGFCDASRTEDAVDLFEVMRQCG 671
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 8/247 (3%)
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMY 260
L ++ LC++G S A +L N+ F D + + L+ G C GKLDEA R+ +E+
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G + V+YN + +S C KK +LD EA L +M G+ + T+++LI L
Sbjct: 533 GRGCVMDRVSYNTL---ISGCCGKK---KLD-EAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ + E+AI+ + G P+ T+ V+I +A R EG E D M S
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C R+ A+ + E MK G +P+S TY L+ +RV++A LF+E
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 441 AVRNGVE 447
G+E
Sbjct: 706 MRMEGLE 712
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 15/298 (5%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLG-FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
G L + I L + G+ ++ L +F+ + + GF D + ++ LCE G A +
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 221 LVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ K+ D++ + LI G C KLDEA EM + G + Y+ IL C
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS-ILIC-- 583
Query: 280 KLCRKKDPFRLDSEAEKVLL--DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
F ++ E + D + NG+ +V T++V+I CK R+E+ + F M
Sbjct: 584 ------GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
PN + LI++ ++ R+ E+ + MK G + Y + + I R+E
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+A +FE+M+ +G P+ Y L+ + ++ K L E V Y V
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA K+ ME GV NV TFN +I L R ++A +M E G P T+ +L+
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
K L +A R+G+ ++ M G+ Y + + +A+ + + M + G +
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
S TY+ L+ +C + + D A L E + G V +
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + I +C GK++EA +L +M G V +N ++D + R + F
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ M G+ + T+++L+ L + +R DA + M + G PN +
Sbjct: 316 MFKEK-------MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI S +A + + E+ D M S G ++ Y + C + + A + ++M +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
G N + ++ ++ C+H +FD A+R
Sbjct: 429 IGFNVNQGSFTSVICLLCSH-------LMFDSALR 456
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 129/325 (39%), Gaps = 12/325 (3%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDF-LVDNKEVLGPKTLASCI-DRLVRAGRPTQVLGFFE 187
+D + + F R + A+ F ++ NK + KT + + LVRA + F+
Sbjct: 191 SDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 250
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVD 246
+ + G D + C+ G A KL K + P+ + +I G +
Sbjct: 251 VVCK--GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 308
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+ DEA +M G E + Y+ ++ +++ R D + VL +M G
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF-------VLKEMTKKGF 361
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P NV +N LI + + AI++ M G +T+ LIK + + +
Sbjct: 362 PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER 421
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ M S G+ + + + + LC + A+ +M +P L++ C
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 427 AHNRVDKANALFDEAVRNGVEVKPK 451
H + KA L+ + + G V +
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTR 506
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 13/291 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T + ID L GR + F E+M ER G + + ++V+ L A ++K
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVER--GMEPTLITYSILVKGLTRAKRIGDAYFVLK 354
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + FP + I + LI + G L++A + M G L + YN + + C
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL---IKGYC 411
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ AE++L +M G N +F +I LC + A++ M
Sbjct: 412 KNGQA----DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P LI L + + + E+ + + G+ + + L LC ++++A +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+++ G D +Y+ L++ C ++D+A DE V+ G +KP Y
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG--LKPDNY 576
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 15/225 (6%)
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMY-----RGGFELGTVAYNCILDCVSKLCRKKDPF 288
K+ DLLI+ +C K D LA +++ +G F T N +L + L R + F
Sbjct: 189 KMSDLLIEVYCTQFKRDGC-YLALDVFPVLANKGMFPSKTTC-NILL---TSLVRANE-F 242
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA D+ GV +V F I+ CK + E+A+KLF +M E G PN TF
Sbjct: 243 QKCCEA----FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF 298
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L R E ++M G Y + L +RI A V ++M
Sbjct: 299 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 358
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G P+ Y+ L+ + ++KA + D V G+ + Y
Sbjct: 359 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD ++I G C + +E + EM + TV YN + + CR
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL---IRAYCRSG- 659
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
RL S A ++ DM++ G+ N T+ LI + I R E+A LF M G PN
Sbjct: 660 --RL-SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ LI + ++ + + ++ M S K Y + + +A + +M
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Query: 407 KTDGHNPDSETY 418
+ G PDS TY
Sbjct: 777 REKGIVPDSITY 788
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+V C G A +LV + E PD + LI+G C G+ A + EM R
Sbjct: 6 MVAGYCGAGQLDAARRLVAEMPVE--PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRC 63
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
V Y +L+ K K +A K+L +M G ++ T+NV+++ +C+
Sbjct: 64 VPDVVTYTILLEATCKRSGYK-------QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R +DAI+ + +GC PN ++ +++K L A R + +E++ M G +
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
++ LC +E A+ V E++ G P+S +Y+ L+ +C ++DKA A D V
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 445 G 445
G
Sbjct: 237 G 237
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 133/284 (46%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L GR L + M R D + +++E C+ A KL+ +
Sbjct: 34 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVP-DVVTYTILLEATCKRSGYKQAMKLLDE 92
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ PD ++++ G C +G++D+A + + G E TV+YN +L + R
Sbjct: 93 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 152
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D AE+++ +M G P NV TFN+LIS LC+ E A+++ ++ ++GC P
Sbjct: 153 WED-------AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 205
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ L+ + + ++ + +D M S G Y LT LC ++ A+ +
Sbjct: 206 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 265
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++K G P +Y+ ++ + +A L +E V G++
Sbjct: 266 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 309
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 8/254 (3%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD 246
R+ + + D + ++ LC G + A ++ + PD +L++ C
Sbjct: 21 RLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 80
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
+A +L EM G V YN + V+ +C++ R+D +A + L ++ G
Sbjct: 81 SGYKQAMKLLDEMRDKGCTPDIVTYNVV---VNGICQEG---RVD-DAIEFLKNLPSYGC 133
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
N ++N+++ LC R EDA +L MG+ GC PN TF +LI L + V E
Sbjct: 134 EPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALE 193
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+++++ G Y L C +++++AM+ + M + G PD +Y+ L+T C
Sbjct: 194 VLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALC 253
Query: 427 AHNRVDKANALFDE 440
VD A L +
Sbjct: 254 RSGEVDVAVELLHQ 267
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 133/287 (46%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + + GR + F + + YG + + S +V++ LC AE+L+ + +
Sbjct: 109 VNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 167
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + + ++LI C G ++ A + ++ + G +++YN +L C++K
Sbjct: 168 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL---HAFCKQK--- 221
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D +A L M G ++ ++N L++ LC+ + A++L +++ + GC P ++
Sbjct: 222 KMD-KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY 280
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L +A + E E+++ M S G Y LC +RIE A+ F K++
Sbjct: 281 NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 340
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G P++ Y+ ++ C A LF + NG Y +
Sbjct: 341 MGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 387
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV-----KDTANEIFPDDKICDLLIKGWCVDGK 248
G D S ++ LC +G A +L+ K A + + + D L K GK
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA----GK 292
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
EA L EM G + + Y+ I + LCR+ R++ +A + ++ G+
Sbjct: 293 TKEALELLNEMVSKGLQPDIITYSTI---AAGLCRED---RIE-DAIRAFGKVQDMGIRP 345
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N +N +I LCK R + AI LF M GC PNE+T+ +LI+ L + E +++
Sbjct: 346 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 405
Query: 369 DRMKS 373
D + S
Sbjct: 406 DELCS 410
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 6/171 (3%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+N +++ C + + A +L + E P+ T+ LI+ L R ++D M
Sbjct: 2 AYNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
Y L C +QAM + ++M+ G PD TY++++ C RV
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
D A G E Y + LK ++ + E L +M +K
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNI---VLKGLCTAERWEDAEELMGEMGQK 166
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 27/310 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + ++ L R GR + + +RM D G + ++ + +V+ +C+ G A L++
Sbjct: 181 TFTTLMNGLCREGRVVEAVALLDRMLED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRK 239
Query: 224 -DTANEIFPDDKICDL-----LIKGWCVDGKLDEAKRLAREMY-RGGFELGTVAYNCILD 276
+ + I P+ I L +I G+C G+ EA++L +EM R V YN +++
Sbjct: 240 MEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALIN 299
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
K + F EAE++ +M G+ + T++ +I CK R + A +FY M
Sbjct: 300 AFVK----EGKF---FEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLM 352
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
GC P+ TF LI +A RV +G +++ M AG Y + C + +
Sbjct: 353 ATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR-----------NG 445
A + ++M + G P+ T + L+ C + ++ A +F + NG
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNG 472
Query: 446 VEVKPKEYRV 455
VE + Y +
Sbjct: 473 VEPDVQTYNI 482
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 137/323 (42%), Gaps = 23/323 (7%)
Query: 133 TLSFFTDYFGRRKDFKAI-HDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S D F ++ A H F + + P T + I RA R + M
Sbjct: 328 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 387
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGK 248
+ G + + ++ C+ G + A+ L+++ ++ + P+ C+ L+ G C +GK
Sbjct: 388 T-EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK 446
Query: 249 LDEAKRLAREMYRG-----------GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L +A + + M + G E YN + +S L + EAE++
Sbjct: 447 LKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNIL---ISGLINEGKFL----EAEEL 499
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M + G+ + T+N +I LCK R ++A ++F MG PN TF LI +
Sbjct: 500 YEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 559
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
A RV +G E+ M G Y + + I A+ +F++M G PD+ T
Sbjct: 560 AGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTIT 619
Query: 418 YDLLMTKWCAHNRVDKANALFDE 440
++T + + +A A+ ++
Sbjct: 620 IRNMLTGLWSKEELKRAVAMLED 642
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C G L+ A+ L +EM G V N +LD + + KD + +K
Sbjct: 402 LIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 461
Query: 299 LDME----YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+D++ +NGV +V+T+N+LIS L + +A +L+ M G P+ T+ +I
Sbjct: 462 MDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHG 521
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + +R+ E +M D M S ++ + + C R++ + +F +M G +
Sbjct: 522 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 581
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ TY L+ + ++ A +F E + +GV
Sbjct: 582 AITYITLIHGFRKVGNINGALDIFQEMMASGV 613
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 205 VVEKLCENGYASYAEKLVKDTA------------NEIFPDDKICDLLIKGWCVDGKLDEA 252
+++ LC+NG A ++ K N + PD + ++LI G +GK EA
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEA 496
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L EM G T+ YN + + LC++ RLD EA ++ M NV T
Sbjct: 497 EELYEEMPHRGIVPDTITYNSV---IHGLCKQS---RLD-EATQMFDSMGSKSFSPNVVT 549
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
F LI+ CK R +D ++LF MG G N T++ LI + + ++ M
Sbjct: 550 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMM 609
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++G LT L E +++A+++ E ++
Sbjct: 610 ASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME VP N +F +L+ C + A+ F ++ + G HP TF L+ L R
Sbjct: 104 MEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDR 163
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E ++ +M + + LC R+ +A+++ ++M DG P+ TY
Sbjct: 164 ISEALDLFHQMCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 219
Query: 421 LMTKWC 426
++ C
Sbjct: 220 IVDGMC 225
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+L+K +C KL A ++ + GF V ++ +L LC + R+ SEA
Sbjct: 118 ILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLL---HGLCVED---RI-SEA--- 167
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
LD+ + NV TF L++ LC+ R +A+ L RM E G PN+ T+ ++ + +
Sbjct: 168 -LDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 226
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE------RIEQAMSVFEKM-KTDG 410
++ +M+ + + R C I R +A + ++M +
Sbjct: 227 MGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKK 286
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+PD TY+ L+ + + +A L+DE + G+
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 322
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 8/280 (2%)
Query: 171 DRLVRA-GRPTQVLGFFERMER--DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
D LV A R ++L FE +R DYGFK S ++ L + E + ++
Sbjct: 89 DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK 148
Query: 228 EIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ I ++++ G C GKL+ A + +M G + YN ++D K+ R
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGK 208
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
++ D+ +L +M G+ N T+N+LI CK A+++F M G PN
Sbjct: 209 MYKADA----ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVV 264
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +LI L +V E + D+M S+ + + C + + +A+++F M
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM 324
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ G +P++ TY L+ +C R++ A AL++ + G+
Sbjct: 325 EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGI 364
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 13/253 (5%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++++ C++ S A ++ + + + P+ ++LI G C DGK+DEA L +M
Sbjct: 233 ILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS 292
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
E V +N + ++ C+ K +EA + DME GV N T+ LI CK
Sbjct: 293 DLEPNVVTHNVL---INGFCKNKTV----NEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
R EDA L+ M + G P +T+ LI L + V +++ M S +
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC +A+ + ++M G NP TY+ LM +C + A V
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAA-----LIV 460
Query: 443 RNGVEVKPKEYRV 455
R +E K K+ V
Sbjct: 461 RTRMERKGKQANV 473
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 16/279 (5%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCV---DGKLDEAKRLA 256
S +VV LC+ G + A +++D + P+ + LI G+C GK+ +A +
Sbjct: 157 SFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAIL 216
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+EM G V YN ++D C+ ++ S A +V +M+ G+ NV T+N+L
Sbjct: 217 KEMVAKGICPNEVTYNILID---GFCKDENV----SGAMRVFGEMQRQGLRPNVVTYNIL 269
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LC + ++A+ L +M PN T VLI + V E + + M+ G
Sbjct: 270 INGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGV 329
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + C R+E A +++ M G P+ TY+ L+ C V A +
Sbjct: 330 DPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
L +E V + Y + L KKG+ R+ +
Sbjct: 390 LMNEMVSKKLSADVVTYNILIDSL-----CKKGESRKAV 423
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 126/287 (43%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID + + + F M+R G + + + +++ LC +G A L +++
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQ-GLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSD 293
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ ++LI G+C + ++EA L +M + G + + Y ++D K R +D F
Sbjct: 294 LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAF 353
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L +++D G+ V T+N LI+ LC+ + A L M + T+
Sbjct: 354 AL----YNMMID---RGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI SL + + +++D M G Y + C + A+ V +M+
Sbjct: 407 NILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMER 466
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G + T+++L+ +C R++ AN L +E + G+ Y +
Sbjct: 467 KGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ C+N + A L D + + P+ LI +C DG++++A L M
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR 362
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G YNC+ ++ LCRK D A ++ +M + +V T+N+LI +LCK
Sbjct: 363 GIFPEVSTYNCL---IAGLCRKGDV----KAARSLMNEMVSKKLSADVVTYNILIDSLCK 415
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
S A+KL M E G +P+ T+ L+ + + + RM+ G
Sbjct: 416 KGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVT 475
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ + C R+E A + +M G P+ TY+++
Sbjct: 476 HNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 83/198 (41%), Gaps = 9/198 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + GR + M D G + + ++ LC G A L+ +
Sbjct: 335 TYTTLIDAYCKDGRMEDAFALYNMM-IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNE 393
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ D + ++LI C G+ +A +L EM+ G V YN ++D CR
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMD---GYCR 450
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + A V ME G NV T NVLI C R EDA L M E G P
Sbjct: 451 EGNL----RAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVP 506
Query: 344 NETTFLVLIKSLYQAARV 361
N TT+ ++ + + + V
Sbjct: 507 NRTTYEIIKEEMMEKGFV 524
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 9/240 (3%)
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ G+ + AE+LV++ + + L+ GWC GKLDEAK + M V
Sbjct: 173 KTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVV 232
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+N +L R +D F L E ME G P N ++ L+ L R ++A+
Sbjct: 233 FNTLLAGFVADGRFEDAFELARE-------MERRGCPPNAVSYTTLMQGLGARGRVDEAM 285
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
++F M GC P+ T+ L+ + +A R+ +G E +D M G + Y F
Sbjct: 286 RVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAH 345
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
E++E+ + + E+M+ PD Y++++ C +A AL++E N E+ P
Sbjct: 346 EKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETN--ELSP 403
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 7/231 (3%)
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
L + A E+ PD + + L+ G+ DG+ ++A LAREM R G V+Y ++ +
Sbjct: 218 LARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGA 277
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
R EA +V ++M G + T+ L++ CK R + M G
Sbjct: 278 RGRV-------DEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREG 330
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
+ +L + + ++ E E+++RM+ Y + C + +QA+
Sbjct: 331 LRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAV 390
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+++ +M+T+ +P +T+ +++T + +A F + V G+ V P+
Sbjct: 391 ALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQ 441
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 25/290 (8%)
Query: 175 RAGRPTQVL------GFFERMERDYGFKR-----------DKDSLRLVVEKLCENGYASY 217
R RPT V G+ + D GF+ D + +++ LC+ G
Sbjct: 254 RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313
Query: 218 AEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A KL + + + P+D LI G CV G+ D + ++M R G + + YN +
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL-- 371
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
++ LC+ D EA+K++++M G+ + T+ +LI CK E A+++ M
Sbjct: 372 -INGLCKVGDL----REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ G + F LI + +V E + + M AG Y + C +
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDV 486
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ + ++M+ DGH P TY++L+ C ++ AN L D + GV
Sbjct: 487 KTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 184/442 (41%), Gaps = 51/442 (11%)
Query: 39 NFLSKP------FSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPL-PISQRLHLIFS 91
NFLS P FS+ T DP I ++S E ++ P P+ L I
Sbjct: 11 NFLSSPRGGFLCFSTWMTPPTSHCHDP---ILTTIS----EAIKVSPTKPLHSSLKRILP 63
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFS---HTDETLSFFTDYFGRRKDFK 148
+TP + LN + ++L F WL+ +F H+ T++ F + +
Sbjct: 64 SLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQ 123
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQ-------VL-------GFFE------R 188
++ F+V K K AS + V R T VL G+F R
Sbjct: 124 SLLQFVVSRKG----KNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR 179
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC--DLLIKGWCVD 246
+ R + + S + ++L + S A ++ + +P D +C ++L+ C +
Sbjct: 180 LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPD-VCKFNVLMHRLCKE 238
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
K++EA+ L E+ + G V++N +++ K FRL M N V
Sbjct: 239 HKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRF-------MMENRV 291
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T++VLI+ LCK + +DA KLF M + G PN+ TF LI R G E
Sbjct: 292 FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGME 351
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ +M G Y + LC + + +A + +M G PD TY +L+ C
Sbjct: 352 IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCC 411
Query: 427 AHNRVDKANALFDEAVRNGVEV 448
++ A + E V+ G+E+
Sbjct: 412 KEGDLESALEIRKEMVKEGIEL 433
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 133/302 (44%), Gaps = 9/302 (2%)
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-I 229
DRL++ + F+E + D G+ D +++ +LC+ + A+ L + +
Sbjct: 198 DRLMKLNLTSPAWAFYEEI-LDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P + LI G+C G LD+ RL R M Y+ + ++ LC++ +
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVL---INGLCKEG---Q 310
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
LD +A K+ L+M G+ N TF LI+ C R++ ++++ +M G P+ T+
Sbjct: 311 LD-DANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI L + + E +++ M G K Y + C +E A+ + ++M +
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
G D+ + L++ +C +V +A E + G++ Y + K VK G
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 470 KK 471
K
Sbjct: 490 FK 491
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 9/273 (3%)
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
F+++N+ T + I+ L + G+ F M D G + + ++ C
Sbjct: 285 FMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM-CDRGLVPNDVTFTTLINGHCVT 343
Query: 213 GYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G A ++ + + + PD + LI G C G L EAK+L EM + G + Y
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
++D C++ D L+S E + +M G+ + F LIS C+ + +A +
Sbjct: 404 TMLID---GCCKEGD---LESALE-IRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
M E G P++ T+ ++I + V G +++ M+ G+ G Y L LC
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+++ A + + M G PD TY++L+ +
Sbjct: 517 KQGQMKNANMLLDAMLNLGVVPDDITYNILLER 549
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 8/170 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G K DK + ++++ C+ G A ++ K+ E D + LI G+C +G++ EA
Sbjct: 395 GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEA 454
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+R REM G + Y + + C+K D K+L +M+ +G V T
Sbjct: 455 ERTLREMLEAGIKPDDATYTMV---IHGFCKKGDV----KTGFKLLKEMQCDGHVPGVVT 507
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
+NVL++ LCK + ++A L M G P++ T+ +L++ QA + G
Sbjct: 508 YNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWKQG 557
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 12/274 (4%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKI 235
G+ + ++ F+ + R G++ + ++ L + A EK + PDD
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
++++G C G+LD+AK L ++ G +L + Y+ ++D K R D A
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDD-------AL 128
Query: 296 KVLLDMEYNG--VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
++ M G VP +V TFN L+ LC R +A LF M + GC PN ++ L+
Sbjct: 129 EIFKTMSAGGGCVP-DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLD 187
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L +A R+ E + + M Y F+T LC R+ +A KM T G
Sbjct: 188 GLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKA 247
Query: 414 DSETYDLLMTKWCAHNRVDKA-NALFDEAVRNGV 446
D+ + ++ C ++A N + + R+G+
Sbjct: 248 DAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGM 281
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 33/300 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-----EKLVK- 223
+ L +A R + +M G K D + V+ LC+ G+A A E L +
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTK-GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRS 279
Query: 224 ---DTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREM-----YRGGFEL 266
D A + F P ++ + LI C +L + L + M + L
Sbjct: 280 GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL 339
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
T YN ++D LC+ K +LD EA++++ +M G+ +V T++ L+ LCK+ +
Sbjct: 340 ET--YNIMVD---NLCKAK---QLD-EAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+ A L M + G P+ T ++ +L +A +V ++ MK+ G Y
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L LC RI++A++ KM PD +Y +++T C + A+A+F E V+ GV
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGV 510
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 123/306 (40%), Gaps = 43/306 (14%)
Query: 179 PTQVLGFFERME--RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKI 235
P VL F+RM+ +++ + ++ ++V+ LC+ A++LV + AN + PD
Sbjct: 318 PDGVL-LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
L+ G C GKLD A L EM + G + IL+ +SK K + L
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK--AGKVDYALSH--- 431
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
L M+ G ++ T+N L+ LCK R ++AI +M C P+ ++ ++I +L
Sbjct: 432 --LETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITAL 489
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL------------------------- 390
++ + + M G Y+ L L
Sbjct: 490 CRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMH 549
Query: 391 -------CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
C + E A V E+M G D+ TY ++ +VDKA L D+A
Sbjct: 550 KMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASE 609
Query: 444 NGVEVK 449
V+
Sbjct: 610 THTSVE 615
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +V T+N + L K + A + F +M G P++ T+ ++++ L +A + +
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN-PDSETYDLLMT 423
E++ +++ +G + Y + C R++ A+ +F+ M G PD T++ L+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152
Query: 424 KWCAHNRVDKANALFDEAVRNGVE 447
C+ R+ +A LF+ + G E
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCE 176
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVK 223
T AS ++ L +AG+ L E M + G D + +++ LC+ G A L K
Sbjct: 411 TDASILNALSKAGKVDYALSHLETM-KARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + PD ++I C G+ A + +EM + G TV Y+ +LD +++
Sbjct: 470 MVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR--- 526
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ E + L++ + + + +++ LCK ++EDA ++ RM + G
Sbjct: 527 --------NGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFP 578
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMID 369
+ T++ +++ L + +V + +++D
Sbjct: 579 ADAFTYINVVRGLRKLGKVDKARQLVD 605
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 41/263 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L +A + + M +YG D + +V+ LC+ G A L+++ + E
Sbjct: 346 VDNLCKAKQLDEAQELVNEMA-NYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FPD ++ GK+D A M G V YN +LD LC+
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLD---GLCKAG--- 458
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-------- 340
R+D EA L M +V ++ ++I+ LC+ ++ A +F M + G
Sbjct: 459 RID-EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517
Query: 341 ------------------------CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
C P+ +++ L +A + + E+++RM AG+
Sbjct: 518 HSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGF 577
Query: 377 AIGKKDYYEFLTRLCGIERIEQA 399
Y + L + ++++A
Sbjct: 578 PADAFTYINVVRGLRKLGKVDKA 600
>gi|414587959|tpg|DAA38530.1| TPA: hypothetical protein ZEAMMB73_367044 [Zea mays]
Length = 537
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 17/286 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I LV GR + + M G D ++ +V +LC A +LV +
Sbjct: 88 IHALVVQGRVAEATMLLDEMLL-MGCAADVNTFNDLVLRLCGLRRVREAARLVDRMMTQG 146
Query: 229 IFPDDKICDLLIKGWCVDGKLDEA-KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P L++G C + DEA L R L TV C+++ KL R
Sbjct: 147 CMPSAMTYGFLLQGLCRTRQADEACTLLGRLPEVNVVMLNTVICGCLME--GKLARVTKL 204
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ + M G P +V T+++L+ LCK+ R +++ +M E C PN T
Sbjct: 205 YEM----------MGSKGCPSDVHTYSILMHGLCKLGRFGSGVRMLDKMEENSCAPNIMT 254
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ S + + M+D+M + G+++ + Y + LC +++QA + ++MK
Sbjct: 255 YSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMK 314
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ G PD TY+ L+ C VD + AL +E V G +KP +
Sbjct: 315 SQGCKPDICTYNGLIKALCKEGNVDWSMALLEEMVTKG--IKPNNF 358
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 289 RLDSEAEKVLL--DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R D A+ +LL M + VP TF V+ LC++ R+ DA+ M GC P+
Sbjct: 23 RADCHADALLLYRRMLRDHVPPTTFTFGVVARALCRLGRAGDALARLRGMARHGCVPDAV 82
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ ++I +L RV E ++D M G A + + + RLCG+ R+ +A + ++M
Sbjct: 83 LYQIVIHALVVQGRVAEATMLLDEMLLMGCAADVNTFNDLVLRLCGLRRVREAARLVDRM 142
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
T G P + TY L+ C + D+A L
Sbjct: 143 MTQGCMPSAMTYGFLLQGLCRTRQADEACTLL 174
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 34/309 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV------------------VEKLCE 211
+D ++ G V F + + R G +R +++ RLV ++ LC
Sbjct: 104 LDEMLLMGCAADVNTFNDLVLRLCGLRRVREAARLVDRMMTQGCMPSAMTYGFLLQGLCR 163
Query: 212 NGYASYAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
A A L+ N + + IC L+ +GKL +L M G
Sbjct: 164 TRQADEACTLLGRLPEVNVVMLNTVICGCLM-----EGKLARVTKLYEMMGSKGCPSDVH 218
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
Y+ ++ + KL R R+ L ME N N+ T++ L+ + C+ +DA
Sbjct: 219 TYSILMHGLCKLGRFGSGVRM-------LDKMEENSCAPNIMTYSTLLHSFCRNGMWDDA 271
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ +M G N + +I +L + ++ + ++ MKS G Y +
Sbjct: 272 RAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNGLIKA 331
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC-AHNRVDKANALFDEAVRNGVEV 448
LC ++ +M++ E+M T G P++ +Y++L+ + C A N + + + LF+ VR G
Sbjct: 332 LCKEGNVDWSMALLEEMVTKGIKPNNFSYNMLINELCKAGNVIIECSGLFNTPVRIGASF 391
Query: 449 K-PKEYRVD 456
P Y +D
Sbjct: 392 TLPWFYCID 400
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKD 224
++ ID L + G + LG ++ ER G D + +++ C G + + L K
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGER--GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ PDD ++LI C +G++ EA+ + M + G + V YN +++ C +
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALME---GYCSR 313
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
++ EA ++ M G+ +V +NVLI CK + ++A+ LF + P
Sbjct: 314 ENV----HEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT 369
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
++ LI L + R+ +++D M + Y + LC RI +A+ V
Sbjct: 370 IASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLV 429
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M G P+ TY+ +M +C N V+ A +F+ V++G+E Y V
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNV 480
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 9/259 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
F RM + G + D + ++++ C+ A L K+ N+ + P + LI G
Sbjct: 322 LFNRMVKR-GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G++ K+L EM+ V YN ++D LC++ EA VL+ M
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILID---ALCKEGRIL----EALGVLVMMMK 433
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
GV N+ T+N ++ C A +F RM + G P+ + VLI + V E
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ M+ Y + LC + RI + ++M G +PD TY++L+
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 424 KWCAHNRVDKANALFDEAV 442
+C DKA +LF + V
Sbjct: 554 AFCKTQPFDKAISLFRQIV 572
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L + GR + G M + G K D + ++E C A +L
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKR-GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++LI G+C +DEA L +E+ +YN ++D LC
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID---GLCNSG--- 384
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+ S +K+L +M + P +V T+N+LI LCK R +A+ + M + G PN T+
Sbjct: 385 RI-SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ V ++ +RM +G +Y + C E +++A+ +F++M+
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD +Y+ L+ C R+ L DE +G
Sbjct: 504 KNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 9/277 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ G + L F + + G+ D+ + ++ L +NG A L+++
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQ-GYLFDQFTYGTLINGLSKNGQIKAALHLLQE 185
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ + LI G C DG + +A L ++ G L V YN ++D + R
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ E ++L M V + TFN+LI LCK R +A + M + G P
Sbjct: 246 WQ-------EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ L++ V E E+ +RM G +Y + C + +++AM +F
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+++ P +Y+ L+ C R+ L DE
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 10/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
ID L + GR + LG M + G K + + +++ C + A+ + + +
Sbjct: 412 IDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++LI G+C +DEA L +EM +YN ++D + L R
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI---- 526
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+++L +M +G +V T+N+L+ CK + + AI LF ++ E G P+ T
Sbjct: 527 ---PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTN 582
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ +L + ++ ++ + + G + + Y + LC +AM + KM+
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMED 642
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ PD+ T+++++ N DKA L +E + G+
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 80/196 (40%), Gaps = 11/196 (5%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
A L + + G++ V +N I++ C++ + K F + A+ L D
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQF------- 161
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
T+ LI+ L K + + A+ L M + PN + LI L + V + +
Sbjct: 162 --TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCS 219
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
++ G + Y + C + R ++ + KM + +PD T+++L+ C
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279
Query: 430 RVDKANALFDEAVRNG 445
R+ +A + + G
Sbjct: 280 RILEAQGVLAMMSKRG 295
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 3/190 (1%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A + ++ G+ ++ TF +LI+ + A L + + G PN TF +I
Sbjct: 74 AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ + + + + GY + Y + L +I+ A+ + ++M+ P
Sbjct: 134 GFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
+ Y L+ C V A L + G+ + Y + +V + ++
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYN---SLIDGCCSVGRWQEVT 250
Query: 474 TLPEKMARKR 483
L KM R+
Sbjct: 251 QLLTKMVREN 260
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 56/141 (39%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P F+ L+ + ++ AI LF ++ G P+ TF +LI + +
Sbjct: 52 PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ + +GY + + C I +A+ + + G+ D TY L+
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171
Query: 427 AHNRVDKANALFDEAVRNGVE 447
+ ++ A L E ++ V+
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQ 192
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ L + G T L ++ME + G K + + +++ LC++ + A +
Sbjct: 47 TYSTIINGLCKMGNTTMALQLLKKME-EKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSE 105
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E P D ++ G+C G+++EA L ++M V + ++D LC+
Sbjct: 106 MVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILID---GLCK 162
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K R+ SEA V M G+ +V T+N L+ C + ++A KLF M GC P
Sbjct: 163 K----RMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAP 218
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ +LI ++ R+ E ++ M Y + C + R ++A +
Sbjct: 219 NVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELL 278
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M + G P+ TY +++ C H +D+A L + +E
Sbjct: 279 KEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIE 322
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 7/219 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ L+ G C K+ +A +L EM + G E + Y+ I ++ LC+ + + A +
Sbjct: 14 NTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTI---INGLCKMGNT----TMALQ 66
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L ME G NV +N +I +LCK R +A+ F M + G P+ T+ ++
Sbjct: 67 LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
RV E + +M K + + LC I +A VFE M G PD
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY+ L+ +C+ +++D+A LF+ R G + Y +
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNI 225
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 7/210 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +I G C G A +L ++M G + VAYN I+D LC+ RL
Sbjct: 43 PDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIID---SLCKD----RL 95
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+EA +M G+P +V T++ ++ C + R +A LF +M E PN+ TF +
Sbjct: 96 VTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTI 155
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI L + + E + + M G Y + C ++++A +F M G
Sbjct: 156 LIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKG 215
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
P+ +Y++L+ C R+D+A L E
Sbjct: 216 CAPNVRSYNILINGHCKSGRIDEAKGLLAE 245
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 14/288 (4%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN- 227
C DRLV T+ + FF M ++ G D + ++ C G + A L K
Sbjct: 91 CKDRLV-----TEAMDFFSEMVKE-GIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVER 144
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ P+ +LI G C + EA + M G E YN ++D C +
Sbjct: 145 NVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVD---GYCSRS-- 199
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
++D EA+K+ M+ G NV ++N+LI+ CK R ++A L M P+ T
Sbjct: 200 -QMD-EAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFT 257
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L++ Q R E E++ M S G Y L LC +++A + + M+
Sbjct: 258 YSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQ 317
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+ Y +L+ C +++ A LF G++ Y V
Sbjct: 318 ESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTV 365
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 133/316 (42%), Gaps = 9/316 (2%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
GR + ++ +V+ + T ID L + ++ FE M + G + D
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETM-TEKGLEPDVY 186
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ +V+ C A+KL + P+ + ++LI G C G++DEAK L EM
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
Y+ ++ C+ P EA+++L +M G+ N+ T+++++
Sbjct: 247 SHKSLTPDIFTYSTLM---RGFCQVGRP----QEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LCK ++A +L M E PN + +LI+ + ++ E+ + G
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y ++ L +A +F +M +G P+S TY++++ + + A L +
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419
Query: 440 EAVRNGVEVKPKEYRV 455
E V G +R+
Sbjct: 420 EMVGKGFSADSSTFRM 435
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ + TFN L+S LC + DA+KLF M + G P+ T+ +I L +
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+++ +M+ G Y + LC + +AM F +M +G PD TY ++
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 425 WCAHNRVDKANALFDEAVRNGV 446
+C RV++A +LF + V V
Sbjct: 125 FCNLGRVNEATSLFKQMVERNV 146
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 48/111 (43%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M + G P TF L+ L A++ + ++ D M G+ Y + LC +
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
A+ + +KM+ G P+ Y+ ++ C V +A F E V+ G+
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGI 111
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 147/341 (43%), Gaps = 14/341 (4%)
Query: 122 TQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV---LGPKTLASCIDRLVRAGR 178
+Q F+H + T S D R K F A+ L K + + R+
Sbjct: 80 SQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDL 139
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF--PDDKIC 236
+V+ F ++ K +++ + L ++G + + KL+ + + P+ I
Sbjct: 140 HDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIF 199
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
++L+K C +G ++ A + EM R G ++ Y+ ++DC+ R K EA
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK-------EAV 252
Query: 296 KVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
++ DM G+ + TFNV+I+ C+ E A K+ M + GC+PN + L+
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ ++ E + D +K G + Y + C ++AM + +MK D
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ TY++++ + R ++A + D+ GV + YR+
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 124/282 (43%), Gaps = 14/282 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-- 222
T ++ +D L R + + FE M G D + +++ C G A+K++
Sbjct: 234 TYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDF 293
Query: 223 --KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
K+ N P+ L+ G+C GK+ EAK+ E+ + G +L TV Y +++C
Sbjct: 294 MKKNGCN---PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC--- 347
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
CR + EA K+L +M+ + + T+NV++ L RSE+A+++ + G G
Sbjct: 348 FCRNGET----DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEG 403
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
H N+ ++ +++ +L + + + + M G + E + RLC E +
Sbjct: 404 VHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGV 463
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
V G P +++ ++ C ++ L D V
Sbjct: 464 RVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 101/233 (43%), Gaps = 9/233 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G + K I DF+ N ++ ++ + G+ + F+ +++ G K D
Sbjct: 282 GEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKT-GLKLDTVG 340
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ C NG A KL+ + A+ D +++++G +G+ +EA ++ +
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWG 400
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G L +Y IL+ LC + +A K L M G+ + T+N L+ L
Sbjct: 401 SEGVHLNKGSYRIILN---ALCCNGEL----EKAVKFLSVMSERGIWPHHATWNELVVRL 453
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
C+ +E +++ G P ++ +++S+ + ++ E++D + S
Sbjct: 454 CESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 9/275 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ L + G T G F++ME + G + + + ++++ LC++ + A +
Sbjct: 202 TYTTIINGLCKIGETTAAAGLFKKME-EAGCQPNVVTYNILIDSLCKDKLVNEALDIFSY 260
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A I PD + LI+G C + EA L EM +N ++D + K +
Sbjct: 261 MKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGK 320
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
SEA+ V M GV +V T++ L+ +A KLF M GC P
Sbjct: 321 V-------SEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKP 373
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ +LIK +A R+ E ++ + M G +Y + LC + R+ +A +F
Sbjct: 374 DAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLF 433
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ M ++G+ PD TY +L+ +C + KA LF
Sbjct: 434 KNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLF 468
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 155/367 (42%), Gaps = 26/367 (7%)
Query: 92 HVTPTPSLVQST--LNFSPEAGR---AILGFNHWLTQNANFSHTDETLSFFTDYFG--RR 144
H P P ++Q T L+ + G+ A++ + + + A S TLS D F +R
Sbjct: 87 HREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQM-ELAGLSPDIYTLSILIDCFSHLQR 145
Query: 145 KDFKAIHDFLVDNKEV-LGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
D F V +K + LG + T + I+ L + G+ Q + FF+ E G +
Sbjct: 146 VDLA----FSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS-GCQPTV 200
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ ++ LC+ G + A L K P+ ++LI C D ++EA +
Sbjct: 201 YTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSY 260
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M YN + + LC FR EA +L +M + N+ TFNVL+
Sbjct: 261 MKAKRISPDIFTYNSL---IQGLCN----FRRWKEASALLNEMTSLNIMPNIFTFNVLVD 313
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
+CK + +A +F M E G P+ T+ L+ + E ++ D M + G
Sbjct: 314 AICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKP 373
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +RI++A +F +M G PD+ Y+ L+ C R+ +A LF
Sbjct: 374 DAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLF 433
Query: 439 DEAVRNG 445
NG
Sbjct: 434 KNMHSNG 440
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +LI + ++D A + +M + G + V +N +++ + K+ +
Sbjct: 128 PDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKF------ 181
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
++A + D E +G V T+ +I+ LCKI + A LF +M E GC PN T+ +
Sbjct: 182 -AQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNI 240
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI SL + V E ++ MK+ + Y + LC R ++A ++ +M +
Sbjct: 241 LIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN 300
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
P+ T+++L+ C +V +A +F GVE
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVE 337
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + LI G C GK +A + G + Y I ++ LC+ +
Sbjct: 163 PDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTI---INGLCKIGET--- 216
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ A + ME G NV T+N+LI +LCK + +A+ +F M P+ T+
Sbjct: 217 -TAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNS 275
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI+ L R E +++ M S + + +C ++ +A VF+ M G
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG 335
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY LM + + +A LFD + G + Y +
Sbjct: 336 VEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 7/210 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++LIKG+C ++DEAK+L EM G V YN ++ + +L R +
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLR----- 427
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA+ + +M NG ++ T+++L+ CK A +LF M P+ + +
Sbjct: 428 --EAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNI 485
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI ++ + + + ++ + G + Y + LC +++A+ F M+ DG
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
PD +Y++++ + + +A L E
Sbjct: 546 CPPDEFSYNVIIRGFLQYKDESRAAQLIGE 575
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G D + ++ LC+ G A+ L K+ +N PD +L+ G+C +G L +A
Sbjct: 405 GLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKA 464
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
RL R M + YN ++D + K KD A K+ ++ G+ NV+
Sbjct: 465 FRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKD-------ARKLFSELFVQGLLPNVQI 517
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +I+NLCK ++A++ F M GC P+E ++ V+I+ Q ++I M+
Sbjct: 518 YTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMR 577
Query: 373 SAGYA 377
G+
Sbjct: 578 DRGFV 582
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 14/256 (5%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++V+ +C+ G S A+ + K T + PD L+ G+ + ++ EA++L M
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM 366
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G + +YN + + C+ K R+D EA+++ +M + G+ + +N LI
Sbjct: 367 ITKGCKPDAFSYNIL---IKGYCKAK---RID-EAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LC++ R +A LF M G P+ T+ +L+ + +G+ + M+S
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + +C ++ A +F ++ G P+ + Y ++ C +D+A
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEAL---- 535
Query: 440 EAVRN--GVEVKPKEY 453
EA RN G P E+
Sbjct: 536 EAFRNMEGDGCPPDEF 551
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 35/155 (22%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ ++ T ++LI ++R + A +F +M + G P+ TF LI L
Sbjct: 121 MELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGL----- 175
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
C + + QA+ F+ + G P TY
Sbjct: 176 ------------------------------CKVGKFAQAVEFFDDFEASGCQPTVYTYTT 205
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ C A LF + G + Y +
Sbjct: 206 IINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNI 240
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 9/240 (3%)
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ G+ + AE+LV++ + + L+ GWC GKLDEAK + M V
Sbjct: 173 KTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVV 232
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+N +L R +D F L E ME G P N ++ L+ L R ++A+
Sbjct: 233 FNTLLAGFVADGRFEDAFELARE-------MERRGCPPNAVSYTTLMQGLGARGRVDEAM 285
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
++F M GC P+ T+ L+ + +A R+ +G E +D M G + Y F
Sbjct: 286 RVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAH 345
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
E++E+ + + E+M+ PD Y++++ C +A AL++E N E+ P
Sbjct: 346 EKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETN--ELSP 403
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 7/231 (3%)
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
L + A E+ PD + + L+ G+ DG+ ++A LAREM R G V+Y ++ +
Sbjct: 218 LARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGA 277
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
R EA +V ++M G + T+ L++ CK R + M G
Sbjct: 278 RGRV-------DEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREG 330
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
+ +L + + ++ E E+++RM+ Y + C + +QA+
Sbjct: 331 LRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAV 390
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+++ +M+T+ +P +T+ +++T + +A F + V G+ V P+
Sbjct: 391 ALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQ 441
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 10/280 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ R G + RM+RD G + + +V G+ A K+V+
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKVVES 303
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLC 282
TA PD + ++L G C GK+DEA RL EM R L V YN ++D K
Sbjct: 304 MTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFK-- 361
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+R S+A ++L +M GV + T N+++ +LCK + E+A+ ++ E G
Sbjct: 362 -----WRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ LI + +A V + ++D M G + L LC ++R E A +
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
G PD +Y +M + + A L+D+ +
Sbjct: 477 LHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 120/275 (43%), Gaps = 9/275 (3%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDL 238
+ L E M RD G K + +VV+ LC+ G A KL K + PD +
Sbjct: 366 SDALRLLEEM-RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNT 424
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI +C G + +A L EM G ++ T N +L + K+ R +D AE++L
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYED-------AEELL 477
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
G + ++ +++ K E A++L+ +M E P+ +T+ LIK L +
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRM 537
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E + ++ + G + Y + C +E A KM + PD T
Sbjct: 538 ERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTC 597
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ LM C H ++DKA LF+ V G +V Y
Sbjct: 598 NTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 101/256 (39%), Gaps = 43/256 (16%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ +LL+ C G L +A M G V YN +L+ CRK
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH---CRKG--- 257
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA +L M+ +G+ T+N L+S ++ + A K+ M +G P+ T+
Sbjct: 258 -MLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT-------------------- 388
VL L QA +V E + D M+ A+ Y L
Sbjct: 317 NVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMR 376
Query: 389 ----------------RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
LC ++E+A+ EK+ +G PD TY+ L+ +C V
Sbjct: 377 DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVA 436
Query: 433 KANALFDEAVRNGVEV 448
KA L DE V G+++
Sbjct: 437 KAFTLMDEMVGKGLKM 452
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 14/275 (5%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
D +++ K + T + I L R R + + + + G D+ + +++ C+
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEL-VEKGLVPDETTYNIIIHAYCK 571
Query: 212 NGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
G A + K N PD C+ L+ G C+ GKLD+A +L G ++ +
Sbjct: 572 EGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVIT 631
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
YN + + +C+ D +D+ A DME G+ + T+NV++S L + RSE+A
Sbjct: 632 YNTL---IQSMCKVGD---VDT-ALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD---EMIDRMKSAGYAIGKKDYYEFL 387
+ +++ + G +L S A V E + E K+ A+ + Y E L
Sbjct: 685 NMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL--ETYMERL 742
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
LC ++++A +V ++M G DS TY LM
Sbjct: 743 NGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLM 777
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD+ +++I +C +G L+ A R +M F+ V N +++ LC
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN---GLCLHG--- 608
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+LD +A K+ G +V T+N LI ++CK+ + A+ F M G P+ T+
Sbjct: 609 KLD-KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
V++ +L +A R E M+ ++ +G K F L ++A + K
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSG-----KLSQSFACPLLKPSSADEADVKEHEGKP 722
Query: 409 DGHNPDS------ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ + + ETY + C ++ +A A+ DE ++ G+ V Y
Sbjct: 723 EAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTY 773
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 122/291 (41%), Gaps = 11/291 (3%)
Query: 158 KEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
+E L P + + ID +AG + + M G K D +L V+ LC+
Sbjct: 412 EEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM-VGKGLKMDTFTLNTVLYNLCKMKRY 470
Query: 216 SYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
AE+L+ F PD+ ++ + + + A RL +M YN +
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ LCR + RL +K+ +E VP T+N++I CK E+A +
Sbjct: 531 ---IKGLCRME---RLKEAIDKLNELVEKGLVPDET-TYNIIIHAYCKEGDLENAFRFHN 583
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+M E P+ T L+ L ++ + ++ + G + Y + +C +
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++ A+ F+ M+ G PD+ TY+++++ R ++A+ + + +G
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 8/247 (3%)
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMY 260
L ++ LC++G S A +L N+ F D + + L+ G C GKLDEA R+ +E+
Sbjct: 462 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 521
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
G + V+YN + +S C KK +LD EA L +M G+ + T+++LI L
Sbjct: 522 GRGCVMDRVSYNTL---ISGCCGKK---KLD-EAFMFLDEMVKRGLKPDNYTYSILICGL 574
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ + E+AI+ + G P+ T+ V+I +A R EG E D M S
Sbjct: 575 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 634
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C R+ A+ + E MK G +P+S TY L+ +RV++A LF+E
Sbjct: 635 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 694
Query: 441 AVRNGVE 447
G+E
Sbjct: 695 MRMEGLE 701
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 15/298 (5%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLG-FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
G L + I L + G+ ++ L +F+ + + GF D + ++ LCE G A +
Sbjct: 458 GGGLLTTLISGLCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKLDEAFR 515
Query: 221 LVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ K+ D++ + LI G C KLDEA EM + G + Y+ IL C
Sbjct: 516 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS-ILIC-- 572
Query: 280 KLCRKKDPFRLDSEAEKVLL--DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
F ++ E + D + NG+ +V T++V+I CK R+E+ + F M
Sbjct: 573 ------GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 626
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
PN + LI++ ++ R+ E+ + MK G + Y + + I R+E
Sbjct: 627 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 686
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+A +FE+M+ +G P+ Y L+ + ++ K L E V Y V
Sbjct: 687 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 744
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA K+ ME GV NV TFN +I L R ++A +M E G P T+ +L+
Sbjct: 267 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 326
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
K L +A R+G+ ++ M G+ Y + + +A+ + + M + G +
Sbjct: 327 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 386
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
S TY+ L+ +C + + D A L E + G V +
Sbjct: 387 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 427
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + I +C GK++EA +L +M G V +N ++D + R + F
Sbjct: 245 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 304
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ M G+ + T+++L+ L + +R DA + M + G PN +
Sbjct: 305 MFKEK-------MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 357
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI S +A + + E+ D M S G ++ Y + C + + A + ++M +
Sbjct: 358 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 417
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
G N + ++ ++ C+H +FD A+R
Sbjct: 418 IGFNVNQGSFTSVICLLCSH-------LMFDSALR 445
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 129/325 (39%), Gaps = 12/325 (3%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDF-LVDNKEVLGPKTLASCI-DRLVRAGRPTQVLGFFE 187
+D + + F R + A+ F ++ NK + KT + + LVRA + F+
Sbjct: 180 SDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 239
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVD 246
+ + G D + C+ G A KL K + P+ + +I G +
Sbjct: 240 VVCK--GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 297
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+ DEA +M G E + Y+ ++ +++ R D + VL +M G
Sbjct: 298 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF-------VLKEMTKKGF 350
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P NV +N LI + + AI++ M G +T+ LIK + + +
Sbjct: 351 PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER 410
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ M S G+ + + + + LC + A+ +M +P L++ C
Sbjct: 411 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 470
Query: 427 AHNRVDKANALFDEAVRNGVEVKPK 451
H + KA L+ + + G V +
Sbjct: 471 KHGKHSKALELWFQFLNKGFVVDTR 495
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 13/291 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T + ID L GR + F E+M ER G + + ++V+ L A ++K
Sbjct: 286 TFNTVIDGLGMCGRYDEAFMFKEKMVER--GMEPTLITYSILVKGLTRAKRIGDAYFVLK 343
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + FP + I + LI + G L++A + M G L + YN + + C
Sbjct: 344 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL---IKGYC 400
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ AE++L +M G N +F +I LC + A++ M
Sbjct: 401 KNGQA----DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 456
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P LI L + + + E+ + + G+ + + L LC ++++A +
Sbjct: 457 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 516
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+++ G D +Y+ L++ C ++D+A DE V+ G +KP Y
Sbjct: 517 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG--LKPDNY 565
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 15/225 (6%)
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMY-----RGGFELGTVAYNCILDCVSKLCRKKDPF 288
K+ DLLI+ +C K D LA +++ +G F T N +L + L R + F
Sbjct: 178 KMSDLLIEVYCTQFKRDGC-YLALDVFPVLANKGMFPSKTTC-NILL---TSLVRANE-F 231
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA D+ GV +V F I+ CK + E+A+KLF +M E G PN TF
Sbjct: 232 QKCCEA----FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF 287
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L R E ++M G Y + L +RI A V ++M
Sbjct: 288 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 347
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G P+ Y+ L+ + ++KA + D V G+ + Y
Sbjct: 348 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 392
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD ++I G C + +E + EM + TV YN + + CR
Sbjct: 593 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL---IRAYCRSG- 648
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
RL S A ++ DM++ G+ N T+ LI + I R E+A LF M G PN
Sbjct: 649 --RL-SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 705
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ LI + ++ + + ++ M S K Y + + +A + +M
Sbjct: 706 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 765
Query: 407 KTDGHNPDSETY 418
+ G PDS TY
Sbjct: 766 REKGIVPDSITY 777
>gi|326513918|dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 138/336 (41%), Gaps = 29/336 (8%)
Query: 117 FNHWLTQNANFS----HTDETLSF------FTDYFGRRKDFKAIHDFLVDNKEVLGPKTL 166
F W+ NFS H D L FT + + D +A+ L P T
Sbjct: 98 FLAWIRAKPNFSPSADHFDALLLPLARARLFTHLWTQASDMRAL-------GLPLSPATF 150
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ I + Q + F R+ +G + + +++ LC NG + A KL++ A
Sbjct: 151 SAVISSYGHSRLAEQAVEVFNRLPH-FGCPQTTEVYNALLDALCANGNFAGAYKLLRRMA 209
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ + PD L+ WC GKL EA+ +M GF + ++D + + R +
Sbjct: 210 RKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMATRGFRPPVRGRDLLVDGLVRAGRLE 269
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
EA+ L + GV +V TFN L LC E A+ L G P+
Sbjct: 270 -------EAKAFALRITKEGVLPDVATFNSLAQALCDAGDVEFAVGLLADASSRGMCPDI 322
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+T+ V++ ++ +A R+ E + G+ Y + LC R A + F
Sbjct: 323 STYKVMLPAVAKAGRIEEAFRLFYAAIEDGHRPFPSLYAAIVKALCKAGRFADAFAFFGD 382
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNR--VDKANALFD 439
MK+ GH P+ Y +++ K C +D AN L +
Sbjct: 383 MKSKGHPPNRPVY-VMLVKMCVRGGRFLDAANYLLE 417
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 5/187 (2%)
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL +A +V + + G P+ E +N L+ LC A KL RM G P+ TF
Sbjct: 161 RLAEQAVEVFNRLPHFGCPQTTEVYNALLDALCANGNFAGAYKLLRRMARKGVAPDRATF 220
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + ++ E +D M + G+ + + L R+E+A + ++
Sbjct: 221 STLVDAWCASGKLREAQAFLDDMATRGFRPPVRGRDLLVDGLVRAGRLEEAKAFALRITK 280
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
+G PD T++ L C V+ A L +A G+ Y+V P K
Sbjct: 281 EGVLPDVATFNSLAQALCDAGDVEFAVGLLADASSRGMCPDISTYKV-----MLPAVAKA 335
Query: 469 GKKRETL 475
G+ E
Sbjct: 336 GRIEEAF 342
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
DM G+P + TF+ +IS+ R +E A+++F R+ +GC + L+ +L
Sbjct: 137 DMRALGLPLSPATFSAVISSYGHSRLAEQAVEVFNRLPHFGCPQTTEVYNALLDALCANG 196
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+++ RM G A + + + C ++ +A + + M T G P D
Sbjct: 197 NFAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMATRGFRPPVRGRD 256
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
LL+ R+++A A + GV
Sbjct: 257 LLVDGLVRAGRLEEAKAFALRITKEGV 283
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 9/187 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D LVRAGR + F R+ ++ G D + + + LC+ G +A L+ D ++
Sbjct: 259 VDGLVRAGRLEEAKAFALRITKE-GVLPDVATFNSLAQALCDAGDVEFAVGLLADASSRG 317
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +++ G+++EA RL G Y I+ + K R D F
Sbjct: 318 MCPDISTYKVMLPAVAKAGRIEEAFRLFYAAIEDGHRPFPSLYAAIVKALCKAGRFADAF 377
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
DM+ G P N + +L+ + R DA M E G P TF
Sbjct: 378 -------AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLLEMSEAGFAPRAPTF 430
Query: 349 LVLIKSL 355
V++ L
Sbjct: 431 NVVVDGL 437
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 8/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC+ G L + + + P+ +LI G C GK+D A + + M G
Sbjct: 218 LINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQG 277
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
V YN + ++ LC+ D EA +++ +M +G+ + TF LI CK
Sbjct: 278 VRPDLVTYNAL---INGLCKVGDL----KEARRLVNEMSASGLRPDRITFTTLIDGCCKY 330
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
E A+++ RM E G ++ F VLI L + RV + + M+ M SAG+ Y
Sbjct: 331 GDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTY 390
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C + + ++M++DGH P TY+ LM C +V A L D +
Sbjct: 391 TMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLN 450
Query: 444 NGVEVKPKEYRV 455
GV Y +
Sbjct: 451 VGVAPNDITYNI 462
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 9/266 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ L + GR + F+ M G + + ++++ C+ G A K +
Sbjct: 214 TFSALINGLCKEGRLDEGSLLFDEM-CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQM 272
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + PD + LI G C G L EA+RL EM G + + ++D C+
Sbjct: 273 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLID---GCCK 329
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D A ++ M G+ + F VLIS LC+ R DA ++ M G P
Sbjct: 330 YGDM----ESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKP 385
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
++ T+ +++ + V G +++ M+S G+ G Y + LC +++ A +
Sbjct: 386 DDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLL 445
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHN 429
+ M G P+ TY++L+ H
Sbjct: 446 DAMLNVGVAPNDITYNILLEGHSKHG 471
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++L+ G+C G + A+ + E+ + G V++N ++ K ++ FRL
Sbjct: 146 NVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGV--- 202
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
ME V +V TF+ LI+ LCK R ++ LF M G PN TF VLI
Sbjct: 203 ----MESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQC 258
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ +V + M + G Y + LC + +++A + +M G PD
Sbjct: 259 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRI 318
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
T+ L+ C + ++ A + V G+E+ + V
Sbjct: 319 TFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTV 357
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 135/307 (43%), Gaps = 9/307 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR +D + D ++D + + I+ + GR +V + E G D+ S
Sbjct: 284 GRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYR-GVNLDEYS 342
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
+V+ C G+ + A + F + + L+ G+C G +D+A +L M
Sbjct: 343 YNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLML 402
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ G ++ + +LD K + + L E G+ RNV T N +I+ L
Sbjct: 403 KRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLA-------RGLARNVVTINTVINGL 455
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK RR +A +LF+RM EW C + T+ LI + +G ++ M++ G+
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + F+T L ++ + + +M G +P++ TY L+ WC + A L+ E
Sbjct: 516 EMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFE 575
Query: 441 AVRNGVE 447
V G++
Sbjct: 576 MVEKGLK 582
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 37/304 (12%)
Query: 165 TLASCIDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+ ++ +D +AG+ Q L + E + R G R+ ++ V+ LC+N + AE+L
Sbjct: 412 SCSTLLDGFFKAGKTEQALNLWKETLAR--GLARNVVTINTVINGLCKNRRMTEAEELFH 469
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
P D + LI G+C G L A ++ EM GF +N ++ L
Sbjct: 470 RMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSF---ITGLF 526
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
K +++ + ++M G+ N T+ LI+ CK DA L++ M E G
Sbjct: 527 IAKQSGKVND----IRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLK 582
Query: 343 PNETTFLVLIKSLYQAARVGEGD---------EMIDRMKSAGYAIGKKDYY--------- 384
PN VL+ Y+ +V E + +MI ++ IGK +
Sbjct: 583 PNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNH 642
Query: 385 --------EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ LC + R+ A ++FE +K G PD+ TY L+ A +D A
Sbjct: 643 QSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFG 702
Query: 437 LFDE 440
L DE
Sbjct: 703 LRDE 706
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 135/289 (46%), Gaps = 15/289 (5%)
Query: 164 KTLASC---IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
+TL SC +++LV+AG + F++M R G D ++ ++ + C +G ++A
Sbjct: 127 RTLRSCNRLLNQLVQAGDIGTAVAVFQQM-RCAGTLPDDFTVAIMAKAYCRDGRVAHAAD 185
Query: 221 LVKDTANEIFPDDKIC--DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+K+ E+ D + ++ G+C G+ + A++L + G V Y + V
Sbjct: 186 FLKEM-EEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLL---V 241
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
C++ R++ EAEKV+ +++ N + + + LI+ C+ R EDA ++ M
Sbjct: 242 KGYCKEG---RME-EAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMI 297
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ G N + +I + R+GE ++++ + G + + Y + C +
Sbjct: 298 DAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMT 357
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+A + M +G + TY+ L+ +C+ +D A L+ ++ GV
Sbjct: 358 KAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGV 406
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 222 VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
V+ +A + P+ LI GWC +G L +A L EM G + + ++ C +
Sbjct: 539 VEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYRE 598
Query: 282 CRKKDP-FRLDSEAEKVLLD------MEYNGVPRNVET------------FNVLISNLCK 322
+ + L A+ ++ + V +E+ +N++I LCK
Sbjct: 599 GKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCK 658
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ R DA LF + G P+ T+ LI + + + D M SA
Sbjct: 659 LGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVT 718
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC + +A+S+F K+++ G +P++ TY+ L+ C +A L + +
Sbjct: 719 YNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMI 778
Query: 443 RNGVE 447
+ G++
Sbjct: 779 KEGIQ 783
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A V +M G R + + N L++ L + A+ +F +M G P++ T ++
Sbjct: 112 DALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMA 171
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
K+ + RV + + M+ G + Y+ + C I + E A + ++ G +
Sbjct: 172 KAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLS 231
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
P+ TY LL+ +C R+++A + E N
Sbjct: 232 PNVVTYTLLVKGYCKEGRMEEAEKVVKEIKEN 263
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I G C G++ +A+ L ++ GF Y+ ++ S F L E
Sbjct: 650 NIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDE--- 706
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
M + N+ T+N LI LCK A+ LF ++ G PN T+ LI
Sbjct: 707 ----MLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHC 762
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ E ++ +M G Y + LC +E+A+ + ++M + +P+
Sbjct: 763 KDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFI 822
Query: 417 TYDLLMTKWCAHNRVDKANALFDE 440
TY L+ + + L++E
Sbjct: 823 TYWTLIQGYARCGNMKAITKLYNE 846
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 29/201 (14%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+V+ LC+ G + A L +D + F PD+ LI G G +D A L EM
Sbjct: 651 IVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSA 710
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRL----------------------------DSEA 294
V YN ++ + K C L +EA
Sbjct: 711 RLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEA 770
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
K+ M G+ V T+ +LI LC E+AIKL +M E PN T+ LI+
Sbjct: 771 FKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQG 830
Query: 355 LYQAARVGEGDEMIDRMKSAG 375
+ + ++ + M G
Sbjct: 831 YARCGNMKAITKLYNEMHICG 851
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 9/283 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
I L +AG+ + F M++ GF D + VV+ C++G A E L +
Sbjct: 66 IHGLTKAGQARETSSIFHAMKQR-GFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKH 124
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P +I G +LDEA L E G EL + Y+ ++D K+ R
Sbjct: 125 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR----- 179
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+D EA +L +M G+ NV T+N L+ L K +A+ F M E C PN T+
Sbjct: 180 -ID-EAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTY 237
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + + + M+ G Y ++ L + I A S+FE+ K
Sbjct: 238 SILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKA 297
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+G PD+ +++ L+ NR +A +F+E G + K
Sbjct: 298 NGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVK 340
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 7/217 (3%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD + +LI G G+ E + M + GF L AYN ++D C+ +
Sbjct: 56 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVD---GFCKSG---K 109
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+D +A + L +M+ VP V T+ +I L KI R ++A LF G N +
Sbjct: 110 VD-KAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYS 168
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI + R+ E +++ M G A + + L E I +A+ F+ MK
Sbjct: 169 SLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEM 228
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+P++ TY +L+ C + +KA + E + G+
Sbjct: 229 KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 265
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 11/188 (5%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+ K+ +M G ++ N + + K E +F + +G P+ ++ +LI
Sbjct: 7 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 66
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L +A + E + MK G+A+ + Y + C ++++A E+MK
Sbjct: 67 HGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVP 126
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYLK 461
P TY ++ +R+D+A LF+EA G+E+ Y R+D YL
Sbjct: 127 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 186
Query: 462 KPIAVKKG 469
+KKG
Sbjct: 187 LEEMMKKG 194
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 141/306 (46%), Gaps = 9/306 (2%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR ++++ ++ + + T I+ L + G+ + E M + +GF +
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM-KAWGFSPSVIT 266
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ C+ G A+ L+K+ A I P++ ++LI G+C D + AK++ EM
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
R G + V YN + ++ LC +LD EA + M G+ NV T+N LI+
Sbjct: 327 RQGLQPNVVTYNSL---INGLCSNG---KLD-EALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + ++A ++ +G+ G PN TF LI + +A R+ + + M G
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C +++A + ++M+ +G D TY++L+ C KA L DE
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499
Query: 441 AVRNGV 446
G+
Sbjct: 500 MFEVGL 505
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 197/514 (38%), Gaps = 73/514 (14%)
Query: 12 LLLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSK----PTSNPKTIDDP--DQVIAR 65
L L Q P R +S T F P LN PFSS T N T D P Q+IA+
Sbjct: 4 LRLTQFPKRCLS---TRFPSLDPK--LNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAK 58
Query: 66 SLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFN------H 119
+L + + + P S HL S P L+ ++ + AI H
Sbjct: 59 QHWSKL-KTIVKETNPSSLLQHLFNSE--AQPDLILCYFKWTQKEFGAIHNVEQFCRLLH 115
Query: 120 WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCI--DRLVRA- 176
L N++ L D F + + + + + VLG A+ I D LV A
Sbjct: 116 LLANAKNYNKIRALL----DSFAKNAHYS--NSTIFHSLSVLGSWGCANSIIVDMLVWAY 169
Query: 177 ---GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD 233
G L F+R DYGF+ S ++ L + G E + K+ +
Sbjct: 170 VKNGEMDLALEGFDR-AGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVN 228
Query: 234 KIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD- 291
+ D++I G C GK +A + +M GF + YN I+D C+ F+ D
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID---GYCKAGKMFKADA 285
Query: 292 ------------------------------SEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
+ A+KV +M+ G+ NV T+N LI+ LC
Sbjct: 286 LLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLC 345
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ ++A+ L +M G PN T+ LI + + E EM+D + G A
Sbjct: 346 SNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVI 405
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
+ + R++ A + M G P+ TY+ L+ +C V +A L E
Sbjct: 406 TFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM 465
Query: 442 VRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
NG++ Y + L KKG+ R+ +
Sbjct: 466 EGNGLKADLVTYNILVDAL-----CKKGETRKAV 494
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 30/281 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
ID R T FE M+R G + + + ++ LC NG A L K +
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQ-GLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ + LI G+C L EA+ + ++ + G + +N ++D K R D F
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 289 RLDS----------------------------EAEKVLLDMEYNGVPRNVETFNVLISNL 320
L S EA K+ +ME NG+ ++ T+N+L+ L
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + A++L M E G +P+ T+ LI ++ + M+ G
Sbjct: 485 CKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANI 544
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
Y + C ++E+A + +M G P+ TYD+L
Sbjct: 545 VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 9/275 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ ++ I+ + G +VL E M+ G K + + V+ LC+ G + AE+++++
Sbjct: 290 SYSTVINGYCQVGELQRVLKLIEEMQIK-GLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+E I PD I LI G+C G + A RL EM + + Y + + LC+
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAV---ICGLCQ 405
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
EA+K+ +M + + T+ LI CK + ++A L +M + G P
Sbjct: 406 TGRVM----EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP 461
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ L L + V +E++ M G + Y + LC I+QA+ +
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM 521
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ M+ G +PD+ TY LM +C + +A+ L
Sbjct: 522 KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 109/263 (41%), Gaps = 8/263 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLD 250
+ G + S ++ LC+ G A +L+ + PD +I G+C G+L
Sbjct: 246 EVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQ 305
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+L EM G + YN + + LC+ +EAE+VL +M G+ +
Sbjct: 306 RVLKLIEEMQIKGLKPNPYTYNGV---ILLLCKTGKV----AEAERVLREMISEGIAPDG 358
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+ LI CK+ A +LF M + P+ T+ +I L Q RV E D++
Sbjct: 359 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHE 418
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M + Y + C ++++A S+ +M G P+ TY L C
Sbjct: 419 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 478
Query: 431 VDKANALFDEAVRNGVEVKPKEY 453
VD AN L E R G+E+ Y
Sbjct: 479 VDTANELLHEMCRKGLELNIYTY 501
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 123/320 (38%), Gaps = 44/320 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID + G + F+ M++ D + V+ LC+ G A+KL +
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD+ LI G+C +GK+ EA L +M + G V Y + D + K C + D
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK-CGEVDT- 481
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT- 347
A ++L +M G+ N+ T+N L++ LCK + A+KL M G HP+ T
Sbjct: 482 -----ANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536
Query: 348 ----------------------------------FLVLIKSLYQAARVGEGDEMIDRMKS 373
F VL+ + + +G++++ M
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 596
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + + C + ++ M G PD TY++L+ C + +
Sbjct: 597 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 656
Query: 434 ANALFDEAVRNGVEVKPKEY 453
A L + V G + Y
Sbjct: 657 AWFLHRDMVGKGFNLTVSSY 676
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 7/227 (3%)
Query: 214 YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
+ + E+L+ T + D ++ D+ + G LDEA++L +M G + + N
Sbjct: 164 FGHFVEQLIY-TYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNL 222
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
+S L D ++ A KV ++ GV N ++N++ +LC++ R +A +L
Sbjct: 223 F---ISHLSEDLDGIKI---ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLL 276
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
+M GC P+ ++ +I Q + ++I+ M+ G Y + LC
Sbjct: 277 LQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKT 336
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
++ +A V +M ++G PD Y L+ +C V A LFDE
Sbjct: 337 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 383
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 24/257 (9%)
Query: 214 YASYAEKLVK----DTANEIFPDDKIC-----------DLLIKGWCVDGKLDEAKRLARE 258
Y + A+ L K DTANE+ + +C + L+ G C G +D+A +L ++
Sbjct: 466 YTALADGLCKCGEVDTANELLHE--MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 523
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M GF V Y ++D C+ ++ R A ++L M + V TFNVL++
Sbjct: 524 MEVAGFHPDAVTYTTLMD---AYCKSREMVR----AHELLRQMLDRELQPTVVTFNVLMN 576
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C ED KL M E G PN TT+ LIK + E+ M + G
Sbjct: 577 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 636
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A + M G N +Y+ L+ + + +A LF
Sbjct: 637 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 696
Query: 439 DEAVRNGVEVKPKEYRV 455
++ R G+ + Y +
Sbjct: 697 EQMRREGLVADREIYNI 713
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 15/305 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ K+ ++H+ ++ T + D L + G M R G + + +
Sbjct: 442 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK-GLELNIYT 500
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+V LC+ G A KL+KD F PD L+ +C ++ A L R+M
Sbjct: 501 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 560
Query: 261 RGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
+ V +N +++ C+S + + EK+L M G+ N T+N LI
Sbjct: 561 DRELQPTVVTFNVLMNGFCMSGMLE---------DGEKLLKWMLEKGIMPNATTYNSLIK 611
Query: 319 NLCKIRRSEDAIKLFYR-MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C IR + A YR M G P+ T+ +LIK +A + E + M G+
Sbjct: 612 QYC-IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 670
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y + ++ +A +FE+M+ +G D E Y++ +++ L
Sbjct: 671 LTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 730
Query: 438 FDEAV 442
DEA+
Sbjct: 731 CDEAI 735
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED------AIKLFYRMGEWGCHPNET 346
EA K+ M G+ +V++ N+ IS+L SED A+K+F E G N
Sbjct: 200 EARKLFDKMLNYGLLISVDSCNLFISHL-----SEDLDGIKIALKVFVEFPEVGVCWNTA 254
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
++ ++ SL Q RV E +++ +M+ G Y + C + +++ + + E+M
Sbjct: 255 SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ G P+ TY+ ++ C +V +A + E + G+
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 354
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 8/243 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC+ GY A +L+ + P+ +LI +C +G+L+EA+ + EM G
Sbjct: 20 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 79
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
L V YNC+ +S LC+ + +A + DM G ++ TFN LI LCK+
Sbjct: 80 LALNAVGYNCL---ISALCKDEKV----QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ E+A+ L+ M G N T+ LI + + + E ++++ M G + Y
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 192
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC IE+ +++FE M + G NP++ + ++L+ C + A + +
Sbjct: 193 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 252
Query: 444 NGV 446
G+
Sbjct: 253 RGL 255
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 19/304 (6%)
Query: 153 FLVDNKEVLGPKTLASC----------IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+LV +E++ + C IDR + GR + + M G +
Sbjct: 29 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNAVGY 87
Query: 203 RLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ LC++ A + D +++ PD + LI G C K +EA L ++M
Sbjct: 88 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 147
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G T+ YN + + R+ EA K++ DM + G P + T+N LI LC
Sbjct: 148 EGVIANTITYNTL---IHAFLRRGAM----QEALKLVNDMLFRGCPLDDITYNGLIKALC 200
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ E + LF M G +PN + +LI L + + E + M G
Sbjct: 201 RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 260
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + LC R ++A+++F+K++ +G PD+ TY+ L++ C D A+ L
Sbjct: 261 TYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 320
Query: 442 VRNG 445
V +G
Sbjct: 321 VDSG 324
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G ++ T+N LI LCK A +L M GC PN T+ +LI + R+ E
Sbjct: 9 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++D M G A+ Y ++ LC E+++ A+++F M + G PD T++ L+
Sbjct: 69 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 128
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
C N+ ++A L+ + + GV Y
Sbjct: 129 LCKVNKFEEALGLYQDMLLEGVIANTITYN 158
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + + + LG ++ M + G + + ++ G A KLV D
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLE-GVIANTITYNTLIHAFLRRGAMQEALKLVND 179
Query: 225 TANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P DD + LIK C G +++ L +M G ++ N + ++ LCR
Sbjct: 180 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL---INGLCR 236
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A + L DM + G+ ++ T+N LI+ LCK R+++A+ LF ++ G P
Sbjct: 237 TGNI----QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 292
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ T+ LI + + ++ R +G+ + +Y ++
Sbjct: 293 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSN 338
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A +++ +M+ G NV T+ +LI CK R E+A + M G N + LI
Sbjct: 33 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 92
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMKTDG 410
+L + +V + M M S G K D + F + LC + + E+A+ +++ M +G
Sbjct: 93 ALCKDEKVQDALNMFGDMSSKGC---KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 149
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
++ TY+ L+ + + +A L ++ + G + Y + L + ++KG
Sbjct: 150 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 208
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 9/284 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T + I L G+ + L F++M D GF+ + + ++ LC+ G S A +L+
Sbjct: 126 PTTFTTLIRGLCVEGKIGEALHLFDKM-IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 184
Query: 223 KDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ PD I +I C D ++ EA L +M G Y ++ + L
Sbjct: 185 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 244
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C K +L M + + +V F+ ++ LCK + +A ++ M + G
Sbjct: 245 CEWK-------HVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 297
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ T+ L+ + + E ++ D M G+A Y + C I +I++AM
Sbjct: 298 EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMY 357
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+FE+M PD++TY+ LM C R+ A ALF E V G
Sbjct: 358 LFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 133/318 (41%), Gaps = 12/318 (3%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKD 224
A + + + + VL +M+ +G + +L +++ C +A L K
Sbjct: 59 FAKLLTSIAKMKHYSTVLSLSTQMD-SFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI 117
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
PD LI+G CV+GK+ EA L +M GF+ V Y + ++ LC+
Sbjct: 118 LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL---INGLCKV 174
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ S A ++L ME +V + +I +LCK R+ +A LF +M G P+
Sbjct: 175 GNT----SAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 230
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ L+ +L ++++M ++ + + LC ++ +A + +
Sbjct: 231 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 290
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI 464
M G PD TY LM C + +D+A +FD VR G Y +
Sbjct: 291 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT---LINGYC 347
Query: 465 AVKKGKKRETLPEKMARK 482
+ K K L E+M RK
Sbjct: 348 KIHKIDKAMYLFEEMCRK 365
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 13/292 (4%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S ID L + + T+ F +M G D + +V LC + L+
Sbjct: 200 TSIIDSLCKDRQVTEAFNLFSQMVGQ-GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 258
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N +I PD I ++ C +GK+ EA + M + G E V Y ++D C +
Sbjct: 259 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD---GHCLQS 315
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG--EWGCHP 343
+ EA KV M G +V ++ LI+ CKI + + A+ LF M EW P
Sbjct: 316 EM----DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW--IP 369
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ L+ L R+ + + M + G Y L LC +E+AM++
Sbjct: 370 DTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALL 429
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ ++ NPD + Y++++ C ++ A LF G+ Y +
Sbjct: 430 KAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 481
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 115/237 (48%), Gaps = 8/237 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV+ LC+ G + A ++V + PD L+ G C+ ++DEA ++ M R G
Sbjct: 272 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F ++Y +++ K+ + L E + E+ +P + +T+N L+ LC +
Sbjct: 332 FAPDVISYTTLINGYCKIHKIDKAMYLFEE----MCRKEW--IP-DTKTYNTLMHGLCHV 384
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R +DAI LF+ M G P+ T+ +L+ SL + + E ++ ++++ + Y
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ +C +E A +F + + G +P TY++++ C +++AN LF E
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 9/293 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V++K + ++ +D L + G+ T+ + M + G + D + +++ C
Sbjct: 257 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ-RGVEPDVVTYTTLMDGHCLQS 315
Query: 214 YASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A K+ + F D I LI G+C K+D+A L EM R + T YN
Sbjct: 316 EMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 375
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ + + R +D L E M G ++ T+++L+ +LCK E+A+ L
Sbjct: 376 TLMHGLCHVGRLQDAIALFHE-------MVARGQMPDLVTYSILLDSLCKNCHLEEAMAL 428
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
+ +P+ + ++I + +A + ++ + S G Y + LC
Sbjct: 429 LKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCK 488
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ +A +F +M + +PD TY+ + + +N +A L +E + G
Sbjct: 489 RGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 541
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 30/221 (13%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWC 244
F+ M R GF D S ++ C+ A L ++ E PD K + L+ G C
Sbjct: 324 FDMMVRK-GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLC 382
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-----------DSE 293
G+L +A L EM G V Y+ +LD + K C ++ L D +
Sbjct: 383 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQ 442
Query: 294 AEKVLLD-----------------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+++D + G+ +V T+N++I LCK +A KLF M
Sbjct: 443 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C P+ T+ + + Q ++++ M + G++
Sbjct: 503 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 543
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P ++ F L++++ K++ + L +M +G PN T +LI S RVG
Sbjct: 53 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 112
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ ++ G+ + + LC +I +A+ +F+KM +G P+ TY L+ C
Sbjct: 113 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 172
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 9/299 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L + + T+ L F M G D + ++ LC + L+ +
Sbjct: 163 TYGTLMNGLCKDRQLTEALNLFSEMIAK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNE 221
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++I P+ ++++ C +GK+ EA + M +GG E V Y ++D C
Sbjct: 222 MVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD---GHCL 278
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + EA KV M NG NV ++N LI+ CKI+R + A+ LF M P
Sbjct: 279 RSEM----DEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIP 334
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L R+ + + + M + G Y L LC R+ +AM++
Sbjct: 335 NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+ ++ +PD + Y++ + C ++ A LF G++ + + R L K
Sbjct: 395 KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 9/265 (3%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDL 238
+ VL ++M+ +G D +L +V+ C +A L K PD
Sbjct: 73 STVLSLSKKMD-SFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTT 131
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L++G CV GK+ EA + +M GF+ V Y +++ LC+ R +EA +
Sbjct: 132 LVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMN---GLCKD----RQLTEALNLF 184
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G+ ++ T+N LI LC + + L M + PN + +++ +L +
Sbjct: 185 SEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKE 244
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+V E +++D M G Y + C +++A+ VF+ M +G + +Y
Sbjct: 245 GKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSY 304
Query: 419 DLLMTKWCAHNRVDKANALFDEAVR 443
+ L+ +C R+DKA LF+E R
Sbjct: 305 NTLINGYCKIQRIDKAMYLFEEMCR 329
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
SL +VV+ LC+ G + A +V + PD L+ G C+ ++DEA ++ M
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
R G V+YN +++ K+ R L E + L +P N T++ LI
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL------IP-NTMTYSTLIHG 345
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LC + R +DAI LF M G PN T+ +L+ L + R+ E ++ ++ +
Sbjct: 346 LCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPD 405
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ Y + +C +E A +F + G PD T+++++ C +D+A+ LF
Sbjct: 406 VQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFR 465
Query: 440 EAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
E NG Y + L + K + + L E +AR
Sbjct: 466 EMDENGCLRNGCTYNTITQGLLQ--NNKTSRAIQLLEEMLAR 505
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 74/146 (50%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ G+P +V T ++I++ C + R + A+ + ++ + G P+ TF L++ L +
Sbjct: 82 MDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGK 141
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+GE ++ D+M G+ Y + LC ++ +A+++F +M G +PD TY+
Sbjct: 142 IGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNS 201
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
L+ C L +E V++ +
Sbjct: 202 LIHALCNLCEWKHVTTLLNEMVKSKI 227
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P + F L++++ K++ + L +M +G P+ T ++I S RV
Sbjct: 53 PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALS 112
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ ++ G+ + + LC + +I +A+ VF+KM +G P+ TY LM C
Sbjct: 113 VLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLC 172
Query: 427 AHNRVDKANALFDEAVRNGVE 447
++ +A LF E + G+
Sbjct: 173 KDRQLTEALNLFSEMIAKGIS 193
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
E+ P+ LI G C G+L +A L EM G V Y+ +LD LC+
Sbjct: 331 ELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLD---YLCKNH-- 385
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RL +EA +L +E + + +V+ +N+ I +C+ E A LF + G P+ T
Sbjct: 386 -RL-AEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWT 443
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++I+ L + + E ++ M G Y L + +A+ + E+M
Sbjct: 444 HNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEML 503
Query: 408 TDGHNPDSETYDLLM 422
G + D T LL+
Sbjct: 504 ARGFSADVSTTALLV 518
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 148 KAIHDFLVDNKEVLGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
KA++ F ++ L P T+ ++ I L GR + F M G + + ++
Sbjct: 319 KAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVA-CGQIPNLVTYSIL 377
Query: 206 VEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ LC+N + A L+K + + PD ++ ++ I G C G L+ A+ L + G
Sbjct: 378 LDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGL 437
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ +N + + LC++ L EA K+ +M+ NG RN T+N + L +
Sbjct: 438 QPDVWTHNIM---IRGLCKRG----LLDEASKLFREMDENGCLRNGCTYNTITQGLLQNN 490
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++ AI+L M G + +T +L+K L
Sbjct: 491 KTSRAIQLLEEMLARGFSADVSTTALLVKML 521
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+DA+ F+RM P F L+ S+ + + +M S G
Sbjct: 38 DDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIV 97
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ C + R++ A+SV K+ GH PD+ T+ L+ C ++ +A +FD+ V G
Sbjct: 98 INSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGF 157
Query: 447 EVKPKEY 453
+ Y
Sbjct: 158 QPNVVTY 164
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 18/293 (6%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A C DRL Q +G M R G + D + ++ LC+ A +L+ +
Sbjct: 124 ALCADRL-----ADQAVGLLRSM-RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
I P+ + L++G+C G+ ++ ++ EM G E V Y ++D + K+ + K
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+A V+ M G+ NV T+NVLI+ +CK ++AI + +M E G P+
Sbjct: 238 -------KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDV 290
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSV 402
T+ LIK L + E +++ M G I K + F + LC I R+ QA V
Sbjct: 291 VTYNTLIKGLSDVLEMDEAMWLLEEMVR-GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M+ G + TY+LL+ ++V KA L DE G+E Y +
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 21/296 (7%)
Query: 162 GPKTLASCIDRLVRA---GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
G A+C++R +R G T +L + RD S V+ LC G+ A
Sbjct: 44 GRAEAAACLNRHLRLLPLGEATSLLDALPSV-------RDAVSYNTVLTALCRRGHHDRA 96
Query: 219 EKLVKDTANE----IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
L++ + E P+ +L++ C D D+A L R M G V Y +
Sbjct: 97 GALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTL 156
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ LC D +D E ++ +M +G+ NV ++ L+ CK R ED K+F
Sbjct: 157 ---IRGLC---DAAEVDKAVE-LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFV 209
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M E G P+ + LI SL + + + ++D M G Y + +C
Sbjct: 210 EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEG 269
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+++A+ V +KM G PD TY+ L+ +D+A L +E VR VKP
Sbjct: 270 SVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKP 325
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 11/281 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+S + ++GR V F M + G + D +++ LC+ G A A ++
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMS-EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ P+ ++LI C +G + EA + ++M G V YN ++ +S
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLS------ 301
Query: 286 DPFRLDSEAEKVLLDM--EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D +D EA +L +M N V NV TFN +I LC I R A ++ M E GC
Sbjct: 302 DVLEMD-EAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +LI L + +V + E++D M S G Y + C + ++++A +
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
M+ G P+ Y L+ C +++A LF+E N
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN 461
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 131/313 (41%), Gaps = 45/313 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L + G+ + G + M R G + + + +++ +C+ G A ++K + +
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVR-RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG--FELGTVAYNCILDCVSKLCRKKD 286
+ PD + LIKG ++DEA L EM RG + V +N ++ + + R +
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
F++ + ME G N+ T+N+LI L ++ + A++L M G P+
Sbjct: 346 AFQVRAM-------MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF 398
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +LIK + +V ++++ M+ G Y L +C +E+A ++F +M
Sbjct: 399 TYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458
Query: 407 KTD----------------------------------GHNPDSETYDLLMTKWCAHNRVD 432
+ G PD+ TY +++ + ++
Sbjct: 459 DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDME 518
Query: 433 KANALFDEAVRNG 445
AN + + +G
Sbjct: 519 AANGVLKQMTASG 531
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR---NVETFNVLISNLCKIR 324
V+YN +L + LCR+ R A +L M P N ++ VL+ LC R
Sbjct: 77 AVSYNTVL---TALCRRGHHDR----AGALLRAMSLEPHPACRPNAVSYTVLMRALCADR 129
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
++ A+ L M G + T+ LI+ L AA V + E++ M +G Y
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
L C R E VF +M G PD Y L+ C + KA+ + D VR
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249
Query: 445 GVEVKPKEYRVDPRYLKKPIAVKKG 469
G+E Y V + K +VK+
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEA 274
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 200/524 (38%), Gaps = 71/524 (13%)
Query: 12 LLLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSK----PTSNPKTIDDP--DQVIAR 65
L L Q P R +S T F P LN PFSS T N T D P Q+IA+
Sbjct: 4 LRLTQFPKRCLS---TRFPSLDPK--LNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAK 58
Query: 66 SLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFN------H 119
+L + + + P S HL S P L+ ++ + AI H
Sbjct: 59 QHWSKL-KTIVKETNPSSLLQHLFNSE--AQPDLILCYFKWTQKEFGAIHNVEQFCRLLH 115
Query: 120 WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCI--DRLVRA- 176
L N++ L D F + + + + + VLG A+ I D LV A
Sbjct: 116 LLANAKNYNKIRALL----DSFAKNAHYS--NSTIFHSLSVLGSWGCANSIIVDMLVWAY 169
Query: 177 ---GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD 233
G L F+R DYGF+ S ++ L + G E + K+ +
Sbjct: 170 VKNGEMDLALEGFDR-AGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVN 228
Query: 234 KIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD- 291
+ D++I G C GK +A + +M GF + YN I+D C+ F+ D
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID---GYCKAGKMFKADA 285
Query: 292 ------------------------------SEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
+ A+KV +M+ G+ NV T+N LI+ LC
Sbjct: 286 LLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLC 345
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ ++A+ L +M G PN T+ LI + + E EM+D + G A
Sbjct: 346 SNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVI 405
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
+ + R++ A + M G P+ TY+ L+ +C V +A L E
Sbjct: 406 TFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM 465
Query: 442 VRNGVEVKPKEYRVDPRYLKKPIAVKKGKK---RETLPEKMARK 482
NG++ Y + L K +K + TL EK R+
Sbjct: 466 EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRR 509
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 110/256 (42%), Gaps = 12/256 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
ID R T FE M+R G + + + ++ LC NG A L K +
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQ-GLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ + LI G+C L EA+ + ++ + G + +N ++D K R D F
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L S ++LD GV NV T+N LI C+ ++A KL M G + T+
Sbjct: 425 LLRS----MMLD---TGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY 477
Query: 349 LVLIKSLYQAARVGEGDEMIDRM---KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+L+ +L + + ++D M + G Y + C ++E+A + +
Sbjct: 478 NILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNE 537
Query: 406 MKTDGHNPDSETYDLL 421
M G P+ TYD+L
Sbjct: 538 MLEKGLIPNRTTYDIL 553
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + ++D T I R G + + ME + G K D +
Sbjct: 418 GRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN-GLKADLVT 476
Query: 202 LRLVVEKLCENGYASYAEKLVKDT---------ANEIFPDDKICDLLIKGWCVDGKLDEA 252
++V+ LC+ G A +L+ + AN + ++LIKG+C GKL+EA
Sbjct: 477 YNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIV-----TYNVLIKGFCNKGKLEEA 531
Query: 253 KRLAREMYRGGFELGTVAYNCILD 276
RL EM G Y+ + D
Sbjct: 532 NRLLNEMLEKGLIPNRTTYDILRD 555
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 131/308 (42%), Gaps = 42/308 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L RAGR LG + +M + D + +V L + A +++++ +
Sbjct: 12 IGGLCRAGRLRHALGVYRQMNDAH--PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSAR 69
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD+ ++++ C+ ++D+A+ L EM G + Y+ ++D LC+ +
Sbjct: 70 HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD---GLCKCE--- 123
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RLD EA ++ M G V T+N +I+ C+ RR ++A +M GCHP+ T+
Sbjct: 124 RLD-EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITY 182
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE---- 404
LI ++ VG G E++ + G+ Y + LC R+ A+ +FE
Sbjct: 183 TALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC 242
Query: 405 ----------------------------KMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
KM D PD TY LM+ +C R+D A
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302
Query: 437 LFDEAVRN 444
LF + V N
Sbjct: 303 LFQQMVAN 310
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 133/312 (42%), Gaps = 45/312 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD----------YGFKRDKD---SLRLV------ 205
T ++ ID L +AGR + FE M G+ R D ++RL+
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 275
Query: 206 ------------VEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
+ C+ G A +L + AN++ PD L+ G C +G++++A
Sbjct: 276 KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 335
Query: 253 KRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
L E+ R G YNC++D C + RK AE+++ D G N
Sbjct: 336 LELLEEITRRGCPPTIYTYNCVVDGYCKANQVRK---------AEELVADFRSRGFVPNT 386
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWG--CHPNETTFLVLIKSLYQAARVGEGDEMI 368
T+N+L++ C+ R++ A++ ++ G C + + +++ +L + R + +
Sbjct: 387 VTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFY 446
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M GY + + LC + +QA + E+M GH P T D +++ +C
Sbjct: 447 EEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRA 506
Query: 429 NRVDKANALFDE 440
+ KA+ L E
Sbjct: 507 GMIQKADELASE 518
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 15/271 (5%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC 236
GR ++LG R GF D + V++ LC+ G A + ++ + P
Sbjct: 196 GRGLELLGEVTRR----GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS--CAPTAITY 249
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ LI G+C G +DEA RL +M V Y ++ K+ R D + L +
Sbjct: 250 NSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQ--- 306
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
M N + +V TF L+ LC R EDA++L + GC P T+ ++
Sbjct: 307 ----MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDS 415
+A +V + +E++ +S G+ Y + C R +QA+ +++ ++G P S
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 422
Query: 416 -ETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
Y +++ C R D A ++E ++ G
Sbjct: 423 VAMYAIILDALCRDGRTDDAVQFYEEMIQRG 453
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P + T+ L+ L K RR DA+++ M P+ TT V+++SL RV + E
Sbjct: 36 PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARE 95
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+++ M G A Y + LC ER+++A+++ E M G P TY+ ++T +C
Sbjct: 96 LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFC 155
Query: 427 AHNRVDKANALFDEAVRNG 445
RVD+A+ ++ V G
Sbjct: 156 RARRVDEAHGFMEQMVAEG 174
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 115/275 (41%), Gaps = 12/275 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ +D L + R + + E M + G + ++ C A ++
Sbjct: 111 TYSALVDGLCKCERLDEAVALVETMA-ERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQ 169
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E PD LI G+C + L E+ R GF V Y+ ++D + K R
Sbjct: 170 MVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGR 229
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D + E + P + T+N LI C+ ++AI+L +M + C P
Sbjct: 230 LRDAVDIFEE---------MSCAPTAI-TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAP 279
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ L+ + + R+ + E+ +M + + + + LCG R+E A+ +
Sbjct: 280 DVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL 339
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
E++ G P TY+ ++ +C N+V KA L
Sbjct: 340 EEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELV 374
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 10/216 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P + +++I G C G+L A + R+M + Y ++ +SK R +D
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRD---- 57
Query: 291 DSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
A +VL +M VP N T V++ +LC R +DA +L M G N T+
Sbjct: 58 ---AVQVLQEMVSARHVPDNT-TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYS 113
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
L+ L + R+ E +++ M G A Y +T C R+++A E+M +
Sbjct: 114 ALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAE 173
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G +PD TY L+ +C V + L E R G
Sbjct: 174 GCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG 209
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 7/237 (2%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+V+ LC G +A + + + PD L+ G +L +A ++ +EM
Sbjct: 10 VVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSAR 69
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V LC R+D +A +++ +M + G+ N T++ L+ LCK
Sbjct: 70 HVPDNTTLTVV---VQSLCLGD---RVD-DARELVEEMLHRGMAANAITYSALVDGLCKC 122
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R ++A+ L M E GC P T+ +I +A RV E +++M + G Y
Sbjct: 123 ERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITY 182
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ C + + + + ++ G PD TY ++ C R+ A +F+E
Sbjct: 183 TALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 7/234 (2%)
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ G+ + AE+LV++ + + L+ GWC GKLDEAK + M V
Sbjct: 161 KTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVV 220
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+N +L R +D F L E ME G P N ++ L+ L R ++A+
Sbjct: 221 FNTLLAGFVADGRFEDAFELARE-------MERRGCPPNAVSYTTLMQGLGARGRVDEAM 273
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
++F M GC P+ T+ L+ + +A R+ +G E +D M G + Y F
Sbjct: 274 RVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAH 333
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
E++E+ + + E+M+ PD Y++++ C +A AL++E N
Sbjct: 334 EKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETN 387
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 7/231 (3%)
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
L + A E+ PD + + L+ G+ DG+ ++A LAREM R G V+Y ++ +
Sbjct: 206 LARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGA 265
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
R EA +V ++M G + T+ L++ CK R + M G
Sbjct: 266 RGRV-------DEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREG 318
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
+ +L + + ++ E E+++RM+ Y + C + +QA+
Sbjct: 319 LRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAV 378
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+++ +M+T+ +P +T+ +++T + +A F + V G+ V P+
Sbjct: 379 ALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQ 429
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 25/290 (8%)
Query: 175 RAGRPTQVL------GFFERMERDYGFKR-----------DKDSLRLVVEKLCENGYASY 217
R RPT V G+ + D GF+ D + +++ LC+ G
Sbjct: 254 RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313
Query: 218 AEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A KL + + + P+D LI G CV G+ D + ++M R G + + YN +
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL-- 371
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
++ LC+ D EA+K++++M G+ + T+ +LI CK E A+++ M
Sbjct: 372 -INGLCKVGDL----REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ G + F LI + +V E + + M AG Y + C +
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDV 486
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ + ++M+ DGH P TY++L+ C ++ AN L D + GV
Sbjct: 487 KTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 184/442 (41%), Gaps = 51/442 (11%)
Query: 39 NFLSKP------FSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPL-PISQRLHLIFS 91
NFLS P FS+ T DP I ++S E ++ P P+ L I
Sbjct: 11 NFLSSPRGGFLCFSTWMTPPTSHCHDP---ILTTIS----EAIKVSPTKPLHSSLKRILP 63
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFS---HTDETLSFFTDYFGRRKDFK 148
+TP + LN + ++L F WL+ +F H+ T++ F + +
Sbjct: 64 SLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQ 123
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQ-------VL-------GFFE------R 188
++ F+V K K AS + V R T VL G+F R
Sbjct: 124 SLLQFVVSRK----GKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR 179
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC--DLLIKGWCVD 246
+ R + + S + ++L + S A ++ + +P D +C ++L+ C +
Sbjct: 180 LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPD-VCKFNVLMHRLCKE 238
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
K++EA+ L E+ + G V++N +++ K FRL M N V
Sbjct: 239 HKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRF-------MMENRV 291
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T++VLI+ LCK + +DA KLF M + G PN+ TF LI R G E
Sbjct: 292 FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGME 351
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ +M G Y + LC + + +A + +M G PD TY +L+ C
Sbjct: 352 IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCC 411
Query: 427 AHNRVDKANALFDEAVRNGVEV 448
++ A + E V+ G+E+
Sbjct: 412 KEGDLESALEIRKEMVKEGIEL 433
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 133/302 (44%), Gaps = 9/302 (2%)
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-I 229
DRL++ + F+E + D G+ D +++ +LC+ + A+ L + +
Sbjct: 198 DRLMKLNLTSPAWAFYEEI-LDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P + LI G+C G LD+ RL R M Y+ + ++ LC++ +
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVL---INGLCKEG---Q 310
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
LD +A K+ L+M G+ N TF LI+ C R++ ++++ +M G P+ T+
Sbjct: 311 LD-DANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI L + + E +++ M G K Y + C +E A+ + ++M +
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
G D+ + L++ +C +V +A E + G++ Y + K VK G
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 470 KK 471
K
Sbjct: 490 FK 491
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 10/282 (3%)
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
F+++N+ T + I+ L + G+ F M D G + + ++ C
Sbjct: 285 FMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM-CDRGLVPNDVTFTTLINGHCVT 343
Query: 213 GYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G A ++ + + + PD + LI G C G L EAK+L EM + G + Y
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
++D C++ D L+S E + +M G+ + F LIS C+ + +A +
Sbjct: 404 TMLID---GCCKEGD---LESALE-IRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
M E G P++ T+ ++I + V G +++ M+ G+ G Y L LC
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH-NRVD 432
+++ A + + M G PD TY++L+ C H NR D
Sbjct: 517 KQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRED 558
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ID + G L + M ++ G + D + ++ C G AE+ +++
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKE-GIELDNVAFTALISGFCREGQVIEAERTLRE 460
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I PDD ++I G+C G + +L +EM G G V YN +L+ + K +
Sbjct: 461 MLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQ 520
Query: 284 KKDPFRLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKL 332
K+ +LLD N GV + T+N+L+ CK ED KL
Sbjct: 521 MKNA--------NMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL 562
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 149/396 (37%), Gaps = 69/396 (17%)
Query: 126 NFSHTDETLSFFTDYFGRR-----KDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPT 180
NF+ DE LS F + DF I + + K +L+ +D L G P+
Sbjct: 51 NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSL---GIPS 107
Query: 181 QV------LGFFERMER-DYGF-----------KRDKDSLRLVVEKLCENGYASYAEKLV 222
V + F + R D+GF + D + ++ LC G A L
Sbjct: 108 DVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLF 167
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
E F P+ LI G C G A RL R M + E + YN I+DC+ K
Sbjct: 168 DKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFK- 226
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R +EA + +M G+ NV T+N +I LCK + L M +
Sbjct: 227 ------DRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKI 280
Query: 342 HPNETTFLVLIKSL---------------------------YQAARVG--------EGDE 366
PN F L+ +L Y A G E D+
Sbjct: 281 MPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADK 340
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ D M G A Y + C I+RI++AM +FE+M P+ TY+ L+ C
Sbjct: 341 VFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLC 400
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
R+ A ALF E V +G YR+ YL K
Sbjct: 401 HVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCK 436
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 8/255 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+V+ LC+ G + A +V + PD L+ G C+ ++DEA ++ M R G
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
++Y+ +++ K+ R L E + L VP N+ T+N LI LC +
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQREL------VP-NIVTYNTLIHGLCHV 402
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R DAI LF+ M G P+ T+ +L+ L + + + M+ ++ + A + Y
Sbjct: 403 GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSY 462
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ +C + +E A +F + + G +PD TY +++ C + +A LF E
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522
Query: 444 NGVEVKPKEYRVDPR 458
+G Y + R
Sbjct: 523 DGCSPDDCTYNLITR 537
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 124/292 (42%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + + + L F M G + + ++ LC+ + L+ +
Sbjct: 216 TYNTIIDCLFKDRQVNEALNIFSEMIAK-GISPNVSTYNSIIHGLCKFSEWKHVATLMNE 274
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ +I P+ I L+ C +G + A + M + G E V Y ++D C
Sbjct: 275 MVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMD---GHCL 331
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + EA+KV M G NV +++ LI+ CKI+R + A+ LF M + P
Sbjct: 332 RSEM----DEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVP 387
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L R+ + + M ++G Y L LC ++QAM++
Sbjct: 388 NIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAML 447
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ ++ PD ++Y++++ C ++ A LF G+ Y +
Sbjct: 448 KAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTI 499
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 89/235 (37%), Gaps = 44/235 (18%)
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF 230
D +VR G V+ + + +R ++ L E++C+ E+
Sbjct: 343 DTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLF-EEMCQR---------------ELV 386
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ + LI G C G+L +A L EM G V Y +LD + K +
Sbjct: 387 PNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM 446
Query: 291 -----------DSEAEKVLLD-----------------MEYNGVPRNVETFNVLISNLCK 322
D ++ +++D + G+ +V T+ ++I+ LC
Sbjct: 447 LKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCL 506
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+A KLF M GC P++ T+ ++ + + +++ M G++
Sbjct: 507 QGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFS 561
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 136/334 (40%), Gaps = 30/334 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L R R ++ + +RM G + D + +VV LC+ G A L+K
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+I P I + +I C +++A L EM G V YN ++ C+ R
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 284 KKDPFRLDS----------------------------EAEKVLLDMEYNGVPRNVETFNV 315
D RL S EAEK+ +M + ++ T++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI+ C R ++A +F M C PN T+ LIK +A RV EG E+ M G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + + A VF++M +DG PD TY +L+ C + +V+ A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+F+ R+ +E Y + + K V+ G
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 9/287 (3%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
G + ID L L F M+ + G + + + ++ LC G S A +L
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 222 VKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ D +I P+ LI + +GKL EA++L EM + + Y+ + ++
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL---ING 370
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
C RLD L + + P NV T+N LI CK +R ++ ++LF M + G
Sbjct: 371 FCMHD---RLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
N T+ LI +QA + +M S G Y L LC ++E A+
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
VFE ++ PD TY++++ C +V+ LF GV+
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 146/336 (43%), Gaps = 38/336 (11%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDY---------------------FGRRKDFKAIH 151
++ +N + N+ + ++ L+ FT+ +GR D +
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD----SLRLVVE 207
+++ K T ++ ID V+ G+ + ++ M KR D + ++
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-----IKRSIDPDIFTYSSLIN 369
Query: 208 KLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
C + A+ + + + + FP+ + LIKG+C ++DE L REM + G
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
TV Y ++ + R+ D A+ V M +GV ++ T+++L+ LC +
Sbjct: 430 NTVTYTTLIHGFFQ-ARECD------NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E A+ +F + P+ T+ ++I+ + +A +V +G ++ + G Y
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ C E+A ++F +MK +G PDS TY+ L+
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K D L +M G Y+ +++C CR+ S A VL M G
Sbjct: 96 KFDLVISLGEQMQNLGISHNLYTYSILINC---FCRRSQL----SLALAVLAKMMKLGYE 148
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ T N L++ C R DA+ L +M E G P+ TF LI L++ R E +
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+DRM G Y + LC I+ A+S+ +KM+ P Y+ ++ C
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 428 HNRVDKANALFDEAVRNGV 446
+ V+ A LF E G+
Sbjct: 269 YKNVNDALNLFTEMDNKGI 287
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI +C +L A + +M + G+E V N +L+ R D L +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ---- 176
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+++M Y P + TFN LI L + R+ +A+ L RM GC P+ T+ +++ L +
Sbjct: 177 MVEMGYQ--PDSF-TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ ++ +M+ G Y + LC + + A+++F +M G P+ T
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 418 YDLLMTKWCAHNRVDKANALFDEAV 442
Y+ L+ C + R A+ L + +
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMI 318
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 143/354 (40%), Gaps = 30/354 (8%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFT-DYFGRRKDFKAI-----HDFLVDNKEVLGPKT 165
R++LG T +FSH SF+ D+ G R D++ I +D +D+ L
Sbjct: 17 RSLLGKGKCGTAPPSFSHC----SFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDM 72
Query: 166 LAS-----------CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY 214
+ S + + + + V+ E+M+ + G + + +++ C
Sbjct: 73 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSILINCFCRRSQ 131
Query: 215 ASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
S A ++ + PD + L+ G+C ++ +A L +M G++ + +N
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
++ + + R SEA ++ M G ++ T+ ++++ LCK + A+ L
Sbjct: 192 LIHGLFRHNRA-------SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
+M + P + +I +L V + + M + G Y + LC
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
R A + M NP+ T+ L+ + ++ +A L+DE ++ ++
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL 239
T + GFF+ R+ D+ ++V +++ +G + PD +L
Sbjct: 436 TLIHGFFQ--------ARECDNAQIVFKQMVSDG---------------VLPDIMTYSIL 472
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ G C +GK++ A + + R E YN +++ + K + +D + L
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL-------FC 525
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+ GV NV T+ ++S C+ E+A LF M E G P+ T+ LI++ +
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
E+I M+S + +G +T + R++++
Sbjct: 586 DKAASAELIREMRSCRF-VGDASTIGLVTNMLHDGRLDKS 624
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 140/337 (41%), Gaps = 14/337 (4%)
Query: 132 ETLSFFTDYFG--RRKDF-KAIHDFLVDNKEVLGPKTL--ASCIDRLVRAGRPTQVLGFF 186
+T ++ + G R+ D A+ F KE P T+ ++ I+ L +GR +
Sbjct: 249 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI 308
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
M +G + + LC+ G A +L D N+ P+ LI G CV
Sbjct: 309 REMIL-HGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G L A L M R G TV YN +++ + + R K F VL M NG
Sbjct: 368 SGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF-------VVLNLMGRNG 420
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
N+ T+N +I C + + A+ + M + G N T+ +IK +
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++D M+ G + Y E + C I ++E A +F +M DG P+ TY L+ +
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
C ++D A +L + R+G + Y V L K
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 32/331 (9%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
D L + +G ++ + L R G V+ + RM + G + + V+ LC+
Sbjct: 169 DMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-GVQPNLLIYNAVINALCK 227
Query: 212 NGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+G + AE ++K +E+ PD +I G C LD A ++ +M + G E TV
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 271 YNCILDCVSKLCRKKDPFRLDSE----------------------------AEKVLLDME 302
Y+ +++ + R + F L E A ++ +DM+
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G NV T+ LIS LC + AI LF+RM G PN T+ LI L + R+
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+++ M G + Y E + C + ++AM V M GH+ + TY+ ++
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+C A + D +R+G KP E+
Sbjct: 468 KGYCDSGNTTSALRILD-LMRDG-GCKPDEW 496
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
+G T L + M RD G K D+ S ++ C+ A L + ++ + P++
Sbjct: 473 SGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
LI G+C D KLD A L M R G YN ++ ++K ++ F E
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK----QNNFSGAEEL 587
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
KV+++ G+ NV T+ +I LCK + A+++F +M E GC PN T+ LI++
Sbjct: 588 CKVMIE---EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L Q +V E + + ++ G + Y + + ++E A + +M G P
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704
Query: 415 SETYDLLM 422
TY +L+
Sbjct: 705 LWTYGVLI 712
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 26/300 (8%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
+ A+ + LV+N+ + K ++ + R G ++ + E M + Y D LV+
Sbjct: 393 YNALINILVENRRI---KYAFVVLNLMGRNGCSPNIVTYNE-MIKGYCILGDPKKAMLVM 448
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ + G+++ LV T N I IKG+C G A R+ M GG +
Sbjct: 449 NNMLQRGHSA---NLV--TYNTI----------IKGYCDSGNTTSALRILDLMRDGGCKP 493
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+Y ++ K+ + + F L +E M +G+ N T+ LI CK +
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNE-------MVDDGLCPNEVTYTALIDGYCKDEKL 546
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+ A L M GC PN T+ VLI L + +E+ M G Y
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LC A+ +F KM G P+ TY L+ +V++A LF E R+G+
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 205 VVEKLCENGYASYAEK---LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ C++G + A + L++D + PD+ LI G+C K++ A L EM
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCK--PDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G V Y ++D C+ + +LD+ A +L M+ +G NV+T+NVLI L
Sbjct: 524 DGLCPNEVTYTALID---GYCKDE---KLDT-ATSLLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K A +L M E G PN T+ +I L + EM ++M G +
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG-CLPNL 635
Query: 382 DYYEFLTRLCGIE-RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L R G E ++E+A ++F +++ G PD TY ++ + +V+ A
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 441 AVRNGVEVKPKEYRVDPRYLKK 462
++ G + Y V + LK
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKN 717
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 118/326 (36%), Gaps = 33/326 (10%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VD+ T + ID + + E M+R G + + + +++ L +
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS-GCRPNVQTYNVLIHGLTKQN 579
Query: 214 YASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
S AE+L K E IFP+ +I G C +G + LA EM+ E G +
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG----STSLALEMFNKMIEQGCLPN- 634
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
L S L R EAE + ++E +G+ + T+ +I + E A
Sbjct: 635 --LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692
Query: 333 FYRMGEWGCHPNETTFLVLIKSL------------------------YQAARVGEGDEMI 368
RM + GC P T+ VLIK L YQ M
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMS 752
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
++ + + ++ L R +A + M + G PD E Y+ L+
Sbjct: 753 AKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 812
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYR 454
VD A +F G EV Y+
Sbjct: 813 RNVDLAMGVFKHMSTQGCEVHLNGYK 838
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 299 LDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
LDM +G+ + ++ L+ +L ++ + + ++RM G PN + +I +L +
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
V + + ++ ++ + + Y + C ++ A+ VF +M +G P++ T
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y L+ C RV++A L E + +G+
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGI 316
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 121/322 (37%), Gaps = 36/322 (11%)
Query: 119 HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGR 178
H LT+ NFS +E + + I +V T + ID L + G
Sbjct: 573 HGLTKQNNFSGAEELCKVMIE--------EGIFPNVV---------TYTAMIDGLCKNGS 615
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICD 237
+ L F +M + G + + ++ L + G AE L + + + PD+
Sbjct: 616 TSLALEMFNKM-IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV--------SKLCRKKDPF- 288
+I+ + + GK++ A M + G + Y ++ + +L D
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVP 734
Query: 289 -------RLDSEAEKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
D +A V+ P +V+ N L+SNL R +A +L M G
Sbjct: 735 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 794
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P++ + L+ SL + V + M + G + Y E + LC + R ++A
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEAR 854
Query: 401 SVFEKMKTDGHNPDSETYDLLM 422
FE M NPD +L+
Sbjct: 855 ITFENMLMRTWNPDDVVQAVLI 876
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 32/260 (12%)
Query: 205 VVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+NG S A E K P+ LI+ +GK++EA+ L E+ R G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL--- 320
+ Y +++ + + F L M G + T+ VLI L
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNF-------LGRMIKAGCQPTLWTYGVLIKGLKNE 718
Query: 321 -----------------CKI---RRSEDAIKLF-YRMGEWGCHPNETTFLVLIKSLYQAA 359
C +DA+ + ++ E + L+ +L A
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R E +E++ M S G ++ Y L L + ++ AM VF+ M T G Y
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838
Query: 420 LLMTKWCAHNRVDKANALFD 439
L+ C +R +A F+
Sbjct: 839 ELICALCQLHRRKEARITFE 858
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 125/264 (47%), Gaps = 7/264 (2%)
Query: 186 FERMERD--YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKG 242
FE +R YG+K S + ++ L + ++ E + K+ +I P+ +++I
Sbjct: 173 FEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINA 232
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
C GK+++A+ + +M G V+YN ++D KL ++ D+ VL +M
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADA----VLKEMV 288
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
N V N+ TFN+LI K ++K+F M + PN ++ LI L ++
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E M D+M SAG Y + C + +++A+ +F +K G P + Y++L+
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 423 TKWCAHNRVDKANALFDEAVRNGV 446
+C ++D AL +E R G+
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGI 432
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 144/331 (43%), Gaps = 22/331 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE---NGYASYAEKL 221
T I+ L + G+ + E M + YG + S +++ C+ NG A+ +
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDM-KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 222 VKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+K+ N++ P+ ++LI G+ D L + ++ +EM + ++YN + ++
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL---ING 340
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC SEA + M GV N+ T+N LI+ CK ++A+ +F + G
Sbjct: 341 LCNGGKI----SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P + +LI + + ++ +G + + M+ G Y + LC IE A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
+F+++ + G PD T+ +LM +C KA L E + G++ PR+L
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK---------PRHL 506
Query: 461 KKPIAVKKGKKRETLPEKMARKRRRLKQIRL 491
I +K K L + + K+ RL
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 7/182 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID + G+ E MER+ G D + ++ LC NG A+KL ++
Sbjct: 408 IDAYCKLGKIDDGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD +L++G+C G+ +A L +EM + G + + YN ++ K K
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ ++ EK + NV ++NVL+ + + EDA L M E G PN T+
Sbjct: 527 MRTQMEK------ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580
Query: 350 VL 351
++
Sbjct: 581 IV 582
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 9/284 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFE-RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
++ S ++ +++ G + L F+E + + S LV++ +C+ G A ++
Sbjct: 152 RSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVF 211
Query: 223 KDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
++ A + PD L+ G C + ++DEA L EM G +V +N +++ L
Sbjct: 212 REMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLIN---GL 268
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C+K D R+ K++ +M G N T+N +I+ LC + + A+ L RM C
Sbjct: 269 CKKGDMVRVT----KLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC 324
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN+ T+ LI L + R +G ++ ++ G+ + Y ++ L E+ E+AM
Sbjct: 325 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 384
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+++KM G P+ Y L+ C ++D+A + E V G
Sbjct: 385 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L + R + + + M+ + F + +++ LC+ G KLV +
Sbjct: 225 TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSV-TFNVLINGLCKKGDMVRVTKLVDN 283
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P++ + +I G C+ GKLD+A L M V Y +++ + K R
Sbjct: 284 MFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGR 343
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D L L +E G N ++ LIS L K +SE+A+ L+ +M E GC P
Sbjct: 344 SVDGVHL-------LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQP 396
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N + LI L + ++ E E++ M + G Y + ++A+ V+
Sbjct: 397 NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVW 456
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++M + P+ Y +L+ C ++ +A ++ + G+
Sbjct: 457 KEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 499
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G + K +EA L ++M G + V Y+ ++D LCR+ +LD EA+++L
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALID---GLCREG---KLD-EAKEIL 421
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G N T++ LI K S+ AI+++ M + C PNE + VLI L +
Sbjct: 422 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 481
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM--KTDGHNPDSE 416
++ E M M G Y + LC +E + +F +M + PD
Sbjct: 482 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 541
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY++L+ C N + A L + + G
Sbjct: 542 TYNILLRALCKQNSISHAIDLLNSMLDRG 570
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 146/351 (41%), Gaps = 29/351 (8%)
Query: 88 LIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
++ S P + +N + GR++ G H L+ H ++ T G K+
Sbjct: 319 MVASKCVPNDVTYGTLINGLVKQGRSVDGV-HLLSSLEERGHHANEYAYSTLISGLFKEE 377
Query: 148 KAIHDFLVDNKEV---LGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
K+ + K V P + ++ ID L R G+ + M + G + +
Sbjct: 378 KSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM-VNKGCTPNAFTY 436
Query: 203 RLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ + G + A ++ K+ A N P++ +LI G C DGKL EA + M
Sbjct: 437 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 496
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G VAY+ ++ + + +L +E +L E + P +V T+N+L+ LC
Sbjct: 497 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE----MLCQESDSQP-DVVTYNILLRALC 551
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR-VGEGDEMIDRMKSAGYAIGK 380
K AI L M + GC+P+ T + + +L + +G E +D
Sbjct: 552 KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD----------- 600
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
E + RL +RI A + E M P++ T++ ++ + C +V
Sbjct: 601 ----ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 647
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 145/343 (42%), Gaps = 30/343 (8%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ K+ HD ++ L + + I+ L + G L +++E D
Sbjct: 143 GKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL-VNTDVVM 201
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++ S A +L + + I PD + LI G+CV G+L EA L EM
Sbjct: 202 YNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMV 261
Query: 261 RGGFELGTVAYNCILDCVSK---LCRKK----------------------DPFRLDSEAE 295
++ ++D + K + R K D + L +E
Sbjct: 262 LKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVN 321
Query: 296 K---VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
K V M GV + ++N++I+ L KI+ ++A+ LF M G P+ T+ LI
Sbjct: 322 KAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLI 381
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L + R+ +++D M + G Y + LC I++A+++ +K+K G
Sbjct: 382 DGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQ 441
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P TY++L+ C R+ A +F + + G V Y +
Sbjct: 442 PSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNI 484
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 44/318 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I G+ + G F M D + ++V+ LC++G + A+ ++
Sbjct: 236 TFNSLILGFCVVGQLKEAFGLFHEMVLK-NINPDVYTFSILVDALCKDGNITRAKNMLAV 294
Query: 225 TANE-IFPDDKICDLLIKGWC------------------------------VDG-----K 248
+ + PD L+ G+C ++G
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+DEA L +EM G TV YN ++D + KL R ++L E M NG+P
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDE-------MHNNGIPA 407
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++ T+N LI LCK + AI L ++ + G P+ T+ +LI L + R+ ++
Sbjct: 408 DILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVF 467
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ GY++ Y + LC +A + KM+ +G PD+ TY+ ++
Sbjct: 468 QDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRK 527
Query: 429 NRVDKANALFDEAVRNGV 446
+ +KA L E + G+
Sbjct: 528 DENEKAEKLLREMIIRGL 545
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 165/404 (40%), Gaps = 31/404 (7%)
Query: 95 PTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDE---------TLSFFTDYFGRRK 145
PTPS+V+ F+ G + N+ T + SH E T + + +
Sbjct: 53 PTPSIVE----FNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLG 108
Query: 146 DFK-AIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
+ A F K P T+ + I+ + G+ + L F + + GF D+ S
Sbjct: 109 EMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIA-LGFHLDQVSY 167
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYR 261
R ++ LC+ G A +++K ++ D + +++I C D + +A +L EM
Sbjct: 168 RTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMIT 227
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
V +N ++ + + K+ F L E M + +V TF++L+ LC
Sbjct: 228 KRISPDVVTFNSLILGFCVVGQLKEAFGLFHE-------MVLKNINPDVYTFSILVDALC 280
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K A + M + G P+ T+ L+ V + + M G A
Sbjct: 281 KDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAH 340
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + L I+ +++A+S+F++M G PD+ TY+ L+ C R+ A L DE
Sbjct: 341 SYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM 400
Query: 442 VRNGVEVKPKEYR--VDP----RYLKKPIAVKKGKKRETLPEKM 479
NG+ Y +D ++ K IA+ K K + + M
Sbjct: 401 HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSM 444
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 9/212 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ L + + L F+ M G D + +++ LC+ G SYA +LV + N
Sbjct: 346 INGLGKIKMVDEALSLFKEMCCK-GIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P D + + LI C + +D+A L +++ G + YN ++D + K R K+
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKN-- 462
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A+ V D+ G N T+N++I+ LCK +A L +M G P+ T+
Sbjct: 463 -----AQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTY 517
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+I++L++ + ++++ M G + K
Sbjct: 518 ETIIRALFRKDENEKAEKLLREMIIRGLLLCK 549
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 136/300 (45%), Gaps = 14/300 (4%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
N+ GP C ++G+ + +ME + K D ++++ LC++G
Sbjct: 211 NEVTYGPVLKVMC-----KSGQTALAMELLRKME-ERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 217 YAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A L + + F D I LI+G+C G+ D+ +L R+M + VA++ ++
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
DC K + + EAE++ +M G+ + T+ LI CK + + A +
Sbjct: 325 DCFVKEGKLR-------EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M GC PN TF +LI +A + +G E+ +M G Y + C + +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+E A +F++M + PD +Y +L+ C + +KA +F++ ++ +E+ Y +
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 126/287 (43%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G F ME GFK D ++ C G KL++D +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIK-GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI + +GKL EA+ L +EM + G TV Y ++D C++
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID---GFCKEN--- 366
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+LD +A +L M G N+ TFN+LI+ CK +D ++LF +M G + T+
Sbjct: 367 QLD-KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI+ + ++ E+ M S Y L LC E+A+ +FEK++
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D Y++++ C ++VD A LF GV+ K Y +
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++I C KL A ++ + G+E TV ++ + ++ LC + SEA ++
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL---INGLCLEGRV----SEALEL 164
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ M G + T N L++ LC + DA+ L RM E G PNE T+ ++K + +
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ + E++ +M+ + Y + LC ++ A ++F +M+ G D
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVR 443
Y L+ +C R D L + ++
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIK 310
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ N+ T +++I+ C+ R+ A ++ + G P+ TF LI L R
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E E++DRM G+ + LC ++ A+ + ++M G P+ TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ C + A L + +++ +Y +
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 104/266 (39%), Gaps = 21/266 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
+D L G P + L FE++E+ + D +++ +C A L
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSK-MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC---------VS 279
+ PD K +++I G C G L EA L R+M G YN ++ +
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 280 KLCR--KKDPFRLDSE----AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE--DAIK 331
KL K+ F +D+ A L M G +V TF L+ C + DA
Sbjct: 583 KLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPT 642
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
LF M G PN T+ +IK L + + ++D+M G F++ LC
Sbjct: 643 LFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC 702
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSET 417
+ A+ + KM+ D N D T
Sbjct: 703 KQDLHGSAILLLRKMEND--NEDVTT 726
>gi|115489040|ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa Japonica Group]
Length = 682
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 15/227 (6%)
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
++K + + + + D +K G +D+A+ + +EM GF V +N ++ SK
Sbjct: 411 VLKGLLSSVMSYNMVIDCFVKA----GAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSK 466
Query: 281 LCRKKDPFRLDSEAEKVLLDM--EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L + KV+L M E+ +P ++ TF LI LC + +DA F M E
Sbjct: 467 LGNVHNA--------KVVLKMLMEHGFMP-DIITFTSLIDGLCNTHQLDDAFVCFEEMAE 517
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
WG PN T+ VL+ +L A V + +++++MK G + + C + ++++
Sbjct: 518 WGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDK 577
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A +F M G PDS TY+ L+ C RV+KA + R+G
Sbjct: 578 AEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSG 624
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 26/313 (8%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R K ++ + D+L ++ L P + + L + + + F +RM G+ D +
Sbjct: 295 RDKAYRMLSDWL-GHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSAR-GYLLDSTAF 352
Query: 203 RLV---------VEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
+V V LCE + +K+ N P + ++IK +A
Sbjct: 353 GIVMSCALKCLEVSDLCE-----LLDSFIKNGGN---PGFDVYIMVIKSLLNCKNFSKAN 404
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
M G ++YN ++DC K +AE+++ +M+ G N+ TF
Sbjct: 405 HYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV-------DKAEEIVKEMQDKGFLPNLVTF 457
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LIS K+ +A + + E G P+ TF LI L ++ + + M
Sbjct: 458 NTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE 517
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G + Y + LC + +A+ + KMK DG PD+ +++ L+ +C +VDK
Sbjct: 518 WGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDK 577
Query: 434 ANALFDEAVRNGV 446
A +F++ VR GV
Sbjct: 578 AEDIFNDMVRFGV 590
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID V+AG + + M+ D GF + + ++ + G A+ ++K
Sbjct: 426 IDCFVKAGAVDKAEEIVKEMQ-DKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHG 484
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PD LI G C +LD+A EM G YN ++ LC
Sbjct: 485 FMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMH---TLCSAGHV- 540
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++A +L M+ +GV + +FN LI + C++R+ + A +F M +G P+ T+
Sbjct: 541 ---NKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTY 597
Query: 349 LVLIKSLYQAARVGEGDEMI-DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
LIK+L RV + E++ R +S + Y+ + L + + +A + +K
Sbjct: 598 NSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDK 655
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 27/272 (9%)
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDT---ANEIFPDDKICDLLIKGWCVDGKLDE 251
F RD R +V L G + +LV + E+ ++ +C L ++ W G
Sbjct: 114 FARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEV-SEELVCAL-VESWGRLGLARY 171
Query: 252 AKRLAREMYRGGFELGTVAYNCIL------------------DCVSKLCRKKDPFRLDSE 293
A + +M R G T Y L V +CR+ + E
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRG----IVDE 227
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A +++ ME G+ NV T+ +L+ C R E+A ++ +M E G P+E T+ L+
Sbjct: 228 AVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 287
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+++ + M+ ++ + L L + ++A+ ++M G+
Sbjct: 288 GVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLL 347
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
DS + ++M+ V L D ++NG
Sbjct: 348 DSTAFGIVMSCALKCLEVSDLCELLDSFIKNG 379
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 119/334 (35%), Gaps = 65/334 (19%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWC 244
F++M D G + D + +V +C G A +LV+ E I P+ +L+ G+C
Sbjct: 197 FQQMPAD-GCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFC 255
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-------------- 290
G+++EA R+ +M G Y ++ V + + +R+
Sbjct: 256 NAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPS 315
Query: 291 ------------DSEAEKVLLD--MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
D E V + M G + F +++S K D +L
Sbjct: 316 ACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSF 375
Query: 337 GEWGCHPNETTFLVLIKSL-----------------------------------YQAARV 361
+ G +P ++++IKSL +A V
Sbjct: 376 IKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV 435
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ +E++ M+ G+ + ++ + + A V + + G PD T+ L
Sbjct: 436 DKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSL 495
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ C +++D A F+E GV + Y V
Sbjct: 496 IDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNV 529
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 120/277 (43%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
I A R + L F +M D + + + +++ LC+ G + A + K+ T
Sbjct: 281 IHGFCEARRVDEALKLFSQMHEDNCWPTVR-TYTVIIFALCQLGRKTEALNMFKEMTEKH 339
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +LI C D D+AK++ M G V YN ++D C+K
Sbjct: 340 CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALID---GYCKKG--- 393
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L + A ++L ME N N T+N LI C+ + A+ L ++M E PN T+
Sbjct: 394 -LSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTY 452
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI + +G +++ M +G + Y F+ LC +E+A S+FE +K
Sbjct: 453 NILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKE 512
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G + Y L+ +C +V L D+ + G
Sbjct: 513 KGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 8/242 (3%)
Query: 205 VVEKLCENGY-ASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G AS E L +N P+ + + LI G+C + +A L +M
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V YN + + C++ D A K+L M +G+ + T++V I LCK
Sbjct: 445 LQPNVVTYNIL---IHGQCKEGDL----GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKR 497
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
E+A LF + E G NE + LI + +V +G ++D+M SAG Y
Sbjct: 498 GLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITY 557
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C + ++A + + M P ++TY +L+ + D+A+ +FD+ +
Sbjct: 558 NSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLS 617
Query: 444 NG 445
G
Sbjct: 618 TG 619
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 8/256 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREM 259
+L +V C+ G AE V D LI G+C + +D A + M
Sbjct: 206 TLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSM 265
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G V+Y + + C + R+D EA K+ M + V T+ V+I
Sbjct: 266 PNKGCLRNEVSYT---NLIHGFCEAR---RVD-EALKLFSQMHEDNCWPTVRTYTVIIFA 318
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LC++ R +A+ +F M E C PN T+ VLI SL + + + ++++ M G
Sbjct: 319 LCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPS 378
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + C A+ + M+++ +P++ TY+ L+ +C + KA +L
Sbjct: 379 VVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLH 438
Query: 440 EAVRNGVEVKPKEYRV 455
+ + ++ Y +
Sbjct: 439 KMLERKLQPNVVTYNI 454
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 7/216 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ ++LI G C +G L A +L M G Y+ +D LC++ L
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFID---TLCKRG----L 499
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA + ++ G+ N ++ LI CK+ + D L +M GC PN T+
Sbjct: 500 VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI + E ++D M Y + L + +QA +F++M + G
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+PD Y + +C+H R+ A L + G+
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGI 655
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 16/234 (6%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G D+ + + ++ LC+ G A L + + I ++ I LI G+C GK+ +
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE- 311
+ L +M G ++ YN ++D C++K+ + ++L+D+ + R++E
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLID---GYCKEKN-----FKEARLLVDIM---IKRDIEP 587
Query: 312 ---TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
T+ +LI NL K + A +F +M G HP+ + I + R+ + + +I
Sbjct: 588 AADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLI 647
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+M + G Y F+ I+ A + ++M G P TY L+
Sbjct: 648 CKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLI 701
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 118/310 (38%), Gaps = 66/310 (21%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL----VKDT---ANEIFP 231
P L FF + + +GFK + S ++ L NGY AE + +K T N +F
Sbjct: 90 PQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFV 149
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
L+ + + R + F+L YN +L +S+ F +
Sbjct: 150 -----------------LEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSR-------FLMI 185
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKI---------------------------- 323
E + V L+M + V N+ T N +++ CK+
Sbjct: 186 DEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSL 245
Query: 324 -------RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ + A +F M GC NE ++ LI +A RV E ++ +M
Sbjct: 246 ILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNC 305
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + LC + R +A+++F++M P+ TY +L+ C + D A
Sbjct: 306 WPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKK 365
Query: 437 LFDEAVRNGV 446
+ + + G+
Sbjct: 366 ILNGMLEKGL 375
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 134/352 (38%), Gaps = 33/352 (9%)
Query: 133 TLSFFTDYFGRRKDFKA---IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + D + + K+FK + D ++ T ID L++ Q F++M
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGK 248
G D + C +G AE L+ K A I PD + L I + G
Sbjct: 616 -LSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGS 674
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK----------------DPF---- 288
+D A + + M+ G E Y+C++ +S K+ + F
Sbjct: 675 IDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCW 734
Query: 289 -RLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R+D E L M +G N T+ I+ LCK+ E A +LF M E G PNE
Sbjct: 735 RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNED 794
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVF 403
+ L+ Q GE +D M + + D + L LCG+ E+A VF
Sbjct: 795 IYNSLLGCSCQLGLYGEAIRWLDIMIENRH-LPHLDSCKLL--LCGLYDEGNDEKAKRVF 851
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+N D + +L+ DK + LF G ++ PK Y +
Sbjct: 852 CSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSM 903
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 114/306 (37%), Gaps = 38/306 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
ID L + G + FE + ++ G K ++ +++ C+ G S L+ K +
Sbjct: 491 IDTLCKRGLVEEARSLFESL-KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK---LCRKK 285
P+ + LI G+C + EA+ L M + E Y ++D + K +
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609
Query: 286 DPF--------------------------RLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
D F RL +AE ++ M G+ + + + I
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYCSHGRL-KDAEVLICKMNAKGIMPDTMLYTLFIDA 668
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+ + A + RM E GC P+ T+ LIK L A S+G A
Sbjct: 669 YGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVA-- 726
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
D+ R+ E + +F KM G P++ TY +T C ++ A+ LFD
Sbjct: 727 SNDFSNCWRRV----DYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFD 782
Query: 440 EAVRNG 445
G
Sbjct: 783 HMKEKG 788
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 11/289 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T S I + +G+ Q F+ M ++ K D + ++V+ LC+ G A + K
Sbjct: 281 TYNSLIYGMCNSGQWKQASILFKEM-LEWNMKPDVVTFSILVDALCKEGVVLEALSVFGK 339
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD LI G C E+ L EM V ++ +D C+
Sbjct: 340 MIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDV---FCK 396
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K + SEA+ ++ M G+ NV T+N L+ C + ++A K+F M GC P
Sbjct: 397 KG----MVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAP 452
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ +LIK ++ R+ E ++ D M G + ++ LC R A +F
Sbjct: 453 DVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELF 512
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+KM + G PD TY L++ +C H +D+A ALF EA++ ++KP
Sbjct: 513 KKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF-EALKKS-QLKPNH 559
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 13/279 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L + G + L F +M + + D + ++ +C++ + L+ +
Sbjct: 316 TFSILVDALCKEGVVLEALSVFGKMIQ-IAMEPDIVTYSSLIHGVCKSSLWKESSTLLNE 374
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKL 281
+ I PD + + +C G + EA+ + M G V YN ++D C+
Sbjct: 375 MLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHS- 433
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
++D EA KV M G +V ++N+LI CK R ++A +LF M G
Sbjct: 434 -------QMD-EARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGL 485
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T LI L QA R E+ +M S G Y L+ C +++A++
Sbjct: 486 TPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALA 545
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+FE +K P+ +L+ C +++ A LF
Sbjct: 546 LFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSS 584
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 156/422 (36%), Gaps = 82/422 (19%)
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIH 151
H+ P P + Q FN L H D +S + R+ +F +
Sbjct: 97 HMNPFPCITQ---------------FNQLLAALVRMKHYDSVVSIY-----RKMEFFGV- 135
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ V L +C+ L G VLG ++ GFK + ++ LC
Sbjct: 136 -----SCSVYTLTILINCLCHLHLVGLGFSVLGKIFKL----GFKPSIITFNTLINGLCI 186
Query: 212 NGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
G A E+L + P +++ G C GK A ++M E V+
Sbjct: 187 EGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVS 246
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y+ I+D LC+ RL +EA + M G+ V T+N LI +C + + A
Sbjct: 247 YSIIID---SLCKN----RLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQAS 299
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM------------KSAGYAI 378
LF M EW P+ TF +L+ +L + V E + +M S + +
Sbjct: 300 ILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGV 359
Query: 379 GKKDYY--------EFLTR---------------LCGIERIEQAMSVFEKMKTDGHNPDS 415
K + E L+R C + +A S+ M G P+
Sbjct: 360 CKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNV 419
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
TY+ LM +C H+++D+A +FD V G P L I +K K E +
Sbjct: 420 VTYNSLMDGYCLHSQMDEARKVFDIMVNKGCA---------PDVLSYNILIKGYCKSERI 470
Query: 476 PE 477
E
Sbjct: 471 DE 472
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 212 NGYASYAEKLVKDTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+GY +++ D A ++F PD ++LIKG+C ++DEAK+L EM
Sbjct: 427 DGYCLHSQM---DEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G ++ + + +S LC+ P+ A+++ M +G P ++ T++ L+S CK
Sbjct: 484 GLTPNSITHTTL---ISGLCQAGRPY----AAKELFKKMGSHGCPPDLITYSTLLSGFCK 536
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
++A+ LF + + PN +L+ + +A ++ + E+ +
Sbjct: 537 HGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 36/303 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D + + + R+E G + D +L +++ C G ++ ++
Sbjct: 66 LDSFAKMKHYSTAVSLSHRLELK-GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL------- 281
+P D + + LIKG C+ G++ +A ++ GF+L V+Y +++ V K+
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAI 184
Query: 282 --CRKKD-------------------PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
RK D ++L SEA + +M G+ +V T+N LI
Sbjct: 185 KFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGF 244
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C + + ++AI L M +PN T+ +L+ +L + +V E ++ M A K
Sbjct: 245 CIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV---K 301
Query: 381 KDYYEFLTRLCG---IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
D + T + G + +++A VF M G PD TY +L+ +C + VD+A L
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 438 FDE 440
F E
Sbjct: 362 FKE 364
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 140/343 (40%), Gaps = 30/343 (8%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ K HD L+ L + A+ I+ + + G + F +++ K D
Sbjct: 143 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLT-KPDVVM 201
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
+++ +C+ S A L + A + D + + LI G+C+ GKL EA L EM
Sbjct: 202 YNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMV 261
Query: 261 RGGFELGTVAYNCILDCVSK----------------LCRKKDPFRLDS------------ 292
YN ++D + K C K D +
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A+ V M GV +V T+ +LI+ CK + ++A+ LF M + P T+ LI
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L ++ R+ ++ID M+ G Y + LC +++A+++F KMK
Sbjct: 382 DGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIR 441
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+ T+ +L+ C R+ A +F + + G + Y V
Sbjct: 442 PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 7/218 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +LI G+C + +DEA L +EM++ G V Y+ ++D + K R +
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L E M G P +V T++ LI LCK + AI LF +M + PN TF
Sbjct: 395 DLIDE-------MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ L + R+ + E+ + + GY + Y + C +E+A+++ KM+
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+G P++ T++ ++ + DKA L + + G+
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
FK +H V G T +S ID L ++GR + V + M RD G D + ++
Sbjct: 362 FKEMHQ----KNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM-RDRGQPADVITYSSLI 416
Query: 207 EKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LC+NG+ A L + EI P+ +L+ G C G+L +A+ + +++ G+
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
L YN + ++ C++ L EA +L ME NG N TF +I L K
Sbjct: 477 LNVYTYNVM---INGHCKQG----LLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529
Query: 326 SEDAIKLFYRMGEWG 340
++ A KL +M G
Sbjct: 530 NDKAEKLLRQMIARG 544
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 74/186 (39%), Gaps = 7/186 (3%)
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ +N ILD +K+ L +E G+ ++ T N+LI+ C + +
Sbjct: 60 IQFNKILDSFAKMKHYSTAVSLSHR-------LELKGIQPDLITLNILINCFCHMGQITF 112
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+ ++ + G P+ T LIK L +V + D++ + G+ + + Y +
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+C I A+ K+ PD Y+ ++ C + V +A LF E G+
Sbjct: 173 GVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISA 232
Query: 449 KPKEYR 454
Y
Sbjct: 233 DVVTYN 238
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 140/337 (41%), Gaps = 14/337 (4%)
Query: 132 ETLSFFTDYFG--RRKDF-KAIHDFLVDNKEVLGPKTL--ASCIDRLVRAGRPTQVLGFF 186
+T ++ + G R+ D A+ F KE P T+ ++ I+ L +GR +
Sbjct: 249 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI 308
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
M +G + + LC+ G A +L D N+ P+ LI G CV
Sbjct: 309 REMIL-HGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G L A L M R G TV YN +++ + + R K F VL M NG
Sbjct: 368 SGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF-------VVLNLMGRNG 420
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
N+ T+N +I C + + A+ + M + G N T+ +IK +
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++D M+ G + Y E + C I ++E A +F +M DG P+ TY L+ +
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
C ++D A +L + R+G + Y V L K
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 32/331 (9%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
D L + +G ++ + L R G V+ + RM + G + + V+ LC+
Sbjct: 169 DMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-GVQPNLLIYNAVINALCK 227
Query: 212 NGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+G + AE ++K +E+ PD +I G C LD A ++ +M + G E TV
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 271 YNCILDCVSKLCRKKDPFRLDSE----------------------------AEKVLLDME 302
Y+ +++ + R + F L E A ++ +DM+
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G NV T+ LIS LC + AI LF+RM G PN T+ LI L + R+
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+++ M G + Y E + C + ++AM V M GH+ + TY+ ++
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+C A + D +R+G KP E+
Sbjct: 468 KGYCDSGNTTSALRILD-LMRDG-GCKPDEW 496
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
+G T L + M RD G K D+ S ++ C+ A L + ++ + P++
Sbjct: 473 SGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
LI G+C D KLD A L M R G YN ++ ++K ++ F E
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK----QNNFSGAEEL 587
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
KV+++ G+ NV T+ +I LCK + A+++F +M E GC PN T+ LI++
Sbjct: 588 CKVMIE---EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L Q +V E + + ++ G + Y + + ++E A + +M G P
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704
Query: 415 SETYDLLM 422
TY +L+
Sbjct: 705 LWTYGVLI 712
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 26/300 (8%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
+ A+ + LV+N+ + K ++ + R G ++ + E M + Y D LV+
Sbjct: 393 YNALINILVENRRI---KYAFVVLNLMGRNGCSPNIVTYNE-MIKGYCILGDPKKAMLVM 448
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ + G+++ LV T N I IKG+C G A R+ M GG +
Sbjct: 449 NNMLQRGHSA---NLV--TYNTI----------IKGYCDSGNTTSALRILDLMRDGGCKP 493
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+Y ++ K+ + + F L +E M +G+ N T+ LI CK +
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNE-------MVDDGLCPNEVTYTALIDGYCKDEKL 546
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+ A L M GC PN T+ VLI L + +E+ M G Y
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LC A+ +F KM G P+ TY L+ +V++A LF E R+G+
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 205 VVEKLCENGYASYAEK---LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ C++G + A + L++D + PD+ LI G+C K++ A L EM
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCK--PDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G V Y ++D C+ + +LD+ A +L M+ +G NV+T+NVLI L
Sbjct: 524 DGLCPNEVTYTALID---GYCKDE---KLDT-ATSLLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K A +L M E G PN T+ +I L + EM ++M G +
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG-CLPNL 635
Query: 382 DYYEFLTRLCGIE-RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L R G E ++E+A ++F +++ G PD TY ++ + +V+ A
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 441 AVRNGVEVKPKEYRVDPRYLKK 462
++ G + Y V + LK
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKN 717
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 118/326 (36%), Gaps = 33/326 (10%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VD+ T + ID + + E M+R G + + + +++ L +
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS-GCRPNVQTYNVLIHGLTKQN 579
Query: 214 YASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
S AE+L K E IFP+ +I G C +G + LA EM+ E G +
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG----STSLALEMFNKMIEQGCLPN- 634
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
L S L R EAE + ++E +G+ + T+ +I + E A
Sbjct: 635 --LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692
Query: 333 FYRMGEWGCHPNETTFLVLIKSL------------------------YQAARVGEGDEMI 368
RM + GC P T+ VLIK L YQ M
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMS 752
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
++ + + ++ L R +A + M + G PD E Y+ L+
Sbjct: 753 AKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 812
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYR 454
VD A +F G EV Y+
Sbjct: 813 RNVDLAMGVFKHMSTQGCEVHLNGYK 838
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 299 LDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
LDM +G+ + ++ L+ +L ++ + + ++RM G PN + +I +L +
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
V + + ++ ++ + + Y + C ++ A+ VF +M +G P++ T
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y L+ C RV++A L E + +G+
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGI 316
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 121/322 (37%), Gaps = 36/322 (11%)
Query: 119 HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGR 178
H LT+ NFS +E + + I +V T + ID L + G
Sbjct: 573 HGLTKQNNFSGAEELCKVMIE--------EGIFPNVV---------TYTAMIDGLCKNGS 615
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICD 237
+ L F +M + G + + ++ L + G AE L + + + PD+
Sbjct: 616 TSLALEMFNKM-IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV--------SKLCRKKDPF- 288
+I+ + + GK++ A M + G + Y ++ + +L D
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVP 734
Query: 289 -------RLDSEAEKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
D +A V+ P +V+ N L+SNL R +A +L M G
Sbjct: 735 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 794
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P++ + L+ SL + V + M + G + Y E + LC + R ++A
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEAR 854
Query: 401 SVFEKMKTDGHNPDSETYDLLM 422
FE M NPD +L+
Sbjct: 855 ITFENMLMRTWNPDDVVQAVLI 876
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 32/260 (12%)
Query: 205 VVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+NG S A E K P+ LI+ +GK++EA+ L E+ R G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL--- 320
+ Y +++ + + F L M G + T+ VLI L
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNF-------LGRMIKAGCQPTLWTYGVLIKGLKNE 718
Query: 321 -----------------CKI---RRSEDAIKLF-YRMGEWGCHPNETTFLVLIKSLYQAA 359
C +DA+ + ++ E + L+ +L A
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R E +E++ M S G ++ Y L L + ++ AM VF+ M T G Y
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838
Query: 420 LLMTKWCAHNRVDKANALFD 439
L+ C +R +A F+
Sbjct: 839 ELICALCQLHRRKEARITFE 858
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 141/345 (40%), Gaps = 30/345 (8%)
Query: 107 SPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV------DNKEV 160
+PE A L F WL + F HT ++ + RR+ +V D E
Sbjct: 67 APEPATA-LAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAED 125
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
+ + A I + R G L + Y F +LR + +
Sbjct: 126 M--RVSADAIQAIRRTGSARLALS-----PKCYNF-----ALRSLARFDMTEYMGRVYSQ 173
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
LV+D + PD + +IK +C +G L A R R + GG E T N + V
Sbjct: 174 LVQDG---LLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNAL---VLG 227
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
CR + +A + L M G RN ++ +LI LC+ + +A+ LF M G
Sbjct: 228 YCRTGEL----RKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDG 283
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN F LI L ++ RVG+ + D M G Y + + R+ A+
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ E M+ +G +PD TY+ L+ C + ++A L + AV+ G
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 13/313 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + + D + N V T + I + GR L E ME++ G D +
Sbjct: 302 GRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKN-GCHPDDWT 360
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC+ AE+L+ + E F P LI G+C+ K D+A R+ +M
Sbjct: 361 YNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 419
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L + +++ + K KD + EA+++L ++ NG+ NV T+ +I
Sbjct: 420 SSKCKLDLQVFGKLINSLIK----KDRLK---EAKELLNEISANGLVPNVITYTSIIDGY 472
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + + A+++ M GC PN T+ L+ L + ++ + ++ +M+ G
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L C + A +FE M+ +G PD Y +L C R ++A +
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI-- 590
Query: 441 AVRNGVEVKPKEY 453
VR GV + Y
Sbjct: 591 -VRKGVALTKVYY 602
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 10/237 (4%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E L + +AN + P+ +I G+C GK+D A + + M R G + YN ++
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM--- 504
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L + K + A +L M+ +G+ NV T+ L+ C ++A +LF M +
Sbjct: 505 YGLVKDKKLHK----AMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P+E + VL +L +A R E I R G A+ K Y + +
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDF 617
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A ++ E+M +G PDS TY +L+ C R+++A + D+ G++ Y +
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 10/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I L A + L F M+RD G + + ++ LC++G A L N
Sbjct: 260 IQGLCEAKCVREALVLFLMMKRD-GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 318
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + +I G+ G++++A ++ M + G YN + + LC +K
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL---IYGLCDQKT-- 373
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EAE++L + G V TF LI+ C + +DA+++ +M C + F
Sbjct: 374 ---EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 430
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI SL + R+ E E+++ + + G Y + C +++ A+ V + M+
Sbjct: 431 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 490
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
DG P++ TY+ LM ++ KA AL + ++G+
Sbjct: 491 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 12/314 (3%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R K+ K + + + N V T S ID ++G+ L + MERD G + + +
Sbjct: 442 RLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD-GCQPNAWTY 500
Query: 203 RLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ L ++ A L+ K + I P+ L++G C + D A RL M +
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G + AY + D + K R ++ + + GV + LI
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSF----------IVRKGVALTKVYYTTLIDGFS 610
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K ++ A L RM + GC P+ T+ VL+ +L + R+ E ++D+M G
Sbjct: 611 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 670
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + + + + A ++ +M + GH P + TY + + +C R++ A L +
Sbjct: 671 AYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 730
Query: 442 VRNGVEVKPKEYRV 455
R GV Y +
Sbjct: 731 EREGVAPDVVTYNI 744
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 136/346 (39%), Gaps = 33/346 (9%)
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
+ + TD + + + F+V L + ID +AG ERM
Sbjct: 567 EHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM- 625
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYA-----EKLVKDTANEIFPDDKICDLLIKGWCV 245
D G D + +++ LC+ + A + ++ IF + D +++
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR---- 681
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
+GK D AKR+ EM G + Y ++ K R +D AE ++L ME G
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED-------AEDLILKMEREG 734
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA--ARVGE 363
V +V T+N+LI + + A RM C PN T+ +L+K L + A V
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794
Query: 364 GD--------------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
D ++++RM G Y + C R+E+A + + M
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G +P+ + Y LL+ C +KA + G + + + YR+
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 111/290 (38%), Gaps = 22/290 (7%)
Query: 161 LGPKTLASCIDRLVRAG----RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
L P A+ + L RA P L FFE + R GF+ DS ++ L +
Sbjct: 48 LAPSVTAAHVADLFRAESTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPA 107
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
E+LV N D D+ + +A + R L YN L
Sbjct: 108 QYERLVVSMLN---CSDTAEDMRVSA--------DAIQAIRRTGSARLALSPKCYNFALR 156
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+++ F + +V + +G+ + T+N +I + CK A + F +
Sbjct: 157 SLAR-------FDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLL 209
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
E G P T L+ + + + + M G + Y + LC + +
Sbjct: 210 LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCV 269
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+A+ +F MK DG +P+ + L++ C RV A LFD +NGV
Sbjct: 270 REALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGV 319
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 101/262 (38%), Gaps = 11/262 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID ++R G+ + M G K + + + C+ G AE L+ E
Sbjct: 676 IDEMLREGKHDHAKRMYNEMTSS-GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK----LCRK 284
+ PD ++LI G G +D A + M E Y +L + K R
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794
Query: 285 KDPFRLDSEAE-----KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
D + + E ++L M +G+ V T++ LI+ CK R E+A L M
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G PNE + +LIK + + M G+ + Y + LC E+
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 914
Query: 400 MSVFEKMKTDGHNPDSETYDLL 421
S+F + G+N D + +L
Sbjct: 915 KSLFCDLLELGYNHDEVAWKIL 936
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 145/338 (42%), Gaps = 28/338 (8%)
Query: 121 LTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNK--EVLGPKTL-ASCIDRLVRAG 177
+ +N T T + D +D + + K V+G L + I+ RAG
Sbjct: 237 IMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAG 296
Query: 178 ---RPTQVL-----GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
R +VL E ER YG +++ C+ G AE L+ D +
Sbjct: 297 NMRRAAKVLDECVGNGVEPNERTYG---------VLINGFCKIGQMEAAEMLLADMQGQG 347
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ + I + +I G+C G +D+A ++ M + G EL YN L C LCR
Sbjct: 348 VGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYN-TLAC--GLCRVN--- 401
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RLD EA+ +L M GV N T+ LIS CK +A +LF M E G P+ T+
Sbjct: 402 RLD-EAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTY 460
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
V+I + + E + M+ G+ Y + C +++ A+ +FE+MK
Sbjct: 461 NVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQ 520
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P+ Y L++ R + A L+D+ ++ G+
Sbjct: 521 RGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGL 558
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 16/315 (5%)
Query: 139 DYFGRRKDFKAIHDFL--VDNKEV---LGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
D + R+KD + + L ++N+ + +G T+ +D L A ++V F M+ +
Sbjct: 220 DCYVRQKDDGRVQEILEIMENEGIEATVGTYTI--LVDSLSTARDISKVEALFNEMKAN- 276
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
D V+ C G A K++ + N + P+++ +LI G+C G+++ A
Sbjct: 277 NVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAA 336
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L +M G L + +N ++D CRK + +A K+ ME GV ++ T
Sbjct: 337 EMLLADMQGQGVGLNQIIFNTMID---GYCRKG----MVDDALKIKAAMEKMGVELDIYT 389
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N L LC++ R ++A L + M E G PN T+ LI + + E + M
Sbjct: 390 YNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMA 449
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + I +A ++M+ G PD TY L+ C + +VD
Sbjct: 450 EKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVD 509
Query: 433 KANALFDEAVRNGVE 447
A LF+E + G E
Sbjct: 510 VALKLFEEMKQRGTE 524
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 42/244 (17%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+++ G C G++D+A+RL +M R G L + YN +LDC R+KD D +++
Sbjct: 182 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDC---YVRQKD----DGRVQEI 234
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM------GEW------------ 339
L ME G+ V T+ +L+ +L R LF M G+
Sbjct: 235 LEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCR 294
Query: 340 -----------------GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
G PNE T+ VLI + ++ + ++ M+ G + +
Sbjct: 295 AGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQII 354
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + C ++ A+ + M+ G D TY+ L C NR+D+A L +
Sbjct: 355 FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMI 414
Query: 443 RNGV 446
GV
Sbjct: 415 EMGV 418
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 115/316 (36%), Gaps = 43/316 (13%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI 235
AGR G ER + +VV+ LC++G A +L+ D + +
Sbjct: 154 AGRLADAAGLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNAL 213
Query: 236 C-DLLIKGWCV---DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS------------ 279
C + L+ + DG++ E + M G E Y ++D +S
Sbjct: 214 CYNSLLDCYVRQKDDGRVQEILEI---MENEGIEATVGTYTILVDSLSTARDISKVEALF 270
Query: 280 --------------------KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
CR + R A KVL + NGV N T+ VLI+
Sbjct: 271 NEMKANNVVGDVYLYTAVINAYCRAGNMRR----AAKVLDECVGNGVEPNERTYGVLING 326
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
CKI + E A L M G N+ F +I + V + ++ M+ G +
Sbjct: 327 FCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELD 386
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y LC + R+++A ++ M G P+ TY L++ C + +A LF
Sbjct: 387 IYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFR 446
Query: 440 EAVRNGVEVKPKEYRV 455
E G Y V
Sbjct: 447 EMAEKGATPSVVTYNV 462
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 28/160 (17%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK--LCRKKD 286
+ P+ LI C DG + EA+RL REM G V YN ++D +K R+ +
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAE 477
Query: 287 PFRLDSE--------------------------AEKVLLDMEYNGVPRNVETFNVLISNL 320
FR + E A K+ +M+ G NV + LIS L
Sbjct: 478 RFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGL 537
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
K RSE A +L+ M + G P+++ + L+ SL+ R
Sbjct: 538 AKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 577
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 7/227 (3%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E L + E +PD +LI+ C + + +A +L EM G + V YN + V
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVL---V 58
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
+ +C++ RLD EA K L M G NV T N+++ ++C R DA KL M
Sbjct: 59 NGMCKEG---RLD-EAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVR 114
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
GC P+ TF +LI L + +G +++++M + G Y L C +++++
Sbjct: 115 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDR 174
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A+ E M + G PD TY+ ++T C +VD A L ++ G
Sbjct: 175 AIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 8/251 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + +++E C A KL+ + + PD ++L+ G C +G+LDEA +
Sbjct: 15 DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M G + + +N IL + R D AEK+L +M G +V TFN+L
Sbjct: 75 NSMPSYGSQPNVITHNIILRSMCSTGRWMD-------AEKLLTEMVRKGCSPSVVTFNIL 127
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LC+ AI + +M GC PN ++ L+ + ++ + ++ M S G
Sbjct: 128 INFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y LT LC +++ A+ + ++ + G +P TY+ ++ + D+A
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247
Query: 437 LFDEAVRNGVE 447
L E G++
Sbjct: 248 LLHEMRGKGLK 258
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 10/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G K D + ++V +C+ G A K + + P+ +++++ C G+ +A
Sbjct: 46 GCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDA 105
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++L EM R G V +N +++ LCRK L A +L M +G N +
Sbjct: 106 EKLLTEMVRKGCSPSVVTFNILIN---FLCRKG----LLGRAIDILEKMPTHGCTPNSLS 158
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N L+ CK ++ + AI+ M GC+P+ T+ ++ +L + +V E+++++
Sbjct: 159 YNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLS 218
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S G + Y + L + + +QA+ + +M+ G PD TY L+ +V+
Sbjct: 219 SKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVE 278
Query: 433 KANALFDEAVRNGVEVKPKEY 453
+A F + G VKP +
Sbjct: 279 EAIKFFHDV--EGFGVKPNAF 297
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 17/287 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
++ + + GR + + F M YG + + + +++ +C G AEKL+ + +
Sbjct: 58 VNGMCKEGRLDEAIKFLNSMP-SYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG 116
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P ++LI C G L A + +M G +++YN +L C++K
Sbjct: 117 CSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLH---GFCKEKKMD 173
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A + L M G ++ T+N +++ LCK + + A++L ++ GC P T+
Sbjct: 174 R----AIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITY 229
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEK 405
+I L + + + E++ M+ G K D + + + G+ R +E+A+ F
Sbjct: 230 NTVIDGLSKVGKTDQAVELLHEMRGKGL---KPDVITYSSLIAGLSREGKVEEAIKFFHD 286
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
++ G P++ TY+ +M C + D+A + G KP E
Sbjct: 287 VEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKG--CKPTE 331
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 29/189 (15%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
+PD + ++ C DGK+D A L ++ G + YN ++D +SK+ +
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247
Query: 290 L----------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
L EA K D+E GV N T+N ++ LC
Sbjct: 248 LLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLC 307
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K ++++ AI M GC P E ++ +LI+ + E E+++ + S G + K
Sbjct: 308 KAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG-VVKKS 366
Query: 382 DYYEFLTRL 390
+ + RL
Sbjct: 367 SAEQVVVRL 375
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 18/293 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ LV+ R V+ F++ E + G D +L +++ C + + A + +
Sbjct: 65 LSSLVKNKRYPTVISLFKQFEPN-GITPDLCTLSILINCFCHQAHITLAFSVFANILKRG 123
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PD + LIKG C G++ + ++ GF+L V+Y +++ + K K
Sbjct: 124 FHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVA 183
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL L +E + V +V +N +I++LCK + DA ++ M G P+ T+
Sbjct: 184 RL-------LRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTY 236
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER------IEQAMSV 402
LI ++ E +++ MK D Y F + + + +++AMS+
Sbjct: 237 TTLIHGFCIMGKMKEAFSLLNEMKLKNI---NPDVYTFSVLIDALGKEGKKKMVDEAMSL 293
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
FE+MK PD TY+ L+ C ++ +++A AL E +G++ Y +
Sbjct: 294 FEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTI 346
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 130/310 (41%), Gaps = 14/310 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K HD +V L + + I+ L +AG V ++E + K D
Sbjct: 142 GEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLE-GHSVKPDVVM 200
Query: 202 LRLVVEKLCENGYAS-----YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
++ LC+N Y+E +VK I PD LI G+C+ GK+ EA L
Sbjct: 201 YNTIINSLCKNKLLGDACDVYSEMIVKG----ISPDVVTYTTLIHGFCIMGKMKEAFSLL 256
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM ++ ++D + K +KK + EA + +M++ + ++ T+N L
Sbjct: 257 NEMKLKNINPDVYTFSVLIDALGKEGKKK----MVDEAMSLFEEMKHKNMIPDIVTYNSL 312
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I LCK E AI L M E G P+ ++ +L+ L + R+ E + G
Sbjct: 313 IDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGC 372
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + LC +AM + KM+ G P++ T+ ++ + DKA
Sbjct: 373 HLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEK 432
Query: 437 LFDEAVRNGV 446
+ E + G+
Sbjct: 433 ILREMIARGL 442
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 15/227 (6%)
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
++K + + + + D +K G +D+A+ + +EM GF V +N ++ SK
Sbjct: 425 VLKGLLSSVMSYNMVIDCFVKA----GAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSK 480
Query: 281 LCRKKDPFRLDSEAEKVLLDM--EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L + KV+L M E+ +P ++ TF LI LC + +DA F M E
Sbjct: 481 LGNVHNA--------KVVLKMLMEHGFMP-DIITFTSLIDGLCNTHQLDDAFVCFEEMAE 531
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
WG PN T+ VL+ +L A V + +++++MK G + + C + ++++
Sbjct: 532 WGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDK 591
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A +F M G PDS TY+ L+ C RV+KA + R+G
Sbjct: 592 AEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSG 638
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 135/313 (43%), Gaps = 26/313 (8%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R K ++ + D+L ++ L P + + L + + + F +RM G+ D +
Sbjct: 309 RDKAYRMLSDWL-GHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMSAR-GYLLDSTAF 366
Query: 203 RLV---------VEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
+V V LCE + +K+ N P + ++IK +A
Sbjct: 367 GIVMSCSLKCLEVSDLCE-----LLDSFIKNGGN---PGFDVYIMVIKSLLNCKNFSKAN 418
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
M G ++YN ++DC K +D +AE+++ +M+ G N+ TF
Sbjct: 419 HYLGHMVLKGLLSSVMSYNMVIDCFVK------AGAVD-KAEEIVKEMQDKGFLPNLVTF 471
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LIS K+ +A + + E G P+ TF LI L ++ + + M
Sbjct: 472 NTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE 531
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G + Y + LC + +A+ + KMK DG PD+ +++ L+ +C +VDK
Sbjct: 532 WGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDK 591
Query: 434 ANALFDEAVRNGV 446
A +F++ VR GV
Sbjct: 592 AEDIFNDMVRFGV 604
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID V+AG + + M+ D GF + + ++ + G A+ ++K
Sbjct: 440 IDCFVKAGAVDKAEEIVKEMQ-DKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHG 498
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PD LI G C +LD+A EM G YN ++ LC
Sbjct: 499 FMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMH---TLCSAGHV- 554
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++A +L M+ +GV + +FN LI + C++R+ + A +F M +G P+ T+
Sbjct: 555 ---NKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTY 611
Query: 349 LVLIKSLYQAARVGEGDEMI-DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
LIK+L RV + E++ R +S + Y+ + L + + +A + +K
Sbjct: 612 NSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDK 669
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
+ L R G P + G R G + ++ + +VE G A YA E V+
Sbjct: 125 VGALWRRG-PVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLG 183
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + + LI G +D A ++M G YN + V +CR+
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSL---VHGVCRRG--- 237
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA +++ ME G+ NV T+ +L+ C R E+A ++ +M E G P+E T+
Sbjct: 238 -IVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATY 296
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ +++ + M+ ++ + L L + ++A+ ++M
Sbjct: 297 RTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMSA 356
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G+ DS + ++M+ V L D ++NG
Sbjct: 357 RGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNG 393
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/393 (19%), Positives = 142/393 (36%), Gaps = 68/393 (17%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPKTLA--SCIDRLVRAGRPTQVLGFF 186
++E + + +GR + H+ V + L P T + I VRAG F
Sbjct: 152 SEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRF 211
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
++M D G + D+ + +V +C G A +LV+ E I P+ +L+ G+C
Sbjct: 212 QQMPAD-GCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCN 270
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS------------- 292
G+++EA R+ +M G Y ++ V + + +R+ S
Sbjct: 271 AGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSA 330
Query: 293 ---------------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
EA + M G + F +++S K D +L
Sbjct: 331 CHTMLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFI 390
Query: 338 EWGCHPNETTFLVLIKSL-----------------------------------YQAARVG 362
+ G +P ++++IKSL +A V
Sbjct: 391 KNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVD 450
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ +E++ M+ G+ + ++ + + A V + + G PD T+ L+
Sbjct: 451 KAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLI 510
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C +++D A F+E GV + Y V
Sbjct: 511 DGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNV 543
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 13/298 (4%)
Query: 154 LVDNKEVLGPKT----LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L+D LG KT S I+ + G + G RM D+ K D S +++
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV-DWNLKPDSYSYNTLLDGY 412
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C G+ S A L E I P + L+KG C G D+A ++ M + G
Sbjct: 413 CREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDE 472
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y+ +LD + K+ + F S K D+ G ++ TFN +IS LCK+ + +
Sbjct: 473 VGYSTLLDGLFKM----ENFEGASTLWK---DILARGFTKSRITFNTMISGLCKMGKMVE 525
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A ++F +M + GC P+ T+ LI +A+ VG+ ++ M+ + + Y ++
Sbjct: 526 AEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLIS 585
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L R+ + + +M G P+ TY L+ WC +DKA + + E NG+
Sbjct: 586 GLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 145/365 (39%), Gaps = 20/365 (5%)
Query: 93 VTPTPSL-----VQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
+ PT SL V NF P ++ H L++ + T L+ D +
Sbjct: 80 LNPTASLGFFQFVSKQQNFRPNV-KSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRG 138
Query: 148 KAIHDFLVD--NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
I D LV + P + V G L F+ M + G S +
Sbjct: 139 NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGK-CGRIPSLRSCNSL 197
Query: 206 VEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ L +NG A + + I PD + +++ +C DGK+DEA ++M G
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK-VLLDMEYNGVPRNVETFNVLISNLCKI 323
E V Y+ +++ L D EA K VL M GV RNV T+ +LI CK
Sbjct: 258 EPNIVTYHSLINGYVSLG--------DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309
Query: 324 RRSEDAIKLFYRMGEWGCH-PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ ++A K+ M E P+E + VLI + ++ + ++D M G
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ C I +A V +M PDS +Y+ L+ +C +A L D+ +
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429
Query: 443 RNGVE 447
+ G+E
Sbjct: 430 QEGIE 434
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 132/307 (42%), Gaps = 45/307 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ V G G + M + G R+ + L+++ C+ AEK+++
Sbjct: 263 TYHSLINGYVSLGDVEAAKGVLKFMS-EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 321
Query: 225 TANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E + PD++ +LI G+C GK+D+A RL EM R G + N + ++ C
Sbjct: 322 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL---INGYC 378
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS------------------------ 318
++ + EAE V+ M + + ++N L+
Sbjct: 379 KRGEI----HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434
Query: 319 -----------NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
LC++ +DA+++++ M + G P+E + L+ L++ +
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 494
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ + G+ + + ++ LC + ++ +A +F+KMK G +PD TY L+ +C
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554
Query: 428 HNRVDKA 434
+ V +A
Sbjct: 555 ASNVGQA 561
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 16/241 (6%)
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
E + + ++SY E T N + + IC ++ G G++DEA L ++M GF
Sbjct: 625 EGMLDKAFSSYFEM----TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF-- 678
Query: 267 GTVAYNCILDC-VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+ C L + +K LD + LL P N+ +N+ I+ LCK +
Sbjct: 679 -FPDHECFLKSDIRYAAIQKIADSLDESCKTFLL-------PNNI-VYNIAIAGLCKTGK 729
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+DA + F + G P+ T+ LI A V E + D M G Y
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LC E +++A +F K+ G P+ TY+ L+ +C +D A L D+ + G
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 446 V 446
+
Sbjct: 850 I 850
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 45/287 (15%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ + L R GR + ++M D+GF D + + + A+ L +
Sbjct: 651 STMVSGLYRLGRIDEANLLMQKMV-DHGFFPDHECF--LKSDIRYAAIQKIADSLDESCK 707
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ P++ + ++ I G C GK+D+A+R + GF Y ++ S +
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
FRL E M G+ N+ T+N LI+ LCK + A +LF+++ + G PN
Sbjct: 768 AFRLRDE-------MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV 820
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI GY C I ++ A + +KM
Sbjct: 821 TYNTLID---------------------GY--------------CKIGNMDAAFKLKDKM 845
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+G +P TY L+ C H ++++ L ++ ++ GV+ K EY
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEY 892
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 115/286 (40%), Gaps = 12/286 (4%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
++ S ++ LV+ G +++M R G D + ++V C++G A VK
Sbjct: 192 RSCNSLLNNLVKNGETHTAHYVYQQMIR-VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 250
Query: 224 DTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
N + P+ LI G+ G ++ AK + + M G V Y ++ K C
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 310
Query: 283 RKKDPFRLDSEAEKVLLDMEYNG--VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ EAEKVL M+ VP + + VLI C+ + +DA++L M G
Sbjct: 311 KM-------DEAEKVLRGMQEEAALVP-DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 362
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
N LI + + E + +I RM Y L C +A
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 422
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ +KM +G P TY+ L+ C D A ++ ++ GV
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 468
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 16/281 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + G+ + GF ++ME + G + + + ++ G A+ ++K + +
Sbjct: 233 VNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----AYNCILDCVSKLCRK 284
+ + LLIKG+C K+DEA+++ R M E V AY ++D + +
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE---EAALVPDERAYGVLIDGYCRTGKI 348
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D RL E ++ G+ N+ N LI+ CK +A + RM +W P+
Sbjct: 349 DDAVRLLDEMLRL-------GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
++ L+ + E + D+M G Y L LC + + A+ ++
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M G PD Y L+ + A+ L+ + + G
Sbjct: 462 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 502
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 44/288 (15%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLD 250
GF + + + ++ LC+ G AE++ +KD PD LI G+C +
Sbjct: 502 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS--PDGITYRTLIDGYCKASNVG 559
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+A ++ M R YN + +S L + + RL E +L +M G+ N+
Sbjct: 560 QAFKVKGAMEREPISPSIEMYNSL---ISGLFKSR---RL-VEVTDLLTEMGIRGLTPNI 612
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI CK + A ++ M E G N ++ LY+ R+ E + ++ +
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672
Query: 371 MKSAGY---------------AIGKKD-----------------YYEFLTRLCGIERIEQ 398
M G+ AI K Y + LC +++
Sbjct: 673 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
A F + G PD+ TY L+ + A VD+A L DE +R G+
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGL 780
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 15/227 (6%)
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
++K + + + + D +K G +D+A+ + +EM GF V +N ++ SK
Sbjct: 425 VLKGLLSSVMSYNMVIDCFVKA----GAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSK 480
Query: 281 LCRKKDPFRLDSEAEKVLLDM--EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L + KV+L M E+ +P ++ TF LI LC + +DA F M E
Sbjct: 481 LGNVHNA--------KVVLKMLMEHGFMP-DIITFTSLIDGLCNTHQLDDAFVCFEEMAE 531
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
WG PN T+ VL+ +L A V + +++++MK G + + C + ++++
Sbjct: 532 WGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDK 591
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
A +F M G PDS TY+ L+ C RV+KA + R+G
Sbjct: 592 AEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSG 638
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 26/313 (8%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R K ++ + D+L ++ L P + + L + + + F +RM G+ D +
Sbjct: 309 RDKAYRMLSDWL-GHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSAR-GYLLDSTAF 366
Query: 203 RLV---------VEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
+V V LCE + +K+ N P + ++IK +A
Sbjct: 367 GIVMSCALKCLEVSDLCE-----LLDSFIKNGGN---PGFDVYIMVIKSLLNCKNFSKAN 418
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
M G ++YN ++DC K +AE+++ +M+ G N+ TF
Sbjct: 419 HYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV-------DKAEEIVKEMQDKGFLPNLVTF 471
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LIS K+ +A + + E G P+ TF LI L ++ + + M
Sbjct: 472 NTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE 531
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G + Y + LC + +A+ + KMK DG PD+ +++ L+ +C +VDK
Sbjct: 532 WGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDK 591
Query: 434 ANALFDEAVRNGV 446
A +F++ VR GV
Sbjct: 592 AEDIFNDMVRFGV 604
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID V+AG + + M+ D GF + + ++ + G A+ ++K
Sbjct: 440 IDCFVKAGAVDKAEEIVKEMQ-DKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHG 498
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
F PD LI G C +LD+A EM G YN ++ LC
Sbjct: 499 FMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMH---TLCSAGHV- 554
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++A +L M+ +GV + +FN LI + C++R+ + A +F M +G P+ T+
Sbjct: 555 ---NKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTY 611
Query: 349 LVLIKSLYQAARVGEGDEMI-DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
LIK+L RV + E++ R +S + Y+ + L + + +A + +K
Sbjct: 612 NSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDK 669
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
+ L R G P + G R G + ++ + +VE G A YA E V+
Sbjct: 125 VGALWRRG-PVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLG 183
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + + LI G +D A ++M G YN + V +CR+
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSL---VHGVCRRG--- 237
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA +++ ME G+ NV T+ +L+ C R E+A ++ +M E G P+E T+
Sbjct: 238 -IVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATY 296
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ +++ + M+ ++ + L L + ++A+ ++M
Sbjct: 297 RTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSA 356
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G+ DS + ++M+ V L D ++NG
Sbjct: 357 RGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNG 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/393 (19%), Positives = 141/393 (35%), Gaps = 68/393 (17%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPKTLA--SCIDRLVRAGRPTQVLGFF 186
++E + + +GR + H+ V + L P T + I VRAG F
Sbjct: 152 SEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRF 211
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
++M D G + D + +V +C G A +LV+ E I P+ +L+ G+C
Sbjct: 212 QQMPAD-GCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCN 270
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL--------------- 290
G+++EA R+ +M G Y ++ V + + +R+
Sbjct: 271 AGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSA 330
Query: 291 -----------DSEAEKVLLD--MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
D E V + M G + F +++S K D +L
Sbjct: 331 CHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFI 390
Query: 338 EWGCHPNETTFLVLIKSL-----------------------------------YQAARVG 362
+ G +P ++++IKSL +A V
Sbjct: 391 KNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVD 450
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ +E++ M+ G+ + ++ + + A V + + G PD T+ L+
Sbjct: 451 KAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLI 510
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C +++D A F+E GV + Y V
Sbjct: 511 DGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNV 543
>gi|326525315|dbj|BAK07927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 146/343 (42%), Gaps = 24/343 (6%)
Query: 95 PTP---SLVQSTLNFSPEAGRAILGFNHWLTQ--NANFSHTDETLSFFTDYFGRRKDFKA 149
PTP + VQ TL+ R L F HW N T TLS D G+ +F
Sbjct: 24 PTPLDAAAVQETLSLYTNDWRRALDFFHWSASPGGGNLRPTPSTLSRAVDILGKHFEFPQ 83
Query: 150 IHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
L+ + + P L + ++RL A + FE G RD+ S L+
Sbjct: 84 ATSLLLAHHDPTDPAFLRPALRALLNRLAAANLVDDAVRAFESTAASVGL-RDEASFHLL 142
Query: 206 VEKLCENGYASYAEKLV----KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ LC++ A L P K +LL++GW ++ +M
Sbjct: 143 IDALCDHRRVDEAHHLCLGGRAAAPPPFPPGTKTHNLLLRGWAKARAWARLRQHWLDMDA 202
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G +Y+ +D ++K P++ A K+ +M+ +P ++ +N+ I +
Sbjct: 203 RGVAKDLHSYSIYMDALAK---SGKPWK----AVKLFKEMKQKRLPVDIVAYNIAIHAVG 255
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ A++++ +M E GC PN TF ++K L + R EG + +M AG +
Sbjct: 256 LAEGVDFAVRMYRQMIEAGCRPNTATFNTIVKLLCKEGRFKEGYAFVQQMHKAGCEPNEL 315
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
Y+ F L R ++ +++FEKM G P +TY +L+ +
Sbjct: 316 TYHCFFQYL---SRPQEVLALFEKMLQRGCRPRMDTYVMLIKR 355
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 17/319 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K HD +V L + + I+ L + G V ++E + K D
Sbjct: 147 GEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLE-GHSVKPDVVM 205
Query: 202 LRLVVEKLCEN---GYAS--YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
++ LC+N G A Y+E +VK I P+ + L+ G+C+ G L EA L
Sbjct: 206 YNTIIHSLCKNKLLGDACDLYSEMIVKG----ISPNVVTYNALVYGFCIMGHLKEAFSLL 261
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM +N ++D + K + K A+ VL M + +V T+N L
Sbjct: 262 NEMKLKNINPDVCTFNTLIDALGKEGKMK-------AAKIVLAVMMKACIKPDVVTYNSL 314
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I + + ++A +FY M + G PN T+ +I L + V E + + MK
Sbjct: 315 IDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNM 374
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + LC +E+A+++ +KMK G PD +Y +L+ C R++ A
Sbjct: 375 IPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKE 434
Query: 437 LFDEAVRNGVEVKPKEYRV 455
F + G + + Y V
Sbjct: 435 FFQRLLVKGYHLNVQTYNV 453
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 7/218 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD L+ G+ + +L AK + M + G Y ++D LC+KK
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMID---GLCKKKTV- 592
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA + +M++ + N+ T+ LI LCK E AI L M E G P+ ++
Sbjct: 593 ---DEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSY 649
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ L ++ R+ E+ R+ GY + + Y + LC ++A+ + KM+
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PD+ T+D+++ + DKA + E + G+
Sbjct: 710 KGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 11/231 (4%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD + LI G+ K+ AK + M + G Y ++D LC++K
Sbjct: 304 IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMID---GLCKEK--- 357
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA + +M+Y + ++ T+ LI LCK E AI L +M E G P+ ++
Sbjct: 358 -MVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 416
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ +L + R+ E R+ GY + + Y + LC + +AM + KM+
Sbjct: 417 TILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEG 476
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE----VKPKEYRV 455
G PD+ T+ ++ + DKA + E + G++ V+ KE ++
Sbjct: 477 KGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKI 527
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 129/342 (37%), Gaps = 53/342 (15%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + ID L + + + FE M+ D + +++ LC+N + A L K
Sbjct: 344 RTYTTMIDGLCKEKMVDEAMSLFEEMKYK-NMIPDIVTYTSLIDGLCKNHHLERAIALCK 402
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ I PD +L+ C G+L+ AK + + G+ L YN +++ + K
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKAD 462
Query: 283 RKKDPFRLDSE----------------------------AEKVLLDMEYNGVPR------ 308
+ L S+ AEK+L +M G+
Sbjct: 463 LFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRL 522
Query: 309 -----------------NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+V T+ L+ + + A +FY M + G PN + ++
Sbjct: 523 KEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIM 582
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L + V E + + MK Y + LC +E+A+++ ++MK G
Sbjct: 583 IDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGI 642
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
PD +Y +L+ C R++ A +F + G + + Y
Sbjct: 643 QPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVY 684
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 124/300 (41%), Gaps = 30/300 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ LV V+ F++ E + G D +L +++ C + ++A ++ +
Sbjct: 70 LSSLVNNKHYPTVISLFKKFESN-GATPDLCTLNILMNCFCHLTHITFAFSVLANILKRG 128
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD---------CVS 279
+ P+ + LIKG C G++ +A ++ GF+L V+Y +++ V+
Sbjct: 129 YHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVA 188
Query: 280 KLCRKKDPF-------------------RLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L RK + +L +A + +M G+ NV T+N L+
Sbjct: 189 RLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGF 248
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C + ++A L M +P+ TF LI +L + ++ ++ M A
Sbjct: 249 CIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDV 308
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + + +++ A VF M G P+ TY ++ C VD+A +LF+E
Sbjct: 309 VTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEE 368
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 148/385 (38%), Gaps = 70/385 (18%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFL-VDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T + D G+ KA L V K + P T S ID + F M
Sbjct: 275 TFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM 334
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGK 248
+ G + + +++ LC+ A L ++ + PD LI G C +
Sbjct: 335 AQS-GVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHH 393
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L+ A L ++M G + +Y +LD + K R ++ A++ + G
Sbjct: 394 LERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN-------AKEFFQRLLVKGYHL 446
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY------------ 356
NV+T+NV+I+ LCK +A+ L +M GC P+ TF +I +L+
Sbjct: 447 NVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKIL 506
Query: 357 --------QAAR----------------------------VGEGDEMIDRMKSAGYAI-- 378
Q AR + +G +++ +K A Y
Sbjct: 507 REMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYS 566
Query: 379 --------GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+ Y + LC + +++AMS+FE+MK P+ TY L+ C ++
Sbjct: 567 MAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHH 626
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+++A AL E +G++ Y +
Sbjct: 627 LERAIALLKEMKEHGIQPDVYSYTI 651
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 61/145 (42%)
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
E NG ++ T N+L++ C + A + + + G HPN T LIK L +
Sbjct: 90 ESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEI 149
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ D++ + G+ + + Y + LC + + K++ PD Y+ +
Sbjct: 150 KKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI 209
Query: 422 MTKWCAHNRVDKANALFDEAVRNGV 446
+ C + + A L+ E + G+
Sbjct: 210 IHSLCKNKLLGDACDLYSEMIVKGI 234
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 143/351 (40%), Gaps = 33/351 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S I L ++G+ + M + G D +++ C+ G A KL +
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMKR-GVFPDHVIYTTLIDGFCKLGNTQAAYKLFSE 240
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A EI PD LI G GK+ EA +L EM + GFE V Y ++D KL
Sbjct: 241 MEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE 300
Query: 284 KKDPFRLDSE----------------------------AEKVLLDMEYNGVPRNVETFNV 315
K F L ++ A ++L +M G+ N+ T+N
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+++ LCK A+KL M E G HP+ T+ L+ + Y+ + + E++ M G
Sbjct: 361 IVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG 420
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ + LC ++E + + M G P++ TY+ +M ++C N + +
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST 480
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRL 486
++ GV Y + +K + K+ L ++M KR L
Sbjct: 481 EIYRGMCAQGVVPDSNTYNI---LIKGHCKARNMKEAWFLHKEMVEKRFNL 528
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 9/282 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+ ID G +V+ + M+ G K + + ++ LC++G EK++++
Sbjct: 149 TTIIDGYCHVGELQKVVQLVKEMQLK-GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMM 207
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+FPD I LI G+C G A +L EM ++A++ ++ C
Sbjct: 208 KRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALI------CGLS 261
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
++ EA+K+ +M G + T+ LI CK+ + A L +M + G PN
Sbjct: 262 GSGKV-VEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV 320
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ L L ++ + +E++ M G + Y + LC I QA+ + E+
Sbjct: 321 VTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEE 380
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
MK G +PD+ TY LM + + KA L E + G++
Sbjct: 381 MKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQ 422
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 7/224 (3%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD +I G+C G+L + +L +EM G + Y+ I + LC+
Sbjct: 142 IPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSI---ILLLCKSGKVV- 197
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
E EKVL +M GV + + LI CK+ ++ A KLF M P+ F
Sbjct: 198 ---EGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFS 254
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI L + +V E D++ + M G+ + Y + C + +++A + +M
Sbjct: 255 ALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQI 314
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G P+ TY L C +D AN L E R G+++ Y
Sbjct: 315 GLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTY 358
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 109/265 (41%), Gaps = 30/265 (11%)
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
N + + E+L+ T + D + D+ + G L+EA++ ++ G L +
Sbjct: 19 NSFTHFVERLIY-TYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSC 77
Query: 272 NCILDCVSK-------------------LCRKKDP--------FRLDS--EAEKVLLDME 302
N L C+S +C + FRL EA +L+ ME
Sbjct: 78 NLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRME 137
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
+ G +V ++ +I C + + ++L M G PN T+ +I L ++ +V
Sbjct: 138 FKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVV 197
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
EG++++ M G Y + C + + A +F +M+ PDS + L+
Sbjct: 198 EGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALI 257
Query: 423 TKWCAHNRVDKANALFDEAVRNGVE 447
+V +A+ LF+E ++ G E
Sbjct: 258 CGLSGSGKVVEADKLFNEMIKKGFE 282
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 214 YASYAEKLVK----DTANEIFPDDKIC-----------DLLIKGWCVDGKLDEAKRLARE 258
Y + A+ L K DTANE+ + +C + ++ G C G + +A +L E
Sbjct: 323 YTALADGLCKSGELDTANELLHE--MCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEE 380
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M G T+ Y ++D K +A ++L +M G+ V TFNVL++
Sbjct: 381 MKEAGLHPDTITYTTLMDAYYKTGEM-------VKARELLREMLDRGLQPTVVTFNVLMN 433
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC + ED +L M E G PN T+ ++K + E+ M + G
Sbjct: 434 GLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVP 493
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A + ++M N + +Y+ L+ + ++ +A LF
Sbjct: 494 DSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLF 553
Query: 439 DEAVRNGVEVKPKEYR--VDPRY 459
+E R G+ + Y VD Y
Sbjct: 554 EEMRREGLVASAEIYNLFVDMNY 576
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 124/303 (40%), Gaps = 9/303 (2%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G K +H+ +V T + D L ++G M R G + +
Sbjct: 298 LGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK-GLQLNIS 356
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ +V LC+ G A KL+++ + PD L+ + G++ +A+ L REM
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREM 416
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G + V +N +++ + + +D E++L M G+ N T+N ++
Sbjct: 417 LDRGLQPTVVTFNVLMNGLCMSGKLED-------GERLLKWMLEKGIMPNAATYNSIMKQ 469
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C + +++ M G P+ T+ +LIK +A + E + M + +
Sbjct: 470 YCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLT 529
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + +++ +A +FE+M+ +G +E Y+L + ++ L D
Sbjct: 530 ASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCD 589
Query: 440 EAV 442
EA+
Sbjct: 590 EAI 592
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 9/284 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFE-RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
++ S ++ +++ G + L F+E + + S LV++ +C+ G A ++
Sbjct: 136 RSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVF 195
Query: 223 KDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
++ A + PD L+ G C + ++DEA L EM G +V +N + ++ L
Sbjct: 196 REMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL---INGL 252
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C+K D R+ K++ +M G N T+N +I+ LC + + A+ L RM C
Sbjct: 253 CKKGDMVRVT----KLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC 308
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN+ T+ LI L + R +G ++ ++ G+ + Y ++ L E+ E+AM
Sbjct: 309 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 368
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+++KM G P+ Y L+ C ++D+A + E V G
Sbjct: 369 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L + R + + + M+ + F + +++ LC+ G KLV +
Sbjct: 209 TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSV-TFNVLINGLCKKGDMVRVTKLVDN 267
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P++ + +I G C+ GKLD+A L M V Y +++ + K R
Sbjct: 268 MFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGR 327
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D L L +E G N ++ LIS L K +SE+A+ L+ +M E GC P
Sbjct: 328 SVDGVHL-------LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQP 380
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N + LI L + ++ E E++ M + G Y + ++A+ V+
Sbjct: 381 NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVW 440
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++M + P+ Y +L+ C ++ +A ++ + G+
Sbjct: 441 KEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 483
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G + K +EA L ++M G + V Y+ ++D LCR+ +LD EA+++L
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALID---GLCREG---KLD-EAKEIL 405
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G N T++ LI K S+ AI+++ M + C PNE + VLI L +
Sbjct: 406 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 465
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM--KTDGHNPDSE 416
++ E M M G Y + LC +E + +F +M + PD
Sbjct: 466 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 525
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY++L+ C N + A L + + G
Sbjct: 526 TYNILLRALCKQNSISHAIDLLNSMLDRG 554
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 146/351 (41%), Gaps = 29/351 (8%)
Query: 88 LIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
++ S P + +N + GR++ G H L+ H ++ T G K+
Sbjct: 303 MVASKCVPNDVTYGTLINGLVKQGRSVDGV-HLLSSLEERGHHANEYAYSTLISGLFKEE 361
Query: 148 KAIHDFLVDNKEV---LGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
K+ + K V P + ++ ID L R G+ + M + G + +
Sbjct: 362 KSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM-VNKGCTPNAFTY 420
Query: 203 RLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ + G + A ++ K+ A N P++ +LI G C DGKL EA + M
Sbjct: 421 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 480
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G VAY+ ++ + + +L +E +L E + P +V T+N+L+ LC
Sbjct: 481 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE----MLCQESDSQP-DVVTYNILLRALC 535
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR-VGEGDEMIDRMKSAGYAIGK 380
K AI L M + GC+P+ T + + +L + +G E +D
Sbjct: 536 KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD----------- 584
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
E + RL +RI A + E M P++ T++ ++ + C +V
Sbjct: 585 ----ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 631
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 157/402 (39%), Gaps = 40/402 (9%)
Query: 49 PTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSP 108
P+SN T ARSLS LL A P P++ R+ + H P L +L P
Sbjct: 29 PSSNLTTAS------ARSLSASLLAVAPALPTPVANRVLKLLWHHAPRALLFFHSLLHLP 82
Query: 109 EAGRAI--LGFNHWLTQNANFSHTDETLSFFTDYFGR-RKDFKAIHDFLVDNKEVLGPKT 165
A+ + L +A H + + F R R F P+T
Sbjct: 83 ARAHAVSPCTIDLALDLSARLRHPRQLTNSILALFPRLRLPFT--------------PRT 128
Query: 166 LASCIDRLVRAGR-PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+R + R P + F + R + +D +++ L ++ +AS A LV+
Sbjct: 129 FPILFERFAASQRRPDIAVRLFLSLHRSHRVVQDLPLFNSLLDALGKSRHASKAASLVRA 188
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
PD + L GWC A L R+M G YN IL
Sbjct: 189 LERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIIL--------- 239
Query: 285 KDPFRLDS--EAEKVLLDMEYNGVPR-----NVETFNVLISNLCKIRRSEDAIKLFYRMG 337
K FR A L M+ G ++ ++ +I L + + A KLF M
Sbjct: 240 KGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMS 299
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ GC P+ T+ LI+ + + V + + D M Y Y + LC + +I+
Sbjct: 300 KEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKID 359
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+AM + E+MK +G P +TY++L+ ++KA LF+
Sbjct: 360 RAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFE 401
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 155/344 (45%), Gaps = 11/344 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D +A+++ ++ T + + + G + L F+ + GF D +
Sbjct: 24 GRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVK-RGFVPDVVT 82
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ C+ A+++++ +E + PD + L+ G C +G++DEA+ L +
Sbjct: 83 YNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---IV 139
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
GF + Y+ + +S LCR+ R SEA K+ + G V T+N+LI L
Sbjct: 140 DKGFSPNVITYSTL---ISGLCRE---LRGVSEALKLFGSVLKQGYEPEVPTYNILIDGL 193
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K R +A +LF + + G P+ T+ V I L +A RV + M+ M G
Sbjct: 194 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 253
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + LC +R+++A + M+ G +P++ +++ L+ C + KA F E
Sbjct: 254 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 313
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRR 484
++ GV+ Y + L K + K+ TL + M K R
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L++ R + F + + +G + D + + ++ LC+ G A ++KD +
Sbjct: 190 IDGLLKEDRVNEAFELFSGLVK-HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + +I G C + ++DEA+ L M G +++N + + CR
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL---ICGQCRAGKW- 304
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR---RSEDAIKLFYRMGEWGCHPNE 345
+A +M GV V T+N+L+ LCK R R ++AI LF M E G P+
Sbjct: 305 ---KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 361
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L +A ++ + ++ M++ G Y ++ LCG+E++++A+ +F
Sbjct: 362 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVA 421
Query: 406 MKTDGHNPDSETYDLLMT 423
M G PD+ TY +++
Sbjct: 422 MVEKGCVPDTITYGTIIS 439
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 10/218 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + I G C G++++A + ++M G V++N + ++ LC++K R+
Sbjct: 216 PDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV---INGLCKEK---RV 269
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D EAE +L ME G N +FN LI C+ + + A+ F M + G P T+ +
Sbjct: 270 D-EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNI 328
Query: 351 LIKSLYQA---ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
L+ L +A R+ E + D M G Y + L +++ A + M+
Sbjct: 329 LVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 388
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ TY+ L++ C +VD+A LF V G
Sbjct: 389 AKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKG 426
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
+P+ + L+ G C G++ +A+ L M + G+ V YN +L K+ + +
Sbjct: 7 WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALK 66
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ A K G +V T+N LI+ CK + ++A ++ RM P+ T+
Sbjct: 67 IFDGAVK-------RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC-GIERIEQAMSVFEKMKT 408
L+ L + RV E +I G++ Y ++ LC + + +A+ +F +
Sbjct: 120 SLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G+ P+ TY++L+ +RV++A LF V++G+E Y V
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 223
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 39/220 (17%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
ID L +AGR L + M+ + G D S V+ LC+ AE L+ A
Sbjct: 225 IDGLCKAGRVEDALLMLKDMD-EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ + LI G C GK +A +EM + G + V YN ++D LC+ +
Sbjct: 284 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD---GLCKARQEG 340
Query: 289 RLDS----------------------------------EAEKVLLDMEYNGVPRNVETFN 314
R+ +A ++L ME G NV T+N
Sbjct: 341 RIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYN 400
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
LIS LC + + ++A++LF M E GC P+ T+ +I +
Sbjct: 401 SLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M +G N T+N L+S LC R DA L+ RM + G P+ T+ L+ +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E ++ D G+ Y + C +++++A + ++M ++ PD TY+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 421 LMTKWCAHNRVDKANALF 438
L+ C + RVD+A L
Sbjct: 121 LVNGLCKNGRVDEARMLI 138
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M + G PN T+ L+ L R+ + + +RM AGY+ Y L C +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+++A+ +F+ G PD TY+ L+ +C +++D+A + V
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 107
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ G+ + Y L+ LC R+ A +++E+M G++PD TY+ L+ +C
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 431 VDKANALFDEAVRNG 445
+D+A +FD AV+ G
Sbjct: 61 LDEALKIFDGAVKRG 75
>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
Length = 388
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + LI G C + D+A +L REM T+ YN +++ + + R
Sbjct: 116 PDVVTYNTLISGLCKLRRADDALQLMREMEPAP---NTITYNTVINGLWR-------SRK 165
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+EA+ +L +M G P +V T+N +I+NLC+ R E A+ +F M + C +E TF
Sbjct: 166 DTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFAT 225
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ + R+ + +D M AG K Y + L LC ++A +F M G
Sbjct: 226 LVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRG 285
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ P +Y++L+ C RV+ A LF E
Sbjct: 286 YAPTLVSYNVLLKGLCKALRVEHALVLFRE 315
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA--YNCILDCVSKLCRKKDPF 288
PD+ + LI + + D A+ L +M+ G G +A YN ++ ++C +
Sbjct: 44 PDEVTYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVR--- 100
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A+ +L M +G +V T+N LIS LCK+RR++DA++L M E PN T+
Sbjct: 101 ----KAKGILELMIDSGCKPDVVTYNTLISGLCKLRRADDALQL---MREMEPAPNTITY 153
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L+++ + E ++D M S G Y + LC +E+A+ VF M+
Sbjct: 154 NTVINGLWRSRKDTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRK 213
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
D T+ L+ + R++ A D R G+ K Y
Sbjct: 214 KKCEADEVTFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSY 258
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
V NV FN +++ + + A+ M + GC+P+E T+ LI ++ R
Sbjct: 6 AVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCNPDEVTYNTLIDVFHKLERFDSA 65
Query: 365 DEMIDRMKSAGY--AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E++++M +G + + Y + C + + +A + E M G PD TY+ L+
Sbjct: 66 RELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYNTLI 125
Query: 423 TKWCAHNRVDKANALFDE 440
+ C R D A L E
Sbjct: 126 SGLCKLRRADDALQLMRE 143
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 123/290 (42%), Gaps = 10/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S ID L + + T+ F +M G D + ++ LC + L+
Sbjct: 213 TSIIDSLCKDRQVTEAFNLFSKMVGQ-GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 271
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N +I PD I ++ C +GK+ EA + M G E V YN ++D C +
Sbjct: 272 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD---GHCLQS 328
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ EA KV M +NG NV ++N LI+ CKI+R + A LF M + PN
Sbjct: 329 EM----DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ L+ + R+ + + M + G Y L LC +++AM++ +
Sbjct: 385 VTYNTLMHXCH-VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 443
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ +PD + Y +++ C ++ A +F G+ + Y +
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 493
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 8/251 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G + D + ++ LC G A L E F P+ LI G C G + A
Sbjct: 134 GHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAA 193
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
RL R M +G + V Y I+D LC+ R +EA + M G+ ++ T
Sbjct: 194 IRLLRSMEQGNCQPDVVVYTSIID---SLCKD----RQVTEAFNLFSKMVGQGISPDIFT 246
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ LI +LC + + L +M P+ F ++ +L + ++ E +++D M
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + C +++A+ VF+ M +G+ P+ +Y+ L+ +C R+D
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366
Query: 433 KANALFDEAVR 443
KA LF+E +
Sbjct: 367 KATYLFEEMCQ 377
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 10/299 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L G+ L F++M + GF+ + + ++ LC+ G + A +L++
Sbjct: 141 TFTTLIRGLCVEGKIGDALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTNAAIRLLRS 199
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD + +I C D ++ EA L +M G Y ++ + LC
Sbjct: 200 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 259
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K +L M + + +V F+ ++ LCK + +A + M G P
Sbjct: 260 WK-------HVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 312
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ L+ + + E ++ D M GYA Y + C I+R+++A +F
Sbjct: 313 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 372
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
E+M P++ TY+ LM C R+ A ALF E V +G YR+ YL K
Sbjct: 373 EEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 430
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
TV +N +L ++K + F L ++ M+ G+P +V T N+LI++ C + R
Sbjct: 69 TVDFNRLLTSIAKTKQYPTVFSLSNQ-------MDSFGIPPDVYTLNILINSFCHLNRLG 121
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A + ++ + G P+ TF LI+ L ++G+ + D+M G+ Y +
Sbjct: 122 FAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLI 181
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
LC + A+ + M+ PD Y ++ C +V +A LF + V G+
Sbjct: 182 NGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS 241
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 116/329 (35%), Gaps = 87/329 (26%)
Query: 193 YGFKRDKDSLRLVVEKLCEN---GYA-SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGK 248
+G D +L +++ C G+A S K++K PD LI+G CV+GK
Sbjct: 98 FGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQ---PDTATFTTLIRGLCVEGK 154
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+ +A L +M GF+
Sbjct: 155 IGDALHLFDKMIGEGFQ------------------------------------------P 172
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV T+ LI+ LCK+ + AI+L M + C P+ + +I SL + +V E +
Sbjct: 173 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 232
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGI----------------------------------- 393
+M G + Y + LC +
Sbjct: 233 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKE 292
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+I +A V + M G P+ TY+ LM C + +D+A +FD V NG Y
Sbjct: 293 GKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 352
Query: 454 RVDPRYLKKPIAVKKGKKRETLPEKMARK 482
+ +++ K L E+M +K
Sbjct: 353 NT---LINGYCKIQRMDKATYLFEEMCQK 378
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 97/244 (39%), Gaps = 45/244 (18%)
Query: 158 KEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY 217
KE++ + + GR + F M +G D + R++++ LC+ +
Sbjct: 378 KELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVA-HGQIPDLATYRILLDYLCKKSHLDE 436
Query: 218 AEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A L+K + + PD +I ++I G C G+L+ A+ D
Sbjct: 437 AMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAAR----------------------D 474
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
S L K G+ NV T+ ++I+ LC+ ++A KLF M
Sbjct: 475 IFSNLSSK--------------------GLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
GC P+ T+ + + L Q +++ M + G++ + LC +++
Sbjct: 515 DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD-DKL 573
Query: 397 EQAM 400
+Q++
Sbjct: 574 DQSV 577
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P + FN L++++ K ++ L +M +G P+ T +LI S R+G
Sbjct: 66 PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFS 125
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ ++ G+ + + LC +I A+ +F+KM +G P+ TY L+ C
Sbjct: 126 VLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLC 185
Query: 427 AHNRVDKANA 436
+V NA
Sbjct: 186 ---KVGNTNA 192
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 124/290 (42%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + I+ + GR + L E M+ G K + + +V+ C G A L+ K
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLR-GCKPNVWTYNALVQGFCNEGKVHKAMALLNK 242
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD +LLI+G C+DG ++ A RL R M G YN + ++ LC+
Sbjct: 243 MRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNAL---INALCK 299
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R D +A + +E G+ N TFN LI+ LCK + + A K +M GC P
Sbjct: 300 DG---RTD-QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTP 355
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ I+ L + EG I M +Y + +L +
Sbjct: 356 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTW 415
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+M + G NPD TY M +C R+++A + E +NGV V Y
Sbjct: 416 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 465
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 14/256 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
GF +D S ++E CE G A +L + PD + L+KG C G+ +E
Sbjct: 76 GFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ---PDMHMYAALVKGLCKAGRGEEGL 132
Query: 254 RLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
+ R M G+ T AY ++D C R EAE++L +M G+ V
Sbjct: 133 LMLRRMKELGWRPSTRAYAAVVDFRCWE---------RKAKEAEEMLQEMFEKGLAPCVV 183
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T +I+ CK R DA+++ M GC PN T+ L++ +V + ++++M
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM 243
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ G Y + C IE A + M+ DG D TY+ L+ C R
Sbjct: 244 RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 303
Query: 432 DKANALFDEAVRNGVE 447
D+A +LFD G++
Sbjct: 304 DQACSLFDSLETRGIK 319
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A+ + L +AGR + L RM ++ G++ + VV+ C A AE+++++
Sbjct: 116 AALVKGLCKAGRGEEGLLMLRRM-KELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ + P C +I +C +G++ +A R+ M G + YN + V C +
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL---VQGFCNEG 231
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ A +L M GV + T+N+LI C E A +L M G ++
Sbjct: 232 KVHK----AMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 287
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI +L + R + + D +++ G + + LC +++ A EK
Sbjct: 288 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEK 347
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M + G PD+ TY + C + + E ++ V+ Y +
Sbjct: 348 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 397
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 11/228 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + LI G+C ++D A+ L +M GF V+Y +++ + R + L
Sbjct: 44 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVEL 103
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
E ++ + M + L+ LCK R E+ + + RM E G P+ +
Sbjct: 104 FGEMDQPDMHM-----------YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAA 152
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++ + E +EM+ M G A + C R+ A+ V E MK G
Sbjct: 153 VVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 212
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR 458
P+ TY+ L+ +C +V KA AL ++ GV Y + R
Sbjct: 213 CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIR 260
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 121/327 (37%), Gaps = 47/327 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVK 223
T + I+ L + GR Q F+ +E G K + + ++ LC++G A K L K
Sbjct: 289 TYNALINALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKVDIAWKFLEK 347
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL-------- 275
+ PD I+ C E EM + + TV Y ++
Sbjct: 348 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 407
Query: 276 ---------DCVSKLCRKKDPFRLDS-----------EAEKVLLDMEYNGVPRNVETFNV 315
+ VS C S EAE VL++M NGV + +N
Sbjct: 408 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 467
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL-----------------YQA 358
L+ I +++ A+ + +M PN+ T+ +L++ L ++A
Sbjct: 468 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 527
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + + D MK + Y L R E+A S+ MK D + + + Y
Sbjct: 528 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 587
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+T +C R A L +++G
Sbjct: 588 TALVTCFCKSKRYLDAWVLVCSMIQHG 614
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N +I +LC+ A++ M G P+ TF LI + +V ++ D+M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
G+A Y + C RI++A+ +F +M PD Y L+ C R
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGR 127
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +I+SL + A + + M +G+ + + C +++ A +F+KM
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
G D +Y L+ +C R+D+A LF E
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGE 106
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 170/429 (39%), Gaps = 60/429 (13%)
Query: 31 RFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLE-NLEADPLPISQRLHLI 89
+ S ++NF SK T N ++ D+P + + LE N ++ + + LH
Sbjct: 45 KISNEQFINFKSKTLPINSTPNTQS-DNPLE--------QFLEINCKSGDFTLHEALHFF 95
Query: 90 --FSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
H+ TP+L + FN+ A +S GR
Sbjct: 96 NQMIHMQTTPALSR---------------FNNLFGALAKKKQYLHVISMC----GRMNSI 136
Query: 148 KAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
+ +F+ N L +C+ + R V G R G++ + + +V+
Sbjct: 137 GLLKNFISLN-------ILLNCLCSVKRVFEGFVVFGMILRK----GYRPNTRTFTNLVK 185
Query: 208 KLCENGYASYAEKLVKDTANEIF---PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
LC G A ++ K +F P C +LI G C G A +L M G
Sbjct: 186 GLCLEGKIGEAVRVFKIMG--VFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNS 243
Query: 265 ELG------TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
+ G V+Y+CI+D LC+ L A++ ++M+ G+ NV T+ L+
Sbjct: 244 DFGINCKPTVVSYSCIID---SLCKDG----LVERAKEFFVEMKEKGIFPNVVTYTSLLH 296
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC E+A +LF M + G P+ TF VLI +L + +V E + D M
Sbjct: 297 GLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEP 356
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ Y + C +++ +F M D+ +Y +LM +C + V A L+
Sbjct: 357 STRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILY 416
Query: 439 DEAVRNGVE 447
E + G++
Sbjct: 417 REMMDRGIQ 425
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 138/360 (38%), Gaps = 63/360 (17%)
Query: 128 SHTDETLSFFTDYFGRRKDF---KAIHDF--LVDNKEVLGPKTLASCIDRLVRAGRPTQV 182
+ +D L F + + DF +A+H F ++ + + L + + V
Sbjct: 67 TQSDNPLEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHV 126
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCE-----NGYASYAEKLVKDTANEIFPDDKICD 237
+ RM G ++ SL +++ LC G+ + L K P+ +
Sbjct: 127 ISMCGRM-NSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYR----PNTRTFT 181
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+KG C++GK+ EA R+ + M G F+ CR
Sbjct: 182 NLVKGLCLEGKIGEAVRVFKIM--GVFD----------------CR-------------- 209
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM----GEWG--CHPNETTFLVL 351
P + T VLIS LC+ + +A+KL M ++G C P ++ +
Sbjct: 210 ---------PSAI-TCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCI 259
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I SL + V E MK G Y L LC E+A +F +M G
Sbjct: 260 IDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGL 319
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
PD T+ +L+ C +V +A+ LFD V+ VE + Y + V +GKK
Sbjct: 320 LPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKK 379
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 118/295 (40%), Gaps = 31/295 (10%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VD+ + T + I L + G+ + G F+ M + Y + + +++E C G
Sbjct: 314 MVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRY-VEPSTRTYNILIEGYCLAG 372
Query: 214 YASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY- 271
+K+ N+ D +L+K +C D ++ A L REM G + + Y
Sbjct: 373 MVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS 432
Query: 272 ---------------NCILDCVS---------KLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
+ +LD +S LC+ SEA V +E
Sbjct: 433 KVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNG----CVSEALDVFYGLENCKFA 488
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
NV FN LI+ +C+ + E A +LF R+ P+ T+ ++I L + + + ++
Sbjct: 489 SNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDL 548
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
M+ G A + + LC + + + KM +PD+ T ++M
Sbjct: 549 FLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVM 603
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 122/343 (35%), Gaps = 62/343 (18%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM---ERDYGF--KRDKDSLRLVVEKLCENGYASYA- 218
T I L R G L E M D+G K S +++ LC++G A
Sbjct: 214 TCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAK 273
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E V+ IFP+ L+ G C + +EAKRL EM G V ++ ++ +
Sbjct: 274 EFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGAL 333
Query: 279 SKLCRKKDPFRL----------------------------DSEAEKVLLDMEYNGVPRNV 310
K+ + K+ L E +K+ L M +
Sbjct: 334 CKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDA 393
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL--------------------- 349
++++L+ CK A+ L+ M + G P T+
Sbjct: 394 GSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDS 453
Query: 350 -------VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
V + L + V E ++ +++ +A + + +C E++E A +
Sbjct: 454 ISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWEL 513
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
F ++ + PD TY +++ C + KA LF E G
Sbjct: 514 FNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKG 556
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 206 VEKLCENGYASYAEKLVKDTANEIFPDD-KICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ LC+NG S A + N F + I + LI G C KL+ A L +
Sbjct: 463 LDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEAL 522
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ V Y + + LC+ P +A + L+ME G NV TFN L+ LC
Sbjct: 523 QPDVVTYTIM---IYGLCKVGQP----QKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNS 575
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
++L ++M P+ +T L+++ L +
Sbjct: 576 ERPKIVELLHKMAARKLSPDASTLLIVMDILLK 608
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 30/312 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L G+ + G + M R G ++++ LC+NG A ++ +
Sbjct: 222 TYGSLIRGLCGVGKFLEGFGLVDEMIRR-GLDVSVYVFTVLIDGLCKNGMLVEAREMFDE 280
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + P+ C L+ G+C+ G +D A+ L + GF+ YN + K+ R
Sbjct: 281 MVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGR 340
Query: 284 KKDPFRLDSE----------------------------AEKVLLDMEYNGVPRNVETFNV 315
+D R+ E A +++ M +G+ ++ T +
Sbjct: 341 VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCI 400
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ LCK +R + AI LF ++ E G P+ ++ +LI + R+GE ++ M
Sbjct: 401 LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 460
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC RI A + +M G PD+ TY +L+ +D+A
Sbjct: 461 LVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAV 520
Query: 436 ALFDEAVRNGVE 447
LF++ ++ G+E
Sbjct: 521 FLFNQMIKRGLE 532
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 130/313 (41%), Gaps = 15/313 (4%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDY-----GF--KRDKDSLR 203
HD +V+N L + I+ L GR + + +E++ GF K +
Sbjct: 130 HDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYS 189
Query: 204 LVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+V++ LC NG+ + + N + P++ LI+G C GK E L EM R
Sbjct: 190 IVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRR 249
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G ++ + ++D LC+ + EA ++ +M G N+ T L+ C
Sbjct: 250 GLDVSVYVFTVLID---GLCKNG----MLVEAREMFDEMVNRGYEPNIVTCTALMGGYCL 302
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ A +LF +GEWG + T+ V I + RV + + D M G
Sbjct: 303 KGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVT 362
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC + A + + M G PD T +L+ C R+D+A LF++ V
Sbjct: 363 YNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLV 422
Query: 443 RNGVEVKPKEYRV 455
+G+ Y +
Sbjct: 423 ESGLTPDVWSYTI 435
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 8/250 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLD 250
++GFKRD + + + C+ G A ++ + E + P+ + LI C G++
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
A + + M+R G V +LD LC+ K RLD +A + + +G+ +V
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLD---GLCKSK---RLD-QAILLFNQLVESGLTPDV 430
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
++ +LI C RR +A+ L M P+ T+ LI L ++ R+ +++
Sbjct: 431 WSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNE 490
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G Y L L + +++A+ +F +M G PD Y +++ +C R
Sbjct: 491 MHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSER 550
Query: 431 VDKANALFDE 440
+D+A LF E
Sbjct: 551 IDEAINLFRE 560
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 13/255 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
I + GR + F+ M R+ G + + +++ LC+ G S A ++VK +
Sbjct: 332 IHGYCKVGRVRDAVRVFDEMCRE-GVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKD 286
+ PD C +L+ G C +LD+A L ++ G +Y ++ C S
Sbjct: 391 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTS------- 443
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R EA +L DM + ++ T++ LI LC+ R +A +L M G P+
Sbjct: 444 --RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +L+ +L++ + E + ++M G Y + C ERI++A+++F +M
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561
Query: 407 KTDGHNPDSETYDLL 421
PD TY +L
Sbjct: 562 HMKNLVPDIVTYTIL 576
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 6/247 (2%)
Query: 213 GYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G+ S++ + + D + + ++KG CV+G + +A E+ GF L V+Y
Sbjct: 86 GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145
Query: 272 NCILDCVSKLCRKKDP---FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+++ + + R + R+ + ++ D + V NV ++++I LC+ ++
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFF--VKGNVVMYSIVIDCLCRNGFVDE 203
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+ + M G PNE T+ LI+ L + EG ++D M G + + +
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLID 263
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
LC + +A +F++M G+ P+ T LM +C VD A LFD G +
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKR 323
Query: 449 KPKEYRV 455
Y V
Sbjct: 324 DVWTYNV 330
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 14/288 (4%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
SC++ R G +VLG RDYG D + +++ LC+ G + A L+ D
Sbjct: 206 GSCMEN--RFGEAIRVLGKM----RDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMK 259
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N+ +FP+ ++L+ G C G L EA + M + YN ++ K R
Sbjct: 260 NKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIA 319
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ RL E E + L +V T+N LI+ + SE+ KL M G PN
Sbjct: 320 EAMRLREEMENLKLS-------PDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS 372
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ V++K + ++ E D+ + +M+ +G Y ++ C + ++++A + ++
Sbjct: 373 VTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDE 432
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
M G D T + ++ C ++D+A+ L A R G V Y
Sbjct: 433 MGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSY 480
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 137/311 (44%), Gaps = 30/311 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + +D L + GR + M ++ G ++ + ++V C G+ A +++
Sbjct: 234 TYNTILDGLCKKGRLNEARDLLLDM-KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIEL 292
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ N + PD +++I G+C G++ EA RL EM V YN +++ +
Sbjct: 293 MSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGS 352
Query: 284 KKDPFRLDSEAE----------------------------KVLLDMEYNGVPRNVETFNV 315
++ F+L E E K + ME +G ++ T+N
Sbjct: 353 SEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNT 412
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LIS CK+ + ++A +L MG G ++ T ++++L + ++ E +++ + G
Sbjct: 413 LISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRG 472
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + + Y + E+ QA+ ++++MK P TY+ ++ C + ++A
Sbjct: 473 YFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAI 532
Query: 436 ALFDEAVRNGV 446
DE + +G+
Sbjct: 533 DKLDELLESGL 543
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 123/317 (38%), Gaps = 45/317 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMER-------------------------------------D 192
I V GRP Q F RM+R
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190
Query: 193 YGFKRDKDSLRLVVEKLC-ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDE 251
G K + +S +++ C EN + L K PD+ + ++ G C G+L+E
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A+ L +M G +N + V CR EA V+ M N V +
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNIL---VVGCCR----LGWLKEAANVIELMSQNSVVPDAW 303
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+NV+IS CK R +A++L M P+ T+ LI ++ EG ++I+ M
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM 363
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ G Y + ++++ KM+ G PD TY+ L++ C ++
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423
Query: 432 DKANALFDEAVRNGVEV 448
D+A L DE R G+++
Sbjct: 424 DEAFRLMDEMGRKGLKM 440
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ G + E ME G K + + ++V+ + G +K V+
Sbjct: 339 TYNTLINGCFEHGSSEEGFKLIEEME-GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRK 397
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD + LI C GK+DEA RL EM R G ++ V N +L LCR
Sbjct: 398 MEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTML---RALCR 454
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ +LD EA +L G + ++ LI K ++ A++L+ M E P
Sbjct: 455 ER---KLD-EAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +I L Q + + + +D + +G + Y + C ++E+A
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH 570
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
KM PD T + L+ C ++KA LF+ + G +V Y
Sbjct: 571 NKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSY 620
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 100/204 (49%), Gaps = 4/204 (1%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
D+ I + G+ +A ++ M R G + + N +L+ + + RL ++
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRF-PSSHSIRL---SKA 183
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
V D GV N +FN+LI C R +AI++ +M ++GC P+ T+ ++ L
Sbjct: 184 VFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLC 243
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ R+ E +++ MK+ G + + + C + +++A +V E M + PD+
Sbjct: 244 KKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAW 303
Query: 417 TYDLLMTKWCAHNRVDKANALFDE 440
TY+++++ +C R+ +A L +E
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREE 327
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 126/303 (41%), Gaps = 9/303 (2%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G K+ + + + N V T I + GR + + E ME + D
Sbjct: 280 LGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEME-NLKLSPDVV 338
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++ E+G + KL+++ + P+ ++++K + GK+DE + R+M
Sbjct: 339 TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKM 398
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G V YN ++ K+ + + FRL E M G+ + T N ++
Sbjct: 399 EESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDE-------MGRKGLKMDDVTLNTMLRA 451
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LC+ R+ ++A L G +E ++ LI ++ + + + D MK
Sbjct: 452 LCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPS 511
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + LC + + QA+ +++ G PD TY+ ++ +C +V+KA +
Sbjct: 512 IITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHN 571
Query: 440 EAV 442
+ V
Sbjct: 572 KMV 574
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 7/191 (3%)
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA +VL M G P + T+N ++ LCK R +A L M G PN TTF +L
Sbjct: 214 GEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNIL 273
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ + + E +I+ M Y ++ C RI +AM + E+M+
Sbjct: 274 VVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKL 333
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+PD TY+ L+ H ++ L +E G++ Y V ++ VKKGK
Sbjct: 334 SPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWF-----VKKGKM 388
Query: 472 RETLPEKMARK 482
E +K RK
Sbjct: 389 DEV--DKTVRK 397
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 15/232 (6%)
Query: 135 SFFTDYFGRRKDFKAIH--DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
+ YF K +A+ D + + + + T S I L + G+ Q + + + +
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL-LE 540
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDE 251
G D+ + ++ C+ G A + + F PD C+ L+ G C +G L++
Sbjct: 541 SGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEK 600
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A +L G ++ V+YN I + LC++K R EA +L +ME + +
Sbjct: 601 ALKLFNTWISKGKDVDAVSYNTI---ILSLCKEK---RF-GEAFDLLEEMEEKKLGPDCY 653
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
T+N ++ L R +DA + ++ E G +E FL L K Q AR E
Sbjct: 654 TYNAILGGLTDAGRMKDAEEFISKIAEKG--KSENQFLELGKR--QDARTSE 701
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 109/282 (38%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I + G+ + + M R G K D +L ++ LC A L+
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRK-GLKMDDVTLNTMLRALCRERKLDEAHDLLCS 467
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
F D+ LI G+ K +A RL EM + YN + ++ LC+
Sbjct: 468 ARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSM---IAGLCQ 524
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + +K+ +E VP + T+N +I C+ + E A + +M E P
Sbjct: 525 MG---KTNQAIDKLDELLESGLVPDEI-TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKP 580
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T L+ L + + + ++ + S G + Y + LC +R +A +
Sbjct: 581 DVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLL 640
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
E+M+ PD TY+ ++ R+ A + G
Sbjct: 641 EEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 9/169 (5%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCK------IRRSEDAIKLFYRMGEWGCHPNET 346
+A ++ M+ G+ + T N L++ L + IR S+ F ++G N
Sbjct: 142 QAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIG---VKINTN 198
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+F +LI R GE ++ +M+ G Y L LC R+ +A + M
Sbjct: 199 SFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDM 258
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
K G P+ T+++L+ C + +A + + +N V Y V
Sbjct: 259 KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNV 307
>gi|226492862|ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
gi|194706478|gb|ACF87323.1| unknown [Zea mays]
gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein ZEAMMB73_571639 [Zea mays]
Length = 442
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 169/407 (41%), Gaps = 40/407 (9%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQ--NANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
S V TL+ R L F HW AN T TL+ D G+ +F L+
Sbjct: 36 SAVLKTLSLYANDWRRALDFFHWSASPAGANLPPTAATLARAVDILGKHFEFPLATSLLL 95
Query: 156 DNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ + P L + ++RL A L FE G D+ S ++V+ LC+
Sbjct: 96 SHHDPGDPTFLRPALRALLNRLAAANLIDDALHAFESTAASIGLC-DEVSFHILVDALCD 154
Query: 212 NGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ A+ L FP K +LL++GW ++L +M R G +
Sbjct: 155 HRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKAHAWARLRQLWFDMDRRGVAKDLHS 214
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y+ +D ++K P++ A KV +M+ G+ + +N I + + + A+
Sbjct: 215 YSIYMDALAK---SGKPWK----AFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAV 267
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+L+ +M + GC PN T+ +IK + R EG + +M+ G Y+ F L
Sbjct: 268 RLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQYL 327
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK-------------WCAHNRVDKA--- 434
R ++ + +FEKM G P +TY +L+ + W A +
Sbjct: 328 ---SRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDA 384
Query: 435 ---NALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET-LPE 477
NAL D ++ G+ ++Y D + L K ++ K K+ T LPE
Sbjct: 385 FAYNALIDALLQKGMVDLARKY--DEKMLAKGLSPKPRKELGTKLPE 429
>gi|194690470|gb|ACF79319.1| unknown [Zea mays]
Length = 671
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 159/385 (41%), Gaps = 24/385 (6%)
Query: 81 PISQRLHLIFSHVTPT--PSLVQSTLNFSPEAGRA--ILGFNHWLTQNANFSHTDETLSF 136
P + RL ++PT LV ++ + AGRA L F + + FS T +
Sbjct: 6 PWTTRLENSIRLLSPTLDAPLVHGVISGAASAGRADLALQFFRFAYRRGGFSPEGATFAL 65
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERD 192
R+ ++D TLA+ I RA P + + F RM +
Sbjct: 66 LVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLF-RMMPN 124
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDE 251
G R S V++ + G + A ++ A+ + PD + LI G+ + K++
Sbjct: 125 IGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMET 184
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A R+ +M G YN +L+ R D L+S A KV +M G RN
Sbjct: 185 AVRVFGDMKGHGVTPDVTTYNTLLNA---WVRAGD---LES-ARKVFDEMAGEGTERNSV 237
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ-AARVGEGDEMIDR 370
++NV+I + R E+A+ LF M E G +E TF L+ L RV E + +D
Sbjct: 238 SYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPGLCDDQGRVAEARKAVDD 297
Query: 371 MKSAGYAIGKKDYYEFL---TRLCGIERIEQAMSVFEKMKTDGHN-PDSETYDLLMTKWC 426
M A + KD FL T LC ++ A+ V K H D Y +LM C
Sbjct: 298 M--AERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLC 355
Query: 427 AHNRVDKANALFDEAVRNGVEVKPK 451
A + + A + DE + G + PK
Sbjct: 356 AGGKCETAIEVLDELMEKGTLLSPK 380
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 44/286 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT--AN 227
I AGR L FF R GF + + L+V L ++A LV DT +
Sbjct: 31 ISGAASAGRADLALQFFRFAYRRGGFSPEGATFALLVPALASRRMLNHARCLVLDTMPSF 90
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ PD+ LI + EA +L R M G ++YN +L + LCR ++
Sbjct: 91 SVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAI--LCRGREA 148
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
A ++ M +GV +V T+N LI ++ E A+++F M G P+ TT
Sbjct: 149 M-----ARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVTT 203
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ + +A GD +E A VF++M
Sbjct: 204 YNTLLNAWVRA-----GD------------------------------LESARKVFDEMA 228
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+G +S +Y++++ + NRV++A ALF E G+ + K +
Sbjct: 229 GEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTF 274
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 12/259 (4%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILDCVSKLCRKKDPFRL 290
D + +I G G+ D A + R YR GGF + ++ ++ R+
Sbjct: 23 DAPLVHGVISGAASAGRADLALQFFRFAYRRGGFSPEGATFALLVPALASR-------RM 75
Query: 291 DSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ A ++LD M V + T LIS + ++A+KLF M G ++
Sbjct: 76 LNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYN 135
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++K++ R + + M + G A Y + +++E A+ VF MK
Sbjct: 136 AVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGH 195
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
G PD TY+ L+ W ++ A +FDE G E Y V +K + +
Sbjct: 196 GVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNV---MIKGYVEGNRV 252
Query: 470 KKRETLPEKMARKRRRLKQ 488
++ L +MA K RL +
Sbjct: 253 EEAVALFAEMAEKGLRLSE 271
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 19/258 (7%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE---IFPDDKICDL-----LIKGWCVDGKLDEAKRL 255
+++E LC G A +++ + + + P + + +I+ C +G +A+
Sbjct: 349 VLMEGLCAGGKCETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFLCSNGSTAKAETF 408
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
R++ + G + A+N L R + A+++L M VP + E+ +
Sbjct: 409 FRQLMKKGVD-DKAAFN-------SLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHAL 460
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ + K DA M + G P+ F ++++L+ RV ++ M G
Sbjct: 461 LVDSFLKKNEPADAKTALDSMMQQGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEKG 520
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
++ L L +E+A+ M +G PD D L+ C + RV +A
Sbjct: 521 VTENMDVAHKILEALFTRGHVEEAIGRVNLMVENGCMPD---LDKLLVGLCDNGRVMEAQ 577
Query: 436 ALFDEAVRNGVEVKPKEY 453
L D A+ +V Y
Sbjct: 578 KLADFALDRDFDVSFSTY 595
>gi|357469235|ref|XP_003604902.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505957|gb|AES87099.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 449
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIK 241
L +ME D+ K D +V++ +C+ G EKL+KD + N I PD +I+
Sbjct: 125 LWVLRKME-DFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMKDMSLNGICPDLITYMTMIE 183
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS--EAEKVLL 299
G C G+L+EA + + M G +V + +LD LCR LDS A ++L
Sbjct: 184 GLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLD---GLCR------LDSMERALELLD 234
Query: 300 DMEYNG-VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ME +G NV T+ LI + CK +A+ + RM +GC N T LI+SL
Sbjct: 235 EMEKSGDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIESLCTE 294
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLT-RLCGIERIEQAMSVFEKMKTDGHNPDSET 417
RV E +++D++ + + + D Y L ++++E A ++F++M PD+
Sbjct: 295 GRVDEAYKVVDKL-VVEHCVSRGDCYNSLVISFIRVKKLEGAENLFKEMLAAEIKPDTLA 353
Query: 418 YDLLMTKWCAHNRVDKANALFD 439
LL+ + C +RV L D
Sbjct: 354 SSLLLKELCLKDRVLDGFYLLD 375
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 288 FRLDSEAE---KVLLDMEYNGVPRNVETFNVLISNLCKIRRSED-AIKLFYRMGEWGCHP 343
F +D E V+ E +G NV F ++ LCK + D + + +M ++ P
Sbjct: 80 FEIDKNPEIICDVIKAYEVDGCVVNVNMFREVL-KLCKEAENVDLGLWVLRKMEDFEMKP 138
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + V+IK + + V G++++ M G Y + LC R+E+A +
Sbjct: 139 DTVMYNVVIKLVCKQGDVEMGEKLMKDMSLNGICPDLITYMTMIEGLCSAGRLEEAYEMV 198
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ M+ +G +P+S ++ C + +++A L DE ++G
Sbjct: 199 KVMRGNGCSPNSVVLSAVLDGLCRLDSMERALELLDEMEKSG 240
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 17/283 (6%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL----VKDTANEIF 230
R G VL R + G + S +++ LC+ A A +L V +
Sbjct: 134 RVGEAMHVL---LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCS 190
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +++I G+ +G++D+A L EM G V YN I+D LC+ ++ R
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIID---GLCKAQEVDR- 243
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
AE V M GV N T+N +I LCK + + A +F +M + G P+ T+
Sbjct: 244 ---AEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNT 300
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L +A V + + +M G Y + LC + I++A VF++M G
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG 360
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
PD+ TY +++ C VD+A +F + + GV+ Y
Sbjct: 361 VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTY 403
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 40/321 (12%)
Query: 186 FERMERDYGFKRDKD--SLRLVVEKLC-----ENGYASYAEKLVKDTANEIFPDDKICDL 238
F RM RD K D + +V+ C E G+A++ L+ T + DD + +
Sbjct: 69 FNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFG--LILKTGWRV--DDIVVNQ 124
Query: 239 LIKGWCVDGKLDEAKR-LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL------- 290
L+KG C ++ EA L R+M G LG V+YN +L + R ++ L
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184
Query: 291 -------DSEAEKVLLDMEYN--------------GVPRNVETFNVLISNLCKIRRSEDA 329
D + ++++ +N GV +V T+N +I LCK + + A
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRA 244
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+F +M E G PN T+ +I L +A V + + +M G Y +
Sbjct: 245 EDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDG 304
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
LC + +++A VF++M G PD TY+ ++ C +DKA +F + + GV+
Sbjct: 305 LCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPD 364
Query: 450 PKEYRVDPRYLKKPIAVKKGK 470
Y + L K +V + +
Sbjct: 365 NLTYTIIIDGLCKAQSVDRAE 385
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 9/285 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK-DTANE 228
+D L + G+ + F+ M R G K +++ + G S L+ AN
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRK-GIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANG 500
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ +I + +I + +DE + +M + G V Y ++D + KL R D
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++ M GV N FN L+ LC + + E +LF M G P+ F
Sbjct: 561 LQFNQ-------MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ +L + RV E +ID M G Y + C R+++A+ + + M +
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G P+ +Y+ L+ +C R+D A LF E +R GV + Y
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETY 718
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 16/273 (5%)
Query: 184 GFFERMERD--------YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
GFF + D G D + +++ LC+ AE + + + + P++
Sbjct: 202 GFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ +I G C ++D A+ + ++M G + V YN I+D LC+ + R A
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIID---GLCKAQAVDR----A 314
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
E V M GV + T+N +I LCK + + A +F +M + G P+ T+ ++I
Sbjct: 315 EGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDG 374
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L +A V + + +M G Y + + E+ + ++M PD
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD 434
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY LL+ C + + ++A +LFD +R G++
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIK 467
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 21/289 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L +A + G F++M D G K D + +++ LC+ AE + +
Sbjct: 297 TYNTIIDGLCKAQAVDRAEGVFQQM-IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + PD+ ++I G C +D A+ + ++M G + YNC++
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIH------- 408
Query: 284 KKDPFRLDSEAEKVLL---DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ + E+V+ +M + + +V T+ +L+ LCK + +A LF M G
Sbjct: 409 ---GYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IE 397
P+ T + +++ + + E ++++ M + G + ++ F T +C + I+
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGIS---PNHRIFNTVICAYAKRAMID 522
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ M +F KMK G +P+ TY L+ C RVD A F++ + GV
Sbjct: 523 EVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGV 571
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 15/313 (4%)
Query: 148 KAIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
+ +H F+ ++ L P T + ID L + GR + F +M + G + +
Sbjct: 523 EVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINE-GVTPNNVVFNSL 581
Query: 206 VEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
V LC E+L + N+ I PD + ++ C +G++ EA+RL M G
Sbjct: 582 VYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGL 641
Query: 265 ELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
+ ++YN ++D C + R+D EA K+L M G+ N+ ++N L+ CK
Sbjct: 642 KPDVISYNTLIDGHCFAS--------RMD-EAVKLLDGMVSAGLKPNIVSYNTLLHGYCK 692
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
R ++A LF M G P T+ ++ L+++ R E E+ M +
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICT 752
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y L C ++A +F+ + + D T+++++ R + A LF
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIP 812
Query: 443 RNGVEVKPKEYRV 455
NG+ YR+
Sbjct: 813 ANGLVPSVVTYRL 825
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 12/302 (3%)
Query: 141 FGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
+G++ +HD L V N + + I + +V+ F +M++ G
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ-GLSP 538
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+ + +++ LC+ G A NE + P++ + + L+ G C K ++ + L
Sbjct: 539 NVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELF 598
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM G V +N +L LC++ EA +++ M G+ +V ++N L
Sbjct: 599 LEMLNQGIRPDIVFFNTVL---CNLCKEGRVM----EARRLIDSMVCMGLKPDVISYNTL 651
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I C R ++A+KL M G PN ++ L+ +A R+ + M G
Sbjct: 652 IDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGV 711
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
G + Y L L R +A ++ M TY +++ +C +N D+A
Sbjct: 712 TPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFK 771
Query: 437 LF 438
+F
Sbjct: 772 IF 773
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 29/259 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G K D S +++ C A KL+ + + P+ + L+ G+C G++D A
Sbjct: 640 GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNA 699
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP--------------------FRLDS 292
L REM R G G YN IL+ + + R + LD
Sbjct: 700 YCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDG 759
Query: 293 --------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
EA K+ + + ++ TFN++I L K R EDA+ LF + G P+
Sbjct: 760 FCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ ++ ++L + + E D + M+ +G A + +L I +A +
Sbjct: 820 VVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLS 879
Query: 405 KMKTDGHNPDSETYDLLMT 423
K+ + ++ T +L++
Sbjct: 880 KLDEKNFSLEASTTSMLIS 898
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 140/337 (41%), Gaps = 14/337 (4%)
Query: 132 ETLSFFTDYFG--RRKDF-KAIHDFLVDNKEVLGPKTL--ASCIDRLVRAGRPTQVLGFF 186
+T ++ + G R+ D A+ F KE P T+ ++ I+ L +GR +
Sbjct: 249 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI 308
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
M +G + + LC+ G A +L D N+ P+ LI G CV
Sbjct: 309 REMIL-HGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G L A L M R G TV YN +++ + + R K F VL M NG
Sbjct: 368 SGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF-------VVLNLMGRNG 420
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
N+ T+N +I C + + A+ + M + G N T+ +IK +
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++D M+ G + Y E + C I ++E A +F +M DG P+ TY L+ +
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
C ++D A +L + R+G + Y V L K
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 32/331 (9%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
D L + +G ++ + L R G V+ + RM + G + + V+ LC+
Sbjct: 169 DMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-GVQPNLLIYNAVINALCK 227
Query: 212 NGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+G + AE ++K +E+ PD +I G C LD A ++ +M + G E TV
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 271 YNCILDCVSKLCRKKDPFRLDSE----------------------------AEKVLLDME 302
Y+ +++ + R + F L E A ++ +DM+
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G NV T+ LIS LC + AI LF+RM G PN T+ LI L + R+
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+++ M G + Y E + C + ++AM V M GH+ + TY+ ++
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+C A + D +R+G KP E+
Sbjct: 468 KGYCDSGNTTSALRILD-LMRDG-GCKPDEW 496
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
+G T L + M RD G K D+ S ++ C+ A L + ++ + P++
Sbjct: 473 SGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
LI G+C D KLD A L M R G YN ++ ++K ++ F E
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK----QNNFSGAEEL 587
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
KV+++ G+ NV T+ +I LCK + A+++F +M E GC PN T+ LI++
Sbjct: 588 CKVMIE---EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L Q +V E + + ++ G + Y + + ++E A + +M G P
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704
Query: 415 SETYDLLM 422
TY +L+
Sbjct: 705 LWTYGVLI 712
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 26/300 (8%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
+ A+ + LV+N+ + K ++ + R G ++ + E M + Y D LV+
Sbjct: 393 YNALINILVENRRI---KYAFVVLNLMGRNGCSPNIVTYNE-MIKGYCILGDPKKAMLVM 448
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ + G+++ LV T N I IKG+C G A R+ M GG +
Sbjct: 449 NNMLQRGHSA---NLV--TYNTI----------IKGYCDSGNTTSALRILDLMRDGGCKP 493
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+Y ++ K+ + + F L +E M +G+ N T+ LI CK +
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNE-------MVDDGLCPNEVTYTALIDGYCKDEKL 546
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+ A L M GC PN T+ VLI L + +E+ M G Y
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LC A+ +F KM G P+ TY L+ +V++A LF E R+G+
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 205 VVEKLCENGYASYAEK---LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ C++G + A + L++D + PD+ LI G+C K++ A L EM
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCK--PDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G V Y ++D C+ + +LD+ A +L M+ +G NV+T+NVLI L
Sbjct: 524 DGLCPNEVTYTALID---GYCKDE---KLDT-ATSLLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K A +L M E G PN T+ +I L + EM ++M G +
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG-CLPNL 635
Query: 382 DYYEFLTRLCGIE-RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L R G E ++E+A ++F +++ G PD TY ++ + +V+ A
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 441 AVRNGVEVKPKEYRVDPRYLKK 462
++ G + Y V + LK
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKN 717
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 118/326 (36%), Gaps = 33/326 (10%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VD+ T + ID + + E M+R G + + + +++ L +
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS-GCRPNVQTYNVLIHGLTKQN 579
Query: 214 YASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
S AE+L K E IFP+ +I G C +G + LA EM+ E G +
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG----STSLALEMFNKMIEQGCLPN- 634
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
L S L R EAE + ++E +G+ + T+ +I + E A
Sbjct: 635 --LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692
Query: 333 FYRMGEWGCHPNETTFLVLIKSL------------------------YQAARVGEGDEMI 368
RM + GC P T+ VLIK L YQ M
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMS 752
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
++ + + ++ L R +A + M + G PD E Y+ L+
Sbjct: 753 AKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 812
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYR 454
VD A +F G EV Y+
Sbjct: 813 RNVDLAMGVFKHMSTQGCEVHLNGYK 838
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 299 LDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
LDM +G+ + ++ L+ +L ++ + + ++RM G PN + +I +L +
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
V + + ++ ++ + + Y + C ++ A+ VF +M +G P++ T
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y L+ C RV++A L E + +G+
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGI 316
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 121/328 (36%), Gaps = 48/328 (14%)
Query: 119 HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGR 178
H LT+ NFS +E + + I +V T + ID L + G
Sbjct: 573 HGLTKQNNFSGAEELCKVMIE--------EGIFPNVV---------TYTAMIDGLCKNGS 615
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICD 237
+ L F +M + G + + ++ L + G AE L + + + PD+
Sbjct: 616 TSLALEMFNKM-IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+I+ + + GK++ A M + G + Y ++ + K+ + L +
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------KNEYLLADQRLAA 728
Query: 298 LLDMEYNGV-----------------------PRNVETFNVLISNLCKIRRSEDAIKLFY 334
L D+ N +V+ N L+SNL R +A +L
Sbjct: 729 LPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLG 788
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M G P++ + L+ SL + V + M + G + Y E + LC +
Sbjct: 789 SMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLH 848
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLM 422
R ++A FE M NPD +L+
Sbjct: 849 RRKEARITFENMLMRTWNPDDVVQAVLI 876
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 32/260 (12%)
Query: 205 VVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+NG S A E K P+ LI+ +GK++EA+ L E+ R G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL--- 320
+ Y +++ + + F L M G + T+ VLI L
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNF-------LGRMIKAGCQPTLWTYGVLIKGLKNE 718
Query: 321 -----------------CKI---RRSEDAIKLF-YRMGEWGCHPNETTFLVLIKSLYQAA 359
C +DA+ + ++ E + L+ +L A
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R E +E++ M S G ++ Y L L + ++ AM VF+ M T G Y
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838
Query: 420 LLMTKWCAHNRVDKANALFD 439
L+ C +R +A F+
Sbjct: 839 ELICALCQLHRRKEARITFE 858
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 7/218 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I+PD C+ ++ G C G EA L + GF L +YN I + KLC++ P
Sbjct: 562 IWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAI---IYKLCKEGYPE 618
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A ++L M V +V ++ LIS K + A+ LF RM + G N T+
Sbjct: 619 R----ALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATY 674
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ + ++ E + MK G + + Y + C +++A ++FE+M
Sbjct: 675 TILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSR 734
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+G +P+ TY ++ +C NR+D A +FD+ R+ V
Sbjct: 735 EGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSV 772
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 109/280 (38%), Gaps = 11/280 (3%)
Query: 148 KAIHDFLVDNKEVLGPKTLAS--CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
+A+ F ++ + P T+A +D RAG + L E + ++GF + S +
Sbjct: 549 QALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQ-EHGFNLNPHSYNAI 607
Query: 206 VEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ KLC+ GY A E L + + P LI G+ A L M + G
Sbjct: 608 IYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGI 667
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
Y ++ S + EA + +M+ G+ + ++ LI C R
Sbjct: 668 TFNIATYTILMSIFSHSHKMH-------EAYGIFKEMKERGLCLDQISYTTLIVGFCNNR 720
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ A LF M GC PN T+ +I ++ R+ + D+M Y
Sbjct: 721 EMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYT 780
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ +QA +++ MK G PD T+++L K
Sbjct: 781 VLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVLGLK 820
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 103/250 (41%), Gaps = 10/250 (4%)
Query: 206 VEKLCENGYASYAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+ LC+ G A L+++ N+ D+ I G+C G++ EA ++ EM G
Sbjct: 363 IHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDV-IYGFCKRGEVFEALQVLEEMKSSG 421
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+Y+ + ++ C K D + E +ME++ + ++ ++ LI LCK
Sbjct: 422 ILPDVYSYSIL---INAFCGKGDVMKCLDLME----EMEHSQIKPSIVSYTSLIHGLCKK 474
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
++A+ +F+ +G C + T + LI + ++++ M
Sbjct: 475 NMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSC 534
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ + +QA+ VF M DG PD+ + ++ C +A L ++
Sbjct: 535 RSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQE 594
Query: 444 NGVEVKPKEY 453
+G + P Y
Sbjct: 595 HGFNLNPHSY 604
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 97/228 (42%), Gaps = 15/228 (6%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAR----EMYRGGFELGTVAYNCILDCVSKLCRKKD 286
P+ +++ +C D D R A ++YR G + V Y+ + LC+ +
Sbjct: 315 PNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTY---IHGLCKVGN 371
Query: 287 PFRLDSEAEKVLL-DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
EA +L+ ++ Y P N +FN +I CK +A+++ M G P+
Sbjct: 372 V-----EAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDV 426
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
++ +LI + V + ++++ M+ + Y + LC ++ A+ +F
Sbjct: 427 YSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHS 486
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ DS Y+ L+ +C +D A L +E + N E+ P +
Sbjct: 487 IGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICN--ELVPTAF 532
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 135/317 (42%), Gaps = 44/317 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + + L A R L E+ME G + DKD+ L++ LC++G A+ LV +
Sbjct: 89 TYSILVAALTAAKRNNDALELLEQME-SVGLEADKDTYSLIIHSLCKSGMVDKAKVLVER 147
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE------------------------- 258
+ PD +I D +I+ G++DEA +A+E
Sbjct: 148 MISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEADAKHCTSVVTYNSLVLGFLKARRL 207
Query: 259 ---------MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
M R G YN + + +S+ +R A K+L M +GV +
Sbjct: 208 KRGIKVFTRMARTGPSPDIYTYNILFEGLSR----HGLWRF---AYKLLPRMNQDGVLPD 260
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V TFN LI+ L + R A+ L M GC PN T+ +L+K L + AR E E+
Sbjct: 261 VVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARTDECVELFQ 320
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM-KTDGHNPDSETYDLLMTKWCAH 428
R+ A Y ++ LC R++QA +F M +D P++ TY L+ C
Sbjct: 321 RLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLK 380
Query: 429 NRVDKANALFDEAVRNG 445
+++A L D + G
Sbjct: 381 MELERAVLLLDAMAKRG 397
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 10/257 (3%)
Query: 156 DNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
D K T S + ++A R + + F RM R G D + ++ E L +G
Sbjct: 184 DAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMART-GPSPDIYTYNILFEGLSRHGLW 242
Query: 216 SYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
+A KL+ + + + PD + LI G D + A L +EM G + + Y +
Sbjct: 243 RFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTIL 302
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
L +++ R + L LLD + + NV T+N ++S LCK R + A +LF
Sbjct: 303 LKWLARNARTDECVELFQR----LLDRK---LAPNVYTYNTVMSALCKAGRLDQAHRLFG 355
Query: 335 RMGEWGCHP-NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
M C P N T+ LI L + ++D M G A Y + C
Sbjct: 356 VMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAFCKQ 415
Query: 394 ERIEQAMSVFEKMKTDG 410
RI++A + E+M G
Sbjct: 416 GRIDEAFELLERMPFAG 432
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 116/310 (37%), Gaps = 44/310 (14%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+ +N L + L C+ L +AG L F + + + + ++V L
Sbjct: 42 MAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAK 101
Query: 214 YASYAEKLVKDTANEIFPDDK-ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ A +L++ + DK L+I C G +D+AK L M Y+
Sbjct: 102 RNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYD 161
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+++ +SK R + + EA D ++ +V T+N L+ K RR + IK+
Sbjct: 162 PVIEELSKTGRVDEAVEIAKEA-----DAKH---CTSVVTYNSLVLGFLKARRLKRGIKV 213
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F RM G P+ T+ +L + L + + F
Sbjct: 214 FTRMARTGPSPDIYTYNILFEGL-----------------------SRHGLWRF------ 244
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
A + +M DG PD T++ L+ NR +A L E V G +
Sbjct: 245 ------AYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAIT 298
Query: 453 YRVDPRYLKK 462
Y + ++L +
Sbjct: 299 YTILLKWLAR 308
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM-GEWGCHPNETTFLVLIKS 354
++L DM NG +++ N + LCK + A++ + + +T+ +L+ +
Sbjct: 37 ELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAA 96
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L A R + E++++M+S G K Y + LC +++A + E+M + PD
Sbjct: 97 LTAAKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPD 156
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEA 441
+ YD ++ + RVD+A + EA
Sbjct: 157 ARIYDPVIEELSKTGRVDEAVEIAKEA 183
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 10/294 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ ++ PD +I G+C +G +DEA L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G + TV+Y +L + R D AE+++ M G P N TFN L
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-------AEELMSQMIQQGCPPNPVTFNTL 467
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y L R+ + + +F+ +K D+ Y+ +++ C D+A
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIR 490
F V NG Y + + L K+ + E L E +R R +R
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ--ELLSELCSRGALRKHLMR 639
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 123/270 (45%), Gaps = 14/270 (5%)
Query: 184 GFFERMER------DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC- 236
G FER+ ++G D +++ +C+ G+ A +++ + + +C
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ ++KG C + EA+ L EM++ L V +N ++D C+ L +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD---FFCQNG----LVDRVIE 377
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M +G +V T+ +I+ CK ++A+ L M GC PN ++ +++K L
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
A R + +E++ +M G + + LC +EQA+ + ++M +G +PD
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+Y ++ + ++A L + V G+
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 24/252 (9%)
Query: 203 RLVVEKLCENG---------YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
+++E C +G A +A+ DT N C+L++ C G +DEA
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGN--------CNLVLNAICEQGCVDEAV 201
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L R++ G E V+YN +L LC K + E+++ +M N+ TF
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLK---GLCMAKRW----GDVEELMDEMVRVDCAPNIVTF 254
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LI LC+ E ++ +M E GC P+ + +I + + + +E+++RM S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y L LC ER ++A + +M D T+++L+ +C + VD+
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 434 ANALFDEAVRNG 445
L ++ + +G
Sbjct: 375 VIELLEQMLSHG 386
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 122/308 (39%), Gaps = 35/308 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D + LV+ +CE G A L++ A D + + ++KG C+ + +
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV 235
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD------SE------------- 293
+ L EM R V +N + + LCR R+ SE
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTL---IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292
Query: 294 ------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
A ++L M G+ NV +N ++ LC R ++A +L M + C
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
++ TF +L+ Q V E++++M S G Y + C I++A+
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ + M + G P++ +Y +++ C+ R A L + ++ G P + +L
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Query: 462 KPIAVKKG 469
K V++
Sbjct: 473 KKGLVEQA 480
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+++G C G++ +A + EM G Y+ IL+ CR FR + +VL
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILE---AACRSGG-FR---NSVRVL 169
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G + N++++ +C+ ++A+ L ++ +GC + ++ ++K L A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R G+ +E++D M A + + LC E+ V +M G PD Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEK 478
++ C ++ AN + + G++ Y LK + ++ K+ E L +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT---VLKGLCSAERWKEAEELLSE 346
Query: 479 MARKRRRLKQIRLSFV 494
M +K L + + +
Sbjct: 347 MFQKDCPLDDVTFNIL 362
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 148/365 (40%), Gaps = 15/365 (4%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQ----NANFSHTDETLSFFTDYFGRRKDFKAIHDF 153
+LV + L+ A R F W + F+HT T G+ + F+++
Sbjct: 184 TLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVAL 243
Query: 154 L--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ + + L I AG +G FE M R +GF +S ++ L +
Sbjct: 244 IQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMM-RTHGFDDGVESFNCLLVALAQ 302
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G A ++ + PD + L+ WC L EA R+ EM G + V +
Sbjct: 303 EGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVH 362
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N +++ + + R+ EA K+ M+ G NV T+ +LI + CK + + A++
Sbjct: 363 NTMIEGLLRGQRR-------PEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMR 415
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
F M + GC P+ T+ L+ A R+ +++ M G + Y + L
Sbjct: 416 CFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLT 475
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR-VDKANALFDEAVRNGVEVKP 450
+ A +++KM G P TY+++M + R A+++E R G+
Sbjct: 476 NRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDV 535
Query: 451 KEYRV 455
Y V
Sbjct: 536 NSYTV 540
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 18/266 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+ IK + G++ A + M GF+ G ++NC+L +++ L EA +V
Sbjct: 260 IAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQE-------GLGREANQV 312
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M P ++ ++ L+ C R +A +++ M E G P+ +I+ L +
Sbjct: 313 FDRMRDRYAP-DLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR 371
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
R E +M + MK+ G A Y + C +++ AM FE+M+ G PD T
Sbjct: 372 GQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVAT 431
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPE 477
Y L+ + R+D+ AL +E + G + Y A+ K +P+
Sbjct: 432 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYN----------ALIKLLTNRNMPD 481
Query: 478 KMARKRRRLKQIRLSFVKKPKRMMMR 503
AR +++ + L MMM+
Sbjct: 482 DAARIYKKMIKKGLEPTIHTYNMMMK 507
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L + + L + G+ + + + R+ + GF + + ++ LC+ G A +L+K
Sbjct: 526 LTTLVGGLCKEGKHSDAVELWFRL-LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 584
Query: 226 ANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
F DKI + LI G C +GK++E +L EM + G E T YN ++ + ++ +
Sbjct: 585 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 644
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ L +E + L VP NV T+ V+I CK + E+ KLF + N
Sbjct: 645 DEAVNLWNECKSRDL------VP-NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 697
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ LI++ + E ++ D M+S G Y + +C I R+E A + +
Sbjct: 698 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 757
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+M+ +G P+ Y L+ +C ++DK + E
Sbjct: 758 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 793
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 9/307 (2%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G+ + + I + ++ + P + I L R L F M + +
Sbjct: 466 IGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR-NMRPNDG 524
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREM 259
L +V LC+ G S A +L + F + + + LI G C G + EA RL ++M
Sbjct: 525 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 584
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
GF L + YN ++ K + ++ F+L E K G+ + T+N+LI
Sbjct: 585 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK-------QGIEPDTFTYNLLIHG 637
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+C+I + ++A+ L+ PN T+ V+I +A ++ EG+++ + + +
Sbjct: 638 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 697
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + C +A + + M++ G P + TY L+ C R++ A L D
Sbjct: 698 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 757
Query: 440 EAVRNGV 446
E + G+
Sbjct: 758 EMRKEGL 764
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
E +E+ GF ++ +++ C+ G A ++ D ++ I P+ + +I+G+C
Sbjct: 408 ETLEK--GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 465
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G++++A+ + EM GF + A+ I + LC R +S A + L +M
Sbjct: 466 IGQMEQAECILEEMLSRGFSINPGAFTTI---IHWLCMNS---RFES-ALRFLREMLLRN 518
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ N L+ LCK + DA++L++R+ E G N T LI L + + E
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ +M G+ + K Y ++ C ++E+ + +M G PD+ TY+LL+
Sbjct: 579 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 638
Query: 426 CAHNRVDKANALFDEA 441
C ++D+A L++E
Sbjct: 639 CRIGKLDEAVNLWNEC 654
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D + L++ +C G A L + + ++ P+ ++I G+C K++E
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++L E+ EL +V YN + + CR + EA K+ DM G+P T
Sbjct: 683 EKLFTELLTQNLELNSVVYNTL---IRAYCRNGNTV----EAFKLHDDMRSKGIPPTTAT 735
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LI +C I R EDA L M + G PN + LI + ++ + ++ M
Sbjct: 736 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 795
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S K Y + ++ A + +M G PD+ TY++L +C +++
Sbjct: 796 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Query: 433 KANALFDEAV 442
+ L ++ V
Sbjct: 856 EGKLLAEDGV 865
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 10/298 (3%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ FL + KT + LV+A + FE M + G D +
Sbjct: 265 GVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ--GVSPDVYLFSTAINA 322
Query: 209 LCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
C+ G A +L D + P+ + LI G C G LDEA R +M + G
Sbjct: 323 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 382
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ Y+ +++ + KL + F +EA VL + G N +N LI CK+
Sbjct: 383 LITYSVLINGLMKL----EKF---NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 435
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
DA+++ M G +PN T +I+ + ++ + + +++ M S G++I + +
Sbjct: 436 DALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 495
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
LC R E A+ +M P+ L+ C + A L+ + G
Sbjct: 496 HWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 553
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FP K C L+ +L+++ + M R G ++ ++ K + +D
Sbjct: 275 VFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAI 333
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L DME GV NV T+N LI LCK ++A + +M + G + T+
Sbjct: 334 QL-------FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITY 386
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VLI L + + E + ++ G+ + Y + C + + A+ + M +
Sbjct: 387 SVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVS 446
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
G NP+S T + ++ +C ++++A + +E + G + P + +L
Sbjct: 447 KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 498
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 310 VETFNVLISNLCKIRRS---EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
V ++LI C R+ +AI +F + G P T L+ SL +A + +
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRL---CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ + M+ D Y F T + C ++E A+ +F M+ G +P+ TY+ L+
Sbjct: 301 VFETMRQGV----SPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIH 356
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C H +D+A ++ V++GV Y V
Sbjct: 357 GLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 388
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
GR +D K + D + KE L P + + I + G+ +V+ + M Y +
Sbjct: 746 IGRMEDAKCLIDEM--RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS-SYDIHPN 802
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
K + ++++ ++G A KL+ + + I PD ++L G+C +GK++E K LA
Sbjct: 803 KITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE 862
Query: 258 E 258
+
Sbjct: 863 D 863
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 9/288 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
LVD G + + I+ L + G L +ME + K ++++LC++G
Sbjct: 32 LVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETH-IKAHVVIYNAIIDRLCKDG 90
Query: 214 YASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ +A+ L + ++ IFPD +I +C G+ +A++L R+M V ++
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+++ + K + SEAE++ DM G+ T+N +I CK R DA ++
Sbjct: 151 ALINALVKEGKV-------SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM 203
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M C P+ TF LI +A RV G E+ M G Y + C
Sbjct: 204 LDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 263
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ ++ A + M + G P+ T+ ++ C+ + KA A+ ++
Sbjct: 264 VGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILED 311
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 12/250 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
IDRL + G F M D G D + +++ C +G + AE+L++D +
Sbjct: 83 IDRLCKDGHHIHAQNLFTEM-HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI +GK+ EA+ + +M R G T+ YN ++D K R D
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 289 R-LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
R LDS A K +V TF+ LI+ CK +R ++ +++F M G N T
Sbjct: 202 RMLDSMASK--------SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 253
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM- 406
+ LI Q + ++++ M S+G A + L LC + + +A ++ E +
Sbjct: 254 YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Query: 407 KTDGHNPDSE 416
K++GH+ + E
Sbjct: 314 KSEGHHLEDE 323
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 7/215 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C G + A L +M + V YN I+D +LC KD + A+ +
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID---RLC--KDGHHI--HAQNLF 99
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G+ +V T++ +I + C+ R DA +L M E +P+ TF LI +L +
Sbjct: 100 TEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKE 159
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+V E +E+ M G Y + C +R+ A + + M + +PD T+
Sbjct: 160 GKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
L+ +C RVD +F E R G+ Y
Sbjct: 220 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 254
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 21/287 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD----YGFKRDKDSLRLVVEKLCENGYASYAEK 220
T + ++ L GR Q L +RM + YG ++ LC+ G A
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYG---------TIINGLCKMGDTESALN 62
Query: 221 LV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L+ K I I + +I C DG A+ L EM+ G + Y+ ++D
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+ R D AE++L DM + +V TF+ LI+ L K + +A +++ M
Sbjct: 123 RSGRWTD-------AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P T+ +I + R+ + M+D M S + + + C +R++
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M +F +M G ++ TY L+ +C +D A L + + +GV
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E GC P+ TF L+ L RV + ++DRM G+ + Y + LC +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGD 56
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E A+++ KM+ Y+ ++ + C A LF E G+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI 107
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 4/142 (2%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G +V TF L++ LC R A+ L RM E G P T +I L +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGT----IINGLCKMGD 56
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
++ +M+ Y + RLC A ++F +M G PD TY
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 421 LMTKWCAHNRVDKANALFDEAV 442
++ +C R A L + +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMI 138
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 9/265 (3%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
R G +VL + + + G K D+ ++ LC+NG AE+L++ +FPD+
Sbjct: 289 RIGELDKVLKLVDEL-KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ +I G+C G + A +L EM R V Y ++ + K + E
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKM-------VE 400
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A ++ +M G+ + T+ LI CK ++A + +M + G PN T+ L
Sbjct: 401 AREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD 460
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L + + +E++ M G Y + LC I IEQ + + E+M G P
Sbjct: 461 GLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP 520
Query: 414 DSETYDLLMTKWCAHNRVDKANALF 438
D+ TY LM +C + KA+ L
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELL 545
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 115/258 (44%), Gaps = 10/258 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLD 250
+ G + S +V+ LC+ G A L V+ T FPD +++ G+C G+LD
Sbjct: 235 ELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELD 294
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV-PRN 309
+ +L E+ G + YN I + LC+ + EAE++L M GV P N
Sbjct: 295 KVLKLVDELKGKGLKPDEYIYNNI---ILLLCKNGEVV----EAEQLLRGMRKWGVFPDN 347
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V + +IS CK+ A KLF M P+ T+ +I + ++ ++ E EM +
Sbjct: 348 V-VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M G + Y + C +++A SV +M G P+ TY L C +
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG 466
Query: 430 RVDKANALFDEAVRNGVE 447
+D AN L E R G++
Sbjct: 467 EIDVANELLHEMSRKGLQ 484
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID +AG + +M + G + + + + LC+NG A +L+ +
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQK-GLTPNVVTYTALADGLCKNGEIDVANELLHE 477
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + + P+ + ++ G C G +++ +L EM GF T+ Y ++D K+
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++A ++L M + + TFNVL++ C ED +L M E G P
Sbjct: 538 M-------AKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMP 590
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TTF L+K + E+ M G Y + C +++A +
Sbjct: 591 NATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLH 650
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++M G++ + TYD L+ + + +A LF+E ++G+ + Y +
Sbjct: 651 KEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDI 702
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 116/284 (40%), Gaps = 13/284 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K+ ++H+ +V T + D L + G M R G + + +
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK-GLQPNVYT 489
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+V LC+ G KL+++ +PD L+ +C G++ +A L R M
Sbjct: 490 YNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIML 549
Query: 261 RGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
+ V +N +++ C+S + + E+++ M G+ N TFN L+
Sbjct: 550 NKRLQPTLVTFNVLMNGFCMSGMLE---------DGERLIEWMLEKGIMPNATTFNSLMK 600
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C +++ M + G P+ T+ +LIK +A + E + M GY++
Sbjct: 601 QYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSV 660
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y + ++ +A +FE+M+ G + + YD+ +
Sbjct: 661 TAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ DL + +G + EA++L ++ R G + + N L S+L + ++ A
Sbjct: 173 VFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFL---SRLSCNFEGIKI---A 226
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
KV + GV N + N+++ LC++ + +A L +M + G P+ +
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVS---YGVV 283
Query: 355 LYQAARVGEGDE---MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ R+GE D+ ++D +K G + Y + LC + +A + M+ G
Sbjct: 284 VSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGV 343
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD+ Y +++ +C V A LFDE R +
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKI 378
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ ++ ++ R G +V E M+R G K + ++ LC + AE+ +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I PD + LI G+C G + A + EM+ + Y I +S C+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI---ISGFCQ 398
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D EA K+ +M G+ + TF LI+ CK +DA ++ M + GC P
Sbjct: 399 IGDMV----EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L + + +E++ M G Y + LC IE+A+ +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ + G N D+ TY LM +C +DKA + E + G++
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 9/281 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
S I L R + + F M R G D +++ C+ G A K +
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ +I PD +I G+C G + EA +L EM+ G E +V + +++ K K
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D FR+ + M G NV T+ LI LCK + A +L + M + G PN
Sbjct: 439 DAFRVHNH-------MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ ++ L ++ + E +++ ++AG Y + C +++A + ++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M G P T+++LM +C H ++ L + + G+
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 133/321 (41%), Gaps = 12/321 (3%)
Query: 139 DYFGRRKDFKAIHDFLVD-NKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGF 195
D F +R D +A F + + + P L + I + G + F M G
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GL 417
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKR 254
+ D + ++ C+ G+ A ++ P+ LI G C +G LD A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L EM++ G + YN I V+ LC+ + EA K++ + E G+ + T+
Sbjct: 478 LLHEMWKIGLQPNIFTYNSI---VNGLCKSGNI----EEAVKLVGEFEAAGLNADTVTYT 530
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L+ CK + A ++ M G P TF VL+ + +G+++++ M +
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G A + + + C ++ A ++++ M + G PD +TY+ L+ C + +A
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 435 NALFDEAVRNGVEVKPKEYRV 455
LF E G V Y V
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSV 671
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 18/276 (6%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+ G A +L+ + + P+ + ++ G C G ++EA +L E G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
TV Y ++D C+ + +A+++L +M G+ + TFNVL++ C
Sbjct: 522 LNADTVTYTTLMD---AYCKSGEM----DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
ED KL M G PN TTF L+K + + M S G K Y
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C +++A +F++MK G + TY +L+ + + +A +FD+ R
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 444 NGVEVKPK--EYRVDPRYLKKPIAVKKGKKRETLPE 477
G+ + ++ D +Y KGK+ +T+ +
Sbjct: 695 EGLAADKEIFDFFSDTKY--------KGKRPDTIVD 722
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 125/306 (40%), Gaps = 13/306 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G KD +H+ ++ T + ID L + G M + G + + +
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFT 493
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+V LC++G A KLV + A + D L+ +C G++D+A+ + +EM
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 261 RGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
G + V +N +++ C+ + + EK+L M G+ N TFN L+
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLE---------DGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + A ++ M G P+ T+ L+K +A + E + MK G+++
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + ++ +A VF++M+ +G D E +D R D
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPI 724
Query: 439 DEAVRN 444
DE + N
Sbjct: 725 DEIIEN 730
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D ++ D+ + G L EA+R+ +M G L + N L +SK C K
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT------ 227
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ A V + GV NV ++N++I +C++ R ++A L M G P+ ++ +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 352 IKSLYQAARVGEGD---EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+ R GE D ++I+ MK G Y + LC I ++ +A F +M
Sbjct: 288 VNGY---CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
G PD+ Y L+ +C + A+ F E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 7/191 (3%)
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
RE G +YN ++ V +L R K EA +LL ME G +V +++ +
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGRIK-------EAHHLLLLMELKGYTPDVISYSTV 287
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
++ C+ + KL M G PN + +I L + ++ E +E M G
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + C I A F +M + PD TY +++ +C + +A
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 437 LFDEAVRNGVE 447
LF E G+E
Sbjct: 408 LFHEMFCKGLE 418
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK-IRRSEDAIKLFYRMGEWGCHPNET 346
F L EA +V M G+ +V++ NV ++ L K ++ AI +F E G N
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
++ ++I + Q R+ E ++ M+ GY Y + C +++ + E M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
K G P+S Y ++ C ++ +A F E +R G+
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 144/354 (40%), Gaps = 30/354 (8%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
TPS N++PE G F+H D++ + GR ++ +FL
Sbjct: 98 TPSKALQFFNWAPELG---------------FTHNDQSYFLMLEILGRARNLNVARNFLF 142
Query: 156 DNKE------VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
K L + S I +AG + + F M + G + ++ L
Sbjct: 143 SIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSM-KSVGVSPSVVTFNSLLLIL 201
Query: 210 CENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
+ G + A+ + + + + PD ++LI+G+C + +DE R +EM R +
Sbjct: 202 LKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPD 261
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V YN ++D LCR + ++ N P +V T+ L+ C +
Sbjct: 262 LVTYNTLVD---GLCRA-GKVNIAHNVVNGMVKKSTNLNP-DVVTYTTLVRGYCMKHEID 316
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID-RMKSAGYAIGKKDYYEF 386
+A+ +F M G PNE T+ LIK L + ++ + ++ + + G+
Sbjct: 317 EALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTL 376
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ C + A+ VFEKM PDS TY +L+ C ++A LFDE
Sbjct: 377 MNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDE 430
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 17/289 (5%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE----NGYASYAE 219
KT + RL++ P++ L FF + GF + S L++E L N ++
Sbjct: 86 KTTVFEVLRLIKT--PSKALQFFN-WAPELGFTHNDQSYFLMLEILGRARNLNVARNFLF 142
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ + + + +D+ + LI+ + G E+ ++ M G V +N +L +
Sbjct: 143 SIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILL 202
Query: 280 KLCRKKDPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
K R + A+ V +M GV + TFN+LI CK ++ + F M
Sbjct: 203 KRGR-------TNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSR 255
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM--KSAGYAIGKKDYYEFLTRLCGIERI 396
+ C P+ T+ L+ L +A +V +++ M KS Y + C I
Sbjct: 256 FKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEI 315
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++A+ VFE+M + G P+ TY+ L+ C ++DK +F+ A+ G
Sbjct: 316 DEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGG 364
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 28/257 (10%)
Query: 185 FFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDT---ANEIFPDDKICDLL 239
FF+ M R FK D D + +V+ LC G + A +V + + PD L
Sbjct: 249 FFKEMSR---FKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTL 305
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
++G+C+ ++DEA + EM G + + YN + + LC + ++ E L
Sbjct: 306 VRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTL---IKGLCEVQKIDKIKQIFEGALG 362
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
G + T N L++ C DA+++F +M P+ T+ VLI++L Q
Sbjct: 363 G---GGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRG 419
Query: 360 RVGEGDEMIDRMKSAGYAI----------GKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+++ D + + K +EF LC + +A VF ++
Sbjct: 420 NFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEF---LCRNGKTAKAERVFRQLMKR 476
Query: 410 GHNPDSETYDLLMTKWC 426
G D ++ +L+ C
Sbjct: 477 G-TQDPLSFKILIKGHC 492
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 100/259 (38%), Gaps = 10/259 (3%)
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVD 246
E + RD G + + + E LC NG + AE++ + D +LIKG C +
Sbjct: 435 EILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHCRE 494
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G + L M R F Y ++D L +K +P EK++ + + V
Sbjct: 495 GTFEAGYELLVLMLRRDFVPDLETYQSLID---GLLQKGEPLVAYQTLEKMI---KSSHV 548
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P TF+ +++ L + ++ + M E N ++ L+ + + +
Sbjct: 549 PE-TSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFK 607
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ + + GY + D E + L + A + N D + D ++ C
Sbjct: 608 IVGLLYANGYVV---DMEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLC 664
Query: 427 AHNRVDKANALFDEAVRNG 445
R +A L+ E V G
Sbjct: 665 KMKRHSEAFGLYYELVEKG 683
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 156/375 (41%), Gaps = 11/375 (2%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S ++ T LV L LG W + H E + D G+ + F +
Sbjct: 131 SGISATHDLVSQLLKRFSNQWLIALGVFIWAKNQTGYVHKPEIYNSMIDILGKSRKFSLM 190
Query: 151 HDFLVDNKEVLGPKTLAS---CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
D + + + G +L + + RLVR G+ + + F +E+ +G + +++ ++++
Sbjct: 191 WDLVQEMSGLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLEK-FGLSKSTEAMNVLMD 249
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
L NG A + + + D + ++L G+C +A++ EM GF
Sbjct: 250 ILARNGRVEDARAVALEFEGCLTLDYRSYNILSSGYCKARMFGDARKTMEEMEERGFHPN 309
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V+Y ++ + +KD FR E +L +M+ G P ++ T+ V I L K R+
Sbjct: 310 VVSYTAFIEAYGE---QKD-FR---NVEIILNEMQEKGCPPDLITYTVYIRALGKARQIN 362
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A+++ + G + LI SL + R+ + + + ++ G Y +
Sbjct: 363 KALEICEEIKRNGFVLGTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMI 422
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ C + + E A+ + KM+ D PD +TY L+ C + L + N V
Sbjct: 423 SAACALSQDESALKLLHKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVS 482
Query: 448 VKPKEYRVDPRYLKK 462
+ Y + L+K
Sbjct: 483 IDIVTYDLLVHGLRK 497
>gi|302813417|ref|XP_002988394.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
gi|300143796|gb|EFJ10484.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
Length = 388
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + LI G C + D+A +L REM T+ YN +++ + + R
Sbjct: 116 PDVVTYNTLISGLCKVRRADDALQLMREMEPAP---NTITYNTVINGLWR-------SRK 165
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+EA+ +L +M G P +V T+N +I+NLC+ R E A+ +F M + C +E TF
Sbjct: 166 DTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEVTFAT 225
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ + R+ + +D M AG K Y + L LC ++A +F M G
Sbjct: 226 LVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRG 285
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ P +Y++L+ C RV+ A LF E
Sbjct: 286 YAPTLVSYNVLLKGLCKALRVEHALVLFRE 315
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA--YNCILDCVSKLCRKKDPF 288
PD+ + LI + + D A+ L +M+ G G +A YN ++ ++C +
Sbjct: 44 PDEVTYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVR--- 100
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A+ +L M +G +V T+N LIS LCK+RR++DA++L M E PN T+
Sbjct: 101 ----KAKGILELMIDSGCKPDVVTYNTLISGLCKVRRADDALQL---MREMEPAPNTITY 153
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L+++ + E ++D M S G Y + LC +E+A+ VF M+
Sbjct: 154 NTVINGLWRSRKDTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRK 213
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
D T+ L+ + R++ A D R G+ K Y
Sbjct: 214 KKCETDEVTFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSY 258
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
V NV FN +++ + + A+ M + GC P+E T+ LI ++ R
Sbjct: 5 GAVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCDPDEVTYNTLIDVFHKLERFDS 64
Query: 364 GDEMIDRMKSAGY--AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E++++M +G + + Y + C + + +A + E M G PD TY+ L
Sbjct: 65 ARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYNTL 124
Query: 422 MTKWCAHNRVDKANALFDE 440
++ C R D A L E
Sbjct: 125 ISGLCKVRRADDALQLMRE 143
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 125/296 (42%), Gaps = 11/296 (3%)
Query: 163 PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
P +A + ID L++AGR L FE M + + +V++ LC+ A K
Sbjct: 141 PNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT-RTTYTVVIDGLCKAQMLPDACK 199
Query: 221 LVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ + + PD LI G+ K+DEA++L M G E V Y I+
Sbjct: 200 VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 259
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
KL + +EA++V+ M G + F L+S R+E+A ++ M
Sbjct: 260 KL-------DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 312
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
GC P+ + LI L+ RV E + D M G A Y + I +E A
Sbjct: 313 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 372
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ E M G PD Y+ LM + RVD+A ++D V +G++ + V
Sbjct: 373 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 96/230 (41%), Gaps = 16/230 (6%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +I+ + G ++ A + M + G AYN ++D KL R F
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF-- 408
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE-WGCHPNETTFL 349
V M +G+ N TFNVL+ L K +++ A LF M E P ++
Sbjct: 409 -----GVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYT 463
Query: 350 VLIKSLYQAARVGEG----DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+LI L +A RV E EMIDR G Y + L RI +A + E
Sbjct: 464 ILIDGLGKAGRVSEAFLQFQEMIDR----GIIPECHTYTSLIYSLAKAGRIPEAKKLVED 519
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M G NPD + Y L+T + VD A +F E ++ G Y+V
Sbjct: 520 MVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKV 569
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 11/263 (4%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWC 244
FF M D G + D + ++ C+ G KL+ PD + +I G+C
Sbjct: 29 FFNSM-IDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDVFLYTSVIHGYC 87
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
G LD A L ++Y ++ ++ D R+D EA ++ +++
Sbjct: 88 KAGDLDTGYFRAVTPKA---SLDVISYTTVIKGLA------DSKRID-EACELFEELKTA 137
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G NV + +I L K R ED +K F M C P TT+ V+I L +A + +
Sbjct: 138 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 197
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ ++M G Y + ++++A + + M T G P + TY ++
Sbjct: 198 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 257
Query: 425 WCAHNRVDKANALFDEAVRNGVE 447
+C + +++A + + G E
Sbjct: 258 FCKLDMINEAKEVIAQMRERGCE 280
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 13/278 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ID L GR + F+ M + G D + +++ + G A ++++ A
Sbjct: 323 SLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 381
Query: 228 E-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD + L+ G+ ++D+A + M G + V +N ++ + K +
Sbjct: 382 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 441
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
F L E +E VP + ++ +LI L K R +A F M + G P
Sbjct: 442 AFSLFKEM------LEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECH 495
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI SL +A R+ E ++++ M G + Y +T L ++ A VF++M
Sbjct: 496 TYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 555
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
G P+ TY +L + A R AL EAV+
Sbjct: 556 MKRGCAPNEVTYKVLRRGFRAAGR-----ALDLEAVKQ 588
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G + ++N +IS L I + ++A K F M + GC P+ F LI +A + G
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 365 DEMIDRM-----------------------KSAGY--AIGKK---DYYEFLTRLCGI--- 393
+++++ GY A+ K D + T + G+
Sbjct: 62 HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+RI++A +FE++KT G +P+ Y ++ R++ F+E
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEE 168
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 159/362 (43%), Gaps = 20/362 (5%)
Query: 93 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHD 152
V + LV L+ A F W + ++H+ G+ + F
Sbjct: 109 VAASSELVVEVLSRVRNHWEAAFTFFLWAAKQPGYAHSLRAYHSMISILGKMRKFDTAWA 168
Query: 153 FLVDNK------EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
+ + + ++ P TL+ I R + + F + + F + + ++
Sbjct: 169 LIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDVGKAINTF-YAHKQFKFGVGIEEFQNLL 227
Query: 207 EKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWC-VDGKLDEAKRLAREMYRGGF 264
LC AE+L+ N +FP D K ++++ GWC V G + EA+R REM G
Sbjct: 228 SALCRYKNVQDAEQLLFCNRN-VFPFDTKSFNIILNGWCNVIGSMREAERFWREMSNRGI 286
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ V+Y+ I+ C SK+ +L ++ + +ME + + + +N ++ L K
Sbjct: 287 QRDVVSYSSIISCYSKVTNLNKVLKLFNQMK----EME---IAPDRKVYNAVVHALAKAS 339
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
++A+ L M G P+ T+ LIK L +A ++ E E+ D M G + + Y+
Sbjct: 340 FVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYH 399
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
F L + E+ + EKMK G +PD +TY +L+ ++C ++D L+ E N
Sbjct: 400 AFFRIL---KSGEEVFMLLEKMKETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSEN 456
Query: 445 GV 446
GV
Sbjct: 457 GV 458
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 105/226 (46%), Gaps = 9/226 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++I+ +C + +A + F +G + +L S LCR K+ +AE+
Sbjct: 189 SIMIRRYCAVHDVGKAINTFYAHKQFKFGVGIEEFQNLL---SALCRYKNV----QDAEQ 241
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR-MGEWGCHPNETTFLVLIKSL 355
+L N P + ++FN++++ C + S + F+R M G + ++ +I
Sbjct: 242 LLF-CNRNVFPFDTKSFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCY 300
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + + ++ ++MK A +K Y + L +++A+++ + M+ G PDS
Sbjct: 301 SKVTNLNKVLKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDS 360
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
TY+ L+ ++++A +FDE ++ G+ + Y R LK
Sbjct: 361 VTYNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFFRILK 406
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 132/310 (42%), Gaps = 13/310 (4%)
Query: 143 RRKDFKAIHDFLVD-NKEVLGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
R+K FK+I + K L P ++ + I+ +G + + F +M +D G K
Sbjct: 118 RQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKM-KDRGCKPTT 176
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ +++ G KL+ + E + P+D+ + LI+ WC ++ EA +
Sbjct: 177 STFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVY 236
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
+M G + V YN L R S AE ++L+M+ N V N T ++I
Sbjct: 237 KMAASGLQPDVVTYN-------TLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIII 289
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ CK + +DA++ YRM +G HPN F LIK DE + M+ G
Sbjct: 290 NGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVK 349
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ + + +++ +F+ M G PD + +L + +KA +L
Sbjct: 350 PDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESL 409
Query: 438 FDEAVRNGVE 447
++GV+
Sbjct: 410 LTAMGKSGVQ 419
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 125/329 (37%), Gaps = 37/329 (11%)
Query: 154 LVDNKEVLGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
L+ +E + P +T S I R T+ +M G + D + + +
Sbjct: 201 LMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAAS-GLQPDVVTYNTLARAYAQ 259
Query: 212 NGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
NG S AE ++ + N + P+++ C ++I G+C +GK+ +A R M G V
Sbjct: 260 NGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVI 319
Query: 271 YNCIL--------------------------DCV--SKLCRKKDPFRLDSEAEKVLLDME 302
+N ++ D V S + L + +++ DM
Sbjct: 320 FNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMV 379
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G+ ++ F++L + E A L MG+ G PN F +I A ++
Sbjct: 380 KAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKME 439
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ ++M G K + + + ++A + + M+ G P T L+
Sbjct: 440 YASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAPVKSTIQLVA 499
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPK 451
W A ++A + ++N VE PK
Sbjct: 500 DAWHALGLANEA-----KRIKNDVEEAPK 523
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 10/294 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ ++ PD +I G+C +G +DEA L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G + TV+Y +L + R D AE+++ M G P N TFN L
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-------AEELMSQMIQQGCPPNPVTFNTL 467
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y L R+ + + +F+ +K D+ Y+ +++ C D+A
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIR 490
F V NG Y + + L K+ + E L E +R R +R
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ--ELLSELCSRGALRKHLMR 639
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 123/270 (45%), Gaps = 14/270 (5%)
Query: 184 GFFERMER------DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC- 236
G FER+ ++G D +++ +C+ G+ A +++ + + +C
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ ++KG C + EA+ L EM++ L V +N ++D C+ L +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD---FFCQNG----LVDRVIE 377
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M +G +V T+ +I+ CK ++A+ L M GC PN ++ +++K L
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
A R + +E++ +M G + + LC +EQA+ + ++M +G +PD
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+Y ++ + ++A L + V G+
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 24/252 (9%)
Query: 203 RLVVEKLCENG---------YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
+++E C +G A +A+ DT N C+L++ C G +DEA
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGN--------CNLVLNAICEQGCVDEAV 201
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L R++ G E V+YN +L LC K + E+++ +M N+ TF
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVL---KGLCMAKRW----GDVEELMDEMVRVDCAPNIVTF 254
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LI LC+ E ++ +M E GC P+ + +I + + + +E+++RM S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y L LC ER ++A + +M D T+++L+ +C + VD+
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 434 ANALFDEAVRNG 445
L ++ + +G
Sbjct: 375 VIELLEQMLSHG 386
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 122/308 (39%), Gaps = 35/308 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D + LV+ +CE G A L++ A D + + ++KG C+ + +
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV 235
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD------SE------------- 293
+ L EM R V +N + + LCR R+ SE
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTL---IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292
Query: 294 ------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
A ++L M G+ NV +N ++ LC R ++A +L M + C
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
++ TF +L+ Q V E++++M S G Y + C I++A+
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ + M + G P++ +Y +++ C+ R A L + ++ G P + +L
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Query: 462 KPIAVKKG 469
K V++
Sbjct: 473 KKGLVEQA 480
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+++G C G++ +A + EM G Y+ IL+ CR FR + +VL
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILE---AACRSGG-FR---NSVRVL 169
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G + N++++ +C+ ++A+ L ++ +GC + ++ ++K L A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R G+ +E++D M A + + LC E+ V +M G PD Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEK 478
++ C ++ AN + + G++ Y LK + ++ K+ E L +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT---VLKGLCSAERWKEAEELLSE 346
Query: 479 MARKRRRLKQIRLSFV 494
M +K L + + +
Sbjct: 347 MFQKDCPLDDVTFNIL 362
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+V C G A +LV + E PD + LI+G C G+ A + EM R
Sbjct: 132 MVAGYCGAGQLDAARRLVAEMPVE--PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRC 189
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
V Y +L+ K K +A K+L +M G ++ T+NV+++ +C+
Sbjct: 190 VPDVVTYTILLEATCKRSGYK-------QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R +DAI+ + +GC PN ++ +++K L A R + +E++ M G +
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
++ LC +E A+ V E++ G P+S +Y+ L+ +C ++DKA A D V
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362
Query: 445 G 445
G
Sbjct: 363 G 363
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 9/272 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKI 235
GR L + M R D + +++E C+ A KL+ + ++ PD
Sbjct: 172 GRTANALAVLDEMLRRRCVP-DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVT 230
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
++++ G C +G++D+A + + G E TV+YN +L + R +D AE
Sbjct: 231 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED-------AE 283
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+++ +M G P NV TFN+LIS LC+ E A+++ ++ ++GC PN ++ L+ +
Sbjct: 284 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 343
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ ++ + +D M S G Y LT LC ++ A+ + ++K G P
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 403
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+Y+ ++ + +A L +E V G++
Sbjct: 404 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 435
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 8/244 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++ LC G + A ++ + PD +L++ C +A +L
Sbjct: 157 DAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 216
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM G V YN + V+ +C++ R+D +A + L ++ G N ++N++
Sbjct: 217 DEMRDKGCTPDIVTYNVV---VNGICQEG---RVD-DAIEFLKNLPSYGCEPNTVSYNIV 269
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ LC R EDA +L MG+ GC PN TF +LI L + V E+++++ G
Sbjct: 270 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 329
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y L C +++++AM+ + M + G PD +Y+ L+T C VD A
Sbjct: 330 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 389
Query: 437 LFDE 440
L +
Sbjct: 390 LLHQ 393
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 133/287 (46%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + + GR + F + + YG + + S +V++ LC AE+L+ + +
Sbjct: 235 VNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 293
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + + ++LI C G ++ A + ++ + G +++YN +L C++K
Sbjct: 294 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL---HAFCKQK--- 347
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++D +A L M G ++ ++N L++ LC+ + A++L +++ + GC P ++
Sbjct: 348 KMD-KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY 406
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L +A + E E+++ M S G Y LC +RIE A+ F K++
Sbjct: 407 NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 466
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G P++ Y+ ++ C A LF + NG Y +
Sbjct: 467 MGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV-----KDTANEIFPDDKICDLLIKGWCVDGK 248
G D S ++ LC +G A +L+ K A + + + D L K GK
Sbjct: 363 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA----GK 418
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK---KDPFRLDSEAEKVLLDMEYNG 305
EA L EM G + + Y+ I + LCR+ +D R + + DM G
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTI---AAGLCREDRIEDAIRAFGKVQ----DM---G 468
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ N +N +I LCK R + AI LF M GC PNE+T+ +LI+ L + E
Sbjct: 469 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 528
Query: 366 EMIDRMKSAG 375
+++D + S G
Sbjct: 529 DLLDELCSRG 538
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 53/252 (21%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD C LIK G+ EA+R+ + G ++ +AYN + V+ C +L
Sbjct: 94 PDAGTCAALIKKLSASGRTAEARRV---LAACGPDV--MAYNAM---VAGYC---GAGQL 142
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+ A +++ +M V + T+N LI LC R+ +A+ + M C P+ T+ +
Sbjct: 143 DA-ARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTI 198
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+++ K +GY +QAM + ++M+ G
Sbjct: 199 LLEA---------------TCKRSGY--------------------KQAMKLLDEMRDKG 223
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
PD TY++++ C RVD A G E Y + LK ++ +
Sbjct: 224 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI---VLKGLCTAERWE 280
Query: 471 KRETLPEKMARK 482
E L +M +K
Sbjct: 281 DAEELMGEMGQK 292
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 134/334 (40%), Gaps = 34/334 (10%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
CID +AG+ FF M + +G D + ++ LC+ A +L + N
Sbjct: 271 CIDCFGKAGKVDMSWKFFHEM-KSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQN 329
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P + +I G+ GK DEA L G +AYNCIL C+ K R ++
Sbjct: 330 RKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEA 389
Query: 288 FRLDSEAEK----------VLLDM-----------------EYNGVPRNVETFNVLISNL 320
R+ E ++ +L+DM E G+ NV T N++I L
Sbjct: 390 LRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRL 449
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK ++ E+A +F M + C PN TF LI L + RV + + ++M G+ G
Sbjct: 450 CKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA 509
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + R E ++++M G +PD + M +K ALF E
Sbjct: 510 IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFRE 569
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
+G + Y + L VK G ET
Sbjct: 570 INAHGFIPDARSYSILIHGL-----VKAGLANET 598
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 139/320 (43%), Gaps = 36/320 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID L R G+ L + MER G + ++ +++++LC+ A+KL + A I
Sbjct: 411 IDMLCREGKLNAALEIRDDMERA-GLFPNVLTVNIMIDRLCK------AQKL--EEACSI 461
Query: 230 FP--DDKIC-------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
F DDK+C LI G G++D+A L +M G G + Y ++ K
Sbjct: 462 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 521
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
RK+D K+ +M + G ++ N + + K +E LF + G
Sbjct: 522 CGRKED-------GHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG 574
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ ++ +LI L +A E E+ MK G + Y + C ++ +A
Sbjct: 575 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 634
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY------- 453
+ E+MK GH P TY ++ +R+D+A LF+EA NG+++ Y
Sbjct: 635 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGF 694
Query: 454 ----RVDPRYLKKPIAVKKG 469
R+D YL ++KG
Sbjct: 695 GKVGRIDEAYLIMEELMQKG 714
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 136/306 (44%), Gaps = 23/306 (7%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
H F+ D ++ + I LV+AG + F M ++ G D + V++ C
Sbjct: 573 HGFIPD------ARSYSILIHGLVKAGLANETYELFYAM-KEQGCVLDTHAYNAVIDGFC 625
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDG-----KLDEAKRLAREMYRGGFE 265
++G + A +L+++ + P ++ G +DG +LDEA L E G +
Sbjct: 626 KSGKVNKAYQLLEEMKVKGHPPT----VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 681
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
L V Y+ ++D K+ R+D EA ++ ++ G+ NV T+N L+ L K
Sbjct: 682 LNVVVYSSLIDGFGKV------GRID-EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 734
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+A+ F M + C PN+ T+ +LI L + + + M+ G Y
Sbjct: 735 INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTT 794
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++ L I +A +F + K +G PDS +Y+ ++ + N+ A ALF+E G
Sbjct: 795 MISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKG 854
Query: 446 VEVKPK 451
+ K
Sbjct: 855 CNIHTK 860
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 179/451 (39%), Gaps = 59/451 (13%)
Query: 29 FSRFSPTHYLNFLSKPFSSKPTSNPKTIDDP--------DQVIARSLSG------ELLEN 74
F F Y++ + K FSS + P +D D+ I R+ G ++
Sbjct: 11 FRSFPKGCYISSICKKFSSS-CNGPSEVDGKVVFSADGVDKKIPRNNEGIRKGVDDVCCI 69
Query: 75 LEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETL 134
LE+ P + L P P LV L +A A+ + W + H E
Sbjct: 70 LESGPWGPTLENSLSALGEKPLPELVIGVLKRLKDANTAV-NYFQWAEKQTEKVHCPEAY 128
Query: 135 SFFTDYFGRRKDFKAIHDFLVD-NKEVLGPKTLASC--IDRLVRAGRPTQVLGFFERMER 191
+ R +F + L + + GP + S + V++ + + + M R
Sbjct: 129 NSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM-R 187
Query: 192 DYGFK----------------RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI 235
+ F+ R+ D + ++ ++ E GY + +F
Sbjct: 188 KFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGY---------EVNVHLFTT--- 235
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
LI+ + +G++D A L EM + V YN +DC K + ++ E
Sbjct: 236 ---LIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHE-- 290
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
M+ +G+ + T+ +I LCK R ++A++LF ++ + P + +I
Sbjct: 291 -----MKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGY 345
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
A + E +++R K+ G Y LT L R+E+A+ +FE+MK D P+
Sbjct: 346 GSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNV 404
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
TY++L+ C +++ A + D+ R G+
Sbjct: 405 PTYNILIDMLCREGKLNAALEIRDDMERAGL 435
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 125/319 (39%), Gaps = 44/319 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYG---------------FK--RDKDSLRL--- 204
T +S ID L + GR +E+M D G FK R +D ++
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKM-LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 534
Query: 205 VVEKLCE------NGY------ASYAEK---LVKD-TANEIFPDDKICDLLIKGWCVDGK 248
+V C N Y A EK L ++ A+ PD + +LI G G
Sbjct: 535 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGL 594
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+E L M G L T AYN ++D K + ++L L +M+ G P
Sbjct: 595 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL-------LEEMKVKGHPP 647
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V T+ +I L KI R ++A LF G N + LI + R+ E ++
Sbjct: 648 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIM 707
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ + G + L L E I +A+ F+ MK P+ TY +L+ C
Sbjct: 708 EELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 767
Query: 429 NRVDKANALFDEAVRNGVE 447
+ +KA + E + G++
Sbjct: 768 RKFNKAFVFWQEMQKLGLK 786
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+D+ A +L +M+ N + ++ +NV I K + + + K F+ M G P++ T+
Sbjct: 245 RVDA-ALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTY 303
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L +A R+ E E+ ++++ Y + + ++A + E+ K
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA 363
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
G P Y+ ++T RV++A +F+E R+ V P
Sbjct: 364 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVP 405
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 166/404 (41%), Gaps = 33/404 (8%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
TP LV L+ G A L F WL + HT ET + GR KDFK +
Sbjct: 684 TPGLVLEILHNCSMHGNAALKFFSWLGVQTGYCHTKETYNMAMKISGREKDFKHMRSLFY 743
Query: 156 DNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+ + ++ P T A I + R G L F M +D G+ + + + ++ LC
Sbjct: 744 EMRRKGCLITPDTWAIMIMQYGRTGLTEISLKTFTEM-KDNGYIPNDSTYKYLLISLC-- 800
Query: 213 GYASYAEKLVKDTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
K+ D A +IF PD ++ + C G+L EA++ + R G
Sbjct: 801 --GKKGRKV--DEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSEARKSTDSLCRIG 856
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEA--EKVLLDMEYNGVPRNVETFNVLISNLC 321
+ + ++Y+ + + + R ++ L E E+ LD +Y T+ L+ L
Sbjct: 857 YTI-PLSYSLYIRALCRSGRLEEALSLLDEVGTERSTLD-QY--------TYGTLVHGLL 906
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ R E+A+ M E G +P + LI ++ ++ + ++ ++M+ G
Sbjct: 907 RKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVV 966
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + +ER + A SV +K G PD +TY + ++ C + ++A L
Sbjct: 967 TYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLLSRM 1026
Query: 442 VRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRR 485
+ +G + P + K R + +K+A K +R
Sbjct: 1027 LEDG--IVPSTINFRTVFFGLNCEGKNDLARTVMQQKLALKSKR 1068
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 166/410 (40%), Gaps = 52/410 (12%)
Query: 63 IARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLT 122
+ R ++G + E D + + +RL + + P +V+ L + F W+
Sbjct: 146 VVREITG--IVRAENDLVAMEERLENLGFYFEP--EIVEKVLKRCFKVPHLAFRFFSWVK 201
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD---NKEVLGPKTLASCIDRLVRAGRP 179
F HT +T G K+FK + D + + N KT + I + +A
Sbjct: 202 MRDGFCHTTKTYYTMLYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILISQFGKAKLI 261
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-----YASYAEKLVKD---------- 224
+ L FFE+M + G + D+ +++V LC G A Y E + KD
Sbjct: 262 GKALLFFEKM-KTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLSLYKI 320
Query: 225 ----------------TANEI-----FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
AN++ P+ + ++K +CV GK+ EA L R++
Sbjct: 321 LLISMAKSGDVGAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKD 380
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ Y + V LCR R+ E V + + N + + + + ++I+ +
Sbjct: 381 I---LIDYEYLGTLVKGLCRGD---RITDAVEIVEIMKKRNLI--DAKIYGIIINGYLRK 432
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ AI+LF RM E G P +T+ L++ L+ + +G E+ + M G +
Sbjct: 433 KDLSKAIELFQRMKESGIQPITSTYTELMQCLFNLNQYDKGFELFNEMLERGIRVDSVAT 492
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
+ I +A VF MK G NP ++Y + + + C +R D+
Sbjct: 493 MAIVAAHVRQNHISEAWEVFNTMKDKGANPTWKSYSIFIKELCRVSRTDE 542
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGE---GDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ +M + CH +T + +L Y A E D++++ M+ K + +++
Sbjct: 199 WVKMRDGFCHTTKTYYTML----YIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILISQ 254
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
+ I +A+ FEKMKT G PD + Y +++ C + + A A + E V+ + +
Sbjct: 255 FGKAKLIGKALLFFEKMKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLD 314
Query: 450 PKEYRV 455
Y++
Sbjct: 315 LSLYKI 320
>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Brachypodium distachyon]
Length = 753
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 143/336 (42%), Gaps = 12/336 (3%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ D +V + ++ K I LV+ G+ + E M G D + +++ +
Sbjct: 312 CVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGGIP-DTITCNMLIAQ 370
Query: 209 LCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
LC G S A +++D + P+ + LI+ C D+A +E R G+
Sbjct: 371 LCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLRIGWPPY 430
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ ++D + K C K A +VL ++ G +V T+N LIS CK R +
Sbjct: 431 VMTNTLLVDLICKKCGSK-------RAMEVLDELSLEGCQPDVVTYNALISASCKADRLK 483
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
DA + R+ G PN TT+ +L+ SL R E +++ MK A Y F+
Sbjct: 484 DAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFI 543
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C ++QA+ V EKM +D PD TY+ L+ V++A + +NG +
Sbjct: 544 NYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQ 603
Query: 448 VKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKR 483
+ Y L VKK L ++MA R
Sbjct: 604 LVLITYNTLIDALANKGEVKKAM---VLFDEMASGR 636
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 9/268 (3%)
Query: 197 RDKDSLRLV-VEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKR 254
+DK L L + + C NG A ++ + + PD K C LI+G GK ++A++
Sbjct: 288 KDKGMLYLGNLRRYCNNGKLIQACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQ 347
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
+ M G T+ N + +++LCR S A VL DM Y+G N TFN
Sbjct: 348 VLEVMVLSGGIPDTITCNML---IAQLCRGGQL----SSAMSVLEDMRYSGTSPNGITFN 400
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LI +C + AI + G P T +L+ + + E++D +
Sbjct: 401 TLIRCMCNQHMYDKAITFWKEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLE 460
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G Y ++ C +R++ A ++ ++ +G P+S TY +L+ C R +
Sbjct: 461 GCQPDVVTYNALISASCKADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEV 520
Query: 435 NALFDEAVRNGVEVKPKEYRVDPRYLKK 462
L R E Y + Y K
Sbjct: 521 CDLLAHMKRANCEPDVTAYNIFINYFCK 548
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 8/251 (3%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
L+V+ +C+ + A +++ + + E PD + LI C +L +AK + +
Sbjct: 436 LLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTILTRLIAE 495
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G E + Y CIL + LC K R +E +L M+ +V +N+ I+ CK
Sbjct: 496 GLEPNSTTY-CIL--LHSLCNK----RRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCK 548
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ AI + +M C P+ T+ L+ ++ + V E + ++ G+ +
Sbjct: 549 YGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLIT 608
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + L +++AM +F++M + +PD TY L+ +C N ++A L + +
Sbjct: 609 YNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTL 668
Query: 443 RNGVEVKPKEY 453
G +VK +
Sbjct: 669 ALGFQVKTTTF 679
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 14/253 (5%)
Query: 194 GFKRDKDSLRLVVEKLC-ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + + + +++ LC + +A + L PD ++ I +C G LD+A
Sbjct: 496 GLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQA 555
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY---NGVPRN 309
+ +M V YN +L+ +SK + E+ L+ + NG
Sbjct: 556 IDVLEKMVSDKCCPDIVTYNTLLNAISK----------EGMVEEALVIAHFIRQNGWQLV 605
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
+ T+N LI L + A+ LF M P++ T+ L+ + E E+++
Sbjct: 606 LITYNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLN 665
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
R + G+ + + + LC ++E A + M ++ +N +S Y ++ +
Sbjct: 666 RTLALGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNTNSSFYLSIVRRVAKSG 725
Query: 430 RVDKANALFDEAV 442
R+++A L E +
Sbjct: 726 RIEEAERLHQELI 738
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 144/368 (39%), Gaps = 30/368 (8%)
Query: 108 PEAGRAILGFNHWLTQNANFS--HTDETLSFFTDYFGRRKDFKAIHDFL-------VDNK 158
P GR L F +W+ Q H LS T R + ++ L V +K
Sbjct: 22 PVHGRLALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSK 81
Query: 159 EVLGP--------KTLASCIDRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
V G K+ S D L+R G L F R+ GF + +++
Sbjct: 82 SVFGALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETF-RLMGIRGFNPSVYTCNMLL 140
Query: 207 EKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
KL + K+ A + PD ++LI CV+GKL +A L ++M G+
Sbjct: 141 GKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYV 200
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
V YN +L+ K R K L + M G+ + T+N+L+ +LCK R
Sbjct: 201 PSVVTYNTVLNWYCKKGRYKAALELIDQ-------MGSKGIEADACTYNMLVDDLCKNNR 253
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
S L +M + PNE T+ +I + ++G + M Y
Sbjct: 254 SAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNA 313
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ C EQA+++ E M+ G P+ +Y L+ C H + + + ++ + NG
Sbjct: 314 LIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNG 373
Query: 446 VEVKPKEY 453
+ V Y
Sbjct: 374 MIVGCIAY 381
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 130/298 (43%), Gaps = 13/298 (4%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+++ E GPK + ++ ++ L R + ERM + G + +++ L
Sbjct: 330 ILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMN-GMIVGCIAYTAMIDGL 388
Query: 210 CENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C NG + + KL+ K + + PD +LI G+C GK+ K + +MY+ G +
Sbjct: 389 CRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNS 448
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ Y + + C+ D EA KV + M G N NVL+S+LCK +
Sbjct: 449 IIYTTL---IYNYCKTGDVV----EAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGV 501
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A F+ M + G PN TF +I + + M D M AG+ Y L
Sbjct: 502 AEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLK 561
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC + ++A + +K+ D+ TY+ ++ + + A ALFDE V+ V
Sbjct: 562 ALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNV 619
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 119/282 (42%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ + GR L ++M G + D + ++V+ LC+N ++ L+K
Sbjct: 205 TYNTVLNWYCKKGRYKAALELIDQMGSK-GIEADACTYNMLVDDLCKNNRSAKGYLLLKK 263
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I P++ + +I G+ +GK+ A R+ +EM V YN ++D C
Sbjct: 264 MRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALID---GHCH 320
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +A +L ME G N +++ L++ LC+ + E + + RM G
Sbjct: 321 DGNF----EQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIV 376
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ +I L + + E +++D+M G + + C + +I+ +
Sbjct: 377 GCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEII 436
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
KM G P+S Y L+ +C V +A ++ R G
Sbjct: 437 CKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIG 478
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 13/244 (5%)
Query: 138 TDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
TD G+ D I + ++ ++ S + R V + + +L E +ER G
Sbjct: 813 TDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSR-VSTVQESHLL-LHEMLER--GCIP 868
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D+ +V ++C G+ A KL + A I D L++G GK++EAK +
Sbjct: 869 DRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVL 928
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M R + T+A L + CR + EA K+ M++ V +V +NVL
Sbjct: 929 DFMLRKSL-IPTIATFTTL--MHMFCRNESLV----EALKLKDTMDFCDVKLDVIAYNVL 981
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA-ARVGEGDEMIDRMKSAG 375
IS LC A+KL+ + + G PN TT+ +LI +++ + +G+ ++ ++ G
Sbjct: 982 ISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERG 1041
Query: 376 YAIG 379
G
Sbjct: 1042 VISG 1045
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 7/211 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
IFPD C LI G+C LD +L ++M G + +N + + K C +
Sbjct: 761 IFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNML---IMKYCETDEV- 816
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A ++ M + ++ T + +IS L ++ +++ L + M E GC P+ +
Sbjct: 817 ---GKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQY 873
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+ L+ + + + ++ D M++ G + G + L ++E+A V + M
Sbjct: 874 IALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLR 933
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
P T+ LM +C + + +A L D
Sbjct: 934 KSLIPTIATFTTLMHMFCRNESLVEALKLKD 964
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 26/284 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D L RAG+ L F E ME++ G D L+ + NGY S K+ K A +I
Sbjct: 666 VDGLFRAGQSKAALYFCEDMEKN-GLCAD-----LIATNVILNGY-SRMGKMAK--AGDI 716
Query: 230 F----------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
F P ++L+ G+ L + L M R G + L C S
Sbjct: 717 FTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGI------FPDKLTCHS 770
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+ LD K+L M +GV + TFN+LI C+ A L M +
Sbjct: 771 LILGFCKSAMLDV-GLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLF 829
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
P+ TT +I L + + V E ++ M G ++ Y + R+C + I A
Sbjct: 830 DIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGA 889
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ ++M+ G + L+ +V++A + D +R
Sbjct: 890 FKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLR 933
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 12/197 (6%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N F++LI + DA++ F MG G +P+ T +L+ L + +VG
Sbjct: 97 NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M + + + LC ++++A + +KM+ G+ P TY+ ++ +C
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRV-------DPRYLKKPIAVKKGKKRETLPEKMAR 481
R A L D+ G+E Y + + R K + +KK +KR P ++
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276
Query: 482 KRRRLKQIRLSFVKKPK 498
I FVK+ K
Sbjct: 277 -----NSIINGFVKEGK 288
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 131/331 (39%), Gaps = 30/331 (9%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDN-KEVLGPKTL--ASCIDRLVRAGRPTQVLGFFERM 189
T S + F R K + + + K L P ++ + I + G + + M
Sbjct: 415 TFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAM 474
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGK 248
R G+ + ++V LC++G AE + P+ D +I G+ G
Sbjct: 475 SR-IGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGN 533
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+A + EM + G Y +L LCR F+ EA+++L + Y +P
Sbjct: 534 GLKAFSMFDEMIKAGHHPSHFTYGGLL---KALCRA-GKFK---EAKRLLDKLHY--IPS 584
Query: 309 NVET--FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
V+T +N ++ K DA+ LF M + P+ T+ ++ L + +
Sbjct: 585 AVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGK------ 638
Query: 367 MIDRMKSAGYAIGKKD-------YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
M+ + G +GK Y F+ L + + A+ E M+ +G D +
Sbjct: 639 MVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATN 698
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+++ + ++ KA +F + +G+ + P
Sbjct: 699 VILNGYSRMGKMAKAGDIF-TMMWSGITISP 728
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 93/240 (38%), Gaps = 28/240 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN--EIFPDDKICDLLIKGWCVDGKLDE 251
G D+ + +++ K CE A LV + N +IFPD D +I + E
Sbjct: 795 GVAVDQCTFNMLIMKYCETDEVGKAFDLV-NIMNLFDIFPDMTTHDSIISVLSRVSTVQE 853
Query: 252 AKRLAREMYRGGFELGTVAYNCILD------CVSKLCRK---KDPFRLDSEAEKVLLDME 302
+ L EM G CI D V+++CR F+L E ME
Sbjct: 854 SHLLLHEMLERG---------CIPDRRQYIALVNRMCRMGHIHGAFKLKDE-------ME 897
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G+ + L+ L K + E+A + M P TF L+ + +
Sbjct: 898 ALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLV 957
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E ++ D M + Y ++ LC + A+ +++++K G P+ TY +L+
Sbjct: 958 EALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILI 1017
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 94/230 (40%), Gaps = 16/230 (6%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS---KLCRKK 285
+ P+ + + G G+ A +M + G +A N IL+ S K+ +
Sbjct: 655 VSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAG 714
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRN--VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D F M ++G+ + + T+N+L+ K + L+ M G P
Sbjct: 715 DIF-----------TMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFP 763
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
++ T LI ++A + G +++ +M G A+ + + + + C + + +A +
Sbjct: 764 DKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLV 823
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
M PD T+D +++ + V +++ L E + G ++Y
Sbjct: 824 NIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQY 873
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L + + L + G+ + + + R+ + GF + + ++ LC+ G A +L+K
Sbjct: 459 LTTLVGGLCKEGKHSDAVELWFRL-LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 517
Query: 226 ANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
F DKI + LI G C +GK++E +L EM + G E T YN ++ + ++ +
Sbjct: 518 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 577
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ L +E + L VP NV T+ V+I CK + E+ KLF + N
Sbjct: 578 DEAVNLWNECKSRDL------VP-NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 630
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ LI++ + E ++ D M+S G Y + +C I R+E A + +
Sbjct: 631 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 690
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+M+ +G P+ Y L+ +C ++DK + E
Sbjct: 691 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 9/307 (2%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G+ + + I + ++ + P + I L R L F M + +
Sbjct: 399 IGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR-NMRPNDG 457
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREM 259
L +V LC+ G S A +L + F + + + LI G C G + EA RL ++M
Sbjct: 458 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 517
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
GF L + YN ++ K + ++ F+L E K G+ + T+N+LI
Sbjct: 518 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK-------QGIEPDTFTYNLLIHG 570
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+C+I + ++A+ L+ PN T+ V+I +A ++ EG+++ + + +
Sbjct: 571 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 630
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + C +A + + M++ G P + TY L+ C R++ A L D
Sbjct: 631 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 690
Query: 440 EAVRNGV 446
E + G+
Sbjct: 691 EMRKEGL 697
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
E +E+ GF ++ +++ C+ G A ++ D ++ I P+ + +I+G+C
Sbjct: 341 ETLEK--GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 398
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G++++A+ + EM GF + A+ I + LC R +S A + L +M
Sbjct: 399 IGQMEQAECILEEMLSRGFSINPGAFTTI---IHWLCMNS---RFES-ALRFLREMLLRN 451
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ N L+ LCK + DA++L++R+ E G N T LI L + + E
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ +M G+ + K Y ++ C ++E+ + +M G PD+ TY+LL+
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571
Query: 426 CAHNRVDKANALFDEA 441
C ++D+A L++E
Sbjct: 572 CRIGKLDEAVNLWNEC 587
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 118/274 (43%), Gaps = 8/274 (2%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D + L++ +C G A L + + ++ P+ ++I G+C K++E
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++L E+ EL +V YN + + CR + EA K+ DM G+P T
Sbjct: 616 EKLFTELLTQNLELNSVVYNTL---IRAYCRNGNTV----EAFKLHDDMRSKGIPPTTAT 668
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LI +C I R EDA L M + G PN + LI + ++ + ++ M
Sbjct: 669 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 728
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S K Y + ++ A + +M G PD+ TY++L +C +++
Sbjct: 729 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 788
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
+ + D + G+ + Y ++P A+
Sbjct: 789 EGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 10/298 (3%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ FL + KT + LV+A + FE M + G D +
Sbjct: 198 GVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ--GVSPDVYLFSTAINA 255
Query: 209 LCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
C+ G A +L D + P+ + LI G C G LDEA R +M + G
Sbjct: 256 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ Y+ +++ + KL + F +EA VL + G N +N LI CK+
Sbjct: 316 LITYSVLINGLMKL----EKF---NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 368
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
DA+++ M G +PN T +I+ + ++ + + +++ M S G++I + +
Sbjct: 369 DALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 428
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
LC R E A+ +M P+ L+ C + A L+ + G
Sbjct: 429 HWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FP K C L+ +L+++ + M R G ++ ++ K + +D
Sbjct: 208 VFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAI 266
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L DME GV NV T+N LI LCK ++A + +M + G + T+
Sbjct: 267 QL-------FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITY 319
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VLI L + + E + ++ G+ + Y + C + + A+ + M +
Sbjct: 320 SVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVS 379
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
G NP+S T + ++ +C ++++A + +E + G + P + +L
Sbjct: 380 KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 431
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 84/211 (39%), Gaps = 10/211 (4%)
Query: 148 KAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
K + L N E L + I R G + + M R G + ++
Sbjct: 617 KLFTELLTQNLE-LNSVVYNTLIRAYCRNGNTVEAFKLHDDM-RSKGIPPTTATYSSLIH 674
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+C G A+ L+ + E + +C LI G+C G++D+ + +EM
Sbjct: 675 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHP 734
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+ Y ++D SK K A K+L +M G+ + T+NVL + CK +
Sbjct: 735 NKITYTVMIDGYSKSGDMK-------TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKI 787
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
E+ K+ M + G +E T+ L+ Q
Sbjct: 788 EEGFKICDYMSQEGLPLDEITYTTLVHGWQQ 818
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 310 VETFNVLISNLCKIRRS---EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
V ++LI C R+ +AI +F + G P T L+ SL +A + +
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRL---CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ + M+ D Y F T + C ++E A+ +F M+ G +P+ TY+ L+
Sbjct: 234 VFETMRQGV----SPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIH 289
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C H +D+A ++ V++GV Y V
Sbjct: 290 GLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 321
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 11/267 (4%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWC 244
+E MER +G + + ++ LC++G K ++ E F PD + LI +C
Sbjct: 246 YEEMER-FGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYC 304
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
G+LD+A L + MYR G V+Y +++ + K R + EA ++ M +
Sbjct: 305 RKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVR-------EAHQLFHRMVHR 357
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ ++ T+N LI CK + +++ L + M G P+ T VL++ + +
Sbjct: 358 GLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSA 417
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ ++ G +I + Y + LC R A ++ E+M DGH P+ E Y+ L+
Sbjct: 418 LNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKS 477
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPK 451
+C + + +A L E V E+KP
Sbjct: 478 FCQCDCIAEALLLKMEMVDK--EIKPN 502
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 27/284 (9%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-------LVKDT--ANEIFPDD 233
L FF ++ D G + + +VV L + S A K LVKD + ++F +
Sbjct: 118 LSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKNL 177
Query: 234 KIC-----------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+C D+L+K + G++ E R R M R GF + N +L+ + KL
Sbjct: 178 ILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKL- 236
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+V +ME G+ N+ TFN+L LCK + K +M E G
Sbjct: 237 ------NYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFD 290
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ LI S + R+ + + M G Y + LC R+ +A +
Sbjct: 291 PDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQL 350
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
F +M G +PD TY+ L+ +C ++ ++ +L + + NG+
Sbjct: 351 FHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGI 394
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 44/270 (16%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
++ L + GR + F RM G D + ++ C+ G + L+ D N
Sbjct: 335 MNGLCKEGRVREAHQLFHRMVHR-GLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 393
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD C +L++G+ +GK A L E+ R G + Y+ + + LCR+ PF
Sbjct: 394 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYL---IVALCRENRPF 450
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A+ +L M +G +E +N LI + C+ +A+ L M + PN T+
Sbjct: 451 ----AAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATY 506
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L + +R EG+ ++ M ++G
Sbjct: 507 RAVIGCLSRLSRSMEGESLVGEMVASGML------------------------------- 535
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
PD E L +C N +DKA +L
Sbjct: 536 ----PDLEICRALFYGYCRENDIDKAESLL 561
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 141/337 (41%), Gaps = 14/337 (4%)
Query: 132 ETLSFFTDYFG--RRKDF-KAIHDFLVDNKEVLGPKTL--ASCIDRLVRAGRPTQVLGFF 186
+T ++ + G R+ D A+ F KE P T+ ++ I+ L +GR +
Sbjct: 419 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI 478
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
M +G + + LC+ G A +L D N+ P+ LI G CV
Sbjct: 479 REMIL-HGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 537
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G L A L M R G TV YN +++ + + R K F VL M NG
Sbjct: 538 SGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF-------VVLNLMGRNG 590
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ N+ T+N +I C + + A+ + M + G N T+ +IK +
Sbjct: 591 LFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 650
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++D M+ G + Y E + C I ++E A +F +M DG P+ TY L+ +
Sbjct: 651 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 710
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
C ++D A +L + R+G + Y V L K
Sbjct: 711 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 747
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 139/331 (41%), Gaps = 32/331 (9%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
D L + +G ++ + L R G V+ + RM + G + + V+ LC+
Sbjct: 339 DMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-GVQPNLLIYNAVINALCK 397
Query: 212 NGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+G + AE ++K +E+ PD +I G C LD A ++ +M + G E TV
Sbjct: 398 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 457
Query: 271 YNCILDCVSKLCRKKDPFRLDSE----------------------------AEKVLLDME 302
Y+ +++ + R + F L E A ++ +DM+
Sbjct: 458 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 517
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G NV T+ LIS LC + AI LF+RM G PN T+ LI L + R+
Sbjct: 518 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 577
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+++ M G Y E + C + ++AM V M GH+ + TY+ ++
Sbjct: 578 YAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 637
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+C A + D +R+G KP E+
Sbjct: 638 KGYCDSGNTTSALRILD-LMRDG-GCKPDEW 666
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
+G T L + M RD G K D+ S ++ C+ A L + ++ + P++
Sbjct: 643 SGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 701
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
LI G+C D KLD A L M R G YN ++ ++K ++ F E
Sbjct: 702 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK----QNNFSGAEEL 757
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
KV+++ G+ NV T+ +I LCK + A+++F +M E GC PN T+ LI++
Sbjct: 758 CKVMIE---EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 814
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L Q +V E + + ++ G + Y + + ++E A + +M G P
Sbjct: 815 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 874
Query: 415 SETYDLLM 422
TY +L+
Sbjct: 875 LWTYGVLI 882
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 26/300 (8%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
+ A+ + LV+N+ + K ++ + R G T ++ + E M + Y D LV+
Sbjct: 563 YNALINILVENRRI---KYAFVVLNLMGRNGLFTNIVTYNE-MIKGYCILGDPKKAMLVM 618
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ + G+++ LV T N I IKG+C G A R+ M GG +
Sbjct: 619 NNMLQRGHSA---NLV--TYNTI----------IKGYCDSGNTTSALRILDLMRDGGCKP 663
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+Y ++ K+ + + F L +E M +G+ N T+ LI CK +
Sbjct: 664 DEWSYTELICGFCKISKMESAFGLFNE-------MVDDGLCPNEVTYTALIDGYCKDEKL 716
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+ A L M GC PN T+ VLI L + +E+ M G Y
Sbjct: 717 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 776
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LC A+ +F KM G P+ TY L+ +V++A LF E R+G+
Sbjct: 777 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 836
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 118/326 (36%), Gaps = 33/326 (10%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+VD+ T + ID + + E M+R G + + + +++ L +
Sbjct: 691 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS-GCRPNVQTYNVLIHGLTKQN 749
Query: 214 YASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
S AE+L K E IFP+ +I G C +G + LA EM+ E G +
Sbjct: 750 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG----STSLALEMFNKMIEQGCLPN- 804
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
L S L R EAE + ++E +G+ + T+ +I + E A
Sbjct: 805 --LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 862
Query: 333 FYRMGEWGCHPNETTFLVLIKSL------------------------YQAARVGEGDEMI 368
RM + GC P T+ VLIK L YQ M
Sbjct: 863 LGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMS 922
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
++ + + ++ L R +A + M + G PD E Y+ L+
Sbjct: 923 AKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 982
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYR 454
VD A +F G EV Y+
Sbjct: 983 RNVDLAMGVFKHMSTQGCEVHLNGYK 1008
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 298 LLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
LDM +G+ + ++ L+ +L ++ + + ++RM G PN + +I +L
Sbjct: 337 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 396
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ V + + ++ ++ + + Y + C ++ A+ VF +M +G P++
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
TY L+ C RV++A L E + +G+
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGI 486
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 121/322 (37%), Gaps = 36/322 (11%)
Query: 119 HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGR 178
H LT+ NFS +E + + I +V T + ID L + G
Sbjct: 743 HGLTKQNNFSGAEELCKVMIE--------EGIFPNVV---------TYTAMIDGLCKNGS 785
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICD 237
+ L F +M + G + + ++ L + G AE L + + + PD+
Sbjct: 786 TSLALEMFNKM-IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 844
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV--------SKLCRKKDPF- 288
+I+ + + GK++ A M + G + Y ++ + +L D
Sbjct: 845 KMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVP 904
Query: 289 -------RLDSEAEKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
D +A V+ P +V+ N L+SNL R +A +L M G
Sbjct: 905 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 964
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P++ + L+ SL + V + M + G + Y E + LC + R ++A
Sbjct: 965 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEAR 1024
Query: 401 SVFEKMKTDGHNPDSETYDLLM 422
FE M NPD +L+
Sbjct: 1025 ITFENMLMRTWNPDDVVQAVLI 1046
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 32/260 (12%)
Query: 205 VVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+NG S A E K P+ LI+ +GK++EA+ L E+ R G
Sbjct: 776 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 835
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL--- 320
+ Y +++ + + F L M G + T+ VLI L
Sbjct: 836 LIPDEITYVKMIEAYIMSGKVEHAFNF-------LGRMIKAGCQPTLWTYGVLIKGLKNE 888
Query: 321 -----------------CKI---RRSEDAIKLF-YRMGEWGCHPNETTFLVLIKSLYQAA 359
C +DA+ + ++ E + L+ +L A
Sbjct: 889 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 948
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R E +E++ M S G ++ Y L L + ++ AM VF+ M T G Y
Sbjct: 949 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 1008
Query: 420 LLMTKWCAHNRVDKANALFD 439
L+ C +R +A F+
Sbjct: 1009 ELICALCQLHRRKEARITFE 1028
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 9/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + L F+ ME G + + + ++ LC G S A +L+ D +
Sbjct: 58 IDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 116
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI + +GKL EA++L EM + + V Y+ + ++ C
Sbjct: 117 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL---INGFCMHD--- 170
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RLD EA+++ M +V T+N LI CK +R E+ +++F M + G N T+
Sbjct: 171 RLD-EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 229
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI+ L+QA E+ M S G Y L LC ++E+AM VFE ++
Sbjct: 230 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 289
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
P TY++++ C +V+ LF GV+
Sbjct: 290 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 328
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +++ G C G D A L +M +G E G + YN I+D + K D L
Sbjct: 14 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
E ME G+ NV T++ LIS LC R DA +L M E +P+ TF
Sbjct: 74 FKE-------METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI + + ++ E +++ D M Y + C +R+++A +FE M +
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY+ L+ +C + RV++ +F E + G+ Y +
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 29/305 (9%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D + +VV LC+ G A L+ K ++ P I + +I G C +D+A
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS-------------------- 292
L +EM G V Y+ ++ C+ R D RL S
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 293 --------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
EAEK+ +M + ++ T++ LI+ C R ++A ++F M C P+
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ LIK + RV EG E+ M G Y + L + A +F+
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI 464
+M +DG P+ TY+ L+ C + +++KA +F+ R+ +E Y + + K
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310
Query: 465 AVKKG 469
V+ G
Sbjct: 311 KVEDG 315
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 146/336 (43%), Gaps = 38/336 (11%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDY---------------------FGRRKDFKAIH 151
+L +N + + H D+ L+ F + +GR D +
Sbjct: 50 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 109
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD----SLRLVVE 207
+++ K T ++ ID V+ G+ + ++ M KR D + ++
Sbjct: 110 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-----VKRSIDPSIVTYSSLIN 164
Query: 208 KLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
C + A+++ + + FPD + LIKG+C +++E + REM + G
Sbjct: 165 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 224
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
TV YN + + L + D A+++ +M +GVP N+ T+N L+ LCK +
Sbjct: 225 NTVTYNIL---IQGLFQAGDC----DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 277
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
E A+ +F + P T+ ++I+ + +A +V +G ++ + G Y
Sbjct: 278 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 337
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ C E+A ++F++MK DG P+S Y+ L+
Sbjct: 338 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 19/241 (7%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R + K + +F+V T + I + R + + F M + G + +
Sbjct: 171 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTY 229
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYR 261
++++ L + G A+++ K+ ++ P + + + L+ G C +GKL++A + + R
Sbjct: 230 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 289
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
E YN +++ + K + +D + L ++ GV +V +N +IS C
Sbjct: 290 SKMEPTIYTYNIMIEGMCKAGKVEDGWDL-------FCNLSLKGVKPDVVAYNTMISGFC 342
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD-----EMIDRMKSAGY 376
+ E+A LF M E G PN + LI+ AR+ +GD E+I M+S G+
Sbjct: 343 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIR-----ARLRDGDREASAELIKEMRSCGF 397
Query: 377 A 377
A
Sbjct: 398 A 398
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%)
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ L RM GC P+ T+ V++ L + ++++M+ G Y +
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
LC + ++ A+++F++M+T G P+ TY L++ C + R A+ L + +
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 113
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 62/147 (42%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G ++ T+ V+++ LCK ++ A L +M + P + +I L +
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + + M++ G Y ++ LC R A + M NPD T+
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ + ++ +A L+DE V+ ++
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSID 153
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 137/306 (44%), Gaps = 12/306 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
GR K+ I L ++ V+ + I+ ++G + L R+ +
Sbjct: 117 IGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEAL----RVLDHTSVAPNAA 172
Query: 201 SLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ V+ LC+ G A +++ + ++ +PD C +LI C + + +A +L EM
Sbjct: 173 TYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEM 232
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G + V YN + + C++ RLD EA L + G +V + N+++ +
Sbjct: 233 RGKGCKPDVVTYNVL---IKGFCKEG---RLD-EAIIFLKKLPSYGCQSDVISHNMILRS 285
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LC R DA+KL M GC P+ TF +LI L Q +G+ +++ M G+
Sbjct: 286 LCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 345
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ + + C + I++A+ E M + G PD TY++L+T C +VD A +
Sbjct: 346 SRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 405
Query: 440 EAVRNG 445
+ G
Sbjct: 406 QLSSKG 411
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 13/284 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
L S DR G+ Q + +R + + D + ++++ C+ A KL +
Sbjct: 177 VLCSLCDR----GKLKQAMQVLDRQLQSKCYP-DVVTCTVLIDATCKESGVGQAMKLFNE 231
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD ++LIKG+C +G+LDEA +++ G + +++N IL + R
Sbjct: 232 MRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGR 291
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D A K+L M G +V TFN+LI+ LC+ A+ + M + G P
Sbjct: 292 WMD-------AMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTP 344
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N +F LI+ + E ++ M S G Y LT LC +++ A+ +
Sbjct: 345 NSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 404
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++ + G +P +Y+ ++ + + A L +E G++
Sbjct: 405 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLK 448
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 12/329 (3%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGF 185
N + D L D G+ K + D + +K T ID + Q +
Sbjct: 170 NAATYDAVLCSLCDR-GKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 228
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWC 244
F M R G K D + ++++ C+ G A +K + D I +++++ C
Sbjct: 229 FNEM-RGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLC 287
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
G+ +A +L M R G V +N +++ LC+K L +A VL M +
Sbjct: 288 SGGRWMDAMKLLATMLRKGCFPSVVTFNILIN---FLCQKG----LLGKALNVLEMMPKH 340
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G N +FN LI C + + AI+ M GC+P+ T+ +L+ +L + +V +
Sbjct: 341 GHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 400
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ ++ S G + Y + L + + E A+ + E+M G PD T ++
Sbjct: 401 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 460
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+V +A F G +KP +
Sbjct: 461 LSREGKVHEAIKFFH--YLKGFGIKPNAF 487
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ LCR L+ E + L M G +V LI CKI R+++A ++ +
Sbjct: 73 IHHLCRLIRNGELE-EGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILE 131
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E G + ++ VLI + ++ + E ++D A A Y L LC +++
Sbjct: 132 ESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSVAPNA---ATYDAVLCSLCDRGKLK 188
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
QAM V ++ PD T +L+ C + V +A LF+E G + Y V
Sbjct: 189 QAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNV 246
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 30/235 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-NGYASYAEKLVKDTANE 228
I+ L + G + L E M + +G + S +++ C G E L +
Sbjct: 318 INFLCQKGLLGKALNVLEMMPK-HGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRG 376
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR----- 283
+PD ++L+ C DGK+D+A + ++ G ++YN ++D + K+ +
Sbjct: 377 CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAV 436
Query: 284 -----------KKDPFRLDS------------EAEKVLLDMEYNGVPRNVETFNVLISNL 320
K D S EA K ++ G+ N +N ++ L
Sbjct: 437 ELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGL 496
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
CK +++ AI M GC P E ++ LIK + E ++ + + S G
Sbjct: 497 CKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 25/289 (8%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDK 234
AG + ME+ G V LC++G A ++VK+ + PD
Sbjct: 31 AGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVV 90
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ LI G C G+LDEA+++ EM R GF V YN +++ +S R
Sbjct: 91 TFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR---------SG 141
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE-WGCHPNETTFLVLIK 353
E VL+ P + +T+N +I CK + A M + GC P+ T+ +LI
Sbjct: 142 EAVLVMQGMTTTP-DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKD-------YYEFLTRLCGIERIEQAMSVFEKM 406
L +++ + + DE++ M IG+KD + + C + +++A + M
Sbjct: 201 GLCKSSNLRKADELLQEM------IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSM 254
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G PD TY ++ C VDK AL ++ V G + Y V
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTV 303
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 10/275 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L +AGR + + MER GF + + ++ L G + A +++
Sbjct: 91 TFNTLIAGLCKAGRLDEAQQVLDEMERS-GFAANLVTYNTLINGLSSAGRSGEAVLVMQG 149
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCR 283
PD + + +I G+C G++D A EM R G T Y+ + ++ LC+
Sbjct: 150 MTTT--PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSIL---INGLCK 204
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + D ++++ +V FN L+ CK + + A +L M E GC P
Sbjct: 205 SSNLRKADELLQEMI---GRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAP 261
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +I L + V +G ++++M S G Y +T LC ++ +A +
Sbjct: 262 DVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLV 321
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
++M DG P++ TY L+ C +++D AN L
Sbjct: 322 KRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLL 356
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 20/250 (8%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + I ++G + GF E M++ G D + +++ LC++ A++L++
Sbjct: 157 QTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ 216
Query: 224 DTANEIFPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
E+ C + L+ G+C LD A+ L M G V Y+ I+D
Sbjct: 217 ----EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIID- 271
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LCR D + + EK M G +V T+ VL++ LCK + +A +L RM
Sbjct: 272 --GLCRCGDVDKGFALLEK----MVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRML 325
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E GC PN T+ ++ L + ++ ++++ ++ G D F T L +++
Sbjct: 326 EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRV---TDVVAFETLLLSVKKRL 382
Query: 398 QAMSVFEKMK 407
+ F+K K
Sbjct: 383 LDRAAFQKWK 392
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ L AGR + + + M D + ++ C++G A +++
Sbjct: 131 INGLSSAGRSGEAVLVMQGMTT----TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRA 186
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY-RGGFELGTVAYNCILDCVSKLCRKKD 286
PD +LI G C L +A L +EM R VA+N ++D C+ +D
Sbjct: 187 GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD---GYCKAQD 243
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R A ++L M +G +V T++ +I LC+ + L +M GC P+
Sbjct: 244 LDR----ARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVV 299
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ VL+ L +A ++ E ++ RM G Y LC I++++ A + +
Sbjct: 300 TYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359
Query: 407 KTDGHNPDSETYDLLM 422
+ G D ++ L+
Sbjct: 360 RDKGRVTDVVAFETLL 375
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRK-KDPFRLDSEAE 295
+L++ C+ G+L A L REM + G YN V LC+ K P EA
Sbjct: 23 VLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFF---VHALCKSGKVP-----EAM 74
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+V+ +M+ +V TFN LI+ LCK R ++A ++ M G N T+ LI L
Sbjct: 75 EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT-DGHNPD 414
A R GE ++ M + + Y + C I++A E+MK G +PD
Sbjct: 135 SSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAV 442
+ TY +L+ C + + KA+ L E +
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMI 219
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 294 AEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A +L +ME G+ +N + LCK + +A+++ M + C P+ TF LI
Sbjct: 37 AMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLI 96
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L +A R+ E +++D M+ +G+A Y + L R +A+ V + M T
Sbjct: 97 AGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---T 153
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEA-VRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
PD++TY+ ++ +C +D+A +E R G Y + L K ++K
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKAD- 212
Query: 472 RETLPEKMARK 482
E L E + RK
Sbjct: 213 -ELLQEMIGRK 222
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 8/283 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + G + F ++ R +K + + ++ C+ S AE L +
Sbjct: 938 THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFER 997
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI G C G +A L M GF T YN I+D + K R
Sbjct: 998 MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGR 1057
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ F+L + + +E +GV T+ +LIS CK A+ +M + G P
Sbjct: 1058 AEEAFKLLNTGFQN--QIEADGV-----TYTILISEQCKRADMNQALVFLNKMFKVGFQP 1110
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + LI + + + + +++ D + G A K+ Y + C +++ A+ F
Sbjct: 1111 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFF 1170
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+KM G PDS +Y L++ C +R+D+A L+D + G+
Sbjct: 1171 QKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 1213
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 114/303 (37%), Gaps = 44/303 (14%)
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCV 245
E MER GF D +L L++ CE + A K T + P+ +I G C
Sbjct: 856 EMMER--GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCK 913
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G + +A L EM + G++ + ++ + K + FRL L + +
Sbjct: 914 RGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL------FLKLIRSDN 967
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
NV T+ +IS CK + A LF RM E G PN T+ LI +A +
Sbjct: 968 YKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 1027
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE---------------------------- 397
E+++ M + G+ Y + LC R E
Sbjct: 1028 ELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 1087
Query: 398 -------QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
QA+ KM G PD Y L+ +C N + + LFDE ++ G+
Sbjct: 1088 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 1147
Query: 451 KEY 453
+ Y
Sbjct: 1148 ETY 1150
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 136/341 (39%), Gaps = 15/341 (4%)
Query: 121 LTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPT 180
L N E + F K D ++D + G ++R++
Sbjct: 751 LVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRN-QGLVLTTRVMNRIILVAAEM 809
Query: 181 QVLGF----FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKI 235
+++ + F+ M G D + + ++ C NG A++ + + F D+
Sbjct: 810 RLVEYAGNVFDEMSAR-GVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNAT 868
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
L+I +C ++ A ++ + G + Y+ + +S LC++ +A
Sbjct: 869 LTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSM---ISGLCKRGSV----KQAF 921
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIKS 354
++L +M NG NV T LI LCK +E A +LF ++ + PN T+ +I
Sbjct: 922 ELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISG 981
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ ++ + + +RMK G Y + C +A + E M +G P+
Sbjct: 982 YCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPN 1041
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ TY+ ++ C R ++A L + +N +E Y +
Sbjct: 1042 TCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 1082
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
FERM ++ G + ++ +++ C+ G S A +L++ +NE FP+ + ++ G
Sbjct: 994 LFERM-KEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 1052
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G+ +EA +L ++ E V Y + +S+ C++ D ++A L M
Sbjct: 1053 CKRGRAEEAFKLLNTGFQNQIEADGVTYTIL---ISEQCKRADM----NQALVFLNKMFK 1105
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G ++ + LI+ C+ +D+ KLF + + G P + T+ +I + +V
Sbjct: 1106 VGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSL 1165
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ +M G A Y ++ LC R+++A +++ M G +P T L
Sbjct: 1166 AVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTY 1225
Query: 424 KWC 426
++C
Sbjct: 1226 EYC 1228
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 165/396 (41%), Gaps = 50/396 (12%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQN--ANFSHTDETLSFFTDYFGRRKDFK 148
S V TP + +S L AG F W + +HT + + + ++
Sbjct: 64 SGVRVTPEIAESVLKHLDNAGMLAYRFFEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQ 123
Query: 149 AIHDF--LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
+ D ++ + V +T + + RA + + + F ME+ YG + + ++
Sbjct: 124 LMWDVVAIMRKEGVANVETFGIIMRKYARAQKLDEAVYTFNVMEK-YGVAHNLAAFNSLL 182
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC++ A+++ N PD K +L++GW L + + + +M G +
Sbjct: 183 SALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQP 242
Query: 267 GTVAYNCILDCVSK-------LCRKKD------------------PFRLD---SEAEKVL 298
V Y ++D + K +C +D + +D +A
Sbjct: 243 DIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAF 302
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
LDME +G+ +V +N LI+ CK+++ E+A ++ M G PN T+ +++ +L
Sbjct: 303 LDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLIS- 361
Query: 359 ARVGEGDE-------MIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDG 410
+G+ DE MI R K D Y + ++ C ++IE A+ V++ M+
Sbjct: 362 --LGKDDEAYRVFRSMIKRCKP------DSDTYTMMIKMFCENDKIEMALKVWKYMRLKQ 413
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P T+ +L+ C V +A L ++ + G+
Sbjct: 414 FLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGI 449
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD + + LI +C K + A R+ +M G + +N IL+ + L + + +
Sbjct: 310 IMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAY 369
Query: 289 RL----------DSEAEKVLLDM--------------EYNGVPR---NVETFNVLISNLC 321
R+ DS+ +++ M +Y + + ++ TF+VLI+ LC
Sbjct: 370 RVFRSMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLC 429
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
A L M E G P +TF L + L + R D ++++MK
Sbjct: 430 DKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMK 480
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 25/289 (8%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDK 234
AG + ME+ G V LC++G A ++VK+ + PD
Sbjct: 31 AGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVV 90
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ LI G C G+LDEA+++ EM R GF V YN +++ +S R
Sbjct: 91 TFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR---------SG 141
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE-WGCHPNETTFLVLIK 353
E VL+ P + +T+N +I CK + A M + GC P+ T+ +LI
Sbjct: 142 EAVLVMQGMTTTP-DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKD-------YYEFLTRLCGIERIEQAMSVFEKM 406
L +++ + + DE++ M IG+KD + + C + +++A + M
Sbjct: 201 GLCKSSNLRKADELLQEM------IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSM 254
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G PD TY ++ C VDK AL ++ V G + Y V
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTV 303
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 10/275 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L +AGR + + MER GF + + ++ L G + A +++
Sbjct: 91 TFNTLIAGLCKAGRLDEAQQVLDEMERS-GFAANLVTYNTLINGLSSAGRSGEAVLVMQG 149
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCR 283
PD + + +I G+C G++D A EM R G T Y+ + ++ LC+
Sbjct: 150 MTTT--PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSIL---INGLCK 204
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + D ++++ +V FN L+ CK + + A +L M E GC P
Sbjct: 205 SSNLRKADELLQEMI---GRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAP 261
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +I L + V +G ++++M S G Y +T LC ++ +A +
Sbjct: 262 DVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLV 321
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
++M DG P++ TY L+ C +++D AN L
Sbjct: 322 KRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLL 356
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRK-KDPFRLDSEAE 295
+L++ C+ G+L A L REM + G YN V LC+ K P EA
Sbjct: 23 VLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFF---VHALCKSGKVP-----EAM 74
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+V+ +M+ +V TFN LI+ LCK R ++A ++ M G N T+ LI L
Sbjct: 75 EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT-DGHNPD 414
A R GE ++ M + + Y + C I++A E+MK G +PD
Sbjct: 135 SSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAV 442
+ TY +L+ C + + KA+ L E +
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMI 219
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ L AGR + + + M D + ++ C++G A +++
Sbjct: 131 INGLSSAGRSGEAVLVMQGMTT----TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRA 186
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY-RGGFELGTVAYNCILDCVSKLCRKKD 286
PD +LI G C L +A L +EM R VA+N ++D C+ +D
Sbjct: 187 GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD---GYCKAQD 243
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R A ++L M +G +V T++ +I LC+ + L +M GC P+
Sbjct: 244 LDR----ARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVV 299
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ VL+ L +A ++ E ++ RM G Y LC I++++ A + +
Sbjct: 300 TYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359
Query: 407 KTDGHNPDSETYDLLM 422
+ G D ++ L+
Sbjct: 360 RDKGRITDVVAFEALL 375
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + I ++G + GF E M++ G D + +++ LC++ A++L++
Sbjct: 157 QTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ 216
Query: 224 DTANEIFPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
E+ C + L+ G+C LD A+ L M G V Y+ I+D
Sbjct: 217 ----EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIID- 271
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LCR D + + EK M G +V T+ VL++ LCK + +A +L RM
Sbjct: 272 --GLCRCGDVDKGFALLEK----MVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRML 325
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
E GC PN T+ ++ L + ++ ++++ ++ G
Sbjct: 326 EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 294 AEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A +L +ME G+ +N + LCK + +A+++ M + C P+ TF LI
Sbjct: 37 AMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLI 96
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L +A R+ E +++D M+ +G+A Y + L R +A+ V + M T
Sbjct: 97 AGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---T 153
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEA-VRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
PD++TY+ ++ +C +D+A +E R G Y + L K ++K
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKAD- 212
Query: 472 RETLPEKMARK 482
E L E + RK
Sbjct: 213 -ELLQEMIGRK 222
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 115/264 (43%), Gaps = 11/264 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ID R G+ + G F M + G + D + ++ C +G A KL D
Sbjct: 296 TFNVLIDAFCRKGKMIEAQGMFNLMVKR-GQQPDIVTFNTLISGHCLHGNVLEARKLF-D 353
Query: 225 TANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
T E I PD +LI G+C ++DEA L EM L V Y+ ++D + K
Sbjct: 354 TVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSG 413
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R + L S +G P NV T+N+LI CKI+ + I+LF M G
Sbjct: 414 RISYAWELFSTINN-------DGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLT 466
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P T+ +LI ++ R+ E ++ M+S A Y LC RI A +
Sbjct: 467 PTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWEL 526
Query: 403 FEKMKTDGHNPDSETYDLLMTKWC 426
F+ M G D TY++L+ +C
Sbjct: 527 FKVMHVGGPPVDVATYNVLLDAFC 550
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 157/402 (39%), Gaps = 14/402 (3%)
Query: 59 PDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFN 118
P + ++ G +++ ++ P+ IS ++F VTP+ + +N G F+
Sbjct: 82 PSVIQFNTIIGSVVK-MKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFS 140
Query: 119 HW-LTQNANFSHTDETLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV 174
+ + + TL+ G + HD + +L + I+ L
Sbjct: 141 VLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLC 200
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDD 233
+ GR + ME K + ++++ C++ A L +K I PD
Sbjct: 201 KIGRSIDAFQLLQEMEGQV-VKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDI 259
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
LI+G+C G+ E K+L EM +N ++D CRK E
Sbjct: 260 LTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID---AFCRKGKMI----E 312
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A+ + M G ++ TFN LIS C +A KLF + E G P+ ++ +LI
Sbjct: 313 AQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 372
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ R+ E + + M+ + Y + LC RI A +F + DG P
Sbjct: 373 GYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPP 432
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ TY++L+ +C +D LF G+ Y +
Sbjct: 433 NVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNI 474
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC++G SYA +L N+ P + I ++LI +C +D L + M G
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464
Query: 264 FELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
+ YN +++ C SK R EA +L M+ + + T+N L LC
Sbjct: 465 LTPTVLTYNILINGYCKSKRIR---------EAMNLLSVMQSKNLAPDSITYNSLFDGLC 515
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
K R DA +LF M G + T+ VL+ + +A V
Sbjct: 516 KSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 556
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 147/315 (46%), Gaps = 13/315 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ + +V + T + ++ + + G L +ME + K D
Sbjct: 235 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVI 293
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++++LC++G+ S A+ L + + I P+ + +I G+C G+ +A+RL R+M
Sbjct: 294 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 353
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ +N + +S ++ F EAEK+ +M + + + T+N +I
Sbjct: 354 EREINPDVLTFNAL---ISASVKEGKLF----EAEKLCDEMLHRCIFPDTVTYNSMIYGF 406
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R +DA +F M P+ TF +I +A RV EG +++ + G
Sbjct: 407 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 462
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++ + A +F++M + G PD+ T ++L+ +C + ++++A LF+
Sbjct: 463 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 522
Query: 441 AVRNGVEVKPKEYRV 455
+ +++ Y +
Sbjct: 523 IQMSKIDLDTVAYNI 537
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 9/214 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID RA R + + + R G + + ++ CE + A+ L ++
Sbjct: 429 TFNTIIDVYCRAKRVDEGMQLLREISR-RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 487
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + PD C++L+ G+C + KL+EA L + +L TVAYN I + +C+
Sbjct: 488 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII---IHGMCK 544
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++D EA + + +GV +V+T+NV+IS C DA LF++M + G P
Sbjct: 545 GS---KVD-EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 600
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ +T+ LI+ +A + + E+I M+S G++
Sbjct: 601 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 634
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 34/331 (10%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ IDRL + G + F M + G + + +++ C G S A++L++D
Sbjct: 295 SAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 353
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL---------- 275
EI PD + LI +GKL EA++L EM TV YN ++
Sbjct: 354 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 413
Query: 276 ------------------DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
+ CR K R+D E ++L ++ G+ N T+N LI
Sbjct: 414 DAKHMFDLMASPDVVTFNTIIDVYCRAK---RVD-EGMQLLREISRRGLVANTTTYNTLI 469
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C++ A LF M G P+ T +L+ + ++ E E+ + ++ +
Sbjct: 470 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 529
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y + +C ++++A +F + G PD +TY+++++ +C + + AN L
Sbjct: 530 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 589
Query: 438 FDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
F + NG E Y R K + K
Sbjct: 590 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 620
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 7/215 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + +I +C ++DE +L RE+ R G T YN + + C +
Sbjct: 425 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL---IHGFCEVDNL--- 478
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ A+ + +M +GV + T N+L+ C+ + E+A++LF + + + +
Sbjct: 479 -NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 537
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I + + ++V E ++ + G + Y ++ CG I A +F KMK +G
Sbjct: 538 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 597
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
H PD+ TY+ L+ +DK+ L E NG
Sbjct: 598 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 632
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 152/430 (35%), Gaps = 100/430 (23%)
Query: 97 PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD 156
PSL Q T F E + G +H+ F D+ + FF DY R + F VD
Sbjct: 63 PSLTQVT--FEGEELKLKSG-SHY------FKSLDDAIDFF-DYMVRSRPFYTA----VD 108
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME-------------------------- 190
+V+G VR RP + + +ME
Sbjct: 109 CNKVIGV---------FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSF 159
Query: 191 --------RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK---------DTANEI--FP 231
GF+ D + ++ LC S A L D EI P
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTP 219
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL- 290
+ LI G C++G++ EA L +M G + V Y I++ + K+ K L
Sbjct: 220 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 279
Query: 291 ---------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
S+A+ + +M G+ NV T+N +I C
Sbjct: 280 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 339
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R DA +L M E +P+ TF LI + + ++ E +++ D M Y
Sbjct: 340 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 399
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C R + A +F+ M + PD T++ ++ +C RVD+ L E R
Sbjct: 400 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 455
Query: 444 NGVEVKPKEY 453
G+ Y
Sbjct: 456 RGLVANTTTY 465
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 149/363 (41%), Gaps = 30/363 (8%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL---VDNKEVLGPKTLASCI- 170
L F +W+ SHT ET +R+ FK+ L +++ + P L +
Sbjct: 99 LEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLL 158
Query: 171 --DRLVRAGRPTQVLGF---------------FERMERDYGFKRDKDSLRLVVEKLCENG 213
RL + L F F RM +DYGF +S + L
Sbjct: 159 YSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRM-KDYGFLPTVESCNAYLSSLLNFS 217
Query: 214 YASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A ++ + I+P+ +L+I C G+LD+A + EM GF +YN
Sbjct: 218 RGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYN 277
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+ ++ C K L S A K+ ME NGVP +V TFN L++ CK+ + ++A KL
Sbjct: 278 TL---IAGYCNKG----LLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKL 330
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M P T+ +LI +A G+ + + M Y + LC
Sbjct: 331 FGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCK 390
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+ ++A + ++ G P++ T+ L+ C + ++A ++ +++ +
Sbjct: 391 EGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQT 450
Query: 453 YRV 455
+R+
Sbjct: 451 FRM 453
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 125/306 (40%), Gaps = 12/306 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASC---IDRLVRAGRPTQVLGFFERMERDYGFKR 197
F K F+ D K+ T+ SC + L+ R L F+ M R +
Sbjct: 178 FAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYP- 236
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLA 256
+ +L LV+ C+ G A + ++ F P+ + LI G+C G L A +L
Sbjct: 237 NSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLR 296
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M + G V +N +++ K+ + + EA K+ +M+ + T+N+L
Sbjct: 297 SVMEKNGVPPDVVTFNTLVNGFCKVGKLQ-------EASKLFGEMKGMSLSPTTVTYNIL 349
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ K E +LF M + + T+ LI L + + + ++ + G
Sbjct: 350 INGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGL 409
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ + C ++ E+A +++ M P +T+ +L++ +C + D A
Sbjct: 410 VPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQ 469
Query: 437 LFDEAV 442
L +E +
Sbjct: 470 LLEEML 475
>gi|115460906|ref|NP_001054053.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|38344884|emb|CAD41907.2| OSJNBa0033G05.8 [Oryza sativa Japonica Group]
gi|113565624|dbj|BAF15967.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|125591829|gb|EAZ32179.1| hypothetical protein OsJ_16385 [Oryza sativa Japonica Group]
gi|215701473|dbj|BAG92897.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704877|dbj|BAG94905.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 151/362 (41%), Gaps = 29/362 (8%)
Query: 80 LPISQRLHLIFSHVTPTP------SLVQSTLNFSPEAGRAILGFNHWLTQ--NANFSHTD 131
LP S LH V TP + V TL+ R L F HW AN T
Sbjct: 11 LPFST-LHTPAGDVAATPPSPLDATAVLETLSLYANDWRRALEFFHWSASPDGANVPPTP 69
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKE-------VLGPKTLASCIDRLVRAGRPTQVLG 184
T++ D G+ +F LV + + L P L S ++RL A +
Sbjct: 70 ATVARAVDVLGKHFEFPLATSLLVSHHDPGRADPSFLRP-ALRSLLNRLAAANLIDDAIR 128
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD-DKICDLLIKGW 243
F+ G RD+ S +V+ LC++ A L FP K +LL++GW
Sbjct: 129 AFDSTAGSIGL-RDEASFHALVDALCDHRRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGW 187
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
++L +M G +Y+ +D ++K + F KV +M+
Sbjct: 188 AKTRAWARLRQLWFDMDSRGVAKDLHSYSIYMDALAKSGKPWKAF-------KVFKEMKQ 240
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ +V +N I ++ + + AI+L+ +M + GC PN +TF ++K L + R E
Sbjct: 241 KGMAIDVVAYNTAIHSVGLAQGVDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKE 300
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
G + +M G Y+ F L R ++ + +FEKM G P +TY +L+
Sbjct: 301 GYAFVQQMHKFGIEPNVLTYHCFFQYL---SRPQEVLGLFEKMLERGCRPRMDTYVMLIK 357
Query: 424 KW 425
++
Sbjct: 358 RF 359
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 10/214 (4%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D ++C L+ G C G+LD A L EM VA+ + ++ LCR+K RLD
Sbjct: 8 DTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVV---INGLCREK---RLD 58
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA VL G + T+NV I LCK R +DA +L +M E C P T+ L
Sbjct: 59 -EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTAL 117
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ L +A R+ E ++++M G + K Y + L R+E+A +F M +G
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 177
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD+ Y L++ ++D+A ++ V NG
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENG 211
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%), Gaps = 12/285 (4%)
Query: 165 TLASCIDRLVRAGRPTQ-VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T S +D ++ GR + +L E +ER GF D + +++ LC+ G +
Sbjct: 291 TYTSLVDGFLKLGRLDEALLQLKEAVER--GFIPDAVTYTSIIDGLCKLGRVEEGCERFH 348
Query: 224 DTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ N + PD LI G+ + +A R+ R+M + G + TV YN ILD + K
Sbjct: 349 EMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAG 408
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R +EA L ME G V T++ L+ C A++LF RM + GC
Sbjct: 409 RV-------AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE 461
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG-IERIEQAMS 401
PN ++ ++I+ L +A ++ + +++ + FL LC ++ + +
Sbjct: 462 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVE 521
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+FE M + G +P+ +Y +LM C ++ +F E V GV
Sbjct: 522 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGV 566
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 20/299 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L++AGR + + E+M + G + +V++ L + G A ++ D
Sbjct: 113 TYTALVDGLLKAGRLDEAMAILEQMV-EKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVD 171
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT----VAYNCILDCVS 279
N PD + LI G GKLDEA +M G G V +N + +
Sbjct: 172 MLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLV---IR 228
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+LC + E D + + TFN L++ LCK R+E+AI +M E
Sbjct: 229 QLCASGNL-----EDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSER 283
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA---GYAIGKKDYYEFLTRLCGIERI 396
C P T+ L+ + R+ DE + ++K A G+ Y + LC + R+
Sbjct: 284 RCFPTLFTYTSLVDGFLKLGRL---DEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRV 340
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
E+ F +M+ G+ PD+ TY L+ + + KA+ ++ + +++G V Y +
Sbjct: 341 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 399
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ LC+ G A L+ + PD ++I G C + +LDEA + R G
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEMPCS--PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGC 72
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
E V YN +D + K R D F+L + + E +P V T+ L+ L K
Sbjct: 73 EPDYVTYNVFIDGLCKAERVDDAFQLLKKMD------EKKCLPTTV-TYTALVDGLLKAG 125
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R ++A+ + +M E G P T+ V+I L +A RV E + M G Y
Sbjct: 126 RLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 185
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGH----NPDSETYDLLMTKWCAHNRVDKANALFDE 440
++ L I ++++A+ +M +G PD ++L++ + CA ++ A A FDE
Sbjct: 186 ALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE 245
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 43/365 (11%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + AI + +V+ KT ID L +AGR + F M + G + D
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGN-GCRPDAFV 183
Query: 202 LRLVVEKLCENG----YASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
++ L + G Y ++V++ A + PD I +L+I+ C G L++A
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYF 243
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKK----------------------------DPF 288
E+ +L +N + V+ LC+ + D F
Sbjct: 244 DEL-DDSLDLTHFTFNPL---VAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGF 299
Query: 289 ----RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
RLD ++ +E +P V T+ +I LCK+ R E+ + F+ M G P+
Sbjct: 300 LKLGRLDEALLQLKEAVERGFIPDAV-TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPD 358
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ LI +A + + + +M +G + Y L LC R+ +A + F
Sbjct: 359 AVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFL 418
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI 464
M+ G TY LM +C+ V A LF + G E Y + R L +
Sbjct: 419 AMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAG 478
Query: 465 AVKKG 469
+ K
Sbjct: 479 KLAKA 483
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 37/281 (13%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
++ + V+ T +D L +AGR + F ME + G + +++ C G
Sbjct: 385 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME-ERGCVATVVTYSALMDGFCSEG 443
Query: 214 YASYAEKLVK---DTANEIFPDDKICDLLIKGWCVDGKLDEA---------KRLAREMYR 261
S A +L + D E P+ +++I+G C GKL +A +RL ++Y
Sbjct: 444 NVSAAVELFRRMLDRGCE--PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY- 500
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL--DMEYNGVPRNVETFNVLISN 319
+N L LC+ RLD+ + V L M G N+ ++++L+
Sbjct: 501 --------TFNSFL---HGLCQ-----RLDTVGDGVELFESMVSQGTSPNLHSYSILMDG 544
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+C+ E +++F+ M G P+ F LI+ L A RV E E+ ++ A
Sbjct: 545 ICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APD 603
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
Y+ L L ER+E+A + MK G P YDL
Sbjct: 604 AWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP--RHYDL 642
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
L++ LCK + + A+ L + E C P+ F V+I L + R+ E +++R
Sbjct: 13 TALLNGLCKTGQLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
AG Y F+ LC ER++ A + +KM P + TY L+ R+D+
Sbjct: 70 AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129
Query: 434 ANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
A A+ ++ V G K Y V L K V++ ++
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARR 167
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 147/315 (46%), Gaps = 13/315 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ + +V + T + ++ + + G L +ME + K D
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVI 298
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++++LC++G+ S A+ L + + I P+ + +I G+C G+ +A+RL R+M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ +N + +S ++ F EAEK+ +M + + + T+N +I
Sbjct: 359 EREINPDVLTFNAL---ISASVKEGKLF----EAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R +DA +F M P+ TF +I +A RV EG +++ + G
Sbjct: 412 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++ + A +F++M + G PD+ T ++L+ +C + ++++A LF+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 441 AVRNGVEVKPKEYRV 455
+ +++ Y +
Sbjct: 528 IQMSKIDLDTVAYNI 542
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 12/240 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID RA R + + + R G + + ++ CE + A+ L ++
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + PD C++L+ G+C + KL+EA L + +L TVAYN I + +C+
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII---IHGMCK 549
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++D EA + + +GV +V+T+NV+IS C DA LF++M + G P
Sbjct: 550 GS---KVD-EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY---AIGKKDYYEFLTRLCGIERIEQAM 400
+ +T+ LI+ +A + + E+I M+S G+ A K E + R+ E IE +
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYL 665
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 34/331 (10%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ IDRL + G + F M + G + + +++ C G S A++L++D
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL---------- 275
EI PD + LI +GKL EA++L EM TV YN ++
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 276 ------------------DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
+ CR K R+D E ++L ++ G+ N T+N LI
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAK---RVD-EGMQLLREISRRGLVANTTTYNTLI 474
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C++ A LF M G P+ T +L+ + ++ E E+ + ++ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y + +C ++++A +F + G PD +TY+++++ +C + + AN L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 438 FDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
F + NG E Y R K + K
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 7/215 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + +I +C ++DE +L RE+ R G T YN + + C +
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL---IHGFCEVDNL--- 483
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ A+ + +M +GV + T N+L+ C+ + E+A++LF + + + +
Sbjct: 484 -NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I + + ++V E ++ + G + Y ++ CG I A +F KMK +G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
H PD+ TY+ L+ +DK+ L E NG
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 154/435 (35%), Gaps = 105/435 (24%)
Query: 97 PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD 156
PSL Q T F E + G +H+ F D+ + FF DY R + F VD
Sbjct: 63 PSLTQVT--FEGEELKLKSG-SHY------FKSLDDAIDFF-DYMVRSRPFYTA----VD 108
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME-------------------------- 190
+V+G VR RP + + +ME
Sbjct: 109 CNKVIGV---------FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSF 159
Query: 191 --------RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD-----DKICD 237
GF+ D + ++ LC S A L F + D++ +
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 238 L-----------LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ LI G C++G++ EA L +M G + V Y I++ + K+ K
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 287 PFRL----------------------------DSEAEKVLLDMEYNGVPRNVETFNVLIS 318
L S+A+ + +M G+ NV T+N +I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C R DA +L M E +P+ TF LI + + ++ E +++ D M
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C R + A +F+ M + PD T++ ++ +C RVD+ L
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 439 DEAVRNGVEVKPKEY 453
E R G+ Y
Sbjct: 456 REISRRGLVANTTTY 470
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 17/276 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-----YASYAEKLVKD 224
ID + + GR + M D G + S ++ LC +G +A +A+ ++
Sbjct: 251 IDGMCKEGRIEVAIKLLGEM-MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
I LIKG + GKL EA L + M + G E VAYN + + LC
Sbjct: 310 CDANIHTFTP----LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL---IHGLCSN 362
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
EA +V M+ +G NV T+++LI K A + + RM GC PN
Sbjct: 363 GSL----EEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ ++ L + + + + ++++M G + F+ LCG R+E AM + E
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLE 478
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+M+ G P+ TY+ L+ N+ ++A LF E
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 17/277 (6%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKL---CENGYASYAEKLVKDTANEIFPDDKIC 236
+ VLGFF + F+ + R+++E+L CE Y + +K D IC
Sbjct: 55 SSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC 114
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+I G+ G ++A ++ + G + YN +LD + ++ F++
Sbjct: 115 --IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDAL----LSENKFQM---INP 165
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+ +M+ +G+ NV T+N+L+ LCK R + A KLF M GC P+ T+ ++ SL
Sbjct: 166 LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+A ++ + E+ R K + Y + +C RIE A+ + +M +G +P+
Sbjct: 226 KAGKIDDARELAGRFKPS-----VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVV 280
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+Y ++ C V+ A ALF + G + +
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTF 317
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 155/371 (41%), Gaps = 50/371 (13%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNK--EVLGPKTLASC- 169
++LGF + + F HT T + GR + + L K + + L C
Sbjct: 56 SVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICI 115
Query: 170 IDRLVRAGRPTQVLGFFERME--------RDYGFKRD-------------------KDSL 202
I+ R G Q L F R+ R Y D KD L
Sbjct: 116 INGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGL 175
Query: 203 -------RLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKR 254
++++ LC+N A KL + +N+ P D + ++ C GK+D+A+
Sbjct: 176 IPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE 235
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
LA G F+ YN ++D +C++ R++ A K+L +M NGV NV +++
Sbjct: 236 LA-----GRFKPSVPVYNALID---GMCKEG---RIEV-AIKLLGEMMDNGVDPNVVSYS 283
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
+I++LC E A LF +M GC N TF LIK + ++ E ++ M
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G Y + LC +E+A+ V ++M+ G P+ TY +L+ + + A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 435 NALFDEAVRNG 445
+ ++ + +G
Sbjct: 404 SETWNRMISHG 414
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 38/283 (13%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G D + +V LC+ G A +L A P + + LI G C +G+++ A
Sbjct: 209 GCPPDAVTYTTMVSSLCKAGKIDDAREL----AGRFKPSVPVYNALIDGMCKEGRIEVAI 264
Query: 254 RLAREMYRGGFELGTVAYNCILD--CVS-----------------------------KLC 282
+L EM G + V+Y+CI++ CVS K C
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ EA + M +G NV +N LI LC E+A+++ +M GC
Sbjct: 325 FMRGKLY---EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL 381
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN TT+ +LI ++ + E +RM S G Y + LC +QA S+
Sbjct: 382 PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSL 441
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
EKM +G P++ T++ + C + RV+ A L + +G
Sbjct: 442 VEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 10/260 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + ID ++G + RM +G + + + +V+ LC+N A LV K
Sbjct: 386 TYSILIDGFAKSGDLVGASETWNRM-ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T P+ + IKG C +G+++ A +L M G YN +LD + ++ +
Sbjct: 445 MTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ F L E +E + N+ T+N ++ + +A++LF + G P
Sbjct: 505 YEEAFGLFQE-------IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAP 557
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG-YAIGKKDYYEFLTRLCGIERIEQAMSV 402
+ T+ +I + + +V ++++R+ S + Y + C IE+AM+
Sbjct: 558 DSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAF 617
Query: 403 FEKMKTDGHNPDSETYDLLM 422
+K G P+ T++ L+
Sbjct: 618 LDKAINQGICPNFATWNALV 637
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 120/303 (39%), Gaps = 37/303 (12%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKI 235
G+ + L ++ M +D G + + + ++ LC NG A ++ + P+
Sbjct: 328 GKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTT 386
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+LI G+ G L A M G V Y C++D LC+ + +S E
Sbjct: 387 YSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV---LCKNSMFDQANSLVE 443
Query: 296 KVLLD-------------------------------MEYNGVPRNVETFNVLISNLCKIR 324
K+ L+ M+ +G N+ T+N L+ L ++
Sbjct: 444 KMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ E+A LF + PN T+ ++ +A +GE ++ + G A Y
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYN 563
Query: 385 EFLTRLCGIERIEQAMSVFEKMKT-DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C +++ A + E++ + +PD TY L+ C +++A A D+A+
Sbjct: 564 TMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623
Query: 444 NGV 446
G+
Sbjct: 624 QGI 626
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 147/315 (46%), Gaps = 13/315 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ + +V + T + ++ + + G L +ME + K D
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVI 298
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++++LC++G+ S A+ L + + I P+ + +I G+C G+ +A+RL R+M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ +N + +S ++ F EAEK+ +M + + + T+N +I
Sbjct: 359 EREINPDVLTFNAL---ISASVKEGKLF----EAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R +DA +F M P+ TF +I +A RV EG +++ + G
Sbjct: 412 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++ + A +F++M + G PD+ T ++L+ +C + ++++A LF+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 441 AVRNGVEVKPKEYRV 455
+ +++ Y +
Sbjct: 528 IQMSKIDLDTVAYNI 542
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 9/214 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID RA R + + + R G + + ++ CE + A+ L ++
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISR-RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + PD C++L+ G+C + KL+EA L + +L TVAYN I + +C+
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII---IHGMCK 549
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++D EA + + +GV +V+T+NV+IS C DA LF++M + G P
Sbjct: 550 GS---KVD-EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ +T+ LI+ +A + + E+I M+S G++
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 34/331 (10%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ IDRL + G + F M + G + + +++ C G S A++L++D
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL---------- 275
EI PD + LI +GKL EA++L EM TV YN ++
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 276 ------------------DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
+ CR K R+D E ++L ++ G+ N T+N LI
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAK---RVD-EGMQLLREISRRGLVANTTTYNTLI 474
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C++ A LF M G P+ T +L+ + ++ E E+ + ++ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y + +C ++++A +F + G PD +TY+++++ +C + + AN L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 438 FDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
F + NG E Y R K + K
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 7/215 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + +I +C ++DE +L RE+ R G T YN + + C +
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL---IHGFCEVDNL--- 483
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ A+ + +M +GV + T N+L+ C+ + E+A++LF + + + +
Sbjct: 484 -NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I + + ++V E ++ + G + Y ++ CG I A +F KMK +G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
H PD+ TY+ L+ +DK+ L E NG
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 154/435 (35%), Gaps = 105/435 (24%)
Query: 97 PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD 156
PSL Q T F E + G +H+ F D+ + FF DY R + F VD
Sbjct: 63 PSLTQVT--FEGEELKLKSG-SHY------FKSLDDAIDFF-DYMVRSRPFYTA----VD 108
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME-------------------------- 190
+V+G VR RP + + +ME
Sbjct: 109 CNKVIGV---------FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSF 159
Query: 191 --------RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD-----DKICD 237
GF+ D + ++ LC S A L F + D++ +
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 238 L-----------LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ LI G C++G++ EA L +M G + V Y I++ + K+ K
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 287 PFRL----------------------------DSEAEKVLLDMEYNGVPRNVETFNVLIS 318
L S+A+ + +M G+ NV T+N +I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C R DA +L M E +P+ TF LI + + ++ E +++ D M
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C R + A +F+ M + PD T++ ++ +C RVD+ L
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 439 DEAVRNGVEVKPKEY 453
E R G+ Y
Sbjct: 456 REISRRGLVANTTTY 470
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 21/285 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYG--FKRDKD----SLRLVVEKLCENGYASYAEKLVK 223
+D LV+ GR F+ M + YG R + +++ C G A +L
Sbjct: 165 LDGLVKKGR-------FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFD 217
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + IFP I +LI+G C + ++ EA+ + R M G YN ++D K+
Sbjct: 218 EMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIA 277
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
K L E M +G+ NV TF +LI LCK A K M +G
Sbjct: 278 HVKKALELYQE-------MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN + LI +A + E + ++ Y + LCG++R+E+A +
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++MK G P++ TY+ L+ +C ++KA + + G+E
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIE 435
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 9/225 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G S A L + +EI PD +LIKG C +++EA L +EM + G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F V YN ++D C++ + +A +V M G+ N+ TF+ LI CK
Sbjct: 399 FLPNAVTYNTLID---GYCKEGNM----EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ E A+ L+ M G P+ + LI ++ E + M+ AG
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 384 YEFLTRLCGIERIEQAMSVF-EKMKTDGHNPDSETYDLLMTKWCA 427
+ LC RI A+ +F K TD + D + + C+
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCS 556
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 8/236 (3%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD 246
R R+ G + + +++ C+ + A +L ++ + + P+ +LI G C
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKT 311
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
++ A++ +M G YNC++D K + L SE EK + +
Sbjct: 312 DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK-------HEI 364
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T+++LI LC + R E+A L M + G PN T+ LI + + + E
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ +M G + + C ++E AM ++ +M G PD Y L+
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 242 GWCVDGKLDEAK----------------RLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
G+C +G+++EA L EM G + YN ++D LC +
Sbjct: 272 GFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLID---SLCYRG 328
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
EA +L +ME +G RNV T+N LI CK ++ E+A ++F +M G N
Sbjct: 329 KL----QEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNS 384
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L ++ RV E +++D+M G K Y LT C I++A + +
Sbjct: 385 VTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQT 444
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
M ++G PD TY L+ C RV+ A+ L G+ + P Y
Sbjct: 445 MTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAY 492
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 43/252 (17%)
Query: 206 VEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++++ G + A +L + N+ PD+ ++LI C GKL EA L REM G
Sbjct: 286 IDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGC 345
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ YN ++D C+ K EAE++ ME G+ RN T+N LI LCK R
Sbjct: 346 ARNVITYNTLID---GFCKNKKI----EEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSR 398
Query: 325 RSEDAIKL----------------------FYRMGEW-------------GCHPNETTFL 349
R ++A +L F R G+ GC P+ T+
Sbjct: 399 RVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYG 458
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI L +A RV ++ ++ G + Y + L +R ++AM +F +M+
Sbjct: 459 TLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEK 518
Query: 410 GHNPDSETYDLL 421
G+ PD+ TY ++
Sbjct: 519 GNTPDAFTYKIV 530
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 23/199 (11%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G L T+ YN +L+ + + +L E V M G+ +V TFN+LI LCK
Sbjct: 153 GLALDTLLYNFLLNVLVD----GNKLKL---VENVHSTMVSKGIKPDVSTFNILIKALCK 205
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ AI + M +G P+E TF L++ + + + ++M AG +
Sbjct: 206 AHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVT 265
Query: 383 YYEFLTRLCGIERIEQAMS----------------VFEKMKTDGHNPDSETYDLLMTKWC 426
+ C RIE+A+S ++ +MK G PD TY++L+ C
Sbjct: 266 VNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLC 325
Query: 427 AHNRVDKANALFDEAVRNG 445
++ +A L E +G
Sbjct: 326 YRGKLQEALGLLREMEISG 344
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 121/291 (41%), Gaps = 12/291 (4%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
+ +VL L +C RL VLG ++ G + + + ++ C G
Sbjct: 123 SHDVLSLTILINCFCRLCHVDYGFSVLGKIIKL----GLEPNVITFSTLINGFCIEGKIG 178
Query: 217 YAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A +L + P+ ++IKG C GK E +L M G E V YN I+
Sbjct: 179 RAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIV 238
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
D +LC+ RL +EA + M+ G+ V T+ LI L + R ++A L
Sbjct: 239 D---RLCKD----RLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNE 291
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M P+ F VLI + + V E ++ M G Y + C
Sbjct: 292 MKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRME 351
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ +A VFE M + G PD ++ +L+ +C R+D+A LFDE G+
Sbjct: 352 VVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL 402
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 137/324 (42%), Gaps = 46/324 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL---VKDTA 226
I L R G+ T+V+ E M + G + D +V++LC++ + A + +K T
Sbjct: 203 IKGLCRVGKTTEVIKLLEHM-KVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTG 261
Query: 227 ----------------------------NE-----IFPDDKICDLLIKGWCVDGKLDEAK 253
NE I PD +LI C +G++ EA+
Sbjct: 262 ILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEAR 321
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ + M G E YN +++ C + + EA KV M G +V +F
Sbjct: 322 VILKTMTEMGVEPDVATYNTLMN---GYCLRMEVV----EARKVFEVMISKGRMPDVFSF 374
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
++L++ CK +R ++A +LF M G P+ ++ LI L QA R E +E+ M S
Sbjct: 375 SILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHS 434
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
GY Y L L ++QAM +F M+ G PD TY++++ C + +
Sbjct: 435 NGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKD 494
Query: 434 ANALFDEAVRNGVEVKPKEYRVDP 457
A LF E G++ P + P
Sbjct: 495 ARELFAELSVKGLQ--PNNWVCTP 516
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 116/317 (36%), Gaps = 50/317 (15%)
Query: 138 TDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCI------DRLVRAGRPTQVLGFFERMER 191
+ Y + + F+ I+D L ++ L S + LVR V+ ++ME
Sbjct: 60 SSYRHKNRTFRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEM 119
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLD 250
G D SL +++ C + Y L K + P+ LI G+C++GK+
Sbjct: 120 A-GISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIG 178
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
A L M G++ NV
Sbjct: 179 RAIELFDVMVARGYK------------------------------------------PNV 196
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+++++I LC++ ++ + IKL M GC P+ + ++ L + V E + +
Sbjct: 197 HSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCK 256
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
MK G Y + L + R ++A + +MK PD + +L+ C
Sbjct: 257 MKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGE 316
Query: 431 VDKANALFDEAVRNGVE 447
V +A + GVE
Sbjct: 317 VSEARVILKTMTEMGVE 333
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 9/177 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ +A R + F+ M G D S ++ LC+ AE+L KD +
Sbjct: 378 VNGYCKAKRIDEAKQLFDEMTHR-GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNG 436
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+P + + +L+ G LD+A L R M G + V YN ++D + K + KD
Sbjct: 437 YPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKD-- 494
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
A ++ ++ G+ N I +CK ++A K F +M + C P +
Sbjct: 495 -----ARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 148/365 (40%), Gaps = 15/365 (4%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQ----NANFSHTDETLSFFTDYFGRRKDFKAIHDF 153
+LV + L+ A R F W + F+HT T G+ + F+++
Sbjct: 184 TLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVAL 243
Query: 154 L--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
+ + + L I AG +G FE M R +GF +S ++ L +
Sbjct: 244 IQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMM-RTHGFDDGVESFNCLLVALAQ 302
Query: 212 NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G A ++ + PD + L+ WC L EA R+ EM G + V +
Sbjct: 303 EGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVH 362
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N +++ + + R+ EA K+ M+ G NV T+ +LI + CK + + A++
Sbjct: 363 NTMIEGLLRGQRR-------PEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMR 415
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
F M + GC P+ T+ L+ A R+ +++ M G + Y + L
Sbjct: 416 CFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLT 475
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR-VDKANALFDEAVRNGVEVKP 450
+ A +++KM G P TY+++M + R A+++E R G+
Sbjct: 476 NRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDV 535
Query: 451 KEYRV 455
Y V
Sbjct: 536 NSYTV 540
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 18/266 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+ IK + G++ A + M GF+ G ++NC+L +++ L EA +V
Sbjct: 260 IAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQE-------GLGREANQV 312
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M P ++ ++ L+ C R +A +++ M E G P+ +I+ L +
Sbjct: 313 FDRMRDRYAP-DLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR 371
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
R E +M + MK+ G A Y + C +++ AM FE+M+ G PD T
Sbjct: 372 GQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVAT 431
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPE 477
Y L+ + R+D+ AL +E + G + Y A+ K +P+
Sbjct: 432 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYN----------ALIKLLTNRNMPD 481
Query: 478 KMARKRRRLKQIRLSFVKKPKRMMMR 503
AR +++ + L MMM+
Sbjct: 482 DAARIYKKMIKKGLEPTIHTYNMMMK 507
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
++ +D L + G+ ++ R +GF + ++ LC+ G AE L +
Sbjct: 332 AVSGLVDGLRKQGKIDDAYELVVKVGR-FGFVPNLFVYNALINSLCKGGDLDKAELLYSN 390
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ +LI +C G+LD A M + G AYN + ++ C+
Sbjct: 391 MSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSL---INGQCK 447
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D S AE + ++M GV TF LIS CK + + A KL+ +M + G P
Sbjct: 448 FGDL----SAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITP 503
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF LI L ++ E E+ D + + Y + C +I++A +
Sbjct: 504 NVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELL 563
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
E M G PD+ TY L++ C+ RV KA D+ + V++ Y
Sbjct: 564 EDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCY 613
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 7/216 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD C +++ C AK R M GF+L V YN + + LC+
Sbjct: 223 PDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVL---IHGLCKGDRV--- 276
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
SEA +V + G+ +V T+ L+ C++++ E I+L M E G P E
Sbjct: 277 -SEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSG 335
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ L + ++ + E++ ++ G+ Y + LC +++A ++ M
Sbjct: 336 LVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN 395
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P+ TY +L+ +C R+D A + FD +++G+
Sbjct: 396 LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGI 431
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 16/250 (6%)
Query: 204 LVVEKLCENG----YASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
++++ C +G SY +++++D E ++ + LI G C G L A+ L E
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS----LINGQCKFGDLSAAESLFIE 460
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M G E + ++ K + + F+L ++ M NG+ NV TF LIS
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNK-------MIDNGITPNVYTFTALIS 513
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC + +A +LF + E P E T+ VLI+ + ++ + E+++ M G
Sbjct: 514 GLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVP 573
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y ++ LC R+ +A + + + Y L+ +C R+ +A +
Sbjct: 574 DTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSAS 633
Query: 439 DEAVRNGVEV 448
E ++ G+ +
Sbjct: 634 CEMIQRGINM 643
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 131/312 (41%), Gaps = 24/312 (7%)
Query: 155 VDNKEVLGPKTLASCIDRLVRAGRPTQVLGF--FERMER---------DYGFKRDKDSLR 203
V+ K LG K LA+ + T VLGF ++ E + GF + ++
Sbjct: 280 VEVKRSLGGKGLAADV-----VTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVS 334
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+V+ L + G A +LV F P+ + + LI C G LD+A+ L M
Sbjct: 335 GLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLM 394
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
+ Y+ ++D CR RLD A M +G+ V +N LI+ CK
Sbjct: 395 NLRPNGITYSILID---SFCRSG---RLDV-AISYFDRMIQDGIGETVYAYNSLINGQCK 447
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
A LF M G P TTF LI + +V + ++ ++M G
Sbjct: 448 FGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYT 507
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ ++ LC ++ +A +F+++ P TY++L+ +C ++DKA L ++
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH 567
Query: 443 RNGVEVKPKEYR 454
+ G+ YR
Sbjct: 568 QKGLVPDTYTYR 579
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 9/259 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID R+GR + +F+RM +D G + ++ C+ G S AE L +
Sbjct: 402 TYSILIDSFCRSGRLDVAISYFDRMIQD-GIGETVYAYNSLINGQCKFGDLSAAESLFIE 460
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N+ + P LI G+C D ++ +A +L +M G + + +S LC
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTAL---ISGLCS 517
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+EA ++ ++ + T+NVLI C+ + + A +L M + G P
Sbjct: 518 TNKM----AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVP 573
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L RV + + ID + + + Y L C R+ +A+S
Sbjct: 574 DTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSAS 633
Query: 404 EKMKTDGHNPDSETYDLLM 422
+M G N D + +L+
Sbjct: 634 CEMIQRGINMDLVCHAVLI 652
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 121/314 (38%), Gaps = 45/314 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ R G+ + E M + G D + R ++ LC G S A+ + D +
Sbjct: 547 IEGYCRDGKIDKAFELLEDMHQK-GLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+++C L+ G+C +G+L EA + EM + G + V + ++D K +K F
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFF 665
Query: 289 RLDSEAEKVLLDMEYNGV-PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
L L DM G+ P NV + +I K + A + + M C PN T
Sbjct: 666 DL-------LKDMHDQGLRPDNV-IYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVT 717
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL----------------- 390
+ L+ L +A + + RM++A Y FL L
Sbjct: 718 YTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML 777
Query: 391 -----------------CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
C + R +A V +M +G PD TY L+ ++C V
Sbjct: 778 KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGA 837
Query: 434 ANALFDEAVRNGVE 447
+ L+D + G+E
Sbjct: 838 SVKLWDTMLNRGLE 851
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 92/235 (39%), Gaps = 50/235 (21%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
E FP+ L+ G C G++D A L + M ++ Y C LD ++K K+
Sbjct: 710 ECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEA 769
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
L K G+ N T N++I CK+ R +A K+ M E G P+ T
Sbjct: 770 IGLHHAMLK--------GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVT 821
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ LI ++ VG ++ D M L R
Sbjct: 822 YSTLIYEYCRSGNVGASVKLWDTM---------------LNR------------------ 848
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
G PD Y+LL+ C + +DKA L D+ +R G + P D +YL+K
Sbjct: 849 --GLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRG--IIP-----DNKYLQK 894
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M N + V T + L++ L K+R+ +LF G P+ T +++S+ +
Sbjct: 181 MFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKD 240
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E I M++ G+ + Y + LC +R+ +A+ V + G D TY
Sbjct: 241 FLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300
Query: 421 LMTKWCAHNRVDKANALFDEAVRNG 445
L+ +C + + L DE V G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELG 325
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 16/303 (5%)
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
F+VDN TL+ + G T+ L +F R + G + + + ++E LC+
Sbjct: 233 FVVDNA------TLSLIVREFCEKGFVTRALWYFRRF-CEMGLRPNLINFTCMIEGLCKR 285
Query: 213 GYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVA 270
G A +++++ + P+ LI G C G ++A RL ++ R + +
Sbjct: 286 GSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 345
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y + +S CR + R AE +L M+ G+ N T+ LI CK E A
Sbjct: 346 YTAM---ISGYCRDEKMNR----AEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAY 398
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+L M E G PN T+ ++ L + RV E +++ G K Y ++
Sbjct: 399 ELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEH 458
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C I+QA+ +F KM G PD +Y L+ +C R+ ++ F+EAVR G+
Sbjct: 459 CKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTN 518
Query: 451 KEY 453
K Y
Sbjct: 519 KTY 521
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 8/283 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + G + F ++ R K + + ++ C + + AE L+
Sbjct: 309 THTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSR 368
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI G C G + A L M GF YN I+D LC+
Sbjct: 369 MKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVD---GLCK 425
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA KVL NG+ + T+ +LIS CK + A+ LF +M + G P
Sbjct: 426 KGRV----QEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQP 481
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ LI + R+ E + + G K Y + C + A+ F
Sbjct: 482 DIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFF 541
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M G DS TY L++ C +++D+A L+D + G+
Sbjct: 542 HRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGL 584
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 163/402 (40%), Gaps = 34/402 (8%)
Query: 74 NLEADP--LPISQRLHLIFSHVTPTPSLVQ-STLNFSPEAGRAILGFNHW---------- 120
+L+ DP L Q + ++ S + S+V S N++ + + F H+
Sbjct: 66 HLDVDPNSLTHDQAVTIVASLASDAGSMVALSFFNWAIASSK----FRHFTRLYIACAAS 121
Query: 121 LTQNANFSHTDETLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGP--KTLASCIDRLVR 175
L N NF E + F GR K+ AI + + + L P KTL + +
Sbjct: 122 LISNKNFEKAHEVMQCMVKSFAEIGRVKE--AIEMVIEMHNQGLAPSTKTLNWVVKIVTE 179
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDK 234
G F+ M G + + S R++V C+ G +++ + F D+
Sbjct: 180 MGLVEYAENLFDEMCAR-GVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNA 238
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
L+++ +C G + A R G + + C+++ LC++ +A
Sbjct: 239 TLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIE---GLCKRGSV----KQA 291
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIK 353
++L +M G NV T LI LCK +E A +LF ++ H PN T+ +I
Sbjct: 292 FEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMIS 351
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ ++ + ++ RMK G A Y + C E+A + M +G +P
Sbjct: 352 GYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSP 411
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ TY+ ++ C RV +A + RNG++ Y +
Sbjct: 412 NVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTI 453
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 111/301 (36%), Gaps = 41/301 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID +AG + M + GF + + +V+ LC+ G A K++K
Sbjct: 380 TYTTLIDGHCKAGNFERAYELMNVMNEE-GFSPNVCTYNAIVDGLCKKGRVQEAYKVLKS 438
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
DK+ +LI C ++ +A L +M + G + +Y ++ + R
Sbjct: 439 GFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKR 498
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K+ EA + + VP N +T+ +I C+ A+K F+RM + GC
Sbjct: 499 MKESEMFFEEA------VRFGLVPTN-KTYTSMICGYCREGNLRLALKFFHRMSDHGCAS 551
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG------------YAIGKKD--------- 382
+ T+ LI L + +++ E + D M G Y K D
Sbjct: 552 DSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVL 611
Query: 383 -----------YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ +LC ++ A F K+ N + T MT N+
Sbjct: 612 ERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYESNKY 671
Query: 432 D 432
D
Sbjct: 672 D 672
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 136/300 (45%), Gaps = 14/300 (4%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
N+ GP C ++G+ + +ME + K D ++++ LC++G
Sbjct: 211 NEVTYGPVLKVMC-----KSGQTALAMELLRKME-ERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 217 YAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A L + + F D I LI+G+C G+ D+ +L R+M + VA++ ++
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
DC K + + EAE++ +M G+ + T+ LI CK + + A +
Sbjct: 325 DCFVKEGKLR-------EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M GC PN TF +LI +A + +G E+ +M G Y + C + +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+E A +F++M + PD +Y +L+ C + +KA +F++ ++ +E+ Y +
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 126/287 (43%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G F ME GFK D ++ C G KL++D +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIK-GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI + +GKL EA+ L +EM + G TV Y ++D C++
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID---GFCKEN--- 366
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+LD +A +L M G N+ TFN+LI+ CK +D ++LF +M G + T+
Sbjct: 367 QLD-KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI+ + ++ E+ M S Y L LC E+A+ +FEK++
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D Y++++ C ++VD A LF GV+ K Y +
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 42/227 (18%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ D + LI+G+C GKL+ AK L +EM V+Y +LD LC +P
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD---GLCDNGEP- 473
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A ++ +E + + ++ +N++I +C + +DA LF + G P+ T+
Sbjct: 474 ---EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++I L + + E D + F KM+
Sbjct: 531 NIMIGGLCKKGSLSEADLL-----------------------------------FRKMEE 555
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
DGH+P+ TY++L+ K+ L +E R G V ++
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ N+ T +++I+ C+ R+ A ++ + G P+ TF LI L R
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E E++DRM G+ + LC ++ A+ + ++M G P+ TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ C + A L + +++ +Y +
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++I C KL A ++ + G+E TV ++ + ++ LC + SEA ++
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL---INGLCLEGRV----SEALEL 164
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ M G + T N L++ LC + DA+ L RM E G PNE T+ ++K + +
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ + E++ +M+ + Y + LC ++ A ++F +M+ G D
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVR 443
Y L+ +C R D L + ++
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIK 310
>gi|413921612|gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]
Length = 456
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 135/329 (41%), Gaps = 15/329 (4%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV---LGPKTLASCIDRL 173
F WL +F+ + E R + F + D + + L P T ++ I
Sbjct: 95 FLSWLRAKPSFAASAEHFDALLLPLARARLFPHLWSLASDMRGLGLPLSPTTFSAVISSY 154
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPD 232
+ P Q + F R+ R +G + + +++ LC NG + A KL++ A + + PD
Sbjct: 155 GHSRLPDQAVEVFNRLPR-FGCPQTTEVYNALLDALCANGNFTGAYKLLRRMARKGVAPD 213
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
L+ WC GKL EA+ +M G + ++D + + +
Sbjct: 214 RATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLE------- 266
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A+ L M G+ +V TFN L LC + A+ L G P+ +T+ V++
Sbjct: 267 QAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVSLLADASSRGLCPDISTYKVML 326
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
++ + ++ E + G+ Y + LC R A + F MKT GH
Sbjct: 327 PAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKTKGHP 386
Query: 413 PDSETYDLLMTKWCAHNR--VDKANALFD 439
P+ Y +++ K C V+ AN L +
Sbjct: 387 PNRPVY-VMLVKMCVRGGRFVEAANYLVE 414
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 84/221 (38%), Gaps = 12/221 (5%)
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
LA +M G L ++ ++ RL +A +V + G P+ E +N
Sbjct: 131 LASDMRGLGLPLSPTTFSAVISSYGHS-------RLPDQAVEVFNRLPRFGCPQTTEVYN 183
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
L+ LC A KL RM G P+ TF L+ S A ++ E +D M
Sbjct: 184 ALLDALCANGNFTGAYKLLRRMARKGVAPDRATFSTLVDSWCAAGKLQEAQAFLDDMAGR 243
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G + + L +EQA + +M +G PD T++ L C VD A
Sbjct: 244 GLRPPVRGRDLLVDGLVRAGHLEQAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFA 303
Query: 435 NALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
+L +A G+ Y+V P K GK E
Sbjct: 304 VSLLADASSRGLCPDISTYKV-----MLPAVAKVGKIEEAF 339
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 9/187 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D LVRAG Q F RM ++ G D + + E LC G +A L+ D ++
Sbjct: 256 VDGLVRAGHLEQAKAFALRMTKE-GILPDVATFNSLAEALCNAGDVDFAVSLLADASSRG 314
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +++ GK++EA RL G Y I+ + K R D F
Sbjct: 315 LCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAIIKALCKAGRFADAF 374
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
DM+ G P N + +L+ + R +A M E G P TF
Sbjct: 375 AF-------FGDMKTKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGFTPRAPTF 427
Query: 349 LVLIKSL 355
++ L
Sbjct: 428 SAVVDGL 434
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 7/204 (3%)
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
D+A + + R G T YN +LD LC + + A K+L M GV +
Sbjct: 161 DQAVEVFNRLPRFGCPQTTEVYNALLDA---LCANGN----FTGAYKLLRRMARKGVAPD 213
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
TF+ L+ + C + ++A M G P +L+ L +A + +
Sbjct: 214 RATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLEQAKAFAL 273
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
RM G + LC ++ A+S+ + G PD TY +++
Sbjct: 274 RMTKEGILPDVATFNSLAEALCNAGDVDFAVSLLADASSRGLCPDISTYKVMLPAVAKVG 333
Query: 430 RVDKANALFDEAVRNGVEVKPKEY 453
++++A LF AV +G P Y
Sbjct: 334 KIEEAFRLFYAAVEDGHRPFPSLY 357
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 10/294 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ ++ PD +I G+C +G +DEA L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G + TV+Y +L + R D AE+++ M G P N TFN L
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-------AEELMSQMIQQGCPPNPVTFNTL 467
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y L R+ + + +F+ +K D+ Y+ +++ C D+A
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIR 490
F V NG Y + + L K+ + E L E +R R +R
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ--ELLSELCSRGALRKHLMR 639
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 123/270 (45%), Gaps = 14/270 (5%)
Query: 184 GFFERMER------DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC- 236
G FER+ ++G D +++ +C+ G+ A +++ + + +C
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ ++KG C + EA+ L EM++ L V +N ++D C+ L +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD---FFCQNG----LVDRVIE 377
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M +G +V T+ +I+ CK ++A+ L M GC PN ++ +++K L
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
A R + +E++ +M G + + LC +EQA+ + ++M +G +PD
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+Y ++ + ++A L + V G+
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 24/252 (9%)
Query: 203 RLVVEKLCENG---------YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
+++E C +G A +A+ DT N C+L++ C G +DEA
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGN--------CNLVLNAICEQGCVDEAV 201
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L R++ G E V+YN +L LC K + E+++ +M N+ TF
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVL---KGLCMAKRW----GDVEELMDEMVRVDCAPNIVTF 254
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LI LC+ E ++ +M E GC P+ + +I + + + +E+++RM S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y L LC ER ++A + +M D T+++L+ +C + VD+
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 434 ANALFDEAVRNG 445
L ++ + +G
Sbjct: 375 VIELLEQMLSHG 386
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 35/301 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D + LV+ +CE G A L++ A D + + ++KG C+ + +
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV 235
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD------SE------------- 293
+ L EM R V +N + + LCR R+ SE
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTL---IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292
Query: 294 ------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
A ++L M G+ NV +N ++ LC R ++A +L M + C
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
++ TF +L+ Q V E++++M S G Y + C I++A+
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ + M + G P++ +Y +++ C+ R A L + ++ G P + +L
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Query: 462 K 462
K
Sbjct: 473 K 473
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+++G C G++ +A + EM G Y+ IL+ CR FR + +VL
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILE---AACRSGG-FR---NSVRVL 169
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G + N++++ +C+ ++A+ L ++ +GC + ++ ++K L A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R G+ +E++D M A + + LC E+ V +M G PD Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEK 478
++ C ++ AN + + G++ Y LK + ++ K+ E L +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT---VLKGLCSAERWKEAEELLSE 346
Query: 479 MARKRRRLKQIRLSFV 494
M +K L + + +
Sbjct: 347 MFQKDCPLDDVTFNIL 362
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 10/294 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ ++ PD +I G+C +G +DEA L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G + TV+Y +L + R D AE+++ M G P N TFN L
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-------AEELMSQMIQQGCPPNPVTFNTL 467
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y L R+ + + +F+ +K D+ Y+ +++ C D+A
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIR 490
F V NG Y + + L K+ + E L E +R R +R
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ--ELLSELCSRGALRKHLMR 639
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 123/270 (45%), Gaps = 14/270 (5%)
Query: 184 GFFERMER------DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC- 236
G FER+ ++G D +++ +C+ G+ A +++ + + +C
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ ++KG C + EA+ L EM++ L V +N ++D C+ L +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD---FFCQNG----LVDRVIE 377
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M +G +V T+ +I+ CK ++A+ L M GC PN ++ +++K L
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
A R + +E++ +M G + + LC +EQA+ + ++M +G +PD
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+Y ++ + ++A L + V G+
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 24/252 (9%)
Query: 203 RLVVEKLCENG---------YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
+++E C +G A +A+ DT N C+L++ C G +DEA
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGN--------CNLVLNAICEQGCVDEAV 201
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L R++ G E V+YN +L LC K + E+++ +M N+ TF
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVL---KGLCMAKRW----GDVEELMDEMVRVDCAPNIVTF 254
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LI LC+ E ++ +M E GC P+ + +I + + + +E+++RM S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y L LC ER ++A + +M D T+++L+ +C + VD+
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 434 ANALFDEAVRNG 445
L ++ + +G
Sbjct: 375 VIELLEQMLSHG 386
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 35/301 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D + LV+ +CE G A L++ A D + + ++KG C+ + +
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV 235
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD------SE------------- 293
+ L EM R V +N + + LCR R+ SE
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTL---IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292
Query: 294 ------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
A ++L M G+ NV +N ++ LC R ++A +L M + C
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
++ TF +L+ Q V E++++M S G Y + C I++A+
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ + M + G P++ +Y +++ C+ R A L + ++ G P + +L
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Query: 462 K 462
K
Sbjct: 473 K 473
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+++G C G++ +A + EM G Y+ IL+ CR FR + +VL
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILE---AACRSGG-FR---NSVRVL 169
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G + N++++ +C+ ++A+ L ++ +GC + ++ ++K L A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R G+ +E++D M A + + LC E+ V +M G PD Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEK 478
++ C ++ AN + + G++ Y LK + ++ K+ E L +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT---VLKGLCSAERWKEAEELLSE 346
Query: 479 MARKRRRLKQIRLSFV 494
M +K L + + +
Sbjct: 347 MFQKDCPLDDVTFNIL 362
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 9/279 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P++ + + RL + GR FF+ M G KR + ++++ LC+ G A L
Sbjct: 220 PRSCNALLHRLSKVGRGDLSRKFFKDMGAA-GIKRSVFTYNIMIDYLCKEGDLEMARSLF 278
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
F PD + LI G G LDE + +M + + YN +++C K
Sbjct: 279 TQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKF 338
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R F L +M+ NG+ NV T++ I CK ++AIK F M
Sbjct: 339 ERMPKAFEF-------LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVAL 391
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PNE T+ LI + +A + E ++++ + AG + Y L LC R+++A
Sbjct: 392 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 451
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
VF M G P+ ETY L+ + ++ A + E
Sbjct: 452 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKE 490
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 153/368 (41%), Gaps = 14/368 (3%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S F D F + + F VD + V L P T S ID +AG + L E +
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
+ G K + + +++ LCE G AE++ + N + P+ + L+ G+ +
Sbjct: 422 LQA-GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
++ AK + +EM + + Y IL LC + RL+ EA+ ++ +++ +G+
Sbjct: 481 MEYAKDILKEMKEKCIKPDLLLYGTIL---WGLCNES---RLE-EAKLLIGEIKESGINT 533
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N + L+ K ++ +A+ L M + G E T+ LI L ++ V E
Sbjct: 534 NAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHF 593
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
RM G Y + LC E A +F++M G PD Y L+ H
Sbjct: 594 GRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKH 653
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQ 488
+ +A L D + G+E+ Y L V+K R L E + + +
Sbjct: 654 GNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKA--RNLLDEMIGKGVLPDEV 711
Query: 489 IRLSFVKK 496
+ + +KK
Sbjct: 712 VYMCLIKK 719
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 117/306 (38%), Gaps = 52/306 (16%)
Query: 186 FERMERDY---------GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKI 235
FERM + + G K + + ++ C+ G A K D + P++
Sbjct: 338 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 397
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
LI C G L EA +L E+ + G +L V Y +LD + + R K EAE
Sbjct: 398 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK-------EAE 450
Query: 296 KVLLDMEYNGVPRNVETFNVLISN-----------------------------------L 320
+V M GV N ET+ L+ L
Sbjct: 451 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 510
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C R E+A L + E G + N + L+ + +++ + E +++ M G +
Sbjct: 511 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATE 570
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC +++AM F +M G P+ Y L+ C +N + A LFDE
Sbjct: 571 VTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDE 630
Query: 441 AVRNGV 446
+ G+
Sbjct: 631 MLDKGM 636
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 7/225 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FP + C+ L+ G+ D +++ ++M G + YN ++D LC++ D
Sbjct: 216 VFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMID---YLCKEGDL- 271
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A + M+ G ++ T+N LI K+ ++ I +F +M + C P+ T+
Sbjct: 272 ---EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 328
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + R+ + E + MK+ G Y F+ C +++A+ F M+
Sbjct: 329 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 388
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ TY L+ C + +A L +E ++ G+++ Y
Sbjct: 389 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 433
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 9/215 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
+D ++G+ T+ L E M D G + + +++ LC++G A + +
Sbjct: 542 MDAYFKSGQATEALTLLEEM-LDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG 600
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ + L+ G C + + AK+L EM G +AY ++D K ++
Sbjct: 601 LQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 660
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L ++ G+ ++ + LI L + + A L M G P+E +
Sbjct: 661 NLRDRMIEI-------GMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVY 713
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ LIK Y +V E E+ + M G G D+
Sbjct: 714 MCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 748
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 117/307 (38%), Gaps = 33/307 (10%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R DF+ + F L P + + L + R L FFE + GF+ ++
Sbjct: 82 RWDDFRIVSLF----DSALAPIWASRVLVELCQDARLA--LRFFEWAKGRIGFQHTSEAY 135
Query: 203 RLVVEKLCENGYASYAEKLVKD--TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++V L + S A ++K+ + P + DLL W + ++
Sbjct: 136 CILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLL---WATRNVCVPGFGVFDALF 192
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
ELG + EA + L M V + N L+ L
Sbjct: 193 SALIELGML----------------------EEASECFLKMRKFRVFPKPRSCNALLHRL 230
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
K+ R + + K F MG G + T+ ++I L + + + +MK AG+
Sbjct: 231 SKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDI 290
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + + +++ + +FE+MK +PD TY+ L+ +C R+ KA E
Sbjct: 291 VTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHE 350
Query: 441 AVRNGVE 447
NG++
Sbjct: 351 MKANGLK 357
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 150/355 (42%), Gaps = 19/355 (5%)
Query: 112 RAILGFNHWLTQNANFSHTDETLSFFTD--YFGRRKDFKAIHDFLVDNKEVLGPKTLASC 169
R+ L F H + S T+ + S T+ + + ++ D + ++LG + L
Sbjct: 10 RSFLFFIHQHFTTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPV 69
Query: 170 I------DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG--YASYA-EK 220
+ LV+ + V+ ++M+ + + +L +++ LC + + +A
Sbjct: 70 VVFNKLLGSLVKKKHYSTVISLCKQMDLS-NIRPNVYTLTILINCLCHSNRDHVHFAFSA 128
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
L K + P L+ G C K+ +A +L E+ + GF + Y I+ + K
Sbjct: 129 LGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCK 188
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ + +L L ME G +V +N +I +LCK RR+ +A+ F M + G
Sbjct: 189 IGHTTNALQL-------LKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG 241
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ ++ ++ E + +M + + LC I +A
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEAR 301
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
VFE M +G PD+ TY LM +C +++D+A LFD V G + Y +
Sbjct: 302 RVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNI 356
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L + G T L ++ME + G K D + V++ LC++ A+ A +
Sbjct: 178 TYTTIIKGLCKIGHTTNALQLLKKME-EKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P + + ++ G+C G+L+EA L ++M TV + ++D LC+
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVD---GLCK 293
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + EA +V M NGV + T++ L+ C + ++A KLF M G P
Sbjct: 294 EG----MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAP 349
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + +LI ++ R+ E ++ M Y + C R + A +F
Sbjct: 350 SVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLF 409
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++M + G PDS TY +L+ C H +D+A L + +E
Sbjct: 410 KEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIE 453
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 9/289 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TA 226
+ ID L + R + + FF M D G + + ++ C G + A L K
Sbjct: 216 TVIDSLCKDRRANEAMYFFSEM-VDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG 274
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ P+ +L+ G C +G + EA+R+ M G E Y+ ++D C +
Sbjct: 275 RNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMD---GYCLQS- 330
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
++D EA+K+ M G +V +N+LI+ CK RR +A L M + P+
Sbjct: 331 --QMD-EAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ L++ QA R ++ M S G Y L LC +++A + + M
Sbjct: 388 TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAM 447
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ P Y++L+ C +++ A LF G++ Y V
Sbjct: 448 QESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTV 496
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L + + F+ + + GF + +++ LC+ G+ + A +L+K
Sbjct: 143 TFGTLLNGLCSKAKIIDAVKLFDEIGK-MGFAPSLITYTTIIKGLCKIGHTTNALQLLKK 201
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + +I C D + +EA EM G V Y+ IL L +
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+EA + M V N TF +L+ LCK +A ++F M E G P
Sbjct: 262 L-------NEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP 314
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ L+ +++ E ++ D M G+A + Y + C R+ +A ++
Sbjct: 315 DAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLL 374
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M PD+ TY LM +C R A LF E G+
Sbjct: 375 SEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGL 417
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 136/343 (39%), Gaps = 23/343 (6%)
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRL 173
++ ++ L N +E S F GR + T +D L
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTV--------------TFTILVDGL 291
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PD 232
+ G + FE M + G + D + +++ C A+KL + F P
Sbjct: 292 CKEGMILEARRVFEMMTEN-GVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
++ ++LI G C +L+EAK L EMY TV Y+ ++ C+ P
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQ---GFCQAGRP----Q 403
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A+K+ +M G+ + T+++L+ LCK ++A +L M E P+ + +LI
Sbjct: 404 VAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ + ++ E+ + G Y ++ L +A +F KM +G
Sbjct: 464 QGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCL 523
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+S TY++ + + + A L +E V G +++
Sbjct: 524 PNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQM 566
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCV 245
E +RD D + +++ C+ G A+KL K+ + + PD +L+ G C
Sbjct: 376 EMYDRD--LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCK 433
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G LDEA RL + M E YN + + +C F A ++ ++ G
Sbjct: 434 HGHLDEAFRLLKAMQESKIEPHICIYNIL---IQGMCN----FGKLEAARELFSNLFVKG 486
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ +V T+ V+IS L K S +A ++F +M GC PN T+ V I+ +
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAV 546
Query: 366 EMIDRMKSAGYAIGKKDYYEFL 387
+I+ M G++ + L
Sbjct: 547 RLIEEMVGRGFSADSSTFQMLL 568
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 13/298 (4%)
Query: 154 LVDNKEVLGPKT----LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L+D LG KT S I+ + G + G RM D+ K D S +++
Sbjct: 320 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV-DWNLKPDSYSYNTLLDGY 378
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C G+ S A L E I P + L+KG C G D+A ++ M + G
Sbjct: 379 CREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDE 438
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y+ +LD + K+ + F S K D+ G ++ TFN +IS LCK+ + +
Sbjct: 439 VGYSTLLDGLFKM----ENFEGASTLWK---DILARGFTKSRITFNTMISGLCKMGKMVE 491
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A ++F +M + GC P+ T+ LI +A+ VG+ ++ M+ + + Y ++
Sbjct: 492 AEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLIS 551
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L R+ + + +M G P+ TY L+ WC +DKA + + E NG+
Sbjct: 552 GLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 145/365 (39%), Gaps = 20/365 (5%)
Query: 93 VTPTPSL-----VQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
+ PT SL V NF P ++ H L++ + T L+ D +
Sbjct: 46 LNPTASLGFFQFVSKQQNFRPNV-KSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRG 104
Query: 148 KAIHDFLVD--NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
I D LV + P + V G L F+ M + G S +
Sbjct: 105 NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGK-CGRIPSLRSCNSL 163
Query: 206 VEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ L +NG A + + I PD + +++ +C DGK+DEA ++M G
Sbjct: 164 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 223
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK-VLLDMEYNGVPRNVETFNVLISNLCKI 323
E V Y+ +++ L D EA K VL M GV RNV T+ +LI CK
Sbjct: 224 EPNIVTYHSLINGYVSLG--------DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 275
Query: 324 RRSEDAIKLFYRMGEWGCH-PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ ++A K+ M E P+E + VLI + ++ + ++D M G
Sbjct: 276 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 335
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ C I +A V +M PDS +Y+ L+ +C +A L D+ +
Sbjct: 336 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 395
Query: 443 RNGVE 447
+ G+E
Sbjct: 396 QEGIE 400
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 132/307 (42%), Gaps = 45/307 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ V G G + M + G R+ + L+++ C+ AEK+++
Sbjct: 229 TYHSLINGYVSLGDVEAAKGVLKFMS-EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 287
Query: 225 TANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E + PD++ +LI G+C GK+D+A RL EM R G + N + ++ C
Sbjct: 288 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL---INGYC 344
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS------------------------ 318
++ + EAE V+ M + + ++N L+
Sbjct: 345 KRGEI----HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 400
Query: 319 -----------NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
LC++ +DA+++++ M + G P+E + L+ L++ +
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 460
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ + G+ + + ++ LC + ++ +A +F+KMK G +PD TY L+ +C
Sbjct: 461 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520
Query: 428 HNRVDKA 434
+ V +A
Sbjct: 521 ASNVGQA 527
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 16/241 (6%)
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
E + + ++SY E T N + + IC ++ G G++DEA L ++M GF
Sbjct: 591 EGMLDKAFSSYFEM----TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF-- 644
Query: 267 GTVAYNCILDC-VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
+ C L + +K LD + LL P N+ +N+ I+ LCK +
Sbjct: 645 -FPDHECFLKSDIRYAAIQKIADSLDESCKTFLL-------PNNI-VYNIAIAGLCKTGK 695
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+DA + F + G P+ T+ LI A V E + D M G Y
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 755
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LC E +++A +F K+ G P+ TY+ L+ +C +D A L D+ + G
Sbjct: 756 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 815
Query: 446 V 446
+
Sbjct: 816 I 816
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 115/286 (40%), Gaps = 12/286 (4%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
++ S ++ LV+ G +++M R G D + ++V C++G A VK
Sbjct: 158 RSCNSLLNNLVKNGETHTAHYVYQQMIR-VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 216
Query: 224 DTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
N + P+ LI G+ G ++ AK + + M G V Y ++ K C
Sbjct: 217 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 276
Query: 283 RKKDPFRLDSEAEKVLLDMEYNG--VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ EAEKVL M+ VP + + VLI C+ + +DA++L M G
Sbjct: 277 KM-------DEAEKVLRGMQEEAALVP-DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 328
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
N LI + + E + +I RM Y L C +A
Sbjct: 329 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 388
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ +KM +G P TY+ L+ C D A ++ ++ GV
Sbjct: 389 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 434
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 16/281 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ + G+ + GF ++ME + G + + + ++ G A+ ++K + +
Sbjct: 199 VNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----AYNCILDCVSKLCRK 284
+ + LLIKG+C K+DEA+++ R M E V AY ++D + +
Sbjct: 258 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE---EAALVPDERAYGVLIDGYCRTGKI 314
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D RL E ++ G+ N+ N LI+ CK +A + RM +W P+
Sbjct: 315 DDAVRLLDEMLRL-------GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 367
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
++ L+ + E + D+M G Y L LC + + A+ ++
Sbjct: 368 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 427
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M G PD Y L+ + A+ L+ + + G
Sbjct: 428 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 468
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 44/288 (15%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLD 250
GF + + + ++ LC+ G AE++ +KD PD LI G+C +
Sbjct: 468 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS--PDGITYRTLIDGYCKASNVG 525
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+A ++ M R YN + +S L + + RL E +L +M G+ N+
Sbjct: 526 QAFKVKGAMEREPISPSIEMYNSL---ISGLFKSR---RL-VEVTDLLTEMGIRGLTPNI 578
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ LI CK + A ++ M E G N ++ LY+ R+ E + ++ +
Sbjct: 579 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 638
Query: 371 MKSAGY---------------AIGKKD-----------------YYEFLTRLCGIERIEQ 398
M G+ AI K Y + LC +++
Sbjct: 639 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 698
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
A F + G PD+ TY L+ + A VD+A L DE +R G+
Sbjct: 699 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGL 746
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+ + LC+ G A + + + F PD+ LI G+ G +DEA RL EM R
Sbjct: 685 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 744
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G V YN + ++ LC+ ++ R A+++ + G+ NV T+N LI CK
Sbjct: 745 GLVPNIVTYNAL---INGLCKSENVDR----AQRLFHKLHQKGLFPNVVTYNTLIDGYCK 797
Query: 323 IRRSEDAIKLFYRMGEWGCHPN 344
I + A KL +M E G P+
Sbjct: 798 IGNMDAAFKLKDKMIEEGISPS 819
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 141/355 (39%), Gaps = 65/355 (18%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + +G+P + +GF ++M D G + D + L+++ LC+NG A K+
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 225 TA------------------------------------NEIFPDDKICDLLIKGWCVDGK 248
N I PD + +LI + GK
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF-----RLD------------ 291
+D+A + +M + G V Y ++ + K R +D +D
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 292 -----------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
AE+++L+M G+ N FN +I + CK R ++ KLF M G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ LI A ++ E +++ M S G Y + C I R+E A+
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+F++M++ G +PD TY++++ R A L+ +G +++ Y +
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 133/297 (44%), Gaps = 19/297 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L ++GR + +FE+M D G ++ LC AE+L+ +
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQM-IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 225 TANEIFPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
D IC + +I C +G++ E+++L M R G + + YN +++
Sbjct: 467 -----MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L K D EA K+L M G+ N T++ LI+ CKI R EDA+ LF M
Sbjct: 522 C-LAGKMD------EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P+ T+ ++++ L+Q R E+ R+ +G I Y L LC + +
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A+ +F+ + ++ T+++++ R D+A LF NG+ YR+
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 114/245 (46%), Gaps = 8/245 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G +EKL + + P+ + LI G+C+ GK+DEA +L M G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ TV Y+ +++ K+ R +D L E ME +GV ++ T+N+++ L +
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKE-------MESSGVSPDIITYNIILQGLFQT 594
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR+ A +L+ R+ E G +T+ +++ L + + +M + + + +
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ L + R ++A +F ++G P+ TY L+ +++ + LF
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
Query: 444 NGVEV 448
NG V
Sbjct: 715 NGCTV 719
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 127/304 (41%), Gaps = 41/304 (13%)
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF 230
D L+R GR + G R D +DS V + ++ + A+E+
Sbjct: 39 DELLRRGRGASIYGL-NRALADVA----RDSPAAAVSRY---------NRMARAGADEVT 84
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +LI C G+LD + + GF + +A+ +L LC K R
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLL---KGLCADK---RT 138
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE---WGCHPNETT 347
+ VL M G NV ++N+L+ LC RS++A++L + M + G P+ +
Sbjct: 139 SDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 198
Query: 348 FLVLIKSLYQAARVGEGD---------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
+ +I ++ EGD EM+DR G Y + LC + +++
Sbjct: 199 YTTVINGFFK-----EGDSDKAYSTYHEMLDR----GILPDVVTYNSIIAALCKAQAMDK 249
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR 458
AM V M +G PD TY+ ++ +C+ + +A + +GVE Y +
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 459 YLKK 462
YL K
Sbjct: 310 YLCK 313
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 14/265 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI--FPDDKICDLLIKGWCVDGKLDE 251
GF+ D + +++ LC + S A +V E+ P+ ++L+KG C + + E
Sbjct: 117 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQE 176
Query: 252 AKRLAREMY---RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
A L M GG V+Y + ++ ++ D +A +M G+
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTV---INGFFKEGDS----DKAYSTYHEMLDRGILP 229
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+N +I+ LCK + + A+++ M + G P+ T+ ++ + + E +
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M+S G Y + LC R +A +F+ M G P+ TY L+ +
Sbjct: 290 KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 349
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
+ + + L D VRNG+ P Y
Sbjct: 350 GALVEMHGLLDLMVRNGIH--PDHY 372
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 122/291 (41%), Gaps = 12/291 (4%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
++D L S ID + GR + FE M R G K + + ++ C G
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR-IGVKPNVITYNTLINGYCLAG 525
Query: 214 YASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A KL+ + + P+ LI G+C ++++A L +EM G + YN
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
IL + + R + A+++ + + +G + T+N+++ LCK + ++DA+++
Sbjct: 586 IILQGLFQT-------RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F + TF ++I +L + R E ++ S G Y + G
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN---ALFDE 440
+E+ +F M+ +G DS + ++ + + +A ++ DE
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 141/355 (39%), Gaps = 65/355 (18%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S + +G+P + +GF ++M D G + D + L+++ LC+NG A K+
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 225 TA------------------------------------NEIFPDDKICDLLIKGWCVDGK 248
N I PD + +LI + GK
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF-----RLD------------ 291
+D+A + +M + G V Y ++ + K R +D +D
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 292 -----------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
AE+++L+M G+ N FN +I + CK R ++ KLF M G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ LI A ++ E +++ M S G Y + C I R+E A+
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+F++M++ G +PD TY++++ R A L+ +G +++ Y +
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 133/297 (44%), Gaps = 19/297 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L ++GR + +FE+M D G ++ LC AE+L+ +
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQM-IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 225 TANEIFPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
D IC + +I C +G++ E+++L M R G + + YN +++
Sbjct: 467 -----MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L K D EA K+L M G+ N T++ LI+ CKI R EDA+ LF M
Sbjct: 522 C-LAGKMD------EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P+ T+ ++++ L+Q R E+ R+ +G I Y L LC + +
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A+ +F+ + ++ T+++++ R D+A LF NG+ YR+
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 114/245 (46%), Gaps = 8/245 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G +EKL + + P+ + LI G+C+ GK+DEA +L M G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ TV Y+ +++ K+ R +D L E ME +GV ++ T+N+++ L +
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKE-------MESSGVSPDIITYNIILQGLFQT 594
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR+ A +L+ R+ E G +T+ +++ L + + +M + + + +
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ L + R ++A +F ++G P+ TY L+ +++ + LF
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
Query: 444 NGVEV 448
NG V
Sbjct: 715 NGCTV 719
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 127/304 (41%), Gaps = 41/304 (13%)
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF 230
D L+R GR + G R D +DS V + ++ + A+E+
Sbjct: 39 DELLRRGRGASIYGL-NRALADVA----RDSPAAAVSRY---------NRMARAGADEVT 84
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +LI C G+LD + + GF + +A+ +L LC K R
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLL---KGLCADK---RT 138
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE---WGCHPNETT 347
+ VL M G NV ++N+L+ LC RS++A++L + M + G P+ +
Sbjct: 139 SDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 198
Query: 348 FLVLIKSLYQAARVGEGD---------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
+ +I ++ EGD EM+DR G Y + LC + +++
Sbjct: 199 YTTVINGFFK-----EGDSDKAYSTYHEMLDR----GILPDVVTYNSIIAALCKAQAMDK 249
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR 458
AM V M +G PD TY+ ++ +C+ + +A + +GVE Y +
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 459 YLKK 462
YL K
Sbjct: 310 YLCK 313
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 14/265 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI--FPDDKICDLLIKGWCVDGKLDE 251
GF+ D + +++ LC + S A +V E+ P+ ++L+KG C + + E
Sbjct: 117 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQE 176
Query: 252 AKRLAREMY---RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
A L M GG V+Y + ++ ++ D +A +M G+
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTV---INGFFKEGDS----DKAYSTYHEMLDRGILP 229
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+N +I+ LCK + + A+++ M + G P+ T+ ++ + + E +
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M+S G Y + LC R +A +F+ M G P+ TY L+ +
Sbjct: 290 KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 349
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
+ + + L D VRNG+ P Y
Sbjct: 350 GALVEMHGLLDLMVRNGIH--PDHY 372
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 122/291 (41%), Gaps = 12/291 (4%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
++D L S ID + GR + FE M R G K + + ++ C G
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR-IGVKPNVITYNTLINGYCLAG 525
Query: 214 YASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A KL+ + + P+ LI G+C ++++A L +EM G + YN
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
IL + + R + A+++ + + +G + T+N+++ LCK + ++DA+++
Sbjct: 586 IILQGLFQT-------RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F + TF ++I +L + R E ++ S G Y + G
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN---ALFDE 440
+E+ +F M+ +G DS + ++ + + +A ++ DE
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ L + G T + ++ME + G K + +++ LC++ + A + + +
Sbjct: 84 TYSTIINGLCKMGSTTMAIQLLKKME-EKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSE 142
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N I P+ ++ G+C G+ +EA L ++M TV +N ++D +SK
Sbjct: 143 MVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKE-- 200
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA+ V M GV NV T+N L+ C + ++A KLF M GC P
Sbjct: 201 -----GMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAP 255
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ +LIK ++ R+ E ++ M Y + C R + A +
Sbjct: 256 SVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLL 315
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
E+M++ G PD TY +++ C +D+A L + +E
Sbjct: 316 EEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIE 359
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 7/210 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +I G C G A +L ++M G + V Y+ I+D LC+ K L
Sbjct: 80 PDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID---SLCKDK----L 132
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+EA + L +M G+ NV T++ ++ C + RS +A LF +M E P+ TF +
Sbjct: 133 ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ L + + E + + M G Y + C ++++A +F M G
Sbjct: 193 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
P +Y++L+ C R+D+A L E
Sbjct: 253 CAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ ID L + T+ + F M + G + + ++ C G ++ A L K
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEM-VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ PD ++L+ G +G + EA+ + M G E YN ++D C +
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMD---GYCSQS 236
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
++D EA+K+ M G +V ++N+LI CK R ++A L M P+
Sbjct: 237 ---QMD-EAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ L+K Q R + ++++ M+S G Y L LC +++A + +
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M+ P+ Y +L+ C +++ A LF G++ Y V
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 131/293 (44%), Gaps = 11/293 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T +S + GR + F++M ER+ D + ++V+ L + G A+ + +
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERN--VMPDTVTFNILVDGLSKEGMILEAQCVFE 211
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + P+ + L+ G+C ++DEA++L M R G +YN + + C
Sbjct: 212 TMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNIL---IKGHC 268
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ R+D EA+ +L +M + + + T++ L+ C+ R +DA KL M +G
Sbjct: 269 KSG---RID-EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLL 324
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ +++ L + + E E++ M+ + Y + +C ++E A +
Sbjct: 325 PDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAREL 384
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
F + G PD TY ++++ ++A LF + +G Y V
Sbjct: 385 FSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNV 437
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 9/230 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGK--LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ I PD +LI +C A + M++ G + V ++ +L+ +S +
Sbjct: 4 SNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D +L E K+ G +V T++ +I+ LCK+ + AI+L +M E GC PN
Sbjct: 64 IDAVKLFDEMVKM-------GYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPN 116
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ +I SL + + E E + M + G + Y L C + R +A S+F+
Sbjct: 117 VVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFK 176
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+M PD+ T+++L+ + +A +F+ + GVE Y
Sbjct: 177 QMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYN 226
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 134/316 (42%), Gaps = 9/316 (2%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
GR + ++ +V+ + T +D L + G + FE M + G + + +
Sbjct: 165 LGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM-IEKGVEPNVN 223
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ +++ C A+KL + P + ++LIKG C G++DEAK L EM
Sbjct: 224 TYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEM 283
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
TV Y+ ++ C+ P +A+K+L +M G+ ++ T+++++
Sbjct: 284 SHKALTPDTVTYSTLM---KGFCQDGRP----QDAQKLLEEMRSYGLLPDLMTYSIVLDG 336
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LCK ++A +L M E PN + +LI+ + ++ E+ + G
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPD 396
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y ++ L +A +F M G P+S TY++++ + + A L +
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIE 456
Query: 440 EAVRNGVEVKPKEYRV 455
E V G +++
Sbjct: 457 EMVGRGFSADSSTFQM 472
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDD 233
++GR + G M D + +++ C++G A+KL+++ + + PD
Sbjct: 269 KSGRIDEAKGLLAEMSHK-ALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDL 327
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+++ G C G LDEA L + M E Y + + +C F
Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL---IQGMCN----FGKLEA 380
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A ++ ++ G+ +V T+ V+IS L K S +A +LF M GC PN T+ V+I+
Sbjct: 381 ARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQ 440
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+ +I+ M G++ ++ L+ L E ++ +S+F + G
Sbjct: 441 GFLRNGDTSNAGRLIEEMVGRGFS-ADSSTFQMLSDL---ESRDEIISLFMHGSSQG 493
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 10/312 (3%)
Query: 145 KDFKAIHDFLVDNKEVLGPK-TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLR 203
++ K + + +V N ++ + T + I L + G L F E + GF DK
Sbjct: 354 EEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAE-EKGFHIDKVGYS 412
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
VV+ C+N A+ LV D ++ PD +I G+C GK+DEAK++ ++MY+
Sbjct: 413 AVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKH 472
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + TV Y +L+ LC EA +++ E + N T++ ++ L +
Sbjct: 473 GCKPNTVTYTVLLN---GLCHNGKSL----EAREMINVSEEHWWTPNAITYSAVMHGLRR 525
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ +A L M E G PN +LI+SL + V + ++ G A+ +
Sbjct: 526 EGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVN 585
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + C I ++ A+S+ E M +PD+ TY L +R+D+A+ L + +
Sbjct: 586 FTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKML 645
Query: 443 RNGVEVKPKEYR 454
G++ P YR
Sbjct: 646 GKGIDPTPVTYR 657
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 21/331 (6%)
Query: 129 HTDET-LSFFTDYFGRRKDFKAIHDFLVD------NKEVLGPKTLASCIDRLVRAGRPTQ 181
H D+ S D F + K+ ++D N +V+ T + ID R G+ +
Sbjct: 405 HIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVV---TYTAIIDGFCRVGKIDE 461
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLI 240
++M + +G K + + +++ LC NG + A +++ + + + I ++
Sbjct: 462 AKKMLQQMYK-HGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVM 520
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G +GKL EA L REM GF V N + + LCR ++ A+K L +
Sbjct: 521 HGLRREGKLSEACDLTREMIEKGFLPNPVDINLL---IQSLCRNQNVV----GAKKYLEE 573
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+ G NV F +I C+I + A+ + M HP+ T+ L +L + +R
Sbjct: 574 CLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSR 633
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E E+I +M G Y + R C R++ M + EKM P Y+
Sbjct: 634 LDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI--ARQPFKTVYNQ 691
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
++ K C ++A L + +R ++ K
Sbjct: 692 VIEKLCYFGNREEAEKLLGKVLRTASKLDAK 722
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD IC+ I KL++A R M G E V+YNC+ + C D R+
Sbjct: 265 PDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCL---IKGYC---DVHRI 318
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE-WGCHPNETTFL 349
D +A +++ +M + G P + ++ +++ LCK R+ E+ +L M + P++ T+
Sbjct: 319 D-DALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYN 377
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSA---GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
LI Y ++ G D+ + ++ A G+ I K Y + C + I++A S+ M
Sbjct: 378 TLI---YALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM 434
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ G NPD TY ++ +C ++D+A + + ++G + Y V
Sbjct: 435 YSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTV 483
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD + LIKG+C ++D+A L EM G V+Y ++ + LC+ +
Sbjct: 298 IEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVM---AFLCKDRKV- 353
Query: 289 RLDSEAEKVLLDMEYNG--VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
E ++++ +M N +P V T+N LI L K ++DA+ E G H ++
Sbjct: 354 ---EEVKRLMENMVQNSNLIPDQV-TYNTLIYALSKHGHADDALVFLREAEEKGFHIDKV 409
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ ++ S + + + ++ M S G Y + C + +I++A + ++M
Sbjct: 410 GYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469
Query: 407 KTDGHNPDSETYDLLMTKWCAHN 429
G P++ TY +L+ C HN
Sbjct: 470 YKHGCKPNTVTYTVLLNGLC-HN 491
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 7/177 (3%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ Y +LD +SK RL A ++L M G+ R+ E F+ ++ + +
Sbjct: 197 AIVYYTMLDILSKT-------RLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLR 249
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A+++ M + G P+ + I L + ++ + ++RMK AG Y +
Sbjct: 250 NALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLI 309
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
C + RI+ A+ + +M G PD +Y +M C +V++ L + V+N
Sbjct: 310 KGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQN 366
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL- 221
P T + I R + GR ++ E+M FK + V+EKLC G AEKL
Sbjct: 653 PVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQ---VIEKLCYFGNREEAEKLL 709
Query: 222 --VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
V TA+++ D K C +LI+ + +DG A ++A +M+R
Sbjct: 710 GKVLRTASKL--DAKTCHILIESYLIDGNALSAYKVACQMFR 749
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 11/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I + R G+ + L ERM ++G D + ++V+ LC S ++++ +
Sbjct: 256 IKGVCRVGQVQKALELVERMN-EFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 314
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P+ +I G+C GKL++A + +M G TV YN +++ K+
Sbjct: 315 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKV------ 368
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
L S E V M P +V TF+ LI C+ + +DA++++ M + PN T
Sbjct: 369 GDLGSAVE-VYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYT 427
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMK-SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
F ++I SL + R E +++ + A Y + LC ++++A + + M
Sbjct: 428 FSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGM 487
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ G PD TY +L+ +C +R+ +A F E V G
Sbjct: 488 EEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAG 526
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L R+GR L F++M YG+ PD
Sbjct: 152 LCRSGRQADALQLFDQMTTHYGYS----------------------------------PD 177
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ L+ LD + L + G + AYN ++ + R D L
Sbjct: 178 ARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL-- 235
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E+ + D Y+ +V +FNV+I +C++ + + A++L RM E+GC P+ T +++
Sbjct: 236 -FERWIQDRLYSP---DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIV 291
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAI-GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
L + V G E++ R++ G + + ++ C ++E AM+V+ M G
Sbjct: 292 DGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGI 351
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
P++ TY++L+ + + A ++ + R
Sbjct: 352 MPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 383
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 11/236 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ +D A+++ +V + + T I+ + G + +++M R D +
Sbjct: 334 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR-LRCPPDVVT 392
Query: 202 LRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM- 259
+++ C G A ++ D A + I P+ ++I C + DEA RL E+
Sbjct: 393 FSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELN 452
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
R YN ++D + K C K D EA + ME G + T+ +LI
Sbjct: 453 LRPDIAPQAFIYNPVIDVLCK-CGKVD------EANLIRKGMEEKGCRPDKYTYTILIIG 505
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
C R +AI F+ M E GC P+ T I L +A E D ++ R+ S G
Sbjct: 506 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM-RLASGG 560
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR-M 371
+ L+S+ + + L + E+GC + L+ SL RV + + +R +
Sbjct: 181 LSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWI 240
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ Y+ + + +C + ++++A+ + E+M G +PD+ T+++++ C N V
Sbjct: 241 QDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEV 300
Query: 432 DKANALFDEAVRNGV 446
+ + + R+GV
Sbjct: 301 SRGHEVLRRLQRDGV 315
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 128/287 (44%), Gaps = 9/287 (3%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
G + ID L + L F+ ME G + + + ++ LC G S A +L
Sbjct: 255 GVLIYTTIIDGLCKNKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 222 VKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ D +I PD LI + +GKL EA++L EM + + V Y+ + ++
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL---ING 370
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
C RLD EA+++ M +V +++ LI CK +R ++ ++LF M + G
Sbjct: 371 FCMHD---RLD-EAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
N T+ LI+ L+QA E+ M S G Y L LC ++E+AM
Sbjct: 427 LVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
VFE ++ P TY++++ C +V+ LF GV+
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 147/349 (42%), Gaps = 34/349 (9%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD V G P T+ + I L + ++ + +RM G + D + +VV L
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK-GCQPDLVTYGVVVNGL 231
Query: 210 CENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ G A L+ K ++ P I +I G C + +D+A L +EM G
Sbjct: 232 CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNV 291
Query: 269 VAYNCILDCVSKLCRKKDPFRLDS----------------------------EAEKVLLD 300
V Y+ ++ C+ R D RL S EAEK+ +
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + ++ T++ LI+ C R ++A ++F M C P+ ++ LIK +A R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V EG E+ M G Y + L + A +F++M +DG P+ TY+
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
L+ C + +++KA +F+ R+ +E Y + + K V+ G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 131/287 (45%), Gaps = 17/287 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
+GR D + +++ K T ++ ID V+ G+ + ++ M KR D
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-----VKRSID 358
Query: 201 ----SLRLVVEKLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+ ++ C + A+++ + + FPD LIKG+C ++DE L
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMEL 418
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
REM + G TV Y + + L + D A+++ +M +GVP N+ T+N
Sbjct: 419 FREMSQRGLVGNTVTYTTL---IQGLFQAGDC----DMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ LCK + E A+ +F + P T+ ++I+ + +A +V +G ++ + G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y ++ C E+A ++F++MK DG P+S Y+ L+
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 7/205 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI +C +L A + +M + G+E V + +L+ C K R+ SEA +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN---GYCHSK---RI-SEAVAL 173
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ M G N TFN LI L ++ +A+ L RM GC P+ T+ V++ L +
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
++++M+ G Y + LC + ++ A+++F++M+T G P+ T
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293
Query: 418 YDLLMTKWCAHNRVDKANALFDEAV 442
Y L++ C + R A+ L + +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMI 318
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R + K + +F+V + ++ I +A R + + F M + G + +
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR-GLVGNTVTY 434
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYR 261
+++ L + G A+++ K+ ++ P + + + L+ G C +GKL++A + + R
Sbjct: 435 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
E YN +++ + K + +D + L ++ GV +V +N +IS C
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDL-------FCNLSLKGVKPDVVAYNTMISGFC 547
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD-----EMIDRMKSAGY 376
+ E+A LF M E G PN + LI+ AR+ +GD E+I M+S G+
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIR-----ARLRDGDREASAELIKEMRSCGF 602
Query: 377 A 377
A
Sbjct: 603 A 603
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
KLD+A L EM + + ++ +L ++K+ + L + + + G+P
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-------GMP 113
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N T+++LI+ C+ + A+ + +M + G PN T L+ + R+ E +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+D+M GY + + L + +A+++ ++M G PD TY +++ C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 428 HNRVDKANALFDEAVRNGVE 447
D A L ++ + +E
Sbjct: 234 RGDTDLAFILLNKMEQGKLE 253
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 17/276 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-----YASYAEKLVKD 224
ID + + GR + M D G + S ++ LC +G +A +A+ ++
Sbjct: 251 IDGMCKEGRIEVAIKLLGEM-MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
I LIKG + GKL EA L + M + G E VAYN + + LC
Sbjct: 310 CDANIHTFTP----LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL---IHGLCSN 362
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
EA +V M+ +G NV T+++LI K A + + RM GC PN
Sbjct: 363 GSL----EEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ ++ L + + + + ++++M G + F+ LCG R+E AM + E
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLE 478
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+M+ G P+ TY+ L+ N+ ++A LF E
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 17/277 (6%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKL---CENGYASYAEKLVKDTANEIFPDDKIC 236
+ VLGFF + F+ + R+++E+L CE Y + +K D IC
Sbjct: 55 SSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC 114
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+I G+ G ++A ++ + G + YN +LD + ++ F++
Sbjct: 115 --IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDAL----LSENKFQM---INP 165
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+ +M+ +G+ NV T+N+L+ LCK R + A KLF M GC P+ T+ ++ SL
Sbjct: 166 LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+A ++ + E+ R K + Y + +C RIE A+ + +M +G +P+
Sbjct: 226 KAGKIDDARELAGRFKPS-----VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVV 280
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+Y ++ C V+ A ALF + G + +
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTF 317
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 155/371 (41%), Gaps = 50/371 (13%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNK--EVLGPKTLASC- 169
++LGF + + F HT T + GR + + L K + + L C
Sbjct: 56 SVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICI 115
Query: 170 IDRLVRAGRPTQVLGFFERME--------RDYGFKRD-------------------KDSL 202
I+ R G Q L F R+ R Y D KD L
Sbjct: 116 INGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGL 175
Query: 203 -------RLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKR 254
++++ LC+N A KL + +N+ P D + ++ C GK+D+A+
Sbjct: 176 IPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE 235
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
LA G F+ YN ++D +C++ R++ A K+L +M NGV NV +++
Sbjct: 236 LA-----GRFKPSVPVYNALID---GMCKEG---RIEV-AIKLLGEMMDNGVDPNVVSYS 283
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
+I++LC E A LF +M GC N TF LIK + ++ E ++ M
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G Y + LC +E+A+ V ++M+ G P+ TY +L+ + + A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 435 NALFDEAVRNG 445
+ ++ + +G
Sbjct: 404 SETWNRMISHG 414
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 38/283 (13%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G D + +V LC+ G A +L A P + + LI G C +G+++ A
Sbjct: 209 GCPPDAVTYTTMVSSLCKAGKIDDAREL----AGRFKPSVPVYNALIDGMCKEGRIEVAI 264
Query: 254 RLAREMYRGGFELGTVAYNCILD--CVS-----------------------------KLC 282
+L EM G + V+Y+CI++ CVS K C
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ EA + M +G NV +N LI LC E+A+++ +M GC
Sbjct: 325 FMRGKLY---EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL 381
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN TT+ +LI ++ + E +RM S G Y + LC +QA S+
Sbjct: 382 PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSL 441
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
EKM +G P++ T++ + C + RV+ A L + +G
Sbjct: 442 VEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 10/260 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + ID ++G + RM +G + + + +V+ LC+N A LV K
Sbjct: 386 TYSILIDGFAKSGDLVGASETWNRM-ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T P+ + IKG C +G+++ A +L M G YN +LD + ++ +
Sbjct: 445 MTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ F L E +E + N+ T+N ++ + +A++LF + G P
Sbjct: 505 YEEAFGLFQE-------IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAP 557
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG-YAIGKKDYYEFLTRLCGIERIEQAMSV 402
+ T+ +I + + +V ++++R+ S + Y + C IE+AM+
Sbjct: 558 DSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAF 617
Query: 403 FEKMKTDGHNPDSETYDLLM 422
+K G P+ T++ L+
Sbjct: 618 LDKAINQGICPNFATWNALV 637
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 120/303 (39%), Gaps = 37/303 (12%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKI 235
G+ + L ++ M +D G + + + ++ LC NG A ++ + P+
Sbjct: 328 GKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTT 386
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+LI G+ G L A M G V Y C++D LC+ + +S E
Sbjct: 387 YSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV---LCKNSMFDQANSLVE 443
Query: 296 KVLLD-------------------------------MEYNGVPRNVETFNVLISNLCKIR 324
K+ L+ M+ +G N+ T+N L+ L ++
Sbjct: 444 KMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ E+A LF + PN T+ ++ +A +GE ++ + G A Y
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYN 563
Query: 385 EFLTRLCGIERIEQAMSVFEKMKT-DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C +++ A + E++ + +PD TY L+ C +++A A D+A+
Sbjct: 564 TMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623
Query: 444 NGV 446
G+
Sbjct: 624 QGI 626
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 164/413 (39%), Gaps = 85/413 (20%)
Query: 120 WLTQNA------NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRL 173
W+ +A N + D+ LS F R + +I DF K L S +
Sbjct: 19 WMISHAFHSKSLNVNTIDDALSLFNRML-RMRPPPSIVDF---------SKLLTS----I 64
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PD 232
R + VL +++M+ +G + +L +++ C +A ++ D + P
Sbjct: 65 TRMKHYSTVLSLYKQMD-SFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPS 123
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR--- 289
LI+G CV+GK+ EA +L +M GF+ + Y +++ + K+ R
Sbjct: 124 TATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLR 183
Query: 290 -----------------LDS--------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+DS EA + DM G+ N T++ LI LC +
Sbjct: 184 SMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILG 243
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA---------- 374
++AI+LFY M P++ TF L+ +L + V + ++D M +
Sbjct: 244 HWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYN 303
Query: 375 ----GYAI----GKK-----------------DYYEFLTRLCGIERIEQAMSVFEKMKTD 409
G+ + GK Y + C I+ +++AM +FE+M
Sbjct: 304 SLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQ 363
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
G PD+ TY+ L+ C R+ A ALF E V G YR+ YL K
Sbjct: 364 GLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCK 416
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 8/262 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D+ + +V+ LC+ G A +V +++ PD + L+ G C+ ++ + +
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVF 322
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M R G ++Y +++ K+ ++ +A + +M G+ + T+N L
Sbjct: 323 DTMVRKGCVPSVISYTTLINGYCKI-------QIMDKAMGLFEEMSQQGLIPDTVTYNTL 375
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I LC + R DAI LF+ M +G P+ T+ +L L + R+ E ++ ++
Sbjct: 376 IHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 435
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + +C +E A +F K+ + G +PD TY +++ C + +A+
Sbjct: 436 DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASK 495
Query: 437 LFDEAVRNGVEVKPKEYRVDPR 458
LF E NG Y + R
Sbjct: 496 LFGEMDENGCSPNACTYNLITR 517
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 15/293 (5%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ ID L + + T+ L F M G + + ++ LC G+ A +L
Sbjct: 198 STIIDSLCKDRQLTEALSLFSDMLAK-GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 256
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CV-SKLC 282
+ +I PD + L+ C +G + +A + M + + V YN ++D C+ S++
Sbjct: 257 HRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMG 316
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ + F D+ K G +V ++ LI+ CKI+ + A+ LF M + G
Sbjct: 317 KTVNVF--DTMVRK--------GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLI 366
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ LI L R+ + + M G Y LC R+ +AM +
Sbjct: 367 PDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVL 426
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ ++ +PD Y ++M C ++ A LF + G+ + Y +
Sbjct: 427 LKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 7/210 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C +D+A L EM + G TV YN ++ + + R +D L E
Sbjct: 340 LINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM---- 395
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ Y +P ++ T+ +L LCK R +A+ L + P+ + +++ + +A
Sbjct: 396 --VVYGQIP-DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 452
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ ++ ++ S G + Y + LC + +A +F +M +G +P++ TY
Sbjct: 453 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTY 512
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+L+ + +N +A LF E + G +
Sbjct: 513 NLITRGFLRNNETLRAIQLFQEMLSRGFSI 542
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 11/211 (5%)
Query: 148 KAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
KA+ F +++ L P T+ + I L GR + F M YG D + R++
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVV-YGQIPDLVTYRIL 410
Query: 206 VEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LC+N + A L+K + PD I +++ G C G+L+ A+ L ++ G
Sbjct: 411 FDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 470
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
Y + ++ LC++ L +EA K+ +M+ NG N T+N++ +
Sbjct: 471 HPDVRTYTIM---INGLCQQG----LLAEASKLFGEMDENGCSPNACTYNLITRGFLRNN 523
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+ AI+LF M G + +T +L++ L
Sbjct: 524 ETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 187/446 (41%), Gaps = 58/446 (13%)
Query: 33 SPTHYLNFLSKPFSSKPTSNP--KTIDDPDQVIARSLSGELLENLEADP-LPISQRLHLI 89
+P H+L FSS PTS P KT P+ V ++L+ + DP P + L+ +
Sbjct: 17 NPLHFL-----VFSSVPTSYPFPKTTPFPNLVF------KVLDLISTDPHWPKNPELNRL 65
Query: 90 FSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSH-------------------- 129
S T P V +N A L F +W+++ + H
Sbjct: 66 AS--TLRPHHVSKIINTHINTDTA-LQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAP 122
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFF 186
D + K + DFL + L TL S L++ G+ V
Sbjct: 123 ADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQ 182
Query: 187 ERMERDY--GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-----PDDKICDLL 239
+ + G K + ++ LC+ G A + N+IF PD L
Sbjct: 183 NVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF----NKIFQFDLCPDAFTYTSL 238
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
I G C + KLD+A + M + G +V Y+ + ++ LC + R+ EA +L
Sbjct: 239 ILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTL---INGLCNEG---RI-GEAMDMLE 291
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+M G+ V T+ V IS+LC I R +DAI L MG+ GC P+ T+ +I L++A
Sbjct: 292 EMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAG 351
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
++ M +M G Y + LC R A+ +F+ M+ G +++TY+
Sbjct: 352 KMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYN 411
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNG 445
++ + ++KA +F++ +++G
Sbjct: 412 QIIKGLFGMDDIEKAMVVFNKMLKDG 437
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+++VKD N P+ LI G C +G++ EA + EM G E Y +
Sbjct: 256 DRMVKDGCN---PNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVP---I 309
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
S LC D R+D +A ++ M G +V+T+ +IS L + + E AI ++++M +
Sbjct: 310 SSLC---DIGRVD-DAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLK 365
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G PN T+ LI L R G ++ D M+ G + Y + + L G++ IE+
Sbjct: 366 EGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEK 425
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTK 424
AM VF KM DG +P TY+ L+ +
Sbjct: 426 AMVVFNKMLKDGPSPTVVTYNTLIVE 451
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 113/271 (41%), Gaps = 12/271 (4%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWC 244
F M ++ + D+ + ++ C+ G A + I P+ +I G+C
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYC 523
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
+GK+D A L M G YN I+ +SK R SEAEK M
Sbjct: 524 KEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRF-------SEAEKFCAKMTEQ 576
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ N T+ LI+ LCK + A K+F+ M + C PN T+ LI L Q +V
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV--- 633
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ +R+ G Y ++ LC R +A + E MK G +P E Y L+
Sbjct: 634 -DAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVA 692
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C +VD A +F+ G + Y+V
Sbjct: 693 HCKSLKVDCALEIFNLMAVKGFQPHLFIYKV 723
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 9/299 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ L GR + + E M G + + + + LC+ G A LV+
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEK-GIEPTVYTYTVPISSLCDIGRVDDAINLVRS 327
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P + +I G GK++ A + +M + G TV YN + +++LC
Sbjct: 328 MGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNAL---INELC- 383
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ F + A K+ ME +G N +T+N +I L + E A+ +F +M + G P
Sbjct: 384 TEGRFGI---ALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSP 440
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ LI + + + MK + ++ Y E ++ C +++ A S F
Sbjct: 441 TVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFF 500
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+M G +P+ TY ++ +C ++D A +LF+ NG + Y L K
Sbjct: 501 YEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSK 559
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 13/259 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + ID + G+ L FERME + G ++ ++ L + S AEK K
Sbjct: 514 TYTAMIDGYCKEGKIDVALSLFERMEEN-GCSASIETYNAIISGLSKGNRFSEAEKFCAK 572
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T + P+ LI G C + + A ++ EM + Y + + LC+
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSL---IYGLCQ 629
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ ++D+ AE+ + NG ++T++ L+S LC+ RS +A +L M E G P
Sbjct: 630 EG---KVDA-AER----LTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSP 681
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + L+ + ++ +V E+ + M G+ Y + LCG+ R E+A+++F
Sbjct: 682 SMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIF 741
Query: 404 EKMKTDGHNPDSETYDLLM 422
+ + N D + +L+
Sbjct: 742 QSLLKKQWNSDLIVWTVLV 760
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 123/317 (38%), Gaps = 42/317 (13%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + I L RAG+ +G + +M ++ G + + ++ +LC G A K+
Sbjct: 338 QTYTAIISGLFRAGKMELAIGMYHKMLKE-GLVPNTVTYNALINELCTEGRFGIALKIFD 396
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL------- 275
+ + + + +IKG +++A + +M + G V YN ++
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRG 456
Query: 276 ---------------DC----------VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+C +S C+ +LDS A +M G+ N
Sbjct: 457 YLNNATRFLYMMKESNCEPDERTYCELISGFCKGG---KLDS-ATSFFYEMLKCGISPNQ 512
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ +I CK + + A+ LF RM E GC + T+ +I L + R E ++ +
Sbjct: 513 WTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAK 572
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G Y + LC A +F +M+ P++ TY L+ C +
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632
Query: 431 VDKANALFDEAVRNGVE 447
VD A L NG E
Sbjct: 633 VDAAERL----TENGCE 645
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 127/303 (41%), Gaps = 43/303 (14%)
Query: 170 IDRLVRAGRPTQV-------------LGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
++RL RP V L FF + + + +K D + S
Sbjct: 62 LNRLASTLRPHHVSKIINTHINTDTALQFFYWISKRHFYKHDMGC------------FVS 109
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY------RGGFELGTVA 270
+LVKD + P D + L+IK C + DE KR+ ++ G F +
Sbjct: 110 MLNRLVKDKI--LAPADHVRILMIKA-CRNE--DELKRVTDFLHGISSSDSGLFGFTLYS 164
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+N +L + K F + + A+ V + +GV ++ TFN +I+ LCK + ++A+
Sbjct: 165 FNTLLLQLGK-------FDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAV 217
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+F ++ ++ P+ T+ LI + ++ + E+ DRM G Y + L
Sbjct: 218 LVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C RI +AM + E+M G P TY + ++ C RVD A L + G
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337
Query: 451 KEY 453
+ Y
Sbjct: 338 QTY 340
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 77/201 (38%), Gaps = 16/201 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ L + F ME+ L+ LC+ G AE+L
Sbjct: 584 TYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIY-GLCQEGKVDAAERL--- 639
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
T N P L+ G C +G+ +EA +L M G Y S L
Sbjct: 640 TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIY------CSLLVAH 693
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
++D E L M G ++ + VLI LC + R+E+A+ +F + + + +
Sbjct: 694 CKSLKVDCALEIFNL-MAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSD 752
Query: 345 ETTFLVLIKSLYQAARVGEGD 365
+ VL+ L Q EGD
Sbjct: 753 LIVWTVLVDGLLQ-----EGD 768
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L GR L + M + G+ S +++ LC G A ++
Sbjct: 296 TFTALVRGLFDDGRVHDALDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNS 354
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
FP+ + LI G+ G L A + +M R G + V Y ++D C+
Sbjct: 355 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD---VFCK 411
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K + S +K+LL+ P N TFN LI +LC RR A+ +F+ M GC P
Sbjct: 412 KLMFNQAKSLIDKMLLE----NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVP 467
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L++ G+ M+ M+S G + Y ++ LC +AM
Sbjct: 468 NGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFV 527
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
KM G P++ T+ ++ +C V A
Sbjct: 528 GKMIVQGIQPNAFTFSAIIHAYCKEGEVRMA 558
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 14/267 (5%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLI 240
V+ ++ M +D G + + L+V LC+N A K++ + A + PDD ++
Sbjct: 143 VVLVYDNMRKD-GVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIV 201
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
C +LDEA + M +YN I V LCR+ FR+ E V+ D
Sbjct: 202 SVLCKLDRLDEATEVLAAM-----PPVAASYNAI---VLALCRE---FRMQ-EVFSVVSD 249
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ NV T+ ++ CK A + RM GC PN TF L++ L+ R
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + +M M + G+A Y + LC + ++ A S+ M+ G P+ TY
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ + + A +++++ R+G +
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCK 396
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + + + +V+ C+ G A L + P+ L++G DG++ +A
Sbjct: 254 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ R M G+ TV+YN + + LC D A +L ME +G NV T
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNIL---IRGLCSVGDL----KGASSILNSMEQHGCFPNVRT 366
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LI K AI ++ M GC PN + ++ + + +ID+M
Sbjct: 367 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 426
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ + LC R+ +A+ VF +M+ G P+ TY+ L+
Sbjct: 427 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 486
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A + E +G+E+ Y
Sbjct: 487 DALHMVTEMQSHGIELSLVTY 507
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T ++ ID +AG + + M R G K + +V+ C+ + A+ L+
Sbjct: 365 RTYSTLIDGFSKAGDLGGAISIWNDMSRS-GCKPNVVVYTNMVDVFCKKLMFNQAKSLID 423
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E P + + + LI+ C ++ A + EM R G YN + + L
Sbjct: 424 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYN---ELIHGLF 480
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R+ + +A ++ +M+ +G+ ++ T+N ++S LC+ R S +A+ +M G
Sbjct: 481 REGNC----GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 536
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN TF +I + + V M+ M Y + LC +++ AM+
Sbjct: 537 PNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 596
Query: 403 FEKMKTDGHNPDSETYDLLM 422
KM +G P++ T+++L+
Sbjct: 597 LLKMLYEGIYPNTVTWNVLV 616
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 107/284 (37%), Gaps = 9/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D +AG RM G + + +V L ++G A + +
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVIT-GCTPNVVTFTALVRGLFDDGRVHDALDMWRW 319
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E + P ++LI+G C G L A + M + G Y+ ++D SK
Sbjct: 320 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSK--- 376
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D A + DM +G NV + ++ CK A L +M C P
Sbjct: 377 AGDL----GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 432
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF LI+SL RVG + M+ G + Y E + L A+ +
Sbjct: 433 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 492
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+M++ G TY+ +++ C +A + + G++
Sbjct: 493 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 536
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 329 AIKLFY-RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A+ L Y M + G HPN T+ +L+++L Q RVG +M+D M G Y +
Sbjct: 142 AVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIV 201
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ LC ++R+++A V M P + +Y+ ++ C R+ + ++ + V G++
Sbjct: 202 SVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQ 256
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
CG + + V++ M+ DG +P+ TY+LL+ C +NRV A + DE R G
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG 189
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 150/355 (42%), Gaps = 14/355 (3%)
Query: 95 PTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSF--FTDYFGRRKDFKAIHD 152
P+P + + LN ++ R L L + + F Y + D + +
Sbjct: 195 PSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFE 254
Query: 153 FL--VDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ + N E P T ++ +D L R GR + FE M D + +++
Sbjct: 255 IVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLING 314
Query: 209 LCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
C G A +++ +N +P+ L+ G C GKL++AK + E+ G +
Sbjct: 315 FCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPD 374
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V Y + ++ LCR EA ++L +M+ NG + TFNVL+ LC+ + E
Sbjct: 375 AVTYTSL---INFLCRNGK----SDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFE 427
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A+ + ++ + G + N+ ++ +++ SL Q + E++ M G+ E L
Sbjct: 428 EALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELL 487
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
LC ++ A + G P ET+++L+ C ++ L DE V
Sbjct: 488 VCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDELV 542
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 10/288 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
PK L++C++ L+ + R +RD K + ++V+ C+NG A ++V
Sbjct: 197 PKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIV 256
Query: 223 KDTANEIF--PDDKICDLLIKGWCVDGKLDEAKRLAREMY-RGGFELGTVAYNCILDCVS 279
++ N F P+ L+ G C +G++ EA L EM R + YN + ++
Sbjct: 257 EEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVL---IN 313
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
CR P R A V+ M+ NG NV ++ L+ LCK+ + EDA + +
Sbjct: 314 GFCRGGKPDR----ARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGS 369
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ T+ LI L + + E E+++ MK G + L LC + E+A
Sbjct: 370 GLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEA 429
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ + EK+ G + +Y +++ + +A L +R G +
Sbjct: 430 LDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQ 477
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 156/368 (42%), Gaps = 27/368 (7%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASC------- 169
FN QN F H + T + D R +F A+ VL T +C
Sbjct: 113 FNMVSEQNG-FQHNNATYATILDKLARCNNFHAV-------DRVLHQMTYETCKFHEGIF 164
Query: 170 ---IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+ ++ ++L + ++ K +L + L ++ A KL+
Sbjct: 165 VNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDLARKLLLHAK 224
Query: 227 NEIFPDDKIC--DLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCR 283
++ +C ++L+K C +G LD A + EM F V Y+ ++D + + R
Sbjct: 225 RDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGR 284
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K+ F L E + + + + T+NVLI+ C+ + + A + M GC+P
Sbjct: 285 VKEAFDLFEEM------VSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYP 338
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N + L+ L + ++ + ++ +K +G Y + LC + ++A+ +
Sbjct: 339 NVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELL 398
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
E+MK +G DS T+++L+ C + ++A + ++ + GV + YR+ L +
Sbjct: 399 EEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQK 458
Query: 464 IAVKKGKK 471
+K+ K+
Sbjct: 459 CELKRAKE 466
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 11/315 (3%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G K HD +V + + ++ L + G + RM D + +
Sbjct: 94 GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLL-RMIEDRSTRPNVVM 152
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC++ + A L + A EIFP+ + LI +C+ G+L A L EM
Sbjct: 153 YSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMI 212
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
++ ++D LC++ A+++ M GV NV ++N++I+ L
Sbjct: 213 LKNINPDVYTFSILID---ALCKE------GKNAKQIFHAMVQMGVNPNVYSYNIMINGL 263
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK +R ++A+ L M P+ T+ LI L ++ R+ +++ M G
Sbjct: 264 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 323
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L LC + +++A ++F KMK G P TY L+ C R+ A LF
Sbjct: 324 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 383
Query: 441 AVRNGVEVKPKEYRV 455
+ G + Y V
Sbjct: 384 LLVKGCCIDVWTYTV 398
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 14/270 (5%)
Query: 181 QVLGFFERMERDY--GFKRDKDSLRLVVEKLCENGYAS--YAEKLVKDTANEIFPDDKIC 236
Q++G F + D + ++++ LC+ G + +V+ N P+
Sbjct: 200 QLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVN---PNVYSY 256
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I G C ++DEA L REM TV YN ++D + K R L +E
Sbjct: 257 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE--- 313
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
M + G P +V T+ L+ LCK + + A LF +M E G P T+ LI L
Sbjct: 314 ----MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLC 369
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ R+ E+ + G I Y ++ LC ++A+++ KM+ +G P++
Sbjct: 370 KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAV 429
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
T+++++ + DKA L E + G+
Sbjct: 430 TFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 134/342 (39%), Gaps = 67/342 (19%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ LV+ V+ ++M+ G +++ +L +++ C G +++ L+
Sbjct: 17 LGSLVKLKYYLTVISLSKQMDVK-GIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLG 75
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK-------- 280
+ P+ L+KG C+ G++ + ++ F+ V+Y +L+ + K
Sbjct: 76 YXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAI 135
Query: 281 ------------------------LCRKK---DPFRLDSE-------------------- 293
LC+ K + + L SE
Sbjct: 136 KLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAF 195
Query: 294 --------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
A +L +M + +V TF++LI LCK ++A ++F+ M + G +PN
Sbjct: 196 CLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCK--EGKNAKQIFHAMVQMGVNPNV 253
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
++ ++I L + RV E ++ M Y + LC RI A+++ +
Sbjct: 254 YSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE 313
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M G D TY L+ C + +DKA ALF + G++
Sbjct: 314 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 355
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 146/357 (40%), Gaps = 28/357 (7%)
Query: 108 PEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGP---K 164
PEA L F H + + + D + F L + +E P +
Sbjct: 120 PEA----LTFFHHVVPSLPADSLPALYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQ 175
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ + I R VRAG + F RME D L ++ L + A A+ L D
Sbjct: 176 VILAIIRRYVRAGMSPEASELFRRMEEYGAGVPDPAVLASLLGALSKKRLAGEAQALF-D 234
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ +FP D + L+ WC G LD+A+++ EM + G Y ++D + + +
Sbjct: 235 SYKSVFPPDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQ 294
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
A+++L M G P N TFN ++ K RSE +++ +M + GC P
Sbjct: 295 V-------PRAQELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDP 347
Query: 344 NETTFLVLIKSLYQAARVGEGDEMID-RMKSAGYAIGK---KDYYEF---LTRLCGIERI 396
+ T+ L+++ G+G +D MK I K D + F L + G +
Sbjct: 348 DIITYNFLMET-----HCGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNV 402
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
E A ++E+M+ P+ TY+LLM + +D + + GVE Y
Sbjct: 403 EAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTY 459
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 9/276 (3%)
Query: 205 VVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC S A KL+ K T + + P+ + LI G+ +G+++EA+RL M G
Sbjct: 156 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 215
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
YN I+ C+SK + + EA LL+++ G+ + TF I K
Sbjct: 216 VAPDIFCYNAIISCLSKAGKME-------EASTYLLEIQGRGLKPDAVTFGAFILGYSKT 268
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A K F M + G PN + VLI ++A + E + + + G +
Sbjct: 269 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 328
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
F+ L R+++A+ VF ++K G PD TY L++ +C V+KA L DE
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 388
Query: 444 NGVEVKPKEYRVDPRYLKKPIAVKKGKKR-ETLPEK 478
G+ Y L K +++ +K + +PEK
Sbjct: 389 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 424
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 7/218 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ ++ G C +++EAK EM + G + YN + R+ D
Sbjct: 6 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK---PDYNACSALIDGFMREGDI- 61
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
E ++ M G+P N+ T+NVLI LCK + E A ++ M GC PN TF
Sbjct: 62 ---DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF 118
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI+ + +G E++D M+ Y + LC + + A + EKM
Sbjct: 119 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 178
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P+ Y L+ + + R+++A L D +GV
Sbjct: 179 SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGV 216
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 27/304 (8%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T ++ I L++ GR + L F + ++ G D + ++ C+ G A +L
Sbjct: 326 QTCSAFIHGLLKNGRVQEALKVFSEL-KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 384
Query: 224 DTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ I P+ I + L+ G C G + A++L M G E +V Y+ ++D C
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID---GYC 441
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ ++ +EA + +M GV + +N L+ CK E A+ LF M + G
Sbjct: 442 KSENV----AEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-F 496
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA--- 399
+F LI ++ ++ E ++ M + Y + C ++E+A
Sbjct: 497 ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 556
Query: 400 --------------MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++FEKM G PD TY L++ C + + +A L DE V G
Sbjct: 557 FKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 616
Query: 446 VEVK 449
+ K
Sbjct: 617 MLTK 620
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 11/219 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD I G+ GK+ EA + EM G Y +++ F+
Sbjct: 253 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN---------GHFKA 303
Query: 291 DS--EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA + + GV +V+T + I L K R ++A+K+F + E G P+ T+
Sbjct: 304 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 363
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + V + E+ D M G A Y + LC I++A +F+ M
Sbjct: 364 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 423
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G PDS TY ++ +C V +A +LF E GV+
Sbjct: 424 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 462
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 123/275 (44%), Gaps = 9/275 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L RA R + FE M++ G K D ++ +++ G ++ + P
Sbjct: 20 LCRAKRMNEAKLTFEEMQKT-GLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 78
Query: 233 DKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ I ++LI G C GK+++A + + M G + + + C+L + CR+ + R
Sbjct: 79 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF-CLL--IEGYCREHNMGR-- 133
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A ++L +ME + + ++ +I+ LC + A KL +M G PN + L
Sbjct: 134 --ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 191
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I R+ E ++D M +G A Y ++ L ++E+A + +++ G
Sbjct: 192 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 251
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD+ T+ + + ++ +A FDE + +G+
Sbjct: 252 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 286
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L +AG+ + + ++ G K D + + + G + A K + +
Sbjct: 227 ISCLSKAGKMEEASTYLLEIQ-GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 285
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P++ + +LI G G L EA + R ++ G + + + K R +
Sbjct: 286 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ--- 342
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA KV +++ G+ +V T++ LIS CK E A +L M G PN +
Sbjct: 343 ----EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 398
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ L ++ + ++ D M G Y + C E + +A S+F +M +
Sbjct: 399 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 458
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P S Y+ L+ C ++KA LF E ++ G
Sbjct: 459 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ N T+ ++ + LC+ +R +A F M + G P+ LI +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E + D M S G I Y + LC ++E+A + + M T G P+S T+ L
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 421 LMTKWCAHNRVDKANALFDE 440
L+ +C + + +A L DE
Sbjct: 121 LIEGYCREHNMGRALELLDE 140
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD C LI G+ +G +DE R+ M G + + YN + + LC+ F
Sbjct: 43 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVL---IHGLCK----FGK 95
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A ++L M G N TF +LI C+ A++L M + P+ ++
Sbjct: 96 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 155
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L + ++++++M +G Y + RIE+A + + M G
Sbjct: 156 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 215
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PD Y+ +++ ++++A+ E G++
Sbjct: 216 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 252
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 122/301 (40%), Gaps = 62/301 (20%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L ++G + F+ M + G + D + +++ C++ + A L + ++
Sbjct: 402 VDGLCKSGDIQRARKLFDGMP-EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + + L+ G C +G +++A L REM + GF T+++N ++D K C+ +
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQ--- 516
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA-----------------IK 331
EA ++ +M + + T+ +I CK + E+A
Sbjct: 517 ----EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFA 572
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
LF +M G P+E T+ ++I + + + E ++ D + G + +T LC
Sbjct: 573 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 632
Query: 392 GIE-----------------------------------RIEQAMSVFEKMKTDGHNPDSE 416
E ++++A VFE +K+ G PD+
Sbjct: 633 KREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTT 692
Query: 417 T 417
T
Sbjct: 693 T 693
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 145/359 (40%), Gaps = 49/359 (13%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T S + + + ++F LV+ +E L T I L R+G + GF + M
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 178
Query: 190 ERDYGFKRDKDSLRLVVEKLCEN-----------------------------------GY 214
E DYG D + ++ LC++ G
Sbjct: 179 E-DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 237
Query: 215 ASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
A A K++K+ A + P+ D L++G C G++D A L ++M R T+ YN
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
I++ + KKD FRL SE ME G+ NV T++++I LC+ E A L
Sbjct: 298 IIEGHFRHHNKKDAFRLLSE-------MENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
M G PN + LI + V E+ D+M Y + L +
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
R+E++ F +M+ G P+ TY L+ + + ++ A L + G +KP +
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG--LKPND 467
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI+ +C + D AK++ EM G L TV YN + ++ LCR
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVL---IAGLCRSGAV- 168
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA DME G+ + T+ LI+ LCK RRS +A L M PN +
Sbjct: 169 ---EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 225
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + E +MI M +AG K Y + LC + ++++A + ++M
Sbjct: 226 ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 285
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D H PD+ TY+L++ H+ A L E G+ Y +
Sbjct: 286 DSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSI 332
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 10/264 (3%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKL 249
R+ G + + +++ LC +G A KD + + PD LI G C +
Sbjct: 144 RERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS 203
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
+EAK L EM + V Y ++D R+ + EA K++ +M GV N
Sbjct: 204 NEAKALLDEMSCAELKPNVVVYANLID---GFMREGNA----DEAFKMIKEMVAAGVQPN 256
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
T++ L+ LCK+ + + A L +M P+ T+ ++I+ ++ + ++
Sbjct: 257 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLS 316
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M++AG + Y + LC E+A + E+M T G P++ Y L++ +C
Sbjct: 317 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 376
Query: 430 RVDKANALFDEAVRNGVEVKPKEY 453
V A +FD+ + V V P Y
Sbjct: 377 NVSLACEIFDKMTK--VNVLPDLY 398
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 21/312 (6%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK---D 224
S I L + GR + +F +M+ + G ++ + ++ +NG AE+LV+ D
Sbjct: 402 SLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 460
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
T + P+D I L++ + +++ + M G L Y ++ +S
Sbjct: 461 TG--LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 518
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ FR+ SE EK NG +V ++ LIS LCK E A + M + G PN
Sbjct: 519 EAAFRVLSEIEK-------NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 571
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ LI L ++ + + + + + G Y + C + I A ++
Sbjct: 572 IVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYN 631
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA-VRNGVEVKPKEYRVDPRYLKKP 463
+M G PD+ Y +L T + +++A L +E +R + VD
Sbjct: 632 EMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDG------ 685
Query: 464 IAVKKGKKRETL 475
K+GK +ETL
Sbjct: 686 -FCKRGKMQETL 696
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 14/262 (5%)
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ D+L+ + G++ +A + M G N +L KD R D+ A
Sbjct: 49 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALL---------KDLLRADAMA 99
Query: 295 --EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
KV M G+ +V T++ LI CK+R + A K+ M E GC N T+ VLI
Sbjct: 100 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 159
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L ++ V E M+ G Y + LC R +A ++ ++M
Sbjct: 160 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKR 472
P+ Y L+ + D+A + E V GV+ Y R L K + + +
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK---MGQMDRA 276
Query: 473 ETLPEKMARKRRRLKQIRLSFV 494
L ++M R R I + +
Sbjct: 277 SLLLKQMVRDSHRPDTITYNLI 298
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 80/208 (38%), Gaps = 10/208 (4%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
N V +S I L + + G + M + G + +++ LC++G S
Sbjct: 531 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK-GVDPNIVCYNALIDGLCKSGDIS 589
Query: 217 YAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
YA + A + P+ LI G C G + A L EM G Y+ +
Sbjct: 590 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 649
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
S D E L++ + ++ +FN L+ CK + ++ +KL +
Sbjct: 650 TGCSSAG--------DLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHV 701
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGE 363
+ G PN T +I L +A ++ E
Sbjct: 702 IMGRGLVPNALTIENIISGLSEAGKLSE 729
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
R+ +VL+ K R +DA ++ M + G P+ L+K L +A + ++
Sbjct: 45 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKV 104
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M AG + Y + C + + A V +M+ G ++ TY++L+ C
Sbjct: 105 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 164
Query: 428 HNRVDKA 434
V++A
Sbjct: 165 SGAVEEA 171
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 142/319 (44%), Gaps = 16/319 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L G+ Q L F +++ GF+ ++ S +++ LC+ G A L++
Sbjct: 159 TFTTLIKGLCLKGQIHQALNFHDKLVA-LGFQFNQISYGTLIDGLCKVGETRAALDLLRR 217
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P+ + +I G C D +++A L EM G V Y+ ++ + +
Sbjct: 218 VDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGK 277
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
KD L ++ M + +V TFN+L+ CK + A+KL M + G P
Sbjct: 278 LKDAVDLFNK-------MISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPP 330
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ ++ +L + RV + ++ ++K G Y + LC ++E A ++F
Sbjct: 331 NIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIF 390
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
E + G++ TY ++ +C D+A+AL + NG K Y L K
Sbjct: 391 EDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYE-----LIKL 445
Query: 464 IAVKKGKKRETLPEKMARK 482
KKG+ + EK+ R+
Sbjct: 446 SLFKKGE--NDMAEKLHRE 462
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME+ G+ N+ N+LI+ C++ A +F ++ + G +PN TF LIK L +
Sbjct: 113 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQ 172
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + D++ + G+ + Y + LC + A+ + ++ P+ Y
Sbjct: 173 IHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYST 232
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
++ C V+ A L+ E V G+
Sbjct: 233 IIDGMCKDKHVNDAFDLYSEMVSKGIS 259
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 139/345 (40%), Gaps = 30/345 (8%)
Query: 107 SPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV------DNKEV 160
+PE A L F WL + F HT ++ + RR+ +V D E
Sbjct: 67 APEPATA-LAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAED 125
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
+ + A I + R G L + Y F +LR + +
Sbjct: 126 M--RVSADAIQAIRRTGSARLALS-----PKCYNF-----ALRSLARFDMTEYMGRVYSQ 173
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
LV+D + PD + +IK +C +G L A R R + GG E T N + V
Sbjct: 174 LVQDG---LLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL---VLG 227
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
CR + +A + L M G RN ++ +LI LC + A+ LF M G
Sbjct: 228 YCRTGEL----RKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 283
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN F LI L ++ RVG+ + D M G Y + + R+ A+
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ E M+ +G +PD TY+ L+ C + ++A L + AV+ G
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 13/313 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + + D + N V T + I + GR L E ME++ G D +
Sbjct: 302 GRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKN-GCHPDDWT 360
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC+ AE+L+ + E F P LI G+C+ K D+A R+ +M
Sbjct: 361 YNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 419
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L + +++ + K KD + EA+++L ++ NG+ NV T+ +I
Sbjct: 420 SSKCKLDLQVFGKLINSLIK----KDRLK---EAKELLNEISANGLVPNVITYTSIIDGY 472
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + + A+++ M GC PN T+ L+ L + ++ + ++ +M+ G
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L C + A +FE M+ +G PD Y +L C R ++A +
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI-- 590
Query: 441 AVRNGVEVKPKEY 453
VR GV + Y
Sbjct: 591 -VRKGVALTKVYY 602
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 10/237 (4%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E L + +AN + P+ +I G+C GK+D A + + M R G + YN ++
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM--- 504
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L + K + A +L M+ +G+ NV T+ L+ C ++A +LF M +
Sbjct: 505 YGLVKDKKLHK----AMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P+E + VL +L +A R E I R G A+ K Y + +
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDF 617
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A ++ E+M +G PDS TY +L+ C R+++A + D+ G++ Y +
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 10/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I L A + L F M+RD G + + ++ LC++G A L N
Sbjct: 260 IQGLCDAKCVRKALVLFLMMKRD-GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 318
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + +I G+ G++++A ++ M + G YN + + LC +K
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL---IYGLCDQKT-- 373
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EAE++L + G V TF LI+ C + +DA+++ +M C + F
Sbjct: 374 ---EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 430
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI SL + R+ E E+++ + + G Y + C +++ A+ V + M+
Sbjct: 431 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 490
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
DG P++ TY+ LM ++ KA AL + ++G+
Sbjct: 491 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 12/314 (3%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R K+ K + + + N V T S ID ++G+ L + MERD G + + +
Sbjct: 442 RLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD-GCQPNAWTY 500
Query: 203 RLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ L ++ A L+ K + I P+ L++G C + D A RL M +
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G + AY + D + K R ++ + + GV + LI
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSF----------IVRKGVALTKVYYTTLIDGFS 610
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K ++ A L RM + GC P+ T+ VL+ +L + R+ E ++D+M G
Sbjct: 611 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 670
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + + + + A ++ +M + GH P + TY + + +C R++ A L +
Sbjct: 671 AYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 730
Query: 442 VRNGVEVKPKEYRV 455
R GV Y +
Sbjct: 731 EREGVAPDVVTYNI 744
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 136/346 (39%), Gaps = 33/346 (9%)
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
+ + TD + + + F+V L + ID +AG ERM
Sbjct: 567 EHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM- 625
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYA-----EKLVKDTANEIFPDDKICDLLIKGWCV 245
D G D + +++ LC+ + A + ++ IF + D +++
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR---- 681
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
+GK D AKR+ EM G + Y ++ K R +D AE ++L ME G
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED-------AEDLILKMEREG 734
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA--ARVGE 363
V +V T+N+LI + + A RM C PN T+ +L+K L + A V
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794
Query: 364 GD--------------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
D ++++RM G Y + C R+E+A + + M
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G +P+ + Y LL+ C +KA + G + + + YR+
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 111/290 (38%), Gaps = 22/290 (7%)
Query: 161 LGPKTLASCIDRLVRAG----RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
L P A+ + L RA P L FFE + R GF+ DS ++ L +
Sbjct: 48 LAPSVTAAHVADLFRADSTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPA 107
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
E+LV N D D+ + +A + R L YN L
Sbjct: 108 QYERLVVSMLN---CSDTAEDMRVSA--------DAIQAIRRTGSARLALSPKCYNFALR 156
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+++ F + +V + +G+ + T+N +I + CK A + F +
Sbjct: 157 SLAR-------FDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLL 209
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
E G P T L+ + + + + M G + Y + LC + +
Sbjct: 210 LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCV 269
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+A+ +F MK DG +P+ + L++ C RV A LFD +NGV
Sbjct: 270 RKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGV 319
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 101/262 (38%), Gaps = 11/262 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID ++R G+ + M G K + + + C+ G AE L+ E
Sbjct: 676 IDEMLREGKHDHAKRMYNEMTSS-GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK----LCRK 284
+ PD ++LI G G +D A + M E Y +L + K R
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794
Query: 285 KDPFRLDSEAE-----KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
D + + E ++L M +G+ V T++ LI+ CK R E+A L M
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G PNE + +LIK + + M G+ + Y + LC E+
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 914
Query: 400 MSVFEKMKTDGHNPDSETYDLL 421
S+F + G+N D + +L
Sbjct: 915 KSLFCDLLELGYNHDEVAWKIL 936
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 130/312 (41%), Gaps = 17/312 (5%)
Query: 140 YFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
+ G K HD +V L + + I+ L +AG V ++E + K D
Sbjct: 143 FCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLE-GHSVKPDL 201
Query: 200 DSLRLVVEKLCENGYAS-----YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKR 254
++ LC+N Y+E +VK + +F LI G+C+ G L EA
Sbjct: 202 VMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTT----LIHGFCIMGNLKEAFS 257
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L EM +N ++D ++K ++D EA + +M++ + N+ T+
Sbjct: 258 LLNEMKLKNINPDVYTFNILIDALAK------EGKID-EAMSLFEEMKHKNMFPNIVTYT 310
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LI LCK E AI L +M E G PN ++ +L+ +L + R+ + +
Sbjct: 311 SLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVK 370
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
GY + + Y + LC M + KM+ G P++ T+ ++ + DKA
Sbjct: 371 GYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKA 430
Query: 435 NALFDEAVRNGV 446
E + G+
Sbjct: 431 EKFLREMIARGL 442
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 133/315 (42%), Gaps = 30/315 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ LV+ R V+ F++ E + G D +L +++ C + ++A + +
Sbjct: 68 LSSLVKNKRYPTVISLFKQFEPN-GITPDLCTLSILINCFCHLTHITFAFSVFANILKRG 126
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD---------CVS 279
+ P+ + LIKG C G++ A ++ GF+L V+Y +++ V+
Sbjct: 127 YHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVA 186
Query: 280 KLCRKKDPF-------------------RLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L RK + +L +A + +M G+ NV T+ LI
Sbjct: 187 RLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGF 246
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C + ++A L M +P+ TF +LI +L + ++ E + + MK
Sbjct: 247 CIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNI 306
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + LC +E+A+++ +KMK G P+ +Y +L+ C R++ A F
Sbjct: 307 VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQH 366
Query: 441 AVRNGVEVKPKEYRV 455
+ G + + Y V
Sbjct: 367 LLVKGYHLNVRTYNV 381
>gi|302795027|ref|XP_002979277.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
gi|300153045|gb|EFJ19685.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
Length = 570
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 20/259 (7%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
S L+V CE G A +LVK+ A ++ P++ ++KG+C G+++E A E
Sbjct: 4 SYNLLVRGYCETGEVCKALRLVKEMKARDLAPNETTHGEILKGFCQIGRMEE----ALEH 59
Query: 260 YRGGFELGTV---AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+R + V YN ++D K+ + D F L AE++++D+ + +P V T N L
Sbjct: 60 FRSVIDTSGVDPAMYNTLIDGFCKVAKLSDAFNL---AEEMIVDLGW--MPSAV-TCNTL 113
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL----VLIKSLYQAARVGEGDEMIDRMK 372
++ LCK + A+KLF RM E + L LI L +A RV E E++
Sbjct: 114 VAGLCKAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFEGC 173
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCAHNRV 431
I Y + LC +R+E + + E+M T G NPD+ TY+ ++ +C + V
Sbjct: 174 KDKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMV 233
Query: 432 DKANALFDEAVRNGVEVKP 450
++A LF V G + P
Sbjct: 234 EQALELFSN-VTQGNKCAP 251
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 12/286 (4%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
+K ++ T I L ++ R L E M G D + +V CE
Sbjct: 175 DKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVE 234
Query: 217 YAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
A +L + N+ PD + L+ G C G+ +A L EM R G + + Y C+
Sbjct: 235 QALELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVY-CL 293
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLISNLCKIRRSEDAIK-L 332
+ + +LC + +A K+L + G P N T+ +++ L K R E A + L
Sbjct: 294 M--IEELCNSGEA----DKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHL 347
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
+ P+ T +I L ++ R E + M G Y L LC
Sbjct: 348 KGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCK 407
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
++ +A++ F +M+ +G P TY++L+ +C ++++A A+F
Sbjct: 408 AAKMGEALAFFHEMQDEGL-PSVVTYNILLDGFCKVVKIEEACAVF 452
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 13/279 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P + ID + + + E M D G+ + +V LC+ G A KL
Sbjct: 71 PAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKAGSFDKAVKLF 130
Query: 223 KDTA-----NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
A N + LI G C G++DEA L E + + V Y ++
Sbjct: 131 TRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFEGCKDKAMINAVTYGILIQG 190
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ K R +D RL E G+ + T+N +++ C++ E A++LF +
Sbjct: 191 LCKSKRVEDGLRLLEEMST------SRGLNPDAATYNSIVAGFCELDMVEQALELFSNVT 244
Query: 338 EWG-CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ C P+ L+ L ++ R + E+++ M G + Y + LC
Sbjct: 245 QGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEA 304
Query: 397 EQAMSVFEKMKTDGHNP-DSETYDLLMTKWCAHNRVDKA 434
++A + + G P ++ TY +++ +R +KA
Sbjct: 305 DKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKA 343
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 47/252 (18%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
NK P + + ++ L ++GR Q L E M+R G + L++E+LC +G A
Sbjct: 247 NKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDR-VGCQPSSQVYCLMIEELCNSGEAD 305
Query: 217 YAEKLVKDT--------------------------------------ANEIFPDDKICDL 238
A KL+ +T ++ P
Sbjct: 306 KACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVTSCA 365
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C G+ EA+ M + G + T YN +L LC+ EA
Sbjct: 366 IIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLL---GGLCKAAKM----GEALAFF 418
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M+ G+P +V T+N+L+ CK+ + E+A +F M + C P T+ L + ++
Sbjct: 419 HEMQDEGLP-SVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRS 477
Query: 359 ARVGEGDEMIDR 370
++ E + D+
Sbjct: 478 GKMAEDYQFADQ 489
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 129/335 (38%), Gaps = 61/335 (18%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-G 263
+++ C+ G A + + + D + + LI G+C KL +A LA EM G
Sbjct: 43 ILKGFCQIGRMEEALEHFRSVIDTSGVDPAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLG 102
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM----EYNGVPRNVETFNVLISN 319
+ V N + V+ LC K F +A K+ M + N + N LI
Sbjct: 103 WMPSAVTCNTL---VAGLC-KAGSF---DKAVKLFTRMAERTKRNSTMVTLAAANALIDG 155
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA-GYAI 378
LC+ R ++A++L + + N T+ +LI+ L ++ RV +G +++ M ++ G
Sbjct: 156 LCRAGRVDEALELVFEGCKDKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNP 215
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVF----------------------------------- 403
Y + C ++ +EQA+ +F
Sbjct: 216 DAATYNSIVAGFCELDMVEQALELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALEL 275
Query: 404 -EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
E+M G P S+ Y L++ + C DKA L E +R G P
Sbjct: 276 LEEMDRVGCQPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRA---------PANTGT 326
Query: 463 PIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKP 497
+ G + PEK RR LK I S + P
Sbjct: 327 YTMIVDGLYKTHRPEK---ARRHLKGILSSSLSAP 358
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V ++N+L+ C+ A++L M PNETT ++K Q R+ +E +
Sbjct: 1 SVASYNLLVRGYCETGEVCKALRLVKEMKARDLAPNETTHGEILKGFCQIGRM---EEAL 57
Query: 369 DRMKSA--GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKW 425
+ +S + Y + C + ++ A ++ E+M D G P + T + L+
Sbjct: 58 EHFRSVIDTSGVDPAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGL 117
Query: 426 CAHNRVDKANALF 438
C DKA LF
Sbjct: 118 CKAGSFDKAVKLF 130
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 130/327 (39%), Gaps = 40/327 (12%)
Query: 140 YFGRRKDFKAIHDFLVD-NKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFK 196
+ GR +D K +++ L + K + P T ++ L +A R + L F+R+
Sbjct: 290 WLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRL------- 342
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
R K V + PD + + LI G C GK ++ L
Sbjct: 343 RGKGGSNWV----------------------GVEPDVVLFNTLIDGLCKVGKEEDGLSLL 380
Query: 257 REMYRGGFEL-GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
EM G TV YNC++D K D A ++ M GV NV T N
Sbjct: 381 EEMKMGNINRPNTVTYNCLIDGFFK------AGNFD-RAHELFRQMNEEGVQPNVITLNT 433
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ LCK R A++ F M G N T+ LI + + + + M S+G
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSG 493
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ YY ++ LC R+ A V K+K G + D Y++L++ +C ++++
Sbjct: 494 CSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVY 553
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKK 462
L E GV+ Y YL K
Sbjct: 554 ELLTEMEETGVKPDTITYNTLISYLGK 580
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 13/315 (4%)
Query: 133 TLSFFTDYFGRRKDFKAIHD-FLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T + D F + +F H+ F N+E + P TL + +D L + GR + + FF M
Sbjct: 395 TYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM 454
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGK 248
+ G K + + ++ C + A + ++ ++ PD + LI G C+ G+
Sbjct: 455 -KGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGR 513
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+++A + ++ GF L YN + +S C+KK R+ ++L +ME GV
Sbjct: 514 MNDASVVVSKLKLAGFSLDRSCYNVL---ISGFCKKKKLERV----YELLTEMEETGVKP 566
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+ T+N LIS L K A K+ +M + G P+ T+ +I + V EG ++
Sbjct: 567 DTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIF 626
Query: 369 DRMKSAGYAIGKKDYYEFLT-RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
M S Y L LC +++A+S+ E MK P++ TY+ ++
Sbjct: 627 GEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRD 686
Query: 428 HNRVDKANALFDEAV 442
+ KA L D V
Sbjct: 687 KKMLHKAFELMDRMV 701
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 138/308 (44%), Gaps = 32/308 (10%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
P+ + L+++GR L + M + + GF + +V +L +G + ++
Sbjct: 174 PQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGE---IVFGELVRSGRSFPDGEV 230
Query: 222 VKDTAN----EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
V A +FPD L+ C D K A + + R G + + N +L
Sbjct: 231 VGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALL-- 288
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM- 336
+ L R +D R++ ++L +ME + +V TF +L+++LCK RR ++A+++F R+
Sbjct: 289 -TWLGRGRDIKRMN----ELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLR 343
Query: 337 ----GEW-GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
W G P+ F LI L + + +G +++ MK +G + +T C
Sbjct: 344 GKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMK-----MGNINRPNTVTYNC 398
Query: 392 GIE------RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
I+ ++A +F +M +G P+ T + L+ C H RV +A F+E G
Sbjct: 399 LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458
Query: 446 VEVKPKEY 453
++ Y
Sbjct: 459 LKGNAATY 466
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 125/282 (44%), Gaps = 11/282 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANE 228
+ RL ++G V FF M G + ++++ LC+ G + +L V+
Sbjct: 261 LHRLSKSGNGQLVRKFFNDM-IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 319
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + LI G+ G L+E L EM G + YN +++C K + F
Sbjct: 320 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 379
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
SE M+ NG+ NV T++ LI CK + AIKLF M G PNE T+
Sbjct: 380 EYFSE-------MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTY 432
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + +A + E ++++ M AG + Y L LC R+ +A VF M
Sbjct: 433 TSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 492
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
DG +P+ + Y L+ + R++ A + + +KP
Sbjct: 493 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE--CNIKP 532
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 12/325 (3%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S D F + + VD + L P T S ID +AG T+ M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
+ G K + + +++ LC+ G AE++ + + I P+ ++ L+ G+ +
Sbjct: 456 LQA-GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+++A ++ ++M + + Y I + C ++ +L+ E + +L +M+ G+
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSI---IWGHCSQR---KLE-ETKLILEEMKSRGISA 567
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N +I K +S DA+ F M + G T+ VLI L +A V +
Sbjct: 568 NPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYF 627
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
RM S G Y + LC IE A +F++M+ G PD + L+ H
Sbjct: 628 CRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 687
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
+ +A L +E Y
Sbjct: 688 GNLQEALVLISRMTELAIEFDLHVY 712
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 132/327 (40%), Gaps = 12/327 (3%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T + DY + D + V +E+ L P T S ID + G +V F M
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGK 248
+D G D + ++ C+ A E + N + P+ LI +C +G
Sbjct: 351 -KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 409
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+ A +L +M R G Y ++D C+ + +EA K+L DM GV
Sbjct: 410 MQGAIKLFVDMRRTGLLPNEFTYTSLIDAN---CKAGNL----TEAWKLLNDMLQAGVKL 462
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N+ T+ L+ LCK R +A ++F M + G PN+ + L+ +A R+ + +++
Sbjct: 463 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 522
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M Y + C ++E+ + E+MK+ G + + ++ +
Sbjct: 523 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 582
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRV 455
+ A F E GVE Y V
Sbjct: 583 GKSSDALNFFQEMQDVGVEATIVTYCV 609
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 167/456 (36%), Gaps = 62/456 (13%)
Query: 16 QPPHRFISPQSTYFSR--FSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLE 73
P S + SR F T +L PF S +N + + SL + +
Sbjct: 56 NPSSSLTSINAYCISRPFFWFTSFLCIFRLPFVSYSNAN----NSFQYLDIGSLRKIIQQ 111
Query: 74 NLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDET 133
+L DP ++ ++F P V L E + L F W F HT E+
Sbjct: 112 DLWNDP-----KIVVLFDSALA-PIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTES 165
Query: 134 LSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
R + + HD + KEV+ ++ + G P V F+ +
Sbjct: 166 YCIIVHLVFRARMYTDAHDTV---KEVI--------MNSRMDMGFP--VCNIFDMLWS-- 210
Query: 194 GFKRDKDSLRLVVEKLCENG-------YASYAEKLVKDTANEIF---------PDDKICD 237
+C +G ++ + E + + ANE F P + C+
Sbjct: 211 ------------TRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCN 258
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+ G ++ +M G YN ++D LC++ D + ++
Sbjct: 259 FLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMID---YLCKEGDL----ENSRRL 311
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ M G+ +V T+N LI K+ E+ LF M + GC P+ T+ LI +
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
++ E MK+ G Y + C ++ A+ +F M+ G P+ T
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
Y L+ C + +A L ++ ++ GV++ Y
Sbjct: 432 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 467
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 115/315 (36%), Gaps = 30/315 (9%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
L T + +D L +AGR + F M +D G ++ +V + A K
Sbjct: 462 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKD-GISPNQQVYTALVHGYIKAERMEDAMK 520
Query: 221 LVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++K T I PD + +I G C KL+E K + EM G V I+D
Sbjct: 521 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 580
Query: 280 KLCRKKDPFRLDSEAEKV-----------LLD-----------------MEYNGVPRNVE 311
K + D E + V L+D M G+ NV
Sbjct: 581 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVA 640
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+ LI LCK E A KLF M G P+ T F LI + + E +I RM
Sbjct: 641 VYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 700
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
Y ++ + QA F +M G P+ L+ ++ ++
Sbjct: 701 TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQL 760
Query: 432 DKANALFDEAVRNGV 446
D+A L +E R G+
Sbjct: 761 DEAIELKNEMERMGL 775
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 158/335 (47%), Gaps = 21/335 (6%)
Query: 98 SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFK---AIHDFL 154
++ ++ +S + +A+ FN W+ + + F HT ET + D G+ +F+ A+ + +
Sbjct: 49 TVCEALTCYSNDWQKALEFFN-WVERESGFRHTTETFNRVIDILGKYFEFEISWALINRM 107
Query: 155 VDNKE-VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+ N E V T R V A + + +++++ D+ RD+ S +V+ LCE+
Sbjct: 108 IGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLD-DFNL-RDETSFYNLVDALCEHK 165
Query: 214 YASYAEKLV--KDTANEIFP--DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ AE+L K+ F + KI +L+++GW G + K ++M G
Sbjct: 166 HVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLF 225
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+Y+ +D +C+ P++ A K+ +M+ + +V +N +I + + E
Sbjct: 226 SYSIYMDI---MCKSGKPWK----AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
I++F M E GC PN T +IK L + R+ + M+D M G Y +R
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSR 338
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
L E+ + +S+F +M G P +TY +LM K
Sbjct: 339 L---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRK 370
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 150/329 (45%), Gaps = 27/329 (8%)
Query: 139 DYFGRRKDFKAIHDFL--VDNKEV---LGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
D + R+KD + + L ++N+ + +G T+ +D L A ++V F M+ +
Sbjct: 174 DCYVRQKDDGRVQEILEIMENEGIEATVGTYTI--LVDSLSTARDISKVEALFNEMKAN- 230
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
D V+ C G A K++ + N + P+++ +LIKG+C G+++ A
Sbjct: 231 NVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAA 290
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKK---DPFRLDSEAEKVLLDME---YN-- 304
+ L +M G L + +N ++D CRK D ++ + EK+ +++ YN
Sbjct: 291 EMLLADMQGQGVGLNQIIFNTMID---GYCRKGMVDDALKIKAAMEKIGVELNIYTYNTL 347
Query: 305 -------GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
GV N T+ LIS CK +A +LF M E G P+ T+ V+I +
Sbjct: 348 ACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAK 407
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
R+ E + M+ G+ Y + C +++ A+ +FE+MK G P+
Sbjct: 408 KGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVA 467
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y L++ R + A L+D+ ++ G+
Sbjct: 468 YTALISGLAKEGRSEAAFQLYDDMLKAGL 496
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 41/293 (13%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
L P++L + L RAGR G ER C + +A
Sbjct: 93 LDPRSLTFSLLSLRRAGRLADAAGLLERALGS-----------------CPGSVSPFAAS 135
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+V D G C G++D+A+RL +M R G L + YN +LDC
Sbjct: 136 VVVD-----------------GLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDC--- 175
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
R+KD D +++L ME G+ V T+ +L+ +L R LF M
Sbjct: 176 YVRQKD----DGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANN 231
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
+ + +I + +A + +++D G ++ Y + C I ++E A
Sbjct: 232 VVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAE 291
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ M+ G + ++ ++ +C VD A + + GVE+ Y
Sbjct: 292 MLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTY 344
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 5/194 (2%)
Query: 298 LLDMEYNGVPRNVETF--NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
LL+ P +V F +V++ LCK R +DA +L M G N + L+
Sbjct: 117 LLERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCY 176
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ G E+++ M++ G Y + L I + ++F +MK + D
Sbjct: 177 VRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDV 236
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
Y ++ +C + +A + DE V NGVE + Y V +K + + + E L
Sbjct: 237 YLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGV---LIKGFCKIGQMEAAEML 293
Query: 476 PEKMARKRRRLKQI 489
M + L QI
Sbjct: 294 LADMQGQGVGLNQI 307
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C++G A +L ++ A + P ++I G+ G++ EA+R +EM + GF
Sbjct: 371 CKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDV 430
Query: 269 VAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
Y ++ CV+ ++D A K+ +M+ G NV + LIS L K RS
Sbjct: 431 YTYASLVHGHCVNG--------KVDV-ALKLFEEMKQRGTEPNVVAYTALISGLAKEGRS 481
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
E A +L+ M + G P+++ + L+ SL+ R
Sbjct: 482 EAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 515
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 21/252 (8%)
Query: 212 NGYASYAEKLVK----DTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLARE 258
Y+S L K D A+ +F PD + LI G C GK+ +A ++
Sbjct: 116 QAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQ 175
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M + G + YN +L LC +A + +M+ + +V T+N L+
Sbjct: 176 MPKHGCQPNVPVYNVLLH---GLCSSGQL----EQANTLFAEMKSHSCSPDVVTYNTLLD 228
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
+CK RR E+ KLF M G PN TF LI L + + + E+ M AG
Sbjct: 229 AVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKP 288
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
K Y ++ LC E++ QA +FEKM PD+ Y+ L+ +C +D+A L+
Sbjct: 289 NKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 348
Query: 439 DEAVRNGVEVKP 450
E + G ++P
Sbjct: 349 RE-MSGGAGLQP 359
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 43/278 (15%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I L R G + L F M + G K +K + ++ LC A +L +
Sbjct: 257 TFSTLIHGLCRTGELEKALEVFGSM-LEAGCKPNKYTYTTLISGLCRAEKVIQARELFEK 315
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D + + LI G+C G +DEA++L REM G
Sbjct: 316 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA-------------------- 355
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
G+ + TFN LI CK+ + A +L MG G
Sbjct: 356 ---------------------GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAA 394
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +LI L +A ++ E E+ +M+ + + F+ LC I+QA +VF
Sbjct: 395 DSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVF 454
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
E + G P+ ET+ +L RV+ A L + A
Sbjct: 455 EATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 492
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 12/240 (5%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
LV E E Y E + ++F + + ++G+ +++A+ + + M G
Sbjct: 20 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGV----MQGFARSNNMEKAREVYQHMVESG 75
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
++ V+Y+ ++ ++K+ +LD E+ K+L +M G +++ ++ L+ L K
Sbjct: 76 YKPDNVSYHILIHGLAKI------GKLD-ESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR + A LF M G HP+ F LI L QA +V + E +M G Y
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
L LC ++EQA ++F +MK+ +PD TY+ L+ C RV++ LF EA+R
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF-EAMR 247
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 29/286 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKR--DKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
++ ++ AG V F M+ GF R + + R V + + E+GY
Sbjct: 33 LEEMMAAGCNPDVFAFNGVMQ---GFARSNNMEKAREVYQHMVESGYK------------ 77
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
PD+ +LI G GKLDE+ ++ EM G AY+ ++ ++K R+ D
Sbjct: 78 ---PDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAK-ARRVD- 132
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
A + +M G + F LI LC+ + +DA + F +M + GC PN
Sbjct: 133 -----HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPV 187
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ VL+ L + ++ + + + MKS + Y L +C R+E+ +FE M+
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR 247
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G+ P+ T+ L+ C ++KA +F + G KP +Y
Sbjct: 248 AAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG--CKPNKY 291
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 145/380 (38%), Gaps = 80/380 (21%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLV 222
+ +S + L +A R F+ M R G D+ ++ LC+ G A E+
Sbjct: 116 QAYSSLVRALAKARRVDHASSLFDEMIRG-GHHPDRLMFYELILGLCQAGKVKDASERFK 174
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + P+ + ++L+ G C G+L++A L EM V YN +LD V K
Sbjct: 175 QMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKA- 233
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R E K+ M G NV TF+ LI LC+ E A+++F M E GC
Sbjct: 234 ------RRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 287
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSA--------------GYAI-GKKDYYEFL 387
PN+ T+ LI L +A +V + E+ ++M A GY G D E L
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347
Query: 388 TR---------------------LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW- 425
R C + ++ +A + +M T G DS TY +L+
Sbjct: 348 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLS 407
Query: 426 ----------------------------------CAHNRVDKANALFDEAVRNGVEVKPK 451
C +D+A A+F+ ++G P+
Sbjct: 408 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 467
Query: 452 EYRVDPRYLKKPIAVKKGKK 471
+R+ L K V+ +K
Sbjct: 468 TFRILSESLIKLGRVEDAQK 487
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 70/140 (50%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ NV T++ +I +L K + E++ K+ M GC+P+ F +++ ++ + +
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
E+ M +GY Y+ + L I ++++++ + +M G P + Y L+
Sbjct: 66 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125
Query: 426 CAHNRVDKANALFDEAVRNG 445
RVD A++LFDE +R G
Sbjct: 126 AKARRVDHASSLFDEMIRGG 145
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E+ KVL +M G +V FN ++ + E A +++ M E G P+ ++ +LI
Sbjct: 28 ESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILI 87
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L + ++ E +++ M G + Y + L R++ A S+F++M GH+
Sbjct: 88 HGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH 147
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD + L+ C +V A+ F + ++G + Y V
Sbjct: 148 PDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190
>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 369
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 10/290 (3%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
++ +VD+K + ++ RAGR +E M R+ R S +++ L
Sbjct: 12 VYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGRE--GNRSVASFNIMMRGL 69
Query: 210 CENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
+NG + + + +D I +L+ G+C +G ++++ R+ R G L
Sbjct: 70 FDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDA 129
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
AY+ + ++ LC++ +A VL M +G N +N LI+ L +SED
Sbjct: 130 FAYSAM---INGLCKETKL----EKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSED 182
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
AI++F MG C P T+ +LI L ++ R GE +++ M G Y +
Sbjct: 183 AIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMK 242
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LC +IE A+ ++ ++ +G PD + ++ L+ C+ + A +L+
Sbjct: 243 GLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLY 292
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 126/275 (45%), Gaps = 11/275 (4%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC 236
GR +V +E M++ G+ D + ++V C+NGY + + ++++ + D
Sbjct: 73 GRVDEVNSIWELMKKG-GYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDAFA 131
Query: 237 -DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+I G C + KL++A + M + G + T YN +++ + + +D R
Sbjct: 132 YSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIR------ 185
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
V +M + T+N+LI+ LCK R +A L M E G P+ T+ +L+K L
Sbjct: 186 -VFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGL 244
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ ++ +++ G+ + + + LC + + + A+S++ M P+
Sbjct: 245 CLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNL 304
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
T + LM + + A ++ ++N E++P
Sbjct: 305 VTQNTLMEGFYKDGDMRNALVIWARILKN--ELQP 337
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 21/285 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKD------SLRLVVEKLCENGYASYAEKLVK 223
+D LV+ GR F+ M + YG + + +++ C G A +L
Sbjct: 165 LDGLVKKGR-------FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFD 217
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + IFP I +LI+G C + ++ EA+ + R M G YN ++D K+
Sbjct: 218 EMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIA 277
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
K L E M +G+ NV TF +LI LCK A K M +G
Sbjct: 278 HVKKALELYXE-------MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN + LI +A + E + ++ Y + LCG++R+E+A +
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++MK G P++ TY+ L+ +C ++KA + + G+E
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIE 435
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 21/256 (8%)
Query: 205 VVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G S A L + +EI PD +LIKG C +++EA L +EM + G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F V YN ++D C++ + +A +V M G+ N+ TF+ LI CK
Sbjct: 399 FLPNAVTYNTLID---GYCKEGNM----EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ E A+ L+ M G P+ + LI ++ E + M+ AG
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 384 YEFLTRLCGIERIEQAMSVF-EKMKTDGH------------NPDSETYDLLMTKWCAHNR 430
+ LC RI A+ +F K TD +P+ Y L+ C R
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571
Query: 431 VDKANALFDEAVRNGV 446
+ KA+ F + +G+
Sbjct: 572 IFKASKFFSDMRCSGL 587
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 8/236 (3%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVD 246
R R+ G + + +++ C+ + A +L + + + P+ +LI G C
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKT 311
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
++ A++ +M G YNC++D K + L SE EK + +
Sbjct: 312 DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK-------HEI 364
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T+++LI LC + R E+A L M + G PN T+ LI + + + E
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ +M G + + C ++E AM ++ +M G PD Y L+
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 142/357 (39%), Gaps = 33/357 (9%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASC-IDRLVRAGRPTQVLGFFERM 189
T D + + + FL+D V+ + +C ID +AG ++ L +
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGK 248
E+ + D + ++++ LC A+ L+++ + F P+ + LI G+C +G
Sbjct: 360 EK-HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGN 418
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+++A + +M G E + ++ ++D K + + L +E M G+
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE-------MVIKGLLP 471
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V + LI K +++A +L M E G HPN T LI L + R+ + ++
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Query: 369 DRMKSAGYAIGKKD--------------YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
K+ G K Y + LC RI +A F M+ G PD
Sbjct: 532 -LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV------DPRYLKKPIA 465
T +++ + L + ++ G+ YRV + YLK ++
Sbjct: 591 VFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALS 647
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 120/298 (40%), Gaps = 11/298 (3%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWC 244
R +G D +L +V+ LC +A L K PD LI+G C
Sbjct: 92 LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 151
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
V+GK+ EA L +M GF+ V Y + ++ LC+ + S A ++L ME
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTL---INGLCKVGNT----SAAIRLLRSMEQG 204
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
NV F+ LI +LCK R+ +A +F M G PN T+ LI L +
Sbjct: 205 NCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 264
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+++ M + + LC + +A V + M G P+ TY+ LM
Sbjct: 265 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 324
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
C N VD A +FD V Y + ++ K L E+M+R+
Sbjct: 325 HCLRNEVDVAVKVFDTMVHKDCVANVISYNT---LINGYCKIQSVDKAMYLFEEMSRQ 379
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 124/303 (40%), Gaps = 30/303 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L G+ + L F++M + GF+ + + ++ LC+ G S A +L++
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ + LI C D ++ EA + EM G V YN ++ + KLC
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260
Query: 284 KK----------------DPFRLDS------------EAEKVLLDMEYNGVPRNVETFNV 315
K D F L++ EA V+ M + GV NV T+N
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ C + A+K+F M C N ++ LI + V + + + M
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC + R++ A+S+F +M G PD TY L C + +DKA
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 440
Query: 436 ALF 438
AL
Sbjct: 441 ALL 443
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 12/286 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D +L VV+ LC+ G + A +V + + P+ + L+ G C+ ++D A ++
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M ++YN +++ K+ L E M + N T+N L
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE-------MSRQELTPNTVTYNTL 391
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I LC + R +DAI LF+ M G P+ T+ L L + + + ++ ++ + +
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y L +C +E A +F + + G P+ TY++++ C + +A+
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511
Query: 437 LFDEAVRNGVEVKPKEYRVDPR-YLKKPIAVKKGKKRETLPEKMAR 481
LF E +NG Y + R +L+ A+ + E L E +AR
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEAL---RTIELLEEMLAR 554
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
LDEA M TV +N +L ++K L + M+ G+P
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ-------MDSFGIPP 103
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T ++I++LC + R + A ++ + G P+ TTF LI+ L ++GE +
Sbjct: 104 DVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF 163
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
D+M G+ Y + LC + A+ + M+ P+ + L+ C
Sbjct: 164 DKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223
Query: 429 NRVDKANALFDEAVRNGVE 447
+V +A +F E + G+
Sbjct: 224 RQVTEAFNIFSEMITKGIS 242
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 124/305 (40%), Gaps = 9/305 (2%)
Query: 145 KDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
K + + +VD+K + TL + +D L + G + + M G + + +
Sbjct: 262 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH-RGVEPNVVTYNA 320
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C A K+ ++ + I + LI G+C +D+A L EM R
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
TV YN ++ + + R +D L E M G ++ T+ L LCK
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHE-------MVARGQIPDLVTYRTLSDYLCKN 433
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R + A+ L + P+ + ++ + +A + + ++ + S G Y
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC + +A +F +M +G +P+ TY+L+ + +N + L +E +
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553
Query: 444 NGVEV 448
G V
Sbjct: 554 RGFSV 558
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 148 KAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
KA++ F +++ L P T+ + I L GR + F M G D + R +
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA-RGQIPDLVTYRTL 426
Query: 206 VEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LC+N + A L+K + PD +I ++ G C G+L++A+ L + G
Sbjct: 427 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 486
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ YN + + LC++ L +EA K+ +M NG N T+N++ +
Sbjct: 487 QPNVWTYNIM---IHGLCKQG----LLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+ I+L M G + +T +L+ L
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGML 570
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
F EA M + P + FN L++++ K + + L +M +G P+ T
Sbjct: 48 FNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYT 107
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++I SL RV + ++ G+ + + LC +I +A+ +F+KM
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167
Query: 408 TDGHNPDSETYDLLMTKWC 426
+G P+ TY L+ C
Sbjct: 168 GEGFQPNVVTYGTLINGLC 186
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 147/366 (40%), Gaps = 46/366 (12%)
Query: 120 WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKT---LASCIDRLVRA 176
+ +Q NF H+ + GR + F I D L ++ P T I A
Sbjct: 73 YASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEA 132
Query: 177 GRPTQVLGFFERM-----------------------------------ERDYGFKRDKDS 201
P +VL F +M R +G + S
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 202 LRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
L+++ C N S A +L K ++ PD +LI+G+C G+++ A L +M
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
GF ++Y +L+ LCRK EA K+L M+ G ++ +N +I
Sbjct: 253 NKGFVPDRLSYTTLLN---SLCRKTQL----REAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C+ R+ DA K+ M GC PN ++ LI L EG + ++ M S G++
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 365
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ C ++E+A V E + +G S+T+++++ C + +K ++
Sbjct: 366 SVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLED 425
Query: 441 AVRNGV 446
AV+ +
Sbjct: 426 AVKEEI 431
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+GV N ++N+L+ C A +LF +M E P+ ++ +LI+ + +V
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
E++D M + G+ + Y L LC ++ +A + +MK G NPD Y+ ++
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+C +R A + D+ + NG YR
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYR 334
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDY--GFKR-DKDSLRLVVEKLCENGYASYAEKLVKDT- 225
I L +AGR F+ M+ D+ G R D+ + +++ C+ G+ A LV
Sbjct: 249 ISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMR 308
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ + + G +G++ EA+ L REM G + + YN I VS LC++
Sbjct: 309 CGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNII---VSGLCKEG 365
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
F +A +V + + +V T+ L+ C A ++ M + GC PN
Sbjct: 366 KAF----DARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNS 421
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ VL++SL++A R E + +++RM GY++ + LC R++ AM + +
Sbjct: 422 FTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDG 481
Query: 406 MKTDGHN-----------------------PDSETYDLLMTKWCAHNRVDKA 434
M +G PD TY +L++ C R D+A
Sbjct: 482 MWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEA 533
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 17/268 (6%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-----PDDKICDLL 239
ERM R G + + + LC+ G A ++ +D + PD D++
Sbjct: 229 LVERM-RVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVM 287
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ G+C G +DEA+ L M GGF +YN L + + R EA+++L
Sbjct: 288 LSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRV-------GEAQELLR 340
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDA--IKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M + G+ N T+N+++S LCK ++ DA ++ F R G P+ T+ L+ +
Sbjct: 341 EMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMS--PDVVTYTSLLHAYCS 398
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ + ++D M G A Y L L R +A + E+M G++ D+
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNG 445
++++ C ++R+D A + D G
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEG 486
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 25/262 (9%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYR- 261
++++ L G + AE+L++ + + D C+++I G C + +LD A + M+
Sbjct: 426 VLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEE 485
Query: 262 GGFELG-------------TVAYNCILD------CVSKLCRKKDPFRLDSEAEKVLLDME 302
G LG +++ C+ D +S LC++ R D EA+K LL+M
Sbjct: 486 GSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEG---RFD-EAKKKLLEMI 541
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
+ + ++ I CK ++ AIK+ M + GC+P+ T+ +LI+ + +
Sbjct: 542 VKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSE 601
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E +++ MK G + Y + C + +AM + ++M + P+ ++DLL+
Sbjct: 602 EIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLI 661
Query: 423 TKWCAHNRVDKANALFDEAVRN 444
+C A +FD A+R
Sbjct: 662 KAYCKITDFPSAQMVFDAALRT 683
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+C+ ++ G+C +G ++EA+RL M G V +N + + K R D +R+ +
Sbjct: 209 VCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDM 268
Query: 295 EKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
++ D ++ G+PR + TF+V++S C ++A L M G ++ +
Sbjct: 269 QE---DWQH-GLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLS 324
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L + RVGE E++ M G Y ++ LC + A V +++ +P
Sbjct: 325 GLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSP 384
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE 473
D TY L+ +C+ + AN + DE + G Y V L+ + + E
Sbjct: 385 DVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNV---LLQSLWRAGRTTEAE 441
Query: 474 TLPEKMARK 482
L E+M K
Sbjct: 442 RLLERMNEK 450
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 122/286 (42%), Gaps = 31/286 (10%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GF R +S + L NG A++L+++ A+E I P+ ++++ G C +GK +A
Sbjct: 311 GFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDA 370
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+R+ + G V Y +L C K + + A ++L +M G N T
Sbjct: 371 RRVENFIRSGVMSPDVVTYTSLL---HAYCSKGNI----AAANRILDEMAQKGCAPNSFT 423
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NVL+ +L + R+ +A +L RM E G + ++I L + +R+ +++D M
Sbjct: 424 YNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMW 483
Query: 373 SAGY-AIGKKD----------------------YYEFLTRLCGIERIEQAMSVFEKMKTD 409
G A+G+ Y ++ LC R ++A +M
Sbjct: 484 EEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVK 543
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+PDS YD + +C H + A + + + G + Y +
Sbjct: 544 DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNL 589
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 121/305 (39%), Gaps = 32/305 (10%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
LVR GR + M + G + + + ++V LC+ G A A ++ + + P
Sbjct: 326 LVRNGRVGEAQELLREMAHE-GIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSP 384
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D L+ +C G + A R+ EM + G + YN +L + + R
Sbjct: 385 DVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRT------- 437
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG----------- 340
+EAE++L M G + N++I LC+ R + A+ + M E G
Sbjct: 438 TEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSF 497
Query: 341 ------------CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
C P++ T+ +LI +L + R E + + M + Y F+
Sbjct: 498 LSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIH 557
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
C + A+ V M+ G NP + TY+LL+ + ++ ++ L E G+
Sbjct: 558 GYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISP 617
Query: 449 KPKEY 453
Y
Sbjct: 618 NVMTY 622
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 23/231 (9%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD +LL++ C G+++ A+R+ M R F G +A CR
Sbjct: 143 PDVFTRNLLLQALCDAGRMELAQRVFDAMPARNEFSFGILARG--------YCRAGRSI- 193
Query: 290 LDSEAEKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A KVL +G+P N+ N +++ CK E+A +L RM G PN TF
Sbjct: 194 ---DALKVL-----DGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTF 245
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSA-GYAIGKKDYYEF---LTRLCGIERIEQAMSVFE 404
I +L +A RV + + M+ + + + D F L+ C +++A + +
Sbjct: 246 NARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVD 305
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M+ G E+Y+ ++ + RV +A L E G++ Y +
Sbjct: 306 IMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNI 356
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 142/353 (40%), Gaps = 30/353 (8%)
Query: 118 NHWLTQNANFSHTDETLSFFTDYFG------------------RRKDFKAIHDFLVDNK- 158
N L + A TD+ FF D G + D +A + K
Sbjct: 99 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158
Query: 159 EVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
L P T+ S ID + GR + FFE M +D + D + ++ C+ G
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLP 217
Query: 217 YAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
+ ++ N + P+ L+ +C +G + +A + +M R G Y ++
Sbjct: 218 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 277
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
D K+ D FRL +E +V GV NV T+ LI LC R ++A +LF +
Sbjct: 278 DANCKIGNLSDAFRLGNEMLQV-------GVEWNVVTYTALIDGLCDAERMKEAEELFGK 330
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M G PN ++ LI +A + E+++ +K G Y F+ LC +E+
Sbjct: 331 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 390
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
IE A V +MK G +S Y LM + + L DE +EV
Sbjct: 391 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 443
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FP + C+ L+ + GK D+ KR ++M G YN ++DC +C++ D
Sbjct: 91 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC---MCKEGDV- 146
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A + +M++ G+ + T+N +I K+ R +D + F M + C P+ T+
Sbjct: 147 ---EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 203
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + ++ G E MK G Y + C ++QA+ + M+
Sbjct: 204 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 263
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G P+ TY L+ C + A L +E ++ GVE
Sbjct: 264 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 302
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 127/319 (39%), Gaps = 45/319 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ + G+ L F+ M+ + G K + S +V+ C+ G A K D
Sbjct: 202 TYNALINCFCKFGKLPIGLEFYREMKGN-GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD 260
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P++ LI C G L +A RL EM + G E V Y ++D + R
Sbjct: 261 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 320
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN------------------------ 319
K EAE++ M+ GV N+ ++N LI
Sbjct: 321 MK-------EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 373
Query: 320 -----------LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
LC + + E A + M E G N + L+ + +++ EG ++
Sbjct: 374 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 433
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCA 427
D MK + + + LC + + +A+ F ++ D G ++ + ++ C
Sbjct: 434 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 493
Query: 428 HNRVDKANALFDEAVRNGV 446
N+V+ A LF++ V+ G+
Sbjct: 494 DNQVEAATTLFEQMVQKGL 512
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 15/288 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG----YASYAEKLVKDT 225
ID + + G G FE M + G D + +++ + G + E++ KD
Sbjct: 137 IDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDM 194
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
E PD + LI +C GKL REM G + V+Y+ ++D C++
Sbjct: 195 CCE--PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD---AFCKEG 249
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ +A K +DM G+ N T+ LI CKI DA +L M + G N
Sbjct: 250 ----MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 305
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L A R+ E +E+ +M +AG Y + + +++A+ + +
Sbjct: 306 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 365
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+K G PD Y + C+ +++ A + +E G++ Y
Sbjct: 366 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 413
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 33/217 (15%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD + I G C K++ AK + EM G + ++ Y ++D K +
Sbjct: 371 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 430
Query: 289 RLDSEAEKVLLDMEYN-------------------------------GVPRNVETFNVLI 317
L E ++ LD+E G+ N F +I
Sbjct: 431 HLLDEMKE--LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 488
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LCK + E A LF +M + G P+ T + L+ ++ V E + D+M G
Sbjct: 489 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 548
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ Y + L ++++A S E+M +G +PD
Sbjct: 549 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D ++G PT+ L + M ++ + + ++++ LC+N S A +N+
Sbjct: 417 MDAYFKSGNPTEGLHLLDEM-KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 475
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ + I +I G C D +++ A L +M + G AY ++D K +
Sbjct: 476 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 535
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
L + ++ G+ ++ + L+ L + + A M G HP+E
Sbjct: 536 LALRDKMAEI-------GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 588
Query: 348 FLVLIKSLYQAARVGEGDEM 367
+ ++K Y+ + E E+
Sbjct: 589 CISVLKKHYELGCIDEAVEL 608
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM---I 368
F+ L S L + E+AI+ F +M + P + L L++ A++G+ D++
Sbjct: 62 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGL---LHRFAKLGKTDDVKRFF 118
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M AG Y + +C +E A +FE+MK G PD+ TY+ ++ +
Sbjct: 119 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 178
Query: 429 NRVDKANALFDE 440
R+D F+E
Sbjct: 179 GRLDDTVCFFEE 190
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 19/238 (7%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKK 285
I PD ++L+ G+C DGK+ E K + M + G + V Y ++D C+ K K
Sbjct: 243 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNK- 301
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
A + M GV + +++N++I+ CKI++ ++A+ LF +M PN
Sbjct: 302 --------ANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS---- 401
T+ LI L ++ ++ +++D M G Y L LC ++++A++
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 413
Query: 402 ----VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
VFE + G+N D Y +++ +C ++A AL + NG K Y +
Sbjct: 414 LKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEI 471
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G C G+ A +L R + + V YN I+D + K+ + F L SE
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE----- 203
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G+ +V T++ LIS + + +DAI LF +M P+ TF +L+ +
Sbjct: 204 --MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 261
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ EG + M G Y + C ++++ +A S+F M G NPD+++Y
Sbjct: 262 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSY 321
Query: 419 DLLMTKWCAHNRVDKANALF 438
++++ +C +VD+A LF
Sbjct: 322 NIMINGFCKIKKVDEAMNLF 341
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAR 257
K S ++ LC+ G A A +L++ ++ P+ + + +I C ++EA L
Sbjct: 143 KVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 202
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM G V Y+ ++ + + KD L ++ M + +V TFN+L+
Sbjct: 203 EMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNK-------MILENIKPDVYTFNILV 255
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
CK + ++ +F M + G PN T+ L+ +V + + + + M G
Sbjct: 256 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVN 315
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y + C I+++++AM++F+KM P+ TY L+ C ++ A L
Sbjct: 316 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKL 375
Query: 438 FDEAVRNGV 446
DE GV
Sbjct: 376 VDEMHDRGV 384
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 9/273 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+ I+ L + G+ L R++ + + +++ +C+ + A L +
Sbjct: 147 GTLINGLCKVGQARAALQLLRRVDGKL-VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 205
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+E I PD LI G+ + GKL +A L +M + +N ++D K + K
Sbjct: 206 SEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 265
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
E + V M G+ NV T+ L+ C +++ A +F M + G +P+
Sbjct: 266 -------EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDT 318
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
++ ++I + +V E + +M Y + LC +I A+ + ++
Sbjct: 319 QSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDE 378
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
M G PD TY ++ C +++VDKA AL
Sbjct: 379 MHDRGVPPDIITYSSILDALCKNHQVDKAIALL 411
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
IF KI L+K C A L R+M G V N +++C S+L + F
Sbjct: 60 IFEFGKILGSLVKINC----YHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSF 115
Query: 289 RLDSEAEK-------VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+ + K + L G+ V ++ LI+ LCK+ ++ A++L R+
Sbjct: 116 SVFANILKKGYDPNVITLTTLIKGLCLKV-SYGTLINGLCKVGQARAALQLLRRVDGKLV 174
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN + +I S+ + V E ++ M S G + Y ++ + +++ A+
Sbjct: 175 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAID 234
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+F KM + PD T+++L+ +C ++ + +F ++ G++
Sbjct: 235 LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 280
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 9/281 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ ID L + F +ME G + D + ++ LC G S A +L+ +
Sbjct: 260 TIIDGLCKYKHIDDAFALFNKMETK-GIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIE 318
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+I P+ LI + +GKL EA++L EM + + Y+ + ++ C
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL---INGFCMHD- 374
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
RLD L + + P NV T+N LI CK +R E+ ++LF M + G N
Sbjct: 375 --RLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI+ L+QA ++ +M S G Y L LC ++E+A+ VFE +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ PD TY++++ C +V+ LF GV+
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 143/349 (40%), Gaps = 34/349 (9%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD +G K T + I L + ++ + ++M + G + D + VV L
Sbjct: 172 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGAVVNGL 230
Query: 210 CENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ G A L+K +I D I + +I G C +D+A L +M G
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDV 290
Query: 269 VAYNCILDCVSKLCRKKDPFRLDS----------------------------EAEKVLLD 300
YN ++ C+ R D RL S EAEK+ +
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + ++ T++ LI+ C R ++A +F M C PN T+ LIK +A R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V EG E+ M G Y + L + A +F+KM +DG PD TY +
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
L+ C + +++KA +F+ ++ +E Y + + K V+ G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 17/287 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
+GR D + +++ K T ++ ID V+ G+ + ++ M KR D
Sbjct: 303 YGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-----IKRSID 357
Query: 201 ----SLRLVVEKLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+ ++ C + A+ + + + + FP+ + LIKG+C +++E L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
REM + G TV YN + + L + D A+K+ M +GVP ++ T+++
Sbjct: 418 FREMSQRGLVGNTVTYNTL---IQGLFQAGDC----DMAQKIFKKMVSDGVPPDIITYSI 470
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ LCK + E A+ +F + + P+ T+ ++I+ + +A +V +G ++ + G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y ++ C E+A ++F +MK DG PDS Y+ L+
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 577
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 7/177 (3%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+YN +++C + R + P L VL M G ++ T + L++ C +R DA
Sbjct: 117 SYNILINCFCR--RSQLPLAL-----AVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 169
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+ L +M E G P+ TF LI L+ + E ++D+M G Y +
Sbjct: 170 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNG 229
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC I+ A+S+ +KM+ D Y+ ++ C + +D A ALF++ G+
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI 286
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEA 294
++LI +C +L A + +M + G+E V + +L+ C SK R D L +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSK--RISDAVALVDQ- 175
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+++M Y P V TFN LI L ++ +A+ L +M + GC P+ T+ ++
Sbjct: 176 ---MVEMGYK--PDTV-TFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNG 229
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + + ++ +M+ Y + LC + I+ A ++F KM+T G PD
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAV 442
TY+ L++ C + R A+ L +
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMI 317
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 19/219 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I +A R + + F M + G + + +++ L + G A+K+ K
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P D I +L+ G C GKL++A + + + E YN +++ + K +
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D + L + GV NV + +IS C+ E+A LF M E G P
Sbjct: 516 VEDGWDL-------FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 344 NETTFLVLIKSLYQAARVGEGD-----EMIDRMKSAGYA 377
+ + LI+ AR+ +GD E+I M+S G+
Sbjct: 569 DSGCYNTLIR-----ARLRDGDKAASAELIKEMRSCGFV 602
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 93/219 (42%), Gaps = 11/219 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ G+C ++ +A L +M G++ TV +N ++ + F
Sbjct: 148 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGL---------FLH 198
Query: 291 DSEAEKVLL--DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +E V L M G ++ T+ +++ LCK + A+ L +M + + +
Sbjct: 199 NKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L + + + + ++M++ G Y ++ LC R A + M
Sbjct: 259 NTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIE 318
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
NP+ T+ L+ + ++ +A L+DE ++ ++
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P VE FN L+S + K+++ + I L RM + ++ +LI + +++
Sbjct: 77 LPSIVE-FNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ +M GY L C +RI A+++ ++M G+ PD+ T++ L+
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGL 195
Query: 426 CAHNRVDKANALFDEAVRNGVE 447
HN+ +A AL D+ V+ G +
Sbjct: 196 FLHNKASEAVALVDQMVQRGCQ 217
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G D + ++ LC+ G L + + P+ LI G C GK+D A
Sbjct: 313 GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLA 372
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ + M G V YN + ++ LC+ D EA +++ +M +G+ + T
Sbjct: 373 LKNFQMMLAQGVRPDLVTYNAL---INGLCKVGDL----KEARRLVNEMTASGLKPDKIT 425
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
F LI CK E A+++ RM E G ++ F LI L + RV + M+ M
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
SAG+ Y + C ++ + ++M++DGH P TY+ LM C ++
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A L D + GV Y +
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNI 568
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 9/266 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ L + GR + F+ M G + + +++ C+ G A K +
Sbjct: 320 TFSALINGLCKEGRLDEGSLLFDEM-CGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQM 378
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + PD + LI G C G L EA+RL EM G + + + ++D C+
Sbjct: 379 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLID---GCCK 435
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D ++S E + M G+ + F LIS LC+ R DA ++ M G P
Sbjct: 436 DGD---MESALE-IKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKP 491
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
++ T+ ++I + V G +++ M+S G+ G Y + LC +++ A +
Sbjct: 492 DDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLL 551
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHN 429
+ M G P+ TY++L+ H
Sbjct: 552 DAMLNVGVAPNDITYNILLDGHSKHG 577
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 150/395 (37%), Gaps = 42/395 (10%)
Query: 85 RLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRR 144
RL I +TP TLN ++L F + L F HT + +
Sbjct: 73 RLKRILPSLTPRHVSKLITLNPLCLPPSSLLSFFNHLASRPPFRHTLHSYCTMLHFLCLH 132
Query: 145 KDFKAIHD---FLVDNKEVLGPKTLASCIDRLV-RAGRPTQVLGF-FERMERDY---GFK 196
+ H FLV K TL S I R + R +G F+ + Y GF
Sbjct: 133 RMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFT 192
Query: 197 RDK-DSLRLVVE-------KLCEN---------------GYASYAEKLVKDTANEIFPDD 233
D RLV + + CEN +A Y E L +I+
Sbjct: 193 PDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIY--- 249
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
++L+ G+C G + A+ + E+ + G V++N ++ K ++ FRL
Sbjct: 250 -FFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGV 308
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
ME GV +V TF+ LI+ LCK R ++ LF M G PN TF LI
Sbjct: 309 -------MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLID 361
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ +V + M + G Y + LC + +++A + +M G P
Sbjct: 362 GQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKP 421
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
D T+ L+ C ++ A + V G+E+
Sbjct: 422 DKITFTTLIDGCCKDGDMESALEIKRRMVEEGIEL 456
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 13/221 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G C G ++E RL M G ++ + ++ LC++ RLD E +
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSAL---INGLCKEG---RLD-EGSLLF 341
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G+ N TF LI CK + + A+K F M G P+ T+ LI L +
Sbjct: 342 DEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV 401
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E +++ M ++G K + + C +E A+ + +M +G D +
Sbjct: 402 GDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAF 461
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
L++ C RV A + + + G KP DP Y
Sbjct: 462 TALISGLCREGRVHDAGRMLTDMLSAG--FKPD----DPTY 496
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 122/275 (44%), Gaps = 15/275 (5%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPD 232
+ GR V FE M G + D +++ LC +G A + V D E + P+
Sbjct: 176 KTGRWESVGKVFEEMS-GRGIEPDVVMYTALIDSLCRHGKVKKAAR-VMDMMTERGLEPN 233
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
++LI C +G + EA L + M G + V YN ++ +S + L+
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSV--------LEM 285
Query: 293 EAEKVLLDMEYNGVPR---NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ LL+ G R ++ TFN +I LCKI A+++ M E GC N F
Sbjct: 286 DEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFN 345
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+LI L + +V + E++D M S+G Y + C + ++E+A S +M+
Sbjct: 346 LLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQ 405
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
G P+ Y L+ C + +A LF+E RN
Sbjct: 406 GMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN 440
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 18/293 (6%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
A C DR R Q +G M+ D G + D + ++ LC+ A +L+ +
Sbjct: 103 ALCADR-----RAAQAVGLLRSMQ-DCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC 156
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
I P+ + L+ G+C G+ + ++ EM G E V Y ++D LCR
Sbjct: 157 ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALID---SLCRHG 213
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+A +V+ M G+ NV T+NVLI+++CK +A+ L M E G P+
Sbjct: 214 KV----KKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDV 269
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSV 402
T+ LI L + E +++ M + + D F + LC I + QA+ V
Sbjct: 270 VTYNTLITGLSSVLEMDEAMALLEEMMQGETRV-RPDLMTFNSVIHGLCKIGWMRQALQV 328
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M +G + ++LL+ ++V KA L DE +G++ Y +
Sbjct: 329 RAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSI 381
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDTANE----IFPDDKICDLLIKGWCVDGKLDEA 252
RD S V+ LC G A L++ ++E P+ L++ C D + +A
Sbjct: 54 RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQA 113
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L R M G V Y + + LC D +D+ E +L +M +G+ NV
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTL---IRGLCDAAD---VDTAVE-LLNEMCESGIEPNVVV 166
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ L+ CK R E K+F M G P+ + LI SL + +V + ++D M
Sbjct: 167 YSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT 226
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + +C + +A+ + + M G PD TY+ L+T + +D
Sbjct: 227 ERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMD 286
Query: 433 KANALFDEAVRNGVEVKP 450
+A AL +E ++ V+P
Sbjct: 287 EAMALLEEMMQGETRVRP 304
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR-----NVETFNVLISNLCK 322
V+YN +L + LCR+ LD+ A +L M + PR N ++ L+ LC
Sbjct: 56 AVSYNTVL---AALCRQGC---LDA-ALFLLRVMSHE--PRLASRPNAISYTTLMRALCA 106
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
RR+ A+ L M + G P+ T+ LI+ L AA V E+++ M +G
Sbjct: 107 DRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVV 166
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y L C R E VFE+M G PD Y L+ C H +V KA + D
Sbjct: 167 YSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT 226
Query: 443 RNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETL 475
G+E Y V + K+G RE L
Sbjct: 227 ERGLEPNVVTYNVLINSM-----CKEGSVREAL 254
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 41/257 (15%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + +I G C G + +A ++ M G VA+N ++ + ++ + K
Sbjct: 302 VRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAM 361
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L E M +G+ + T+++LI+ CK+R+ E A M G P +
Sbjct: 362 ELMDE-------MASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHY 414
Query: 349 LVLIKSLYQAARVGEGDEMIDRMK------SAGYAI---------GKKDYYEFLTRLCGI 393
+ L+K++ +G+ ++ + M +A Y+ KK EFL +
Sbjct: 415 IPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDE 474
Query: 394 ERIEQAMS-------------------VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
I A++ V ++M G PD +D L+ + A +K
Sbjct: 475 GLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKI 534
Query: 435 NALFDEAVRNGVEVKPK 451
L E V + PK
Sbjct: 535 LELTREMTAKDVALDPK 551
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 151/350 (43%), Gaps = 15/350 (4%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV 155
P LV ++ P+ A F W + + F+H T + + + + + H F
Sbjct: 68 VPDLVGKVIHRIPDPNTAWEVF-QWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQ 126
Query: 156 DN-KEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+ K V P ++ + ++ +AG + L F M +D G + S +V+ LC
Sbjct: 127 SHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM-KDSGIAVLR-SHNIVLRGLCSG 184
Query: 213 GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
G S A ++ KD + P+ ++I G C K+D+A L ++M V Y
Sbjct: 185 GKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYG 244
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++D + K R K+ + L EA G V T+N +I LCK R E+A+ L
Sbjct: 245 ALIDGLGKQRRVKEAYDLFEEARA-------KGCHPTVVTYNTMIDGLCKCGRIENALTL 297
Query: 333 FYRMG-EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+ M E P+ T+ LI L + R + E+ + M G + Y L LC
Sbjct: 298 YDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLC 357
Query: 392 GIERIEQAMSVFEKMKTDG-HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
++AM +F KM +P+ TY +L+ ++C +R+ A L E
Sbjct: 358 KSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKE 407
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 129/310 (41%), Gaps = 20/310 (6%)
Query: 144 RKDFKAIHDF--LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
RK KAI F +VD T + ID L + R + FE R G +
Sbjct: 219 RKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEE-ARAKGCHPTVVT 277
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+++ LC+ G A L D E + PD LI G + + ++A L EM
Sbjct: 278 YNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM 337
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR-NVETFNVLIS 318
G V YN +LD LC+ + +A ++ M V NV T+ VLI
Sbjct: 338 LDTGCSPDVVTYNTLLD---GLCKSG----CEDKAMEIFRKMGVGNVCDPNVITYTVLID 390
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
CK+ R DA+KL M P+ TF +I+ L + +R+ E E+ + +
Sbjct: 391 RFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT---- 446
Query: 379 GKKDYYEFLTRL---CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
K D F T L C I RI+ A + ++M G P TY L+T +C R A
Sbjct: 447 CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDAL 506
Query: 436 ALFDEAVRNG 445
++ E + G
Sbjct: 507 IMYHEMIEMG 516
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 21/298 (7%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLAS---CIDRLVRAGRPTQVLGFFERM 189
T D G+++ K +D + + T+ + ID L + GR L ++ M
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 190 ERDYGFKRDKDSLRLVVEKL-----CENGYASYAEKLVKDTANEIFPDDKICDLLIKGWC 244
R+ K D + ++ L E Y Y E L DT PD + L+ G C
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEML--DTGCS--PDVVTYNTLLDGLC 357
Query: 245 VDGKLDEAKRLAREMYRGGF-ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
G D+A + R+M G + + Y ++D K+ R D +L E ME
Sbjct: 358 KSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKE-------MEG 410
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+ + TF +I LCK R ++A +LF +G+ C P+ F ++ + R+ +
Sbjct: 411 RSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDD 469
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
++ DRM +G A Y +T C R A+ ++ +M G P+ +L+
Sbjct: 470 AKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAELV 527
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N PD+ + L+ G+ G + +A L EM G + ++N +L LC
Sbjct: 131 NVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVL---RGLCSGGK 186
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
S A +V DM P N+ ++ ++I LCK R+ + AI LF +M + +P+
Sbjct: 187 I----SMAWEVFKDMSGIFSP-NLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVV 241
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI L + RV E ++ + ++ G Y + LC RIE A+++++ M
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 407 KTDGH-NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ H PD TY L+ NR +KA L++E + G
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTG 341
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 20/277 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ +RAGR + L ++ ME++ R S +++ L EN A + E+
Sbjct: 332 LNGYLRAGRIEECLELWKVMEKEGC--RTVVSYNILIRGLFENAKVDEAISIW-----EL 384
Query: 230 FPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ C +L+ G C +G L++A + E G +L T AY+ + ++ LCR
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSM---INGLCR 441
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ RLD E VL M +G N N +I+ + + EDA++ F M GC P
Sbjct: 442 EG---RLD-EVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ LI L +A R E ++ M G+ Y + LC ++++ A++++
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ G PD + +++++ C+ +V+ A L+ E
Sbjct: 558 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 594
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 193/465 (41%), Gaps = 49/465 (10%)
Query: 15 QQPPHRFIS--PQSTYFSRFSPTHYL--NFLSKPFSSKPTSNPKTIDD---------PDQ 61
++ PH +S T F +S T Y+ + L + F K ++ I + P+
Sbjct: 20 EKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPED 79
Query: 62 VIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWL 121
V + ++ L I QR+H IF P S LN A++ N W
Sbjct: 80 VALTVIKAYAKNSMPDQALDIFQRMHEIFG-CQPGIRSYNSLLN-------ALIESNKWD 131
Query: 122 TQNANFSHTD--------ETLSFFTDYFGRRKDF---KAIHDFLVDNKEVLGPKTLASCI 170
+ F + + +T + R+K F K + +++ + + + I
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLI 191
Query: 171 DRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENG----YASYAEKLVKDT 225
+ L + G + L F+ M ER G D ++++ + G + E+L+K
Sbjct: 192 NSLAKNGYMSDALKLFDEMPER--GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ ++P+ +++I G C GK DE+ + M + Y+ + + LC
Sbjct: 250 S--VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL---IHGLCGSG 304
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ LD A +V +M NGV +V +N +++ + R E+ ++L+ M + GC
Sbjct: 305 N---LDG-ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TV 359
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
++ +LI+ L++ A+V E + + + Y + LC + +A+S+ E+
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+ + D+ Y ++ C R+D+ + D+ ++G + P
Sbjct: 420 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 8/259 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLA 256
D + ++V LC+NGY + A ++++ N D +I G C +G+LDE +
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+M + G + N +++ + + +D R +M G V T+N L
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF-------FGNMVSKGCFPTVVTYNTL 505
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ L K R +A L M G PN T+ +L+ L Q ++ + + G+
Sbjct: 506 INGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 565
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
K + + LC ++E A+ ++ +MK P+ T++ LM + ++A+
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625
Query: 437 LFDEAVRNGVEVKPKEYRV 455
++D ++ G + Y +
Sbjct: 626 IWDHILQYGPQPDIISYNI 644
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 19/262 (7%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY--ASYAEKLVKD 224
+S I+ L R GR +V G ++M + +G K + V+ NG+ AS E ++
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTK-HGCKPNPHVCNAVI-----NGFVRASKLEDALRF 486
Query: 225 TANEI----FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
N + FP + LI G + EA L +EM G++ + Y+ +++
Sbjct: 487 FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN---G 543
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+ K +LD +E G +V+ N++I LC + EDA++L+ M +
Sbjct: 544 LCQGK---KLDMALNLWCQALE-KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN T L++ Y+ ++ D + G Y L LC RI A+
Sbjct: 600 CVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAV 659
Query: 401 SVFEKMKTDGHNPDSETYDLLM 422
G P + T+++L+
Sbjct: 660 GFLNDAVDRGVLPTAITWNILV 681
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 139/317 (43%), Gaps = 35/317 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTA- 226
I+ L + G+ + + RM+++ +R +D + ++ LC +G A ++ K+ A
Sbjct: 262 INGLCKCGKFDESFEIWHRMKKN---ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD + + ++ G+ G+++E L + M + G V+YN ++ + + + +
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDE 377
Query: 287 PFRL-------DSEAEKVLLDMEYNGVPRN-------------------VETF--NVLIS 318
+ D A+ + + +G+ +N ++TF + +I+
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC+ R ++ + +M + GC PN +I +A+++ + M S G
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + L ER +A ++ ++M G P+ TY LLM C ++D A L+
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557
Query: 439 DEAVRNGVEVKPKEYRV 455
+A+ G + K + +
Sbjct: 558 CQALEKGFKPDVKMHNI 574
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKDTANE 228
ID + G +ER+ + + S +++ LC+ G + E + NE
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
D LI G C G LD A R+ +EM G V YN +L+ + R ++
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L KV ME G R V ++N+LI L + + ++AI ++ + E C + T+
Sbjct: 346 EL----WKV---MEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VL+ L + + + +++ ++ + Y + LC R+++ V ++M
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ + ++ + ++++ A F V G
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 131/326 (40%), Gaps = 49/326 (15%)
Query: 162 GPKTLAS--CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
PK+L+ I L P L F+ + R G+ ++++L + ++
Sbjct: 4 APKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVS 63
Query: 220 KLVK--DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILD 276
++V+ T P+D + +IK + + D+A + + M+ G + G +YN +L+
Sbjct: 64 RIVELIRTQKCKCPED-VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN 122
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE--------- 327
+ + K D EAE L E G+ N++T+N+LI C+ ++ +
Sbjct: 123 ALIE-SNKWD------EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 175
Query: 328 --------------------------DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
DA+KLF M E G P+ + +LI ++ +
Sbjct: 176 WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 235
Query: 362 GEGDEMIDR-MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E+ +R +K Y + LC + +++ ++ +MK + D TY
Sbjct: 236 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
L+ C +D A ++ E NGV
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGV 321
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ L +A R ++ + M G+K + + L++ LC+ A L
Sbjct: 501 TYNTLINGLSKAERFSEAYALVKEMLHK-GWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ F PD K+ +++I G C GK+++A +L EM + V +N +++ K+
Sbjct: 560 ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKV-- 617
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R A K+ + G ++ ++N+ + LC R DA+ + G P
Sbjct: 618 -----RDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 672
Query: 344 NETTFLVLIKSL 355
T+ +L++++
Sbjct: 673 TAITWNILVRAV 684
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 145/347 (41%), Gaps = 38/347 (10%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ K+ HD ++ L + + I+ L + G L +++ K +
Sbjct: 152 GKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKL-VKINVVM 210
Query: 202 LRLVVEKLCE-----NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+++ LC+ + Y Y++ + K +I PD LI G+C+ G+L+EA L
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAK----KISPDVVTFSALIYGFCIVGQLEEAFGLF 266
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKK-------------------------DPFRLD 291
REM +N ++D + K K D + L
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326
Query: 292 SEAEK---VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++ K VL + G N ++ +I+ CKI+ ++A+ LF M G P++ T+
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L ++ R+ E++D M G Y + LC ++QA+++ +K+K
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD 446
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G PD T+++L+ C R+ A +F + + G V Y +
Sbjct: 447 QGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNI 493
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G+C +DEA L +M G V YN ++D + K R + L E
Sbjct: 354 MINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDE----- 408
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M NG P N+ T+N LI LCK + AI L ++ + G P+ TF +LI L +
Sbjct: 409 --MHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKV 466
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ ++ + S GY++ Y + LC ++A ++ KM +G PD+ TY
Sbjct: 467 GRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTY 526
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ L+ + +KA L E + V
Sbjct: 527 ETLIQALFHKDENEKAEKLLREMIARDV 554
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G++ D + +++ LC NG A F D+ LI G C G+ A
Sbjct: 133 GYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTA 192
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ R++ ++ V YN I+D LC+ K L +A ++ M + +V T
Sbjct: 193 LQMLRKIDGKLVKINVVMYNTIID---SLCKHK----LVIDAYELYSQMIAKKISPDVVT 245
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
F+ LI C + + E+A LF M +P+ TF +L+ +L + + M+ M
Sbjct: 246 FSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMM 305
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + C + ++ +A V + G P++ +Y ++ +C VD
Sbjct: 306 KEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVD 365
Query: 433 KANALFDEAVRNGV 446
+A +LF++ G+
Sbjct: 366 EALSLFNDMQFKGI 379
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 47/267 (17%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFE 187
DE LS F D FK I P T S ID L ++GR + +
Sbjct: 364 VDEALSLFND-----MQFKGI-----------APDKVTYNSLIDGLCKSGRISYAWELVD 407
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD 246
M D G + + +++ LC+N + A LVK ++ I PD ++LI G C
Sbjct: 408 EM-HDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKV 466
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+L A+ + +++ G+ + YN + V+ LC++ L EAE +L M+ NG+
Sbjct: 467 GRLKNAQDVFQDLLSKGYSVNAWTYNIM---VNGLCKEG----LFDEAEALLSKMDDNGI 519
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+ T+ LI L +E A KL M + + + A EG E
Sbjct: 520 IPDAVTYETLIQALFHKDENEKAEKLLREM--------------IARDVVYAL---EGLE 562
Query: 367 MIDRMKSAG---YAIGKKDYYEFLTRL 390
M+ ++S GKK YY T L
Sbjct: 563 MVLHLESEAKDQEKFGKKGYYAITTNL 589
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 64/142 (45%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
+E++G+ ++ TFN+LI+ C + A + ++ + G P+ TF LIK L +
Sbjct: 94 LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E D + + G+ + + Y + LC I A+ + K+ + Y+
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213
Query: 421 LMTKWCAHNRVDKANALFDEAV 442
++ C H V A L+ + +
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMI 235
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 34/256 (13%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL------------- 275
I PD ++LI +C +++ A + ++ + G+E T+ +N ++
Sbjct: 99 ITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEAL 158
Query: 276 ---DCVSKLCRKKDPFRLDS------------EAEKVLLDMEYNGVPRNVETFNVLISNL 320
D V L D F + A ++L ++ V NV +N +I +L
Sbjct: 159 HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSL 218
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + DA +L+ +M P+ TF LI Y VG+ +E +
Sbjct: 219 CKHKLVIDAYELYSQMIAKKISPDVVTFSALI---YGFCIVGQLEEAFGLFREMVLKNIN 275
Query: 381 KDYYEF---LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
DYY F + LC ++ A ++ M +G P+ TY LM +C N+V+KA +
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHV 335
Query: 438 FDEAVRNGVEVKPKEY 453
+ + G Y
Sbjct: 336 LNTISQMGAAPNAHSY 351
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 145/359 (40%), Gaps = 49/359 (13%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T S + + + ++F LV+ +E L T I L R+G + GF + M
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305
Query: 190 ERDYGFKRDKDSLRLVVEKLCEN-----------------------------------GY 214
E DYG D + ++ LC++ G
Sbjct: 306 E-DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 364
Query: 215 ASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
A A K++K+ A + P+ D L++G C G++D A L ++M R T+ YN
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
I++ + KKD FRL SE ME G+ NV T++++I LC+ E A L
Sbjct: 425 IIEGHFRHHSKKDAFRLLSE-------MENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
M G PN + LI + V E+ D+M Y + L +
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
R+E++ F +M+ G P+ TY L+ + + ++ A L + G +KP +
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG--LKPND 594
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI+ +C + D AK++ EM G L TV YN + ++ LCR
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVL---IAGLCRSGAV- 295
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA DME G+ + T+ LI+ LCK RRS +A L M PN +
Sbjct: 296 ---EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 352
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + E +MI M +AG K Y + LC + ++++A + ++M
Sbjct: 353 ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 412
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D H PD+ TY+L++ H+ A L E G+ Y +
Sbjct: 413 DSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSI 459
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 10/264 (3%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKL 249
R+ G + + +++ LC +G A KD + + PD LI G C +
Sbjct: 271 RERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS 330
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
+EAK L EM + V Y ++D R+ + EA K++ +M GV N
Sbjct: 331 NEAKALLDEMSCAELKPNVVVYANLID---GFMREGNA----DEAFKMIKEMVAAGVQPN 383
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
T++ L+ LCK+ + + A L +M P+ T+ ++I+ ++ + ++
Sbjct: 384 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 443
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M++AG + Y + LC E+A + E+M T G P++ Y L++ +C
Sbjct: 444 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 503
Query: 430 RVDKANALFDEAVRNGVEVKPKEY 453
V A +FD+ + V V P Y
Sbjct: 504 NVSLACEIFDKMTK--VNVLPDLY 525
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 21/312 (6%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK---D 224
S I L + GR + +F +M+ + G ++ + ++ +NG AE+LV+ D
Sbjct: 529 SLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 587
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
T + P+D I L++ + +++ + M G L Y ++ +S
Sbjct: 588 TG--LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 645
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ FR VL +E NG +V ++ LIS LCK E A + M + G PN
Sbjct: 646 EAAFR-------VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 698
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ LI L ++ + + + + + G Y + C + I A ++
Sbjct: 699 IVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYN 758
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA-VRNGVEVKPKEYRVDPRYLKKP 463
+M G PD+ Y +L T + +++A L +E +R + VD
Sbjct: 759 EMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGF----- 813
Query: 464 IAVKKGKKRETL 475
K+GK +ETL
Sbjct: 814 --CKRGKMQETL 823
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 14/262 (5%)
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ D+L+ + G++ +A + M G N +L KD R D+ A
Sbjct: 176 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALL---------KDLLRADAMA 226
Query: 295 E--KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
KV M G+ +V T++ LI CK+R + A K+ M E GC N T+ VLI
Sbjct: 227 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 286
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L ++ V E M+ G Y + LC R +A ++ ++M
Sbjct: 287 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 346
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKR 472
P+ Y L+ + D+A + E V GV+ Y R L K + + +
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK---MGQMDRA 403
Query: 473 ETLPEKMARKRRRLKQIRLSFV 494
L ++M R R I + +
Sbjct: 404 SLLLKQMVRDSHRPDTITYNLI 425
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 80/208 (38%), Gaps = 10/208 (4%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
N V +S I L + + G + M + G + +++ LC++G S
Sbjct: 658 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK-GVDPNIVCYNALIDGLCKSGDIS 716
Query: 217 YAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
YA + A + P+ LI G C G + A L EM G Y+ +
Sbjct: 717 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 776
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
S D E L++ + ++ +FN L+ CK + ++ +KL +
Sbjct: 777 TGCSSAG--------DLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHV 828
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGE 363
+ G PN T +I L +A ++ E
Sbjct: 829 IMGRGLVPNALTIENIISGLSEAGKLSE 856
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%)
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
R+ +VL+ K R +DA ++ M + G P+ L+K L +A + ++
Sbjct: 172 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV 231
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M AG + Y + C + + A V +M+ G ++ TY++L+ C
Sbjct: 232 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 291
Query: 428 HNRVDKA 434
V++A
Sbjct: 292 SGAVEEA 298
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P ++ ++ NLC+ + +A+ L M + G P+E L+L+ +L+ + + E +
Sbjct: 923 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNT 982
Query: 367 MIDRM 371
++D M
Sbjct: 983 VLDNM 987
>gi|90399282|emb|CAH68243.1| H0306F03.10 [Oryza sativa Indica Group]
gi|125549952|gb|EAY95774.1| hypothetical protein OsI_17648 [Oryza sativa Indica Group]
Length = 442
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 150/361 (41%), Gaps = 29/361 (8%)
Query: 80 LPISQRLHLIFSHVTPTP------SLVQSTLNFSPEAGRAILGFNHWLTQ--NANFSHTD 131
LP S LH V TP + V TL+ R L F HW AN T
Sbjct: 11 LPFST-LHTPAGDVAATPPSPLDATAVLETLSLYANDWRRALEFFHWSASPDGANVPPTP 69
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKE-------VLGPKTLASCIDRLVRAGRPTQVLG 184
T++ D G+ +F LV + + L P L S ++RL A +
Sbjct: 70 ATVARAVDVLGKHFEFPLATSLLVSHHDPGRADPSFLRP-ALRSLLNRLAAANLIDDAIR 128
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD-DKICDLLIKGW 243
F+ G RD+ S +V+ LC++ A L FP K +LL++GW
Sbjct: 129 AFDSTAGSIGL-RDEASFHALVDALCDHRRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGW 187
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
++L +M G +Y+ +D ++K + F KV +M+
Sbjct: 188 AKTRAWARLRQLWFDMDSRGVAKDLHSYSIYMDALAKSGKPWKAF-------KVFKEMKQ 240
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ +V +N I ++ + + AI+L+ +M + GC PN +TF ++K L + R E
Sbjct: 241 KGMAIDVVAYNTAIHSVGLAQGVDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKE 300
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
G + +M G Y+ F L R ++ + +FEKM G P +TY +L+
Sbjct: 301 GYAFVQQMHKFGIEPNVLTYHCFFQYL---SRPQEVLGLFEKMLERGCWPRMDTYVMLIK 357
Query: 424 K 424
+
Sbjct: 358 R 358
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 17/296 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L + G + L F E + F+ DK +V C G A+++V
Sbjct: 375 TYNTFVHMLSKHGHGDEALEFLREAE-ERRFRVDKVGYSAIVHSFCREGRMDKAKEIV-- 431
Query: 225 TANEIFPDDKICDLL-----IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
NE+F I D++ I G C + K+D+AK++ R+MY+ G + TV+Y +L+
Sbjct: 432 --NEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN--- 486
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC+ + EA +++ E + N T++VL+ + +S +A L M +
Sbjct: 487 GLCKNGNSL----EAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 542
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P +LI+SL Q +V E +++ + G A+ ++ + C + +E A
Sbjct: 543 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 602
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+S+ + M +PD TY ++ R+++A L + +R G+ P YR
Sbjct: 603 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRT 658
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 160/371 (43%), Gaps = 36/371 (9%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRR-----KDFKAI-HDFLVDN-----KEVLGPK- 164
F H L+++ H DE L F + RR + AI H F + KE++
Sbjct: 379 FVHMLSKHG---HGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 435
Query: 165 ---------TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
T S I+ L + + Q +M + +G K + S ++ LC+NG +
Sbjct: 436 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK-HGCKPNTVSYTALLNGLCKNGNS 494
Query: 216 SYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
A +++ + + + P+ +L+ G+ +GK EA L REM + GF V N +
Sbjct: 495 LEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 554
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ LC+++ ++D EA++ + NG NV F +I C+ E A+ L
Sbjct: 555 ---IQSLCQEE---KVD-EAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 607
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M HP+ T+ +I +L + R+ E ++ +M G Y + + C +
Sbjct: 608 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMG 667
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE-Y 453
R+E + + EKM + Y+ ++ K C+ +++A L + +R ++ +
Sbjct: 668 RVEDLLKLLEKMLS--RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 725
Query: 454 RVDPRYLKKPI 464
+ YL K I
Sbjct: 726 MLIESYLSKGI 736
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 14/229 (6%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD IC+ I + +LD+A R M E + YNC++ L R +D
Sbjct: 263 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAM 322
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM-GEWGCHPNETT 347
L +E M + G + ++ ++ LCK +R ++ L +M + P++ T
Sbjct: 323 ELIAE-------MPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVT 375
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAG---YAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ + L ++ G GDE ++ ++ A + + K Y + C R+++A +
Sbjct: 376 YNTFVHML---SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 432
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+M + G PD TY ++ C +VD+A + + ++G + Y
Sbjct: 433 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 481
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A +VL M+ G+ ++ N I L R + A++ RM PN T+ LIK
Sbjct: 251 AMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIK 310
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-N 412
R+ + E+I M G + K YY + LC +RI++ + EKM D +
Sbjct: 311 GYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLL 370
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
PD TY+ + H D+A EA + + +RVD
Sbjct: 371 PDQVTYNTFVHMLSKHGHGDEALEFLREA-------EERRFRVD 407
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 19/288 (6%)
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDS---------LRLVVEKLCENGYASYAEKLV 222
RL R + F +R Y + D + L L V+ LC+ G+ A +LV
Sbjct: 111 RLGRTDSAARAFRFLQRHPGCYAVESDDGAPAAEAAVSPLILTVDALCKEGHPRAAARLV 170
Query: 223 KDTANE---IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
E PD ++ ++L+ GW +LD+ ++L M G V Y +D
Sbjct: 171 AQVRREDGGWAPDVRVYNILLNGWSRARRLDKVEKLWAAMRDEGVRPTVVTYGTFIDAY- 229
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
C + P +A +L M G+ N+ T N ++ L + R DA K+ + +
Sbjct: 230 --CVMRRP----DQAMTLLDQMREEGIQANLLTCNPIVYALAQAGRFGDAHKVLEKFPLY 283
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G PN +TF L+ + + ++ M G + + Y F IE
Sbjct: 284 GVSPNISTFNSLVFGYCKHGDLAGASGVLKAMLGRGISPTARTYNYFFMVFSRNRSIELG 343
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M+++ KM ++G+ PD TY LL+ C NR++ + E NG E
Sbjct: 344 MNLYVKMVSNGYAPDQFTYHLLIKMLCEANRLELTLQMLQEMRNNGFE 391
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 94/259 (36%), Gaps = 44/259 (16%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T + ID RP Q + ++M R+ G + + + +V L + G A K++ K
Sbjct: 221 TYGTFIDAYCVMRRPDQAMTLLDQM-REEGIQANLLTCNPIVYALAQAGRFGDAHKVLEK 279
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ + L+ G+C G L A + + M G YN S+
Sbjct: 280 FPLYGVSPNISTFNSLVFGYCKHGDLAGASGVLKAMLGRGISPTARTYNYFFMVFSR--- 336
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R + + M NG + T+++LI LC+ R E +++ M G P
Sbjct: 337 ----NRSIELGMNLYVKMVSNGYAPDQFTYHLLIKMLCEANRLELTLQMLQEMRNNGFEP 392
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
++ T +LI LC E+A + F
Sbjct: 393 DQATSTMLIHL-----------------------------------LCRRHHFEEAFAEF 417
Query: 404 EKMKTDGHNPDSETYDLLM 422
E+M G P TY +LM
Sbjct: 418 EQMFERGIVPQYITYRMLM 436
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 20/277 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ +RAGR + L ++ ME++ R S +++ L EN A + E+
Sbjct: 307 LNGYLRAGRIEECLELWKVMEKEGC--RTVVSYNILIRGLFENAKVDEAISIW-----EL 359
Query: 230 FPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ C +L+ G C +G L++A + E G +L T AY+ + ++ LCR
Sbjct: 360 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSM---INGLCR 416
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ RLD E VL M +G N N +I+ + + EDA++ F M GC P
Sbjct: 417 EG---RLD-EVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 472
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ LI L +A R E ++ M G+ Y + LC ++++ A++++
Sbjct: 473 TVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLW 532
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ G PD + +++++ C+ +V+ A L+ E
Sbjct: 533 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 569
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 139/325 (42%), Gaps = 16/325 (4%)
Query: 158 KEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY 217
K + PK +A + P Q L F+RM +G + S ++ L E+
Sbjct: 51 KRLFDPKLVAHA---YAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDE 107
Query: 218 AEK--LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
AE L +T + P+ + ++LIK C + D+AK L M+ GF +Y ++
Sbjct: 108 AESFFLYFETMG-LSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLI 166
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ ++K D +L E M GV +V +N+LI K +A +++ R
Sbjct: 167 NSLAKNGYMSDALKLFDE-------MPERGVTPDVACYNILIDGFFKKGDILNASEIWER 219
Query: 336 MGEW-GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+ + +PN ++ V+I L + + E E+ RMK Y + LCG
Sbjct: 220 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 279
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
++ A V+++M +G +PD Y+ ++ + R+++ L+ + G Y
Sbjct: 280 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYN 338
Query: 455 VDPRYLKKPIAVKKG-KKRETLPEK 478
+ R L + V + E LPEK
Sbjct: 339 ILIRGLFENAKVDEAISIWELLPEK 363
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 8/259 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLA 256
D + ++V LC+NGY + A ++++ N D +I G C +G+LDE +
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+M + G + N +++ + + +D R +M G V T+N L
Sbjct: 428 DQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFG-------NMVSKGCFPTVVTYNTL 480
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ L K R +A L M + G PN T+ +L+ L Q ++ + + G+
Sbjct: 481 INGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 540
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
K + + LC ++E A+ ++ +MK P+ T++ LM + ++A+
Sbjct: 541 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASK 600
Query: 437 LFDEAVRNGVEVKPKEYRV 455
++D ++ G++ Y +
Sbjct: 601 IWDHILQYGLQPDIISYNI 619
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 164/387 (42%), Gaps = 36/387 (9%)
Query: 80 LPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTD-------- 131
L I QR+H IF P S LN A++ N W + F + +
Sbjct: 73 LDIFQRMHEIFG-CQPGIRSYNSLLN-------ALIESNKWDEAESFFLYFETMGLSPNL 124
Query: 132 ETLSFFTDYFGRRKDF---KAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFER 188
+T + R+K F K + +++ + + I+ L + G + L F+
Sbjct: 125 QTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 184
Query: 189 M-ERDYGFKRDKDSLRLVVEKLCENG----YASYAEKLVKDTANEIFPDDKICDLLIKGW 243
M ER G D ++++ + G + E+L+K + ++P+ +++I G
Sbjct: 185 MPER--GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS--VYPNIPSYNVMINGL 240
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C GK DE+ + M + Y+ + + LC + LD A +V +M
Sbjct: 241 CKCGKFDESFEIWHRMKKNERGQDLYTYSTL---IHGLCGSGN---LDG-ATRVYKEMAE 293
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
NGV +V +N +++ + R E+ ++L+ M + GC ++ +LI+ L++ A+V E
Sbjct: 294 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDE 352
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ + + Y + LC + +A+S+ E+ + + D+ Y ++
Sbjct: 353 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 412
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKP 450
C R+D+ + D+ ++G + P
Sbjct: 413 GLCREGRLDEVAGVLDQMTKHGCKPNP 439
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 19/267 (7%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY--ASYAEKLVKD 224
+S I+ L R GR +V G ++M + +G K + V+ NG+ AS E ++
Sbjct: 408 SSMINGLCREGRLDEVAGVLDQMTK-HGCKPNPYVCNAVI-----NGFVRASKLEDALRF 461
Query: 225 TANEI----FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
N + FP + LI G + EA L +EM + G++ + Y+ +++
Sbjct: 462 FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMN---G 518
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+ K +LD +E G +V+ N++I LC + EDA++L+ M +
Sbjct: 519 LCQGK---KLDMALNLWCQALE-KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRN 574
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN T L++ Y+ ++ D + G Y L LC RI A+
Sbjct: 575 CVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAV 634
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCA 427
G P + T+++L+ + A
Sbjct: 635 GFLNDAVDRGVLPTAITWNILVQGYLA 661
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 139/317 (43%), Gaps = 35/317 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTA- 226
I+ L + G+ + + RM+++ +R +D + ++ LC +G A ++ K+ A
Sbjct: 237 INGLCKCGKFDESFEIWHRMKKN---ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 293
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD + + ++ G+ G+++E L + M + G V+YN ++ + + + +
Sbjct: 294 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDE 352
Query: 287 PFRL-------DSEAEKVLLDMEYNGVPRN-------------------VETF--NVLIS 318
+ D A+ + + +G+ +N ++TF + +I+
Sbjct: 353 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 412
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC+ R ++ + +M + GC PN +I +A+++ + M S G
Sbjct: 413 GLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 472
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + L ER +A ++ ++M G P+ TY LLM C ++D A L+
Sbjct: 473 TVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLW 532
Query: 439 DEAVRNGVEVKPKEYRV 455
+A+ G + K + +
Sbjct: 533 CQALEKGFKPDVKMHNI 549
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKDTANE 228
ID + G +ER+ + + S +++ LC+ G + E + NE
Sbjct: 201 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 260
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
D LI G C G LD A R+ +EM G V YN +L+ + R ++
Sbjct: 261 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 320
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L KV ME G R V ++N+LI L + + ++AI ++ + E C + T+
Sbjct: 321 EL----WKV---MEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 372
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VL+ L + + + +++ ++ + Y + LC R+++ V ++M
Sbjct: 373 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 432
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ + ++ + ++++ A F V G
Sbjct: 433 HGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKG 469
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 9/275 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+S I+ L R G+ + + F+ M G K + + ++ C G A +
Sbjct: 118 SSLINGLCRVGKLREAVNLFDEMVSQ-GIKANVITYNSLIHASCRFGLWKEATRTFSQMV 176
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
E I PD LI GK+ EA ++ M + G V YN +L+ LC
Sbjct: 177 GEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLN---GLCLHH 233
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
++D A ++ M G+ +V ++N LI+ C ++E+A+ LF +M P+
Sbjct: 234 ---QMD-HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSI 289
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
TT+ +L+K+LYQ R+ E+ + M+ G + Y L LC IE+A+ VF
Sbjct: 290 TTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRS 349
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+K+ + P Y +L+ R + A +FDE
Sbjct: 350 LKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDE 384
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 28/251 (11%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ L+KG C +GK+ +A L +M R GF+ + Y +++ + K + + L
Sbjct: 7 PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66
Query: 291 --------------------DS--------EAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
DS + K+ +M G+ NV ++ LI+ LC+
Sbjct: 67 HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ + +A+ LF M G N T+ LI + + E +M G
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + L ++++A +FE M G P+ TY+ L+ C H+++D A LF+ V
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246
Query: 443 RNGVEVKPKEY 453
G+++ Y
Sbjct: 247 ERGIKIDVISY 257
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 9/271 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + G+ + FE M + G + + ++ LC + +A +L +
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQ-GEAPNIVTYNSLLNGLCLHHQMDHAVRLFEV 244
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
D I + LI G+C GK +EA L R+M Y +L + + R
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A+++ +M+ G +++T+ VL+ LCK E+AI +F + P
Sbjct: 305 IRT-------AKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKP 357
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + +LI ++QA R E+ D + + G Y + LC ++ +A +F
Sbjct: 358 SIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLF 417
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+M+ G D +++ ++ + N+V KA
Sbjct: 418 VQMEESGCEQDEISFNFIIRGFLQENQVQKA 448
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I+ +G+ + + F +M+ + + ++++ L +NG TA
Sbjct: 259 TLINGYCTSGKTEEAMTLFRKMQYEE-LTPSITTYTILLKALYQNGRIR--------TAK 309
Query: 228 EIFPDDKICD---------LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E+F + +IC +L+ G C +G ++EA + R + ++ Y+ ++ +
Sbjct: 310 ELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGM 369
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
+ R + + E V G+ N+ T+N++I+ LCK + +A +LF +M E
Sbjct: 370 FQARRWESAMEIFDEIPTV-------GLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEE 422
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
GC +E +F +I+ Q +V + E + RM+ ++
Sbjct: 423 SGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFS 461
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLARE 258
D+ ++++ LC+NG A + + + + P +I +LI G + + A + E
Sbjct: 325 DTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDE 384
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
+ G V YN + ++ LC++ EAE++ + ME +G ++ +FN +I
Sbjct: 385 IPTVGLVPNIVTYNIM---INGLCKEGKLL----EAERLFVQMEESGCEQDEISFNFIIR 437
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ + + A++ RM E PN++ L+L+ +LY A
Sbjct: 438 GFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLV-NLYAA 476
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G N+ T + L+ +C + DA++LF +M G + + LI +L + +
Sbjct: 3 SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
E+ RM S + Y + LC + + +F +M G P+ Y L+
Sbjct: 63 AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
C ++ +A LFDE V G++ Y
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITY 152
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 147/315 (46%), Gaps = 13/315 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ + +V + T + ++ + + G L +ME + K D
Sbjct: 24 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVI 82
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++++LC++G+ S A+ L + + I P+ + +I G+C G+ +A+RL R+M
Sbjct: 83 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 142
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ +N + +S ++ F EAEK+ +M + + + T+N +I
Sbjct: 143 EREINPDVLTFNAL---ISASVKEGKLF----EAEKLCDEMLHRCIFPDTVTYNSMIYGF 195
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R +DA +F M P+ TF +I +A RV EG +++ + G
Sbjct: 196 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 251
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C ++ + A +F++M + G PD+ T ++L+ +C + ++++A LF+
Sbjct: 252 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 311
Query: 441 AVRNGVEVKPKEYRV 455
+ +++ Y +
Sbjct: 312 IQMSKIDLDTVAYNI 326
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 9/214 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID RA R + + + R G + + ++ CE + A+ L ++
Sbjct: 218 TFNTIIDVYCRAKRVDEGMQLLREISR-RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 276
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + PD C++L+ G+C + KL+EA L + +L TVAYN I + +C+
Sbjct: 277 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII---IHGMCK 333
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++D EA + + +GV +V+T+NV+IS C DA LF++M + G P
Sbjct: 334 GS---KVD-EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 389
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ +T+ LI+ +A + + E+I M+S G++
Sbjct: 390 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 423
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 34/331 (10%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ IDRL + G + F M + G + + +++ C G S A++L++D
Sbjct: 84 SAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 142
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL---------- 275
EI PD + LI +GKL EA++L EM TV YN ++
Sbjct: 143 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 202
Query: 276 ------------------DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
+ CR K R+D E ++L ++ G+ N T+N LI
Sbjct: 203 DAKHMFDLMASPDVVTFNTIIDVYCRAK---RVD-EGMQLLREISRRGLVANTTTYNTLI 258
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C++ A LF M G P+ T +L+ + ++ E E+ + ++ +
Sbjct: 259 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 318
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y + +C ++++A +F + G PD +TY+++++ +C + + AN L
Sbjct: 319 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 378
Query: 438 FDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
F + NG E Y R K + K
Sbjct: 379 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 409
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 7/215 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + +I +C ++DE +L RE+ R G T YN + + C +
Sbjct: 214 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL---IHGFCEVDNL--- 267
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ A+ + +M +GV + T N+L+ C+ + E+A++LF + + + +
Sbjct: 268 -NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 326
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I + + ++V E ++ + G + Y ++ CG I A +F KMK +G
Sbjct: 327 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 386
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
H PD+ TY+ L+ +DK+ L E NG
Sbjct: 387 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 421
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 32/244 (13%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-------- 290
LI G C++G++ EA L +M G + V Y I++ + K+ K L
Sbjct: 16 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 75
Query: 291 --------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
S+A+ + +M G+ NV T+N +I C R DA
Sbjct: 76 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 135
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+L M E +P+ TF LI + + ++ E +++ D M Y +
Sbjct: 136 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 195
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C R + A +F+ M + PD T++ ++ +C RVD+ L E R G+
Sbjct: 196 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 251
Query: 451 KEYR 454
Y
Sbjct: 252 TTYN 255
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E G P TF LI L RV E ++++M G I Y + +C +
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ A+++ KM+ PD Y ++ + C A LF E + G+
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 111
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 7/180 (3%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ V TFN LI+ LC R +A L +M G H + T+ ++ + +
Sbjct: 5 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ +M+ Y + RLC A +F +M G P+ TY+ ++
Sbjct: 65 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK--KRETLPEKMARK 482
+C+ R A L + + E+ P + +VK+GK + E L ++M +
Sbjct: 125 FCSFGRWSDAQRLLRDMIER--EINPDVLTFNALI---SASVKEGKLFEAEKLCDEMLHR 179
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 139/317 (43%), Gaps = 9/317 (2%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLAS---CIDRLVRAGRPTQVLGFFERM 189
T D G+++ K +D + + T+ + ID L + GR L ++ M
Sbjct: 32 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 91
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
+GF+ + +++ LC + KL+++ A P+ + L+ G+
Sbjct: 92 AIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGR 151
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
EA L +M G + + I+ + K + FR+ E + M +G+
Sbjct: 152 SKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDE-----MFMIESGLSP 206
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V TFN ++ LCK +R DA +F R E GC PN T+ LI L + A++ E +++
Sbjct: 207 DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 266
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M G Y + L + R+E A+ V +M+ G PD+ TY+ L+ +
Sbjct: 267 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 326
Query: 429 NRVDKANALFDEAVRNG 445
R+ +A L E + G
Sbjct: 327 QRLREAVGLLREMLEAG 343
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 131/285 (45%), Gaps = 11/285 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L+ GR + E+M + G + + L+++ LC+ G A ++V +
Sbjct: 138 TYNTLVNALLGQGRSKEAFSLLEQMAAN-GCPPELITFGLIIKGLCKEGEIEAAFRVVDE 196
Query: 225 ---TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ + PD + ++ G C + ++ +A + + G V Y+ ++D +SK+
Sbjct: 197 MFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 256
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+ EA ++L M G N T++ ++ L K+ R EDA+ + +M + GC
Sbjct: 257 AKM-------DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGC 309
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ T+ LI ++ R+ E ++ M AG+ Y LC R ++A+
Sbjct: 310 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVE 369
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ + M G P++ TY ++ C RV +A F++ R+ V
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 414
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 10/284 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L + + + L +M + G + + + VV+ L + G A +++
Sbjct: 245 TYSTLIDGLSKMAKMDEALQLLAKMV-ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 303
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + LI G+ +L EA L REM GF V Y + LCR
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL---CHGLCR 360
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG-EWGCH 342
R D EA ++L M G N T++ ++ LCK R +A+ F +M +
Sbjct: 361 SG---RFD-EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ + LI L +A ++ E E ++RM AG + + LC RI+ + +
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 476
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
F M G PD TY L+ + C +RVD+A LF + +G+
Sbjct: 477 FRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGL 520
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 8/277 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ +D L++ GR + +M RD G D + +++ + A L+++
Sbjct: 280 TYSTVVDGLLKVGRMEDAVVVLRQM-RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 338
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
F P L G C G+ DEA + M G + Y+ I+D + K R
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EK+ D V +V ++ LI LCK + ++A + RM G P
Sbjct: 399 VTEAL---GYFEKMARD---EVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIP 452
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF +LI L A R+ G E+ M G Y + RLC R+++A +F
Sbjct: 453 DVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLF 512
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
++M++DG +PD T ++ NR + A + DE
Sbjct: 513 QQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C K+D+A L ++M V Y ++D + K R K+ + L EA
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARA-- 58
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG-EWGCHPNETTFLVLIKSLYQ 357
G V T+N +I LCK R E+A+ L+ M +G P T+ LI L +
Sbjct: 59 -----KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCR 113
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
V +G ++++ M G A Y + L G R ++A S+ E+M +G P+ T
Sbjct: 114 DHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELIT 173
Query: 418 YDLLMTKWCAHNRVDKANALFDE 440
+ L++ C ++ A + DE
Sbjct: 174 FGLIIKGLCKEGEIEAAFRVVDE 196
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+I G C G+++ A L +M GF V Y+ ++D LCR + + K+
Sbjct: 71 MIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLID---GLCRDHEV----DKGCKL 123
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L +M G N T+N L++ L RS++A L +M GC P TF ++IK L +
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183
Query: 358 AARVGEGDEMIDRM--KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ ++D M +G + + L LC +RI A +VF++ G P+
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 243
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY L+ ++D+A L + V G Y
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 281
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + I D++ T +S +D L +AGR T+ LG+FE+M RD +
Sbjct: 362 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA 421
Query: 202 LRLVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+++ LC+ G A E++++ A I PD +LI G C G++D L R
Sbjct: 422 YSALIDGLCKAGKIDEAYEFLERMIR--AGRI-PDVVTFSILINGLCDAGRIDTGLELFR 478
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
M G V Y ++D +LCR R+D EA + M +G+ + T +I
Sbjct: 479 GMAERGCVPDMVTYATLVD---RLCRAS---RVD-EAFDLFQQMRSDGLSPDRSTRRTMI 531
Query: 318 SNLCKIRRSEDAIKL 332
L ++ R EDA ++
Sbjct: 532 HGLLEVNRDEDAKRI 546
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I LCK R+ + AI LF +M + +P+ T+ LI L + RV E ++ + ++ G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCAHNRVDKA 434
Y + LC RIE A+++++ M G P TY L+ C + VDK
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 435 NALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRE--TLPEKMA 480
L +E G Y L + +G+ +E +L E+MA
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNAL-----LGQGRSKEAFSLLEQMA 163
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T+ LI L K RR ++A LF GCHP T+ +I L + R+ +
Sbjct: 29 DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLY 88
Query: 369 DRMK-SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
D M G+ Y + LC +++ + E+M G P++ TY+ L+
Sbjct: 89 DDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLG 148
Query: 428 HNRVDKANALFDEAVRNG 445
R +A +L ++ NG
Sbjct: 149 QGRSKEAFSLLEQMAANG 166
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 11/278 (3%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDK 234
+G+P + +G F +M RD G + D + ++ LC+NG + A K+ + PD
Sbjct: 254 SGKPKEAIGIFRKMCRD-GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSS 312
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
I L+ G+ +G L + +L M R G + +N ++ +K + EA
Sbjct: 313 IYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAK-------HGMVDEA 365
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
M G+ N+ T+ ++ LC++ + +DA+ F R+ G PN F LI
Sbjct: 366 MLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHG 425
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + + +E+ M G + L LC + +A ++F+ M D
Sbjct: 426 LCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCD 485
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
TY L+ +C +VD+A L + V +G VKP E
Sbjct: 486 VITYTTLIDGYCLDGKVDEATKLLEGMVLDG--VKPNE 521
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 120/286 (41%), Gaps = 15/286 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + +D L R G+ + F+R+ + G + R ++ LC AE+L V+
Sbjct: 383 TYGTVMDALCRVGKVDDAMSQFDRLISE-GLTPNGVVFRTLIHGLCACDKWDKAEELAVE 441
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I P+ + L+ C +G + AK + M R + + Y ++D
Sbjct: 442 MIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLID------- 494
Query: 284 KKDPFRLDS---EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ LD EA K+L M +GV N T+N +I+ CK R EDA LF +M G
Sbjct: 495 ---GYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKG 551
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
+P + ++ L+Q R+ E+ M G + Y L LC + A+
Sbjct: 552 VNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDAL 611
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+F + + + T+++++ R D+A LF + G+
Sbjct: 612 RMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGL 657
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 126/276 (45%), Gaps = 9/276 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
++ L + G T+ F+ M R + D + +++ C +G A KL++ +
Sbjct: 458 LNHLCKEGMVTRAKNIFDLMVR-VDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDG 516
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P++ + +I G+C +G++++A L R+M G G V Y+ IL + +
Sbjct: 517 VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQT------- 569
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R + A+++ L M G+ + T+N+++ LC+ ++DA+++F+ + H TF
Sbjct: 570 RRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTF 629
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++I +L + R E ++ + + G Y+ + L +E+ +F ++
Sbjct: 630 NIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEK 689
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+G DS + L+ K V KA + N
Sbjct: 690 NGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDEN 725
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 6/216 (2%)
Query: 239 LIKGWCVDGKLDEAKRLA-REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+KG C D + +A +A R M G +YN +L + R + L +
Sbjct: 137 LLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHL---LHTM 193
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ D G P +V ++ +I+ L + + + A LF M + G PN T+ L+
Sbjct: 194 MADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCS 253
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ + E + +M G Y + LC R +A VF+ M GH PDS
Sbjct: 254 SGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSI 313
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
Y L+ + + + + L D VRNG + P Y
Sbjct: 314 YGTLLHGYATEGYLVQMHQLLDVMVRNGTQ--PDHY 347
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 119/284 (41%), Gaps = 26/284 (9%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ + R++R G Q + F ++ KR D++ + + ++ G
Sbjct: 117 AALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCT------------ 164
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY----RGGFELGTVAYNCILDCVSKLCR 283
P+ ++L+KG C + + +A L M RGG V+Y + ++ L R
Sbjct: 165 ---PNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV---INGLLR 218
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +LD +A + +M G+ N T+N L+ C + ++AI +F +M G P
Sbjct: 219 EG---QLD-KAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ L+ L + R E ++ D M G+ Y L + Q +
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ M +G PD +++L+ + H VD+A F + + G+
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLH 378
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 312 TFNVLISNLCKIRRSEDAIKL-FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
TF+ L+ LC +R+ DA+ + RM GC PN ++ +L+K L R + ++
Sbjct: 133 TFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHT 192
Query: 371 MKSAGYAIG-KKDYYEFLTRLCGIER---IEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
M + G D + T + G+ R +++A +F++M G +P+ TY+ L+ +C
Sbjct: 193 MMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYC 252
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+ + +A +F + R+GVE Y YL K
Sbjct: 253 SSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCK 288
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 148 KAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
K I D +V T + ID G+ + E M D G K ++ + ++
Sbjct: 471 KNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD-GVKPNEVTYNTIIN 529
Query: 208 KLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
C+NG A L + A++ + P I ++ G ++ AK L M + G +L
Sbjct: 530 GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKL 589
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
YN IL + + D R+ L+D TFN++I L K R
Sbjct: 590 PIGTYNIILQGLCQNNCTDDALRMFHNL--CLIDFHLQN-----RTFNIMIDALLKGGRH 642
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
++A LF + G PN T+ +++KSL +
Sbjct: 643 DEAKDLFASLLARGLVPNVVTYWLMMKSLIE 673
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 12/293 (4%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL--RLVVEKLCENGYASYAEKL 221
K+ S ++ +++ G + L F+ + G + L LV++ +C+ G A ++
Sbjct: 162 KSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQV 221
Query: 222 VKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+D T + PD L+ G C ++DEA L EM G V +N + ++
Sbjct: 222 FRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVL---ING 278
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+K D S A K++ +M G N T+N LI LC + E AI L RM
Sbjct: 279 LCKKGDL----SRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 334
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN T+ +I L + R +G ++ M+ GY + + Y ++ L + ++AM
Sbjct: 335 CVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAM 394
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+F++M G+ ++ Y ++ C + D A + E G P Y
Sbjct: 395 HLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKG--CTPNAY 445
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 153/390 (39%), Gaps = 30/390 (7%)
Query: 73 ENLEADPLPISQRLHLIFSH--VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHT 130
+ +E +PL +Q + + P P + P+ G LG
Sbjct: 44 KTIETEPLNHTQHCNTTDQENGIEPDPPISDKIFKSGPKMGSYRLG-------------- 89
Query: 131 DETLSFFTDYFGRRKDFKAIH---DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFE 187
D T + + DFK++ D + K V+ K +A P + + F+
Sbjct: 90 DSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFD 149
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGY----ASYAEKLVKDTANEIFPDDKICDLLIKGW 243
RM ++ KR S V+ + + G + ++ I P+ +L+IK
Sbjct: 150 RMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAM 209
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G +D+A ++ R+M E Y ++D LC+ R+D EA +L +M+
Sbjct: 210 CKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMD---GLCKAD---RID-EAVSLLDEMQI 262
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G + TFNVLI+ LCK A KL M GC PNE T+ LI L ++ +
Sbjct: 263 DGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEK 322
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++DRM S+ Y + L R V M+ G+ + Y L++
Sbjct: 323 AISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLIS 382
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +A LF E G E+ Y
Sbjct: 383 GLFKEGKSQEAMHLFKEMTVKGYELNTIVY 412
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 126/315 (40%), Gaps = 30/315 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L +A R + + + M+ D F + +++ LC+ G S A KLV +
Sbjct: 236 TYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV-TFNVLINGLCKKGDLSRAAKLVDN 294
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P++ + LI G C+ GKL++A L M V Y I++ + K R
Sbjct: 295 MFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGR 354
Query: 284 KKDPFRL----------------------------DSEAEKVLLDMEYNGVPRNVETFNV 315
D + EA + +M G N ++
Sbjct: 355 ALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSA 414
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I LC+ + +DA+++ M GC PN T L+K ++A E+ M
Sbjct: 415 VIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHN 474
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ + Y + LC ++++AM V+ +M G PD Y ++ V+ A
Sbjct: 475 FTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAM 534
Query: 436 ALFDEAVRNGVEVKP 450
L++E + G + +P
Sbjct: 535 QLYNEMLCQGPDSQP 549
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 12/252 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G +GK EA L +EM G+EL T+ Y+ ++D LCR P +A +VL
Sbjct: 380 LISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVID---GLCRDGKP----DDAVEVL 432
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G N T + L+ + S A++++ M + NE + VLI L +
Sbjct: 433 SEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKD 492
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG--HNPDSE 416
+V E + +M G Y + L +E AM ++ +M G PD
Sbjct: 493 GKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVV 552
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLP 476
TY++L+ C + + +A L + + G + + R L++ + + RE L
Sbjct: 553 TYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQ-DGREFLD 611
Query: 477 EKMAR--KRRRL 486
E + R KR+R+
Sbjct: 612 ELVVRLLKRQRV 623
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 145/350 (41%), Gaps = 27/350 (7%)
Query: 88 LIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETL--SFFTDYFGRRK 145
++ S P + +N + GRA+ G +E + + + F K
Sbjct: 330 MVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGK 389
Query: 146 DFKAIHDF--LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLR 203
+A+H F + L ++ ID L R G+P + M + G + +
Sbjct: 390 SQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT-NKGCTPNAYTCS 448
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ E G + A ++ KD A F +++C +LI G C DGK+ EA + +M
Sbjct: 449 SLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGK 508
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + VAY+ +++ +S +D +L +E +L + P +V T+N+L++ LCK
Sbjct: 509 GCKPDVVAYSSMINGLSIAGLVEDAMQLYNE----MLCQGPDSQP-DVVTYNILLNTLCK 563
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR-VGEGDEMIDRMKSAGYAIGKK 381
AI L M + GC P+ T + ++ L + +G E +D
Sbjct: 564 QSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLD------------ 611
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
E + RL +R+ A + E M P T+ ++ C +V
Sbjct: 612 ---ELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKV 658
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMG-EWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
+ F V+ K E A+ LF RM E+ C +F ++ + Q E +
Sbjct: 126 KCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYN 185
Query: 370 RMKSA-GYAIGKK--DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ A G +I + + +C + ++ A+ VF M PD TY LM C
Sbjct: 186 HVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLC 245
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+R+D+A +L DE +G P + V
Sbjct: 246 KADRIDEAVSLLDEMQIDGCFPSPVTFNV 274
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 124/292 (42%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID + GR + FFE M +D + D + ++ C+ G + ++
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + P+ L+ +C +G + +A + +M R G Y ++D K+
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D FRL +E +V GV NV T+ LI LC R ++A +LF +M G P
Sbjct: 418 LSDAFRLGNEMLQV-------GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ LI +A + E+++ +K G Y F+ LC +E+IE A V
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+MK G +S Y LM + + L DE +EV + V
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 582
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 127/319 (39%), Gaps = 45/319 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ + G+ L F+ M+ + G K + S +V+ C+ G A K D
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGN-GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD 392
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P++ LI C G L +A RL EM + G E V Y ++D + R
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN------------------------ 319
K EAE++ M+ GV N+ ++N LI
Sbjct: 453 MK-------EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 320 -----------LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
LC + + E A + M E G N + L+ + +++ EG ++
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCA 427
D MK + + + LC + + +A+ F ++ D G ++ + ++ C
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 428 HNRVDKANALFDEAVRNGV 446
N+V+ A LF++ V+ G+
Sbjct: 626 DNQVEAATTLFEQMVQKGL 644
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 33/217 (15%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD + I G C K++ AK + EM G + ++ Y ++D K +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 289 RLDSEAEKVLLDMEYN-------------------------------GVPRNVETFNVLI 317
L E ++ LD+E G+ N F +I
Sbjct: 563 HLLDEMKE--LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LCK + E A LF +M + G P+ T + L+ ++ V E + D+M G
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ Y + L ++++A S E+M +G +PD
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 57/140 (40%)
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N L+ K+ +++D + F M G P T+ ++I + + V + + MK
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + + R++ + FE+MK PD TY+ L+ +C ++
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 434 ANALFDEAVRNGVEVKPKEY 453
+ E NG++ Y
Sbjct: 351 GLEFYREMKGNGLKPNVVSY 370
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D ++G PT+ L + M ++ + + ++++ LC+N S A +N+
Sbjct: 549 MDAYFKSGNPTEGLHLLDEM-KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ + I +I G C D +++ A L +M + G AY ++D
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD---------GN 658
Query: 288 FRLDSEAEKVLL--DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
F+ + E + L M G+ ++ + L+ L + + A M G HP+E
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 346 TTFLVLIKSLYQAARVGEGDEM 367
+ ++K Y+ + E E+
Sbjct: 719 VLCISVLKKHYELGCIDEAVEL 740
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM---I 368
F+ L S L + E+AI+ F +M + P + L L++ A++G+ D++
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGL---LHRFAKLGKTDDVKRFF 250
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M AG Y + +C +E A +FE+MK G PD+ TY+ ++ +
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 310
Query: 429 NRVDKANALFDE 440
R+D F+E
Sbjct: 311 GRLDDTVCFFEE 322
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 14/309 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
GR D A+ + + ++ V P + I + R G+ + L ERM ++G D
Sbjct: 232 GRVHDVVALFERWIQDR-VYSPDVWSFNVVIKGVCRVGQVQKALELVERMN-EFGCSPDT 289
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ ++V+ LC S ++++ + P+ +I G+C GKL++A +
Sbjct: 290 VTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 349
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
+M G TV YN +++ K+ L S E V M P +V TF+ LI
Sbjct: 350 DMVASGIMPNTVTYNVLINGYGKV------GDLGSAVE-VYQQMTRLRCPPDVVTFSSLI 402
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK-SAGY 376
C+ + +DA++++ M + PN TF ++I SL + R E +++ +
Sbjct: 403 DGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDI 462
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
A Y + LC ++++A + + M+ G PD TY +L+ +C +R+ +A
Sbjct: 463 APQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIM 522
Query: 437 LFDEAVRNG 445
F E V G
Sbjct: 523 FFHEMVEAG 531
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L R+GR L F++M YG+ PD
Sbjct: 157 LCRSGRQADALQLFDQMTTHYGYS----------------------------------PD 182
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ L+ LD + L + G + AYN ++ + R D L
Sbjct: 183 ARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL-- 240
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E+ + D Y+ +V +FNV+I +C++ + + A++L RM E+GC P+ T +++
Sbjct: 241 -FERWIQDRVYSP---DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIV 296
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAI-GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
L + V G E++ R++ G + + ++ C ++E AM+V+ M G
Sbjct: 297 DGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGI 356
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
P++ TY++L+ + + A ++ + R
Sbjct: 357 MPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 388
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 99/236 (41%), Gaps = 11/236 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ +D A+++ +V + + T I+ + G + +++M R D +
Sbjct: 339 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR-LRCPPDVVT 397
Query: 202 LRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM- 259
+++ C G A ++ D A + I P+ ++I C + DEA L E+
Sbjct: 398 FSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELN 457
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
R YN ++D + K C K D EA + ME G + T+ +LI
Sbjct: 458 LRPDIAPQAFIYNPVIDVLCK-CGKVD------EANLIRKGMEEKGCRPDKYTYTILIIG 510
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
C R +AI F+ M E GC P+ T I L +A E D ++ R+ S G
Sbjct: 511 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM-RLASGG 565
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR-M 371
+ L+S+ + + L + E+GC + L+ SL RV + + +R +
Sbjct: 186 LSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWI 245
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ Y+ + + +C + ++++A+ + E+M G +PD+ T+++++ C N V
Sbjct: 246 QDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEV 305
Query: 432 DKANALFDEAVRNGV 446
+ + + R+GV
Sbjct: 306 SRGHEVLRRLQRDGV 320
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 138/297 (46%), Gaps = 26/297 (8%)
Query: 170 IDRLVRAGRPTQVL------------GFFERMER------DYGFKRDKDSLRLVVEKLCE 211
++ +VR G P V+ G FER+ + D+G D V++ +C+
Sbjct: 248 MEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCK 307
Query: 212 NGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
G+ A +++ + + +C + ++KG C + ++A+ L EM+ L V
Sbjct: 308 EGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVT 367
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+N ++D C+ +R+ E++L E+ VP +V T+ +I+ CK ++A+
Sbjct: 368 FNILVD---FFCQNGLVYRVIELLEQML---EHGCVP-DVITYTTVINGFCKEGLIDEAV 420
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
L M GC PN ++ +++K L A R + ++++ +M G + + + L
Sbjct: 421 MLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFL 480
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C +EQA+ + ++M +G +PD +Y ++ + D+A L + V G+
Sbjct: 481 CKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 537
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 9/293 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ PD +I G+C +G +DEA L
Sbjct: 364 DDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLL 423
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G T++Y +L LC + +AE ++ M G N TFN +
Sbjct: 424 KSMAACGCRPNTISYTIVL---KGLCSAERWV----DAEDLMSQMIEQGCSPNPVTFNTV 476
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 477 INFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 536
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + L RI + + +F+ ++ D+ Y+ +++ C D+A
Sbjct: 537 SPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIE 596
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET-LPEKMARKRRRLKQ 488
V +G Y + R L VK+ ++ T L K A ++ +K
Sbjct: 597 FLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHFMKH 649
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 9/212 (4%)
Query: 236 CDLLIKGWC-VDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
C+L++ C G +DEA RL R++ G + V+YN +L LC K R+
Sbjct: 191 CNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL---KGLCMAKRWGRVQDL 247
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
E +M G P NV TFN LI LC+ E ++ +M + GC P+ + ++
Sbjct: 248 ME----EMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLD 303
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ + + E++DRM S G Y L LC ER EQA + +M +
Sbjct: 304 GVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPL 363
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
D T+++L+ +C + V + L ++ + +G
Sbjct: 364 DDVTFNILVDFFCQNGLVYRVIELLEQMLEHG 395
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 116/303 (38%), Gaps = 37/303 (12%)
Query: 194 GFKRDKDSLRLVVEKLC-ENGYASYAEKLVKD--TANEIFPDDKICDLLIKGWCVDGKLD 250
G D + LV+ +C + G A +L++D T+ PD + ++KG C+ +
Sbjct: 183 GCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWG 242
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE----------------- 293
+ L EM R G V +N + + LCR R+
Sbjct: 243 RVQDLMEEMVRVGCPPNVVTFNTL---IGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYA 299
Query: 294 --------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
A ++L M G+ NV +N ++ LC R E A +L M +
Sbjct: 300 TVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDN 359
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
C ++ TF +L+ Q V E++++M G Y + C I++A
Sbjct: 360 DCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEA 419
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
+ + + M G P++ +Y +++ C+ R A L + + G P + +
Sbjct: 420 VMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINF 479
Query: 460 LKK 462
L K
Sbjct: 480 LCK 482
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 9/268 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L R GR G FE+M G K + ++++ C+ G A +L ++
Sbjct: 312 TYGALIQGLCRVGRIEDARGVFEKM-CGRGMKPNAVVFTILIDAHCKKGDAETMLELHRE 370
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + ++ G C L A + EM G TV Y ++D C+
Sbjct: 371 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLID---GYCK 427
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+++ LD E + +M GV + T+ LIS L K RS DA ++ M E G P
Sbjct: 428 EEE---LDMAME-IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEP 483
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TT+ ++I + + V G ++ M++ G G Y + C + +++ A +
Sbjct: 484 DNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLL 543
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRV 431
M G +PD TY++L+ C H +V
Sbjct: 544 NAMINIGVSPDDITYNILLDGHCKHGKV 571
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 13/226 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ K+ ++L++ G+L A+ + EM G V++N + +S +CR D L
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTM---ISGMCRAGD---L 291
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D AE + M GV +V T+ LI LC++ R EDA +F +M G PN F +
Sbjct: 292 DG-AETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 350
Query: 351 LIKSLYQAARVGEGDEMID---RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
LI + + G+ + M++ M+ G Y + LC ++ A + +M+
Sbjct: 351 LIDA---HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ G PD+ TY L+ +C +D A + V GV + Y
Sbjct: 408 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 453
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 15/277 (5%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
LVR G F+ M+ G +R S ++ +C G AE L + + + P
Sbjct: 250 LVRLGELASAQNVFDEMQ-SRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTP 308
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D LI+G C G++++A+ + +M G + V + ++D C+K D
Sbjct: 309 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILID---AHCKKGD----- 360
Query: 292 SEAEKVL---LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
AE +L +M GV + T+N +++ LC+ R + A + M G P+ T+
Sbjct: 361 --AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTY 418
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + E+ M + G + + Y ++ L R A V +M
Sbjct: 419 TTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 478
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G PD+ TY +++ +C V L E G
Sbjct: 479 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 515
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 7/209 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C G LD A+ L R M G Y ++ + ++ R +D A V
Sbjct: 281 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIED-------ARGVF 333
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G+ N F +LI CK +E ++L M E G P+ T+ ++ L +A
Sbjct: 334 EKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 393
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ ++ M+SAG Y + C E ++ AM + + M +G D TY
Sbjct: 394 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 453
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
L++ R A + E + G+E
Sbjct: 454 TALISGLSKAGRSADAERVLGEMMEAGLE 482
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA L + G+P + FNVL+ +L ++ A +F M G +F +I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ +A + + + RM AG Y + LC + RIE A VFEKM G
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P++ + +L+ C + L E GV
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGV 376
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L RA G M R G + D + +++ C+ A ++ ++
Sbjct: 382 TYNAIVNGLCRARDLKSASGIVVEM-RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQN 440
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E D++ LI G G+ +A+R+ EM G E Y ++D CR
Sbjct: 441 MVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVID---AFCR 497
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K D ++L +M+ G V T+NV+++ CK+ + ++A L M G P
Sbjct: 498 KGDV----KTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 553
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
++ T+ +L+ + +V + I+ +KSA
Sbjct: 554 DDITYNILLDGHCKHGKVTD----IEELKSA 580
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A + ++ + G P F VL++ L + + + D M+S G + +
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ +C ++ A ++ +M G PD TY L+ C R++ A +F++ G++
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 9/279 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P++ + + RL + GR FF+ M G KR + ++++ LC+ G A L
Sbjct: 21 PRSCNALLHRLSKVGRGDLSRKFFKDMGA-AGIKRSVFTYNIMIDYLCKEGDLEMARSLF 79
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
F PD + LI G G LDE + +M + + YN +++C K
Sbjct: 80 TQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKF 139
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R F L +M+ NG+ NV T++ I CK ++AIK F M
Sbjct: 140 ERMPKAFEF-------LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVAL 192
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PNE T+ LI + +A + E ++++ + AG + Y L LC R+++A
Sbjct: 193 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 252
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
VF M G P+ ETY L+ + ++ A + E
Sbjct: 253 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKE 291
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 136/353 (38%), Gaps = 59/353 (16%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S F D F + + F VD + V L P T S ID +AG + L E +
Sbjct: 163 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 222
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--------------------- 228
+ G K + + +++ LCE G AE++ + N
Sbjct: 223 LQ-AGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 281
Query: 229 ---------------IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
I PD + ++ G C + +L+EAK L E+ G V Y
Sbjct: 282 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 341
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
++D K + + L E +LD L+ LCK E A KLF
Sbjct: 342 LMDAYFKSGQATEALTLLEE----MLD---------------LVDGLCKNNCFEVAKKLF 382
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
M + G P++ + LI + + E + DRM G + Y + L
Sbjct: 383 DEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHS 442
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++++A ++ ++M G PD Y L+ K+ A +VD+A L +E + G+
Sbjct: 443 GQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 7/225 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FP + C+ L+ G+ D +++ ++M G + YN ++D LC++ D
Sbjct: 17 VFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMID---YLCKEGDL- 72
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A + M+ G ++ T+N LI K+ ++ I +F +M + C P+ T+
Sbjct: 73 ---EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 129
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + R+ + E + MK+ G Y F+ C +++A+ F M+
Sbjct: 130 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 189
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ TY L+ C + +A L +E ++ G+++ Y
Sbjct: 190 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 234
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 155/416 (37%), Gaps = 52/416 (12%)
Query: 105 NFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK 164
F+P+ I+ +N + + DE + F + KD D + N
Sbjct: 86 GFTPD----IVTYNSLIDGHGKLGLLDECICIFE----QMKDADCDPDVITYN------- 130
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
L +C + R + + F M+ + G K + + ++ C+ G A K D
Sbjct: 131 ALINCFCKFERMPKAFE---FLHEMKAN-GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD 186
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P++ LI C G L EA +L E+ + G +L V Y +LD + + R
Sbjct: 187 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 246
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EAE+V M GV N ET+ L+ K + E A + M E P
Sbjct: 247 MK-------EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 299
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG-------YAIGKKDYY------------ 384
+ + ++ L +R+ E +I +K +G Y Y+
Sbjct: 300 DLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 359
Query: 385 ----EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + LC E A +F++M G PD Y L+ H + +A L D
Sbjct: 360 EEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 419
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKK 496
+ G+E+ Y L V+K R L E + + + + + +KK
Sbjct: 420 MIEIGMELDLHAYTALIWGLSHSGQVQKA--RNLLDEMIGKGVLPDEVVYMCLIKK 473
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 20/277 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
++ +RAGR + L ++ ME++ R S +++ L EN A + E+
Sbjct: 332 LNGYLRAGRIEECLELWKVMEKEGC--RTVVSYNILIRGLFENAKVDEAISIW-----EL 384
Query: 230 FPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ C +L+ G C +G L++A + E G +L T AY+ + ++ LCR
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSM---INGLCR 441
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ RLD E VL M +G N N +I+ + + EDA++ F M GC P
Sbjct: 442 EG---RLD-EVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ LI L +A R E ++ M G+ Y + LC ++++ A++++
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ G PD + +++++ C+ +V+ A L+ E
Sbjct: 558 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 594
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 193/465 (41%), Gaps = 49/465 (10%)
Query: 15 QQPPHRFIS--PQSTYFSRFSPTHYL--NFLSKPFSSKPTSNPKTIDD---------PDQ 61
++ PH +S T F +S T Y+ + L + F K ++ I + P+
Sbjct: 20 EKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPED 79
Query: 62 VIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWL 121
V + ++ L I QR+H IF P S LN A++ N W
Sbjct: 80 VALTVIKAYAKNSMPDQALDIFQRMHEIFG-CQPGIRSYNSLLN-------ALIESNKWD 131
Query: 122 TQNANFSHTD--------ETLSFFTDYFGRRKDF---KAIHDFLVDNKEVLGPKTLASCI 170
+ F + + +T + R+K F K + +++ + + + I
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLI 191
Query: 171 DRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENG----YASYAEKLVKDT 225
+ L + G + L F+ M ER G D ++++ + G + E+L+K
Sbjct: 192 NSLAKNGYMSDALKLFDEMPER--GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ ++P+ +++I G C GK DE+ + M + Y+ + + LC
Sbjct: 250 S--VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL---IHGLCGSG 304
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ LD A +V +M NGV +V +N +++ + R E+ ++L+ M + GC
Sbjct: 305 N---LDG-ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TV 359
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
++ +LI+ L++ A+V E + + + Y + LC + +A+S+ E+
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+ + D+ Y ++ C R+D+ + D+ ++G + P
Sbjct: 420 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 8/248 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLA 256
D + ++V LC+NGY + A ++++ N D +I G C +G+LDE +
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+M + G + N +++ + + +D R +M G V T+N L
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF-------FGNMVSKGCFPTVVTYNTL 505
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ L K R +A L M G PN T+ +L+ L Q ++ + + G+
Sbjct: 506 INGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 565
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
K + + LC ++E A+ ++ +MK P+ T++ LM + ++A+
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625
Query: 437 LFDEAVRN 444
++D +++
Sbjct: 626 IWDHILQS 633
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 139/317 (43%), Gaps = 35/317 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTA- 226
I+ L + G+ + + RM+++ +R +D + ++ LC +G A ++ K+ A
Sbjct: 262 INGLCKCGKFDESFEIWHRMKKN---ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD + + ++ G+ G+++E L + M + G V+YN ++ + + + +
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDE 377
Query: 287 PFRL-------DSEAEKVLLDMEYNGVPRN-------------------VETF--NVLIS 318
+ D A+ + + +G+ +N ++TF + +I+
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC+ R ++ + +M + GC PN +I +A+++ + M S G
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + L ER +A ++ ++M G P+ TY LLM C ++D A L+
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557
Query: 439 DEAVRNGVEVKPKEYRV 455
+A+ G + K + +
Sbjct: 558 CQALEKGFKPDVKMHNI 574
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKDTANE 228
ID + G +ER+ + + S +++ LC+ G + E + NE
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
D LI G C G LD A R+ +EM G V YN +L+ + R ++
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L KV ME G R V ++N+LI L + + ++AI ++ + E C + T+
Sbjct: 346 EL----WKV---MEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VL+ L + + + +++ ++ + Y + LC R+++ V ++M
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ + ++ + ++++ A F V G
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 131/326 (40%), Gaps = 49/326 (15%)
Query: 162 GPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
PK+L+ I L P L F+ + R G+ ++++L + ++
Sbjct: 4 APKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVS 63
Query: 220 KLVK--DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILD 276
++V+ T P+D + +IK + + D+A + + M+ G + G +YN +L+
Sbjct: 64 RIVELIRTQKCKCPED-VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN 122
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE--------- 327
+ + K D EAE L E G+ N++T+N+LI C+ ++ +
Sbjct: 123 ALIE-SNKWD------EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 175
Query: 328 --------------------------DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
DA+KLF M E G P+ + +LI ++ +
Sbjct: 176 WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 235
Query: 362 GEGDEMIDR-MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E+ +R +K Y + LC + +++ ++ +MK + D TY
Sbjct: 236 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
L+ C +D A ++ E NGV
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGV 321
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 7/219 (3%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+I P+ LI G C G+++ A+ L EM G +L V +N +D CR+
Sbjct: 352 DIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMD---GYCRRG-- 406
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
++D EA ++ ME G+ +V T+N+L + LCK+ R ++A + M E G PN T
Sbjct: 407 -KMD-EALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVT 464
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F + I+ + + E + + M+ G Y + C E+++QA + +M
Sbjct: 465 FTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMI 524
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PD TY L+ C RVD+A LF+E G+
Sbjct: 525 NKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGI 563
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 11/274 (4%)
Query: 175 RAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPD 232
R G + F+ M +RD + + ++ +C+ G AE L+ + ++ + +
Sbjct: 334 RLGNMKRAFALFDEMSQRD--IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLN 391
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
I + + G+C GK+DEA RL M + G YN + + + KL R
Sbjct: 392 LVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRY-------D 444
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA+ +L M GV NV TF + I CK +A +LF M + G PN T+ LI
Sbjct: 445 EAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLI 504
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ + +V + ++ M + G Y + C + R+++A+ +F +M+ G
Sbjct: 505 DAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGIT 564
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ TY +++ R D+A L+DE ++ G+
Sbjct: 565 RNVATYTSMISGLSKEGRADEAFKLYDEMMKIGL 598
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 128/300 (42%), Gaps = 9/300 (3%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
++D++ + V+ ++ + L R G + FF RM F+ SL LV++ L
Sbjct: 167 VYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVL 226
Query: 210 CENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
C G A++L+ + + + P+ + L+ + + + M +
Sbjct: 227 CRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFS 286
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
Y+ ++ S D EAEK+ +M + +V ++ +IS ++ +
Sbjct: 287 VATYSILIQWYSS---SGDI----EEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMK 339
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A LF M + PN T+ LI + +A ++ + ++ M+S G + + +
Sbjct: 340 RAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTM 399
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
C ++++A+ + M+ G N D TY++L C +R D+A + + V GV+
Sbjct: 400 DGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVK 459
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI-FPDDKICDLLIKGWCVDGKLDEA 252
G K + + + +E C+ G + AE+L +D + P+ + LI +C K+ +A
Sbjct: 457 GVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQA 516
Query: 253 KRLAREMYRGGFELGTVAYNCIL--DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
++ EM G Y+ ++ +C+ R+D EA K+ +M G+ RNV
Sbjct: 517 HKIKSEMINKGLLPDLYTYSSLIHGECIVG--------RVD-EALKLFNEMRLKGITRNV 567
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
T+ +IS L K R+++A KL+ M + G P++ F L+ S ++
Sbjct: 568 ATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 157/372 (42%), Gaps = 37/372 (9%)
Query: 86 LHLIFSHVTPTPSL-VQSTLNFSPEAGRAILGFNHWL-TQNANFS---HTDETLSFFTDY 140
LH I S +TP + V S P + L F H+L TQ++N S L +
Sbjct: 47 LHSIISCITPHVTYRVLSQPILQPHS---CLAFFHFLKTQHSNISLKPDLKAHLILISRL 103
Query: 141 FGRRK--DFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
F RK K+I + LV + ++ P ++S +D LV V F + + R R
Sbjct: 104 FEARKFATMKSILNGLVTDSDIECP--VSSIVD-LVDEFESHFVEKFCDMLFRVCSDNRL 160
Query: 199 KDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
D V + + E G + +++ C +L+ G++D R
Sbjct: 161 FDETIRVYDYVEEKG---------------LVIEERSCFVLLLALKRCGEVDFCVRFFHR 205
Query: 259 MYRGG-FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR-NVETFNVL 316
M FE+ + ++D LCR+ + +A++++ +M G+ + NV T+N L
Sbjct: 206 MVESNKFEIRVQSLTLVIDV---LCRRGEV----EKAKELMDEMVGKGIVKPNVFTYNTL 258
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
++ + + ++ M + + T+ +LI+ + + E +++ + M+
Sbjct: 259 LNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNI 318
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y ++ + +++A ++F++M P++ TY L+ C +++ A
Sbjct: 319 EMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEI 378
Query: 437 LFDEAVRNGVEV 448
L E GV++
Sbjct: 379 LLLEMQSKGVDL 390
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 9/284 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T + I L G+ + L F++M D GF+ + + ++ LC+ G S A +L+
Sbjct: 135 PTTFTTLIRGLCVEGKIGEALHLFDKM-IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 193
Query: 223 KDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ PD I +I C D ++ EA L +M G Y ++ + L
Sbjct: 194 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 253
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C K +L M + + +V F+ ++ LCK + +A ++ M + G
Sbjct: 254 CEWK-------HVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 306
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ T+ L+ + + E ++ D M G+A Y + C I +I++AM
Sbjct: 307 EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMY 366
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+FE+M PD++TY+ LM C R+ A ALF E V G
Sbjct: 367 LFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 119/290 (41%), Gaps = 9/290 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
S ID L + + T+ F +M G D + +V LC + L+
Sbjct: 209 TSIIDSLCKDRQVTEAFNLFSQMV-GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 267
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N +I PD I ++ C +GK+ EA + M + G E V Y ++D C +
Sbjct: 268 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD---GHCLQS 324
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ EA KV M G +V ++ LI+ CKI + + A+ LF M P+
Sbjct: 325 EM----DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ L+ L R+ + + M + G Y L LC +E+AM++ +
Sbjct: 381 KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKA 440
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ NPD + Y++++ C ++ A LF G+ Y +
Sbjct: 441 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 490
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 133/318 (41%), Gaps = 12/318 (3%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKD 224
A + + + + VL +M+ +G + +L +++ C +A L K
Sbjct: 68 FAKLLTSIAKMKHYSTVLSLSTQMD-SFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI 126
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
PD LI+G CV+GK+ EA L +M GF+ V Y + ++ LC+
Sbjct: 127 LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL---INGLCKV 183
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ S A ++L ME +V + +I +LCK R+ +A LF +M G P+
Sbjct: 184 GNT----SAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 239
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ L+ +L ++++M ++ + + LC ++ +A + +
Sbjct: 240 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 299
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI 464
M G PD TY LM C + +D+A +FD VR G Y +
Sbjct: 300 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT---LINGYC 356
Query: 465 AVKKGKKRETLPEKMARK 482
+ K K L E+M RK
Sbjct: 357 KIHKIDKAMYLFEEMCRK 374
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 115/237 (48%), Gaps = 8/237 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV+ LC+ G + A ++V + PD L+ G C+ ++DEA ++ M R G
Sbjct: 281 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 340
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F ++Y +++ K+ + L E + E+ +P + +T+N L+ LC +
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEE----MCRKEW--IP-DTKTYNTLMYGLCHV 393
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R +DAI LF+ M G P+ T+ +L+ SL + + E ++ ++++ + Y
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ +C +E A +F + + G +P TY++++ C +++AN LF E
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 127/293 (43%), Gaps = 9/293 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V++K + ++ +D L + G+ T+ + M + G + D + +++ C
Sbjct: 266 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR-GVEPDVVTYTTLMDGHCLQS 324
Query: 214 YASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A K+ + F D I LI G+C K+D+A L EM R + T YN
Sbjct: 325 EMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 384
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ + + R +D L E M G ++ T+++L+ +LCK R E+A+ L
Sbjct: 385 TLMYGLCHVGRLQDAIALFHE-------MVARGQMPDLVTYSILLDSLCKNRHLEEAMAL 437
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
+ +P+ + ++I + +A + ++ + S G Y + LC
Sbjct: 438 LKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCK 497
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ +A +F +M + +PD TY+ + + +N +A L +E + G
Sbjct: 498 RGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P ++ F L++++ K++ + L +M +G PN T +LI S RVG
Sbjct: 62 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 121
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ ++ G+ + + LC +I +A+ +F+KM +G P+ TY L+ C
Sbjct: 122 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 181
Query: 427 AHNRVDKA 434
A
Sbjct: 182 KVGNTSAA 189
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 30/221 (13%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWC 244
F+ M R GF D S ++ C+ A L ++ E PD K + L+ G C
Sbjct: 333 FDMMVRK-GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLC 391
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL-----------DSE 293
G+L +A L EM G V Y+ +LD + K ++ L D +
Sbjct: 392 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQ 451
Query: 294 AEKVLLD-----------------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+++D + G+ +V T+N++I LCK +A KLF M
Sbjct: 452 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C P+ T+ + + Q ++++ M + G++
Sbjct: 512 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLD 250
D GFK S ++ L E G + + ++++ FP C++L+ C +G+
Sbjct: 184 DCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFR 243
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+A+ + ++M +V YN IL K R K A VL DME + V +V
Sbjct: 244 KAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGRFK-------AALCVLEDMERDSVQADV 295
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N++I LC+I+RS A L RM + P+E T+ LI ++ ++ + +
Sbjct: 296 YTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNH 355
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M Y + C RI++A+S+ +M+ G P TY L+ +C +
Sbjct: 356 MLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSM 415
Query: 431 VDKANALFDEAVRNGVEV 448
+ A L ++ G+ +
Sbjct: 416 LGPAIYLMEDLKSRGITI 433
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 9/278 (3%)
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPD 232
V+ GR L E MERD + D + ++++KLC ++ A L+K +++ PD
Sbjct: 271 VKKGRFKAALCVLEDMERD-SVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPD 329
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ + LI G+ +GK++ A+ + M R Y ++D CR + R+D
Sbjct: 330 ECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMID---GYCRNR---RID- 382
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A +L +M+ GV + T++ L++ CK+ AI L + G N+T +LI
Sbjct: 383 KALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILI 442
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
Q + + +++ M G Y + +C + ++ + + +M+ G
Sbjct: 443 DGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGIL 502
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
P+ Y L+ +C V +A F + R G+ P
Sbjct: 503 PNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANP 540
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 9/213 (4%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
KT ++ I+ L+R G M + G + + +V C G A +L +
Sbjct: 892 KTFSAMINGLIRKGYLDHSHKVLHEMLQ-VGLQPNHTHYIALVNAKCRVGEIDRAFRLKE 950
Query: 224 DT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ A I P + +I+G C GKL+EA + M R G + ++ + K
Sbjct: 951 EMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKES 1010
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ D L E L ++ V ++NVLI+ LCK + DA+ L+ M G
Sbjct: 1011 KIADALHLKRLMELCRLRVD-------VVSYNVLITGLCKDKHISDALDLYGEMKSKGLW 1063
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
PN TT++ L ++Y RV G+E+++ ++ G
Sbjct: 1064 PNITTYITLTGAMYSTGRVQNGEELLEDIEERG 1096
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKDTANE 228
ID + G ++ + M D G D + ++ +C E L + +
Sbjct: 442 IDGFCQVGEISKAKQILKSMFED-GIDPDVITYSALINGMCRMAKMHETKEILSRMQKSG 500
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+D + LI +C G + EA + ++YR G V +N +L +
Sbjct: 501 ILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYR-------E 553
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +EAE M + + +FN +I + C A ++ M +G PN T+
Sbjct: 554 GMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTY 613
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L++ L Q + + + + + +AI +K + L +C +++A+ + EKM
Sbjct: 614 QNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIK 673
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ PD TY +L++ +C ++ A + + GV
Sbjct: 674 NNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGV 711
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 44/309 (14%)
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPD 232
V+ G+ ++ L ++ M R G + D + RL++ L E G A K ++ E IFPD
Sbjct: 797 VKRGQFSKSLYLYKYMVRK-GIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 855
Query: 233 DKICDLLIKGW--------------CVD---------------------GKLDEAKRLAR 257
+ D+LI + C+ G LD + ++
Sbjct: 856 RLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLH 915
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM + G + Y +++ ++ FRL E + + + VP V ++ I
Sbjct: 916 EMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGI------VPAEVAESSI-I 968
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LC+ + E+A+ +F M G P TF L+ SL + +++ + + M+
Sbjct: 969 RGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLR 1028
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y +T LC + I A+ ++ +MK+ G P+ TY L + RV L
Sbjct: 1029 VDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEEL 1088
Query: 438 FDEAVRNGV 446
++ G+
Sbjct: 1089 LEDIEERGL 1097
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 96/220 (43%), Gaps = 7/220 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
NE++P+ ++L+ G+ G+ ++ L + M R G V Y ++ +S+ C D
Sbjct: 780 NEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE-CGLID 838
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
A K L M G+ + F++LI+ + + +A+++F M P+
Sbjct: 839 I------AVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSK 892
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
TF +I L + + +++ M G Y + C + I++A + E+M
Sbjct: 893 TFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEM 952
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
K G P ++ C ++++A +F +R+G+
Sbjct: 953 KAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGM 992
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 14/271 (5%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EKLVKDTANE 228
L + G Q F + D F D+ + ++ +C G A EK++K N
Sbjct: 620 LCQGGHLVQARQFMSCL-LDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIK---NN 675
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD +L+ G+C GK+ A + + M G TVAY C+L+ + + K
Sbjct: 676 CLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 735
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ E + G+ + +N L++ K R ++ M + +PN ++
Sbjct: 736 YVFHEI------ICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASY 789
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+L+ + + + + M G Y + L I+ A+ EKM
Sbjct: 790 NILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVL 849
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+G PD +D+L+T + +++ A +F+
Sbjct: 850 EGIFPDRLVFDILITAFSEKSKMHNALQVFN 880
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP--FRLDSEA 294
+LL+K + + K+ +A M GF+ V+ N IL+ + + K F +S A
Sbjct: 160 ELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLA 219
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLC---KIRRSEDAIKLFYRMGEWGCH-PNETTFLV 350
K P V T N+L+++LC + R++ED ++ +M CH N T+
Sbjct: 220 RK---------FPLGVTTCNILLNSLCTNGEFRKAEDMLQ---KMKS--CHISNSVTYNT 265
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++ + R +++ M+ Y + +LC I+R +A + ++M+ D
Sbjct: 266 ILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDD 325
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD TY+ L+ + +++ A +F+ +R +
Sbjct: 326 LTPDECTYNTLINGFFREGKINHARYVFNHMLRQNL 361
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 120/304 (39%), Gaps = 22/304 (7%)
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
V P + + R G T+ F + M R D S +++ C G A
Sbjct: 537 VANPVIHNALLHAFYREGMITEAEHFRQYMSR-MNISFDSVSFNRIIDSYCHRGNIVGAF 595
Query: 220 KLVKDTANEIFPDDKICDL--LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+ D + + +C L++G C G L +A++ + F + +N +L
Sbjct: 596 SVYDDMVRYGYSPN-VCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALL-- 652
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+CR + EA + M N ++ T+ +L+S C+ + A+ + M
Sbjct: 653 -LGICR----YGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMML 707
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM--KSAGYAIGKKDYYEFLTRLCGIER 395
E G P+ + L+ L +V + + K YA D + + + G +
Sbjct: 708 EKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYA----DCIAYNSLMNGYLK 763
Query: 396 IEQAMSVFEKMKTDGHN----PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+ ++ ++M +D + P+S +Y++LM + + K+ L+ VR G+
Sbjct: 764 -SRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNV 822
Query: 452 EYRV 455
YR+
Sbjct: 823 TYRL 826
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 180/444 (40%), Gaps = 50/444 (11%)
Query: 68 SGELLENLEADPLPISQ-RLH---LIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQ 123
SG + +L A L +S R H L F+ + S L P + + FN LT
Sbjct: 13 SGTQMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPP--STVDFNKLLTS 70
Query: 124 NANFSH--TDETLSFFTDYFGRRKDFKAIH--------------DFLVDNKEV-LGPKTL 166
A H T +LS D FG + +H F V K + LG +
Sbjct: 71 IAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPD 130
Query: 167 ASCIDRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
+ L+R G+ + L F++M + GF+ D + ++ LC+ G S A +L+
Sbjct: 131 TATFTTLIRGIYVEGKIGEALHLFDKMIGE-GFRPDVVTYGTLINGLCKVGNTSAAIRLL 189
Query: 223 -----KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
K+ +F + I D L C D ++ EA L EM G YN ++
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSL----CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHA 245
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ LC K +L +M + + +V +FN ++ LCK + +A + +M
Sbjct: 246 LCNLCEWK-------HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ G PN T+ L+ + + E ++ D M G Y + C I+RI+
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV-- 455
+AM +F +M PD+ TY L+ C R+ A ALF E V YR+
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418
Query: 456 ----DPRYLKKPIAVKKGKKRETL 475
RYL + +A+ K + L
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNL 442
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 12/286 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D S VV+ LC+ G + A +V K + P+ L+ G C+ ++DEA ++
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M G ++YN +++ K+ R L E + L +P V T++ L
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL------IPDTV-TYSTL 382
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I LC + R +DAI LF+ M PN T+ +L+ L + + E ++ ++ +
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ + +C +E A +F + + G PD TY +++ C +D+A+
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502
Query: 437 LFDEAVRNGVEVKPKEYRVDPR-YLKKPIAVKKGKKRETLPEKMAR 481
LF E NG + Y R +L+ + + + L E +AR
Sbjct: 503 LFREMDENGCTLNGCIYNTITRGFLRNN---ETSRAIQLLQEMVAR 545
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + + T+ F M G D + ++ LC + L+ + + +
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD + ++ C +GK+ EA + +M + G E V Y ++D L
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM---- 322
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA KV M G NV ++N LI+ CKI+R + A+ LF M P+ T+
Sbjct: 323 ---DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 379
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L R+ + + M + Y L LC + +AM++ + ++
Sbjct: 380 STLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEG 439
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+PD + ++ + C ++ A LF G++ Y +
Sbjct: 440 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSI 486
>gi|302820653|ref|XP_002991993.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
gi|300140235|gb|EFJ06961.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
Length = 331
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 124/277 (44%), Gaps = 15/277 (5%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTANEIF 230
L+RA R L F +ME++ RD D S +VV LC+ A L+ E F
Sbjct: 65 LIRAKRVDDALDHFAKMEKN----RDTDLESYSIVVSALCDEKRVDKAVDLLYSMNEESF 120
Query: 231 -PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD I + +I+ + +L A L +M E G + + + + C K+
Sbjct: 121 LPDVGIYNRIIEAM-SELQLHGAYLLFEQM----IEAGVLPNSATFSFLVRGCFKRGFL- 174
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
E ++L M +G + TFN +I LCK+RR E+A + M GC P+ T
Sbjct: 175 --DEGSELLRQMVESGCVPELATFNAVIEGLCKVRRVENARWVMNEMASQGCSPDAATHR 232
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
L+++L + ++ E + RM + G Y + +LC R +A +F++M
Sbjct: 233 FLLEALCKMDKLDEAHRHVQRMIATGCLPDTVTYSFLIKKLCKEGRPMEAHRIFKEMIGI 292
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PDS Y+LL+ CA ++ LF + GV
Sbjct: 293 GREPDSSIYNLLLASHCAASKATACYELFTQMKERGV 329
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 42/241 (17%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+++G+C G +D A R+ +M + GF + +N IL + + R D LD A+
Sbjct: 26 MVEGYCYVGDMDPATRILAQMEKMGFHIDVGLHNAILRGLIRAKRVDDA--LDHFAK--- 80
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG--------------------- 337
ME N ++E++++++S LC +R + A+ L Y M
Sbjct: 81 --MEKNR-DTDLESYSIVVSALCDEKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMSEL 137
Query: 338 -------------EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
E G PN TF L++ ++ + EG E++ +M +G +
Sbjct: 138 QLHGAYLLFEQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFN 197
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ LC + R+E A V +M + G +PD+ T+ L+ C +++D+A+ +
Sbjct: 198 AVIEGLCKVRRVENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIAT 257
Query: 445 G 445
G
Sbjct: 258 G 258
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 8/210 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+++ C + ++D+A L M F YN I++ +S+L + E
Sbjct: 94 IVVSALCDEKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMSELQLHGAYLLFEQMIEA- 152
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
GV N TF+ L+ K ++ +L +M E GC P TF +I+ L +
Sbjct: 153 -------GVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFNAVIEGLCK 205
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
RV +++ M S G + + L LC ++++++A ++M G PD+ T
Sbjct: 206 VRRVENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIATGCLPDTVT 265
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
Y L+ K C R +A+ +F E + G E
Sbjct: 266 YSFLIKKLCKEGRPMEAHRIFKEMIGIGRE 295
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 17/287 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I LV+AG + + M +D G D + V++ C++G + A +L++ E+
Sbjct: 452 IHSLVKAGFARETYELYYAM-KDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLE----EM 506
Query: 230 FPDDKICDLLIKGWCVDG-----KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
++ G VDG +LDEA L E G EL V Y+ ++D K+ R
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRV 566
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
EA V+ +M G+ NV T+N L+ L K +A+ F M + C PN
Sbjct: 567 -------DEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPN 619
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ T+ +LI L + + + M+ G Y ++ L + QA S+FE
Sbjct: 620 QITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFE 679
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+ + G PDS +Y+ ++ NR A LF+E G + K
Sbjct: 680 RFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTK 726
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 152/358 (42%), Gaps = 61/358 (17%)
Query: 160 VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
V+ + +C L + G+ + L FE M+RD + + +++ LC+ G A
Sbjct: 236 VVAYNCILTC---LGKKGKTDKALRIFEEMKRDA--MPNLPTYNIIIGMLCKAGNVEAAF 290
Query: 220 KLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
K V+D E +FP+ + +++I C KLDEA + M + ++D
Sbjct: 291 K-VRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDG 349
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ K R D +R+ E++L + + +P NV + LI N K R ED K++ M
Sbjct: 350 LGKQGRVDDAYRI---YERML---DADQIP-NVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402
Query: 338 EWGCHPN---------------ET--------------------TFLVLIKSLYQAARVG 362
GC P+ ET ++ +LI SL +A
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFAR 462
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E E+ MK G + + Y + C ++ +A + E+MKT GH+P TY ++
Sbjct: 463 ETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVV 522
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYLKKPIAVKKG 469
+R+D+A LF+EA NG+E+ Y RVD YL ++KG
Sbjct: 523 DGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 107/272 (39%), Gaps = 45/272 (16%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-NGYASYAEKLVKDTAN 227
CID + G+ FF M+ + G D + ++ LC+ N E + N
Sbjct: 137 CIDCFGKVGKVDMAWKFFHEMKAN-GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQN 195
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P + +I G+ GK DEA L G VAYNCIL C+ K +
Sbjct: 196 RQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKA 255
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
R+ E M+ + +P N+ T+N++I LCK E A K+ M E G PN T
Sbjct: 256 LRIFEE-------MKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRT 307
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
++I RLC +++++A S+FE M
Sbjct: 308 INIMID-----------------------------------RLCKAQKLDEACSIFEGMD 332
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+PD T+ L+ RVD A +++
Sbjct: 333 YKVCSPDGATFCSLIDGLGKQGRVDDAYRIYE 364
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 137/289 (47%), Gaps = 19/289 (6%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR-DKDSLRLVVEKLCENGYASYAEKLV 222
+T+ IDRL +A + + FE M DY D + +++ L + G A ++
Sbjct: 306 RTINIMIDRLCKAQKLDEACSIFEGM--DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIY 363
Query: 223 KDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ A++I P+ + LI+ + + ++ ++ +EM R G + N +DCV K
Sbjct: 364 ERMLDADQI-PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFK 422
Query: 281 LCRKKDPFRLDSEAEK---VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
E EK + +++ G + ++++LI +L K + + +L+Y M
Sbjct: 423 A----------GETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMK 472
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ GC + + +I ++ +V + ++++ MK+ G+ Y + L I+R++
Sbjct: 473 DQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLD 532
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+A +FE+ K++G + Y L+ + RVD+A + +E ++ G+
Sbjct: 533 EAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGL 581
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+D+ A +L +M+ N ++ +NV I K+ + + A K F+ M G P++ T+
Sbjct: 111 RVDA-ALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTY 169
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ L +A R+ E E+ ++M+ Y + + ++A S+ E+ +
Sbjct: 170 TSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRA 229
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P Y+ ++T + DKA +F+E R+ +
Sbjct: 230 KGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM 267
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 88/226 (38%), Gaps = 42/226 (18%)
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
D +++ EM GF G Y C+ + V+ + + EA +L M +
Sbjct: 7 FDYLEQILGEMSIAGF--GPTNYTCV-ELVASCVKSRKLI----EAFDLLQMMRHFKFRP 59
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+ LI L ++ S+ + LF +M E G N LI+ + RV ++
Sbjct: 60 AFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLL 119
Query: 369 DRMKSAGY---------------AIGKKD--------------------YYEFLTRLCGI 393
D MKS + +GK D Y + LC
Sbjct: 120 DEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKA 179
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
R+++A+ +FE+M+ + P + Y+ ++ + + + D+A +L +
Sbjct: 180 NRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLE 225
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI G C K ++A +EM + G + T+ Y + +S L + + + S E+
Sbjct: 625 ILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAM---ISGLAKSGNVAQASSLFERF 681
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY- 356
G+P + ++N +I L R+ DA +LF GC + T + L+ +L+
Sbjct: 682 RAS---GGIPDSA-SYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHK 737
Query: 357 -----QAARVG 362
QAA VG
Sbjct: 738 AECLEQAAIVG 748
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D I + LI G C K A L M G++ V Y ++D LC+ D LD
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLID---GLCKSGD---LD 62
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ A+ +L M G NV T+ LI LCK RR DAI+ RM GC P+ T+ L
Sbjct: 63 A-AQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSL 121
Query: 352 IKSLYQAARVGE-GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
I L A R+ + G + + M +G Y F++ LC ++++ + + E+M G
Sbjct: 122 IHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGG 181
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+PD T+ +++ C NR+D A +F + G Y +
Sbjct: 182 ISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSI 226
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F L YN + ++ LC+ + P A ++L M NG +V T+ LI LCK
Sbjct: 6 FRLDAAIYNTL---IAGLCKARKP----RHALELLHVMAANGYDASVVTYTTLIDGLCKS 58
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ A L +M + GC PN T+ LI L +A R + + + RM +G Y
Sbjct: 59 GDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTY 118
Query: 384 YEFLTRLCGIERIEQAMSVF-EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ LC R++ A V E M G PD TY+ ++ C ++DK + +E
Sbjct: 119 NSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMD 178
Query: 443 RNGVE 447
R G+
Sbjct: 179 RGGIS 183
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 10/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L ++G ++M D G + + +++ LC+ A + VK
Sbjct: 47 TYTTLIDGLCKSGDLDAAQALLQKMA-DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKR 105
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLARE-MYRGGFELGTVAYNCILDCVSKLC 282
+ PD + LI G C+ ++D+A + +E M G V YN +S LC
Sbjct: 106 MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTF---ISGLC 162
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ +LD E +L +M+ G+ +V TF +IS LCK R +DA ++F M E GC
Sbjct: 163 KAG---KLDKGLE-MLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCV 218
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ +++ +L +A R+ +E+++ M +G+ Y + L IE A
Sbjct: 219 PDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWA 278
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+E+ G + T++ + C + A + + +G
Sbjct: 279 YEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 121/299 (40%), Gaps = 46/299 (15%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ + ++++ + T + I L +AG+ + L E M+R G D + ++ L
Sbjct: 138 LQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG-GISPDVVTFCSIISGL 196
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG----- 263
C+ A ++ K PD +++ +LD + + M + G
Sbjct: 197 CKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALS 256
Query: 264 ---------------FELGTVAY------NCILDC------VSKLCRK-KDPFRLDSEAE 295
E + AY C+++ + LCR K P A+
Sbjct: 257 ATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPL-----AK 311
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKS 354
+LL M +G N+ ++N +I LCK +DA KL +M + G C P+ F LI
Sbjct: 312 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 371
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEKMKTDG 410
+A R+ + +++ MK+ + D + T + G + ++QA + E+M+ G
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICV--PDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 8/243 (3%)
Query: 206 VEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
V+ C+ A KL+ + N+ PD ++LI G C +G+LDEA + M G
Sbjct: 89 VQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 148
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ + +N IL + R D AEK+L DM G +V TFN+LI+ LC+
Sbjct: 149 QPNVITHNIILRSMCSTGRWMD-------AEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
AI + +M GC PN ++ L+ + ++ E +D M S G Y
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 261
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
LT LC +++ A+ + ++ + G +P TY+ ++ + ++A L DE R
Sbjct: 262 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321
Query: 445 GVE 447
G++
Sbjct: 322 GLK 324
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLL 239
Q + + M R+ G K D + +++ +C+ G A K + + + P+ +++
Sbjct: 100 QAMKLLDEM-RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 158
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
++ C G+ +A++L +M R G V +N + ++ LCR+ L A +L
Sbjct: 159 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL---INFLCRQG----LLGRAIDILE 211
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M +G N ++N L+ CK ++ + AI+ M GC+P+ T+ L+ +L +
Sbjct: 212 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 271
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+V E+++++ S G + Y + L + + E+A+ + ++M+ G PD TY
Sbjct: 272 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 331
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
L++ +VD+A F + G+ ++P
Sbjct: 332 SLVSGLSREGKVDEAIKFFHDL--EGLGIRP 360
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 176/408 (43%), Gaps = 42/408 (10%)
Query: 36 HYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTP 95
H+L+FL S+ P +++ LS + PLPI + +IF+ +
Sbjct: 7 HHLDFLRLLDSTAPDPKCNKNKSKTKIVHYGLSIPPFHLQQKTPLPIP--IFIIFALIIS 64
Query: 96 TPSLV---QSTL--NFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
S+ Q TL FS + GF+ ++ S + + + R K K
Sbjct: 65 VVSICCINQQTLFPCFS------LSGFSFYVQTTCKESGVGQAMKLLDEM--RNKGSKP- 115
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
D + N VL I+ + + GR + + F M YG + + + +++ +C
Sbjct: 116 -DVVTYN--VL--------INGICKEGRLDEAIKFLNNMP-SYGCQPNVITHNIILRSMC 163
Query: 211 ENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
G AEKL+ D + P ++LI C G L A + +M G ++
Sbjct: 164 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 223
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+YN +L C++K ++D E + + M G ++ T+N L++ LCK + + A
Sbjct: 224 SYNPLLH---GFCKEK---KMDRAIEYLDI-MVSRGCYPDIVTYNTLLTALCKDGKVDVA 276
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+++ ++ GC P T+ +I L + + +++D M+ G K D + +
Sbjct: 277 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL---KPDIITYSSL 333
Query: 390 LCGIER---IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ G+ R +++A+ F ++ G P++ TY+ +M C + D+A
Sbjct: 334 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 381
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 58/145 (40%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++ F+ + CK A+KL M G P+ T+ VLI + + R+ E + +
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M S G + L +C R A + M G +P T+++L+ C
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
+ +A + ++ +G Y
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSY 225
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 9/273 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TANEIFPDDK 234
GR L M G ++ + V+ C+ G A K+ + T E+ P+
Sbjct: 199 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 258
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ + LI G+C GKLD A M G + YN ++ + R + + L E
Sbjct: 259 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE- 317
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
M G+ +V T+N+LI+ CK + A+++F M G T+ LI +
Sbjct: 318 ------MGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 371
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + +V E D++ D G Y + I++A + +M+ PD
Sbjct: 372 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY+ LM C RVD+A L DE + G++
Sbjct: 432 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 464
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+ +++ LC G + A +L++ P+ + +I G+C G++ A + REM
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR---PNAVTYNTVIAGFCSRGRVQAALDIMREMR 212
Query: 261 -RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLIS 318
RGG Y + +S C+ R+D EA KV +M G V +N LI
Sbjct: 213 ERGGIAPNQYTYGTV---ISGWCKVG---RVD-EAVKVFDEMLTKGEVKPEAVMYNALIG 265
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + + A+ RM E G T+ +L+ +L+ R E E+++ M G A+
Sbjct: 266 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAL 325
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A+ +FE M G TY L+ +V + + LF
Sbjct: 326 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 385
Query: 439 DEAVRNGV 446
DEAVR G+
Sbjct: 386 DEAVRRGI 393
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 11/272 (4%)
Query: 177 GRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI 235
G+ L + +RM ER G + L+V L +G + A +LV++ + D
Sbjct: 271 GKLDTALLYRDRMVER--GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVF 328
Query: 236 C-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
++LI G C +G + +A + M R G V Y ++ +SK + ++ +L EA
Sbjct: 329 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 388
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+ G+ ++ +N LI++ + A ++ M + P++ T+ L++
Sbjct: 389 VR-------RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 441
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L RV E ++ID M G Y ++ ++ A+ + +M G NP
Sbjct: 442 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
TY+ L+ C + + D A + E V NG+
Sbjct: 502 LLTYNALIQGLCKNGQGDDAENMVKEMVENGI 533
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 18/240 (7%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++++ C GK A L R+M R V YN + ++ C + R+ + A
Sbjct: 158 NIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTV---IAGFCSRG---RVQA-ALD 206
Query: 297 VLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKS 354
++ +M E G+ N T+ +IS CK+ R ++A+K+F M G P + LI
Sbjct: 207 IMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 266
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
++ DRM G A+ Y + L R +A + E+M G D
Sbjct: 267 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALD 326
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
TY++L+ C V KA +F+ R GV Y L KKG+ +ET
Sbjct: 327 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS-----KKGQVQET 381
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P TFN+++ +LC + A++L +M PN T+ +I RV
Sbjct: 150 LPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAAL 205
Query: 366 EMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMT 423
+++ M+ G A + Y ++ C + R+++A+ VF++M T G P++ Y+ L+
Sbjct: 206 DIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 265
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++D A D V GV + Y +
Sbjct: 266 GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 297
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 24/257 (9%)
Query: 150 IHDFLVDNK--------EVLGPKTLA-------SCIDRLVRAGRPTQVLGFFERMERDYG 194
+H +D + E +G K LA I+ + G + L FE M R G
Sbjct: 299 VHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSR-RG 357
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAK 253
+ + ++ L + G +KL + I PD + + LI G +D A
Sbjct: 358 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 417
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ EM + V YN ++ + L R EA K++ +M G+ ++ T+
Sbjct: 418 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV-------DEARKLIDEMTKRGIQPDLVTY 470
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LIS +DA+++ M G +P T+ LI+ L + + + + M+ M
Sbjct: 471 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 530
Query: 374 AGYAIGKKDYYEFLTRL 390
G Y + L
Sbjct: 531 NGITPDDSTYISLIEGL 547
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 158/369 (42%), Gaps = 18/369 (4%)
Query: 81 PISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDY 140
P S L F+ ++ Q TL +A L FN W+ + FSH +T +
Sbjct: 70 PWSDELLSSFTTSLSKTTVFQ-TLRHIKVPTKAFLFFN-WIHEKG-FSHNPQTYFIMLEI 126
Query: 141 FGRRKDFKAIHDFLVD-----NKEV-LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYG 194
GR K+ +FL N EV L + S I AG + + FE M + G
Sbjct: 127 LGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENM-KLIG 185
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEA 252
+ V+ L + G + A+++ + + PD ++LI+G+C + +DE
Sbjct: 186 VSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEG 245
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+EM + V YN ++D + + + K L + K D+ +V T
Sbjct: 246 FYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDL-----SPDVVT 300
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ LI C+ + ++A+ + M G PN T+ LIK L +A + + E++++MK
Sbjct: 301 YTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMK 360
Query: 373 SAGYAIGKK-DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G +I + + C +++A VFE MK + DS +Y +L+ C
Sbjct: 361 GDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDY 420
Query: 432 DKANALFDE 440
KA LFDE
Sbjct: 421 GKAEMLFDE 429
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI + + ++++KLF M G P TF ++ L + R E+ D M
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 373 SAGYAIGKKDY-YEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
Y + Y Y L R C +++ F++M + +PD TY+ L+ C +
Sbjct: 218 KT-YGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGK 276
Query: 431 VDKANALFDEAVRNGVEVKP 450
+ A+ L + + ++ P
Sbjct: 277 IKVAHNLVNGMSKKCKDLSP 296
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 24/202 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-----KD 224
ID +R +P E+M + +K + ++ +L E G + ++ ++
Sbjct: 522 IDGFLRKDKPLLAKETLEKMLKS-SYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERN 580
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL--DCVSKLC 282
I K LL G D+A ++ +Y+ GF C+ + V LC
Sbjct: 581 IRQNINFSTKCLQLLFD----RGLQDKAFKITELIYKNGF--------CVKMDEVVQFLC 628
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
K+ EA K+LL N ++ N++I +LCK+ ++ +A L Y + + G H
Sbjct: 629 NKRRAL----EACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYELVDKGLH 684
Query: 343 PNETTFLVLIKSLYQAARVGEG 364
+ L+ +L R E
Sbjct: 685 QDLICLNDLVAALEAGGRTEEA 706
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + D S +++ L G EKL+ +E P+ +LI C DGK++EA
Sbjct: 289 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 348
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L + M G +Y+ + ++ CR+ RLD E L M +G ++
Sbjct: 349 MNLLKLMKEKGLTPDAYSYDPL---IAAFCREG---RLDVAIE-FLETMISDGCLPDIVN 401
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +++ LCK +++ A+++F ++GE GC PN +++ + +L+ + MI M
Sbjct: 402 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMV 461
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S G + Y ++ LC +++A + M++ +P TY++++ +C +R++
Sbjct: 462 SNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 521
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A + D V NG Y V
Sbjct: 522 DAIDVLDSMVGNGCRPNETTYTV 544
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 12/296 (4%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+V L + ++ R T+VL +RM R F D + +++ LC G A
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVL---DRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLA 208
Query: 219 EKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
K++ ++ P +LI+ ++G +DEA +L EM G + YN I
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTI--- 265
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ +C++ + A +++ ++E G +V ++N+L+ L + E+ KL +M
Sbjct: 266 IRGMCKEG----MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 321
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
C PN T+ +LI +L + ++ E ++ MK G Y + C R++
Sbjct: 322 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 381
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
A+ E M +DG PD Y+ ++ C + + D+A +F + G Y
Sbjct: 382 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 437
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 34/246 (13%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK----- 285
PD + LI G+C ++D+A R+ M F TV YN + + LC +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM---IGSLCSRGKLDLA 208
Query: 286 ----DPFRLDS----------------------EAEKVLLDMEYNGVPRNVETFNVLISN 319
D D+ EA K+L +M G+ ++ T+N +I
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+CK + A ++ + GC P+ ++ +L+++L + EG++++ +M S
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y +T LC +IE+AM++ + MK G PD+ +YD L+ +C R+D A +
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388
Query: 440 EAVRNG 445
+ +G
Sbjct: 389 TMISDG 394
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I R GR + F E M D G D + V+ LC+NG A D A EI
Sbjct: 371 IAAFCREGRLDVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGKA--------DQALEI 421
Query: 230 F---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
F P+ + + G A + EM G + + YN ++ C
Sbjct: 422 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISC--- 478
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LCR+ + +A ++L+DM +V T+N+++ CK R EDAI + M G
Sbjct: 479 LCREG----MVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNG 534
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
C PNETT+ VLI+ + A E E+ + +
Sbjct: 535 CRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 8/231 (3%)
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G E+ L M R G YN + +KL + R +A +V+ +E
Sbjct: 96 CRSGNYIESLHLLETMVRKG-------YNPDVILCTKLIKGFFTLRNVPKAVRVMEILEK 148
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G P +V +N LI+ CK+ R +DA ++ RM P+ T+ ++I SL ++
Sbjct: 149 FGQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 207
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+++D++ S Y + +++A+ + ++M + G PD TY+ ++
Sbjct: 208 ALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIR 267
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
C VD+A + G E Y + R L ++G+K T
Sbjct: 268 GMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 318
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 8/283 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + G + F ++ R +K + + ++ C+ S AE L +
Sbjct: 351 THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFER 410
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI G C G +A L M GF T YN I+D + K R
Sbjct: 411 MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGR 470
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ F+L + + +E +GV T+ +LIS CK A+ +M + G P
Sbjct: 471 AEEAFKLLNTGFQN--QIEADGV-----TYTILISEQCKRADMNQALVFLNKMFKVGFQP 523
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + LI + + + + +++ D + G A K+ Y + C +++ A+ F
Sbjct: 524 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFF 583
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+KM G PDS +Y L++ C +R+D+A L+D + G+
Sbjct: 584 QKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 626
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 114/303 (37%), Gaps = 44/303 (14%)
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCV 245
E MER GF D +L L++ CE + A K T + P+ +I G C
Sbjct: 269 EMMER--GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCK 326
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
G + +A L EM + G++ + ++ + K + FRL L + +
Sbjct: 327 RGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL------FLKLIRSDN 380
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
NV T+ +IS CK + A LF RM E G PN T+ LI +A +
Sbjct: 381 YKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 440
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE---------------------------- 397
E+++ M + G+ Y + LC R E
Sbjct: 441 ELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 500
Query: 398 -------QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
QA+ KM G PD Y L+ +C N + + LFDE ++ G+
Sbjct: 501 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 560
Query: 451 KEY 453
+ Y
Sbjct: 561 ETY 563
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 136/341 (39%), Gaps = 15/341 (4%)
Query: 121 LTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPT 180
L N E + F K D ++D + G ++R++
Sbjct: 164 LVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ-GLVLTTRVMNRIILVAAEM 222
Query: 181 QVLGF----FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKI 235
+++ + F+ M G D + + ++ C NG A++ + + F D+
Sbjct: 223 RLVEYAGNVFDEMSAR-GVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNAT 281
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
L+I +C ++ A ++ + G + Y+ + +S LC++ +A
Sbjct: 282 LTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSM---ISGLCKRGSV----KQAF 334
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIKS 354
++L +M NG NV T LI LCK +E A +LF ++ + PN T+ +I
Sbjct: 335 ELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISG 394
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
+ ++ + + +RMK G Y + C +A + E M +G P+
Sbjct: 395 YCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPN 454
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ TY+ ++ C R ++A L + +N +E Y +
Sbjct: 455 TCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 495
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
FERM ++ G + ++ +++ C+ G S A +L++ +NE FP+ + ++ G
Sbjct: 407 LFERM-KEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 465
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G+ +EA +L ++ E V Y + +S+ C++ D ++A L M
Sbjct: 466 CKRGRAEEAFKLLNTGFQNQIEADGVTYTIL---ISEQCKRADM----NQALVFLNKMFK 518
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G ++ + LI+ C+ +D+ KLF + + G P + T+ +I + +V
Sbjct: 519 VGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSL 578
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ +M G A Y ++ LC R+++A +++ M G +P T L
Sbjct: 579 AVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTY 638
Query: 424 KWC 426
++C
Sbjct: 639 EYC 641
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 9/282 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+ ID L L F M+ + G + + + ++ LC G S A +L+ D
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+I P+ LI + +GKL EA++L EM + + Y+ + ++ C
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL---INGFCMHD 374
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
RLD L + + P NV T+N LI CK +R E+ ++LF M + G N
Sbjct: 375 ---RLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI+ L+QA ++ +M S G Y L LC ++E+A+ VFE
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++ PD TY++++ C +V+ LF GV+
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 135/334 (40%), Gaps = 30/334 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L + ++ + +RM G + D + VV LC+ G A L+K
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+I D I +I C +++A L EM G V YN ++ C+ R
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 284 KKDPFRLDS----------------------------EAEKVLLDMEYNGVPRNVETFNV 315
D RL S EAEK+ +M + ++ T++
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI+ C R ++A +F M C PN T+ LIK +A RV EG E+ M G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + L + A +F+KM +DG PD TY +L+ C + +++KA
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+F+ ++ +E Y + + K V+ G
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 135/287 (47%), Gaps = 17/287 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
+GR D + +++ K T ++ ID V+ G+ + ++ M KR D
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-----IKRSID 357
Query: 201 ----SLRLVVEKLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+ ++ C + A+ + + + + FP+ + LIKG+C +++E L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
REM + G TV YN + + L + D A+K+ M +GVP ++ T+++
Sbjct: 418 FREMSQRGLVGNTVTYNTL---IQGLFQAGDC----DMAQKIFKKMVSDGVPPDIITYSI 470
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ LCK + E A+ +F + + P+ T+ ++I+ + +A +V +G ++ + G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y ++ C E+A ++F +MK DG P+S TY+ L+
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I +A R + + F M + G + + +++ L + G A+K+ K
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P D I +L+ G C GKL++A + + + E YN +++ + K +
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D + L + GV NV + +IS C+ E+A LF M E G P
Sbjct: 516 VEDGWDL-------FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 344 NETTFLVLIKSLYQAARVGEGD-----EMIDRMKSAGYA 377
N T+ LI+ AR+ +GD E+I M+S G+
Sbjct: 569 NSGTYNTLIR-----ARLRDGDKAASAELIKEMRSCGFV 602
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++LI +C +L A + +M + G+E V + +L+ C K R+ SEA
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN---GYCHGK---RI-SEAVA 171
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
++ M N TFN LI L ++ +A+ L RM GC P+ T+ ++ L
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ + ++ +M+ Y + LC + + A+++F +M G P+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAV 442
TY+ L+ C + R A+ L + +
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMI 317
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 90/217 (41%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ G+C ++ EA L +M+ ++ TV +N ++ + L K
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF-LHNKA----- 201
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
SEA ++ M G ++ T+ +++ LCK + A+ L +M + + +
Sbjct: 202 -SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I +L V + + M + G Y + LC R A + M
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
NP+ T+ L+ + ++ +A L+DE ++ ++
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P VE FN L+S + K+ + + I L RM + ++ +LI + +++
Sbjct: 77 LPSIVE-FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ +M GY L C +RI +A+++ ++M + P++ T++ L+
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 426 CAHNRVDKANALFDEAVRNGVE 447
HN+ +A AL D V G +
Sbjct: 196 FLHNKASEAVALIDRMVARGCQ 217
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T + I L +AG F++M D G D + ++++ LC+ G A E
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
L K +++ PD +++I+G C GK+++ L + G + + Y + +S
Sbjct: 491 LQK---SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM---ISG 544
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
CRK L EA+ + +M+ +G N T+N LI + + +L M G
Sbjct: 545 FCRKG----LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 341 CHPNETTFLVLIKSLYQA 358
+ +T ++I L+
Sbjct: 601 FVGDASTISMVINMLHDG 618
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L GR L + M + G+ S +++ LC G A ++
Sbjct: 273 TFTALVRGLFDDGRVHDALDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNS 331
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
FP+ + LI G+ G L A + +M R G + V Y ++D C+
Sbjct: 332 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD---VFCK 388
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K + S +K+LL+ P N TFN LI +LC RR A+ +F+ M GC P
Sbjct: 389 KLMFNQAKSLIDKMLLE----NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVP 444
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI L++ G+ M+ M+S G + Y ++ LC +AM
Sbjct: 445 NGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFV 504
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
KM G P++ T+ ++ +C V A
Sbjct: 505 GKMIVQGIQPNAFTFSAIIHAYCKEGEVRMA 535
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 123/294 (41%), Gaps = 23/294 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV----------VEKLCENGY 214
L + + RAG P + L F R D G R + L LC+N
Sbjct: 92 ALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPHRAAALQPPHRRAAAGRTWALCQNNR 151
Query: 215 ASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
A K++ + A + PDD ++ C +LDEA + M +YN
Sbjct: 152 VGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNA 206
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
I V LCR+ FR+ E V+ DM G+ NV T+ ++ CK A +
Sbjct: 207 I---VLALCRE---FRMQ-EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAIL 259
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
RM GC PN TF L++ L+ RV + +M M + G+A Y + LC +
Sbjct: 260 ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSV 319
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++ A S+ M+ G P+ TY L+ + + A +++++ R+G +
Sbjct: 320 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCK 373
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + + + +V+ C+ G A L + P+ L++G DG++ +A
Sbjct: 231 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 290
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ R M G+ TV+YN + + LC D A +L ME +G NV T
Sbjct: 291 LDMWRWMVAEGWAPSTVSYNIL---IRGLCSVGDL----KGASSILNSMEQHGCFPNVRT 343
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LI K AI ++ M GC PN + ++ + + +ID+M
Sbjct: 344 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 403
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ + LC R+ +A+ VF +M+ G P+ TY+ L+
Sbjct: 404 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 463
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A + E +G+E+ Y
Sbjct: 464 DALHMVTEMQSHGIELSLVTY 484
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T ++ ID +AG + + M R G K + +V+ C+ + A+ L+
Sbjct: 342 RTYSTLIDGFSKAGDLGGAISIWNDMSRS-GCKPNVVVYTNMVDVFCKKLMFNQAKSLID 400
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E P + + + LI+ C ++ A + EM R G YN + + L
Sbjct: 401 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYN---ELIHGLF 457
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R+ + +A ++ +M+ +G+ ++ T+N ++S LC+ R S +A+ +M G
Sbjct: 458 REGNC----GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 513
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN TF +I + + V M+ M Y + LC +++ AM+
Sbjct: 514 PNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 573
Query: 403 FEKMKTDGHNPDSETYDLLM 422
KM +G P++ T+++L+
Sbjct: 574 LLKMLYEGIYPNTVTWNVLV 593
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 12/288 (4%)
Query: 170 IDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTAN 227
+D L ++G + GFF E + R + D S + ++ CENG S E L +
Sbjct: 80 LDLLAKSGNLDRTWGFFTEYLGRT---QFDVYSFGITIKAFCENGNVSKGFELLAQMETM 136
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ P+ I +LI+ C +G +D+AK + M G Y +++ K KKD
Sbjct: 137 GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDG 196
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
F L + M+ GV N+ T+N LI+ C+ + A K+F + + G N T
Sbjct: 197 FELYQK-------MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +LI L + +V + + +++RMK A + + + LC ++++A+S EK+K
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G P TY++L++ + + L E G+ Y +
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTI 357
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 140/347 (40%), Gaps = 29/347 (8%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRK----DFKAIHDFLVDNKEVL-GPKTLAS--- 168
FN+ L A + D T FFT+Y GR + F +N V G + LA
Sbjct: 76 FNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMET 135
Query: 169 ------------CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
I+ R G Q F RM+ D G ++ +++ + GY
Sbjct: 136 MGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD-DLGLAANQYIYTIMINGFFKKGYKK 194
Query: 217 YAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
+L K + P+ + LI +C DGKL A ++ E+ + G V YN +
Sbjct: 195 DGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNIL- 253
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ LCRK S+AE +L M+ + TFN+L+ LC + + A+ +
Sbjct: 254 --IGGLCRKGQV----SKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEK 307
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
+ G P T+ +LI + E++ M+ G + K Y + +
Sbjct: 308 LKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDD 367
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
IE+A +F MK G PD TY +L+ C + +A+ L+ V
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMV 414
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 139/343 (40%), Gaps = 30/343 (8%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ K HD L+ L + A+ I+ + + G + +++ K + +
Sbjct: 143 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLT-KPNVEM 201
Query: 202 LRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ LC+ S A L + T I D LI G+C++GKL EA L EM
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 261 RGGFELGTVAYNCILDCVSK----------------LCRKKDPFRLDS------------ 292
YN ++D + K C K D +
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A+ V M GV +V T+ +LI+ CK + ++A+ LF M + P T+ LI
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L ++ R+ ++ID M+ G Y + LC +++A+++F KMK
Sbjct: 382 DGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIR 441
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P+ T+ +L+ C R+ A +F + + G + Y V
Sbjct: 442 PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 36/303 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+D + + + R+E G + D +L +++ C G ++ ++
Sbjct: 66 LDSFAKMKHYSTAVSLSHRLELK-GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS--------- 279
+P D + + LIKG C+ G++ +A ++ GF+L V+Y +++ V
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 184
Query: 280 KLCRKKD-------------------PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
KL RK D ++L SEA + +M G+ +V T++ LI
Sbjct: 185 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C + ++AI L M +PN T+ +L+ +L + +V E ++ M A K
Sbjct: 245 CIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV---K 301
Query: 381 KDYYEFLTRLCG---IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
D + T + G + +++A VF M G PD TY +L+ +C + VD+A L
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 438 FDE 440
F E
Sbjct: 362 FKE 364
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK-KDP 287
+ PD +LI G+C + +DEA L +EM++ G V Y+ ++D LC+ + P
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID---GLCKSGRIP 391
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ D ++ +M G P +V T++ LI LCK + AI LF +M + PN T
Sbjct: 392 YVWD-----LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F +L+ L + R+ + E+ + + GY + Y + C +E+A+++ KM+
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+G P++ T++ ++ + DKA L + + G+
Sbjct: 507 DNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
FK +H V G T +S ID L ++GR V + M RD G D + ++
Sbjct: 362 FKEMHQ----KNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM-RDRGQPADVITYSSLI 416
Query: 207 EKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LC+NG+ A L + EI P+ +L+ G C G+L +A+ + +++ G+
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
L YN + ++ C++ L EA +L ME NG N TF +I L K
Sbjct: 477 LNVYTYNVM---INGHCKQG----LLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529
Query: 326 SEDAIKLFYRMGEWG 340
++ A KL +M G
Sbjct: 530 NDKAEKLLRQMIARG 544
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 7/185 (3%)
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ +N ILD +K+ L +E G+ ++ T N+LI+ C + +
Sbjct: 60 IQFNKILDSFAKMKHYSTAVSLSHR-------LELKGIQPDLITLNILINCFCHMGQITF 112
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+ ++ + G P+ T LIK L +V + D++ + G+ + + Y +
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+C I A+ + K+ P+ E Y ++ C + V +A LF E G+
Sbjct: 173 GVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232
Query: 449 KPKEY 453
Y
Sbjct: 233 DVVTY 237
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 13/222 (5%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L+ + G + + N +++C + + F VL + G P +
Sbjct: 78 AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF-------SVLAKILKRGYPPDTV 130
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T N LI LC + + A+ ++ G N+ ++ LI + ++G+ I +
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV---CKIGDTRGAIKLL 187
Query: 372 KSAGYAIGKKD---YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ + K + Y + LC + + +A +F +M G + D TY L+ +C
Sbjct: 188 RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIE 247
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
++ +A L +E V + Y + L K VK+ K
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + GR T+ F+ M R G D + R ++ G L+
Sbjct: 227 TYSLLIDYYCKIGRCTEARNIFDSMVRR-GQNPDAYTYRTLLHGYATKGALVDMHDLLAL 285
Query: 225 TANEIFP-DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P +D + ++LI+ + + LD+A EM + GF V Y ++D + K R
Sbjct: 286 MIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGR 345
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D S+ M G+ ++ TF LI LC I + KL + M G HP
Sbjct: 346 VEDAVSHFSQ-------MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHP 398
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ SL + RV E + D++ G Y + C ++++++ +
Sbjct: 399 NAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLL 458
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M + G PD+ TY L+ +C + RVD A AL+ E V+ Y +
Sbjct: 459 GRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNI 510
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 141/305 (46%), Gaps = 17/305 (5%)
Query: 148 KAIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
KA+ F+ ++ P T + ID L +AGR + F +M + G D + +
Sbjct: 313 KAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSE-GLSPDIITFTSL 371
Query: 206 VEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LC G EKL + N I P+ + ++ C +G++ EA ++ G
Sbjct: 372 IHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGV 431
Query: 265 ELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGV-PRNVETFNVLISNLC 321
+ V+Y ++D C+ ++D E+ K+L M G+ P NV T++ L++ C
Sbjct: 432 KPDVVSYTILIDGYCLDG--------KMD-ESIKLLGRMVSIGLRPDNV-TYSALLNGYC 481
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K R +DA+ L+ M PN T+ +++ L+ A RV E ++ +G +G
Sbjct: 482 KNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGIN 541
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y L LC +++A+ +F+ +++ + T+++++ R+ A +LF
Sbjct: 542 TYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAI 601
Query: 442 VRNGV 446
+ +G+
Sbjct: 602 LPSGL 606
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK----------LCRKKD 286
+++I G +G++D+A L EM GF V YN ++D + K L + D
Sbjct: 143 NMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFD 202
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+L+ EA ++L M G+ +V T+++LI CKI R +A +F M G +P+
Sbjct: 203 KGQLE-EAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAY 261
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ L+ + + +++ M G + + + E +++AM+ F +M
Sbjct: 262 TYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEM 321
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ G +P+ TY ++ C RV+ A + F + V G+
Sbjct: 322 RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGL 361
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 120/294 (40%), Gaps = 44/294 (14%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KD 224
L + +D L + GR + FF+++ G K D S ++++ C +G + KL+ +
Sbjct: 403 LNTIMDSLCKEGRVLEAHDFFDQIIH-VGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR----------------------- 261
+ + PD+ L+ G+C +G++D+A L REM+
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521
Query: 262 ------------GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
G +LG YN +L LC EA ++ +
Sbjct: 522 VAAREFYMKIVDSGIQLGINTYNIVL---GGLCENS----FVDEALRMFQGLRSKEFQLE 574
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V TFN++I L K+ R DA LF + G P+ + ++I+S + + E DE+
Sbjct: 575 VRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFL 634
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
M+ G + + +L + +A + K+ ++ ++ T LL++
Sbjct: 635 SMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLIS 688
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A ++ D YN P NV ++N++I+ L K + A LF+ M G PN T+ +I
Sbjct: 124 AVHMMADDGYN-CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVID 182
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L +A + + + ++ +M G ++E+A+ + +KM G P
Sbjct: 183 GLCKAQAMDKAEAVLQQMFDKG-------------------QLEEAVRLLKKMSGGGLQP 223
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
D TY LL+ +C R +A +FD VR G YR
Sbjct: 224 DVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYR 264
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF D+ + ++ LC G A +L + A ++ PD + + L+KG C G + A
Sbjct: 249 GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 308
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ EM G YN + ++ LC+ + S+A V+ D G +V T
Sbjct: 309 LQVMNEMVEDGCHPDIWTYNIV---INGLCKMGNI----SDAAVVMNDAIVKGYLPDVFT 361
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN +I CK + + A++L RM +G P+ T+ ++ L +A + E +E + M
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + C I ++E+A V +M DG PD+ +++ L+ +C + +D
Sbjct: 422 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A LF + G + +
Sbjct: 482 GAYLLFQKLDEKGYSATADTFNI 504
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 134/293 (45%), Gaps = 11/293 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T S I+ L G + L F E +D K D +V+ LC G +A +++
Sbjct: 256 TYCSLINGLCAEGDVERALELFNEAQAKD--LKPDLVVYNSLVKGLCRQGLILHALQVMN 313
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + PD +++I G C G + +A + + G+ +N ++D C
Sbjct: 314 EMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMID---GYC 370
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++ +LDS A +++ M G+ + T+N +++ LCK ++++ + F M GC
Sbjct: 371 KR---LKLDS-ALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 426
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ +LI++ + ++ E +I RM G + + C ++ A +
Sbjct: 427 PNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLL 486
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
F+K+ G++ ++T+++L+ + + + A +F E + G + YRV
Sbjct: 487 FQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRV 539
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 120/300 (40%), Gaps = 48/300 (16%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G +K + + + LCE G A LV+ I PD + L++G C D K+ EA
Sbjct: 145 GMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAA 204
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ R M G YN I+D C K+D + EA ++L D + G + T+
Sbjct: 205 QYLRRMMNQGCIPDDFTYNTIID---GYC-KRDMLQ---EATELLKDAIFKGFVPDRVTY 257
Query: 314 NVLISNLCKIRRSEDAIKLF-----------------------------------YRMGE 338
LI+ LC E A++LF M E
Sbjct: 258 CSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE 317
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL---CGIER 395
GCHP+ T+ ++I L + + + +++ GY D + F T + C +
Sbjct: 318 DGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL---PDVFTFNTMIDGYCKRLK 374
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ A+ + E+M G PD+ TY+ ++ C + + N F+E + G Y +
Sbjct: 375 LDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 126/327 (38%), Gaps = 32/327 (9%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-A 226
S + L R G L M D G D + +V+ LC+ G S A ++ D
Sbjct: 294 SLVKGLCRQGLILHALQVMNEMVED-GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIV 352
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
PD + +I G+C KLD A +L M+ G + YN +L+ + K + K+
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412
Query: 287 --------------PFRLD--------------SEAEKVLLDMEYNGVPRNVETFNVLIS 318
P + EA V++ M +G+ + +FN LI
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C+ + A LF ++ E G TF +LI + + +++ M S GY
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A +M + G P T+ ++ ++RV +A A+
Sbjct: 533 DLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAII 592
Query: 439 DEAVRNGV--EVKPKEYRVDPRYLKKP 463
VR GV EV D + + P
Sbjct: 593 HIMVRMGVVPEVVDTILSTDKKEIAAP 619
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 38/270 (14%)
Query: 205 VVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ L Y A K+ V+ + + PD + + IK +C+ G+ A RL R + G
Sbjct: 16 IMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERG 75
Query: 264 FELGTVAYNCIL--------------------------------DCVSKLCRKKDPFRLD 291
++ +AY ++ + + LC+K D
Sbjct: 76 CDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESG 135
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ KVL G+ N T N+ I LC+ R E+A+ L M + P+ T+ L
Sbjct: 136 ALLAKVL----KRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTL 190
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
++ L + ++V E + + RM + G Y + C + +++A + + G
Sbjct: 191 MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGF 250
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEA 441
PD TY L+ CA V++A LF+EA
Sbjct: 251 VPDRVTYCSLINGLCAEGDVERALELFNEA 280
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 9/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV L +G+ A L + ++FPD + ++ C G + E+ L ++ + G
Sbjct: 86 VVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRG 145
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ N + LC RL+ EA ++ M+ P +V T+N L+ LCK
Sbjct: 146 MSVNKFTCNIW---IRGLCEGG---RLE-EAVALVESMDAYIAP-DVVTYNTLMRGLCKD 197
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ ++A + RM GC P++ T+ +I + + E E++ G+ + Y
Sbjct: 198 SKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTY 257
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC +E+A+ +F + + PD Y+ L+ C + A + +E V
Sbjct: 258 CSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE 317
Query: 444 NGVEVKPKEYRV 455
+G Y +
Sbjct: 318 DGCHPDIWTYNI 329
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 111/285 (38%), Gaps = 12/285 (4%)
Query: 164 KTLASC--IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
K LA C + L G F+ M R F D + V+ LC+ G + L
Sbjct: 79 KPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFP-DVATFNNVLHALCQKGDIMESGAL 137
Query: 222 VKDTANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ +K C++ I+G C G+L+EA L M V YN ++
Sbjct: 138 LAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLM---RG 193
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+ EA + L M G + T+N +I CK ++A +L G
Sbjct: 194 LCKDSKV----QEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKG 249
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ T+ LI L V E+ + ++ Y + LC I A+
Sbjct: 250 FVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 309
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
V +M DG +PD TY++++ C + A + ++A+ G
Sbjct: 310 QVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKG 354
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 17/255 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + + L ERM YG D + V+ LC+ G A K V +
Sbjct: 361 TFNTMIDGYCKRLKLDSALQLVERMWM-YGIAPDAITYNSVLNGLCKAGKA----KEVNE 415
Query: 225 TANEIF-----PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
T E+ P+ ++LI+ +C +L+EA + M + G T+++N + +
Sbjct: 416 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTL---IH 472
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
CR D LD A + ++ G +TFN+LI + A K+F M
Sbjct: 473 GFCRNGD---LDG-AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK 528
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ T+ VL+ +AA V + M S G+ + L L R+ +A
Sbjct: 529 GYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEA 588
Query: 400 MSVFEKMKTDGHNPD 414
+++ M G P+
Sbjct: 589 VAIIHIMVRMGVVPE 603
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 45/201 (22%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
AYN I+D + +A KV + M GV + T V I + C R A
Sbjct: 12 AYNAIMDALVNTAYH-------DQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 330 IKLFYRMGEWGC-----------------------------------HPNETTFLVLIKS 354
++L + E GC P+ TF ++ +
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NP 413
L Q + E ++ ++ G ++ K ++ LC R+E+A+++ E M D + P
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM--DAYIAP 182
Query: 414 DSETYDLLMTKWCAHNRVDKA 434
D TY+ LM C ++V +A
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEA 203
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 141/348 (40%), Gaps = 47/348 (13%)
Query: 139 DYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGF 195
+ + + ++F LV+ +E L T I L R+G + GF + ME DYG
Sbjct: 230 EAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME-DYGL 288
Query: 196 KRDKDSLRLVVEKLCEN-----------------------------------GYASYAEK 220
D + ++ LC++ G A A K
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348
Query: 221 LVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++K+ A + P+ D L++G C G++D A L ++M R T+ YN I++
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+ KKD FRL SE ME G+ NV T++++I LC+ E A L M
Sbjct: 409 RHHSKKDAFRLLSE-------MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G PN + LI + V E+ D+M Y + L + R+E++
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 521
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
F +M+ G P+ TY L+ + + ++ A L + G++
Sbjct: 522 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 569
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 7/216 (3%)
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
++ +C + D AK++ EM G L TV YN + ++ LCR EA
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVL---IAGLCRSGAV----EEAFGFKK 281
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
DME G+ + T+ LI+ LCK RRS +A L M PN + LI +
Sbjct: 282 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG 341
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
E +MI M +AG K Y + LC + ++++A + ++M D H PD+ TY+
Sbjct: 342 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 401
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
L++ H+ A L E G+ Y +
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSI 437
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 10/264 (3%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKL 249
R+ G + + +++ LC +G A KD + + PD LI G C +
Sbjct: 249 RERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS 308
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
+EAK L EM + V Y ++D R+ + EA K++ +M GV N
Sbjct: 309 NEAKALLDEMSCAELKPNVVVYANLID---GFMREGNA----DEAFKMIKEMVAAGVQPN 361
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
T++ L+ LCK+ + + A L +M P+ T+ ++I+ ++ + ++
Sbjct: 362 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 421
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M++AG + Y + LC E+A + E+M T G P++ Y L++ +C
Sbjct: 422 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 481
Query: 430 RVDKANALFDEAVRNGVEVKPKEY 453
V A +FD+ + V V P Y
Sbjct: 482 NVSLACEIFDKMTK--VNVLPDLY 503
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 21/312 (6%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK---D 224
S I L + GR + +F +M+ + G ++ + ++ +NG AE+LV+ D
Sbjct: 507 SLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 565
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
T + P+D I L++ + +++ + M G L Y ++ +S
Sbjct: 566 TG--LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 623
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ FR VL +E NG +V ++ LIS LCK E A + M + G PN
Sbjct: 624 EAAFR-------VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 676
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ LI L ++ + + + + + G Y + C + I A ++
Sbjct: 677 IVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYN 736
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA-VRNGVEVKPKEYRVDPRYLKKP 463
+M G PD+ Y +L T + +++A L +E +R + VD
Sbjct: 737 EMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGF----- 791
Query: 464 IAVKKGKKRETL 475
K+GK +ETL
Sbjct: 792 --CKRGKMQETL 801
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 80/208 (38%), Gaps = 10/208 (4%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
N V +S I L + + G + M + G + +++ LC++G S
Sbjct: 636 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK-GVDPNIVCYNALIDGLCKSGDIS 694
Query: 217 YAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
YA + A + P+ LI G C G + A L EM G Y+ +
Sbjct: 695 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
S D E L++ + ++ +FN L+ CK + ++ +KL +
Sbjct: 755 TGCSSAG--------DLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHV 806
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGE 363
+ G PN T +I L +A ++ E
Sbjct: 807 IMGRGLVPNALTIENIISGLSEAGKLSE 834
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 154/400 (38%), Gaps = 35/400 (8%)
Query: 64 ARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAI--LGFNHWL 121
ARSLS LL A P P++ + + H P L L P A+ + L
Sbjct: 45 ARSLSASLLAVAPALPTPVANSVLKLLWHHGPRALLFFHALLHLPARAHAVSPCTIDLAL 104
Query: 122 TQNANFSHTDETLSFFTDYFGR-RKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGR-P 179
+A H + + F R R F P+T +R + R P
Sbjct: 105 DLSARLRHPRQLTNSILALFPRLRLPFT--------------PRTFPILFERFAASQRRP 150
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL 239
+ F + R + +D +++ L ++ +AS A LV+ PD + L
Sbjct: 151 DIAVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASKAASLVRALERRFPPDVVTYNTL 210
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS--EAEKV 297
GWC A L R+M G YN IL K FR A
Sbjct: 211 ADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVIL---------KGFFRAGQLQHAWNF 261
Query: 298 LLDMEYNG-----VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
L M+ G +V ++ +I L + + A KLF M + GC P T+ LI
Sbjct: 262 FLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALI 321
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ + + V + + D M Y Y + LC + +I++AM + E+MK +G
Sbjct: 322 QVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCE 381
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
P +TY++L+ +DKA LF E + G E P +
Sbjct: 382 PVVQTYNVLIRYSFEEGEMDKALHLF-ERMSKGEECLPNQ 420
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +I G V G+LD+A++L EM + G YN ++ + C+K +
Sbjct: 277 PDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVI---CKKGNV--- 330
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A V DM NV T+ VLI LC + + + A+KL RM GC P T+ V
Sbjct: 331 -EDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNV 389
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
LI+ ++ + + + +RM + +D Y + + + + M++ +M
Sbjct: 390 LIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARM 445
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 9/285 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I GR L M G ++ + V+ C+ G A K+ +
Sbjct: 521 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 580
Query: 225 --TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
T E+ P+ + + LI G+C GKLD A M G + YN ++ +
Sbjct: 581 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 640
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R +EA +++ +M G+ +V T+N+LI+ CK + A+++F M G
Sbjct: 641 RG-------TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 693
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
T+ LI +L + +V E D++ D G Y + I++A +
Sbjct: 694 ATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 753
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+M+ PD TY+ LM C RVD+A L DE G++
Sbjct: 754 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 798
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 12/248 (4%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+ +++ LC G + A +L++ P+ + +I G+C G++ A + REM
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPR---PNAVTYNTVIAGFCSRGRVQAALDIMREMR 546
Query: 261 -RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLIS 318
RGG Y + +S C+ R+D EA KV +M G V +N LI
Sbjct: 547 ERGGIAPNQYTYGTV---ISGWCKVG---RVD-EAVKVFDEMLTKGEVKPEAVMYNALIG 599
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + + A+ RM E G T+ +L+ +L+ R E E+++ M G A
Sbjct: 600 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 659
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A+ +FE M G TY L+ +V + + LF
Sbjct: 660 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 719
Query: 439 DEAVRNGV 446
DEAVR G+
Sbjct: 720 DEAVRRGI 727
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 177 GRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
G+ L + +RM ER G + L+V L +G + A +LV++ + + PD
Sbjct: 605 GKLDTALLYRDRMVER--GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 662
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
++LI G C +G + +A + M R G V Y ++ +SK + ++ +L EA
Sbjct: 663 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 722
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+ G+ ++ +N LI++ + A ++ M + P++ T+ L++
Sbjct: 723 VR-------RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 775
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L RV E ++ID M G Y ++ ++ A+ + +M G NP
Sbjct: 776 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 835
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
TY+ L+ C + + D A + E V NG+
Sbjct: 836 LLTYNALIQGLCKNGQGDDAENMVKEMVENGI 867
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 16/239 (6%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++++ C GK A L R+M R V YN + ++ C + R+ + +
Sbjct: 492 NIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTV---IAGFCSRG---RVQAALDI 541
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKSL 355
+ E G+ N T+ +IS CK+ R ++A+K+F M G P + LI
Sbjct: 542 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 601
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ DRM G A+ Y + L R +A + E+M G PD
Sbjct: 602 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 661
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
TY++L+ C V KA +F+ R GV Y L KKG+ +ET
Sbjct: 662 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS-----KKGQVQET 715
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P TFN+++ +LC + A++L +M PN T+ +I RV
Sbjct: 484 LPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAAL 539
Query: 366 EMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMT 423
+++ M+ G A + Y ++ C + R+++A+ VF++M T G P++ Y+ L+
Sbjct: 540 DIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 599
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++D A D V GV + Y +
Sbjct: 600 GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 631
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 24/257 (9%)
Query: 150 IHDFLVDNK--------EVLGPKTLAS-------CIDRLVRAGRPTQVLGFFERMERDYG 194
+H +D + E +G K LA I+ + G + L FE M R G
Sbjct: 633 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR-RG 691
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAK 253
+ + ++ L + G +KL + I PD + + LI G +D A
Sbjct: 692 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 751
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ EM + V YN ++ + L R EA K++ +M G+ ++ T+
Sbjct: 752 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV-------DEARKLIDEMTERGIQPDLVTY 804
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LIS +DA+++ M G +P T+ LI+ L + + + + M+ M
Sbjct: 805 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 864
Query: 374 AGYAIGKKDYYEFLTRL 390
G Y + L
Sbjct: 865 NGITPDDSTYISLIEGL 881
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 8/253 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD-KICDLLIKGWCVDGKLDEA 252
G + + +++ LC G A +LV + D K +LI G C GK EA
Sbjct: 141 GLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEA 200
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
R+M + V Y+ ++D LC+ L SEA + L+M G+ N+ T
Sbjct: 201 VGWLRKMEERNWNPNVVVYSTVMD---GLCKDG----LVSEALGLCLEMSGKGIKPNLVT 253
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ LI LC R ++A L M + G P+ + +L+ L + ++ + +I M
Sbjct: 254 YTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMI 313
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + R C ++++A VFE M + G PD Y L+ WC ++
Sbjct: 314 LVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNIN 373
Query: 433 KANALFDEAVRNG 445
KA L DE ++ G
Sbjct: 374 KAMHLLDEMIKVG 386
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 148/371 (39%), Gaps = 26/371 (7%)
Query: 77 ADPLPISQRLHL-IFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLS 135
P P S LH+ + SH T + ++ + S + L F ++ DE L+
Sbjct: 5 TSPFP-SPALHIPLHSHCTKSTNINHEIQSHSNKT--QFLNFMRNQCKSGKLKSIDEALN 61
Query: 136 FFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGF 195
FF + ++ DF + +LG +V+ T + + M G
Sbjct: 62 FF-HTMAKMNPLPSVIDFTL----LLG---------FIVKMKHYTTAISLVKEMHSSLGI 107
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKR 254
K D L +V+ LC ++ ++ + P +LI G CV G + A
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L + + G+ Y +++ + K+ + SEA L ME NV ++
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKT-------SEAVGWLRKMEERNWNPNVVVYS 220
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
++ LCK +A+ L M G PN T+ LI+ L R E ++D M
Sbjct: 221 TVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKM 280
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G + + LC +I QA SV M G PD TY+ L+ ++C N++D+A
Sbjct: 281 GVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEA 340
Query: 435 NALFDEAVRNG 445
+F+ V G
Sbjct: 341 TRVFELMVSRG 351
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 122/293 (41%), Gaps = 11/293 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T I L GR + + M + G D SL ++V+ LC+ G A+ ++
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMK-MGVMPDLQSLNILVDVLCKEGKIMQAKSVIGF 311
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
E+ PD + LI +C+ ++DEA R+ M G VAY + + C
Sbjct: 312 MILVGEV-PDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSL---IHGWC 367
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ K+ ++A +L +M G +V T+ LI C++ R A +LF M ++G
Sbjct: 368 KIKNI----NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQV 423
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T +++ L ++ + E + M+ + + Y L +C ++ A+ +
Sbjct: 424 PNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALEL 483
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
F + G + Y +++ + +DKA L NG Y V
Sbjct: 484 FSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNV 536
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 137/335 (40%), Gaps = 34/335 (10%)
Query: 154 LVDNKEVLG----PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD+ E G KT I+ L + G+ ++ +G+ +ME + + + V++ L
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKME-ERNWNPNVVVYSTVMDGL 226
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C++G S A L + + + I P+ LI+G C G+ EA L EM + G
Sbjct: 227 CKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDL 286
Query: 269 VAYNCILDCV---SKLCRKK-------------DPFRLDS------------EAEKVLLD 300
+ N ++D + K+ + K D F +S EA +V
Sbjct: 287 QSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFEL 346
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G ++ + LI CKI+ A+ L M + G P+ T+ LI Q R
Sbjct: 347 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 406
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E+ M G + L LC + + +A+S+F M+ + + Y +
Sbjct: 407 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSI 466
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ C+ +++ A LF G+++ Y +
Sbjct: 467 ILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTI 501
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 128/298 (42%), Gaps = 15/298 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQ---VLGFFERMERDYGFKR 197
FGR K+ ++ D ++ + ++L +D L + G+ Q V+GF + G
Sbjct: 264 FGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILV----GEVP 319
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++++ C A ++ + + PD LI GWC +++A L
Sbjct: 320 DVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLL 379
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
EM + GF V + + + C+ P A+++ L+M G N++T ++
Sbjct: 380 DEMIKVGFTPDVVTWTTL---IGGFCQVGRPL----AAKELFLNMHKYGQVPNLQTCAII 432
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ LCK + +A+ LF+ M + N + +++ + A ++ E+ + + G
Sbjct: 433 LDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGL 492
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
I Y + +++A + M+ +G PDS TY++ + A + ++
Sbjct: 493 QINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARS 550
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 9/207 (4%)
Query: 244 CVDGKL---DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
C GKL DEA M + + + +L + K+ L E L
Sbjct: 48 CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSL-- 105
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
G+ + NV+I++LC ++ + M + G P+ TF +LI L
Sbjct: 106 ----GIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGD 161
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
VG E++D ++ GY K Y + LC + + +A+ KM+ NP+ Y
Sbjct: 162 VGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYST 221
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
+M C V +A L E G++
Sbjct: 222 VMDGLCKDGLVSEALGLCLEMSGKGIK 248
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 121/295 (41%), Gaps = 12/295 (4%)
Query: 132 ETLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFER 188
++L+ D G+ K++ F++ EV T S IDR + + FE
Sbjct: 287 QSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFEL 346
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDG 247
M G D + ++ C+ + A L+ + F PD LI G+C G
Sbjct: 347 M-VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVG 405
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
+ AK L M++ G ILD LC+ +L SEA + ME + +
Sbjct: 406 RPLAAKELFLNMHKYGQVPNLQTCAIILD---GLCKS----QLLSEALSLFHAMEKSNLD 458
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N+ +++++ +C + A++LF + G N + ++I + + + +++
Sbjct: 459 LNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDL 518
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ M+ G Y F+ L I +++ M+ G + D+ T ++++
Sbjct: 519 LSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 573
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 252 AKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
A L +EM+ G + T N + ++ LC +L + VL M G+ +V
Sbjct: 94 AISLVKEMHSSLGIKPDTFILNVV---INSLCH----LKLVAFGFSVLGTMLKLGLEPSV 146
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
TF +LI+ LC A++L + + G + T+ VLI L + + E + +
Sbjct: 147 VTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRK 206
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ + Y + LC + +A+ + +M G P+ TY L+ C R
Sbjct: 207 MEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGR 266
Query: 431 VDKANALFDEAVRNGV 446
+A +L DE ++ GV
Sbjct: 267 WKEAGSLLDEMMKMGV 282
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 9/192 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I + GRP F M + YG + + ++++ LC++ S A L
Sbjct: 393 TWTTLIGGFCQVGRPLAAKELFLNMHK-YGQVPNLQTCAIILDGLCKSQLLSEALSLFHA 451
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + + I +++ G C GKL+ A L + G ++ AY +++ +K
Sbjct: 452 MEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQ-- 509
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
L +AE +L +ME NG + T+NV + L R +IK M + G
Sbjct: 510 -----GLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSV 564
Query: 344 NETTFLVLIKSL 355
+ TT ++I L
Sbjct: 565 DATTTEMIINYL 576
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 120/298 (40%), Gaps = 11/298 (3%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWC 244
R +G D +L +V+ LC +A L K PD LI+G C
Sbjct: 92 LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 151
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
V+GK+ EA L +M GF+ V Y + ++ LC+ + S A ++L ME
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTL---INGLCKVGNT----SAAIRLLRSMEQG 204
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
NV F+ LI +LCK R+ +A +F M G PN T+ LI L +
Sbjct: 205 NCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 264
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+++ M + + LC + +A V + M G P+ TY+ LM
Sbjct: 265 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 324
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARK 482
C N VD A +FD V Y + ++ K L E+M+R+
Sbjct: 325 HCLRNEVDVAVKVFDTMVHKDCVANVISYNT---LINGYCKIQSVDKAMYLFEEMSRQ 379
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 124/303 (40%), Gaps = 30/303 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L G+ + L F++M + GF+ + + ++ LC+ G S A +L++
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ + LI C D ++ EA + EM G V YN ++ + KLC
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260
Query: 284 KK----------------DPFRLDS------------EAEKVLLDMEYNGVPRNVETFNV 315
K D F L++ EA V+ M + GV NV T+N
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ C + A+K+F M C N ++ LI + V + + + M
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC + R++ A+S+F +M G PD TY L C + +DKA
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 440
Query: 436 ALF 438
AL
Sbjct: 441 ALL 443
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 12/286 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D +L VV+ LC+ G + A +V + + P+ + L+ G C+ ++D A ++
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M ++YN +++ K+ L E M + N T+N L
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE-------MSRQELTPNTVTYNTL 391
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I LC + R +DAI LF+ M G P+ T+ L L + + + ++ ++ + +
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y L +C +E A +F + + G P+ TY++++ C + +A+
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511
Query: 437 LFDEAVRNGVEVKPKEYRVDPR-YLKKPIAVKKGKKRETLPEKMAR 481
LF E +NG Y + R +L+ A+ + E L E +AR
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEAL---RTIELLEEMLAR 554
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 7/198 (3%)
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
LDEA M TV +N +L ++K L + M+ G+P
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ-------MDSFGIPP 103
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T ++I++LC + R + A ++ + G P+ TTF LI+ L ++GE +
Sbjct: 104 DVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF 163
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
D+M G+ Y + LC + A+ + M+ P+ + L+ C
Sbjct: 164 DKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223
Query: 429 NRVDKANALFDEAVRNGV 446
+V +A +F E + G+
Sbjct: 224 RQVTEAFNIFSEMITKGI 241
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 124/305 (40%), Gaps = 9/305 (2%)
Query: 145 KDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
K + + +VD+K + TL + +D L + G + + M G + + +
Sbjct: 262 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH-RGVEPNVVTYNA 320
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C A K+ ++ + I + LI G+C +D+A L EM R
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
TV YN ++ + + R +D L E M G ++ T+ L LCK
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHE-------MVARGQIPDLVTYRTLSDYLCKN 433
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R + A+ L + P+ + ++ + +A + + ++ + S G Y
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC + +A +F +M +G +P+ TY+L+ + +N + L +E +
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553
Query: 444 NGVEV 448
G V
Sbjct: 554 RGFSV 558
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 148 KAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
KA++ F +++ L P T+ + I L GR + F M G D + R +
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA-RGQIPDLVTYRTL 426
Query: 206 VEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LC+N + A L+K + PD +I ++ G C G+L++A+ L + G
Sbjct: 427 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 486
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ YN + + LC++ L +EA K+ +M NG N T+N++ +
Sbjct: 487 QPNVWTYNIM---IHGLCKQG----LLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+ I+L M G + +T +L+ L
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGML 570
>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
Length = 584
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 12/279 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
AS ID L ++ R E M RD G D + +++ C+N A ++ ++
Sbjct: 97 AFASLIDALSKSTRLADAARALELM-RDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQE 155
Query: 225 T--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM-YRGGFELGTVAYNCILDCVSKL 281
+N PD + +LI G+C + ++D A L REM + V YN I+D L
Sbjct: 156 MIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVD---GL 212
Query: 282 CRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
CR EA K L + M G V T+ LI CK ++ + A++++ M E
Sbjct: 213 CRSNRFL----EAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERK 268
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P ++ V+I L +A RV + ++ M++ G + Y + LC ++ A
Sbjct: 269 IQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAY 328
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+++ MK G P+ TY L+ +C ++R + A LFD
Sbjct: 329 ALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFD 367
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI+G C K+ A R+ M + V+Y+ I+D +SK R D +R V+
Sbjct: 244 LIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYR-------VV 296
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ME G NV + LI LCK +DA L+ M G PN+ T+ LI + +
Sbjct: 297 REMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRN 356
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R + D ++ + Y ++ LC R++ A ++F +M+ G + D+ Y
Sbjct: 357 DRTETALGLFDHIRDY-CPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAY 415
Query: 419 DLLMTKWCAHNRVDKANALFDE 440
++L+ R ++A + +E
Sbjct: 416 NVLLHGAFRSERPEEAFRILEE 437
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G C G LD+A L R M R G Y ++D CR +E L
Sbjct: 314 LIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLID---TFCRNDR-----TETALGL 365
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
D + P +V + ++S LC+ RR +DA LF M G + + VL+ +++
Sbjct: 366 FDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRS 425
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R E +++ + + Y + C +E M +F +M+ G PD TY
Sbjct: 426 ERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC---LESGMVLFYEMRQRGIAPDFATY 482
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
L+ + + +A L +E + +G+
Sbjct: 483 SALIDRLLGSGEIGRAFDLCEEMLASGL 510
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 10/199 (5%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G + A R RE G + ++D + C+ D A +L M ++G
Sbjct: 38 GDANAAARFLREKTAAGSIFPGFLSSVVID---RACKSGDL----RGALLILATMLHSGT 90
Query: 307 PR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
P N F LI L K R DA + M + G HP+ TF V+I+ + +
Sbjct: 91 PPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAW 150
Query: 366 EMIDRMKSAGYAIGKKDYYEFLT-RLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMT 423
E+ M + Y L C R+++A+ + +M+ + PD Y+ ++
Sbjct: 151 EIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVD 210
Query: 424 KWCAHNRVDKANALFDEAV 442
C NR +A DE +
Sbjct: 211 GLCRSNRFLEAWKFLDETM 229
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 9/282 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+ ID L L F M+ + G + + + ++ LC G S A +L+ D
Sbjct: 243 TTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301
Query: 227 N-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+I P+ LI + +GKL EA++L EM + + Y+ + ++ C
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL---INGFCMHD 358
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
RLD L + + P NV T+N LI CK +R E+ ++LF M + G N
Sbjct: 359 ---RLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 414
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI+ L+QA ++ +M S G Y L LC ++E+A+ VFE
Sbjct: 415 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 474
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++ PD TY++++ C +V+ LF GV+
Sbjct: 475 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 516
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 135/334 (40%), Gaps = 30/334 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L + ++ + +RM G + D + VV LC+ G A L+K
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 229
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+I D I +I C +++A L EM G V YN ++ C+ R
Sbjct: 230 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 289
Query: 284 KKDPFRLDS----------------------------EAEKVLLDMEYNGVPRNVETFNV 315
D RL S EAEK+ +M + ++ T++
Sbjct: 290 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 349
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI+ C R ++A +F M C PN T+ LIK +A RV EG E+ M G
Sbjct: 350 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 409
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + L + A +F+KM +DG PD TY +L+ C + +++KA
Sbjct: 410 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 469
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+F+ ++ +E Y + + K V+ G
Sbjct: 470 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 503
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 135/287 (47%), Gaps = 17/287 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
+GR D + +++ K T ++ ID V+ G+ + ++ M KR D
Sbjct: 287 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-----IKRSID 341
Query: 201 ----SLRLVVEKLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+ ++ C + A+ + + + + FP+ + LIKG+C +++E L
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 401
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
REM + G TV YN + + L + D A+K+ M +GVP ++ T+++
Sbjct: 402 FREMSQRGLVGNTVTYNTL---IQGLFQAGDC----DMAQKIFKKMVSDGVPPDIITYSI 454
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ LCK + E A+ +F + + P+ T+ ++I+ + +A +V +G ++ + G
Sbjct: 455 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 514
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y ++ C E+A ++F +MK DG P+S TY+ L+
Sbjct: 515 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I +A R + + F M + G + + +++ L + G A+K+ K
Sbjct: 381 TYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 439
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P D I +L+ G C GKL++A + + + E YN +++ + K +
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D + L + GV NV + +IS C+ E+A LF M E G P
Sbjct: 500 VEDGWDL-------FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 552
Query: 344 NETTFLVLIKSLYQAARVGEGD-----EMIDRMKSAGYA 377
N T+ LI+ AR+ +GD E+I M+S G+
Sbjct: 553 NSGTYNTLIR-----ARLRDGDKAASAELIKEMRSCGFV 586
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++LI +C +L A + +M + G+E V + +L+ C K R+ SEA
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN---GYCHGK---RI-SEAVA 155
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
++ M N TFN LI L ++ +A+ L RM GC P+ T+ ++ L
Sbjct: 156 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 215
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ + ++ +M+ Y + LC + + A+++F +M G P+
Sbjct: 216 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 275
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAV 442
TY+ L+ C + R A+ L + +
Sbjct: 276 TYNSLIRCLCNYGRWSDASRLLSDMI 301
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 90/217 (41%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ G+C ++ EA L +M+ ++ TV +N ++ + L K
Sbjct: 132 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF-LHNKA----- 185
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
SEA ++ M G ++ T+ +++ LCK + A+ L +M + + +
Sbjct: 186 -SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 244
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I +L V + + M + G Y + LC R A + M
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
NP+ T+ L+ + ++ +A L+DE ++ ++
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P VE FN L+S + K+ + + I L RM + ++ +LI + +++
Sbjct: 61 LPSIVE-FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 119
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ +M GY L C +RI +A+++ ++M + P++ T++ L+
Sbjct: 120 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 179
Query: 426 CAHNRVDKANALFDEAVRNGVE 447
HN+ +A AL D V G +
Sbjct: 180 FLHNKASEAVALIDRMVARGCQ 201
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T + I L +AG F++M D G D + ++++ LC+ G A E
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEY 474
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
L K +++ PD +++I+G C GK+++ L + G + + Y + +S
Sbjct: 475 LQK---SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM---ISG 528
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
CRK L EA+ + +M+ +G N T+N LI + + +L M G
Sbjct: 529 FCRKG----LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584
Query: 341 CHPNETTFLVLIKSLYQA 358
+ +T ++I L+
Sbjct: 585 FVGDASTISMVINMLHDG 602
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 14/309 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
GR D A+ + + ++ V P + I + R G+ + L ERM ++G D
Sbjct: 229 GRVHDVVALFERWIQDR-VYSPDVWSFNVVIKGVCRVGQVQKALELVERMN-EFGCSPDT 286
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ ++V+ LC S ++++ + P+ +I G+C GKL++A +
Sbjct: 287 VTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 346
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
+M G TV YN +++ K+ L S E V M P +V TF+ LI
Sbjct: 347 DMVASGIMPNTVTYNVLINGYGKV------GDLGSAVE-VYQQMTRLRCPPDVVTFSSLI 399
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK-SAGY 376
C+ + +DA++++ M + PN TF ++I SL + R E +++ +
Sbjct: 400 DGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDI 459
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
A Y + LC ++++A + + M+ G PD TY +L+ +C +R+ +A
Sbjct: 460 APQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIM 519
Query: 437 LFDEAVRNG 445
F E V G
Sbjct: 520 FFHEMVEAG 528
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L R+GR L F++M YG+ PD
Sbjct: 154 LCRSGRQADALQLFDQMTTHYGYS----------------------------------PD 179
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ L+ LD + L + G + AYN ++ + R D L
Sbjct: 180 ARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL-- 237
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
E+ + D Y+ +V +FNV+I +C++ + + A++L RM E+GC P+ T +L+
Sbjct: 238 -FERWIQDRVYS---PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILV 293
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAI-GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
L + V G E++ R++ G + + ++ C ++E AM+V+ M G
Sbjct: 294 DGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGI 353
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
P++ TY++L+ + + A ++ + R
Sbjct: 354 MPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 385
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 99/236 (41%), Gaps = 11/236 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ +D A+++ +V + + T I+ + G + +++M R D +
Sbjct: 336 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR-LRCPPDVVT 394
Query: 202 LRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM- 259
+++ C G A ++ D A + I P+ ++I C + DEA L E+
Sbjct: 395 FSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELN 454
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
R YN ++D + K C K D EA + ME G + T+ +LI
Sbjct: 455 LRPDIAPQAFIYNPVIDVLCK-CGKVD------EANLIRKGMEEKGCRPDKYTYTILIIG 507
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
C R +AI F+ M E GC P+ T I L +A E D ++ R+ S G
Sbjct: 508 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM-RLASGG 562
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR-M 371
+ L+S+ + + L + E+GC + L+ SL RV + + +R +
Sbjct: 183 LSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWI 242
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+ Y+ + + +C + ++++A+ + E+M G +PD+ T+++L+ C N V
Sbjct: 243 QDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEV 302
Query: 432 DKANALFDEAVRNGV 446
+ + + R+GV
Sbjct: 303 SRGHEVLRRLQRDGV 317
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 189/447 (42%), Gaps = 46/447 (10%)
Query: 13 LLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNP--KTIDDPDQVIARSLSG- 69
++ + P+ F SP FSP F S PFSS + + I+ ++I S S
Sbjct: 1 MILRRPNFFQSP----LRYFSPIPLSIFFSHPFSSSTDNQSLHQNIETVFRIITTSSSST 56
Query: 70 ELLENLEADPLPISQRL------HLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQ 123
++ +LE+ + +S L + FSH P +L F ++ +
Sbjct: 57 DMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQAL----------------EFFNYTAK 100
Query: 124 NANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVL 183
F HT ++ GR + F I D L+D K +L S +V GR +V
Sbjct: 101 RRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVK--FKDPSLISLRTVMVVLGRIAKVC 158
Query: 184 GFFERMERDYGFKR-----DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL 238
+ +E FK+ D ++ LC+ A + + P+ + ++
Sbjct: 159 SVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNI 218
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ GW +EA+ EM G + V+YNC++D C+ ++ +A KV+
Sbjct: 219 LLSGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVY---CKNREM----DKAFKVV 268
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M +P +V T+ +I L + + + A + M E+GC+P+ + I++ A
Sbjct: 269 GKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIA 328
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E +++D M + G + Y F ++ A +++ +M G P++++
Sbjct: 329 KRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSC 388
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+ + + + + A L+++ ++ G
Sbjct: 389 LFLVRLFKKYEKEEMALELWNDMIQKG 415
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 13/238 (5%)
Query: 184 GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKG 242
GFF+ M + G K D S +V+ C+N A K+V +E P D I +I G
Sbjct: 231 GFFDEM-IEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGG 289
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLD 300
+ G+ D+A+ + +EM G AYN + C++K RL EA +L +
Sbjct: 290 LGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAK--------RL-HEAFDLLDE 340
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ N T+N+ + A L+ RM + GC PN + L L++ + +
Sbjct: 341 MVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEK 400
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
E+ + M G+ E LC + ++ +A S F +M GH P ++
Sbjct: 401 EEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSF 458
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 295 EKVLLDME--YNGVPR----NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EK ++D Y+G+ N++TFN+L+S + SE+A F M E G P+ ++
Sbjct: 192 EKSMMDARNVYHGLKSMFRPNLQTFNILLSGW---KSSEEAEGFFDEMIEMGVKPDVVSY 248
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + + +++ +M+ Y + L + + ++A ++ ++MK
Sbjct: 249 NCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKE 308
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G PD Y+ + +C R+ +A L DE V G+ Y +
Sbjct: 309 YGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNL 355
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 148/329 (44%), Gaps = 24/329 (7%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
GR + + + ++ VL + + ID L RA R ++ +M ++ K D
Sbjct: 279 LGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMT-EHNIKPDVI 337
Query: 201 SLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
++++ L + G A +L+ + T + PD + LIKG+C G LDEAK L E+
Sbjct: 338 LYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEI 397
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ Y IL C +CR L +A+++ +ME +G +V TFN LI
Sbjct: 398 SKNDCFSSACTYT-ILIC--GMCRSG----LVGDAQQIFNEMEKHGCYPSVVTFNALIDG 450
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHP--------------NETTFLVLIKSLYQAARVGEGD 365
CK E A LFY+M E G +P + + +++ L + + +
Sbjct: 451 FCKAGNIEKAQLLFYKM-EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAY 509
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ ++ +G+A Y + C I A +F++++ G +PDS TY L+
Sbjct: 510 NILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGL 569
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ NR + A + D+ ++NG + Y+
Sbjct: 570 LSANREEDAFTVLDQILKNGCTPITEVYK 598
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 120/282 (42%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + +VR LG + RM + + + ++++ +C++G A ++ +
Sbjct: 163 TYNTVLHVMVRKEVVLLALGIYNRMLK-LNCLPNIATFSILIDGMCKSGKTQNALQMFDE 221
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T I P+ ++I G C K D A RL M G +V YN +L KL R
Sbjct: 222 MTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGR 281
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ L EK ++ G ++ LI L + RR EDA + +M E P
Sbjct: 282 VDEALGLLKYFEKDRYVLDKQG-------YSCLIDGLFRARRFEDAQVWYRKMTEHNIKP 334
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + +++K L +A + + +++ M G Y + C + +++A S+
Sbjct: 335 DVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLH 394
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++ + + TY +L+ C V A +F+E ++G
Sbjct: 395 LEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHG 436
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 111/261 (42%), Gaps = 36/261 (13%)
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL----------- 281
+ I D+LIK D + ++ +E+ R GF + A+ ++ +K+
Sbjct: 95 NMIIDMLIK----DNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFE 150
Query: 282 ------CRKKDPFRLDS------EAEKVLLDM-------EYNGVPRNVETFNVLISNLCK 322
C K D F ++ E VLL + + N +P N+ TF++LI +CK
Sbjct: 151 MMKDFDC-KPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLP-NIATFSILIDGMCK 208
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
++++A+++F M + PN+ T+ ++I L QA + + MK G
Sbjct: 209 SGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVT 268
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y L C + R+++A+ + + + D + D + Y L+ R + A + +
Sbjct: 269 YNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMT 328
Query: 443 RNGVEVKPKEYRVDPRYLKKP 463
+ ++ Y + + L K
Sbjct: 329 EHNIKPDVILYTIMMKGLSKA 349
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 119/285 (41%), Gaps = 25/285 (8%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ +C +G A+++ + +P + LI G+C G +++A+ L +M G
Sbjct: 411 ILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIG 470
Query: 263 G----FELGTVAYNCILDCVS------KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
F + N +LD S +LC L +A +L+ + +G N+ T
Sbjct: 471 RNPSLFLRLSQGANRVLDTASLQTMVEQLCDSG----LILKAYNILMQLTDSGFAPNIIT 526
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N+LI CK A KLF + G P+ T+ LI L A R + ++D++
Sbjct: 527 YNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQIL 586
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G + Y F+T C +I A S++ K DSE +
Sbjct: 587 KNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLK------SVEENFE 640
Query: 433 KANALFDEAVRNGVEV--KPKEYRVDPRYLKKPIAVKKGKKRETL 475
K +EAVR +E+ K ++++ P + + G+ E L
Sbjct: 641 KGEV--EEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEAL 683
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N T+ ++IS LC+ ++++ A +LF M + GC P+ T+ L+ + RV E ++
Sbjct: 230 NKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLL 289
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ Y + K+ Y + L R E A + KM PD Y ++M
Sbjct: 290 KYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKA 349
Query: 429 NRVDKANALFDEAVRNGV 446
+ A L +E G+
Sbjct: 350 GKFKDALRLLNEMTERGL 367
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 128/313 (40%), Gaps = 30/313 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERME----------RDYGFKR--DKDSLRLVVEKLCEN 212
T + ID +AG + F +ME G R D SL+ +VE+LC++
Sbjct: 443 TFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDS 502
Query: 213 GYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
G A ++ + F P+ ++LI G+C G ++ A +L +E+ G +V Y
Sbjct: 503 GLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTY 562
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+++ + R++D F + + K NG E + ++ C RR++ +
Sbjct: 563 GTLINGLLSANREEDAFTVLDQILK-------NGCTPITEVYKSFMTWSC--RRNKITLA 613
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK---KDYYEFLT 388
+ P + ++KS+ + GE +E + + + + Y +L
Sbjct: 614 FSLWLKYLRSIPGRDS--EVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLI 671
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
LC R+E+A+ +F ++ + L+ + +D A +F + G +
Sbjct: 672 GLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYML 731
Query: 449 KPKEYRVDPRYLK 461
P R+ R LK
Sbjct: 732 MP---RICNRLLK 741
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLD 250
D G+ S +++ LC G A N + P+ L+ G+ G LD
Sbjct: 320 DEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLD 379
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
A + EM G + V Y ++D LC+K + +S +K+L+D P N
Sbjct: 380 GAMLIWNEMKSSGCKPNVVVYTNMID---VLCKKMMFDQAESLIDKMLMD----NCPPNT 432
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
TFN LI LC R A+ +F+ M GCHPN+ T+ L+ L++ + M+
Sbjct: 433 VTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIE 492
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M + G+ + Y + LC + + AM + +M G PD+ T++ ++ +C +
Sbjct: 493 MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGK 552
Query: 431 VDKANALFDE 440
V A L +
Sbjct: 553 VSIAACLLGQ 562
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 129/291 (44%), Gaps = 22/291 (7%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
G + +D L+R V+ ++ M R G + + L++ LC+N A K+
Sbjct: 121 GVRVYNHLLDALLRENMVGAVVPVYDNM-RKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179
Query: 222 VKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----AYNCILD 276
+ + + + PD+ ++ G C G+++EA+ GF TV +YN +
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR---------GFLAETVPVQASYNAV-- 228
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
V LC + FR+ E V+ +M G+ NV T+ ++ CK R A + RM
Sbjct: 229 -VHALCGE---FRM-WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 283
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
GC PN TF L+K ++ +V + M M G+A Y + LC I +
Sbjct: 284 VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 343
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ A+ F MK + P++ TY L+ + +D A +++E +G +
Sbjct: 344 KGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCK 394
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI---LDCVSKLCRKKDPFRLDSEAE 295
L+KG+ DGK+ +A + M G+ T++YN + L C+ L D F
Sbjct: 298 LVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN------ 351
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
M+ N + N T++ L+ + A+ ++ M GC PN + +I L
Sbjct: 352 ----SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 407
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + + +ID+M + + RLC R+ +A++VF M+ +G +P+
Sbjct: 408 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 467
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY+ L+ A A+ E + NG E+ Y
Sbjct: 468 RTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 505
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 29/185 (15%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++ +LC+ G A + N P+D+ + L+ G +G +A + EM
Sbjct: 434 TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEM 493
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKK----------------DPFRLD------------ 291
GFEL V YN +++C+ ++C +K D F +
Sbjct: 494 LNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKV 553
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A +L M PRNV + +LIS LC + +A+ +M G PNE T+ VL
Sbjct: 554 SIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVL 613
Query: 352 IKSLY 356
+++++
Sbjct: 614 VRAIF 618
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 118/281 (41%), Gaps = 12/281 (4%)
Query: 146 DFKAIHDFLVDNK-EVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
D K DF K L P T ++ +D AG + + M + G K +
Sbjct: 342 DLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM-KSSGCKPNVVVY 400
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+ AE L+ + P + + + LI C G++ A + M R
Sbjct: 401 TNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR 460
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G YN +L + + KD F + +++M NG ++ T+N +I+ LC
Sbjct: 461 NGCHPNDRTYNELLHGLFREGNHKDAFAM-------VIEMLNNGFELSLVTYNTVINCLC 513
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
++ + A+ L RM G P+ TF +I + + +V ++ +M +
Sbjct: 514 QMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVV 573
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y ++ LC ++ AM KM +G P+ T+++L+
Sbjct: 574 AYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIK 353
+ L +M GV + I + ++ A+K FYR + GC P + L+
Sbjct: 71 QYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLD 130
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+L + VG + D M+ AG Y + LC +R++ A + ++M G +P
Sbjct: 131 ALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHP 190
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAV 442
D ++ +++ C RV++A E V
Sbjct: 191 DEVSHGTIVSGMCKLGRVEEARGFLAETV 219
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 125/296 (42%), Gaps = 11/296 (3%)
Query: 163 PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
P +A + ID L++AGR L FE M + + +V++ LC+ A K
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPT-RTTYTVVIDGLCKAQMLPDACK 454
Query: 221 LVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ + + PD LI G+ K+DEA++L M G E V Y I+
Sbjct: 455 VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 514
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
KL + +EA++V+ M G + F L+S R+E+A ++ M
Sbjct: 515 KL-------DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 567
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
GC P+ + LI L+ RV E + D M G A Y + I +E A
Sbjct: 568 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ E M G PD Y+ LM + RVD+A ++D V +G++ + V
Sbjct: 628 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 683
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 130/342 (38%), Gaps = 59/342 (17%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID L + GR + FERM R G D + ++E L +G A +L ++
Sbjct: 166 IDPLCKLGRVDEAYELFERM-RKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P ++ D LI C GK+DEA + + + VAYN ++D KL R D
Sbjct: 225 YEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGL 284
Query: 289 -----------------------------RLDSEAEKVLLDMEYNGVPR----------- 308
RLD E L Y P
Sbjct: 285 KLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGL 344
Query: 309 -----------------NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+V ++ +I L +R ++A +LF ++ GC PN + +
Sbjct: 345 YDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAV 404
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A R+ +G + + M + + Y + LC + + A VFE+M G
Sbjct: 405 IDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGC 464
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
PD+ TY L+ + +++D+A L D + G E Y
Sbjct: 465 VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTY 506
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 10/297 (3%)
Query: 144 RKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
RK KAI FL P ++ + I L + + FF M D G + D +
Sbjct: 34 RKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSM-IDNGCEPDVIA 92
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ C+ G L+ PD + +I G+C G LD ++ EM
Sbjct: 93 FTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLA 152
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G AY ++D + KL R + + L K +G + TF LI L
Sbjct: 153 AGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRK-------SGCLGDYVTFMTLIEALS 205
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ ++A +L+ M E G P LI +L +A +V E +E+ + + A +
Sbjct: 206 NHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRV 265
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C + R++ + + +M + PD +TY++L+ + NR+D A LF
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELF 322
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 47/262 (17%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD C++++ G C K+D+A L EM G E V+YN ++ ++ + K D
Sbjct: 16 LMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASI-DKMD-- 72
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE--------------------- 327
EA K M NG +V F LI CK + +
Sbjct: 73 ----EAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYT 128
Query: 328 -------------DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
K+ M GC P+ + VLI L + RV E E+ +RM+ +
Sbjct: 129 SVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKS 188
Query: 375 GYAIGKKDYYEFLTRLCGIE---RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G +G DY F+T + + ++++A ++ +M G+ P E D L+ C +V
Sbjct: 189 G-CLG--DYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKV 245
Query: 432 DKANALFDEAVRNGVEVKPKEY 453
D+AN ++ V V Y
Sbjct: 246 DEANEIYQTVVAKKVATSRVAY 267
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 151/387 (39%), Gaps = 78/387 (20%)
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYF--GRRKDFKA----IHDFLVDNKEVLGPKTLA 167
I+ +N ++ A+ DE FF G D A IH F + +G L
Sbjct: 55 IVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLN 114
Query: 168 SCIDRLVRAGRP-----TQVL-GFFERMERDYGFKR-----------DKDSLRLVVEKLC 210
+ R RP T V+ G+ + + D GFK D + ++++ LC
Sbjct: 115 QALKRF----RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLC 170
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDL-LIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ G A +L + D + + LI+ GKLDEA L REM G+E
Sbjct: 171 KLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYE---- 226
Query: 270 AYNCILDC-VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
Y + D + LC+ ++D EA ++ + V + +N L+ CK+ R +D
Sbjct: 227 PYLEVQDSLIFALCKAG---KVD-EANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDD 282
Query: 329 AIKLFYRMGE-----------------------------------WGCHPNETTFLVLIK 353
+KL +M E +GC PN T+ +I+
Sbjct: 283 GLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQ 342
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
LY A R+ E D A+ Y + L +RI++A +FEK+KT G +P
Sbjct: 343 GLYDAQRMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSP 396
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDE 440
+ Y ++ R++ F++
Sbjct: 397 NVVAYTAVIDGLLKAGRIEDGLKNFED 423
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 96/230 (41%), Gaps = 16/230 (6%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +I+ + G ++ A + M + G AYN ++D KL R F
Sbjct: 606 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF-- 663
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFL 349
V M +G+ N TFNVL+ L K +++ A LF M E P ++
Sbjct: 664 -----GVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYT 718
Query: 350 VLIKSLYQAARVGEG----DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+LI L +A RV E EMIDR G Y + L RI +A + E
Sbjct: 719 ILIDGLGKAGRVSEAFSQFQEMIDR----GIIPECHTYTSLIYSLAKAGRIPEAKKLVED 774
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M G NPD + Y L+T + VD A +F E ++ G Y+V
Sbjct: 775 MVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKV 824
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 120/278 (43%), Gaps = 13/278 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ID L GR + F+ M + G D + +++ + G A ++++ A
Sbjct: 578 SLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 636
Query: 228 E-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD + L+ G+ ++D+A + M G + V +N ++ + K +
Sbjct: 637 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 696
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
F L E +E + VP + ++ +LI L K R +A F M + G P
Sbjct: 697 AFSLFKEM------LEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECH 750
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI SL +A R+ E ++++ M G + Y +T L ++ A VF++M
Sbjct: 751 TYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 810
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
G P+ TY +L + A R AL EAV+
Sbjct: 811 MKRGCAPNEVTYKVLRRGFRAAGR-----ALDLEAVKQ 843
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 34/187 (18%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA L +M G+ +V N++++ LCK R+ + AI+LF M GC P ++ +I
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62
Query: 353 KSLYQAARVGEG----DEMIDR----------------MKSAGYAIGKKDYYEFLTRL-- 390
L ++ E + MID K+ +G + L R
Sbjct: 63 SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRP 122
Query: 391 ------------CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
C ++ + E+M G PD+ Y +L+ C RVD+A LF
Sbjct: 123 DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELF 182
Query: 439 DEAVRNG 445
+ ++G
Sbjct: 183 ERMRKSG 189
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 10/272 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGW 243
+F +E+ G K + ++ LC G A ++VK+ P D+I + LI G+
Sbjct: 476 WFRLLEK--GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 533
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C +GK++ RL EM + G + YN +L + + + D +L E +
Sbjct: 534 CNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE-------FKA 586
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G+ N+ T+ +++ CK R ED LF + N + ++IK+ Q V
Sbjct: 587 SGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAA 646
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++++ MKS G Y + +C I +E A + ++M+ +G P+ Y L+
Sbjct: 647 ALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIG 706
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++D A + + E + + Y V
Sbjct: 707 GYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 738
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D + ++ LC G A KL + A+ + + ++++G+C ++++
Sbjct: 553 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L E+ EL ++ YN I + C+ + + A ++L +M+ G+ N T
Sbjct: 613 ENLFNELLSKKMELNSIVYNII---IKAHCQNGNV----AAALQLLENMKSKGILPNCAT 665
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LI +C I EDA L M + G PN + LI + ++ + M
Sbjct: 666 YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMI 725
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S K Y + C + +E+A ++ KMK G PD TY++L +C N +D
Sbjct: 726 SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMD 785
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A + D+ G+ V Y
Sbjct: 786 NAFKVCDQMATEGLPVDEITY 806
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 16/225 (7%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG----FELGTVAYNCILDCVSKLCRKK 285
FP K C+ L+ + ++ + R M G F V ++ LC+
Sbjct: 206 FPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNV--------INALCKGG 257
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
++++ E + + ME G+ NV T+N +I+ LC+ R ++A +L +M G PN
Sbjct: 258 ---KMENAIE-LFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNL 313
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L + + + ++D M +G+ + + C + IE A+ + +
Sbjct: 314 KTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDV 373
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
M + P S T LM +C ++++ A +E + +G+ + P
Sbjct: 374 MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHP 418
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 136/335 (40%), Gaps = 58/335 (17%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMER------DYGFKRDKDSLRLVVEKLCENGYASY 217
KT + I+ L++ L FF+++ GF + +++ C+ G
Sbjct: 314 KTYGALINGLIK-------LNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEG 366
Query: 218 AEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A K +KD + I P L++G+C +++ A+ E+ G + NC
Sbjct: 367 ALK-IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH--PDNC-Y 422
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
V LC+K FR S + + N P ++ +L+ LCK + +A +L++R
Sbjct: 423 SVVHWLCKK---FRYHSAFRFTKMMLSRNFRPSDL-LLTMLVCGLCKDGKHLEATELWFR 478
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY------------ 383
+ E G ++ T LI L A ++ E ++ M G + + Y
Sbjct: 479 LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 538
Query: 384 ----------------------YEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
Y FL R LC + +++ A+ ++++ K G + TY +
Sbjct: 539 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 598
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M +C NR++ LF+E + +E+ Y +
Sbjct: 599 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 633
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 111/283 (39%), Gaps = 10/283 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLV 222
KT + LV+A + F M G D S V+ LC+ G A E +
Sbjct: 210 KTCNFLLSSLVKANEFEKCCEVFRVMSE--GACPDVFSFTNVINALCKGGKMENAIELFM 267
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
K I P+ + +I G C +G+LD A L +M G + Y +++ + KL
Sbjct: 268 KMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKL- 326
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ VL +M +G NV FN LI CK+ E A+K+ M
Sbjct: 327 ------NFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNIT 380
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P T L++ ++ ++ + ++ + S+G +I + Y + LC R A
Sbjct: 381 PTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRF 440
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ M + P +L+ C + +A L+ + G
Sbjct: 441 TKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+ +FY + G P+ T L+ SL +A + E+ R+ S G + +
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 251
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
LC ++E A+ +F KM+ G +P+ TY+ ++ C + R+D A L ++ GV+
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311
Query: 449 KPKEY 453
K Y
Sbjct: 312 NLKTY 316
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 7/236 (2%)
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+ G+ + AE+LV++ + + L+ GWC GKLDEAK + M G V
Sbjct: 169 KTGHVAAAERLVEELQPRLPLSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVV 228
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
+N +L R +D F L E ME P N ++ L+ L R ++ +
Sbjct: 229 FNTLLAGFVAADRFEDAFELARE-------MERRDCPPNAVSYTTLMQGLGSRGRVDEVM 281
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
++F M GC P+ T+ L+ + +A R+ +G E +D M + Y F
Sbjct: 282 RVFVEMRRKGCAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAH 341
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
E++E+ + + E+M+ PD Y++++ C +A AL++E +G+
Sbjct: 342 EKKEQLEECLELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSGL 397
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ AE+++ +++ +P ++ + L+ C++ + ++A + RM G P+ F L
Sbjct: 174 AAAERLVEELQPR-LPLSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVVFNTL 232
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ A R + E+ M+ Y + L R+++ M VF +M+ G
Sbjct: 233 LAGFVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMRRKGC 292
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR-YLKKPIAVKKGK 470
PDS TY L++ +C R+ + D R+ + RVDP YL +A +K +
Sbjct: 293 APDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDAL-------RVDPGVYLGFFVAHEKKE 345
Query: 471 KRETLPEKMARKR 483
+ E E M R R
Sbjct: 346 QLEECLELMERMR 358
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 96/254 (37%), Gaps = 30/254 (11%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR-----------KKDP 287
L++G G++DE R+ EM R G +V Y ++ K R +D
Sbjct: 267 LMQGLGSRGRVDEVMRVFVEMRRKGCAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDA 326
Query: 288 FRLD-----------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
R+D E +++ M P ++ +NV++ CK+ ++ A+
Sbjct: 327 LRVDPGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAM 386
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK--DYYEFLT 388
L+ M G P TF +++ L + + M G + + + L
Sbjct: 387 ALWNEMENSGLSPGVDTFAIMVNGLVGQGSLVDACSFFKDMVGRGLFVAPQYGVLKDLLN 446
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
L E++E A V+ + + G + + + + A V A + + + G+
Sbjct: 447 ALVRDEKLELAKDVWGCIVSRGCELNVGAWTIWIHALYAKKHVKDACSYCLDMLEAGLMP 506
Query: 449 KPKEYRVDPRYLKK 462
+P + + LKK
Sbjct: 507 QPDTFAKLMKGLKK 520
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 119/281 (42%), Gaps = 15/281 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKR-DKDSLRLVVEKLCENGYASYAEKLVK 223
T+ + + L R GR + E M R G D +V+ C+ G A + +
Sbjct: 139 TVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAE 198
Query: 224 DT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
A + D + L+ G C G++D A+ + M R G E V Y + + C
Sbjct: 199 RMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMF---IVEYC 255
Query: 283 RKK---DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
R+ D F L E M GV +V T + L+ LCK R +A LF M +
Sbjct: 256 RRNAVDDAFSLYEE-------MVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKI 308
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G PN T+ +LI +L +A R E ++ + S G + Y + LC +I++A
Sbjct: 309 GAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEA 368
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+F +D H P+ TY +L+ C VD A + E
Sbjct: 369 KDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSE 409
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 10/307 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G+ H+ L + EV + S ++ L + G+ + F M + G D
Sbjct: 468 LGQEAALDVYHEMLCEGVEV-NKFIVDSLVNGLKKNGKIEKAEALFREMN-ERGVLLDHV 525
Query: 201 SLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ +++ L + G A K+ ++ T + PD + ++ I C+ GK EA+ EM
Sbjct: 526 NYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEM 585
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G + V YN ++ S+ + ++A K+L M+ + + N+ T++ LI
Sbjct: 586 QSTGLKPDQVTYNTMIAAQSREGKT-------AKALKLLNGMKRSSIKPNLITYSTLIVG 638
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
L + E A L M G P T ++++ Q R E+ + M +AG
Sbjct: 639 LFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCAD 698
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + LC +AM V E+M G PD+ T++ L+ +D A + +D
Sbjct: 699 ITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYD 758
Query: 440 EAVRNGV 446
+ + +G+
Sbjct: 759 QMLYHGI 765
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
R A + R + TV+YN ++ S+ + E +L +M GVP + T
Sbjct: 89 RPALALLRSSESVDTVSYNVVMSGFSE--------QGGLAPEALLAEMCKRGVPFDAVTV 140
Query: 314 NVLISNLCK---IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
N ++ LC+ + R+ ++ R G G + + L+ + + + +R
Sbjct: 141 NTVLVGLCRDGRVDRAAALAEVMVRGGGIG-GLDVVGWNSLVDGYCKVGDMETAFAVAER 199
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
MK+ G + Y + LC ++ A + + MK DG P+ TY + + ++C N
Sbjct: 200 MKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNA 259
Query: 431 VDKANALFDEAVRNGV 446
VD A +L++E VR GV
Sbjct: 260 VDDAFSLYEEMVRKGV 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 6/209 (2%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++++ G+ G L LA EM + G V N +L LCR R + AE
Sbjct: 107 NVVMSGFSEQGGLAPEALLA-EMCKRGVPFDAVTVNTVL---VGLCRDGRVDRAAALAEV 162
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
++ G+ +V +N L+ CK+ E A + RM G + + L+ L
Sbjct: 163 MVRGGGIGGL--DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+A V +M+D MK G Y F+ C ++ A S++E+M G PD
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNG 445
T L+ C R +A ALF E + G
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIG 309
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 127/344 (36%), Gaps = 79/344 (22%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
I+ L G+ + F E M+ G K D+ + ++ G + A KL+ +
Sbjct: 566 INCLCMLGKSKEAESFLEEMQST-GLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSS 624
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK-------- 280
I P+ LI G G +++AK L EM GF ++ + +L S+
Sbjct: 625 IKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLIL 684
Query: 281 ----------LCRKKDPFR----------LDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
LC + + +A VL +M G+ + TFN LI
Sbjct: 685 EIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGH 744
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS------- 373
K ++A + +M G PN TF L+ L A R+GE D +++ MK
Sbjct: 745 FKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSN 804
Query: 374 -------AGYA---------------IGK------KDYYEFLTRLCGIERIEQAMSVFEK 405
GY +GK Y ++ + + QA +F +
Sbjct: 805 LTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNE 864
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
M+ G P S TYD+L++ W +RNG EV+
Sbjct: 865 MQNRGVLPTSCTYDILVSGW--------------SKLRNGTEVR 894
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 8/268 (2%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++++ LC+ G AE+++ + + I P+ +I G G + +A REM
Sbjct: 389 VLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER 448
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + V Y ++D K C ++ A V +M GV N + L++ L K
Sbjct: 449 GIDPNVVTYGTVIDGSFK-CLGQEA------ALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ E A LF M E G + + LI L++ + ++ +
Sbjct: 502 NGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVV 561
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y F+ LC + + ++A S E+M++ G PD TY+ ++ + KA L +
Sbjct: 562 YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621
Query: 443 RNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
R+ ++ Y L + AV+K K
Sbjct: 622 RSSIKPNLITYSTLIVGLFEAGAVEKAK 649
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 9/259 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
TL++ + L + GR ++ F ME+ G + + ++++ L + + + L+ +
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEK-IGAAPNHVTYCMLIDTLAKAQRGNESLSLLGE 339
Query: 225 TANEIFPDDKICDLLIKGW-CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ D I + W C +GK+DEAK + R V Y ++D LC+
Sbjct: 340 VVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDA---LCK 396
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +D AE+VL +ME + NV TF+ +I+ L K A M E G P
Sbjct: 397 AGN---VDG-AEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDP 452
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ +I ++ ++ M G + K + L +IE+A ++F
Sbjct: 453 NVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512
Query: 404 EKMKTDGHNPDSETYDLLM 422
+M G D Y L+
Sbjct: 513 REMNERGVLLDHVNYTTLI 531
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 118/310 (38%), Gaps = 13/310 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
GR A+ + +V + G + S +D + G ERM + G D
Sbjct: 151 GRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERM-KAQGVGVDV 209
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTA--NEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+V LC G A +V DT + + P+ + I +C +D+A L
Sbjct: 210 VGYNSLVAGLCRAGEVDAARDMV-DTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYE 268
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM R G V + + V LC K F SEA + +ME G N T+ +LI
Sbjct: 269 EMVRKGVLPDVVTLSAL---VGGLC-KDGRF---SEAYALFREMEKIGAAPNHVTYCMLI 321
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
L K +R +++ L + G + + L+ L + ++ E +M S +
Sbjct: 322 DTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHT 381
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + LC ++ A V +M+ +P+ T+ ++ V KA
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441
Query: 438 FDEAVRNGVE 447
E G++
Sbjct: 442 MREMKERGID 451
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 11/167 (6%)
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
+N +++Y + L + I P+ + L+ G G++ E+ + EM + G E +
Sbjct: 751 DNAFSTYDQMLY----HGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLT 806
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y+ ++ K K + RL E M G V T+N LIS+ K+ A
Sbjct: 807 YDILVTGYGKQSNKVEAVRLYCE-------MVGKGFLPKVSTYNALISDFSKVGMMSQAK 859
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+LF M G P T+ +L+ + E + + MK G++
Sbjct: 860 ELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFS 906
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P + D+L+ G+ EA RL EM GF YN ++ SK+
Sbjct: 800 IEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKV------- 852
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ S+A+++ +M+ GV T+++L+S K+R + K M E G P++ T
Sbjct: 853 GMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTL 912
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 139/320 (43%), Gaps = 36/320 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID L R G+ L + MER G + ++ +++++LC+ A+KL + A I
Sbjct: 166 IDMLCREGKLNAALEIRDDMERA-GLFPNVLTVNIMIDRLCK------AQKL--EEACSI 216
Query: 230 FP--DDKIC-------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
F DDK+C LI G G++D+A L +M G G + Y ++ K
Sbjct: 217 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 276
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
RK+D K+ +M + G ++ N + + K +E LF + G
Sbjct: 277 CGRKED-------GHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG 329
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ ++ +LI L +A E E+ MK G + Y + C ++ +A
Sbjct: 330 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 389
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY------- 453
+ E+MK GH P TY ++ +R+D+A LF+EA NG+++ Y
Sbjct: 390 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGF 449
Query: 454 ----RVDPRYLKKPIAVKKG 469
R+D YL ++KG
Sbjct: 450 GKVGRIDEAYLIMEELMQKG 469
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 136/306 (44%), Gaps = 23/306 (7%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
H F+ D ++ + I LV+AG + F M ++ G D + V++ C
Sbjct: 328 HGFIPD------ARSYSILIHGLVKAGLANETYELFYAM-KEQGCVLDTHAYNAVIDGFC 380
Query: 211 ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDG-----KLDEAKRLAREMYRGGFE 265
++G + A +L+++ + P ++ G +DG +LDEA L E G +
Sbjct: 381 KSGKVNKAYQLLEEMKVKGHPPT----VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 436
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
L V Y+ ++D K+ R+D EA ++ ++ G+ NV T+N L+ L K
Sbjct: 437 LNVVVYSSLIDGFGKV------GRID-EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 489
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+A+ F M + C PN+ T+ +LI L + + + M+ G Y
Sbjct: 490 INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTT 549
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++ L I +A +F + K +G PDS +Y+ ++ + N+ A ALF+E G
Sbjct: 550 MISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKG 609
Query: 446 VEVKPK 451
+ K
Sbjct: 610 CNIHTK 615
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 108/265 (40%), Gaps = 32/265 (12%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ +I G+ GK DEA L G +AYNCIL C+ K R ++ R+ E ++
Sbjct: 94 NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 153
Query: 297 ----------VLL-----------------DMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+L+ DME G+ NV T N++I LCK ++ E+A
Sbjct: 154 DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEA 213
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
+F M + C PN TF LI L + RV + + ++M G+ G Y +
Sbjct: 214 CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRS 273
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
R E ++++M G +PD + M +K ALF E +G
Sbjct: 274 FFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD 333
Query: 450 PKEYRVDPRYLKKPIAVKKGKKRET 474
+ Y + L VK G ET
Sbjct: 334 ARSYSILIHGL-----VKAGLANET 353
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 125/319 (39%), Gaps = 44/319 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYG---------------FK--RDKDSLRL--- 204
T +S ID L + GR +E+M D G FK R +D ++
Sbjct: 231 TFSSLIDGLGKCGRVDDAYSLYEKM-LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 289
Query: 205 VVEKLCE------NGY------ASYAEK---LVKD-TANEIFPDDKICDLLIKGWCVDGK 248
+V C N Y A EK L ++ A+ PD + +LI G G
Sbjct: 290 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGL 349
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+E L M G L T AYN ++D K + ++L L +M+ G P
Sbjct: 350 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL-------LEEMKVKGHPP 402
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V T+ +I L KI R ++A LF G N + LI + R+ E ++
Sbjct: 403 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIM 462
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ + G + L L E I +A+ F+ MK P+ TY +L+ C
Sbjct: 463 EELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 522
Query: 429 NRVDKANALFDEAVRNGVE 447
+ +KA + E + G++
Sbjct: 523 RKFNKAFVFWQEMQKLGLK 541
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 7/236 (2%)
Query: 218 AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
A ++ ++ + P+ ++LI C +GKL+ A + +M R G + N ++D
Sbjct: 144 ALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID- 202
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+LC+ + +L+ EA + M+ N TF+ LI L K R +DA L+ +M
Sbjct: 203 --RLCKAQ---KLE-EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML 256
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ G P + LI+S ++ R +G ++ M G + ++ + E
Sbjct: 257 DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETE 316
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ ++F ++ G PD+ +Y +L+ ++ LF G + Y
Sbjct: 317 KGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAY 372
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LCK R ++A++LF ++ + P + +I A + E +++R K+ G
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y LT L R+E+A+ +FE+MK D P+ TY++L+ C +++ A + D
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 440 EAVRNGV 446
+ R G+
Sbjct: 184 DMERAGL 190
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 10/229 (4%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+++VKD + P+ LI G C +G+L+EA + EM + G E Y L
Sbjct: 261 DRMVKDGCD---PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPL--- 314
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC SEA ++L M+ G N++TF LIS L + + E AI L+++M
Sbjct: 315 VSLCDAG----CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA 370
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P T+ LI L R + M S G + Y E + C + I++
Sbjct: 371 DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
AM +F+KM G +P+ TY+ L+ +C ++ A L + NG++
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 20/289 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLR-------LVVEKLCENGYASY 217
TL S L++ G+ V + RD K +R ++ LC+ G
Sbjct: 166 TLCSFTTLLIQLGKFDMV-----DLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQE 220
Query: 218 AEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A+ ++ + +P+ LI G C + LD A + M + G + +V Y+ +
Sbjct: 221 AKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL-- 278
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
++ LC + RL+ EA +L +M G+ V T+ + + +LC S +A++L +M
Sbjct: 279 -INGLCSEG---RLE-EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ GC PN TF LI L + + + +M + G Y + +LC R
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
E A ++F+ M + G P ++TY+ ++ +C + KA +FD+ ++ G
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 9/211 (4%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P + +++I G+ + EA+ +M + G + Y +D + + R F+
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA--IKLFYRMGEWGCHPNETT 347
+ E EK N P N+ T++ LI LC+ R+EDA L R+ +GC PN T
Sbjct: 609 IFHEMEK------RNYFP-NLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDT 661
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+K L R E D+++ M+ G ++ Y L C ++E A+++F M
Sbjct: 662 YTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMD 721
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
T G Y L+ C N +++A +F
Sbjct: 722 TLGFQLHLSDYKALICALCKENFIEEAQCIF 752
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 9/278 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + I L R G+ +G + +M D G + ++ +LC G A + K
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLAD-GLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
++ P + + +IK +C+ G + +A + +M + G + YN + + C
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL---IYGYC 458
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++ + + A ++L M+ NG+ + T+ LIS + + E A LFY M E G
Sbjct: 459 KQGNL----NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ +I + A+V + + +M +G + Y ++ I +A +
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
KM G P+ TY + C + R A +F E
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVK 223
T ++ I+ L GR + + E M + G + + + + LC+ G +S A E L K
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAGCSSEAVELLGK 332
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ + LI G DGK + A L +M G TV YN + +++LC
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL---INQLCV 389
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ R ++ A + M +G + +T+N +I C + + A+ +F +M + G P
Sbjct: 390 EG---RFET-AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI + + +++ MK G Y E ++ ++E A S+F
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M G +P+ TY ++ + +VD A ALF + V +G + Y V
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 130/344 (37%), Gaps = 32/344 (9%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + I +++ + + +T I G + + F++M + G + +
Sbjct: 391 GRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA-GSSPNVIT 449
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ C+ G + A +L++ N + PD LI G+ GKL+ A L M
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRL----------------------------DS 292
G V Y I+D L + D L S
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EAE M G+ NV T+ I LC+ R+ A K+F+ M + PN T+ LI
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629
Query: 353 KSLYQAARVGEGD--EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L Q R + + ++ R+ G Y + LCG R +A + M+ G
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
P E Y L+ C + +V+ A +F G ++ +Y+
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYK 733
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 155/388 (39%), Gaps = 67/388 (17%)
Query: 77 ADPLPISQRLHLIFSHVTPTPSLVQ--STLNFSPEAGRAI--------LGFNHWLTQNAN 126
+ PLPIS S P P LV ST+ SP+ + L +H +
Sbjct: 35 SSPLPIS-------STTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQT 87
Query: 127 FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFF 186
+TD L FF + RRK FK HD S ++RLVR
Sbjct: 88 HKNTDSVLRFFF-WISRRKFFK--HDM----------SCFVSMLNRLVR----------- 123
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANEIFPDDKICD---LLIKG 242
+R + D +R+++ K C N G + + + ++ +C LLI+
Sbjct: 124 ---DRLFA---PADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQ- 176
Query: 243 WCVDGKLDEAKRLAREMY----RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
GK D LAR+MY G + +N +++ + K R ++ + S
Sbjct: 177 ---LGKFDMVD-LARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI---- 228
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
Y+ P N T+ LI C+ + A +F RM + GC PN T+ LI L
Sbjct: 229 --FRYDAYP-NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E +M++ M G Y L LC +A+ + KMK G P+ +T+
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
L++ + + A L+ + + +G+
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGL 373
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 102/259 (39%), Gaps = 7/259 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + L F +M G + +++ + S AE
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVES-GNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ I G C +G+ A ++ EM + + Y+ + + LC+
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL---IYGLCQ 634
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ D+E +L + + G NV+T+ L+ LC R +A +L M + G P
Sbjct: 635 EGRA--EDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E + L+ + +V + M + G+ + DY + LC IE+A +F
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752
Query: 404 EKMKTDGHNPDSETYDLLM 422
+ M N D + +L+
Sbjct: 753 QTMLEKHWNSDEVAWTVLL 771
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 64/300 (21%)
Query: 161 LGPKTLASCIDRLVRAGRPT-QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
L PK + +++ + T VL FF + R FK D + S
Sbjct: 72 LSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSC------------FVSMLN 119
Query: 220 KLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREM---YRGGFELGTVAYNCIL 275
+LV+D +F P D + L+IK +G++ + E+ Y G+ L +
Sbjct: 120 RLVRD---RLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSF------ 170
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ L + F + A + + M +G+ ++ TFN +I+ LCK R ++A +
Sbjct: 171 ---TTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSH 227
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
+ + +PN T+ LI +G C
Sbjct: 228 IFRYDAYPNAFTYTSLI-------------------------LGH----------CRNHN 252
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ A ++F++M DG +P+S TY L+ C+ R+++A + +E V+ G+E Y +
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 17/247 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK---L 221
T S ID L R GR F ME+ F + + ++ LC+ G A AE L
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFP-NLYTYSSLIYGLCQEGRAEDAEMYNLL 647
Query: 222 VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ T P+ L+KG C +G+ EA +L M + G + Y +L K
Sbjct: 648 ARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECK- 706
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+++S A + M+ G ++ + LI LCK E+A +F M E
Sbjct: 707 -----NLKVES-ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHW 760
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL----CGIE--R 395
+ +E + VL+ L + +++ M+S + + Y L C I+ +
Sbjct: 761 NSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQ 820
Query: 396 IEQAMSV 402
I Q + +
Sbjct: 821 ISQQLGI 827
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 9/285 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I GR L M G ++ + V+ C+ G A K+ +
Sbjct: 516 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 575
Query: 225 --TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
T E+ P+ + + LI G+C GKLD A M G + YN ++ +
Sbjct: 576 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 635
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R +EA +++ +M G+ +V T+N+LI+ CK + A+++F M G
Sbjct: 636 RG-------TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 688
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
T+ LI +L + +V E D++ D G Y + I++A +
Sbjct: 689 ATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 748
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+M+ PD TY+ LM C RVD+A L DE G++
Sbjct: 749 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 793
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 12/248 (4%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM- 259
+ +++ LC G + A +L++ P+ + +I G+C G++ A + REM
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR---PNAVTYNTVIAGFCSRGRVQAALDIMREMR 541
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLIS 318
RGG Y + +S C+ R+D EA KV +M G V +N LI
Sbjct: 542 ERGGIAPNQYTYGTV---ISGWCKVG---RVD-EAVKVFDEMLTKGEVKPEAVMYNALIG 594
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + + A+ RM E G T+ +L+ +L+ R E E+++ M G A
Sbjct: 595 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 654
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A+ +FE M G TY L+ +V + + LF
Sbjct: 655 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 714
Query: 439 DEAVRNGV 446
DEAVR G+
Sbjct: 715 DEAVRRGI 722
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 177 GRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
G+ L + +RM ER G + L+V L +G + A +LV++ + + PD
Sbjct: 600 GKLDTALLYRDRMVER--GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 657
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
++LI G C +G + +A + M R G V Y ++ +SK + ++ +L EA
Sbjct: 658 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 717
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+ G+ ++ +N LI++ + A ++ M + P++ T+ L++
Sbjct: 718 VR-------RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 770
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L RV E ++ID M G Y ++ ++ A+ + +M G NP
Sbjct: 771 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 830
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY+ L+ C + + D A + E V NG+ Y
Sbjct: 831 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 869
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 16/239 (6%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++++ C GK A L R+M R V YN + ++ C + R+ + +
Sbjct: 487 NIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTV---IAGFCSRG---RVQAALDI 536
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKSL 355
+ E G+ N T+ +IS CK+ R ++A+K+F M G P + LI
Sbjct: 537 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 596
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ DRM G A+ Y + L R +A + E+M G PD
Sbjct: 597 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 656
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
TY++L+ C V KA +F+ R GV Y L KKG+ +ET
Sbjct: 657 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS-----KKGQVQET 710
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P TFN+++ +LC + A++L +M PN T+ +I RV
Sbjct: 479 LPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAAL 534
Query: 366 EMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMT 423
+++ M+ G A + Y ++ C + R+++A+ VF++M T G P++ Y+ L+
Sbjct: 535 DIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 594
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++D A D V GV + Y +
Sbjct: 595 GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 626
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 24/257 (9%)
Query: 150 IHDFLVDNK--------EVLGPKTLAS-------CIDRLVRAGRPTQVLGFFERMERDYG 194
+H +D + E +G K LA I+ + G + L FE M R G
Sbjct: 628 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR-RG 686
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAK 253
+ + ++ L + G +KL + I PD + + LI G +D A
Sbjct: 687 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 746
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ EM + V YN ++ + L R EA K++ +M G+ ++ T+
Sbjct: 747 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV-------DEARKLIDEMTERGIQPDLVTY 799
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LIS +DA+++ M G +P T+ LI+ L + + + + M+ M
Sbjct: 800 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 859
Query: 374 AGYAIGKKDYYEFLTRL 390
G Y + L
Sbjct: 860 NGITPDDSTYISLIEGL 876
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
GF D+ + ++ LC G A +L + A ++ PD + + L+KG C G + A
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 404
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ EM G YN I ++ LC+ + S+A V+ D G +V T
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNII---INGLCKMGNI----SDAAVVMNDAIVKGYLPDVFT 457
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI CK + + A++L RM +G P+ T+ ++ L +A + E +E + M
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + C I ++E+A V +M DG PD+ +++ L+ +C + +D
Sbjct: 518 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLD 577
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A LF + G + +
Sbjct: 578 GAYLLFQKLDEKGYSATADTFNI 600
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 135/293 (46%), Gaps = 11/293 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T S I+ L G + L F E +D K D +V+ LC G +A +++
Sbjct: 352 TYCSLINGLCAEGDIERALELFNEAQAKD--LKPDLVVYNSLVKGLCRQGLILHALQVMN 409
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ E PD +++I G C G + +A + + G+ +N ++D C
Sbjct: 410 EMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLID---GYC 466
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++ +LDS A +++ M G+ +V T+N +++ LCK ++++ + F M GC
Sbjct: 467 KR---LKLDS-ALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 522
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ +LI++ + ++ E +I RM G + + C ++ A +
Sbjct: 523 PNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLL 582
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
F+K+ G++ ++T+++L+ + + + A +F E + G + YR+
Sbjct: 583 FQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRI 635
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 135/337 (40%), Gaps = 46/337 (13%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTL----ASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
GR D A L + L P +L + I RAGR + FERM+ +
Sbjct: 49 GRLDDVDAA---LASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDL-FACPP 104
Query: 198 DKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+ +++ L Y A K+ V+ A + PD + + +K +C+ G+ A RL
Sbjct: 105 AAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLL 164
Query: 257 REMYRGGFELGTVAYNCIL--------------------------------DCVSKLCRK 284
R + G + AY ++ + + LC+K
Sbjct: 165 RSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQK 224
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D + KVL G+ N T N+ I LC+ R E+A+ L RMG + P+
Sbjct: 225 GDVMESGALLAKVL----KRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPD 279
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ L++ L + ++V E + + RM + G Y + C +++A + +
Sbjct: 280 VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
G PD TY L+ CA +++A LF+EA
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA 376
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 116/299 (38%), Gaps = 46/299 (15%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G +K + + + LCE+G A LV+ + PD + L++G C D K+ EA
Sbjct: 241 GMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAA 300
Query: 254 RLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
+ M G YN I+D C S + + EA ++L D + G +
Sbjct: 301 QYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ---------EATELLKDAVFKGFVPDRV 351
Query: 312 TFNVLISNLCKIRRSEDAIKLF-----------------------------------YRM 336
T+ LI+ LC E A++LF M
Sbjct: 352 TYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 411
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
E GCHP+ T+ ++I L + + + +++ GY + + C ++
Sbjct: 412 VEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKL 471
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ A+ + E+M T G PD TY+ ++ C + + N F+E + G Y +
Sbjct: 472 DSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 530
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 128/327 (39%), Gaps = 32/327 (9%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-A 226
S + L R G L M + G D + +++ LC+ G S A ++ D
Sbjct: 390 SLVKGLCRQGLILHALQVMNEMVEE-GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIV 448
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
PD + LI G+C KLD A +L M+ G + YN +L+ + K + K+
Sbjct: 449 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKE 508
Query: 287 --------------PFRLD--------------SEAEKVLLDMEYNGVPRNVETFNVLIS 318
P + EA V++ M +G+ + +FN LI
Sbjct: 509 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIH 568
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C+ + A LF ++ E G TF +LI + + +++ M S GY
Sbjct: 569 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 628
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC +++A + +M + G P T+ ++ ++RV +A A+
Sbjct: 629 DLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAII 688
Query: 439 DEAVRNGV--EVKPKEYRVDPRYLKKP 463
VR GV EV D + + P
Sbjct: 689 HIMVRMGVVPEVVDTILSTDKKEIAAP 715
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 11/250 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLA 256
D + V+ LC+ G + L+ +K C++ I+G C DG+L+EA L
Sbjct: 210 DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV 269
Query: 257 REMYRGGFEL-GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
M G + V YN ++ LC+ EA + L M G + T+N
Sbjct: 270 ERM--GAYVAPDVVTYNTLM---RGLCKDSKV----QEAAQYLGRMMNQGCIPDDFTYNT 320
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I CK ++A +L G P+ T+ LI L + E+ + ++
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC I A+ V +M +G +PD TY++++ C + A
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440
Query: 436 ALFDEAVRNG 445
+ ++A+ G
Sbjct: 441 VVMNDAIVKG 450
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 19/264 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + + L ERM YG D + V+ LC+ G A K V +
Sbjct: 457 TFNTLIDGYCKRLKLDSALQLVERM-WTYGIAPDVITYNSVLNGLCKAGKA----KEVNE 511
Query: 225 TANEIF-----PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
T E+ P+ ++LI+ +C +L+EA + M + G V++N + +
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTL---IH 568
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
CR D LD A + ++ G +TFN+LI + A K+F M
Sbjct: 569 GFCRNGD---LDG-AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK 624
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ T+ +L+ L +AA V + M S G+ + L L R+ +A
Sbjct: 625 GYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEA 684
Query: 400 MSVFEKMKTDGHNPDSETYDLLMT 423
+++ M G P E D +++
Sbjct: 685 VAIIHIMVRMGVVP--EVVDTILS 706
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 10/181 (5%)
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
AYN I+D + +A KV + M GV + T V + + C R A
Sbjct: 108 AYNAIMDALVNAAYH-------DQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVA 160
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
++L + E GC + +++ LY + D M + L
Sbjct: 161 LRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHA 220
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
LC + ++ ++ K+ G + + T ++ + C R+++A AL + R G V
Sbjct: 221 LCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVE---RMGAYVA 277
Query: 450 P 450
P
Sbjct: 278 P 278
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 12/288 (4%)
Query: 170 IDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTAN 227
+D L ++G + GFF E + R + D S + ++ CENG S E L +
Sbjct: 80 LDLLAKSGNLDRTWGFFTEYLGRT---QFDVYSFWITIKAFCENGNVSKGFELLAQMETM 136
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ P+ I +LI+ C +G +D+AK + M G Y +++ K KKD
Sbjct: 137 GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDG 196
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
F L + M+ GV N+ T+N LI+ C+ + A K+F + + G N T
Sbjct: 197 FELYQK-------MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +LI L + +V + + +++RMK A + + + LC ++++A+S EK+K
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G P TY++L++ + + L E G+ Y +
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTI 357
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 140/347 (40%), Gaps = 29/347 (8%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKD-----FKAIHDFLVDNKEVLGPKTLAS--- 168
FN+ L A + D T FFT+Y GR + + I F + G + LA
Sbjct: 76 FNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFWITIKAFCENGNVSKGFELLAQMET 135
Query: 169 ------------CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
I+ R G Q F RM+ D G ++ +++ + GY
Sbjct: 136 MGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD-DLGLAANQYIYTIMINGFFKKGYKK 194
Query: 217 YAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
+L K + P+ + LI +C DGKL A ++ E+ + G V YN +
Sbjct: 195 DGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNIL- 253
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ LCRK S+AE +L M+ + TFN+L+ LC + + A+ +
Sbjct: 254 --IGGLCRKGQV----SKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEK 307
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
+ G P T+ +LI + E++ M+ G + K Y + +
Sbjct: 308 LKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDD 367
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
IE+A +F MK G PD TY +L+ C + +A+ L+ V
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMV 414
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 167/394 (42%), Gaps = 44/394 (11%)
Query: 66 SLSGELLENLEADPLPISQRL------HLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNH 119
+L GEL E+L + + +S+ L + FSH P TL F AG
Sbjct: 52 NLQGELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPI-----QTLEFYRYAG-------- 98
Query: 120 WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNK----EVLGPKTLASCIDRLVR 175
F H+ +L GR + F I + L++ K ++ P+T+ + R+ +
Sbjct: 99 ---ARRGFYHSSFSLDTMLYILGRNRKFDQIWEILIETKRKDRSLISPRTMQVVLGRVAK 155
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI 235
Q + F + +R D ++ LC+ + A + ++ PD +
Sbjct: 156 LCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQT 215
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
++L+ GW K E E +G G + V YN ++D K D E
Sbjct: 216 FNILLSGW----KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK----------DREI 261
Query: 295 EKV--LLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EK L+D M +V T+ +I L I + + A ++ M E+GC+P+ +
Sbjct: 262 EKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAA 321
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I++ A R+G+ D+++D M G + Y F L + ++ ++E+M +G
Sbjct: 322 IRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYERMLGNGC 381
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P++++ L+ + H +VD A L+++ V G
Sbjct: 382 LPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 415
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 12/258 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI-FPDDKICDLLIKGWCVDGKLDEA 252
G K D + +++ C++ A KL+ E PD +I G + G+ D+A
Sbjct: 240 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQPDKA 299
Query: 253 KRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+ + +EM G AYN + C+++ RL +A+K++ +M G+ N
Sbjct: 300 REVLKEMKEYGCYPDVAAYNAAIRNYCIAR--------RL-GDADKLVDEMVKKGLSPNA 350
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N+ L + +L+ RM GC PN + + LIK + +V + +
Sbjct: 351 TTYNLFFRVLSLANDLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWED 410
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G+ L LC + ++E+A +M GH P + ++ + N+
Sbjct: 411 MVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANK 470
Query: 431 VDKANALFDEAVRNGVEV 448
D+ N L + G E+
Sbjct: 471 HDEVNNLIQKMAIFGTEI 488
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T A +D L + GR + FF+ M R G K D +++ G S +
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRK-GIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + P+ +I +++ + ++EA + +M + G V++ ++D + KL R
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D ++ M GV N+ F+ L+ LC + + E A +LF+ + + G
Sbjct: 387 VDDAVLQFNQ-------MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICV 439
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ F L+ +L RV E +ID M G Y + C RI++A +
Sbjct: 440 DAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLL 499
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ M ++G P+ TY +L+ +C RVD A +LF E + GV
Sbjct: 500 DVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGV 542
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 13/286 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA--N 227
I + G+ +V+ E M +G + D + L+++ LC+NG A +L D+
Sbjct: 238 IHGYLSTGKWKEVVQMLEEMS-THGLEPDCITYALLLDYLCKNGRCREA-RLFFDSMFRK 295
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
I PD I +L+ G+ G L E M G +N I+ C KK
Sbjct: 296 GIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFN-IMFCAYA---KK-- 349
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ EA + M G+ +V +F LI LCK+ R +DA+ F +M G PN
Sbjct: 350 -AMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFV 408
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F L+ L + + +E+ + G + + + LC R+ +A + + M
Sbjct: 409 FSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMI 468
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G P+ +Y+ L+ C R+D+A L D V NG +KP E+
Sbjct: 469 RVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG--LKPNEF 512
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 142/322 (44%), Gaps = 11/322 (3%)
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYG 194
F Y + +A+H F ++ L P ++ + ID L + GR + F +M + G
Sbjct: 343 FCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINE-G 401
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAK 253
+ +V LC G AE+L + ++ I D + L+ C +G++ EA+
Sbjct: 402 VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQ 461
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
RL M R G ++YN + V+ C R+D EA K+L M NG+ N T+
Sbjct: 462 RLIDLMIRVGVRPNVISYNTL---VAGHCLTG---RID-EAAKLLDVMVSNGLKPNEFTY 514
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+L+ CK RR +DA LF M G P T+ ++ L+Q R E +E+ M +
Sbjct: 515 TILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMIN 574
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
+ Y L LC +++A +F ++ + DS T+++++ R +
Sbjct: 575 SRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKED 634
Query: 434 ANALFDEAVRNGVEVKPKEYRV 455
A LF G+ YR+
Sbjct: 635 AMDLFATISAYGLVPDVVTYRL 656
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 125/292 (42%), Gaps = 25/292 (8%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL--RLVVEKLC-----ENGYASYA 218
L + + R + +V+ F RM R+ K ++ +++ C E+G+A++
Sbjct: 55 LLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFG 114
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKR-LAREMYRGGFELGTVAYNCILDC 277
L+ T + + + L+KG C ++DEA L M G VAYN +++
Sbjct: 115 --LILKTGWRV--NVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVIN- 169
Query: 278 VSKLCRKKDPFRLDSEAEK---VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
F + + EK + L+M G+P NV T+ +I LCK + + A +F
Sbjct: 170 ---------GFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQ 220
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+M + G P+ T+ LI + E +M++ M + G Y L LC
Sbjct: 221 QMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNG 280
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
R +A F+ M G PD Y +L+ + + + ++ D V NGV
Sbjct: 281 RCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGV 332
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 13/205 (6%)
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y+ ++ C ++ R + F A ++L G NV + L+ LC +R ++A
Sbjct: 93 YSILIGCFCRMGRLEHGF----AAFGLILK---TGWRVNVIVISQLLKGLCDAKRVDEAT 145
Query: 331 K-LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
L RM E+GC P+ + +I ++ +V + + M G Y +
Sbjct: 146 DILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDG 205
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
LC + +++A VF++M G PD+ TY+ L+ + + + + + +E +G+E
Sbjct: 206 LCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPD 265
Query: 450 PKEYRVDPRYLKKPIAVKKGKKRET 474
Y + YL K G+ RE
Sbjct: 266 CITYALLLDYL-----CKNGRCREA 285
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 30/282 (10%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFP 231
L GR + + M R G + + S +V C G A KL+ +N + P
Sbjct: 451 LCNEGRVMEAQRLIDLMIR-VGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKP 509
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL- 290
++ +L++G+C ++D+A L REM G YN IL + + R + L
Sbjct: 510 NEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELY 569
Query: 291 ------DSEAEKVLLDMEYNGVPRN---------------------VETFNVLISNLCKI 323
++ + ++ NG+ +N TFN++I L K
Sbjct: 570 LNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKG 629
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R EDA+ LF + +G P+ T+ ++ ++L + +GE D + M+ +G A
Sbjct: 630 GRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHML 689
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+ RL I +A K+ + ++ T +L++ +
Sbjct: 690 NALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLY 731
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 131/341 (38%), Gaps = 27/341 (7%)
Query: 117 FNHWLTQNANFSHTDETLSFFT--DYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV 174
F LT A H LS T D FG D ++ L + L
Sbjct: 115 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN-------------ILINSFCHLR 161
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDD 233
R G VL ++ G + D + ++ LC G A L T E F PD
Sbjct: 162 RLGYAFSVLAKLLKL----GCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDV 217
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
L+ G C G A RL R M + +AYN I+D LC+ + +E
Sbjct: 218 VTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID---SLCKDRQV----TE 270
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A + +M G+ ++ T+N LI LC + + L M PN F ++
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+L + + +++D M G Y + C +++A+ VF+ M G P
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ +Y++L+ +C R+DKA L ++ G+ Y
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYN 431
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 131/302 (43%), Gaps = 15/302 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L G+ + L F++ + GF+ D + ++ LC+ G S A +L++
Sbjct: 184 TFNTLIRGLCVEGKIGEALHLFDKTIGE-GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRS 242
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ + +I C D ++ EA L EM G YN ++ + LC
Sbjct: 243 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 302
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK---IRRSEDAIKLFYRMGEWG 340
K +L +M + + NV F+ ++ LCK I + D + + M + G
Sbjct: 303 WK-------HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDM---MIKRG 352
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ T+ L+ + + E ++ D M G + Y + C I+R+++AM
Sbjct: 353 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 412
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
+ E+M G D+ TY+ L+ C R+ A ALF E V +G YR+ YL
Sbjct: 413 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 472
Query: 461 KK 462
K
Sbjct: 473 CK 474
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 11/286 (3%)
Query: 163 PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
P +A + ID L + + T+ F M G D + ++ LC +
Sbjct: 250 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK-GISPDIFTYNSLIHALCNLCEWKHVTT 308
Query: 221 LVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L+ + N +I P+ + ++ C +G + A + M + G E V Y ++D
Sbjct: 309 LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMD--- 365
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
C + + EA KV M + G NV ++N+LI+ C+I+R + A+ L +M
Sbjct: 366 GHCLRSEM----DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 421
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G + T+ LI L R+ + M ++G Y L LC + +A
Sbjct: 422 GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEA 481
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M + + ++ + D Y++ + C ++ A LF G
Sbjct: 482 MVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I + G+++ A + M GF V +N +++ KL D A+
Sbjct: 429 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHD-------AKA 481
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
L + +G+ +V TF LI LC + +DA F M EWG PN T+ VLI L
Sbjct: 482 FLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLC 541
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMKTDGHNP 413
A V + E++++MK G D Y F + C + +IE+A +F M G +P
Sbjct: 542 SAGHVSKAIELLNKMKMDGIT---PDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSP 598
Query: 414 DSETYDLLMTKWCAHNRVDKANALF 438
DS TY+ L+ C RVD+A +
Sbjct: 599 DSYTYNALIKALCDERRVDEAKEII 623
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 198 DKDSLRLVVEKLCENGY--ASYAEKLVKDTANEIFPDDKICDL----------------- 238
DK+++ L +K+ + GY S +V A ++ +C+L
Sbjct: 336 DKEAVELA-KKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYI 394
Query: 239 -LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+IK + + +A + +M G +YN ++DC +K E E+
Sbjct: 395 MIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAK----------AGEVERA 444
Query: 298 LLD---MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
L M+ +G N+ TFN LI+ K+ DA + E G P+ TF LI
Sbjct: 445 LETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDG 504
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L ++ + M G + Y + LC + +A+ + KMK DG PD
Sbjct: 505 LCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPD 564
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +++ + +C +++KA LF++ R GV P Y
Sbjct: 565 AYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVS--PDSY 601
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 12/240 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID +AG + L + M+ + GF + + ++ + G A+ +K
Sbjct: 432 IDCFAKAGEVERALETIKVMQ-ESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHG 490
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD LI G C +LD+A EM G YN + + LC
Sbjct: 491 LMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVL---IHGLCSAGHV- 546
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
S+A ++L M+ +G+ + +FN I + C++R+ E A KLF M +G P+ T+
Sbjct: 547 ---SKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTY 603
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD--YYEFLTRLCGIERIEQAMSVFEKM 406
LIK+L RV E E+I M+S IG K Y+ + L + R +A K+
Sbjct: 604 NALIKALCDERRVDEAKEIILAMESIS-CIGTKQHTYWPVVGALTKMGRFSEAGMFMNKL 662
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGW 243
+F +M D G +S +V++ + G A + +K F P+ + LI G+
Sbjct: 412 YFSQMVSD-GLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGY 470
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
G + +AK + + G + + ++D + + D F SE M
Sbjct: 471 LKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSE-------MSE 523
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
GV NV+T+NVLI LC AI+L +M G P+ +F I S + ++ +
Sbjct: 524 WGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEK 583
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ + M G + Y + LC R+++A + M++
Sbjct: 584 AQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMES 628
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 12/309 (3%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPKTLA--SCIDRLVRAGRPTQVLGFF 186
++E L + +GR H+ V + L P T + I VRAG F
Sbjct: 144 SEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRF 203
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
++M D G + D + +V +C G A +LVK I P+ +L+ G+C
Sbjct: 204 QQMPAD-GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCN 262
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
+++EA + M G Y ++ + K+ +R+ SE +E +
Sbjct: 263 ASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEW------IESDP 316
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
++ ++ L+ L K ++A++L +M + G TTF ++I + +
Sbjct: 317 TLHSI-AYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLC 375
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
E++D G +G Y + + I +A F +M +DG E+Y++++ +
Sbjct: 376 ELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCF 435
Query: 426 CAHNRVDKA 434
V++A
Sbjct: 436 AKAGEVERA 444
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 7/205 (3%)
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA LA++M + G+ LG+ ++ ++ C K+ D L + D G
Sbjct: 338 EAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCEL-------VDDFIKKGGNLGF 390
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+ + ++I + + + A K F +M G + ++ ++I +A V E I
Sbjct: 391 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKV 450
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ +G++ + + + + A + + + G PD T+ L+ C ++
Sbjct: 451 MQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQ 510
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+D A F E GV + Y V
Sbjct: 511 LDDAFNCFSEMSEWGVRPNVQTYNV 535
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+ ++ D+ G + E L+ + ++ + A ++F ++ G P+ + +I
Sbjct: 129 SAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIA 188
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEKMKTDG 410
+ +A V +M + G + D + + T + G+ R +++A+ + ++M+ G
Sbjct: 189 ASVRAGAVDAAYLRFQQMPADGC---RPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAG 245
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
P+ TY +L+ +C +RV++A + + GV YR
Sbjct: 246 IRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYR 289
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 150/371 (40%), Gaps = 49/371 (13%)
Query: 106 FSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKT 165
+ P+AG F NA L +FG R ++ A ++ L
Sbjct: 7 YVPDAG--FFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLL----------- 53
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KD 224
+ L+ GR + FE +D + D S +V++ +C G A +LV +
Sbjct: 54 -----NTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERM 108
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCR 283
T PD ++L+ G C ++++ + R + R G + V Y ++ K R
Sbjct: 109 TEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGR 168
Query: 284 KKDPF-----------RLDSEAEKVL-------LDME----------YNGVPRNVETFNV 315
KD F R ++ VL LDME + P +V TFN
Sbjct: 169 MKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNS 228
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI C+ + +DA++++ MG+ PN TF ++I SL R E ++ +
Sbjct: 229 LIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRA 288
Query: 376 YAIGKKDYYE-FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ + Y + LC ++++A + M+ G +PD TY +L+ C R+ +A
Sbjct: 289 DIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEA 348
Query: 435 NALFDEAVRNG 445
LF + V G
Sbjct: 349 VTLFHKMVETG 359
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 12/245 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +++IKG C G L +A L M G T+ N ++D LCR K
Sbjct: 80 PDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVD---GLCRVKQV--- 133
Query: 291 DSEAEKVLLDMEYNGVPR-NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
++ +VL ++ +GV NV T+ +IS CK R +DA ++ M + G PN T+
Sbjct: 134 -NKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYN 192
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
VLI +A + M ++ + + C +++ AM ++ +M
Sbjct: 193 VLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQH 252
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
P+ T+ +++ C NR +A +L E + ++ P+ + +P I K G
Sbjct: 253 HIQPNVYTFSIIIHSLCTQNRSAEALSLLRE-LNMRADIVPQTFIYNPII---DILCKGG 308
Query: 470 KKRET 474
K E
Sbjct: 309 KVDEA 313
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + +++ C G A ++ + + I P+ ++I C + EA L
Sbjct: 222 DVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLL 281
Query: 257 REM-YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
RE+ R T YN I+D LC+ ++D EA ++ DME G + T+ +
Sbjct: 282 RELNMRADIVPQTFIYNPIID---ILCKGG---KVD-EANLIVTDMEEKGCHPDKYTYTI 334
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI C R +A+ LF++M E GC P+ T I + +A E +++ + ++G
Sbjct: 335 LIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAGMPNEVHQIM--LIASG 392
Query: 376 YA 377
+A
Sbjct: 393 HA 394
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 21/285 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKD------SLRLVVEKLCENGYASYAEKLVK 223
+D LV+ GR F+ M + YG + + +++ C G A +L
Sbjct: 165 LDGLVKKGR-------FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFD 217
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + IFP I +LI+G C + ++ EA+ + R M G YN ++D K+
Sbjct: 218 EMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIA 277
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
K L E M +G+ NV TF +LI LCK A K M +G
Sbjct: 278 HVKKALELYQE-------MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN + LI +A + E + ++ Y + LCG++R+E+A +
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++MK G P++ TY+ L+ +C ++KA + + G+E
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIE 435
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 21/256 (8%)
Query: 205 VVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G S A L + +EI PD +LIKG C +++EA L +EM + G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F V YN ++D C++ + +A +V M G+ N+ TF+ LI CK
Sbjct: 399 FLPNAVTYNTLID---GYCKEGNM----EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ E A+ L+ M G P+ + LI ++ E + M+ AG
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 384 YEFLTRLCGIERIEQAMSVF-EKMKTDGH------------NPDSETYDLLMTKWCAHNR 430
+ LC RI A+ +F K TD +P+ Y L+ C R
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571
Query: 431 VDKANALFDEAVRNGV 446
+ KA+ F + +G+
Sbjct: 572 IFKASKFFSDMRCSGL 587
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 8/236 (3%)
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVD 246
R R+ G + + +++ C+ + A +L ++ + + P+ +LI G C
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKT 311
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
++ A++ +M G YNC++D K + L SE EK + +
Sbjct: 312 DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK-------HEI 364
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T+++LI LC + R E+A L M + G PN T+ LI + + + E
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ +M G + + C ++E AM ++ +M G PD Y L+
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 136/341 (39%), Gaps = 27/341 (7%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASC-IDRLVRAGRPTQVLGFFERM 189
T D + + + FL+D V+ + +C ID +AG ++ L +
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGK 248
E+ + D + ++++ LC A+ L+++ + F P+ + LI G+C +G
Sbjct: 360 EK-HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGN 418
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+++A + +M G E + ++ ++D K + + L +E M G+
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE-------MVIKGLLP 471
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V + LI K +++A +L M E G HPN T LI L + R+ + ++
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Query: 369 DRMKSAGYAIGKKD--------------YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
K+ G K Y + LC RI +A F M+ G PD
Sbjct: 532 -LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
T +++ + L + ++ G+ YRV
Sbjct: 591 VFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 152/375 (40%), Gaps = 57/375 (15%)
Query: 117 FNHWLTQNANFSHTDET-------LSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLA-S 168
F W + + H E L+F D R F F + ++ +L ++ A S
Sbjct: 136 FFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVF-----FELKDRGLLMTESAANS 190
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
I G ++L + RM+ + G + +V L + + AEK+ +
Sbjct: 191 LIKSFGNLGLVEELLWVWRRMKEN-GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGG 249
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKR--------------------------------- 254
+I PD +++IKG+C GKL +A
Sbjct: 250 KIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTC 309
Query: 255 --LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L EM G E+ +Y+ + + LC+++ EA V M G NV
Sbjct: 310 LSLYLEMEERGLEIPPHSYSLV---IGGLCKQRKCM----EAYAVFETMNQKGCRANVAI 362
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ LI + K E+A++LF RM G P+ T+ VL+ L ++ R+ +G E+ D +
Sbjct: 363 YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 422
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G AI Y + L RIE A ++FE+M G DS Y+ ++ H ++D
Sbjct: 423 NKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKID 482
Query: 433 KANALFDEAVRNGVE 447
+A ALF G +
Sbjct: 483 QALALFGRMEEEGCD 497
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 10/287 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P + + I L + + + FE M + G + + +++ +NG A +L
Sbjct: 325 PHSYSLVIGGLCKQRKCMEAYAVFETMNQK-GCRANVAIYTALIDSYSKNGSMEEAMRLF 383
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ NE F PD +L+ G C G+LD+ L G + + Y ++D + K
Sbjct: 384 ERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKA 443
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R +D AE + +M G R+ +N +I L K + + A+ LF RM E GC
Sbjct: 444 GRIED-------AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGC 496
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
TF +LI L++ + E + D+M G + LC ++ +A
Sbjct: 497 DQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACK 556
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+ + + G P++ D++ T C R+ +A L D V G E+
Sbjct: 557 ILDDLAPMGIIPETAFEDMINT-LCKAQRIKEACKLADGIVDRGREI 602
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 7/217 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+I G C K EA + M + G Y ++D SK ++ RL
Sbjct: 330 LVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFER---- 385
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M+ G + T++VL++ LCK R +D ++LF G N + LI L +
Sbjct: 386 ---MKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGK 442
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
A R+ + + + + M G A Y + L +I+QA+++F +M+ +G + T
Sbjct: 443 AGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYT 502
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ +L+ ++ ++A +D+ + G+ +R
Sbjct: 503 FTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFR 539
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 42/250 (16%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LIK + G ++E + R M G + YN +++ + + ++S AEKV
Sbjct: 191 LIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV------NSMFIES-AEKVF 243
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ + + T+N++I CK + + A++ F M P++ T++ LI++ Y
Sbjct: 244 EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE 303
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER----------------------- 395
+ M+ G I Y + LC +
Sbjct: 304 RDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIY 363
Query: 396 ------------IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+E+AM +FE+MK +G PD+ TY +L+ C R+D LFD
Sbjct: 364 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN 423
Query: 444 NGVEVKPKEY 453
GV + Y
Sbjct: 424 KGVAINAMFY 433
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%)
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
V +++ G+ N LI + + E+ + ++ RM E G P+ T+ L+ L
Sbjct: 172 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ + +++ + M Y + C ++++AM F M+ PD
Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 291
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY L+ + D +L+ E G+E+ P Y +
Sbjct: 292 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL 330
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 86/237 (36%), Gaps = 43/237 (18%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + DF + + AS ID L +AGR FE M
Sbjct: 409 GRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMS----------- 457
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
EK C A + + + I D L K GK+D+A L M
Sbjct: 458 -----EKGC---------------ARDSYCYNAIIDALAK----HGKIDQALALFGRMEE 493
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G + + ++D + K + + EA K M G+ V +F L LC
Sbjct: 494 EGCDQTVYTFTILIDGLFKEHK-------NEEAIKFWDKMIDKGITPTVASFRALAIGLC 546
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
+ A K+ + G P ET F +I +L +A R+ E ++ D + G I
Sbjct: 547 LCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRIKEACKLADGIVDRGREI 602
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 205 VVEKLCENGYASYAEKLVKD--TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++ LC NG A +L ++ + ++I PD +LIKG+C GK D A+++ M
Sbjct: 241 LIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSN 300
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + Y+ +++ C++ RL+ EA++V +M+ +G+ + + LI+ C
Sbjct: 301 GCDPNVFNYSVLMN---GFCKEG---RLE-EAKEVFDEMKSSGLKPDTVGYTTLINCFCG 353
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ R ++A++L M E C + TF VL+K L + R E M++ + G + K
Sbjct: 354 VGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGS 413
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y L LC +E++ ++ M + G P T + L+ C VD A
Sbjct: 414 YRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLT 473
Query: 443 RNGVEVKPKEY 453
+ G +PK +
Sbjct: 474 QMGFTPEPKSW 484
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 8/279 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L GR + + FE M D + ++++ C G A A K+++
Sbjct: 237 TYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEF 296
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+N P+ +L+ G+C +G+L+EAK + EM G + TV Y +++C +
Sbjct: 297 MRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGV-- 354
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R+D EA ++L +M + TFNVL+ LC+ R ++A+++ + G +
Sbjct: 355 ----GRID-EAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYL 409
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N+ ++ +++ L Q + + ++ M S G+ E L LC ++ A++
Sbjct: 410 NKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTAL 469
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ G P+ +++ L+ C ++ L DE V
Sbjct: 470 FGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDELV 508
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 148/354 (41%), Gaps = 32/354 (9%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASC----------IDR 172
+ F+H T S + K F A+ +L T +C +
Sbjct: 84 EQKGFNHNHATYSTLIHKLAQTKKFHAV-------DALLHQMTYETCKFHENIFLNLMKH 136
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV---VEKLCENGYASYAEK--LVKDTAN 227
++ +VL F ++ R+K SL+ + + L E+ A+K L +
Sbjct: 137 FYKSSLHERVLEMFYAIQ---PIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHL 193
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCRKKD 286
++ P+ I ++L+K C G L+ A + EM + + Y+ ++D + R K+
Sbjct: 194 KVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKE 253
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
L E + + + + T++VLI C +++ A K+ M GC PN
Sbjct: 254 AIELFEEM------VSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVF 307
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ VL+ + R+ E E+ D MKS+G Y + CG+ RI++AM + ++M
Sbjct: 308 NYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEM 367
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
D+ T+++L+ C R D+A + + GV + YR+ +L
Sbjct: 368 TEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFL 421
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 145/344 (42%), Gaps = 34/344 (9%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE------VLGPKTLAS 168
L F W+ N FSH +++ ++ GR ++ A +FL ++ L + S
Sbjct: 88 LRFFDWV-YNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNS 146
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
I AG + + F+ M++ G + ++ L + G A + +
Sbjct: 147 LIRSYGNAGLFQESVNLFQTMKK-MGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRT 205
Query: 229 --IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD + LI G+C + +D+A + +EM V YN I+D + + + K
Sbjct: 206 YGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKI 265
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
L + K + V N+ ++ L+ C + ++A+ +F+ M G PN
Sbjct: 266 AHNLLNGMLK-----KATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAV 320
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF----------LTRLCGIERI 396
T+ LIK L +A R D +K G+ IG + F + C +
Sbjct: 321 TYNTLIKGLSEAHRY-------DEIK--GFLIGGDAFTTFSPDACTFNILIKAHCDAGHL 371
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ AM VF++M +PDS +Y +L+ C N DKA LF+E
Sbjct: 372 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNE 415
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 121/304 (39%), Gaps = 24/304 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I + Q F+ ME Y D + +++ LC G A L+
Sbjct: 214 TFNTLISGFCKNSMVDQAFTIFKEMEL-YSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNG 272
Query: 225 T---ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
A + P+ L++G+C+ ++DEA + EM G + V YN ++ +S+
Sbjct: 273 MLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEA 332
Query: 282 CRKKD--PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
R + F + +A + + TFN+LI C + A+K+F M
Sbjct: 333 HRYDEIKGFLIGGDA--------FTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM 384
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD-------YYEFLTRLCG 392
HP+ ++ VLI++L + + + + + +GK + Y LC
Sbjct: 385 KLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCA 444
Query: 393 IERIEQAMSVFEK-MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+ +QA VF + MK +P S Y L+T C + A L +R P+
Sbjct: 445 NGKAKQAEKVFRQLMKRGAQDPSS--YRTLITGLCREGKFKAAYELLVLMLRREFVPDPE 502
Query: 452 EYRV 455
Y V
Sbjct: 503 TYEV 506
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 15/268 (5%)
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE----NGYASYAEKLVKDTAN 227
RL++ P L FF+ + + GF + S L++E L N ++ + K +
Sbjct: 79 RLIKV--PADGLRFFDWV-YNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNG 135
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ D+ + LI+ + G E+ L + M + G + +N +L + K R
Sbjct: 136 CVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMA 195
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ E + GV + TFN LIS CK + A +F M + C+P+ T
Sbjct: 196 HDMFDEMRRTY------GVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVT 249
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK--DYYEFLTRLCGIERIEQAMSVFEK 405
+ +I L +A +V +++ M A+ Y L C + I++A+ VF +
Sbjct: 250 YNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHE 309
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDK 433
M T G P++ TY+ L+ +R D+
Sbjct: 310 MLTRGLKPNAVTYNTLIKGLSEAHRYDE 337
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI + ++++ LF M + G P+ TF L+ L + R G +M D M+
Sbjct: 144 FNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMR 203
Query: 373 SAGYAIGKKDYYEFLTRLCGI---ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
Y + D Y F T + G ++QA ++F++M+ NPD TY+ ++ C
Sbjct: 204 RT-YGV-TPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAG 261
Query: 430 RVDKANALFDEAVRNGVEVKP 450
+V A+ L + ++ V P
Sbjct: 262 KVKIAHNLLNGMLKKATAVHP 282
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 116/281 (41%), Gaps = 13/281 (4%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
L+ E LC NG A AEK+ + D LI G C +GK A L M R
Sbjct: 437 LMFEYLCANGKAKQAEKVFRQLMKRGAQDPSSYRTLITGLCREGKFKAAYELLVLMLRRE 496
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F Y ++D + K+ L + + +L Y V TF+ +++ L K
Sbjct: 497 FVPDPETYEVLIDGLLKIGEA----LLAHDTLQRMLRSSYLPVA---TTFHSVLAELVKR 549
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ + D+ L M E N ++ ++ +A+ + ++ + GY I ++
Sbjct: 550 KFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVRLLYDNGYLIKMEEL 609
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+F LC ++ A ++ D +T + ++ C H R +A +L++E V
Sbjct: 610 LDF---LCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRHSEAFSLYNELVE 666
Query: 444 NGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRR 484
G + + V L+ A K ++ + + ++MA R+
Sbjct: 667 LGNHQQLSCHVVLTNALE---AAGKWEELQFVSKRMATMRK 704
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 10/229 (4%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+++VKD + P+ LI G C +G+L+EA + EM + G E Y L
Sbjct: 261 DRMVKDGCD---PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPL--- 314
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC SEA ++L M+ G N++TF LIS L + + E AI L+++M
Sbjct: 315 VSLCDAG----CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA 370
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P T+ LI L R + M S G + Y E + C + I++
Sbjct: 371 DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
AM +F+KM G +P+ TY+ L+ +C ++ A L + NG++
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 9/211 (4%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P + +++I G+ + EA+ +M + G + Y +D + + R F+
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA--IKLFYRMGEWGCHPNETT 347
+ E EK N P N+ T++ LI LC+ R+EDA L R+ +GC PN T
Sbjct: 609 IFHEMEK------RNYFP-NLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDT 661
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+K L R E D+++ M+ G ++ Y L C ++E A+++F M
Sbjct: 662 YTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMD 721
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
T G Y L+ C N +++A +F
Sbjct: 722 TLGFQLHLSDYKALICALCKENFIEEAQCIF 752
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 20/289 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLR-------LVVEKLCENGYASY 217
TL S L++ G+ V + RD K +R ++ LC+ G
Sbjct: 166 TLCSFTTLLIQLGKFDMV-----DLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQE 220
Query: 218 AEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A+ ++ + +P+ LI G C + LD A + M + G + +V Y+ +
Sbjct: 221 AKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL-- 278
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
++ LC + RL+ EA +L +M G+ V T+ + + +LC S +A++L +M
Sbjct: 279 -INGLCSEG---RLE-EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ GC PN TF LI L + + + +M + G Y + +LC R
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
E A ++F+ M + G P ++TY+ ++ +C + KA +FD+ ++ G
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 9/278 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + I L R G+ +G + +M D G + ++ +LC G A + K
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLAD-GLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
++ P + + +IK +C+ G + +A + +M + G + YN + + C
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL---IYGYC 458
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
++ + + A ++L M+ NG+ + T+ LIS + + E A LFY M E G
Sbjct: 459 KQGNL----NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ +I + A+V + + +M +G + Y ++ I +A +
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
KM G P+ TY + C + R A +F E
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVK 223
T ++ I+ L GR + + E M + G + + + + LC+ G +S A E L K
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAGCSSEAVELLGK 332
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ + LI G DGK + A L +M G TV YN + +++LC
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL---INQLCV 389
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ R ++ A + M +G + +T+N +I C + + A+ +F +M + G P
Sbjct: 390 EG---RFET-AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ LI + + +++ MK G Y E ++ ++E A S+F
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M G +P+ TY ++ + +VD A ALF + V +G + Y V
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 130/344 (37%), Gaps = 32/344 (9%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + I +++ + + +T I G + + F++M + G + +
Sbjct: 391 GRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA-GSSPNVIT 449
Query: 202 LRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ C+ G + A +L++ N + PD LI G+ GKL+ A L M
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRL----------------------------DS 292
G V Y I+D L + D L S
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EAE M G+ NV T+ I LC+ R+ A K+F+ M + PN T+ LI
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629
Query: 353 KSLYQAARVGEGD--EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L Q R + + ++ R+ G Y + LCG R +A + M+ G
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
P E Y L+ C + +V+ A +F G ++ +Y+
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYK 733
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 155/388 (39%), Gaps = 67/388 (17%)
Query: 77 ADPLPISQRLHLIFSHVTPTPSLVQ--STLNFSPEAGRAI--------LGFNHWLTQNAN 126
+ PLPIS S P P LV ST+ SP+ + L +H +
Sbjct: 35 SSPLPIS-------STTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQT 87
Query: 127 FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFF 186
+TD L FF + RRK FK HD S ++RLVR
Sbjct: 88 HKNTDSVLRFFF-WISRRKFFK--HDM----------SCFVSMLNRLVR----------- 123
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANEIFPDDKICD---LLIKG 242
+R + D +R+++ K C N G + + + ++ +C LLI+
Sbjct: 124 ---DRLFA---PADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQ- 176
Query: 243 WCVDGKLDEAKRLAREMY----RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
GK D LAR+MY G + +N +++ + K R ++ + S
Sbjct: 177 ---LGKFDMVD-LARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI---- 228
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
Y+ P N T+ LI C+ + A +F RM + GC PN T+ LI L
Sbjct: 229 --FRYDAYP-NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E +M++ M G Y L LC +A+ + KMK G P+ +T+
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
L++ + + A L+ + + +G+
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGL 373
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 102/259 (39%), Gaps = 7/259 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + L F +M G + +++ + S AE
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVES-GNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ I G C +G+ A ++ EM + + Y+ + + LC+
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL---IYGLCQ 634
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ D+E +L + + G NV+T+ L+ LC R +A +L M + G P
Sbjct: 635 EGRA--EDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E + L+ + +V + M + G+ + DY + LC IE+A +F
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752
Query: 404 EKMKTDGHNPDSETYDLLM 422
+ M N D + +L+
Sbjct: 753 QTMLEKHWNSDEVVWTVLL 771
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 64/300 (21%)
Query: 161 LGPKTLASCIDRLVRAGRPT-QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
L PK + +++ + T VL FF + R FK D + S
Sbjct: 72 LSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSC------------FVSMLN 119
Query: 220 KLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREM---YRGGFELGTVAYNCIL 275
+LV+D +F P D + L+IK +G++ + E+ Y G+ L +
Sbjct: 120 RLVRD---RLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSF------ 170
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ L + F + A + + M +G+ ++ TFN +I+ LCK R ++A +
Sbjct: 171 ---TTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSH 227
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
+ + +PN T+ LI +G C
Sbjct: 228 IFRYDAYPNAFTYTSLI-------------------------LGH----------CRNHN 252
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ A ++F++M DG +P+S TY L+ C+ R+++A + +E V+ G+E Y +
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 17/247 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK---L 221
T S ID L R GR F ME+ F + + ++ LC+ G A AE L
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFP-NLYTYSSLIYGLCQEGRAEDAEMYNLL 647
Query: 222 VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ T P+ L+KG C +G+ EA +L M + G + Y +L K
Sbjct: 648 ARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECK- 706
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+++S A + M+ G ++ + LI LCK E+A +F M E
Sbjct: 707 -----NLKVES-ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHW 760
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL----CGIE--R 395
+ +E + VL+ L + +++ M+S + + Y L C I+ +
Sbjct: 761 NSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQ 820
Query: 396 IEQAMSV 402
I Q + +
Sbjct: 821 ISQQLGI 827
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 9/293 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ PD +I G+C +G +DEA L
Sbjct: 403 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 462
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G + T++Y +L + R D AE ++ M G P N TFN L
Sbjct: 463 KSMTACGCKPNTISYTIVLKGLCSAERWVD-------AEDLMSQMIQQGCPLNPITFNTL 515
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 516 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 575
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + L RI + + +F+ ++ D+ Y+ +++ C ++A
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 635
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET-LPEKMARKRRRLKQ 488
V +G Y + R L VK+ ++ T L K A ++ +K
Sbjct: 636 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 688
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
+ L GR L + M R G +++E C G A ++++D A
Sbjct: 166 VRALCARGRIADALAVLDEMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 224
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
D C+L++ C G +DEA L R++ G E V+YN +L LC K
Sbjct: 225 CALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK---GLCMAK--- 278
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R ++++ +M P N+ TFN LIS LC+ E ++ +M E GC P+ +
Sbjct: 279 RWGC-VQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMY 337
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I + + + E+++RM S G Y L LC ER E+ + +M
Sbjct: 338 ATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 397
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
D T+++L+ +C + VD+ L ++ + +G
Sbjct: 398 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 8/242 (3%)
Query: 205 VVEKLCENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC NG + E L + + PD ++ +I G C +G L+ A + M G
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V YN +L LC + R + E E++L +M P + TFN+L+ C+
Sbjct: 365 LKPNVVCYNTLLK---GLCSAE---RWE-ETEELLAEMFDKDCPLDDVTFNILVDFFCQN 417
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ I+L +M E GC P+ T+ +I + + E ++ M + G Y
Sbjct: 418 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 477
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
L LC ER A + +M G + T++ L+ C V++A L + +
Sbjct: 478 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 537
Query: 444 NG 445
NG
Sbjct: 538 NG 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 116/301 (38%), Gaps = 35/301 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G D + LV+ +C+ G A L++D + PD + ++KG C+ +
Sbjct: 224 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 283
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE------------------- 293
+ L EM R V +N + +S LCR R+
Sbjct: 284 QELMEEMVRMACPPNIVTFNTL---ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 340
Query: 294 ------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
A ++L M G+ NV +N L+ LC R E+ +L M + C
Sbjct: 341 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 400
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
++ TF +L+ Q V E++++M G Y + C I++A+
Sbjct: 401 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 460
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ + M G P++ +Y +++ C+ R A L + ++ G + P + +L
Sbjct: 461 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 520
Query: 462 K 462
K
Sbjct: 521 K 521
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 60/138 (43%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
VP N T+ ++ LC R DA+ + M GC P + V++++ +
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+++ + + G A+ + L +C +++A+ + + + G PD +Y+ ++
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274
Query: 426 CAHNRVDKANALFDEAVR 443
C R L +E VR
Sbjct: 275 CMAKRWGCVQELMEEMVR 292
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +++ C+ + E A +L + PN T+ ++++L R+ + ++D M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPV---PPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G A Y+ L C A+ V E + G D +L++ C VD
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
+A L + G E Y LK K+ + L E+M R
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNA---VLKGLCMAKRWGCVQELMEEMVR 292
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 9/278 (3%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L+ +D + A + VL E M+ G K + + V+ LC+ G + AE+++++
Sbjct: 191 LSEDLDGIKIALKGEWVLKLIEEMQIK-GLKPNPYTYNGVILLLCKTGKVAEAERVLREM 249
Query: 226 ANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+E I PD I LI G+C G + A RL EM + + Y + + LC+
Sbjct: 250 ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAV---ICGLCQT 306
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
EA+K+ +M + + T+ LI CK + ++A L +M + G PN
Sbjct: 307 GRVM----EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 362
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ L L + V +E++ M G + Y + LC I+QA+ + +
Sbjct: 363 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 422
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
M+ G +PD+ TY LM +C + +A+ L + +
Sbjct: 423 DMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 460
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 123/320 (38%), Gaps = 44/320 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
ID + G + F+ M++ D + V+ LC+ G A+KL +
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD+ LI G+C +GK+ EA L +M + G V Y + D + K C + D
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK-CGEVDT- 381
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT- 347
A ++L +M G+ N+ T+N L++ LCK + A+KL M G HP+ T
Sbjct: 382 -----ANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 436
Query: 348 ----------------------------------FLVLIKSLYQAARVGEGDEMIDRMKS 373
F VL+ + + +G++++ M
Sbjct: 437 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 496
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + + C + ++ M G PD TY++L+ C + +
Sbjct: 497 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 556
Query: 434 ANALFDEAVRNGVEVKPKEY 453
A L + V G + Y
Sbjct: 557 AWFLHRDMVGKGFNLTVSSY 576
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 24/257 (9%)
Query: 214 YASYAEKLVK----DTANEIFPDDKIC-----------DLLIKGWCVDGKLDEAKRLARE 258
Y + A+ L K DTANE+ + +C + L+ G C G +D+A +L ++
Sbjct: 366 YTALADGLCKCGEVDTANELLHE--MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 423
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M GF V Y ++D C+ ++ R A ++L M + V TFNVL++
Sbjct: 424 MEVAGFHPDAVTYTTLMD---AYCKSREMVR----AHELLRQMLDRELQPTVVTFNVLMN 476
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C ED KL M E G PN TT+ LIK + E+ M + G
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 536
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A + M G N +Y+ L+ + + +A LF
Sbjct: 537 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 596
Query: 439 DEAVRNGVEVKPKEYRV 455
++ R G+ + Y +
Sbjct: 597 EQMRREGLVADREIYNI 613
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 7/200 (3%)
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+L EM G + YN + + LC+ +EAE+VL +M G+ + +
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGV---ILLLCKTGKV----AEAERVLREMISEGIAPDGVIY 261
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
LI CK+ A +LF M + P+ T+ +I L Q RV E D++ M
Sbjct: 262 TTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVC 321
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
+ Y + C ++++A S+ +M G P+ TY L C VD
Sbjct: 322 KRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDT 381
Query: 434 ANALFDEAVRNGVEVKPKEY 453
AN L E R G+E+ Y
Sbjct: 382 ANELLHEMCRKGLELNIYTY 401
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 15/305 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ K+ ++H+ ++ T + D L + G M R G + + +
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK-GLELNIYT 400
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+V LC+ G A KL+KD F PD L+ +C ++ A L R+M
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 460
Query: 261 RGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
+ V +N +++ C+S + + EK+L M G+ N T+N LI
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGML---------EDGEKLLKWMLEKGIMPNATTYNSLIK 511
Query: 319 NLCKIRRSEDAIKLFYR-MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C IR + A YR M G P+ T+ +LIK +A + E + M G+
Sbjct: 512 QYC-IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 570
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y + ++ +A +FE+M+ +G D E Y++ +++ L
Sbjct: 571 LTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 630
Query: 438 FDEAV 442
DEA+
Sbjct: 631 CDEAI 635
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW-----------G 340
S A K+ M G+ +V++ N+ IS+L D IK+ + GEW G
Sbjct: 163 SFARKLFDKMLNYGLLISVDSCNLFISHL---SEDLDGIKIALK-GEWVLKLIEEMQIKG 218
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ +I L + +V E + ++ M S G A Y + C + + A
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+F++M+ +PD TY ++ C RV +A+ LF E V
Sbjct: 279 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 142/325 (43%), Gaps = 30/325 (9%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ I+ L ++G + L +ME + G K + + +++ LC++ + A L+ +
Sbjct: 201 STVINGLCKSGNTSMALQLLRKME-EKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259
Query: 227 NEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--------- 276
+ P D + ++ G+C G L+EA L EM TV + ++D
Sbjct: 260 DRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVS 319
Query: 277 ---CVSKLCRKK-------------DPFRLDS---EAEKVLLDMEYNGVPRNVETFNVLI 317
CV + KK D + L++ EA+KVL M G V ++N+LI
Sbjct: 320 EARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILI 379
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ CK RR ++A L M E P+ T+ L++ L Q R E + M S+G
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL 439
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y L LC +++A+ + + M+ PD Y++L+ +++ A L
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499
Query: 438 FDEAVRNGVEVKPKEYRVDPRYLKK 462
F + +G++ + Y + + L K
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLK 524
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 12/276 (4%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L +C+ RL VLG ++ G + D + ++ C G A L +
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKL----GIQPDAITFNTLINGRCIEGEIKEAVGLFNEM 188
Query: 226 ANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
D I +I G C G A +L R+M G + VAY I+D LC+
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIID---SLCKD 245
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
L ++A +L +M G+P +V T++ ++ C + +A LF M PN
Sbjct: 246 T----LVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
TF +L+ L + V E + + M G Y + C ++++A V +
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
M G P +Y++L+ +C R+D+A +L E
Sbjct: 362 IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVE 397
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 9/279 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +D L + G ++ FE M + G + + + +++ C N A+K++
Sbjct: 304 TFTILVDGLCKEGMVSEARCVFEAMTKK-GAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ P ++LI G+C +LDEAK L EM TV Y+ ++ LC+
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQ---GLCQ 419
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
P EA + +M +G+ ++ T++ L+ LCK ++A+KL M E P
Sbjct: 420 VGRP----QEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEP 475
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + +LI+ ++ A ++ E+ ++ + G + Y + L ++A +F
Sbjct: 476 DIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELF 535
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
KM+ DG P+S +Y++++ + + A L DE V
Sbjct: 536 RKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMV 574
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 14/259 (5%)
Query: 201 SLRLVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+ ++V+ LC+ G S A E + K A P+ + L+ G+C++ ++DEA+++
Sbjct: 304 TFTILVDGLCKEGMVSEARCVFEAMTKKGAE---PNAYTYNALMDGYCLNNQMDEAQKVL 360
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
M G +YN + ++ C+++ RLD EA+ +L++M + + T++ L
Sbjct: 361 DIMVDKGCAPVVHSYNIL---INGYCKRR---RLD-EAKSLLVEMSEKELTPDTVTYSTL 413
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ LC++ R ++A+ LF M G P+ T+ L+ L + + E +++ M+ +
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + + ++E A +F K+ DG P TY +++ D+A
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYE 533
Query: 437 LFDEAVRNGVEVKPKEYRV 455
LF + +G Y V
Sbjct: 534 LFRKMEDDGFLPNSCSYNV 552
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 45/262 (17%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDE 251
+G + SL +++ LC + +A L K I PD + LI G C++G++ E
Sbjct: 121 FGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKE 180
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L EM R G + ++Y+ +
Sbjct: 181 AVGLFNEMVRRGHQPDVISYSTV------------------------------------- 203
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
I+ LCK + A++L +M E GC PN + +I SL + V + +++ M
Sbjct: 204 -----INGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G Y L C + + +A +F +M P++ T+ +L+ C V
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318
Query: 432 DKANALFDEAVRNGVEVKPKEY 453
+A +F+ + G E P Y
Sbjct: 319 SEARCVFEAMTKKGAE--PNAY 338
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 70/181 (38%), Gaps = 16/181 (8%)
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
LG++A V LC + D F GV NV + N+LI+ LC++
Sbjct: 99 LGSIAKKKQYSTVVSLCNQMDLF----------------GVTHNVYSLNILINCLCRLNH 142
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
AI + +M + G P+ TF LI + E + + M G+ Y
Sbjct: 143 VVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYST 202
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LC A+ + KM+ G P+ Y ++ C V+ A L E V G
Sbjct: 203 VINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRG 262
Query: 446 V 446
+
Sbjct: 263 I 263
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 134/331 (40%), Gaps = 30/331 (9%)
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI-HDFLVDNKEVLGPKTLASCI-D 171
++ ++ L + H +E F + GR + LVD G + A C+ +
Sbjct: 267 VVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFE 326
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDS----LRLVVEKLCE----------NGYA-- 215
+ + G + M+ Y D L ++V+K C NGY
Sbjct: 327 AMTKKGAEPNAYTYNALMD-GYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385
Query: 216 ----SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
LV+ + E+ PD L++G C G+ EA L +EM G + Y
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
+ +LD LC+ LD EA K+L M+ + + ++ +N+LI + + E A +
Sbjct: 446 STLLD---GLCKHG---HLD-EALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKE 498
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
LF ++ G P T+ ++IK L + E E+ +M+ G+ Y +
Sbjct: 499 LFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFL 558
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ A+ + ++M + DS T+ +L+
Sbjct: 559 QNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 10/272 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGW 243
+F +E+ G K + ++ LC G A ++VK+ P D+I + LI G+
Sbjct: 453 WFRLLEK--GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 510
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C +GK++ RL EM + G + YN +L + + + D +L E +
Sbjct: 511 CNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE-------FKA 563
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G+ N+ T+ +++ CK R ED LF + N + ++IK+ Q V
Sbjct: 564 SGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAA 623
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++++ MKS G Y + +C I +E A + ++M+ +G P+ Y L+
Sbjct: 624 ALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIG 683
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++D A + + E + + Y V
Sbjct: 684 GYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 715
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 8/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D + ++ LC G A KL + A+ + + ++++G+C ++++
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L E+ EL ++ YN I + C+ + + A ++L +M+ G+ N T
Sbjct: 590 ENLFNELLSKKMELNSIVYNII---IKAHCQNGNV----AAALQLLENMKSKGILPNCAT 642
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ LI +C I EDA L M + G PN + LI + ++ + M
Sbjct: 643 YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMI 702
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S K Y + C + +E+A ++ KMK G PD TY++L +C N +D
Sbjct: 703 SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMD 762
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A + D+ G+ V Y
Sbjct: 763 NAFKVCDQMATEGLPVDEITY 783
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG----FELGTVAYNCILDCVSKLCRKK 285
FP K C+ + + ++ + R M G F V ++ LC+
Sbjct: 183 FPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNV--------INALCKGG 234
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
++++ E + + ME G+ NV T+N +I+ LC+ R ++A +L +M G PN
Sbjct: 235 ---KMENAIE-LFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNL 290
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L + + + ++D M AG+ + + C + IE A+ + +
Sbjct: 291 KTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDV 350
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
M + P S T LM +C ++++ A +E + +G+ + P
Sbjct: 351 MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHP 395
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 136/335 (40%), Gaps = 58/335 (17%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMER------DYGFKRDKDSLRLVVEKLCENGYASY 217
KT + I+ L++ L FF+++ GF + +++ C+ G
Sbjct: 291 KTYGALINGLIK-------LNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEG 343
Query: 218 AEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A K +KD + I P L++G+C +++ A+ E+ G + NC
Sbjct: 344 ALK-IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH--PDNC-Y 399
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
V LC+K FR S + + N P ++ +L+ LCK + +A +L++R
Sbjct: 400 SVVHWLCKK---FRYHSAFRFTKMMLSRNFRPSDL-LLTMLVCGLCKDGKHLEATELWFR 455
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY------------ 383
+ E G ++ T LI L A ++ E ++ M G + + Y
Sbjct: 456 LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 515
Query: 384 ----------------------YEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
Y FL R LC + +++ A+ ++++ K G + TY +
Sbjct: 516 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 575
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M +C NR++ LF+E + +E+ Y +
Sbjct: 576 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 610
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 110/283 (38%), Gaps = 10/283 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLV 222
KT + LV+A + F M G D S V+ LC+ G A E +
Sbjct: 187 KTCNFXLSSLVKANEFEKCCEVFRVMSE--GACPDVFSFTNVINALCKGGKMENAIELFM 244
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
K I P+ + +I G C +G+LD A L +M G + Y +++ + KL
Sbjct: 245 KMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKL- 303
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ +L +M G NV FN LI CK+ E A+K+ M
Sbjct: 304 ------NFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNIT 357
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P T L++ ++ ++ + ++ + S+G +I + Y + LC R A
Sbjct: 358 PTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRF 417
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ M + P +L+ C + +A L+ + G
Sbjct: 418 TKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 460
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A+ +FY + G P+ T + SL +A + E+ R+ S G + +
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 228
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
LC ++E A+ +F KM+ G +P+ TY+ ++ C + R+D A L ++ GV+
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288
Query: 449 KPKEY 453
K Y
Sbjct: 289 NLKTY 293
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 141/315 (44%), Gaps = 19/315 (6%)
Query: 140 YFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
YFG K + + + TL++ +D + G + + F +M R G ++
Sbjct: 291 YFGEMKRLGVMANVV----------TLSTFVDAFCKEGLVREAMKLFAQM-RVRGMMPNE 339
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ +V+ C+ G A L+ + ++ + P+ +++ G C +GK+ A +
Sbjct: 340 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSL 399
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M R G + + Y ++ K LD +L +M+ G+ +V + LI
Sbjct: 400 MERAGVKANELLYTTLIH--GHFMNKNSERALD-----LLNEMKNKGMELDVSLYGTLIW 452
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LCK+++ ++A L ++M + G PN + ++ + ++A + E ++ ++ +G
Sbjct: 453 GLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQP 512
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC I +A+S F+KM+ G +P+ + Y L+ +C + KA L
Sbjct: 513 NVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLM 572
Query: 439 DEAVRNGVEVKPKEY 453
+E V G+ + Y
Sbjct: 573 NEMVDKGMSLDKVVY 587
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 122/295 (41%), Gaps = 16/295 (5%)
Query: 163 PKTLASCIDRLVRAGRPTQ---VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
P +C L+R R Q V FE + F + +V++ LC+ G A
Sbjct: 165 PPNTRTCNHILLRLARNRQGGLVRRLFEHLPAPNVF-----TFNIVIDFLCKQGELVEAR 219
Query: 220 KL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
L V+ A PD + LI G+ G+L+E + L EM + G V YN +++C
Sbjct: 220 ALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCF 279
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
SK F +A +M+ GV NV T + + CK +A+KLF +M
Sbjct: 280 SK-------FGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRV 332
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G PNE T+ L+ +A R+ + ++D M G Y + LC ++
Sbjct: 333 RGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAV 392
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
A V M+ G + Y L+ + ++A L +E G+E+ Y
Sbjct: 393 ADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLY 447
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 22/325 (6%)
Query: 133 TLSFFTDYFGRRKDFK-AIHDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
TLS F D F + + A+ F + P T S +D +AGR + + M
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT------ANEIFPDDKICDLLIKGW 243
G + + ++V+ LC+ G + A+ ++ ANE+ LI G
Sbjct: 366 VHQ-GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTT-----LIHGH 419
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
++ + A L EM G EL Y + + LC+ + +LD EA+ +L M+
Sbjct: 420 FMNKNSERALDLLNEMKNKGMELDVSLYGTL---IWGLCKVQ---KLD-EAKSLLHKMDD 472
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ N + ++ K + +A+ L +++ + G PN T+ LI L +A + E
Sbjct: 473 CGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYE 532
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
D+M+ G + Y + C I + +A+ + +M G + D Y L+
Sbjct: 533 AISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLID 592
Query: 424 KWCAHNRVDKANALFDEAVRNGVEV 448
+ A AL + + G+++
Sbjct: 593 GHMKQGDLQGAFALKAKMIETGLQL 617
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 78/213 (36%), Gaps = 35/213 (16%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV TFN++I LCK +A LF RM GC P+ T+ LI + + E + ++
Sbjct: 198 NVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLV 257
Query: 369 DRMKSAGYAIGKKDY-----------------------------------YEFLTRLCGI 393
M+ +G A Y F+ C
Sbjct: 258 SEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKE 317
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +AM +F +M+ G P+ TY L+ C R+D A L DE V G+ Y
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 377
Query: 454 RVDPRYLKKPIAVKKGKKRETLPEKMARKRRRL 486
V L K V +L E+ K L
Sbjct: 378 TVMVDGLCKEGKVAVADDVLSLMERAGVKANEL 410
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 7/227 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P I ++LI C +G + EAK L M + G + G V Y+ ++D + ++
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQN-- 273
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A+++ M GV NV ++N++I+ LCK +R ++A+ L M P+ T+
Sbjct: 274 -----AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 328
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L ++ R+ +++ M G Y L LC + +++A ++F KMK
Sbjct: 329 NSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G P TY L+ C R+ A LF + G + Y V
Sbjct: 389 RGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 435
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 9/280 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
I+ L + G + M ++ G K + +++ C G A+++
Sbjct: 227 INALCKEGNVKEAKNLLAVMTKE-GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG 285
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ +++I G C ++DEA L REM TV YN ++D + K R
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 345
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L +E M + G P +V T+ L+ LCK + + A LF +M E G P T+
Sbjct: 346 NLMNE-------MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 398
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L + R+ E+ + G I Y ++ LC ++A+++ KM+
Sbjct: 399 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 458
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+G P++ T+++++ + DKA L E + G+ V
Sbjct: 459 NGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLV 498
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G + + +L +++ C G +++ ++ + PD + L+KG C+ G++ ++
Sbjct: 40 GIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKS 99
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ GF++ V+Y +L+ + K+ + A K+L +E NV
Sbjct: 100 LHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRC-------AVKLLRMIEDRSTRPNVVM 152
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +I LCK + +A L+ M G P+ T+ LI ++ ++D M
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI 212
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + LC +++A ++ M +G P TY LM +C V
Sbjct: 213 LKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQ 272
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A +F V+ GV Y +
Sbjct: 273 NAKQIFHAMVQMGVNPNVYSYNI 295
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
TL + + L G + L F +++ GF+ D S ++ LC+ G A KL++
Sbjct: 82 TLNTLMKGLCLKGEVKKSLHFHDKVVAQ-GFQMDHVSYGTLLNGLCKIGETRCAVKLLRM 140
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ + + +I G C D ++EA L EM G + Y ++ L +
Sbjct: 141 IEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQ 200
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
F L E M + V +N+LI+ LCK ++A L M + G P
Sbjct: 201 LMGAFSLLDE-------MILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKP 253
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ L+ V ++ M G Y + LC +R+++AM++
Sbjct: 254 GVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLL 313
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+M PD+ TY+ L+ C R+ A L +E G
Sbjct: 314 REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 114/279 (40%), Gaps = 12/279 (4%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L +C L + VLG ++ G++ D +L +++ LC G +
Sbjct: 51 LINCFCHLGQMAFSFSVLGKILKL----GYQPDTITLNTLMKGLCLKGEVKKSLHFHDKV 106
Query: 226 ANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ F D + L+ G C G+ A +L R + V YN I+D LC+
Sbjct: 107 VAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIID---GLCKD 163
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
K L +EA + +M+ G+ + T+ LI C + + A L M +P
Sbjct: 164 K----LVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPG 219
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ +LI +L + V E ++ M G G Y + C + ++ A +F
Sbjct: 220 VYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFH 279
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
M G NP+ +Y++++ C RVD+A L E +
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH 318
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ N T N+LI+ C + + + + ++ + G P+ T L+K L
Sbjct: 36 MEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 95
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + D++ + G+ + Y L LC I A+ + ++ P+ Y+
Sbjct: 96 VKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNT 155
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
++ C V++A L+ E G+
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGI 181
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 7/223 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ K ++L++ GKL A+ + EM R G V +N ++ S +C+ D L
Sbjct: 242 PEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLM---SGMCKASD---L 295
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+S A + M GV +V T+ + LCK R +DA+++F M E G +PN F
Sbjct: 296 NS-ANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTT 354
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI + + V G E+ M + G Y LC + ++ A + E+M+ +G
Sbjct: 355 LIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNG 414
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
PD TY L+ +C +D A + E GV + Y
Sbjct: 415 LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTY 457
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 9/274 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L +AGR + FE M R+ G + +++ C+ G + +L ++
Sbjct: 316 TYGAFMQGLCKAGRIQDAVEMFEEM-RERGVNPNTVVFTTLIDAHCKEGNVAAGLELHRE 374
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A D + + L G C L A + EM G + V Y ++D C+
Sbjct: 375 MATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLID---GFCK 431
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + LD E + +M GV + T+ LIS L K RS D+ ++ M E G P
Sbjct: 432 EGE---LDMAME-MKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEP 487
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TT+ ++I + + + V G +++ M++ G G Y + C + +++ A +
Sbjct: 488 DNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLL 547
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
M G PD TY++L+ C H +V A L
Sbjct: 548 NAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL 581
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 8/242 (3%)
Query: 206 VEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ LC+ G A ++ ++ + P+ + LI C +G + L REM G
Sbjct: 321 MQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGI 380
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ VAYN + + LCR +D A ++ +M NG+ + T+ LI CK
Sbjct: 381 KTDLVAYNAL---ANGLCRVRDL----KAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEG 433
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ A+++ M + G +E T+ LI L ++ R + + ++ M AG Y
Sbjct: 434 ELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYT 493
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ C ++ + ++M+ G P TY+++M +C ++ A+ L + +
Sbjct: 494 MVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNI 553
Query: 445 GV 446
GV
Sbjct: 554 GV 555
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA L + GVP + FN+L+ ++ + + A +F M G P TF L+
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLM 286
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ +A+ + + + M AG A Y F+ LC RI+ A+ +FE+M+ G N
Sbjct: 287 SGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P++ + L+ C V L E G++ Y
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAY 387
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 109/295 (36%), Gaps = 11/295 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLD 250
D G + +++ + +G + A + + P + + L+ G C L+
Sbjct: 237 DAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLN 296
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
A L M + G Y + + K R +D A ++ +M GV N
Sbjct: 297 SANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQD-------AVEMFEEMRERGVNPNT 349
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
F LI CK ++L M G + + L L + + +++++
Sbjct: 350 VVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEE 409
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M++ G K Y + C ++ AM + ++M +G D TY L++ R
Sbjct: 410 MRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGR 469
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRR 485
+ + E + G+E Y + K VK G K L ++M K R+
Sbjct: 470 SVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFK---LLKEMQNKGRK 521
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+ D L T + I L ++GR M + G + D + +V++ C+N
Sbjct: 445 MSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEM-MEAGLEPDNTTYTMVIDAFCKNS 503
Query: 214 YASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
KL+K+ N+ P ++++ G+C+ G++ A L M G + YN
Sbjct: 504 DVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYN 563
Query: 273 CILDCVSKLCRKKDPFRLDS 292
+LD K + +D L S
Sbjct: 564 ILLDGHCKHGKVRDAEELKS 583
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 8/257 (3%)
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDG 247
M + G D S +V LC+ G +A +LV+ +P + + + L++G C+ G
Sbjct: 10 MMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHG 69
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
L+++ +L ++ G Y+ +L+ K R +EA K+L ++ G
Sbjct: 70 NLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYK-------ERGVNEAMKLLDEIIAKGWQ 122
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N+ ++NVL++ LCK R+E+AI+ F + G +PN ++ ++++SL R E +++
Sbjct: 123 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQL 182
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M S + Y + L RIE A V ++M P + TY+ ++ C
Sbjct: 183 LAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCK 242
Query: 428 HNRVDKANALFDEAVRN 444
++D D+ + +
Sbjct: 243 EGKLDLVIKCLDQMIHH 259
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+ +A R+ M G +Y + V+ LC++ + A +++ ME NG P
Sbjct: 1 MKKATRVMEMMIESGIIPDAASYTFL---VNNLCKRGNI----GHAMQLVEKMEENGYPT 53
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N T+N L+ LC +++L ++ G PNE T+ L+++ Y+ V E +++
Sbjct: 54 NTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLL 113
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
D + + G+ Y LT LC R E+A+ F + + G NP+ +Y++++ C
Sbjct: 114 DEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHE 173
Query: 429 NRVDKANALFDE 440
R ++AN L E
Sbjct: 174 GRWEEANQLLAE 185
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 120/266 (45%), Gaps = 10/266 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
++ L + G + E+ME + G+ + + +V LC +G + + +L+ K
Sbjct: 27 VNNLCKRGNIGHAMQLVEKMEEN-GYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKG 85
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P++ L++ + ++EA +L E+ G++ V+YN +L + K R ++
Sbjct: 86 LVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAI 145
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R D+ G NV ++N+++ +LC R E+A +L M P+ T+
Sbjct: 146 RF-------FRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTY 198
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI SL R+ E++D M A + Y + LC +++ + ++M
Sbjct: 199 NILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIH 258
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKA 434
NP+ T++ + C RV +A
Sbjct: 259 HRCNPNEGTFNAIAV-LCKQGRVPEA 283
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 9/246 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G++ + S +++ LC+ G A + +D ++ F P+ +++++ C +G+ +EA
Sbjct: 120 GWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEA 179
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L EM V YN ++ ++ R + F +VL +M + T
Sbjct: 180 NQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAF-------EVLDEMVRASFKPSATT 232
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +I++LCK + + IK +M C+PNE TF I L + RV E +I +
Sbjct: 233 YNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNA-IAVLCKQGRVPEAFSIIQNLG 291
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ + Y +T LC A + +M G PD TY L+ C +D
Sbjct: 292 NKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLD 351
Query: 433 KANALF 438
+A +F
Sbjct: 352 EALEIF 357
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 114/285 (40%), Gaps = 43/285 (15%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L + GR + + FF + GF + S +++ LC G A +L+ + + E P
Sbjct: 135 LCKEGRTEEAIRFFRDLPSK-GFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSP 193
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
++LI G+++ A + EM R F+ YN I ++ LC++ +LD
Sbjct: 194 SLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPI---IAHLCKEG---KLD 247
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVL----------------------------------I 317
K L M ++ N TFN + I
Sbjct: 248 L-VIKCLDQMIHHRCNPNEGTFNAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVI 306
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
++LC+ + A +L Y M ++G P+ T+ LI+ L + E E+ ++ Y
Sbjct: 307 TSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYR 366
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ + C R + ++ + E M G+ P+ TY +++
Sbjct: 367 PILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIV 411
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 43/157 (27%)
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLARE 258
D + V+ LC G A +L+ + F PD LI+G C++G LDEA +
Sbjct: 300 DFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEI--- 356
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
FRL +E N ++ FN LI
Sbjct: 357 -----------------------------FRL----------LEENDYRPILDNFNALIL 377
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
CK R++ ++ + M E G PNETT+ ++++ +
Sbjct: 378 GFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGI 414
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 30/310 (9%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
+ G+ Q + F +M R G D + V+ LC++G A + + +E + P +
Sbjct: 386 KQGKVDQAMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL--- 290
+ + LI C+ K D+AK L EM G L T+ +N I+D K R + +L
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 291 -------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
EA K+L M G+ + T+N LI+ CKI R
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
EDA+ LF M G P+ T+ ++++ L+Q R E+ + +G + Y
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L LC ++A+ +F+ + ++ T+++++ R D+A LF NG
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Query: 446 VEVKPKEYRV 455
+ + Y +
Sbjct: 685 LVPDVRTYSL 694
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 9/295 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V N + +T S + +G+P + +GF ++M D G + D + +++ LC+NG
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNG 318
Query: 214 YASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ A K+ T + P+ L++G+ G L E L M R G ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ C ++D +A V M G+ + T+ +I LCK R EDA++
Sbjct: 379 ILI------CAYAKQGKVD-QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F +M + P + LI SL + + E+I M G + + + C
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
R+ ++ +F+ M G PD TY L+ +C ++D+A L V G++
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 8/231 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLD 250
D G D +++ C+ G +EKL + PD LI G+C+ GK+D
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA +L M G + V YN +++ K+ R +D L E ME +GV ++
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE-------MESSGVSPDI 584
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N+++ L + RR+ A +L+ + E G +T+ +++ L + E M
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ + + + + L + R ++A +F + +G PD TY L+
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 16/249 (6%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++ + A+E+ P+ +LI C G+LD + + GF + +A+ +L
Sbjct: 78 RMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLL---K 134
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC K R + VL M G NV ++N+L+ LC RS++A++L M +
Sbjct: 135 GLCADK---RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191
Query: 340 G--CHPNETTFLVLIKSLYQAARV----GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
G C P+ ++ +I ++ + G EM+DR G Y + LC
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR----GILPNVVTYSSIIAALCKA 247
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +++AM V M +G P+ TY+ ++ +C+ + +A + +GVE Y
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307
Query: 454 RVDPRYLKK 462
YL K
Sbjct: 308 NSLMDYLCK 316
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 15/265 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV--KDTANEIFPDDKICDLLIKGWCVDGKLDE 251
GF+ D + +++ LC + S A +V + T P+ ++L+KG C + + E
Sbjct: 121 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQE 180
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR---LDSEAEKVLLDMEYNGVPR 308
A L + M G + C D VS F+ LD +A +M G+
Sbjct: 181 ALELLQMMPDDGGD-------CPPDVVSYTTVINGFFKEGDLD-KAYGTYHEMLDRGILP 232
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV T++ +I+ LCK + + A+++ M + G PN T+ ++ + + E +
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M S G Y + LC R +A +F+ M G P+ TY L+ +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
+ + + L D VRNG+ P Y
Sbjct: 353 GALVEMHGLLDLMVRNGIH--PNHY 375
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ID + GR + F+ M R G K D + +++ C G A KL+ +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD + LI G+C ++++A L REM G + YN IL + +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT----- 597
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + A+++ + + +G + T+N+++ LCK +++A+++F +
Sbjct: 598 --RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
TF ++I +L + R E ++ + + G
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + I+ + R L F ME G D + ++++ L + + A++L V
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESS-GVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T + + ++++ G C + DEA R+ + + +L T +N ++ + K+ R
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA+ + + NG+ +V T++++ NL + E+ LF M E GC
Sbjct: 670 -------NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722
Query: 344 NETTFLVLIKSLYQ---AARVGEGDEMID 369
N +++ L Q R G MID
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMID 751
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 152/375 (40%), Gaps = 57/375 (15%)
Query: 117 FNHWLTQNANFSHTDET-------LSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLA-S 168
F W + + H E L+F D R F F + ++ +L ++ A S
Sbjct: 134 FFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVF-----FELKDRGLLMTESAANS 188
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
I G ++L + RM+ + G + +V L + + AEK+ +
Sbjct: 189 LIKSFGNLGLVEELLWVWRRMKEN-GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGG 247
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKR--------------------------------- 254
+I PD +++IKG+C GKL +A
Sbjct: 248 KIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTC 307
Query: 255 --LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L EM G E+ +Y+ + + LC+++ EA V M G NV
Sbjct: 308 LSLYLEMEERGLEIPPHSYSLV---IGGLCKQRKCM----EAYAVFETMNQKGCRANVAI 360
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ LI + K E+A++LF RM G P+ T+ VL+ L ++ R+ +G E+ D +
Sbjct: 361 YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 420
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G AI Y + L RIE A ++FE+M G DS Y+ ++ H ++D
Sbjct: 421 NKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKID 480
Query: 433 KANALFDEAVRNGVE 447
+A ALF G +
Sbjct: 481 QALALFGRMEEEGCD 495
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 10/287 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P + + I L + + + FE M + G + + +++ +NG A +L
Sbjct: 323 PHSYSLVIGGLCKQRKCMEAYAVFETMNQK-GCRANVAIYTALIDSYSKNGSMEEAMRLF 381
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ NE F PD +L+ G C G+LD+ L G + + Y ++D + K
Sbjct: 382 ERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKA 441
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R +D AE + +M G R+ +N +I L K + + A+ LF RM E GC
Sbjct: 442 GRIED-------AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGC 494
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
TF +LI L++ + E + D+M G + LC ++ +A
Sbjct: 495 DQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACK 554
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+ + + G P++ D++ T C R+ +A L D V G E+
Sbjct: 555 ILDDLAPMGIIPETAFEDMINT-LCKAQRIKEACKLADGIVDRGREI 600
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 7/217 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+I G C K EA + M + G Y ++D SK ++ RL
Sbjct: 328 LVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFER---- 383
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
M+ G + T++VL++ LCK R +D ++LF G N + LI L +
Sbjct: 384 ---MKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGK 440
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
A R+ + + + + M G A Y + L +I+QA+++F +M+ +G + T
Sbjct: 441 AGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYT 500
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ +L+ ++ ++A +D+ + G+ +R
Sbjct: 501 FTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFR 537
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 42/250 (16%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LIK + G ++E + R M G + YN +++ + + ++S AEKV
Sbjct: 189 LIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV------NSMFIES-AEKVF 241
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ + + T+N++I CK + + A++ F M P++ T++ LI++ Y
Sbjct: 242 EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE 301
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER----------------------- 395
+ M+ G I Y + LC +
Sbjct: 302 RDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIY 361
Query: 396 ------------IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+E+AM +FE+MK +G PD+ TY +L+ C R+D LFD
Sbjct: 362 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN 421
Query: 444 NGVEVKPKEY 453
GV + Y
Sbjct: 422 KGVAINAMFY 431
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%)
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
V +++ G+ N LI + + E+ + ++ RM E G P+ T+ L+ L
Sbjct: 170 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ + +++ + M Y + C ++++AM F M+ PD
Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 289
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY L+ + D +L+ E G+E+ P Y +
Sbjct: 290 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL 328
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 85/237 (35%), Gaps = 43/237 (18%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + DF + + AS ID L +AGR FE M + G RD
Sbjct: 407 GRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMS-EKGCARDSYC 465
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++ L ++ GK+D+A L M
Sbjct: 466 YNAIIDALAKH----------------------------------GKIDQALALFGRMEE 491
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G + + ++D + K + + EA K M G+ V +F L LC
Sbjct: 492 EGCDQTVYTFTILIDGLFKEHK-------NEEAIKFWDKMIDKGITPTVASFRALAIGLC 544
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
+ A K+ + G P ET F +I +L +A R+ E ++ D + G I
Sbjct: 545 LCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRIKEACKLADGIVDRGREI 600
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 149/335 (44%), Gaps = 15/335 (4%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD----NKEVLGPKTLASCI 170
L F ++ + F HT +L GR + F I + LVD ++ ++ P+++ +
Sbjct: 110 LAFFNYTNKRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVL 169
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF 230
R+ + Q + F + ++ + D ++ LC+ A + ++
Sbjct: 170 GRIAKVCSVKQTVESFRKFKKLVP-EFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFR 228
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + ++L+ GW +EA+ EM G E V+YNC++D C+ ++ R
Sbjct: 229 PDLRTFNILLSGW---KSAEEAEGFFDEMREMGVEPDVVSYNCLIDV---YCKGREIER- 281
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A KV+ M + +V ++ +I L + + + A + M E+GC+P+ +
Sbjct: 282 ---AYKVIDKMRDEQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNA 338
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
I++ A R+G+ D ++D M G + Y F + ++ ++++MK G
Sbjct: 339 AIRNFCIANRLGDADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTG 398
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P++++ L + +V+ A L+++ V G
Sbjct: 399 CLPNTQSCMFLTRLFRRQEKVEMALELWNDMVEKG 433
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
E T +N +L LC++K +A V ++++ P ++ TFN+L+S +
Sbjct: 194 EFDTACFNALL---RTLCQEKSM----RDARNVYHSLKHDFRP-DLRTFNILLSGW---K 242
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+E+A F M E G P+ ++ LI + + ++ID+M+ + Y
Sbjct: 243 SAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYT 302
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ L + + ++A V ++MK G PD Y+ + +C NR+ A+ L DE V
Sbjct: 303 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGK 362
Query: 445 GVEVKPKEYRV 455
G+ Y +
Sbjct: 363 GLSPNATTYNL 373
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 189/447 (42%), Gaps = 46/447 (10%)
Query: 13 LLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNP--KTIDDPDQVIARSLSG- 69
++ + P+ F SP FSP F S PFSS + + I+ ++I S S
Sbjct: 1 MILRRPNFFQSP----LRYFSPIPLSIFYSHPFSSSTDNQSLHQNIETVFRIITTSSSST 56
Query: 70 ELLENLEADPLPISQRL------HLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQ 123
++ +LE+ + +S L + FSH P +L F ++ +
Sbjct: 57 DMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQAL----------------EFFNYTAK 100
Query: 124 NANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVL 183
F HT ++ GR + F I D L+D K +L S +V GR +V
Sbjct: 101 RRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVK--FKDPSLISLRTVMVVLGRIAKVC 158
Query: 184 GFFERMERDYGFKR-----DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL 238
+ +E FK+ D ++ LC+ A + + P+ + ++
Sbjct: 159 SVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNI 218
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ GW +EA+ EM G + V+YNC++D C+ ++ +A KV+
Sbjct: 219 LLSGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVY---CKNREM----DKAFKVV 268
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M +P +V T+ +I L + + + A + M E+GC+P+ + I++ A
Sbjct: 269 GKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIA 328
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+ E +++D M + G + Y F ++ A +++ +M G P++++
Sbjct: 329 KRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSC 388
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+ + + + + A L+++ ++ G
Sbjct: 389 LFLVRLFKKYEKEEMALELWNDMIQKG 415
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 13/238 (5%)
Query: 184 GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKG 242
GFF+ M + G K D S +V+ C+N A K+V +E P D I +I G
Sbjct: 231 GFFDEM-IEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGG 289
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLD 300
+ G+ D+A+ + +EM G AYN + C++K RL EA +L +
Sbjct: 290 LGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAK--------RL-HEAFDLLDE 340
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ N T+N+ + A L+ RM + GC PN + L L++ + +
Sbjct: 341 MVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEK 400
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
E+ + M G+ E LC + ++ +A S F +M GH P ++
Sbjct: 401 EEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSF 458
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 295 EKVLLDME--YNGVPR----NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EK ++D Y+G+ N++TFN+L+S + SE+A F M E G P+ ++
Sbjct: 192 EKSMMDARNVYHGLKSMFRPNLQTFNILLSGW---KSSEEAEGFFDEMIEMGVKPDVVSY 248
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ + + + +++ +M+ Y + L + + ++A ++ ++MK
Sbjct: 249 NCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKE 308
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G PD Y+ + +C R+ +A L DE V G+ Y +
Sbjct: 309 YGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNL 355
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 7/209 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LIKG C G++D+A R+ +M RG G Y +LD + K+ R EAE +
Sbjct: 166 ILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKV-------RRVGEAEAL 218
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L +M GV NV T+N LI LC+ R +D KL +M P+ T+ ++ L +
Sbjct: 219 LGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCK 278
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+VG G +++ G A+ Y + C ++ A+ V + MK + NP +T
Sbjct: 279 HGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQT 338
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ ++ +C +V KA A + G+
Sbjct: 339 FNEVIHGFCCGGKVHKAMAFLTQMAGAGL 367
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 17/310 (5%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R + +A+ +V+ V T + I L + GR V E+ME D +
Sbjct: 211 RVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQR-HSPDCWTY 269
Query: 203 RLVVEKLCENGYASYAEKLV-----KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
VV LC++G + K++ K A E+ + LI G+C G + A + +
Sbjct: 270 TQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA----LINGYCKGGDMKAALDVLQ 325
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
M R G +N + + C + A L M G+ N TFN LI
Sbjct: 326 LMKRNRVNPGVQTFN---EVIHGFCCGGKVHK----AMAFLTQMAGAGLSPNTVTFNSLI 378
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
S C + + A++L M E+G P+ T+ + I +L ++ E + + G
Sbjct: 379 SGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIK 438
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + C + I+ A + EKM ++ PD TY+ L+ C R+D+A L
Sbjct: 439 AHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDL 498
Query: 438 FDEAVRNGVE 447
D+ + G+E
Sbjct: 499 LDKMKKQGIE 508
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN-GVPRNVETFNVLI 317
M G T YNC++ LCR L + A + + M G + ++ +LI
Sbjct: 116 MREAGLAPDTFTYNCLM---LGLCRAG----LLAAACGLFVQMPRRWGACYDRYSYTILI 168
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
LC R +DA ++F +M C P T+ VL+ L + RVGE + ++ M + G
Sbjct: 169 KGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVV 228
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + LC R + + EKM+ H+PD TY ++ C H +V +
Sbjct: 229 PNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKV 288
Query: 438 FDEAVRNGVEVKPKEY 453
EA+ GV ++ Y
Sbjct: 289 LHEAIGKGVALEVLTY 304
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 9/230 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + P + + +I G+C GK+ +A +M G TV +N ++ + +K
Sbjct: 330 NRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKI 389
Query: 287 PFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
RL LD ME GV + +T+ + I LC + E+A LF + G +
Sbjct: 390 ALRL--------LDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHN 441
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ L+ Q + ++++M S Y + LC ++R+++A+ + +K
Sbjct: 442 VIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDK 501
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
MK G P + T+++L+ + + A ++++ + +G + + Y +
Sbjct: 502 MKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTL 551
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 18/295 (6%)
Query: 161 LGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
L P T+ S I G L + ME +YG D+ + + ++ LC+ G A
Sbjct: 367 LSPNTVTFNSLISGQCSVGERKIALRLLDLME-EYGVLPDRQTYAIFIDALCDEGQLEEA 425
Query: 219 EKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
L I + I L+ G+C G +D A L +M YN ++D
Sbjct: 426 HSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLID- 484
Query: 278 VSKLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
LC+ K RLD + LLD M+ G+ TFN+LI + ++ DA K++ +M
Sbjct: 485 --GLCKVK---RLDRAID--LLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537
Query: 337 GEWGCHPNETTFLVLIKS-LYQAARVGEGDEM-IDRMKSAGYAIGKKDYYEFLTRLCGIE 394
GC P++ T+ + I + ++ A E +M + M AG + Y +
Sbjct: 538 ISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAG 597
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
E+A KM + +PD TY +L+ C N+ D ++A +E + V+V+
Sbjct: 598 LKEKAFFAHVKMLSVPIDPDCTTYSILLNYMC--NK-DDSDAFDNEKIWKMVDVR 649
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M +G P N T+N LI+ CK+ DA RM E G P+ T+ L+ L +A
Sbjct: 81 MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140
Query: 361 VGEGDEMIDRM-KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+ + +M + G + Y + LC RI+ A VF KM P TY
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
+L+ C RV +A AL E V GV
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKGV 227
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 135/357 (37%), Gaps = 51/357 (14%)
Query: 120 WLTQNANFSHTDETLSFFT-----DYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV 174
+LTQ A + T++F + G RK + D + + + +T A ID L
Sbjct: 358 FLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALC 417
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
G+ + F + G K +V C+ G A L++ A+E PD
Sbjct: 418 DEGQLEEAHSLFSCLPMK-GIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDV 476
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL-----------------D 276
+ LI G C +LD A L +M + G E T +N ++
Sbjct: 477 HTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQ 536
Query: 277 CVSKLCR----------KKDPFRLDSEAEKV---LLDMEYNGVPRNVETFNVLISNLCKI 323
+S C+ D F ++ E + +++M GV +VET+N +I
Sbjct: 537 MISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDA 596
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLI--------------KSLYQAARVGEGDEMID 369
E A +M P+ TT+ +L+ + +++ V E+ +
Sbjct: 597 GLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFE 656
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+M + A G Y L LC R+E+ + KM+ + D + D L+ +C
Sbjct: 657 QMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYC 713
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D S +V LC G YA +LV +P + + + L++G C+ G L ++
Sbjct: 127 GIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQS 186
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L + + G Y+ +L+ K R EA K+L ++ G N+ +
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYK-------ERGADEASKLLDEIIAKGGEPNLVS 239
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NVL++ LCK R+EDAI+LF + G PN ++ +L++SL R E + ++ M
Sbjct: 240 YNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMN 299
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y + L R E A+ V E+M P + +Y+ ++ C ++D
Sbjct: 300 GDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLD 359
Query: 433 KANALFDEAV 442
D+ +
Sbjct: 360 LVVKCLDQMM 369
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ C K+ +A ++ M G +Y + VS LCRK +
Sbjct: 95 PDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFL---VSSLCRKGNV--- 148
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A +++ ME G P N T+N L+ LC +++L R+ + G PN T+
Sbjct: 149 -GYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+++ Y+ E +++D + + G Y LT LC R E A+ +F ++ + G
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKG 267
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+P+ +Y++L+ C R ++AN L E NG E P
Sbjct: 268 FSPNVVSYNILLRSLCNEGRWEEANVLLAEM--NGDERSP 305
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 10/270 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+ L R G + ++ME +YG+ + + +V LC +G + + +L+ +
Sbjct: 139 VSSLCRKGNVGYAMQLVDKME-EYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ L++ + DEA +L E+ G E V+YN +L + K R +D
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAI 257
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL E + G NV ++N+L+ +LC R E+A L M P+ T+
Sbjct: 258 RLFRE-------LPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTY 310
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI SL R E+++ M A + Y + LC +++ + ++M
Sbjct: 311 NILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMY 370
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
NP+ TY+ + T C V +A ++
Sbjct: 371 RHCNPNEGTYNAIAT-LCEEGMVQEAFSII 399
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 35/319 (10%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD E G T + LVR G TQ L +R+ + G + + ++E
Sbjct: 154 LVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQK-GLVPNAYTYSFLLEAA 212
Query: 210 CENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
+ A A KL+ + A P+ ++L+ G C +G+ ++A RL RE+ GF
Sbjct: 213 YKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNV 272
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSE----------------------------AEKVLLD 300
V+YN +L + R ++ L +E A +VL +
Sbjct: 273 VSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEE 332
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M ++N +I++LCK + + +K +M C+PNE T+ I +L +
Sbjct: 333 MIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGM 391
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E +I + + ++ ++ Y +T LC A + +M G PDS TY
Sbjct: 392 VQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451
Query: 421 LMTKWCAHNRVDKANALFD 439
L+ C +++A +F
Sbjct: 452 LIRGLCMEGMLNEAIEIFS 470
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 11/274 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFP 231
L + GR + F + GF + S +++ LC G A L+ + +E P
Sbjct: 247 LCKEGRTEDAIRLFRELPSK-GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSP 305
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
++LI + G+ + A + EM R F+ +YN I ++ LC+ +LD
Sbjct: 306 STVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPI---IAHLCKDG---KLD 359
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
K L M Y N T+N I+ LC+ ++A + +G + + ++
Sbjct: 360 LVV-KCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIV 417
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I SL + +++ M G+ Y + LC + +A+ +F M+ + +
Sbjct: 418 ITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENN 476
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD+E Y+ L+ C R D A +F+ V G
Sbjct: 477 KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKG 510
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%)
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ +LCK + AIK+ M G P+ +++ L+ SL + VG +++D+M+ G
Sbjct: 103 LLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYG 162
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y Y + LC + Q++ + +++ G P++ TY L+ D+A+
Sbjct: 163 YPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAS 222
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
L DE + G E Y V
Sbjct: 223 KLLDEIIAKGGEPNLVSYNV 242
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A KV+ M +G+ + ++ L+S+LC+ A++L +M E+G N T+ L+
Sbjct: 115 KAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLV 174
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER-IEQAMSVFEKMKTDGH 411
+ L + + +++DR+ G + Y FL ER ++A + +++ G
Sbjct: 175 RGLCMHGNLTQSLQLLDRLIQKGL-VPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG 233
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
P+ +Y++L+T C R + A LF E G Y + R L
Sbjct: 234 EPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSL 282
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 206 VEKLCENGYASYAEKLVKDTANEIFPDDK-ICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LCE G A +++ N+ + ++I C G A +L EM + GF
Sbjct: 383 IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGF 442
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ Y+ + + LC + + +EA ++ ME N P + E +N LI CK R
Sbjct: 443 TPDSFTYSSL---IRGLCMEG----MLNEAIEIFSVMEENNKP-DTENYNSLILGCCKSR 494
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
R++ A+ +F M G PNETT+ +L++ +
Sbjct: 495 RTDLALDVFEIMVGKGYLPNETTYTILVEGI 525
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R DA M E G P+ L+ L +A ++ + ++++ M +G Y
Sbjct: 77 RLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYT 136
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
++ LC + AM + +KM+ G+ ++ TY+ L+ C H + ++ L D ++
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQK 196
Query: 445 GV 446
G+
Sbjct: 197 GL 198
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G++ D + +++ C+ G A+++++D A + F PD+ LI G C DG +D A
Sbjct: 315 GYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRA 374
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ E G + V N ++ +S+ L +A K++ +M NG ++ T
Sbjct: 375 INVFNEAMEKGLKPNLVLCNTLVKGLSQQ-------GLILQALKLMNEMSENGCSPDIWT 427
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N++I+ LCKI DA L G P+ TF LI + ++ E++DRM
Sbjct: 428 YNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMW 487
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G + Y L LC + E M F+ M G P+ TY++L +C +V+
Sbjct: 488 NHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVE 547
Query: 433 KANALFDEAVRNGV 446
+A L +E G+
Sbjct: 548 EALNLIEEMQNKGL 561
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 10/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
+ L + G Q L M + G D + LV+ LC+ G S A+ LV D A
Sbjct: 397 VKGLSQQGLILQALKLMNEMSEN-GCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKG 455
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + LI G+C KLD A + M+ G + YN IL+ + K + +D
Sbjct: 456 HLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVM 515
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L ME VP N+ T+N+L + CK R+ E+A+ L M G P+ F
Sbjct: 516 G------TFKLMMEKGCVP-NIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568
Query: 349 LVLIKSLYQAARVGEGDEMIDRM-KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
L+K + ++ R+ + ++ Y + G + A +F KM
Sbjct: 569 GTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+G +PDS TY +++ +C ++ + + G+
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGL 667
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 137/295 (46%), Gaps = 14/295 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFF-ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T S I+ L + G + + F E ME+ G K + +V+ L + G A KL+
Sbjct: 357 TYCSLINGLCQDGDIDRAINVFNEAMEK--GLKPNLVLCNTLVKGLSQQGLILQALKLMN 414
Query: 224 DTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + N PD +L+I G C G + +A L + G +N ++D C
Sbjct: 415 EMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID---GYC 471
Query: 283 RKKDPFRLDSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+K +LD+ E ++D +N GV +V T+N +++ LCK + ED + F M E GC
Sbjct: 472 KK---LKLDNAIE--IVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGC 526
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
PN T+ +L +S +A +V E +I+ M++ G ++ + C ++ A
Sbjct: 527 VPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQ 586
Query: 402 VFEKMKTD-GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+F+++ + TY++++ + ++ A LF++ NG YRV
Sbjct: 587 LFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRV 641
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 152/390 (38%), Gaps = 48/390 (12%)
Query: 97 PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL-- 154
P V + + + +A+ FN ++ F HT T + G +F+A+ + L
Sbjct: 7 PKHVAAVVKYQKNPLKALEIFNSVKKEDG-FKHTLLTYKGMIEKLGFHGEFEAMEEVLAE 65
Query: 155 ----VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+DN + G + R G+ + + FERM+ + + S ++ L
Sbjct: 66 TRMNIDNGLLEG--VYIGAMRNYGRKGKIQEAVDVFERMDF-FNCEPSVQSYNAIMNILV 122
Query: 211 ENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
E Y A K+ ++ I PD + +K +C + A+RL M G E V
Sbjct: 123 EYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAV 182
Query: 270 AYNCILD--------------------------------CVSKLCRKKDPFRLDSEAEKV 297
AY ++ + LCRK E+E++
Sbjct: 183 AYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHV----QESERL 238
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
L + GV N+ T N+ I C+ +AI+L +G G P+ T+ LI L +
Sbjct: 239 LNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCK 297
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+V E + + +M + GY Y + C + ++ A + G PD T
Sbjct: 298 NFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDEST 357
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
Y L+ C +D+A +F+EA+ G++
Sbjct: 358 YCSLINGLCQDGDIDRAINVFNEAMEKGLK 387
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 8/217 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD + LI C G + E++RL ++ + G N + C++
Sbjct: 212 ICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF---IQGFCQRA--- 265
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +EA + LLD G+ +V T+N LI LCK + +A +M G P+ T+
Sbjct: 266 -MLNEAIR-LLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTY 323
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I + + D+++ G+ + Y + LC I++A++VF +
Sbjct: 324 NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAME 383
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G P+ + L+ + +A L +E NG
Sbjct: 384 KGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 16/216 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ++ L +AG+ V+G F+ M + G + + ++ E C+ A L+++
Sbjct: 497 TYNSILNGLCKAGKYEDVMGTFKLM-MEKGCVPNIITYNILTESFCKARKVEEALNLIEE 555
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAR---EMYRGGFELGTVAYNCILDCVSK 280
N+ + PD L+KG+C +G LD A +L + E Y+ F YN +++ +
Sbjct: 556 MQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYK--FSHTIATYNIMINAFAG 613
Query: 281 LCRKKDPFRLD-SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+L+ + AEK+ M NG + T+ V+I CK E
Sbjct: 614 --------KLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
G P+ TTF ++ L RV E +I M G
Sbjct: 666 GLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKG 701
>gi|224135537|ref|XP_002322098.1| predicted protein [Populus trichocarpa]
gi|222869094|gb|EEF06225.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 12/276 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + GR M R GF S ++ LC+ G A +L+++
Sbjct: 309 IDSLCKVGRSHGASRVVYIM-RKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFG 367
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ +L++ C LD+A+ + + M G T YN L LC +P
Sbjct: 368 YLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYL---RALCLMNNP- 423
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM--GEWGCHPNET 346
+E VL+ M +V T N +I+ CK+ R E+A+K+ M G++ P+
Sbjct: 424 ---TELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSA-PDAV 479
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
TF +I L R E ++ +M G G Y L L ++ ++AM+VF++M
Sbjct: 480 TFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEM 539
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
TDG +S+TY +++ C ++D A +DE +
Sbjct: 540 ITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVI 575
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 12/252 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-- 230
L PT++L M + + D +L V+ C+ G A K++ D F
Sbjct: 417 LCLMNNPTELLNVLVSMLQT-NCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSA 475
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +I G G+ EA+ L +M G G V YN IL + KL +L
Sbjct: 476 PDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKL-------QL 528
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET-TFL 349
EA V +M +GV N +T+++++ LC+ D K F+ W ++ +
Sbjct: 529 TKEAMAVFDEMITDGVAANSQTYSIIVEGLCE-SGQIDGAKKFWDEVIWPSKIHDDFVYA 587
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++K L ++ + E + + +G Y + R C + +A + +M+ +
Sbjct: 588 AILKGLCRSGHLNEAIHFLYELVDSGVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKN 647
Query: 410 GHNPDSETYDLL 421
G PD+ T+ L
Sbjct: 648 GLTPDAVTWRTL 659
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSKLCRKKDPFR 289
PD + +I G+C G+++EA ++ +M G F V + I+ + + R +
Sbjct: 440 PDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQ---- 495
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
EA +LL M G+ V T+N ++ L K++ +++A+ +F M G N T+
Sbjct: 496 ---EARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAANSQTYS 552
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++++ L ++ ++ + D + Y L LC + +A+ ++
Sbjct: 553 IIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHLNEAIHFLYELVDS 612
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
G NP+ +Y++++ + C+ +A + E +NG+ +R
Sbjct: 613 GVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNGLTPDAVTWR 657
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 11/266 (4%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD-DKICDLLIKGWCVDGKLDE 251
+G+ + + +++VE LC+ A +++K N+ D +I ++ ++ C+ E
Sbjct: 366 FGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTE 425
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN--GVPRN 309
+ M + + + N +++ K+ R + EA KVL DM P
Sbjct: 426 LLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVE-------EALKVLNDMMTGKFSAPDA 478
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V TF +IS L + RS++A L +M E G P T+ +++ L++ E + D
Sbjct: 479 V-TFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFD 537
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M + G A + Y + LC +I+ A ++++ D Y ++ C
Sbjct: 538 EMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSG 597
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRV 455
+++A E V +GV Y +
Sbjct: 598 HLNEAIHFLYELVDSGVNPNIVSYNI 623
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 137/348 (39%), Gaps = 63/348 (18%)
Query: 194 GFKRDKDSLRLVVEKLCE-NGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G+ D +L ++ LC+ N + ++L+ + PD++ C++L+ +L +
Sbjct: 80 GYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTSLCVPDERTCNVLV------ARLLHS 133
Query: 253 KRLAREM--------YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
K R + ++ F + YN ++D + C P + A ++L DM
Sbjct: 134 KDPFRTLNVIHRLIEFKPEFVPSLINYNRLID---QFCSVSLP----NVAHRMLYDMINR 186
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS---------- 354
G ++ ++ L++ KI DA KLF M EWG PN ++ +LI+
Sbjct: 187 GHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLRKRDIERG 246
Query: 355 ------LYQAARVGEG--------DEMIDRMKSAG-----YAIGKK-----------DYY 384
L+Q R E D ++D + G + I ++ Y
Sbjct: 247 RELMHVLFQRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYG 306
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ LC + R A V M+ G P +Y+ ++ C +A L +E V
Sbjct: 307 HLIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGF 366
Query: 445 GVEVKPKEYRVDPRYLKKPIAVKKGKK-RETLPEKMARKRRRLKQIRL 491
G + Y+V L + + + K ++ + + K R R+ I L
Sbjct: 367 GYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYL 414
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 12/206 (5%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR-----GGFELGTVAYNCILDCVSKLCR 283
+ P+ LLI+G ++ + L +++ + + A++ ++DC LCR
Sbjct: 223 VVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQRMRHEEDQSVNSAAFDNLVDC---LCR 279
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ L +E + +M + LI +LCK+ RS A ++ Y M + G P
Sbjct: 280 EG----LFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGFTP 335
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ +I L + ++++ GY + + Y + LC +++A V
Sbjct: 336 SVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYKVLVEALCQAMDLDKAREVL 395
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHN 429
+ M G + Y++ + C N
Sbjct: 396 KVMLNKGGMDRTRIYNIYLRALCLMN 421
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 16/218 (7%)
Query: 141 FGRRKD-FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM-ERDY--GFK 196
GR ++ K ++D + T S I L+ GR + +M E+ G
Sbjct: 455 MGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVV 514
Query: 197 RDKDSLR-LVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
LR L +L + A + E + A + + ++++G C G++D AK+
Sbjct: 515 TYNAILRGLFKLQLTKEAMAVFDEMITDGVA----ANSQTYSIIVEGLCESGQIDGAKKF 570
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
E+ Y IL LCR +EA L ++ +GV N+ ++N+
Sbjct: 571 WDEVIWPSKIHDDFVYAAIL---KGLCRSGHL----NEAIHFLYELVDSGVNPNIVSYNI 623
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+I C + +A ++ M + G P+ T+ L K
Sbjct: 624 VIDRACSLGMKREAYQIAGEMQKNGLTPDAVTWRTLDK 661
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 118/301 (39%), Gaps = 8/301 (2%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
+T + RL+ + P + L R+ E F + ++++ C + A +++
Sbjct: 121 RTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHRML 180
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
D N P L+ G+ G++ +A +L EM G +++Y+ + + +
Sbjct: 181 YDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLL---IRGV 237
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVET--FNVLISNLCKIRRSEDAIKLFYRMGEW 339
RK+D R E VL + ++V + F+ L+ LC+ + + M +
Sbjct: 238 LRKRDIER-GRELMHVLFQRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQG 296
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
+ + LI SL + R ++ M+ G+ Y + LC +A
Sbjct: 297 NRVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRA 356
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
+ E+ G+ TY +L+ C +DKA + + G + + Y + R
Sbjct: 357 YQLLEEGVGFGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRA 416
Query: 460 L 460
L
Sbjct: 417 L 417
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 11/267 (4%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWC 244
+E MER +G + + ++ LC++G K ++ E F PD + LI +C
Sbjct: 291 YEEMER-FGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYC 349
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
G+LD+A L + MYR G V+Y +++ + K R + EA ++ M +
Sbjct: 350 RKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVR-------EAHQLFHRMVHR 402
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ ++ T+N LI CK + +++ L + M G P+ T VL++ + +
Sbjct: 403 GLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSA 462
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ ++ G +I + Y + LC R A ++ E+M DGH + E Y+ L+
Sbjct: 463 LNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKS 522
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPK 451
+C + + +A L E V E+KP
Sbjct: 523 FCQCDCIAEALLLKMEMVDK--EIKPN 547
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 27/284 (9%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-------LVKDT--ANEIFPDD 233
L FF ++ D G + + ++V L + S A K LVKD ++F +
Sbjct: 163 LSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKNL 222
Query: 234 KIC-----------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+C D+L+K + G++ E R R M R GF + N +L+ + KL
Sbjct: 223 ILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKL- 281
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+V +ME G+ N+ TFN+L LCK + K +M E G
Sbjct: 282 ------NYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFD 335
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ LI S + R+ + + M G Y + LC R+ +A +
Sbjct: 336 PDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQL 395
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
F +M G +PD TY+ L+ +C ++ ++ +L + + NG+
Sbjct: 396 FHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGI 439
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 116/298 (38%), Gaps = 44/298 (14%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D ++ + V + + ++ L + GR + F RM G D +
Sbjct: 352 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHR-GLSPDIVT 410
Query: 202 LRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ C+ G + L+ D N I PD C +L++G+ +GK A L E+
Sbjct: 411 YNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQ 470
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
R G + Y+ + + LCR+ PF A+ +L M +G +E +N LI +
Sbjct: 471 RFGVSISQDIYSYL---IVALCRENRPF----AAKNLLERMSQDGHKXELEIYNELIKSF 523
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C+ +A+ L M + PN T+ +J L + +R EG+ ++ M ++G
Sbjct: 524 CQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXL--- 580
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
PD E L +C N +DKA +L
Sbjct: 581 --------------------------------PDLEICRALFYGYCRENDIDKAESLL 606
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 14/277 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L+ + + M+ + G + + + ++++ LC+NG A KL+ + +N+
Sbjct: 151 LDALLSQNLFKMINALYNNMKSE-GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKG 209
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PDD +I C G +D+A+ LA + FE YN ++ V K CR K+ F
Sbjct: 210 CDPDDVSYTTVISSMCKLGDVDKARELAMK-----FEPVVPVYNALIHGVCKECRFKEAF 264
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L +E M GV NV +++ +IS L + E ++ +F RM GC PN TF
Sbjct: 265 DLMNE-------MVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTF 317
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LIK + RVG+ + + M G + Y + LC +++A+SV+ +M+
Sbjct: 318 TSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEK 377
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
D P+ TY ++ + + A +++ + G
Sbjct: 378 DSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCG 414
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 7/215 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LIKG+ V G++ +A L M R G VAYN + + LC + EA V
Sbjct: 320 LIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTL---IHGLCSDGNM----DEAISVW 372
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME + + NV T++ +I K A + + +M GC PN + ++ L Q
Sbjct: 373 NQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQM 432
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + ++ID M S G + F+ LC R+E AM+V ++M+ P+ TY
Sbjct: 433 SMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTY 492
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ L+ N +A L E VE Y
Sbjct: 493 NELLDGLFRANAFREACGLIRELEERKVEFDCVTY 527
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 21/297 (7%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG----YASYAE 219
+T S I GR +G + M R+ G + + ++ LC +G S
Sbjct: 315 QTFTSLIKGFFVRGRVGDAVGLWNLMIRE-GVSPNVVAYNTLIHGLCSDGNMDEAISVWN 373
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++ KD+ I P+ +I G+ G L A +M G V Y C++D +
Sbjct: 374 QMEKDS---IRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLC 430
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
++ F L + +M +G P V TFN I LC+ R E A+ + +M ++
Sbjct: 431 QMSMFDQAFDL-------IDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKY 483
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
C PN T+ L+ L++A E +I ++ Y + +Q
Sbjct: 484 ECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQV 543
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
+ + KM +G D+ T + + +C +V A + D KE+R D
Sbjct: 544 LQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNI------SAEKEFRAD 594
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M+ VP + E F +I + E +K+FYR+ E+GC P+ + +++ +L
Sbjct: 96 LLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALL 155
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ + + MKS G Y L LC +++ A + +M G +PD
Sbjct: 156 SQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDV 215
Query: 417 TYDLLMTKWCAHNRVDKANAL 437
+Y +++ C VDKA L
Sbjct: 216 SYTTVISSMCKLGDVDKAREL 236
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I+ L G+ + + +++M G K + + ++ C+ A K+ D
Sbjct: 310 TYNSLINGLCNNGKLEEAIDLWDKM-VGLGLKPNIVTYNALINGFCKKKMMKEATKVFDD 368
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ E+ P+ + +I +C +G ++E L M G YNC+ ++ LCR
Sbjct: 369 VSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCL---IAGLCR 425
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K+D A+++L +ME G+ +V T+N+LI LCK +S +A KL M G P
Sbjct: 426 KQDL----QAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP 481
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ L+ ++ + RM+ Y + C I ++E A +
Sbjct: 482 NHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLL 541
Query: 404 EKMKTDGHNPDSETYDLL 421
+M G NP+ TYD++
Sbjct: 542 NEMLEKGLNPNRTTYDIV 559
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 130/288 (45%), Gaps = 14/288 (4%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTAN 227
C D V A + FE M++ G K + + ++ LC NG A L K
Sbjct: 284 CKDENVAAAKKA-----FEEMQKQ-GLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL 337
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ P+ + LI G+C + EA ++ ++ + + +N ++D K ++
Sbjct: 338 GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 397
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
F L S +LD G+ NV T+N LI+ LC+ + + A +L M G + T
Sbjct: 398 FSLCSS----MLD---EGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +LI L + + +++++ M + G Y + C +++ A++V +M+
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME 510
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ P+ TY++L+ +C N+++ AN L +E + G+ Y +
Sbjct: 511 KERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 558
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 136/309 (44%), Gaps = 37/309 (11%)
Query: 167 ASCIDRLVRAGRPTQ-VLGFFERMERDY----GFKRDKDSLRLVVEKLCENGYASYAEKL 221
A+ +D+L+ AG ++ VL FF+ +++Y G + L + + S+ +
Sbjct: 45 ATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSF 104
Query: 222 VKD---TANEIF-----------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
VK+ T + +F I D+L+ + + +L A GF+L
Sbjct: 105 VKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLS 164
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC---KIR 324
+ N +L + K + D E V +M + N+ TFN+ I+ LC K+
Sbjct: 165 LTSCNPLLSALVKENKIGD-------VEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLN 217
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ---AARVGEGDEMIDRMKSAGYAIGKK 381
++EDAI+ M WG PN T+ L+ + A ++ + + + M + +
Sbjct: 218 KAEDAIE---DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEV 274
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
+ + C E + A FE+M+ G P+ TY+ L+ C + ++++A L+D+
Sbjct: 275 TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 334
Query: 442 VRNGVEVKP 450
V G+ +KP
Sbjct: 335 V--GLGLKP 341
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I + G+++ A + M GF V +N +++ KL D A+
Sbjct: 429 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHD-------AKA 481
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
L + +G+ +V TF LI LC + +DA F M EWG PN T+ VLI L
Sbjct: 482 FLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLC 541
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMKTDGHNP 413
A V + E++++MK G D Y F + C + +IE+A +F M G +P
Sbjct: 542 SAGHVSKAIELLNKMKMDGIT---PDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSP 598
Query: 414 DSETYDLLMTKWCAHNRVDKANALF 438
DS TY+ L+ C RVD+A +
Sbjct: 599 DSYTYNALIKALCDERRVDEAKEII 623
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 198 DKDSLRLVVEKLCENGY--ASYAEKLVKDTANEIFPDDKICDL----------------- 238
DK+++ L +K+ + GY S +V A ++ +C+L
Sbjct: 336 DKEAVELA-KKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYI 394
Query: 239 -LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+IK + + +A + +M G +YN ++DC +K E E+
Sbjct: 395 MIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAK----------AGEVERA 444
Query: 298 LLD---MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
L M+ +G N+ TFN LI+ K+ DA + E G P+ TF LI
Sbjct: 445 LETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDG 504
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L ++ + M G + Y + LC + +A+ + KMK DG PD
Sbjct: 505 LCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPD 564
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +++ + +C +++KA LF++ R G V P Y
Sbjct: 565 AYSFNAPILSFCRMRKIEKAQKLFNDMSRYG--VSPDSY 601
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 10/215 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID +AG + L + M+ + GF + + ++ + G A+ +K
Sbjct: 432 IDCFAKAGEVERALETIKVMQ-ESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHG 490
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD LI G C +LD+A EM G YN + + LC
Sbjct: 491 LMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVL---IHGLCSAGHV- 546
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
S+A ++L M+ +G+ + +FN I + C++R+ E A KLF M +G P+ T+
Sbjct: 547 ---SKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTY 603
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
LIK+L RV E E+I M+S IG K +
Sbjct: 604 NALIKALCDERRVDEAKEIILAMESIS-CIGTKQH 637
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGW 243
+F +M D G +S +V++ + G A + +K F P+ + LI G+
Sbjct: 412 YFSQMVSD-GLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGY 470
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
G + +AK + + G + + ++D + + D F SE M
Sbjct: 471 LKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSE-------MSE 523
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
GV NV+T+NVLI LC AI+L +M G P+ +F I S + ++ +
Sbjct: 524 WGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEK 583
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++ + M G + Y + LC R+++A + M++
Sbjct: 584 AQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMES 628
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 12/309 (3%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPKTLA--SCIDRLVRAGRPTQVLGFF 186
++E L + +GR H+ V + L P T + I VRAG F
Sbjct: 144 SEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRF 203
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCV 245
++M D G + D + +V +C G A +LVK I P+ +L+ G+C
Sbjct: 204 QQMPAD-GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCN 262
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
+++EA + M G Y ++ + K+ +R+ SE +E +
Sbjct: 263 ASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEW------IESDP 316
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
++ ++ L+ L K ++A++L +M + G TTF ++I + +
Sbjct: 317 TLHSI-AYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLC 375
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
E++D G +G Y + + I +A F +M +DG E+Y++++ +
Sbjct: 376 ELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCF 435
Query: 426 CAHNRVDKA 434
V++A
Sbjct: 436 AKAGEVERA 444
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 7/205 (3%)
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA LA++M + G+ LG+ ++ ++ C K+ D L D G
Sbjct: 338 EAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVD-------DFIKKGGNLGF 390
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+ + ++I + + + A K F +M G + ++ ++I +A V E I
Sbjct: 391 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKV 450
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ +G++ + + + + A + + + G PD T+ L+ C ++
Sbjct: 451 MQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQ 510
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+D A F E GV + Y V
Sbjct: 511 LDDAFNCFSEMSEWGVRPNVQTYNV 535
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+ ++ D+ G + E L+ + ++ + A ++F ++ G P+ + +I
Sbjct: 129 SAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIA 188
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEKMKTDG 410
+ +A V +M + G + D + + T + G+ R +++A+ + ++M+ G
Sbjct: 189 ASVRAGAVDAAYLRFQQMPADG---CRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAG 245
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
P+ TY +L+ +C +RV++A + + GV YR
Sbjct: 246 IRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYR 289
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ + PD +I G+C +G +DEA L
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G + T++Y +L + R D AE ++ M G P N TFN L
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVD-------AEDLMSQMIQQGCPLNPITFNTL 478
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + L RI + + +F+ ++ D+ Y+ +++ C ++A
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET-LPEKMARKRRRLKQ 488
V +G Y + R L VK+ ++ T L K A ++ +K
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 651
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 9/274 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L GR L + M R G +++E C G A ++++D A
Sbjct: 132 LCARGRIADALAVLDEMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCAL 190
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D C+L++ C G +D+A L R++ G E V+YN +L LC K R
Sbjct: 191 DVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVL---KGLCMAK---RWG 244
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
++++ +M P N+ TFN LIS LC+ E ++ +M E GC P+ + +
Sbjct: 245 C-VQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATI 303
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + + + E+++RM S G Y L LC ER E+ + +M
Sbjct: 304 IDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
D T+++L+ +C + VD+ L ++ + +G
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHG 397
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 205 VVEKLCENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC NG + E L + + PD ++ +I G C +G L A + M G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYG 327
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V YN +L LC + R + E E++L +M P + TFN+L+ C+
Sbjct: 328 LKPNVVCYNTLL---KGLCSAE---RWE-ETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ I+L +M GC P+ T+ +I + + E ++ M + G Y
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
L LC ER A + +M G + T++ L+ C V++A L + +
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500
Query: 444 NG 445
NG
Sbjct: 501 NG 502
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 116/301 (38%), Gaps = 35/301 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G D + LV+ +C+ G A L++D + PD + ++KG C+ +
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE------------------- 293
+ L EM R V +N + +S LCR R+
Sbjct: 247 QELMEEMVRMACPPNIVTFNTL---ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATI 303
Query: 294 ------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
A ++L M G+ NV +N L+ LC R E+ +L M + C
Sbjct: 304 IDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
++ TF +L+ Q V E++++M G Y + C I++A+
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVM 423
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ + M G P++ +Y +++ C+ R A L + ++ G + P + +L
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483
Query: 462 K 462
K
Sbjct: 484 K 484
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 60/138 (43%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
VP N T+ ++ LC R DA+ + M GC P + V++++ +
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+++ + + G A+ + L +C +++A+ + + + G PD +Y+ ++
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 426 CAHNRVDKANALFDEAVR 443
C R L +E VR
Sbjct: 238 CMAKRWGCVQELMEEMVR 255
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 65/169 (38%), Gaps = 6/169 (3%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +++ C+ + E A +L PN T+ ++++L R+ + ++D M
Sbjct: 93 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G A Y+ L C A+ V E + G D +L++ C VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
KA L + G E Y LK K+ + L E+M R
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNA---VLKGLCMAKRWGCVQELMEEMVR 255
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 121/284 (42%), Gaps = 9/284 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-P 231
+VR G + F ++ G +L +++ C + S+A L+ F P
Sbjct: 65 IVRMGHYPTAISLFSQLHSK-GITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQP 123
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ + LI G+C++G + +A ++ G+ L +Y +++ + K + +D +L
Sbjct: 124 NMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQL- 182
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
L ME + V N+ T++ +I LCK R DA++LF + G + + L
Sbjct: 183 ------LQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL 236
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + E ++ M + + LC RI +A VF M G
Sbjct: 237 IHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE 296
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD TY+ LM +C N V +A LF+ V+ G+E Y V
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNV 340
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 123/291 (42%), Gaps = 12/291 (4%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK-DT 225
S I+ L + G+ L ++ME D + + + V++ LC++ + A +L T
Sbjct: 164 GSLINGLCKNGQTRDALQLLQKMEEDL-VRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ I D + LI G C G+ EA RL M RG +N ++D + K R
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRI- 281
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
EA+ V M G ++ T+N L+ C +A +LF RM + G P+
Sbjct: 282 ------VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ VLI + V E + ++ Y + LC + R+ + ++
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
M G +PD TY++ + +C +KA +LF + V+ + P Y D
Sbjct: 396 MCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQG---IWPDFYMYD 443
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 11/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGF-FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T + I+ G ++ + F + M + G+ D+ S ++ LC+NG A +L++
Sbjct: 127 TFNTLINGFCINGMVSKAMAFRLDLMAK--GYPLDEFSYGSLINGLCKNGQTRDALQLLQ 184
Query: 224 DTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
++ P+ +I G C D + +A RL + G + VAYN ++ C
Sbjct: 185 KMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLI----HGC 240
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+R EA ++L M + + TFN+L+ LCK R +A +F M + G
Sbjct: 241 CSVGQWR---EATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEK 297
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ L++ + V E E+ +RM G +Y + C I+ +++AM +
Sbjct: 298 PDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVL 357
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
F++++ P+ TY+ L+ C R+ L DE G
Sbjct: 358 FKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 10/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L + GR + G F M + G K D + ++E C + S A +L
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKR-GEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRG 330
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD ++LI G+C +DEA L +E+ YN ++D + KL R
Sbjct: 331 LEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRM---- 386
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
S ++++ +M G ++ T+N+ + CK + E AI LF ++ + G P+ +
Sbjct: 387 ---SCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMY 442
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
V++++ + ++ +E + + G + Y + LC ++AM++ KM
Sbjct: 443 DVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDD 502
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ PD+ T++ ++ N DKA L E + G+
Sbjct: 503 NDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540
>gi|326513966|dbj|BAJ92133.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 160/392 (40%), Gaps = 49/392 (12%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL- 154
+P ++ ++ +G A + W +A + +T + GRRK F ++ L
Sbjct: 102 SPEVLSDVVSRGNLSGSATVDLLDWAICSAKLRPSVQTCNIVVRALGRRKFFTSVEPALE 161
Query: 155 VDNKEVLGP--KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRD---KDSLRLVVEKL 209
V K + P TL +D LV A + + + E + G ++ K++ ++E L
Sbjct: 162 VMRKNGVFPDLTTLQIIMDTLVAARQVNKAVQMLESDQFGIGIEKTCHRKEAFSALIECL 221
Query: 210 CENGYASYAEKLVKDTANEIFPDDK-ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C + A LV+ + F DK + + ++ GW G++D+ + M G
Sbjct: 222 CRRSHVGVASSLVQAARGQPFHLDKQVYNDVLGGWARFGRVDKLQHFWAMMLEDGLVPDD 281
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V++ +++ + + + + EA +V M G +N L+ N + +
Sbjct: 282 VSHCHLIEALGRAGQAE-------EALRVFEKMVQEGYGPTTMAYNALVFNFISVGDLDR 334
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM----------------- 371
+IK + M + C PN T+ +I++L + RV + +M D M
Sbjct: 335 SIKYYKDMVDNNCPPNSDTYCKMIRALLKTRRVADALQMFDDMLAQGVLPDTGIITSFIE 394
Query: 372 ------------------KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ AG I K Y L RL + ++++E+M+ G+
Sbjct: 395 PLCTFGPPHAALMIYQKSRKAGCTISLKTYKLLLERLARFGKSGTVLNIWEEMQESGYPS 454
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
D E Y+ ++ C +VD A + +E++R G
Sbjct: 455 DKEIYEFIVNGLCNVGKVDAAVFVVEESLRKG 486
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEA-KRLAREMYRGGFELGT---VAYNCILDCVSKLC 282
N +FPD +++ ++++A + L + + G E A++ +++C LC
Sbjct: 166 NGVFPDLTTLQIIMDTLVAARQVNKAVQMLESDQFGIGIEKTCHRKEAFSALIEC---LC 222
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNV--ETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
R+ S L G P ++ + +N ++ + R + + M E G
Sbjct: 223 RRSHVGVASS------LVQAARGQPFHLDKQVYNDVLGGWARFGRVDKLQHFWAMMLEDG 276
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P++ + LI++L +A + E + ++M GY Y + + +++++
Sbjct: 277 LVPDDVSHCHLIEALGRAGQAEEALRVFEKMVQEGYGPTTMAYNALVFNFISVGDLDRSI 336
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ M + P+S+TY ++ RV A +FD+ + GV
Sbjct: 337 KYYKDMVDNNCPPNSDTYCKMIRALLKTRRVADALQMFDDMLAQGV 382
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
+ S I+ L G P L +++ R G + +L++E+L G + + ++
Sbjct: 389 ITSFIEPLCTFGPPHAALMIYQK-SRKAGCTISLKTYKLLLERLARFGKSGTVLNIWEEM 447
Query: 226 ANEIFPDDK-ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+P DK I + ++ G C GK+D A + E R GF LG V Y+
Sbjct: 448 QESGYPSDKEIYEFIVNGLCNVGKVDAAVFVVEESLRKGFCLGRVVYS 495
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 20/318 (6%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFK---AIHDFLVDNKEVL-GPKTLASCI 170
L F +W+ + + F HT ET + D G+ +F+ A+ + ++ N E L T
Sbjct: 25 LEFFNWVEKESGFRHTTETFNRMIDILGKYFEFETCWALINRMIGNPESLPNHVTFRIVF 84
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV--KDTANE 228
R V A + + +++++ D+ RD S +V+ LCE+ + AE+L K+
Sbjct: 85 KRYVTAHLVQEAIDAYDKLD-DFNL-RDDTSFYNLVDALCEHKHVVEAEELCFGKNVIAH 142
Query: 229 IFP--DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
F + KI +L+++GW G + K +M G +Y+ +D +C+
Sbjct: 143 GFSVSNTKIHNLILRGWSKLGWWGKCKEYWDKMDTEGVPKDLFSYSIYMDI---MCKSGK 199
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
P++ A K+ +M+ + +V +N +I + + E I++F M E GC PN
Sbjct: 200 PWK----AVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVA 255
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T +IK L + R+ + M+D M G Y +RL E+ + +S+F +M
Sbjct: 256 THNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDSISYMCLFSRL---EKPSEILSLFGRM 312
Query: 407 KTDGHNPDSETYDLLMTK 424
G P +TY +LM K
Sbjct: 313 IRSGVRPKMDTYVMLMRK 330
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 8/250 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ +C+ G AE L+ + ++ + + + LI G+C G +DEA + M + G
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F+ N I C ++L R EA++ L M GV + ++ LI CK
Sbjct: 430 FQADVFTCNTIASCFNRLKRY-------DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE 482
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
E+A +LF M G PN T+ V+I + + ++ E ++ M++ G Y
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C + +++AM +F +M G + +S TY ++++ + D+A L+DE R
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
Query: 444 NGVEVKPKEY 453
G + K Y
Sbjct: 603 KGYTIDNKVY 612
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 147/356 (41%), Gaps = 19/356 (5%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + + + +++DF + L K+ V T ++ V+ G+ + F+ M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGK 248
R+ G + D ++ C G A L + T + P LI G C G+
Sbjct: 321 -RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+ A+ L EM G + V +N ++D CRK + EA + ME G
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLID---GYCRKG----MVDEASMIYDVMEQKGFQA 432
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T N + S +++R ++A + +RM E G + ++ LI + V E +
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M S G Y + C +I++A + M+ +G +PDS TY L+ C
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET--LPEKMARK 482
+ VD+A LF E G++ Y V L K GK E L ++M RK
Sbjct: 553 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA-----GKSDEAFGLYDEMKRK 603
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 12/290 (4%)
Query: 168 SCIDRLVRAGRPTQV---LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
SCI LV A + ++ L F RM D G K SL +VVE LC G ++KL+K+
Sbjct: 191 SCIVFLVAAKKRRRIDLCLEIFRRM-VDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKE 249
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I P+ + +I + + + + M + G V Y +++ K +
Sbjct: 250 FSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGK 309
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D AEK+ +M G+ +V + LIS C+ + A LF + E G P
Sbjct: 310 MSD-------AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSP 362
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI + + +G + +++ M+S G I + + + C +++A ++
Sbjct: 363 SSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY 422
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ M+ G D T + + + + R D+A + GV++ Y
Sbjct: 423 DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSY 472
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D++ C + + ++D + R M G ++ + + V LCR+ +
Sbjct: 188 DERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV---VEGLCRRGEV---- 240
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+++K++ + G+ T+N +I+ K R + M + G N+ T+ +L
Sbjct: 241 EKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLL 300
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
++ + ++ + +++ D M+ G Y ++ C +++A +F+++ G
Sbjct: 301 MELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGL 360
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+P S TY L+ C + A L +E GV +
Sbjct: 361 SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 152/387 (39%), Gaps = 34/387 (8%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAI 150
+ V +P LV++ L AG F W + +SH+ + + + ++ +
Sbjct: 38 TGVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIV 97
Query: 151 HDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
D + + K +L +T + + RA + + + F M++ Y + + ++
Sbjct: 98 WDLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDK-YDVVPNLAAFNGLLSA 156
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
LC++ A+++ + PD+K +L++GW L A+ + REM G +
Sbjct: 157 LCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDV 216
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSE----------------------------AEKVLLD 300
V Y ++D + K R + + E A L+
Sbjct: 217 VTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLE 276
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+ +V +N LI CK+ + ++ ++ M G PN T V+I S+ +
Sbjct: 277 MAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQ 336
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRL-CGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+ RM D Y + ++ C +E A+ +++ MK+ P T+
Sbjct: 337 TDRAFRVFCRM--IKLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFS 394
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGV 446
L+ C + KA + +E + G+
Sbjct: 395 ALIKGLCEKDNAAKACVVMEEMIEKGI 421
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 38/310 (12%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ + G + M G D + VV+ LC +G A ++V++
Sbjct: 47 TYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVRE 106
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD LI GWC K+DEA +L +E+ L V+ + + ++ LCR
Sbjct: 107 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSAL---ITGLCR 163
Query: 284 KK---DPFRLDSEAE-------------------------------KVLLDMEYNGVPRN 309
++ + + L E E K+L ME N
Sbjct: 164 ERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPN 223
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V T++ L+ LCK + A+ LF RM GC PN T+ LI L A +V ++D
Sbjct: 224 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 283
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M + Y L C + RIE+A +F++M PD TY L+ +C +
Sbjct: 284 EMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNAS 343
Query: 430 RVDKANALFD 439
R+++A L +
Sbjct: 344 RLEEARFLLE 353
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 48/278 (17%)
Query: 204 LVVEKLCENGYASYAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY- 260
+VV LC+ S A +++K+ + PD +I G+C G++D A + REM
Sbjct: 14 VVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVT 73
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
R G V Y ++D LCR ++D E V +M+ GV + TF+ LI+
Sbjct: 74 RDGMAPDVVTYTSVVD---GLCRDG---KMDRACEMV-REMKLKGVEPDKFTFSALITGW 126
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR---------- 370
C R+ ++A+KL+ + C + + LI L + R+GE E+
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186
Query: 371 ----------------------MKSAGYAIGKK------DYYEFLTRLCGIERIEQAMSV 402
MK G G+K Y L LC ++QA+ +
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
F +M + G P+ TY L+ CA ++VD A L DE
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDE 284
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 142/372 (38%), Gaps = 68/372 (18%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRA 176
F+ +T N DE L + + A+ ++ I L R
Sbjct: 119 FSALITGWCNARKVDEALKLYKEILTSSCRLDAVSS--------------SALITGLCRE 164
Query: 177 GRPTQVLGFFERME--RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDD 233
R + F+ ME D +K D + +++ C++G A K++ + P+
Sbjct: 165 RRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNV 224
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC--RKKDPFRLD 291
L+ G C G LD+A L R M G V Y + + LC K D RL
Sbjct: 225 VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL---IHGLCAAHKVDAARL- 280
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
++ +M P + ++N L+ C++ R E+A +LF M C P+ T+ L
Sbjct: 281 -----LMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCL 335
Query: 352 IKSLYQAARVGEGDEMIDRMKS---------------AGYAIGKK--------------- 381
++ A+R+ E +++ MK+ AGY+ K+
Sbjct: 336 VRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN 395
Query: 382 ------DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC R+ AM V + + PD TY +++ C +R ++A
Sbjct: 396 VAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRTEEAL 451
Query: 436 ALFDEAVRNGVE 447
L +E V VE
Sbjct: 452 TLLEEMVNKRVE 463
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 20/288 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S + L +AG Q L F RM G + + ++ LC A L+ +
Sbjct: 226 TYSSLLHGLCKAGDLDQALDLFRRMTSK-GCVPNVVTYTTLIHGLCAAHKVDAARLLMDE 284
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D + + L+ G+C G+++EAK+L +EM + Y C+ V C
Sbjct: 285 MTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCL---VRGFC- 340
Query: 284 KKDPFRLDSEAEKVLLDME-YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ RL+ EA +L +M+ G+ +V T++++++ + +R +A + M
Sbjct: 341 --NASRLE-EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 397
Query: 343 PNETTFLVLIKSLYQAARVGEGDEM---IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
PN T+ LI L +A RV E+ +D+ Y I + LCG +R E+A
Sbjct: 398 PNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTI-------VIEGLCGTDRTEEA 450
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+++ E+M P T++ ++ C +D+A L +G+E
Sbjct: 451 LTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 498
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 17/251 (6%)
Query: 133 TLSFFTDYFGRRKDFKAIHDF---LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T S + R K F +F ++ T +S ID L +AGR + + +
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV 426
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
+ K D + +V+E LC A L+++ N+ + P + +I C G
Sbjct: 427 D-----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGD 481
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL----DSEAEKVLLDMEYN 304
+DEA +L M G E G V Y +L+ S+ R + + L +A+K N
Sbjct: 482 MDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKS--SSAAN 539
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
VP + F+ LI LCK R + A+ + + C P E L ++ L +A R E
Sbjct: 540 LVPE--QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 597
Query: 365 DEMIDRMKSAG 375
++I+ + G
Sbjct: 598 GKLINSISKVG 608
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 21/280 (7%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TAN 227
+D R GR + F+ M D+ + +V C A L+++ TA
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLP-DRITYTCLVRGFCNASRLEEARFLLENMKTAA 359
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
I PD +++ G+ + EA +EM V Y+ ++D + K R
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ +K P +V T+ ++I LC R+E+A+ L M P+ T
Sbjct: 420 MEVLKNVDK----------P-DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGT 468
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F +I +L + + E +++ M + G G Y L R+E A +FE M+
Sbjct: 469 FNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 528
Query: 408 TDGHNPDS-------ETYDLLMTKWCAHNRVDKANALFDE 440
S + + L+ C +DKA A+ +E
Sbjct: 529 RKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEE 568
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW-GCHPNETTFLVLIKSLYQAARVGEG 364
V N T+NV+++ LCK R + A ++ M + P+ T+ +I + +
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 365 DEMIDRMKSA-GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
E++ M + G A Y + LC ++++A + +MK G PD T+ L+T
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 424 KWCAHNRVDKANALFDE 440
WC +VD+A L+ E
Sbjct: 125 GWCNARKVDEALKLYKE 141
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSA-GYAIGKKDYYEFLTRLCGIERIEQAMS 401
PNE T+ V++ L +A + E++ M+ A Y + C +++A
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 402 VFEKMKT-DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ +M T DG PD TY ++ C ++D+A + E GVE
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVE 113
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 18/310 (5%)
Query: 156 DNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
D K + T + I L + + L F R + GF+ DK +V+ C+ G
Sbjct: 251 DTKLLADQVTYNTLIHMLCKHQHADEALQFL-REAQKRGFQVDKVGYSAIVDSYCKEGRM 309
Query: 216 SYAEKLVKDTANEIF-----PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
A+++V NE+F PD +I G+ G++ +A+++ ++MY+ G + TV+
Sbjct: 310 DQAKEIV----NEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVS 365
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y L LC+K + SEA +++ E N T++V++ + + DA
Sbjct: 366 YTAFL---KGLCQKGNS----SEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDAC 418
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+ M G P +L++SL + RV E + ++ + G A+ ++ + R
Sbjct: 419 DVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRF 478
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C + IE A+S+ + M +PD+ TY ++ R+++A L + ++ G++ P
Sbjct: 479 CQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTP 538
Query: 451 KEYR-VDPRY 459
YR V RY
Sbjct: 539 VTYRTVIHRY 548
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 156/373 (41%), Gaps = 37/373 (9%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDF---KAIHDFLVDN----------KEVLGP 163
+N + H DE L F + +++ F K + +VD+ KE++
Sbjct: 261 YNTLIHMLCKHQHADEALQFLRE--AQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNE 318
Query: 164 KTLASCIDRLV----------RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
CI +V +AG Q ++M + +G K + S ++ LC+ G
Sbjct: 319 MFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYK-HGCKPNTVSYTAFLKGLCQKG 377
Query: 214 YASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+S A +++K + + + + I +++ G+ +GKL +A + REM GF V N
Sbjct: 378 NSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEIN 437
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+L LCR R+D EA+K + + G N F +I C+ E A+ L
Sbjct: 438 LLL---QSLCRIG---RVD-EAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSL 490
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M HP+ T+ +I +L + R+ E E+ +M G Y + R
Sbjct: 491 LDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQ 550
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
I R+E +++ +KM T ++ ++ K C ++ A+ L + +R +
Sbjct: 551 IGRVEDLLNLLDKMLT--RQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANT 608
Query: 453 YRV-DPRYLKKPI 464
V YL+K I
Sbjct: 609 CHVLMESYLRKGI 621
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 69/160 (43%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A +VL M+ G+ N+ N I L E A++ RM G PN T+ LIK
Sbjct: 137 AMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIK 196
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
RV + E+I M G + K YY + LC RI + M V EKM+
Sbjct: 197 GYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLA 256
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
D TY+ L+ C H D+A EA + G +V Y
Sbjct: 257 DQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGY 296
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P D C ++ + GKL A ++ M + G E + N + + +
Sbjct: 118 PQDFCCVMV--SYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMA-------NM 168
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A + L M+ G+ NV T+N LI C + R EDA++L M GC P++ ++
Sbjct: 169 LEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYT 228
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++ L + R+ E ++I++M+ + Y + LC + ++A+ + + G
Sbjct: 229 VMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRG 288
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
D Y ++ +C R+D+A + +E G
Sbjct: 289 FQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRG 323
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 125/305 (40%), Gaps = 9/305 (2%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I LV A + L F ERM+ G + + +++ C+ A +L+ +
Sbjct: 158 TAIHVLVMANMLEKALRFLERMQL-LGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPL 216
Query: 228 EIFPDDKICDLLIKGW-CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ DK+ + G+ C + ++ E + +M V YN + + LC+ +
Sbjct: 217 KGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTL---IHMLCKHQH 273
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
EA + L + + G + ++ ++ + CK R + A ++ M GC P+
Sbjct: 274 A----DEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVV 329
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +I QA VG+ +M+ +M G Y FL LC +A + +
Sbjct: 330 TYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKAS 389
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAV 466
+ P++ TY ++M + ++ A + E + G P E + + L + V
Sbjct: 390 EEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRV 449
Query: 467 KKGKK 471
+ KK
Sbjct: 450 DEAKK 454
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + +D L + GR M + G ++++ ++V C+ G+ A +++
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD-CV--SK 280
T N + PD ++LI G C +G+++EA +L EM V+YN +++ C+ SK
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ SEA K+L +M GV N T N+++ CK + +DA +M E G
Sbjct: 364 I----------SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ T+ LI +A +GE +D M + L LC +++E+A
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + G+ D +Y L+ + VD+A L+DE
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 132/306 (43%), Gaps = 11/306 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G K+ + + + N + T I+ L GR + + ME + D
Sbjct: 291 MGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLKLLPDVV 349
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
S ++ E S A KL+++ + + + P+ ++++K +C +GK+D+A +M
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFR-LDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
GF V YN +++ K + FR +D K +M+ + V T N ++
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK---NMKMDSV-----TLNTILR 461
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC+ ++ E+A KL + G +E ++ LI ++ V ++ D MK
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC + EQA+S ++ G PD TY+ ++ +C V+KA
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581
Query: 439 DEAVRN 444
++ V N
Sbjct: 582 NKMVEN 587
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 149/343 (43%), Gaps = 35/343 (10%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY--------ASY 217
L + I V++G+P F++M+R LRL L N +S+
Sbjct: 138 LDTAIGAYVQSGQPHHAFQIFKKMKR----------LRLRPNLLTCNTLLNSLVRYPSSH 187
Query: 218 AEKLVKDTANE-----IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ ++ N+ I P+ +++I G+C++ K +A M + V YN
Sbjct: 188 SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYN 247
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
ILD LC+K RL +A +L+DM+ G+ N T+N+L+ CK+ ++A +
Sbjct: 248 TILDA---LCKKG---RL-GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M + P+ T+ +LI L R+ E ++ D M++ Y +
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+I +A + E+M G P++ T+++++ +C ++D A+ + +G
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 453 YR-VDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIRLSFV 494
Y + Y K A G+ T+ E M RK ++ + L+ +
Sbjct: 421 YNTLINGYCK---AGNMGEAFRTMDE-MGRKNMKMDSVTLNTI 459
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ +AG + + M R K D +L ++ LC A KL+
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRK-NMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
F D+ LI G+ DG +D A +L EM TV YNCI+ + + C
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQ-CG 537
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K + +A L ++ +G+ + T+N ++ C+ E A + +M E P
Sbjct: 538 KTE------QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKP 591
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T +L++ L + + ++ + S G AI Y +T LC R++ A ++
Sbjct: 592 DVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLL 651
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+M+ PD TY+ ++T R+ +A + + G
Sbjct: 652 SEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 9/287 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I+ + + ++ E M + G K + + ++V+ C+ G A +
Sbjct: 353 TLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411
Query: 228 EIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
F PD + LI G+C G + EA R EM R ++ +V N IL LCR+K
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL---RTLCREK- 467
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+L+ EA K+L G + ++ LI K + A+KL+ M E P+
Sbjct: 468 --KLE-EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTV 524
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +I L Q + + ++ + +G + Y L C +E+A KM
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ PD T ++L+ C ++KA LF+ V G + Y
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTY 631
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 46/280 (16%)
Query: 180 TQVLGFFERMERDYGFK-----RDKD------SLRLVVEKLCENGYASYA-EKLVKDTAN 227
T ++G+F+ D K ++K+ + ++ LC+ G A KL + +
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKK 285
+ PD+ + ++ G+C +G +++A + +M F+ N +L C+ + K
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEK- 611
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
A K+ G + T+N LI++LCK R +DA L M E P+
Sbjct: 612 --------ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDH 663
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGY---AIGKKD-------------------- 382
T+ +I +L + R+ E +E + +M G + + D
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVA 723
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y E++ LC + + AM +F + K G D TY LM
Sbjct: 724 YSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 97/253 (38%), Gaps = 54/253 (21%)
Query: 158 KEVLGPKTLASCI-DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
KE++ +CI L + G+ Q + + + G D+ + ++ C G
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNTILHGYCREGDVE 575
Query: 217 YAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A + K N PD C++L++G C++G L++A +L G + TV YN ++
Sbjct: 576 KAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLI 635
Query: 276 DCVSKLCRKKDPFRLDSEAEK------------VLLDMEYNGVPRNVETF---------- 313
+ K R D F L SE E+ ++ + +G R E F
Sbjct: 636 TSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXL 695
Query: 314 --NVL---------------------------ISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
VL I LC + +DA+++F + G +
Sbjct: 696 PXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVD 755
Query: 345 ETTFLVLIKSLYQ 357
++T++ L+ L +
Sbjct: 756 KSTYINLMDGLIK 768
>gi|449469180|ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449484825|ref|XP_004156991.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 579
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 176/440 (40%), Gaps = 47/440 (10%)
Query: 21 FISPQSTYFSRFSPTHYLNFLSKPFSSKPTS-------NPKTIDDPDQV--IARSLSGE- 70
F S +FS T+++ + + +PTS +P T+ D V + LS +
Sbjct: 19 FHGSSSHFFSTSKTTNHIAIAPRALARRPTSRTAPTPRSPNTLGSSDVVNSVCSLLSNKN 78
Query: 71 -LLENLEADPLPISQRLHLI--FSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANF 127
NL+ D HL+ F + ++Q +N+ L F W F
Sbjct: 79 PQTPNLDLD--------HLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFSWSGLQMGF 130
Query: 128 SHTDETLSFFTDYFGRRK---DFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLG 184
+ + D+ GRRK D K + ++ +K + +T + CI L R GR + L
Sbjct: 131 RFDASVVEYMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLGRQGRVREALC 190
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-----PDDKICDLL 239
FE ME +G K D ++ LC+ +L+ DTA +IF PD +
Sbjct: 191 LFEEMEPKFGCKPDNLVFNNMLYALCKK---EPTGELI-DTALKIFRRIELPDKYSYSNV 246
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
I G C G+ A EMYR G A N ++ + L K + EKV +
Sbjct: 247 IIGLCKFGRYSTAIEAFGEMYRAGLVPTRTAVNILIGNLCSLSAK------EGAVEKVRV 300
Query: 300 DMEYNGVPRNVETFNVLISNLC-KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ Y F VL+ N+ K E A+ +F+ + P+ + LI L +
Sbjct: 301 NSTY-------RPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRL 353
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ E ++ ++ ++ Y + LC +++A +F +M + G P Y
Sbjct: 354 GQMQEAIRVLKVVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAIY 413
Query: 419 DLLMTKWCAHNRVDKANALF 438
+ ++ C +D A +F
Sbjct: 414 NYVICMLCKLGNLDSAERVF 433
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 8/247 (3%)
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
L ++ LC++G S A +L N+ F D K + L+ G C GKL+E R+ +E+
Sbjct: 465 LTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEIL 524
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
GF + V+YN + +S C K +LD EA + +M G+ + T+++LI L
Sbjct: 525 GRGFVMDRVSYNTL---ISGCCGNK---KLD-EAFMFMDEMVKKGLKPDNYTYSILIRGL 577
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
+ + E+AI+ + G P+ T+ V+I +A R EG ++ D M S
Sbjct: 578 LNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNT 637
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C R+ A+ + E MK G +P+S TY L+ +RV++A L +E
Sbjct: 638 VVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEE 697
Query: 441 AVRNGVE 447
G+E
Sbjct: 698 MRMEGLE 704
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 129/295 (43%), Gaps = 9/295 (3%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
G L + I L + G+ ++ + + + + GF D + ++ LCE G ++
Sbjct: 461 GGGLLTTLISGLCKHGKHSKAVELWLKF-LNKGFLVDTKTSNALLHGLCEAGKLEEGFRI 519
Query: 222 VKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
K+ F D++ + LI G C + KLDEA EM + G + Y+ ++ +
Sbjct: 520 QKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLN 579
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ + + EA + D + NG+ +V T++V+I CK R+E+ KLF M
Sbjct: 580 MNKVE-------EAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNN 632
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN + LI + ++ R+ E+ + MK G + Y + + I R+E+A
Sbjct: 633 LQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 692
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ E+M+ +G P+ Y L+ + ++ K L E V Y V
Sbjct: 693 LLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 747
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + I +C GK++EA L +M G V YN ++D + R + F
Sbjct: 248 VSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAF 307
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ M GV + T+++L+ L K +R DA + M E G PN +
Sbjct: 308 MFKEK-------MVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVY 360
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI SL +A + + E+ D M S G ++ Y + C + + A + ++M +
Sbjct: 361 NNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLS 420
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKA 434
G N + ++ ++ C+H+ D A
Sbjct: 421 IGFNVNQGSFTSVICLLCSHHMFDSA 446
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA ++ ME GV NV T+N +I L R ++A +M E G P T+ +L+
Sbjct: 270 EAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILV 329
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
K L +A R+G+ ++ M G+ Y + L + +A+ + + M + G +
Sbjct: 330 KGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLS 389
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
S TY+ L+ +C + D A L E + G V +
Sbjct: 390 LTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSF 430
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 129/325 (39%), Gaps = 12/325 (3%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDF-LVDNKEVLGPKTLASCI-DRLVRAGRPTQVLGFFE 187
+D + + F R + A+ F ++ NK + KT + + LVRA + F
Sbjct: 183 SDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFH 242
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVD 246
+ + G D + C+ G A E K + P+ + +I G +
Sbjct: 243 VVCK--GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMS 300
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+ DEA +M G E + Y+ ++ ++K R D + VL +M G
Sbjct: 301 GRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAY-------CVLKEMTEKGF 353
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P NV +N LI +L + AI++ M G +T+ LIK ++ + +
Sbjct: 354 PPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAER 413
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ M S G+ + + + + LC + A+ +M +P L++ C
Sbjct: 414 LLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 473
Query: 427 AHNRVDKANALFDEAVRNGVEVKPK 451
H + KA L+ + + G V K
Sbjct: 474 KHGKHSKAVELWLKFLNKGFLVDTK 498
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 13/291 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
T + ID L +GR + F E+M ER G + + ++V+ L + A ++K
Sbjct: 289 TYNTVIDGLGMSGRYDEAFMFKEKMVER--GVEPTLITYSILVKGLTKAKRIGDAYCVLK 346
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + FP + I + LI G L++A + M G L + YN + + C
Sbjct: 347 EMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL---IKGYC 403
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ AE++L +M G N +F +I LC + A++ M
Sbjct: 404 KSGQA----DIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMS 459
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P LI L + + + E+ + + G+ + K L LC ++E+ +
Sbjct: 460 PGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRI 519
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+++ G D +Y+ L++ C + ++D+A DE V+ G +KP Y
Sbjct: 520 QKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKG--LKPDNY 568
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 15/225 (6%)
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMY-----RGGFELGTVAYNCILDCVSKLCRKKDPF 288
K+ DLLI+ +C K D LA +++ +G F T N +L + L R + F
Sbjct: 181 KMSDLLIEVYCTQFKRDGC-YLALDVFPVLANKGMFPSKTTC-NILL---TSLVRATE-F 234
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ EA V+ GV +V F I+ CK + E+AI+LF +M E G PN T+
Sbjct: 235 QKCCEAFHVVC----KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTY 290
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+I L + R E ++M G Y + L +RI A V ++M
Sbjct: 291 NTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTE 350
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G P+ Y+ L+ ++KA + D V G+ + Y
Sbjct: 351 KGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTY 395
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 7/214 (3%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N + PD ++I G C + +E ++L EM + TV YN + + CR
Sbjct: 596 NGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHL---IGAYCRSG- 651
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
RL S A ++ DM++ G+ N T+ LI + I R E+A L M G PN
Sbjct: 652 --RL-SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVF 708
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ LI + ++ + + ++ M S K Y + + +A + +M
Sbjct: 709 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEM 768
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ G PDS TY + + V +A DE
Sbjct: 769 REKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 15/316 (4%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T ++ L R G+P + + +RM D G D S ++++ LC G+ + A KL+
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRM-LDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLT 465
Query: 224 DTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ ++ PD +I +C GK D A M R G L V ++D V +
Sbjct: 466 SMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVG 525
Query: 283 RKKDP-FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+ +D F L++ L+ M P ++ ++S CK++ + + + ++ + G
Sbjct: 526 KTRDALFILET-----LVKMRMLTTPHSLNVILDMLSKGCKLK---EELAMLGKINKLGL 577
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ T+ L+ L ++ + M++ MK +G Y + LC R+E+A
Sbjct: 578 VPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ M+ G +P+ TY +++ + + ++D+A V G E+ + Y L+
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY---SSLLR 694
Query: 462 KPIAVKKGKKRETLPE 477
+ +KG RET PE
Sbjct: 695 GFVLSQKG-IRETDPE 709
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 153/398 (38%), Gaps = 45/398 (11%)
Query: 89 IFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFK 148
+ SH++P ++ ++ + F W+ +++++ + F+
Sbjct: 63 LVSHMSP--NVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLFR 120
Query: 149 AIHDFLVD--------NKEVLGPKTLASCIDRL-----VRAGRPTQV----------LGF 185
HD +V KE+L L SC D L R P LGF
Sbjct: 121 VAHDVIVALIRECSRCEKEML---KLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGF 177
Query: 186 -----FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVKDTANEIFPDDKICDLL 239
+ RME D GF R +V LC+NGY AE + K D I L
Sbjct: 178 LAYVTYRRMEAD-GFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSL 236
Query: 240 IKGWCVDGKLDEAKRLAREMYR-GGFELGTVAYNCILDCVSKLCRKKDPFRL-DSEAEKV 297
+ G+C L +A ++ M R G +V+Y+ ++ + ++ R ++ F L D EK
Sbjct: 237 LLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK- 295
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
G + T+ VLI LC + A LF M GC PN T+ VLI L +
Sbjct: 296 -------GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCR 348
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
++ E + + +M G Y + C R+ A + M+ P+ T
Sbjct: 349 DGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ LM C + KA L + NG+ Y V
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 10/268 (3%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLI 240
L F+ M R+ + S +++ LCE G A L KD E P + +LI
Sbjct: 250 LKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGL-KDQMGEKGCQPSTRTYTVLI 308
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
K C G +D+A L EM G + Y ++D LCR EA V
Sbjct: 309 KALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLID---GLCRDGKI----EEANGVCRK 361
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M +G+ +V T+N LI+ CK R A +L M + C PN TF L++ L + +
Sbjct: 362 MVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ ++ RM G + Y + LC + A + M + PD T+
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTA 481
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEV 448
++ +C + D A+A +R G+ +
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISL 509
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 121/300 (40%), Gaps = 9/300 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
I L GR + G ++M + G + + ++++ LC+ G A L + A
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMG-EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG 331
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ +LI G C DGK++EA + R+M + G + YN +++ K R F
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAF 391
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L L ME NV TFN L+ LC++ + A+ L RM + G P+ ++
Sbjct: 392 EL-------LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
VLI L + + +++ M S + + C + + A + M
Sbjct: 445 NVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
G + D T L+ C + A + + V+ + P V L K +K+
Sbjct: 505 KGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKE 564
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 10/288 (3%)
Query: 148 KAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
+++ + L + K + T + + R G+ + L + ME + S ++++
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIK 367
Query: 208 KLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
L ENG A + + + + DK + I G CV+G +++A + +E+ G L
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
AY I+DC LC+KK RL+ EA ++ +M +GV N N LI L + R
Sbjct: 428 DVYAYASIIDC---LCKKK---RLE-EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+A MG+ GC P ++ +LI L +A + GE + M G+ K Y
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
L LC +I+ A+ ++ + G D +++L+ C+ ++D A
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 196/434 (45%), Gaps = 39/434 (8%)
Query: 31 RFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEAD-PLPISQRLHLI 89
R S T +N +S+ + K D+ +A S+ +N D L + +R+ I
Sbjct: 52 RLSETRMVNHVSRIVELIRSQECKC----DEDVALSVIKTYGKNSMPDQALDVFKRMREI 107
Query: 90 FSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTD--------ETLSFFTDYF 141
F P + LN EA W+ + F++ + +T +
Sbjct: 108 FG-CEPAIRSYNTLLNAFVEA-------KQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159
Query: 142 GRRKDFKAIHDFL-VDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
++K+F+ FL KE P + + I+ L +AG+ L F+ M + G D
Sbjct: 160 CKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS-ERGVAPD 218
Query: 199 KDSLRLVVEK-LCENGYASYAE---KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKR 254
++++ L E + + E +L++D++ ++P+ K +++I G G++D+ +
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSS--VYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
+ M + E Y+ + + LC D +D +AE V +++ +V T+N
Sbjct: 277 IWERMKQNEREKDLYTYSSL---IHGLC---DAGNVD-KAESVFNELDERKASIDVVTYN 329
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
++ C+ + +++++L +R+ E N ++ +LIK L + ++ E + M +
Sbjct: 330 TMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
GYA K Y F+ LC + +A+ V +++++ G + D Y ++ C R+++A
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 435 NALFDEAVRNGVEV 448
+ L E ++GVE+
Sbjct: 449 SNLVKEMSKHGVEL 462
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L G + LG + +E G D + +++ LC+ A LVK+ +
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESS-GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ + +C+ LI G D +L EA REM + G V+YN IL C LC K F
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN-ILIC--GLC-KAGKF 515
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA + +M NG +++T+++L+ LC+ R+ + A++L+++ + G +
Sbjct: 516 ---GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L ++ + ++ M+ Y + + +A ++ M
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PD +Y+ +M C V A FD+A +G+
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-----EIFPDDKICDLLIKGWCVDGK 248
G+ DK + + + LC NGY + A ++++ + +++ I D L C +
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL----CKKKR 444
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L+EA L +EM + G EL + N + + L R RL EA L +M NG
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNAL---IGGLIRDS---RL-GEASFFLREMGKNGCRP 497
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
V ++N+LI LCK + +A M E G P+ T+ +L+ L + ++ E+
Sbjct: 498 TVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELW 557
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ +G + + LC + +++ AM+V M+ + TY+ LM +
Sbjct: 558 HQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKV 617
Query: 429 NRVDKANALFDEAVRNGVE 447
++A ++ + G++
Sbjct: 618 GDSNRATVIWGYMYKMGLQ 636
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 18/328 (5%)
Query: 135 SFFTDYFGRRKDFKA---IHDFLVDNKEVL-GPKTLASCIDRLVRAGRPTQVLGFFERME 190
+ D F + KD K + D L+++ V KT I L + GR L +ERM+
Sbjct: 223 NILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMK 282
Query: 191 RDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDG 247
++ +R+KD + ++ LC+ G AE + + D + + ++ G+C G
Sbjct: 283 QN---EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K+ E+ L R M + V+YN ++ + + ++D EA + M G
Sbjct: 340 KIKESLELWRIMEHKN-SVNIVSYNILIKGLL------ENGKID-EATMIWRLMPAKGYA 391
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
+ T+ + I LC A+ + + G H + + +I L + R+ E +
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M G + + L R+ +A +M +G P +Y++L+ C
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCK 511
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ +A+A E + NG + K Y +
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSI 539
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 133/326 (40%), Gaps = 57/326 (17%)
Query: 160 VLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY 217
V+ PK+L+ + L P F+ R G+ ++ +L E ++
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNH 61
Query: 218 AEKLVKDT-ANEIFPDDKICDLLIKGW----CVDGKLDEAKRLAREMYRGGFELGTVAYN 272
++V+ + E D+ + +IK + D LD KR+ RE++ G E +YN
Sbjct: 62 VSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRM-REIF--GCEPAIRSYN 118
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+L+ K +++S + E GV N++T+NVLI CK + E A
Sbjct: 119 TLLN---AFVEAKQWVKVES----LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA-------------IG 379
M + G P+ ++ +I L +A ++ + E+ D M G A +
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 380 KKDY---YEFLTRL----------------------CGIERIEQAMSVFEKMKTDGHNPD 414
+KD+ E RL CG R++ + ++E+MK + D
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG--RVDDCLKIWERMKQNEREKD 289
Query: 415 SETYDLLMTKWCAHNRVDKANALFDE 440
TY L+ C VDKA ++F+E
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNE 315
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 123/296 (41%), Gaps = 26/296 (8%)
Query: 170 IDRLVRAGRPTQVLGFFERM--------ERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
ID L +AG + L + M E YG ++V LC+ G AE+L
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG---------ILVNSLCKAGTLERAEEL 317
Query: 222 VKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ A F P+ I LI G+ G++ EA L EM G+ + + ++D
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID---G 374
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+ + +A K +M G NV T+ +I L KI R +A ++ M G
Sbjct: 375 LCKSGNF----EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P+ T++ L+ + R+ E +++D + + + Y + LC +E +
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490
Query: 401 S-VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+FE+ K N D ++ C R+D+A +F V G + Y +
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 152/362 (41%), Gaps = 20/362 (5%)
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFK--- 148
H S V + L G AI F W + A F H T + + K++
Sbjct: 81 HGQVLGSHVAAVLRSLKVTGTAI-SFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCY 139
Query: 149 AIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
AIH+ ++ K + P T + I R R + FE M+R K D + ++V
Sbjct: 140 AIHEEML--KAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKR-CKPDLHTFLILV 196
Query: 207 EKLCENGYASYAEKLVKDTANEIF--PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LC+ G A ++ + F PD + +++ ++ EA+ + +M + GF
Sbjct: 197 DCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGF 256
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLISNLCKI 323
+AYN ++D ++K + EA KVL +M VP V T+ +L+++LCK
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQ-------EALKVLDNMLAKACVPTEV-TYGILVNSLCKA 308
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
E A +LF M G PN + LI ++ R+ E + D M AGY +
Sbjct: 309 GTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH 368
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC EQA FE+M G P+ TY ++ RV A + +
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428
Query: 444 NG 445
+G
Sbjct: 429 HG 430
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 10/271 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L++A R + F +ME+ GF D + +++ L + G+A A K++ + A P
Sbjct: 235 LLKAKRVKEAREVFGQMEK-CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ +L+ C G L+ A+ L R M GF +V Y ++ +K R K
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK------ 347
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA + +M G +V T V+I LCK E A K F M GC PN T+ +
Sbjct: 348 -EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I+ L + RV ++ M + G Y L C + R+++A + +++
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466
Query: 412 NPDSETYDLLMTKWCAHNRVDKA-NALFDEA 441
+P+ + Y L+ C V+ + LF+++
Sbjct: 467 SPNLQLYSSLVKGLCDGGSVENTLDDLFEQS 497
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 12/291 (4%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN--GYAS 216
E L P S I L + GR + F+RM + G K D + +++ LC +
Sbjct: 502 ENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE-GCKPDATTYNILINGLCRSRENRVE 560
Query: 217 YAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A L+ D + PD L G C G++D A ++ E G+ VAY +
Sbjct: 561 RAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL- 619
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ LC + R A + +M G + + +I+ L K ++ EDA K F
Sbjct: 620 --CTGLCYQGQVDR----AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDE 673
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR-LCGIE 394
M G P T+ L+++L A V E + M + G +G Y+ L C
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKAL 733
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+++ A+ +FE M + G+ P + T L + +KA L E G
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 21/250 (8%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDK---------ICDLLIKGWCVDGKLDEAKRL 255
+V+ LC+ G V++T +++F K +C +I G C G+LDEA R+
Sbjct: 476 LVKGLCDGGS-------VENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRI 528
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
+ M G + YN + ++ LCR ++ R++ A +L D+E G + T+
Sbjct: 529 FQRMVSEGCKPDATTYNIL---INGLCRSREN-RVE-RAFALLHDLEMVGYLPDAVTYTP 583
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L LCKI + A+K+ G + + + L L +V + M G
Sbjct: 584 LCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
A Y + L +++E A F++M G P TY L+ C VD+A
Sbjct: 644 GAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703
Query: 436 ALFDEAVRNG 445
F+ + G
Sbjct: 704 HRFEGMLARG 713
>gi|62734288|gb|AAX96397.1| expressed protein [Oryza sativa Japonica Group]
gi|77550330|gb|ABA93127.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 661
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 184/433 (42%), Gaps = 37/433 (8%)
Query: 44 PFSSKPTSNPKTIDDPDQVIARSLSGE-------LLENLEADPLPISQRL--HLIFSHVT 94
P + +P SNP P+ A +LSG+ +L + D L + L H I+S+
Sbjct: 77 PGAPRPASNPNAPKLPEP--ASALSGKRLDLHRRILALVREDDLDEAALLTRHSIYSNCR 134
Query: 95 PTPSLVQSTLNFSPEAGR--AILGFNHWLTQNANFSHTDETLSFFTD-YFGRRKDFKAIH 151
PT + L R +L + ++TQ A+ + T T + Y R+ A+
Sbjct: 135 PTVFTCNAVLAALLRQARYADLLSLHRFVTQ-ASVAPTVATYNLLLQAYCDCRRPDTALE 193
Query: 152 DF---LVDNKEVL-GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
F L D+ VL P T L G+ Q + + M D LV+
Sbjct: 194 HFRLLLKDDSPVLPSPTTYRILARSLAENGKLEQAIELKDGMLERGLVAPDPQVYALVMG 253
Query: 208 KLCENG----YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
G S E+LV+ D + L+KG+ + G EA E+ G
Sbjct: 254 GFVNAGDGDTVVSLYEELVEKLGGGQILDGMVYGNLMKGYFLKGMEKEAMDCYAEVLGEG 313
Query: 264 FEL--GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR----NVETFNVLI 317
++ G V+YN +LD + + + D +L E + PR N+ +FNV++
Sbjct: 314 SKVRFGAVSYNMVLDALGRNGKLDDALQLFDRM------CEEHDPPRRIAVNLGSFNVMV 367
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C+ R +DAI++F +MGE C P+ ++ LI L + VGE +++ M G
Sbjct: 368 DAYCRAERFQDAIEVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEAEQLYKEMGERGVN 427
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ Y + ++R++ ++S F KM G P++ ++ ++ +R+D+A
Sbjct: 428 PDEYTYVLLIESYFKVDRVDDSVSYFNKMFVAGLRPNANAFNKVIGGLVKVDRLDEAQGF 487
Query: 438 FDEAVRNGVEVKP 450
FD+ EVKP
Sbjct: 488 FDKMPEK--EVKP 498
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK- 223
T + +D L + GR M + G ++++ ++V C+ G+ A +++
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD-CV--SK 280
T N + PD ++LI G C +G+++EA +L EM V+YN +++ C+ SK
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ SEA K+L +M GV N T N+++ CK + +DA +M E G
Sbjct: 364 I----------SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ T+ LI +A +GE +D M + L LC +++E+A
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + G+ D +Y L+ + VD+A L+DE
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 187/453 (41%), Gaps = 57/453 (12%)
Query: 75 LEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGR--AILGFNHWLTQNA-NFSHTD 131
L ++ +P+ Q L+ H+TP LV S L+ R ++ F W N F H
Sbjct: 31 LASNNMPL-QALNTYIPHLTP--PLVLSILSSKTLISRPNILISFFKWAQTNLPTFPHNS 87
Query: 132 ETLSFFTDY--FGRRK--DFKAI----------HDFLVDNKEVLGPK--TLASCIDRLVR 175
F RK D K++ HD + + P L + I V+
Sbjct: 88 LPSLLSLLPSLFSHRKFSDAKSLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQ 147
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY--------ASYAEKLVKDTAN 227
+G+P F++M+R LRL L N +S++ ++ N
Sbjct: 148 SGQPHHAFQIFKKMKR----------LRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFN 197
Query: 228 E-----IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ I P+ +++I G+C++ K +A M + V YN ILD LC
Sbjct: 198 DAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD---TLC 254
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+K RL +A +L+DM+ G+ N T+N+L+ CK+ ++A + M +
Sbjct: 255 KKG---RL-GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ +LI L R+ E ++ D M++ Y + +I +A +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR-VDPRYLK 461
E+M G P++ T+++++ +C ++D A+ + +G Y + Y K
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 462 KPIAVKKGKKRETLPEKMARKRRRLKQIRLSFV 494
A G+ T+ E M RK ++ + L+ +
Sbjct: 431 ---AGNMGEAFRTMDE-MGRKNMKMDSVTLNTI 459
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 132/306 (43%), Gaps = 11/306 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
G K+ + + + N + T I+ L GR + + ME + D
Sbjct: 291 MGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLKLLPDVV 349
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
S ++ E S A KL+++ + + + P+ ++++K +C +GK+D+A +M
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFR-LDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
GF V YN +++ K + FR +D K +M+ + V T N ++
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK---NMKMDSV-----TLNTILR 461
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
LC+ ++ E+A KL + G +E ++ LI ++ V ++ D MK
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + LC + EQA+S ++ G PD TY+ ++ +C V+KA
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581
Query: 439 DEAVRN 444
++ V N
Sbjct: 582 NKMVEN 587
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ +AG + + M R K D +L ++ LC A KL+
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRK-NMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
F D+ LI G+ DG +D A +L EM TV YNCI+ + + C
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQ-CG 537
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K + +A L ++ +G+ + T+N ++ C+ E A + +M E P
Sbjct: 538 KTE------QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKP 591
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T +L++ L + + ++ + S G AI Y +T LC R++ A ++
Sbjct: 592 DVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLL 651
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+M+ PD TY+ ++T R+ +A + + G
Sbjct: 652 SEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 9/287 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I+ + + ++ E M + G K + + ++V+ C+ G A +
Sbjct: 353 TLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411
Query: 228 EIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
F PD + LI G+C G + EA R EM R ++ +V N IL LCR+K
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL---RTLCREK- 467
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+L+ EA K+L G + ++ LI K + A+KL+ M E P+
Sbjct: 468 --KLE-EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTV 524
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ +I L Q + + ++ + +G + Y L C +E+A KM
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ PD T ++L+ C ++KA LF+ V G + Y
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTY 631
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 46/280 (16%)
Query: 180 TQVLGFFERMERDYGFK-----RDKD------SLRLVVEKLCENGYASYA-EKLVKDTAN 227
T ++G+F+ D K ++K+ + ++ LC+ G A KL + +
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKK 285
+ PD+ + ++ G+C +G +++A + +M F+ N +L C+ + K
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEK- 611
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
A K+ G + T+N LI++LCK R +DA L M E P+
Sbjct: 612 --------ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDH 663
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAG------YAIGKKD----------------- 382
T+ +I +L + R+ E +E + +M G + K +
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVA 723
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y E++ LC + + AM +F + K G D TY LM
Sbjct: 724 YSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G+ D +L +++ LC G A + F D++ LI G C G+
Sbjct: 158 GYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAV 217
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
RL R++ + V Y I+ C+ K R D L SE M G+ NV T
Sbjct: 218 ARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSE-------MIVKGISPNVFT 270
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI C + ++A L M +P+ TF +LI +L + ++ E + + MK
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
Y + LC +E+A+++ +KMK G PD +Y +L+ C R++
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A F + G + + Y V
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNV 413
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 17/312 (5%)
Query: 140 YFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
+ G K HD +V L + + I+ L +AG V ++E + K D
Sbjct: 175 FCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLE-GHSVKPDV 233
Query: 200 DSLRLVVEKLCEN---GYAS--YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKR 254
++ LC+N G A Y+E +VK + +F + LI G+C+ G L EA
Sbjct: 234 VMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNT----LIYGFCIMGNLKEAFS 289
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFN 314
L EM +N ++D + K ++D EA + +M++ + N+ T+
Sbjct: 290 LLNEMKLKNINPDVYTFNILIDALGK------EGKID-EAISLFEEMKHKNMFPNIVTYT 342
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
LI LCK E AI L +M E G P+ ++ +L+ +L + R+ + +
Sbjct: 343 SLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVK 402
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
GY + + Y + LC M + KM+ G PD+ T+ ++ + DKA
Sbjct: 403 GYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKA 462
Query: 435 NALFDEAVRNGV 446
E + G+
Sbjct: 463 EKFLREMIARGL 474
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
NGV N+ T N+LI+ C + A +F + + G HP+ T LIK L +
Sbjct: 122 NGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKR 181
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
D++ + G+ + + Y + LC + + K++ PD Y ++
Sbjct: 182 ALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIH 241
Query: 424 KWCAHNRVDKANALFDEAVRNGVE 447
C + RV A L+ E + G+
Sbjct: 242 CLCKNKRVGDACDLYSEMIVKGIS 265
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 149/364 (40%), Gaps = 21/364 (5%)
Query: 99 LVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDET----LSFFTD--YFGRRKDFKAIHD 152
LV+ L E I F W + NF H T + D FG +K I +
Sbjct: 64 LVREVLKIDVEINVKI-QFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEM--WKMIQE 120
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+ V+GP L+ + L +A + L F ++ + K + ++ L +
Sbjct: 121 MVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQI-KSRKCKPTASTYNSMILMLMQE 179
Query: 213 GYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
G+ +L + NE FPD +L+ + G+ D A RL EM G
Sbjct: 180 GHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKI 239
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y +L K D +A ++ +M+ G V T+ LI L K R EDA
Sbjct: 240 YTTLLAIYFK--------SGDEKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAY 291
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+F M + GC P+ LI +A R+ + ++ D+M+S A Y + L
Sbjct: 292 SVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKAL 351
Query: 391 CGIER-IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
+ +A S FEKMK +G P S TY +L+ +C NRV+KA L +E G
Sbjct: 352 FESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPC 411
Query: 450 PKEY 453
P Y
Sbjct: 412 PAAY 415
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 16/283 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY-----ASYAEKLVKD 224
I+ +AGR L F++M R + + V++ L E+ AS+ EK+
Sbjct: 313 INIFGKAGRLEDALKLFDQM-RSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKM--- 368
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
AN + P +LI G+C ++++A L EM GF AY +++ + K R
Sbjct: 369 KANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 428
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ A ++ L+++ N + + V+I NL K R +A+ LF M + GC+P+
Sbjct: 429 E-------AANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPD 481
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ L+ L +A + E + M+ G + L L R EQA +F
Sbjct: 482 VYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFM 541
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
KMK PD+ +Y+ ++ ++A L E G E
Sbjct: 542 KMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFE 584
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 6/215 (2%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + + LI + G+L++A +L +M V YN + + L K P
Sbjct: 304 PDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTV---IKALFESKAP--- 357
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
SEA M+ NGV + T+++LI CK R E A+ L M E G P +
Sbjct: 358 ASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 417
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI +L +A R +E+ +K + Y + L R +A+ +F +MK G
Sbjct: 418 LINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIG 477
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
NPD Y+ LM+ +++A + NG
Sbjct: 478 CNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENG 512
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFP 231
LVRAG + ME + G D +S +++ L G A E +K + I P
Sbjct: 492 LVRAGMIEEAFSALRTMEEN-GCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKP 550
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
D + ++ G +EA +L REM GFE + Y+ IL+ V K+ +P
Sbjct: 551 DAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDEP 606
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 8/250 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ +C+ G AE L+ + ++ + + + LI G+C G +DEA + M + G
Sbjct: 351 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKG 410
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F+ N I C ++L R EA++ L M GV + ++ LI CK
Sbjct: 411 FQADVFTCNTIASCFNRLKRY-------DEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKE 463
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
E+A +LF M PN T+ V+I + + +V E ++ MK+ G Y
Sbjct: 464 GNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTY 523
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C + +++AM +F +M G + +S TY ++++ + D+A L+DE R
Sbjct: 524 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKR 583
Query: 444 NGVEVKPKEY 453
G + K Y
Sbjct: 584 KGYTIDNKVY 593
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 137/335 (40%), Gaps = 12/335 (3%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + + + + +DF + L K+ V T I+ V+ G+ V F+ M
Sbjct: 242 TYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEM 301
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGK 248
R+ G + D ++ C G A L + T + P LI G C G+
Sbjct: 302 -RERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGE 360
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+ A+ L EM G + V +N + ++ CRK + EA + ME G
Sbjct: 361 MGAAEILMNEMQSKGVNITQVVFNTL---INGYCRKG----MIDEASMIYDVMEKKGFQA 413
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T N + S +++R ++A + +RM E G + ++ LI + V E +
Sbjct: 414 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLF 473
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M S Y + C ++++A ++ MK +G +PDS TY L+ C
Sbjct: 474 VEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIA 533
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
+ VD+A LF E G++ Y V L K
Sbjct: 534 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 568
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 12/290 (4%)
Query: 168 SCIDRLVRAGRPTQV---LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
SCI LV A + ++ L FF RM D G K SL +VVE LC G ++KL+K+
Sbjct: 172 SCIVFLVAAKKRRRIDLCLEFFRRM-VDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKE 230
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I P+ + +I + +++ + M + G V Y +++ K +
Sbjct: 231 FSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGK 290
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D EK+ +M G+ ++ + LIS C+ + A LF + E G P
Sbjct: 291 MND-------VEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLP 343
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI + + +G + +++ M+S G I + + + C I++A ++
Sbjct: 344 SSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIY 403
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ M+ G D T + + + + R D+A + GV + Y
Sbjct: 404 DVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSY 453
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 23/259 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-------ERDYGFKR-DKDSLR-------LVVEKL 209
T ++ ID +AG+ + FERM + D FK+ D +S R +++
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C++ A KL+ + E P+ + D LI G C GKLDEA+ + EM GF
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
Y+ ++D K+ R+ A KVL M N NV + +I LCK+ ++++
Sbjct: 710 YTYSSLIDRYFKVKRQ-------DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A KL M E GC PN T+ +I ++ E+++RM S G A Y +
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 389 RLCGIERIEQAMSVFEKMK 407
C ++ A ++ E+MK
Sbjct: 823 HCCKNGALDVAHNLLEEMK 841
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 112/267 (41%), Gaps = 32/267 (11%)
Query: 198 DKDSLRLVVEKLCENGYASY-AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
DKDSL + L E Y+ A +V + N + C GK ++A +
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN--------VSSFTRCLCSAGKYEKAFSVI 471
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
REM GF T Y+ +L+ + + + F L E M+ G+ +V T+ ++
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE-------MKRGGLVADVYTYTIM 524
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ + CK E A K F M E GC PN T+ LI + +A +V +E+ + M S G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE----------------TYDL 420
Y + C ++E+A +FE+M PD + TY
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ +C +RV++A L D G E
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCE 671
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 114/295 (38%), Gaps = 15/295 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L A + FE M+R G D + ++V+ C+ G A K +
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--C---- 277
P+ LI + K+ A L M G V Y+ ++D C
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEY-----NGVPRNVETFNVLISNLCKIRRSEDAIKL 332
V K C+ + R+ + +DM + N NV T+ L+ CK R E+A KL
Sbjct: 604 VEKACQIFE--RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M GC PN+ + LI L + ++ E E+ M G+ Y + R
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++R + A V KM + P+ Y ++ C + D+A L G +
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 150/405 (37%), Gaps = 58/405 (14%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV----DNKEVLGPKTLAS 168
A++ F W + + HT + D R D K +FL D+KEV G + L
Sbjct: 147 AVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFG-EFLNV 205
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFK-------------------------------- 196
+ + R G + L R+ +D+ F+
Sbjct: 206 LVRKHCRNGSFSIALEELGRL-KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 197 ---RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
D +LR LC+ G A LV +T N + PD LI G C +EA
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLV-ETENFV-PDTVFYTKLISGLCEASLFEEAM 322
Query: 254 RLAREMYRGGFELGTVAYNCIL-DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
M V Y+ +L C++K + ++VL M G + +
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNK--------KQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL------YQAARVGEGDE 366
FN L+ C A KL +M + G P + +LI S+ + ++
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
M +AG + K + F LC + E+A SV +M G PD+ TY ++ C
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
++++ A LF+E R G+ Y + K +++ +K
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 129/357 (36%), Gaps = 60/357 (16%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMER 191
+ +S D FGR+ FL +E L + I+ L RP+ V+ FF R
Sbjct: 106 DAVSGVDDVFGRKS-----QKFLRQFREKLSESLV---IEVLRLIARPSAVISFFVWAGR 157
Query: 192 DYGFK--------------RDKDS---------------------LRLVVEKLCENGYAS 216
G+K RD D L ++V K C NG S
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217
Query: 217 YA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A E+L + P + LI+ + +LD A + REM + C
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ K+ + ++ L E E N VP V + LIS LC+ E+A+ R
Sbjct: 278 YSLCKVGKWREALTL-VETE--------NFVPDTV-FYTKLISGLCEASLFEEAMDFLNR 327
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M C PN T+ L+ ++G +++ M G K + + C
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH------NRVDKANALFDEAVRNGV 446
A + +KM GH P Y++L+ C + +D A + E + GV
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 123/303 (40%), Gaps = 25/303 (8%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D +AG Q +F M R+ G + + ++ + SYA +L + +E
Sbjct: 525 VDSFCKAGLIEQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAR-----------EMYRGGFELGT-----VAYN 272
P+ LI G C G++++A ++ +MY ++ + V Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+LD K R + EA K+L M G N ++ LI LCK+ + ++A ++
Sbjct: 644 ALLDGFCKSHRVE-------EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M E G T+ LI ++ R +++ +M A Y E + LC
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+ + ++A + + M+ G P+ TY ++ + +++ L + GV
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 453 YRV 455
YRV
Sbjct: 817 YRV 819
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID G+ L ERM G + + R++++ C+NG A L+++
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+P +I+G+ + + E+ L E+ + Y ++D + K R
Sbjct: 840 MKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQR 897
Query: 284 KKDPFRLDSEA---EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ RL E L+D T+N LI +LC + E A +LF M + G
Sbjct: 898 LEMALRLLEEVATFSATLVDYS--------STYNSLIESLCLANKVETAFQLFSEMTKKG 949
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMID 369
P +F LIK L++ +++ E ++D
Sbjct: 950 VIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 7/210 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ + LI +C DG +D+A ++ EM G G + YN + + LCR K
Sbjct: 259 IVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNIL---IGGLCRGKK-- 313
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA K++ + G+ N+ T+N+LI+ C +R+ + A++LF ++ G P T+
Sbjct: 314 --FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTY 371
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + +++ M+ A K Y + + E+A + M+
Sbjct: 372 NTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEK 431
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
G PD TY +L+ C H + +A+ LF
Sbjct: 432 SGLVPDVYTYSVLLHGLCVHGNMKEASKLF 461
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 193/463 (41%), Gaps = 39/463 (8%)
Query: 6 SLLLGRLLLQQPPHR--FISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVI 63
+L+L + +++ PP + + +TY +H ++F+ S + +I
Sbjct: 7 ALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSS-----GMLPQAQSLI 61
Query: 64 ARSLSGELLENLEADPLPISQRLHLIFSHVTPTPS---LVQSTLN---FSPEAGRAILGF 117
R +SG + P S L L +H TP + L + +N S +A+
Sbjct: 62 LRLISGRI---------PSSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFL 112
Query: 118 NHWLTQN----ANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRL 173
+H + + +N + L ++YF K + ++ + +K VL + I
Sbjct: 113 HHMIHEGHVPLSNTFNNLLCLLIRSNYF--DKAWWIFNE--LKSKVVLDAYSFGIMIKGC 168
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANEIFPD 232
AG + +E ++G + +++ C++G A+ L K + P+
Sbjct: 169 CEAGYFVKGFRLLAMLE-EFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPN 227
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+L+ G+ G E ++ M R G AYNC+ +S+ C +
Sbjct: 228 PHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL---ISEYCNDG----MVD 280
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A KV +M G+ V T+N+LI LC+ ++ +A+KL +++ + G PN T+ +LI
Sbjct: 281 KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILI 340
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
++ + +++KS+G + Y + +E + A+ + ++M+
Sbjct: 341 NGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA 400
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
P TY +L+ + N +KA + ++G+ Y V
Sbjct: 401 PSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSV 443
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 125/285 (43%), Gaps = 9/285 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T + ++ + G + +E M+R G + + ++ + C +G A K+
Sbjct: 228 PHTYSVLMNGFFKQGLQREGFQMYENMKRS-GIVPNAYAYNCLISEYCNDGMVDKAFKVF 286
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ + I ++LI G C K EA +L ++ + G V YN +++
Sbjct: 287 AEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILIN---GF 343
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C D ++DS A ++ ++ +G+ + T+N LI+ K+ A+ L M E
Sbjct: 344 C---DVRKMDS-AVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P++ T+ +LI + + + EM M+ +G Y L LC +++A
Sbjct: 400 APSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASK 459
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+F+ + P+S Y+ ++ +C +A L +E V++G+
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGM 504
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 107/281 (38%), Gaps = 30/281 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
I G + F M R+ G + +++ LC A KLV K
Sbjct: 270 ISEYCNDGMVDKAFKVFAEM-REKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ ++LI G+C K+D A RL ++ G V YN ++ SK+
Sbjct: 329 LSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGAL 388
Query: 289 RLDSEAEK-----------VLLD-----------------MEYNGVPRNVETFNVLISNL 320
L E E+ +L+D ME +G+ +V T++VL+ L
Sbjct: 389 DLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGL 448
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C ++A KLF +GE PN + +I + +++ M +G
Sbjct: 449 CVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNV 508
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ + LC E+ ++A + +M G P Y ++
Sbjct: 509 ASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549
>gi|302816300|ref|XP_002989829.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
gi|300142395|gb|EFJ09096.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
Length = 331
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 124/280 (44%), Gaps = 15/280 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKD--SLRLVVEKLCENGYASYAEKLVKDTAN 227
I L+RA R L F +ME++ RD D S +VV LC+ A L+
Sbjct: 62 IRGLIRAKRVDDALDHFAKMEKN----RDTDLESYSIVVSALCDEKRVDKAVDLLYSMNE 117
Query: 228 EIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
E F PD I + +I+ + +L A L +M E G + + + + C K+
Sbjct: 118 ESFLPDVGIYNRIIEAM-SELQLHGAYLLFEQM----IEAGVLPNSATFSFLVRGCFKRG 172
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
E ++L M +G + TFN +I LCK+RR E+A + M GC P+
Sbjct: 173 FL---DEGSELLRQMVESGCVPELATFNAVIEGLCKVRRVENARWVMNEMASQGCSPDAA 229
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T L+++L + ++ E + RM + G Y + +LC R +A F++M
Sbjct: 230 THRFLLEALCKMDKLDEAHRHVQRMIATGCLPDTVTYSFLIKKLCKEGRPMEAHRFFKEM 289
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PDS Y+LL+ CA ++ LF + GV
Sbjct: 290 IGIGREPDSSIYNLLLASHCAASKATACYELFTQMKERGV 329
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 42/241 (17%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+++G+C G +D A R+ +M + GF + +N I+ + + R D LD A+
Sbjct: 26 MVEGYCYVGDMDPATRILAQMEKMGFHIDVGLHNAIIRGLIRAKRVDDA--LDHFAK--- 80
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG--------------------- 337
ME N ++E++++++S LC +R + A+ L Y M
Sbjct: 81 --MEKNR-DTDLESYSIVVSALCDEKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMSEL 137
Query: 338 -------------EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
E G PN TF L++ ++ + EG E++ +M +G +
Sbjct: 138 QLHGAYLLFEQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFN 197
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ LC + R+E A V +M + G +PD+ T+ L+ C +++D+A+ +
Sbjct: 198 AVIEGLCKVRRVENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIAT 257
Query: 445 G 445
G
Sbjct: 258 G 258
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+++ C + ++D+A L M F YN I++ +S+L + E
Sbjct: 94 IVVSALCDEKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMSELQLHGAYLLFEQMIEA- 152
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
GV N TF+ L+ K ++ +L +M E GC P TF +I+ L +
Sbjct: 153 -------GVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFNAVIEGLCK 205
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
RV +++ M S G + + L LC ++++++A ++M G PD+ T
Sbjct: 206 VRRVENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIATGCLPDTVT 265
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
Y L+ K C R +A+ F E + G E
Sbjct: 266 YSFLIKKLCKEGRPMEAHRFFKEMIGIGRE 295
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 8/283 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + G + F ++ R G+K + + ++ C+ + AE L+
Sbjct: 331 THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI G C G A L M + GF YN I+D LC+
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIID---GLCK 447
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K LD EA ++L + +G+ + T+ +L+S C+ + ++ F +M + G P
Sbjct: 448 KGS---LD-EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTP 503
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ LI + + ++ E + + + S G KK Y + C A+ +F
Sbjct: 504 DIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++M G PDS TY L++ C +++D A L+D + G+
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 20/321 (6%)
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
F+VDN T ID + G +V+G+F +M + G + + ++ LC+
Sbjct: 255 FIVDNA------TCTLIIDAFCQKGYVNRVVGYFWKMV-EMGLAPNVINFTALINGLCKQ 307
Query: 213 GYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVA 270
G A +L+++ + P+ LI G C G ++A RL ++ R G++
Sbjct: 308 GSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y +++ C++ R AE +L M+ G+ N T+ LI CK+ A
Sbjct: 368 YTAMIN---GYCKEDKLNR----AEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAY 420
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+L MG+ G PN T+ +I L + + E +++++ G Y ++
Sbjct: 421 ELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVH 480
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C +++ F KM G PD +Y L++ +C ++ ++ LF+EAV G+
Sbjct: 481 CRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTK 540
Query: 451 KEYRVD----PRYLKKPIAVK 467
K Y RY +AVK
Sbjct: 541 KTYTSMICGYCRYGNTSLAVK 561
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 132/340 (38%), Gaps = 13/340 (3%)
Query: 121 LTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAG 177
L N N +E + F K + +V+ + V +TL +D V G
Sbjct: 144 LIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMG 203
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKIC 236
F M + G D S +L+V C G AE+ + F D+ C
Sbjct: 204 LVEIAENMFVEMCQR-GVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATC 262
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
L+I +C G ++ +M G + + +++ + K K F L
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFEL------ 316
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW-GCHPNETTFLVLIKSL 355
L +M G NV T LI LCK +E A +LF ++ G PN T+ +I
Sbjct: 317 -LEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGY 375
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ ++ + ++ RM+ G Y + C + +A + + M +G +P+
Sbjct: 376 CKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNI 435
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY+ ++ C +D+A L ++ +G++ Y +
Sbjct: 436 YTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTI 475
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 9/256 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGW 243
RM+ + G + ++ +++ C+ G A +L+ E F P+ + +I G
Sbjct: 387 LLSRMQ-EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGL 445
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G LDEA RL ++ G + V Y ++ S CR+ D R K+L
Sbjct: 446 CKKGSLDEAYRLLNKVSVHGLQADGVTYTILM---SVHCRQADTNRSLVFFNKML----K 498
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G ++ ++ LIS C+ ++ +++ +LF G P + T+ +I +
Sbjct: 499 VGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSL 558
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++ RM + G A Y ++ LC +++ A ++++ M G +P T L
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618
Query: 424 KWCAHNRVDKANALFD 439
++C + A + D
Sbjct: 619 EYCKKDDSSTAINVLD 634
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 14/284 (4%)
Query: 176 AGRPTQVL----GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF- 230
+ +PT+ + +RM ++ GF D + +++ LC G A + E F
Sbjct: 98 SAKPTESIPHAYQVLDRM-KNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFN 156
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P +LI+ + G +DEA +L EM+ + YN I+ +CR+ R
Sbjct: 157 PTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSII----XMCREGYVDR- 211
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A +V+ + G +V T+N+L+ +L + E +L M GC N T+ V
Sbjct: 212 ---AFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSV 268
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI SL + +V EG ++ MK G Y + LC R++ A+ V + M +DG
Sbjct: 269 LISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDG 328
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
PD Y+ ++ C R D+A ++F++ G Y
Sbjct: 329 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYN 372
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI C DGK++E L ++M + G E Y+ + ++ LC++ R+D E V
Sbjct: 268 VLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPL---IAVLCKEG---RVDLAIE-V 320
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN----ETTFLVLIK 353
L M +G ++ +N +++ LCK +R+++A+ +F ++GE GC PN T F L
Sbjct: 321 LDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGS 380
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN- 412
S ++ +G EM+D + A Y ++ LC +++A+ + M+ +
Sbjct: 381 SGHKVRALGMILEMLDXVDPDVIA-----YNSLISCLCRDGMVDEAIELLVDMEMESSEC 435
Query: 413 -PDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P +Y++++ C RV A + V G
Sbjct: 436 KPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKG 469
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 44/197 (22%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+++ T+ +C L + R + L FE++ + G + S V L +G+ A
Sbjct: 332 DIVNYNTILAC---LCKQKRADEALSIFEKL-GEVGCSPNASSYNTVFSALGSSGHKVRA 387
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
++ + + + PD + LI C DG +DEA L +M
Sbjct: 388 LGMILEMLDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDM------------------- 428
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
+ME + +V ++N+++ LC++ R DA ++ M +
Sbjct: 429 ---------------------EMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVD 467
Query: 339 WGCHPNETTFLVLIKSL 355
GC PNETT+ LI+ +
Sbjct: 468 KGCLPNETTYTFLIEGI 484
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 78/178 (43%), Gaps = 5/178 (2%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A +VL M+ G ++ T+N+LI +LC A++ ++ + +P T+ +LI+
Sbjct: 108 AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIE 167
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF--LTRLCGIERIEQAMSVFEKMKTDGH 411
+ + E +++D M + D + + + +C +++A V + + G+
Sbjct: 168 ATLLQGGIDEAIKLLDEMFEINL---QPDVFPYNSIIXMCREGYVDRAFEVISSISSKGY 224
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
D TY++L+ + + L + V G E Y V L + V++G
Sbjct: 225 ALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEG 282
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 23/259 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-------ERDYGFKR-DKDSLR-------LVVEKL 209
T ++ ID +AG+ + FERM + D FK+ D +S R +++
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C++ A KL+ + E P+ + D LI G C GKLDEA+ + EM GF
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
Y+ ++D K+ R+ A KVL M N NV + +I LCK+ ++++
Sbjct: 710 YTYSSLIDRYFKVKRQ-------DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A KL M E GC PN T+ +I ++ E+++RM S G A Y +
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 389 RLCGIERIEQAMSVFEKMK 407
C ++ A ++ E+MK
Sbjct: 823 HCCKNGALDVAHNLLEEMK 841
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 112/267 (41%), Gaps = 32/267 (11%)
Query: 198 DKDSLRLVVEKLCENGYASY-AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
DKDSL + L E Y+ A +V + N + C GK ++A +
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN--------VSSFTRCLCSAGKYEKAFSVI 471
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
REM GF T Y+ +L+ + + + F L E M+ G+ +V T+ ++
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE-------MKRGGLVADVYTYTIM 524
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ + CK E A K F M E GC PN T+ LI + +A +V +E+ + M S G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE----------------TYDL 420
Y + C ++E+A +FE+M PD + TY
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ +C +RV++A L D G E
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCE 671
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 114/295 (38%), Gaps = 15/295 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L A + FE M+R G D + ++V+ C+ G A K +
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--C---- 277
P+ LI + K+ A L M G V Y+ ++D C
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEY-----NGVPRNVETFNVLISNLCKIRRSEDAIKL 332
V K C+ + R+ + +DM + N NV T+ L+ CK R E+A KL
Sbjct: 604 VEKACQIFE--RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M GC PN+ + LI L + ++ E E+ M G+ Y + R
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++R + A V KM + P+ Y ++ C + D+A L G +
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 150/405 (37%), Gaps = 58/405 (14%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV----DNKEVLGPKTLAS 168
A++ F W + + HT + D R D K +FL D+KEV G + L
Sbjct: 147 AVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFG-EFLNV 205
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFK-------------------------------- 196
+ + R G + L R+ +D+ F+
Sbjct: 206 LVRKHCRNGSFSIALEELGRL-KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 197 ---RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
D +LR LC+ G A LV +T N + PD LI G C +EA
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLV-ETENFV-PDTVFYTKLISGLCEASLFEEAM 322
Query: 254 RLAREMYRGGFELGTVAYNCIL-DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
M V Y+ +L C++K + ++VL M G + +
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNK--------KQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL------YQAARVGEGDE 366
FN L+ C A KL +M + G P + +LI S+ + ++
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
M +AG + K + F LC + E+A SV +M G PD+ TY ++ C
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
++++ A LF+E R G+ Y + K +++ +K
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 129/357 (36%), Gaps = 60/357 (16%)
Query: 132 ETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMER 191
+ +S D FGR+ FL +E L + I+ L RP+ V+ FF R
Sbjct: 106 DAVSGVDDVFGRKS-----QKFLRQFREKLSESLV---IEVLRLIARPSAVISFFVWAGR 157
Query: 192 DYGFK--------------RDKDS---------------------LRLVVEKLCENGYAS 216
G+K RD D L ++V K C NG S
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217
Query: 217 YA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A E+L + P + LI+ + +LD A + REM + C
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ K+ + ++ L E E N VP V + LIS LC+ E+A+ R
Sbjct: 278 YSLCKVGKWREALTL-VETE--------NFVPDTV-FYTKLISGLCEASLFEEAMDFLNR 327
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M C PN T+ L+ ++G +++ M G K + + C
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH------NRVDKANALFDEAVRNGV 446
A + +KM GH P Y++L+ C + +D A + E + GV
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 123/303 (40%), Gaps = 25/303 (8%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D +AG Q +F M R+ G + + ++ + SYA +L + +E
Sbjct: 525 VDSFCKAGLIEQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAR-----------EMYRGGFELGT-----VAYN 272
P+ LI G C G++++A ++ +MY ++ + V Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+LD K R + EA K+L M G N ++ LI LCK+ + ++A ++
Sbjct: 644 ALLDGFCKSHRVE-------EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M E G T+ LI ++ R +++ +M A Y E + LC
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+ + ++A + + M+ G P+ TY ++ + +++ L + GV
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 453 YRV 455
YRV
Sbjct: 817 YRV 819
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID G+ L ERM G + + R++++ C+NG A L+++
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+P +I+G+ + + E+ L E+ + Y ++D + K R
Sbjct: 840 MKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQR 897
Query: 284 KKDPFRLDSEA---EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ RL E L+D T+N LI +LC + E A +LF M + G
Sbjct: 898 LEMALRLLEEVATFSATLVDYS--------STYNSLIESLCLANKVETAFQLFSEMTKKG 949
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMID 369
P +F LIK L++ +++ E ++D
Sbjct: 950 VIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 9/273 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TANEIFPDDK 234
GR L M G ++ + V+ C+ G A K+ + T E+ P+
Sbjct: 159 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 218
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ + LI G+C GKLD A M G + YN ++ + R + + L E
Sbjct: 219 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE- 277
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
M G+ +V T+N+LI+ CK + A+++F M G T+ LI +
Sbjct: 278 ------MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 331
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + +V E D++ D G Y + I++A + +M+ PD
Sbjct: 332 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 391
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY+ LM C RVD+A L DE G++
Sbjct: 392 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 424
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 12/248 (4%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+ +++ LC G + A +L++ P+ + +I G+C G++ A + REM
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR---PNAVTYNTVIAGFCSRGRVQAALDIMREMR 172
Query: 261 -RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLIS 318
RGG Y + +S C+ R+D EA KV +M G V +N LI
Sbjct: 173 ERGGIAPNQYTYGTV---ISGWCKVG---RVD-EAVKVFDEMLTKGEVKPEAVMYNALIG 225
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + + A+ RM E G T+ +L+ +L+ R E E+++ M G A
Sbjct: 226 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 285
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A+ +FE M G TY L+ +V + + LF
Sbjct: 286 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 345
Query: 439 DEAVRNGV 446
DEAVR G+
Sbjct: 346 DEAVRRGI 353
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 17/275 (6%)
Query: 177 GRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
G+ L + +RM ER G + L+V L +G + A +LV++ + + PD
Sbjct: 231 GKLDTALLYRDRMVER--GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 288
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
++LI G C +G + +A + M R G V Y ++ +SK + ++ +L EA
Sbjct: 289 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 348
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+ G+ ++ +N LI++ + A ++ M + P++ T+ L++
Sbjct: 349 VR-------RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 401
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEKMKTDGH 411
L RV E ++ID M G + D + T + G ++ A+ + +M G
Sbjct: 402 LCLLGRVDEARKLIDEMTERGI---QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 458
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
NP TY+ L+ C + + D A + E V NG+
Sbjct: 459 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 493
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 18/240 (7%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++++ C GK A L R+M R V YN + ++ C + R+ + A
Sbjct: 118 NIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTV---IAGFCSRG---RVQA-ALD 166
Query: 297 VLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKS 354
++ +M E G+ N T+ +IS CK+ R ++A+K+F M G P + LI
Sbjct: 167 IMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 226
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
++ DRM G A+ Y + L R +A + E+M G PD
Sbjct: 227 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPD 286
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
TY++L+ C V KA +F+ R GV Y L KKG+ +ET
Sbjct: 287 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS-----KKGQVQET 341
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P TFN+++ +LC + A++L +M PN T+ +I RV
Sbjct: 110 LPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAAL 165
Query: 366 EMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMT 423
+++ M+ G A + Y ++ C + R+++A+ VF++M T G P++ Y+ L+
Sbjct: 166 DIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 225
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++D A D V GV + Y +
Sbjct: 226 GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 257
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 24/257 (9%)
Query: 150 IHDFLVDNK--------EVLGPKTLAS-------CIDRLVRAGRPTQVLGFFERMERDYG 194
+H +D + E +G K LA I+ + G + L FE M R G
Sbjct: 259 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR-RG 317
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAK 253
+ + ++ L + G +KL + I PD + + LI G +D A
Sbjct: 318 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 377
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ EM + V YN ++ + L R EA K++ +M G+ ++ T+
Sbjct: 378 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV-------DEARKLIDEMTERGIQPDLVTY 430
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LIS +DA+++ M G +P T+ LI+ L + + + + M+ M
Sbjct: 431 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 490
Query: 374 AGYAIGKKDYYEFLTRL 390
G Y + L
Sbjct: 491 NGITPDDSTYISLIEGL 507
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 135/295 (45%), Gaps = 15/295 (5%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
++ ++ V+ S + +AGR + F++ + R+ + ++++ L
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWD--SAGFAGLRNLRTYNIMIKGL 378
Query: 210 CENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
++G A + L KD A PD LI G C +G ++A + E G +
Sbjct: 379 FDSGMVDEAIELWDLLEKDVA--CIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
L +Y+ +++ + + R D A KV M+ +G N +N LIS C++ R
Sbjct: 437 LDVFSYSSMINGLCNVGRLVD-------AVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+ DA++++ +M + GC P T+ LI L +A + E + M G+ Y
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ L ++I+ A+S+++++ G D +++L+ C+ +VD+A +F +
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSD 604
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 17/284 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-----EKLVKD 224
I L +G + + ++ +E+D D + ++ LC+NG+A+ A E V
Sbjct: 375 IKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSG 434
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
++F +I G C G+L +A ++ +M + G + + YN ++ ++ R
Sbjct: 435 KQLDVFSYSS----MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT 490
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D R+ S+ M NG V T+N LI LCK + ++A + M E G P+
Sbjct: 491 SDAVRIYSK-------MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
TT+ LI+ L+ ++ + + ++ G + + + LC ++++A+ VF
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603
Query: 405 KMKTDGHN-PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
MK + P+ TY+ LM +DKA L+ +G+E
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLE 647
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 38/312 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L + GR +V +ERM + + D + +++ LC +G A ++ +
Sbjct: 271 LDGLCKFGRFKEVGEVWERMVAN-NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAK--------------RLAREMYRGGFELGTVA---- 270
+ D + + L+KG+C G++ EA R M +G F+ G V
Sbjct: 330 LVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE 389
Query: 271 --------YNCILDCVS------KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
CI D V+ LC+ ++A + + +G +V +++ +
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNG----FANKAFTIFEEARVSGKQLDVFSYSSM 445
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LC + R DA+K++ +M + GC PN + LI Q R + + +M G
Sbjct: 446 INGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGC 505
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + LC E+ ++A SV +M +G PD TY L+ + ++D A +
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALS 565
Query: 437 LFDEAVRNGVEV 448
++ + + G++V
Sbjct: 566 IWKQILYKGLKV 577
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 132/310 (42%), Gaps = 15/310 (4%)
Query: 120 WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTL-----ASCIDRLV 174
W + + +T++F T G ++ A F + + + K L +S I+ L
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDD 233
GR + +E+M++D G K + ++ C+ S A ++ A N P
Sbjct: 451 NVGRLVDAVKVYEKMDKD-GCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTV 509
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ LI G C K EA +AREM GF Y + + L K ++D +
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSL---IRGLFSDK---KID-D 562
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW-GCHPNETTFLVLI 352
A + + Y G+ +V N+LI LC + ++A+ +F M E C PN T+ L+
Sbjct: 563 ALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLM 622
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
LY+ + + + + G Y + LC +RI + + + +++ + G
Sbjct: 623 DGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGII 682
Query: 413 PDSETYDLLM 422
P T+++L+
Sbjct: 683 PTVITWNILV 692
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 14/297 (4%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLR--- 203
F+A+ L N G ++ + +D VRA R + FF + +R +L+
Sbjct: 106 FRALPSILGCNP---GIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYN 162
Query: 204 LVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+V+ LC G A L ++ PD L+ G +LD A L EM R
Sbjct: 163 IVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRS 222
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
+ V YN +L K + R+ +K++ D G N+ T+NV++ LCK
Sbjct: 223 RVQPDVVCYNALLGGCFKAGEFEKVMRV---WDKLVKD---PGARPNLATYNVMLDGLCK 276
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
R ++ +++ RM P+ T+ +LI L ++ V + + G I
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + C R+++A ++ G + TY++++ VD+A L+D
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWD 392
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T++ L+ L K R + A+ L M P+ + L+ ++A + + D++
Sbjct: 195 TYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKL 254
Query: 372 -KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
K G Y L LC R ++ V+E+M + PD TY +L+ C
Sbjct: 255 VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGD 314
Query: 431 VDKANALFDEAVRNGVEVKPKEY 453
VD A ++ E ++ G+ + Y
Sbjct: 315 VDGAARVYSEIIKTGLVIDAAMY 337
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY----AIGKKDYYEFLTRLCGIER 395
GC+P + L+ + +A R + D + + A + Y L LC
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+++A+++F+ ++ PD TY LM +R+D A L DE R+ V+
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQ 225
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 153/355 (43%), Gaps = 14/355 (3%)
Query: 95 PTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSF--FTDYFGRRKDFKAIHD 152
P+P + S LN ++ + L L + + F Y RR D + +
Sbjct: 235 PSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFE 294
Query: 153 FL--VDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+ + N + P T ++ +D L R GR + FE M D + +++
Sbjct: 295 VVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLING 354
Query: 209 LCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
C G A A +++ N P+ L+ G C GKL +AK + EM G +
Sbjct: 355 FCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPD 414
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ Y +++ S+ ++D EA ++L +M+ N + TFNV++ LC+ R +
Sbjct: 415 AITYTSLINFFSR------NGQID-EAIELLTEMKENDCQADTVTFNVILGGLCREGRFD 467
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A+ + ++ + G + N+ ++ +++ SL Q + + ++++ M S G+ E L
Sbjct: 468 EALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELL 527
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
RLC A + + G P ++++LL+ C ++ L DE V
Sbjct: 528 VRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRKLLYVFELLDELV 582
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 184/443 (41%), Gaps = 30/443 (6%)
Query: 18 PHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENL-- 75
P+R P ++ SP LNF +KP K P+ + + ++ ++ ++ NL
Sbjct: 88 PYRV--PSASSLPWISP---LNF-TKPLEPKLDPPPEIVVAETRKKSKYITHDVAINLIK 141
Query: 76 -EADPLPISQRLHLI-----FSHVTPT-PSLVQSTLNFSPEAGRAILGFNHWLTQNANFS 128
E DP + +++ F+H T +++Q F + +A+ H +T A
Sbjct: 142 REKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQF--KKFQAVDRVLHQMTYEACKF 199
Query: 129 HTDETLSFFTDYFG---RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGF 185
H ++ Y K F A +E PK ++SC++ LV + + V
Sbjct: 200 HEGVFINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKL 259
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGW 243
+R +K + ++V+ C G A ++VK+ N +P+ L+ G
Sbjct: 260 LLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGL 319
Query: 244 CVDGKLDEAKRLAREMY-RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
C +G+L EA L EM + + YN + ++ CR+ R A V+ M+
Sbjct: 320 CRNGRLKEAFELFEEMVSKDQIVPDPLTYNVL---INGFCREGKADR----ARNVIEFMK 372
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
NG NV ++ L+ LCK + +DA + M G P+ T+ LI + ++
Sbjct: 373 NNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQID 432
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
E E++ MK + L LC R ++A+ + EK+ G + +Y +++
Sbjct: 433 EAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVL 492
Query: 423 TKWCAHNRVDKANALFDEAVRNG 445
+ + KAN L + G
Sbjct: 493 NSLTQNCELRKANKLLGLMLSRG 515
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 9/268 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L R GR G FE+M G K + ++++ C+ G A +L ++
Sbjct: 188 TYGALIQGLCRVGRIEDARGVFEKM-CGRGMKPNAVVFTILIDAHCKKGDAETMLELHRE 246
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD + ++ G C L A + EM G TV Y ++D C+
Sbjct: 247 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLID---GYCK 303
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+++ LD E + +M GV + T+ LIS L K RS DA ++ M E G P
Sbjct: 304 EEE---LDMAME-IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEP 359
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TT+ ++I + + V G ++ M++ G G Y + C + +++ A +
Sbjct: 360 DNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLL 419
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRV 431
M G +PD TY++L+ C H +V
Sbjct: 420 NAMINIGVSPDDITYNILLDGHCKHGKV 447
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 13/226 (5%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ K+ ++L++ G+L A+ + EM G V++N + +S +CR D L
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTM---ISGMCRAGD---L 167
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D AE + M GV +V T+ LI LC++ R EDA +F +M G PN F +
Sbjct: 168 DG-AETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 226
Query: 351 LIKSLYQAARVGEGDEMID---RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
LI + + G+ + M++ M+ G Y + LC ++ A + +M+
Sbjct: 227 LIDA---HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ G PD+ TY L+ +C +D A + V GV + Y
Sbjct: 284 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 329
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 15/277 (5%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
LVR G F+ M+ G +R S ++ +C G AE L + + + P
Sbjct: 126 LVRLGELASAQNVFDEMQ-SRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTP 184
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D LI+G C G++++A+ + +M G + V + ++D C+K D
Sbjct: 185 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILID---AHCKKGD----- 236
Query: 292 SEAEKVL---LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
AE +L +M GV + T+N +++ LC+ R + A + M G P+ T+
Sbjct: 237 --AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTY 294
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + E+ M + G + + Y ++ L R A V +M
Sbjct: 295 TTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 354
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G PD+ TY +++ +C V L E G
Sbjct: 355 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 391
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 7/209 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C G LD A+ L R M G Y ++ + ++ R +D A V
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIED-------ARGVF 209
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G+ N F +LI CK +E ++L M E G P+ T+ ++ L +A
Sbjct: 210 EKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 269
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ ++ M+SAG Y + C E ++ AM + + M +G D TY
Sbjct: 270 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 329
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
L++ R A + E + G+E
Sbjct: 330 TALISGLSKAGRSADAERVLGEMMEAGLE 358
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA L + G+P + FNVL+ +L ++ A +F M G +F +I
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ +A + + + RM AG Y + LC + RIE A VFEKM G
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
P++ + +L+ C + L E GV
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGV 252
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L RA G M R G + D + +++ C+ A ++ ++
Sbjct: 258 TYNAIVNGLCRARDLKSASGIVVEM-RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQN 316
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E D++ LI G G+ +A+R+ EM G E Y ++D CR
Sbjct: 317 MVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVID---AFCR 373
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K D ++L +M+ G V T+NV+++ CK+ + ++A L M G P
Sbjct: 374 KGDV----KTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 429
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
++ T+ +L+ + +V + I+ +KSA
Sbjct: 430 DDITYNILLDGHCKHGKVTD----IEELKSA 456
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A + ++ + G P F VL++ L + + + D M+S G + +
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ +C ++ A ++ +M G PD TY L+ C R++ A +F++ G++
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLD 250
D G+ S +++ LC G A N + P+ L+ G+ G LD
Sbjct: 267 DEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLD 326
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
A + EM G + V Y ++D LC+K + +S +K+L+D P N
Sbjct: 327 GAMLIWNEMKSSGCKPNVVVYTNMID---VLCKKMMFDQAESLIDKMLMD----NCPPNT 379
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
TFN LI LC R A+ +F+ M GCHPN+ T+ L+ L++ + M+
Sbjct: 380 VTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIE 439
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M + G+ + Y + LC + + AM + +M G PD+ T++ ++ +C +
Sbjct: 440 MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGK 499
Query: 431 VDKANALFDE 440
V A L +
Sbjct: 500 VSIAACLLGQ 509
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 129/291 (44%), Gaps = 22/291 (7%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
G + +D L+R V+ ++ M R G + + L++ LC+N A K+
Sbjct: 68 GVRVYNHLLDALLRENMVGAVVPVYDNM-RKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 222 VKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----AYNCILD 276
+ + + + PD+ ++ G C G+++EA+ GF TV +YN +
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR---------GFLAETVPVQASYNAV-- 175
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
V LC + FR+ E V+ +M G+ NV T+ ++ CK R A + RM
Sbjct: 176 -VHALCGE---FRM-WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 230
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
GC PN TF L+K ++ +V + M M G+A Y + LC I +
Sbjct: 231 VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 290
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ A+ F MK + P++ TY L+ + +D A +++E +G +
Sbjct: 291 KGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCK 341
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI---LDCVSKLCRKKDPFRLDSEAE 295
L+KG+ DGK+ +A + M G+ T++YN + L C+ L D F
Sbjct: 245 LVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN------ 298
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
M+ N + N T++ L+ + A+ ++ M GC PN + +I L
Sbjct: 299 ----SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 354
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + + +ID+M + + RLC R+ +A++VF M+ +G +P+
Sbjct: 355 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 414
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY+ L+ A A+ E + NG E+ Y
Sbjct: 415 RTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 452
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 29/185 (15%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ ++ +LC+ G A + N P+D+ + L+ G +G +A + EM
Sbjct: 381 TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEM 440
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKK----------------DPFRLD------------ 291
GFEL V YN +++C+ ++C +K D F +
Sbjct: 441 LNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKV 500
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A +L M PRNV + +LIS LC + +A+ +M G PNE T+ VL
Sbjct: 501 SIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVL 560
Query: 352 IKSLY 356
+++++
Sbjct: 561 VRAIF 565
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 118/281 (41%), Gaps = 12/281 (4%)
Query: 146 DFKAIHDFLVDNK-EVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
D K DF K L P T ++ +D AG + + M + G K +
Sbjct: 289 DLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM-KSSGCKPNVVVY 347
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYR 261
+++ LC+ AE L+ + P + + + LI C G++ A + M R
Sbjct: 348 TNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR 407
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G YN +L + + KD F + +++M NG ++ T+N +I+ LC
Sbjct: 408 NGCHPNDRTYNELLHGLFREGNHKDAFAM-------VIEMLNNGFELSLVTYNTVINCLC 460
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
++ + A+ L RM G P+ TF +I + + +V ++ +M +
Sbjct: 461 QMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVV 520
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
Y ++ LC ++ AM KM +G P+ T+++L+
Sbjct: 521 AYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIK 353
+ L +M GV + I + ++ A+K FYR + GC P + L+
Sbjct: 18 QYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLD 77
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+L + VG + D M+ AG Y + LC +R++ A + ++M G +P
Sbjct: 78 ALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHP 137
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAV 442
D ++ +++ C RV++A E V
Sbjct: 138 DEVSHGTIVSGMCKLGRVEEARGFLAETV 166
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 135/295 (45%), Gaps = 15/295 (5%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
++ ++ V+ S + +AGR + F++ + R+ + ++++ L
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWD--SAGFAGLRNLRTYNIMIKGL 378
Query: 210 CENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
++G A + L KD A PD LI G C +G ++A + E G +
Sbjct: 379 FDSGMVDEAIELWDLLEKDVA--CIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
L +Y+ +++ + + R D A KV M+ +G N +N LIS C++ R
Sbjct: 437 LDVFSYSSMINGLCNVGRLVD-------AVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+ DA++++ +M + GC P T+ LI L +A + E + M G+ Y
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ L ++I+ A+S+++++ G D +++L+ C+ +VD+A +F +
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSD 604
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 17/284 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-----EKLVKD 224
I L +G + + ++ +E+D D + ++ LC+NG+A+ A E V
Sbjct: 375 IKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSG 434
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
++F +I G C G+L +A ++ +M + G + + YN ++ ++ R
Sbjct: 435 KQLDVFSYSS----MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT 490
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D R+ S+ M NG V T+N LI LCK + ++A + M E G P+
Sbjct: 491 SDAVRIYSK-------MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
TT+ LI+ L+ ++ + + ++ G + + + LC ++++A+ VF
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603
Query: 405 KMKTDGHN-PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
MK + P+ TY+ LM +DKA L+ +G+E
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLE 647
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 38/312 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L + GR +V +ERM + + D + +++ LC +G A ++ +
Sbjct: 271 LDGLCKFGRFKEVGEVWERMVAN-NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAK--------------RLAREMYRGGFELGTVA---- 270
+ D + + L+KG+C G++ EA R M +G F+ G V
Sbjct: 330 LVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE 389
Query: 271 --------YNCILDCVS------KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
CI D V+ LC+ ++A + + +G +V +++ +
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNG----FANKAFTIFEEARVSGKQLDVFSYSSM 445
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LC + R DA+K++ +M + GC PN + LI Q R + + +M G
Sbjct: 446 INGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGC 505
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + LC E+ ++A SV +M +G PD TY L+ + ++D A +
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALS 565
Query: 437 LFDEAVRNGVEV 448
++ + + G++V
Sbjct: 566 IWKQILYKGLKV 577
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 132/310 (42%), Gaps = 15/310 (4%)
Query: 120 WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTL-----ASCIDRLV 174
W + + +T++F T G ++ A F + + + K L +S I+ L
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDD 233
GR + +E+M++D G K + ++ C+ S A ++ A N P
Sbjct: 451 NVGRLVDAVKVYEKMDKD-GCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTV 509
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ LI G C K EA +AREM GF Y + + L K ++D +
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSL---IRGLFSDK---KID-D 562
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW-GCHPNETTFLVLI 352
A + + Y G+ +V N+LI LC + ++A+ +F M E C PN T+ L+
Sbjct: 563 ALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLM 622
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
LY+ + + + + G Y + LC +RI + + + +++ + G
Sbjct: 623 DGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGII 682
Query: 413 PDSETYDLLM 422
P T+++L+
Sbjct: 683 PTVITWNILV 692
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 153/391 (39%), Gaps = 30/391 (7%)
Query: 58 DPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGF 117
+PD A + L+ A P P HL+ T +PS + LN P
Sbjct: 23 EPDATAALAHLELLVSTRPAFPPPQPLLFHLLRRLATSSPSHLPCLLNLLPR-------- 74
Query: 118 NHWLTQNANFSHTDE--TLSFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDR 172
L FS + LS F+ F+A+ L N G ++ + +D
Sbjct: 75 ---LRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNP---GIRSHNALLDA 128
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLR---LVVEKLCENGYASYAEKLVKDTAN-E 228
VRA R + FF + +R +L+ +V+ LC G A L +
Sbjct: 129 FVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQ 188
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD L+ G +LD A L EM R G + V YN +L K +
Sbjct: 189 VAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVM 248
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R+ +K++ D G N+ T+NV++ LCK R ++ +++ RM P+ T+
Sbjct: 249 RV---WDKLVKD---PGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITY 302
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L ++ V + + G I Y + C R+++A ++
Sbjct: 303 GILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGF 362
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
G + TY++++ VD+A L+D
Sbjct: 363 AGLR-NLRTYNIMIKGLFDSGMVDEAIELWD 392
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T++ L+ L K R + A+ L M G P+ + L+ ++A + + D++
Sbjct: 195 TYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKL 254
Query: 372 -KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
K G Y L LC R ++ V+E+M + PD TY +L+ C
Sbjct: 255 VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGD 314
Query: 431 VDKANALFDEAVRNGVEVKPKEY 453
VD A ++ E ++ G+ + Y
Sbjct: 315 VDGAARVYSEIIKTGLVIDAAMY 337
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY----AIGKKDYYEFLTRLCGIER 395
GC+P + L+ + +A R + D + + A + Y L LC
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+++A+++F+ ++ PD TY LM +R+D A L DE R+GV+
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQ 225
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + D S +++ L G EKL+ +E P+ +LI C DGK++EA
Sbjct: 293 GSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L + M G +Y+ + ++ CR+ RLD E L M +G ++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPL---IAAFCREG---RLDVAIE-FLETMISDGCLPDIVN 405
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +++ LCK +++ A+++F ++GE GC PN +++ + +L+ + MI M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S G + Y ++ LC +++A + M++ +P TY++++ +C +R++
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A + + V NG Y V
Sbjct: 526 DAINVLESMVGNGCRPNETTYTV 548
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 12/296 (4%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+V L + ++ R T+VL +RM R F D + +++ LC G A
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVL---DRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 219 EKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
K++ ++ P +LI+ ++G +DEA +L EM G + YN I
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI--- 269
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ +C++ + A +++ ++E G +V ++N+L+ L + E+ KL +M
Sbjct: 270 IRGMCKEG----MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
C PN T+ +LI +L + ++ E ++ MK G Y + C R++
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
A+ E M +DG PD Y+ ++ C + + D+A +F + G Y
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 34/246 (13%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC-RKKDPFR 289
PD + LI G+C ++D+A R+ M F TV YN + + LC R K
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM---IGSLCSRGKLDLA 212
Query: 290 LD------------------------------SEAEKVLLDMEYNGVPRNVETFNVLISN 319
L EA K++ +M G+ ++ T+N +I
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+CK + A ++ + G P+ ++ +L+++L + EG++++ +M S
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y +T LC +IE+AM++ + MK G PD+ +YD L+ +C R+D A +
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 440 EAVRNG 445
+ +G
Sbjct: 393 TMISDG 398
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I R GR + F E M D G D + V+ LC+NG A D A EI
Sbjct: 375 IAAFCREGRLDVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGKA--------DQALEI 425
Query: 230 F---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
F P+ + + G A + EM G + + YN ++ C
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC--- 482
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LCR+ + EA ++L+DM +V T+N+++ CK R EDAI + M G
Sbjct: 483 LCREG----MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
C PNETT+ VLI+ + A E E+ + +
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G E+ L M R G YN + +KL + R +A +V+ +E
Sbjct: 100 CRSGNYIESLHLLETMVRKG-------YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G P +V +N LI+ CK+ R +DA ++ RM P+ T+ ++I SL ++
Sbjct: 153 FGQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++++++ S Y + +++A+ + ++M + G PD TY+ ++
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKE 452
C VD+A E VRN +E+K E
Sbjct: 272 GMCKEGMVDRAF----EMVRN-LELKGSE 295
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 9/282 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMER-DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
++ L +AGR L + M R D + D +L VV+ LC++G A V+ +
Sbjct: 179 VNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSS 238
Query: 229 IF---PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ P+ + LI +C G + A L +M G V N I+ + + R
Sbjct: 239 VHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTG 298
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
E V + + N V T++ L+ L A++LF+ G P+
Sbjct: 299 AALEFFREKRTVWPEGKGNAV-----TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDA 353
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ +I L QA R+ + M MK AG+ + K Y + C +R+ +A + ++
Sbjct: 354 IMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQE 413
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
MK G PD TY+ L++ C + L + + +G +
Sbjct: 414 MKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ 455
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 14/314 (4%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEVLG-PK---TLASCIDRLVRAGRPTQVLGFFER 188
T + D F R + ++ LV+ E G P+ TL + + L RAGR L FF
Sbjct: 248 TYNCLIDAFCRVGNISMAYE-LVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306
Query: 189 MERDY-GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVD 246
+ K + + +V L A +L + +E PD + +I G
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+L++A +A M GF+L T AYN + ++ CRKK RL EA ++L +M+ G+
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNIL---IAGFCRKK---RLH-EAYELLQEMKEVGI 419
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T+N L+S CK +L +M + GC P+ TF L+ + ++ E
Sbjct: 420 RPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALR 479
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ M +G Y + LC ++ A+ +F++MK + T++ L+
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLR 539
Query: 427 AHNRVDKANALFDE 440
N +KA L D+
Sbjct: 540 DKNMPEKAFELMDQ 553
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 110/275 (40%), Gaps = 13/275 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFE-RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
TL + +D L ++GR + L F E RM +G + + +++ C G S A +LV+
Sbjct: 211 TLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVE 270
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELG---TVAYNCILDCVS 279
NE P + + + ++ G C G+ A RE R + G V Y+ ++ +
Sbjct: 271 KMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE-KRTVWPEGKGNAVTYSTLVGALL 329
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
L E M P + F +IS L + R EDA + M E
Sbjct: 330 HTNNVGMAMELFHE------KMSEGHSPDAIMYFT-MISGLTQAGRLEDACSMASSMKEA 382
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G + + +LI + R+ E E++ MK G Y L+ C
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAV 442
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ KM DG P T+ L+ +C ++D+A
Sbjct: 443 DELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEA 477
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 11/230 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL--GTVAYNCILDCVSKLCRKKDPF 288
PD +L+ G C G++ +A R+ M R ++ V N ++D + K R ++
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +G P N T+N LI C++ A +L +M G N T
Sbjct: 230 AFVEQRMS-----SVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTL 284
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD---YYEFLTRLCGIERIEQAMSVFEK 405
++ L +A R G E R K + GK + Y + L + AM +F +
Sbjct: 285 NTIVGGLCRAGRTGAALEFF-REKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHE 343
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++GH+PD+ Y +++ R++ A ++ G ++ K Y +
Sbjct: 344 KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNI 393
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 28/308 (9%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFT-----DYFGRRKDFKAI 150
T S + L + G A+ F+ +++ H+ + + +FT GR +D ++
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEG----HSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ + L K I R R + + M ++ G + D + ++ C
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLSGSC 434
Query: 211 ENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ G +A+ E L K + P L+ G+C GK+DEA R+ R M G V
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
YN ++D LC++ D +D E + +M+ VP NV TFN L+ L E A
Sbjct: 495 IYNTLIDF---LCKRGD---VDLAIE-LFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK-------D 382
+L +M E C P+ T VL++ L +GE D + M+ + K+
Sbjct: 548 FELMDQMREERCFPDYVTVDVLMEWL---PVIGETDRLKRFMQQGEHTASKRIVSDRTSA 604
Query: 383 YYEFLTRL 390
Y+ F T L
Sbjct: 605 YFHFATGL 612
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 9/275 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ L + G G F +M + G + D + +++ LC++ + A +
Sbjct: 229 TYTTIINGLCKIGETVAAAGLFRKMG-EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSY 287
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A I P+ + LI+G C + EA + EM V ++ +++ C+
Sbjct: 288 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI---FCK 344
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + F EA VL M GV NV T++ L++ +A KLF M GC P
Sbjct: 345 EGNVF----EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKP 400
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ +LI +A R+GE ++ + M G Y + LC + R+ +A +F
Sbjct: 401 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 460
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ M T+G+ PD TY +L+ +C + KA LF
Sbjct: 461 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLF 495
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 143/348 (41%), Gaps = 37/348 (10%)
Query: 125 ANFSHTDETLSFFTDYFGRR---------KDFKAI------HDFLVD-NKEV----LGPK 164
++F + D+ L++F R+ K AI HD ++ +K++ L P
Sbjct: 97 SSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPD 156
Query: 165 T-----LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
T L +C +L R VL ++ G + + ++ LC+ G A
Sbjct: 157 TYTLHMLINCFFQLQRVDLGFSVLAKIIKL----GLQLTIVTFNTLINGLCKVGKFGQAV 212
Query: 220 KLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+L D + PD +I G C G+ A L R+M G + V Y+ I+D
Sbjct: 213 ELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIID-- 270
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC+ R +EA + M+ G+ N+ T+N LI LC R +A + M
Sbjct: 271 -SLCKD----RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS 325
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
PN TF +LI + V E ++ M G Y + + +
Sbjct: 326 LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVE 385
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
A +F+ M T G PD +Y++L+ +C R+ +A LF+E + G+
Sbjct: 386 ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 433
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +LI + ++D + ++ + G +L V +N +++ + K+ +
Sbjct: 155 PDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKF------ 208
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A ++ DM G +V T+ +I+ LCKI + A LF +MGE GC P+ T+
Sbjct: 209 -GQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYST 267
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I SL + RV E ++ MK+ G + Y + LC R +A ++ +M +
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 327
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
P+ T+ LL+ +C V +A + GVE
Sbjct: 328 IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 118/282 (41%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ L + G+ Q + F+ M G++ D + ++ LC+ G A L +
Sbjct: 194 TFNTLINGLCKVGKFGQAVELFDDMVAR-GYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD +I C D +++EA + M G YN ++ + R
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA +L +M + N+ TF++LI+ CK +A + M E G P
Sbjct: 313 WR-------EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEP 365
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T+ L+ A V E ++ D M + G Y + C +RI +A +F
Sbjct: 366 NVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLF 425
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+M G PD +Y+ L+ C R+ +A+ LF + NG
Sbjct: 426 NEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L + R + L F M+ G + + +++ LC A ++ +
Sbjct: 264 TYSTIIDSLCKDRRVNEALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNE 322
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I P+ LLI +C +G + EA+ + + M G E V Y+ +++ S
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
EA K+ M G +V ++N+LI+ CK +R +A +LF M G P
Sbjct: 383 V-------VEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTP 435
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ LI L Q R+ E ++ M + G Y L C + +A +F
Sbjct: 436 DIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLF 495
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
M++ P+ Y++L+ C + +A LF E G++ + Y
Sbjct: 496 RAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIY 545
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 110/243 (45%), Gaps = 19/243 (7%)
Query: 212 NGYASYAEKLVKDTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
NGY+ AE + A ++F PD ++LI G+C ++ EAK+L EM
Sbjct: 375 NGYSLQAEVV---EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 431
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G V+YN ++D + +L R + EA + +M NG ++ T+++L+ CK
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLR-------EAHDLFKNMLTNGNLPDLCTYSILLDGFCK 484
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
A +LF M PN + +LI ++ ++ + E ++ + G +
Sbjct: 485 QGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQI 544
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC +++A+ F M+ DG P+ +Y++++ + H +A L E
Sbjct: 545 YTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR 604
Query: 443 RNG 445
G
Sbjct: 605 EKG 607
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I+ +A R + F M G D S +++ LC+ G A L K+ N
Sbjct: 409 INGYCKAKRIGEAKQLFNEMIHQ-GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD +L+ G+C G L +A RL R M + V YN ++D +C+ ++
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID---AMCKSRNL- 523
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA K+ ++ G+ NV+ + +I+ LCK ++A++ F M E GC PNE ++
Sbjct: 524 ---KEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSY 580
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
V+I+ Q ++I M+ G+
Sbjct: 581 NVIIRGFLQHKDESRAVQLIGEMREKGFV 609
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 7/219 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ LI G C GK +A L +M G++ Y I ++ LC+ + A
Sbjct: 196 NTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTI---INGLCKIGETV----AAAG 248
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+ M G +V T++ +I +LCK RR +A+ +F M G PN T+ LI+ L
Sbjct: 249 LFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLC 308
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+R E M++ M S + + C + +A V + M G P+
Sbjct: 309 NFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVV 368
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY LM + V +A LFD + G + Y +
Sbjct: 369 TYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI 407
>gi|293333002|ref|NP_001168049.1| uncharacterized protein LOC100381779 [Zea mays]
gi|223945693|gb|ACN26930.1| unknown [Zea mays]
gi|414871082|tpg|DAA49639.1| TPA: hypothetical protein ZEAMMB73_603879 [Zea mays]
Length = 582
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 130/305 (42%), Gaps = 9/305 (2%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
I D +V + +V K I LVR G + E M G D + +++ +L
Sbjct: 145 IIDEMVLHGQVPDSKCCVRLIRGLVRTGNTNKARHVLEVMVLSGGVP-DTITCNMLIGQL 203
Query: 210 CENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C G S A K+++D P + LI+ C D A +E + G+
Sbjct: 204 CCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHLYDRAVSFWKEQLKIGWPPYE 263
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ ++D + K C P R A +VL +++ G +V ++N LIS CK +D
Sbjct: 264 MTSTLLVDLICKQC---GPMR----ALEVLDELDLEGCQPHVVSYNTLISASCKAGCLKD 316
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A + R+ G PN TT+ +L+ SL R E +++ MK A + Y F+
Sbjct: 317 AKLILTRLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVTAYNIFIN 376
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
C ++QA+ V E M ++ PD TY+ L+ V +A +F NG +V
Sbjct: 377 YFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLNAISKRGMVQEALGIFHSIRENGCQV 436
Query: 449 KPKEY 453
Y
Sbjct: 437 VRITY 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 9/260 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ LI C G L +AK + + G E Y CIL + LC K R SE
Sbjct: 302 NTLISASCKAGCLKDAKLILTRLSAEGLEPNGTTY-CIL--LHSLCDK----RRWSEVGD 354
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M+ +V +N+ I+ C+ + AI + M C P+ T+ L+ ++
Sbjct: 355 LLAHMKQANHKPDVTAYNIFINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLNAIS 414
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ V E + ++ G + + Y + L I AM++F++M DG NPD
Sbjct: 415 KRGMVQEALGIFHSIRENGCQVVRITYNTLIDALAKRGDIINAMTLFDEMIVDGINPDDV 474
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLP 476
TY L+ +C N +A L ++ + G EVK + + + L K K E L
Sbjct: 475 TYGSLIMGFCKKNMAKEALELLNQMLALGFEVKATTFSMMIQALCK--GCKAEAAAEILR 532
Query: 477 EKMARKRRRLKQIRLSFVKK 496
++R LS V +
Sbjct: 533 VMVSRNVNHRSAFYLSIVTR 552
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 7/213 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++ I +C G LD+A + M V YN +L+ +SK +
Sbjct: 366 PDVTAYNIFINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLNAISKR-------GM 418
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA + + NG T+N LI L K +A+ LF M G +P++ T+
Sbjct: 419 VQEALGIFHSIRENGCQVVRITYNTLIDALAKRGDIINAMTLFDEMIVDGINPDDVTYGS 478
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI + E E++++M + G+ + + + LC + E A + M +
Sbjct: 479 LIMGFCKKNMAKEALELLNQMLALGFEVKATTFSMMIQALCKGCKAEAAAEILRVMVSRN 538
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
N S Y ++T+ R+ +A L E R
Sbjct: 539 VNHRSAFYLSIVTRVAKSGRLKEAQILHQELYR 571
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + D S +++ L G EKL+ +E P+ +LI C DGK++EA
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L + M G +Y+ + ++ CR+ RLD E L M +G ++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPL---IAAFCREG---RLDVAIE-FLETMISDGCLPDIVN 405
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +++ LCK +++ A+++F ++GE GC PN +++ + +L+ + MI M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
S G + Y ++ LC +++A + M++ +P TY++++ +C +R++
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A + + V NG Y V
Sbjct: 526 DAINVLESMVGNGCRPNETTYTV 548
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 12/296 (4%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+V L + ++ R T+VL +RM R F D + +++ LC G A
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVL---DRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 219 EKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
K++ ++ P +LI+ ++G +DEA +L EM G + YN I
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI--- 269
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ +C++ + A +++ ++E G +V ++N+L+ L + E+ KL +M
Sbjct: 270 IRGMCKEG----MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
C PN T+ +LI +L + ++ E ++ MK G Y + C R++
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
A+ E M +DG PD Y+ ++ C + + D+A +F + G Y
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 34/246 (13%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC-RKKDPFR 289
PD + LI G+C ++D+A R+ M F TV YN + + LC R K
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM---IGSLCSRGKLDLA 212
Query: 290 LD------------------------------SEAEKVLLDMEYNGVPRNVETFNVLISN 319
L EA K++ +M G+ ++ T+N +I
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
+CK + A ++ + GC P+ ++ +L+++L + EG++++ +M S
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y +T LC +IE+AM++ + MK G PD+ +YD L+ +C R+D A +
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 440 EAVRNG 445
+ +G
Sbjct: 393 TMISDG 398
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I R GR + F E M D G D + V+ LC+NG A D A EI
Sbjct: 375 IAAFCREGRLDVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGKA--------DQALEI 425
Query: 230 F---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
F P+ + + G A + EM G + + YN ++ C
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC--- 482
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LCR+ + EA ++L+DM +V T+N+++ CK R EDAI + M G
Sbjct: 483 LCREG----MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
C PNETT+ VLI+ + A E E+ + +
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 8/231 (3%)
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G E+ L M R G YN + +KL + R +A +V+ +E
Sbjct: 100 CRSGNYIESLHLLETMVRKG-------YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G P +V +N LI+ CK+ R +DA ++ RM P+ T+ ++I SL ++
Sbjct: 153 FGQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++++++ S Y + +++A+ + ++M + G PD TY+ ++
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
C VD+A + G E Y + R L ++G+K T
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 32/329 (9%)
Query: 163 PKTLASC--IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
P L+ C + L R G+ + M R+ D + +V++ LC+ S A +
Sbjct: 33 PNALSYCYLVKALCRTGKIDKACSTIAEMARE-KLVPDVFTYNVVIDTLCKARRISRAIE 91
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ PD + L+ G C +G++ +A L M G V Y ++D K
Sbjct: 92 FFETMPE---PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 148
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+C+ + + L L M V ++ +I+ LCK R+ + A +LF M G
Sbjct: 149 MCQFETAYGL-------LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 201
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P+ T+ LI L R+ E +++ M G+ K + + LC +RI++A
Sbjct: 202 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAF 261
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR-- 458
+F+ M G PD T+ +L++K C ++ A ++ VRN Y P
Sbjct: 262 VLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV----VRN--------YPACPEAV 309
Query: 459 YLKKPIAVKKGKKR-----ETLPEKMARK 482
L PI + G++R L +KMAR+
Sbjct: 310 ILYTPIFRELGRRRGFDRAARLLQKMARR 338
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 124/337 (36%), Gaps = 81/337 (24%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L +A R ++ + FFE M D + ++ LC+NG + A L
Sbjct: 77 IDTLCKARRISRAIEFFETMPEP-----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAG 131
Query: 229 IFPDD-----------KICDL------------------------LIKGWCVDGKLDEAK 253
I P D K+C +I G C + K+D+A
Sbjct: 132 ITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAY 191
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+L EM G + V YN + + LC K+ RL EA+ +L M NG + TF
Sbjct: 192 QLFEEMKLAGCKPDRVTYNTL---IHGLCVKQ---RLH-EAKDLLTVMVENGFQPDKITF 244
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL---------------YQA 358
LI LC R ++A LF M + GC P+ T VL+ L Y A
Sbjct: 245 TALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPA 304
Query: 359 A----------------RVG--EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
R G ++ +M G Y F L + +A
Sbjct: 305 CPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAY 364
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
F +M G PD Y++L+ +C +R+D A +
Sbjct: 365 REFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKM 401
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T N L+ L + RRSE + +F R+ C PN ++ L+K+L + ++ + I M
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
Y + LC RI +A+ FE M PD TY+ L+ C + RV
Sbjct: 62 AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRV 117
Query: 432 DKANALFDEAVRNGV 446
+A +LF G+
Sbjct: 118 AQACSLFGSMEGAGI 132
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A R R M G E VAYN ++D C+ RLD AEK++ M+ +G+P N+
Sbjct: 363 AYREFRRMLEQGIEPDMVAYNVLVD---GFCKAD---RLDM-AEKMVRYMDQSGLPPNIV 415
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
T+N L+ + C+ + E +L + M G P+ T+ L+ L+ VG+ D
Sbjct: 416 TYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFM---VGQAD 466
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 158/444 (35%), Gaps = 85/444 (19%)
Query: 39 NFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLE-----NLEADPLPISQRLH--LIFS 91
N LS + K ID IA +L+ N+ D L ++R+ + F
Sbjct: 34 NALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFF 93
Query: 92 HVTPTPSLV--QSTLNFSPEAGRAILGFNHWLT-QNANFSHTDETLSFFTDYFGRRKDFK 148
P P +V + L + GR + + + + A + +D T + D F + F+
Sbjct: 94 ETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 153
Query: 149 AIHDFL-VDNKEVLGPKTLASC--IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
+ L + P + C I+ L + + Q FE M+ G K D+ + +
Sbjct: 154 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLA-GCKPDRVTYNTL 212
Query: 206 VEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LC A+ L+ F DKI LI+G C ++ EA L + M + G
Sbjct: 213 IHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 272
Query: 265 ELGTVAYNCILDCVSKLC--RKKDPF---------------------------RLDSEAE 295
V + + VSKLC RK P R A
Sbjct: 273 APDLVTHTVL---VSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAA 329
Query: 296 KVLLDMEYNGVPRNVETF-----------------------------------NVLISNL 320
++L M GVP NV T+ NVL+
Sbjct: 330 RLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 389
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A K+ M + G PN T+ L+ + +V E++ M S G +
Sbjct: 390 CKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGR---Q 446
Query: 381 KDYYEFLTRLCGIERIEQAMSVFE 404
D + T + G+ + QA + +
Sbjct: 447 PDVATWSTLVAGLFMVGQADAAYS 470
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 145/325 (44%), Gaps = 14/325 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ L + G+ + F ME G K + + +V C +G A+ ++ +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETS-GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI G C G+L+EA ++ EM + G V YN ++D C K +
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID---GFCNKGN-- 341
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
LD A +M G+ + T+N LI L +R+++A + + E G P+ T+
Sbjct: 342 -LDM-ASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI + A + + D M ++G KK Y L L R+++A +F+K+ +
Sbjct: 400 NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
+G PD+ ++ L+ C+++ V A L + R ++V P E + K
Sbjct: 460 EGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDR--MKVPPDEVTFNTIMQGHCREGKV 517
Query: 469 GKKRETLPEKMARKRRRLKQIRLSF 493
+ RE E KRR +K +SF
Sbjct: 518 EEARELFDE---MKRRGIKPDHISF 539
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I C +GKL +AK M G + V YN I V C R+++ A+
Sbjct: 225 NIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI---VHGYCSSG---RVEA-ADA 277
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M+ + + T+ LIS +CK R E+A K+F M + G P+ + LI
Sbjct: 278 ILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC 337
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ D M G + Y + L +R ++A + ++++ G +PD+
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAI 397
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY++L+ +C KA L DE + +G++ K Y
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTY 434
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 218 AEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
AE ++K+ + I PD ++LI G+C +A L EM G + Y +L
Sbjct: 380 AECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLH 439
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+SK R K EA+ + + GV + FN LI C + A +L M
Sbjct: 440 VLSKKNRMK-------EADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER- 395
P+E TF +++ + +V E E+ D MK G K D+ F T + G R
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI---KPDHISFNTLISGYSRR 549
Query: 396 --IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
I+ A V +M G NP TY+ L+ C + D A L E V G+
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
F + D LIK C + DEA M G N +L KL R + +
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
L +E ++ + +V TFN++I+ LCK + + A M G PN T+
Sbjct: 208 LYAEMFRL-------RIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYN 260
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++ + RV D ++ MK Y ++ +C R+E+A +FE+M
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P + Y+ L+ +C +D A+A DE ++ G+
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+HD ++ + KT S + L + R + F+++ + G D +++
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLPDAIMFNALIDGH 476
Query: 210 CENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C N A +L+KD ++ PD+ + +++G C +GK++EA+ L EM R G +
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+++N ++ S+ KD FR+ +E +LD +N V T+N L+ LCK + +
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNE----MLDTGFNPT---VLTYNALVQGLCKNQEGDL 589
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
A +L M G P++TT+ LI+ + A+V DE
Sbjct: 590 AEELLKEMVSKGMTPDDTTYFTLIEGI---AKVNIPDE 624
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ +++ LC+ G A+ V + + P+ + ++ G+C G+++ A + M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
R E + Y + +S +C++ RL+ EA K+ +M G+ + +N LI
Sbjct: 283 KRQKIEPDSFTYGSL---ISGMCKQG---RLE-EASKIFEEMVQKGLRPSAVIYNTLIDG 335
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C + A M + G P +T+ LI +L+ R E + MI ++ G +
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + C ++A + ++M G P +TY L+ NR+ +A+ LF
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455
Query: 440 EAVRNGV 446
+ GV
Sbjct: 456 KITSEGV 462
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 138/323 (42%), Gaps = 42/323 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-----KD 224
I+ AG + L F+ M+R+ + D+ + ++ LC +G A KL+ K+
Sbjct: 52 INSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKN 111
Query: 225 TANEIFPDDKICDLLIK-------------------------------GWCVDGKLDEAK 253
A +F I L+K G+ +++A+
Sbjct: 112 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 171
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ + M G++ V+Y+ ++ ++K+ + + ++ SE + M G NV TF
Sbjct: 172 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSE-----MAMRAAGYVPNVITF 226
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+ LI LC+ E A+++F M E GC PN+ T+ LI L +A +V + E+ ++M
Sbjct: 227 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ 286
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCAHNRVD 432
A Y + C +++A ++ +M G P T++ L+ +C ++
Sbjct: 287 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 346
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
+AN L E G+ YR+
Sbjct: 347 RANELVAEMGTKGLAADTCTYRI 369
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 43/278 (15%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I L R G + L F M + G K +K + ++ LC A +L +
Sbjct: 225 TFSTLIHGLCRTGELEKALEVFGSM-LEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P D + + LI G+C G +DEA++L REM G
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA-------------------- 323
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
G+ + TFN LI CK+ + A +L MG G
Sbjct: 324 ---------------------GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAA 362
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +LI L +A ++ E E+ +M+ + + F+ LC I+QA +VF
Sbjct: 363 DTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVF 422
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
E + G P+ ET+ +L RV+ A L + A
Sbjct: 423 EATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 460
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 124/284 (43%), Gaps = 11/284 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI---FPDDKICDLLIKGWCVDGK 248
+ G+K D S +++ L + G + K++ + A P+ LI G C G+
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L++A + M G + Y + ++ LCR + +A ++ M +P
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTL---IAGLCRAEKVI----QARELFEKMTQACIPP 291
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRM-GEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
+ +N LI+ CK ++A KL+ M G G P TF LI + ++G +E+
Sbjct: 292 DAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 351
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M + G A Y + L ++++A+ V+++M+ D + + C
Sbjct: 352 VAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 411
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+D+A A+F+ ++G P+ +R+ L K V+ +K
Sbjct: 412 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQK 455
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
D+ VV+ L + G + A ++ + +E P ++LI C G+ +A L +
Sbjct: 11 DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQS 70
Query: 259 MYRGG-FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
M R E YN + +S LC + A K+L +M + NV T++ +I
Sbjct: 71 MKREKRVEPDRWTYNTL---ISGLCSSGNT----EGARKLLSEMRDKNIAANVFTYSSII 123
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+L K + E++ K+ M GC+P+ F +++ ++ + + E+ M +GY
Sbjct: 124 KSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYK 183
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEK--MKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y+ + L I ++++++ + + M+ G+ P+ T+ L+ C ++KA
Sbjct: 184 PDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 243
Query: 436 ALFDEAVRNGVEVKPKEY 453
+F + G KP +Y
Sbjct: 244 EVFGSMLEAG--CKPNKY 259
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 8/188 (4%)
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M + +G AY+ ++ ++K + ++A +V M+ ++ T+NVLI+
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKA-------GMLAQALEVFETMKSESCVPSLVTYNVLIN 53
Query: 319 NLCKIRRSEDAIKLFYRMG-EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ C A+ LF M E P+ T+ LI L + +++ M+ A
Sbjct: 54 SRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIA 113
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + L + E++ V E+M G NPD ++ +M + N ++KA +
Sbjct: 114 ANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREV 173
Query: 438 FDEAVRNG 445
+ V +G
Sbjct: 174 YQHMVESG 181
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 35/316 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ + + GR F M YG D S V+ LC G +A++L+ + +
Sbjct: 334 INAICKQGRVDDAYDFLNNMGM-YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 392
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CV-------- 278
P +++ + I C G +++A +L M G +G V YN ++ CV
Sbjct: 393 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 452
Query: 279 -------------------SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ LC + RLD+ AE +L +M P N TFNVL+S
Sbjct: 453 ELFNNLPCEPNTITYTTLLTGLCHAE---RLDAAAE-LLAEMIQKDCPLNAVTFNVLVSF 508
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C+ E+A++L +M E GC PN TF L+ + + E E++ + S G ++
Sbjct: 509 FCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD 568
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + L +R E+A+ + ++ G P Y+ ++ C D+A F
Sbjct: 569 TITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFA 628
Query: 440 EAVRNGVEVKPKEYRV 455
V NG Y +
Sbjct: 629 YMVSNGCMPNESTYII 644
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 20/291 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC-----ENGYASYAEKLVKD 224
I+ + R GR R+ YGF+ D S V++ LC ++ +AE + K
Sbjct: 229 INGMCREGRVDDAKEILNRLS-SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK- 286
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ P++ D+L++ +C G ++ A ++ ++M + G T N +++ + K R
Sbjct: 287 ---KCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRV 343
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D + L +M G + ++ ++ LC+ R E A +L M C PN
Sbjct: 344 DDAYDF-------LNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 396
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
E TF I L Q + + ++I+ M G ++G Y + C R++ A+ +F
Sbjct: 397 EVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN 456
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ + P++ TY L+T C R+D A L E ++ + + V
Sbjct: 457 NLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNV 504
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 29/265 (10%)
Query: 204 LVVEKLCEN-GYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+++E +C++ G+ L + A P+ +++I G C +G++D+AK + +
Sbjct: 192 VLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY 251
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSE----------------------------A 294
GF+ V+Y +L + R D L +E A
Sbjct: 252 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 311
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+VL M +G N N++I+ +CK R +DA MG +GC+P+ ++ +++
Sbjct: 312 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 371
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L +A R E++ M + + F+ LC IEQA+ + E M G +
Sbjct: 372 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 431
Query: 415 SETYDLLMTKWCAHNRVDKANALFD 439
TY+ L+ +C RVD A LF+
Sbjct: 432 IVTYNALVHGFCVQGRVDSALELFN 456
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 148/369 (40%), Gaps = 17/369 (4%)
Query: 84 QRLHLIFSH-VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDY-- 140
Q L + H TP +L +N + GR ++ +L + +T+S+ T
Sbjct: 313 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD-FLNNMGMYGCNPDTISYTTVLRG 371
Query: 141 ---FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
GR + K + +V T + I L + G Q + E M +YG
Sbjct: 372 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP-EYGCSV 430
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ +V C G A +L + E P+ L+ G C +LD A L
Sbjct: 431 GIVTYNALVHGFCVQGRVDSALELFNNLPCE--PNTITYTTLLTGLCHAERLDAAAELLA 488
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
EM + L V +N + VS C+K EA +++ M +G N+ TFN L+
Sbjct: 489 EMIQKDCPLNAVTFNVL---VSFFCQKG----FVEEAMELVNQMMEHGCTPNLITFNTLL 541
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ K SE+A++L + + G + T+ ++ L + R E +M+ ++ G
Sbjct: 542 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR 601
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + L LC +QA+ F M ++G P+ TY +L+ + +A +
Sbjct: 602 PKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYV 661
Query: 438 FDEAVRNGV 446
E GV
Sbjct: 662 LSELYAKGV 670
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G +V T+ VL+ +CK +A+ + M GC PN T+ V+I + + R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V + E+++R+ S G+ Y L LC R + +F +M P+ T+D+
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 421 LMTKWCAHNRVDKANALFDEAVRNG-----------VEVKPKEYRVDPRY 459
L+ +C V++A + + ++G + K+ RVD Y
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 347
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 160/364 (43%), Gaps = 29/364 (7%)
Query: 105 NFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK 164
+ E ++ +N + + DE L F D K ++A H +V+
Sbjct: 171 SMGEECSPNVITYNTVVNGLCKANRIDEALELFDDM---EKRYEASHGC---EPDVISYS 224
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ ID L +A R + +F+RM R G + + +++ LC+ S +L+
Sbjct: 225 TV---IDALCKAQRVDKAYEYFKRM-RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLH 280
Query: 225 TANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ F + I + ++ + + ++A + + + G + V YN V LC+
Sbjct: 281 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVA---VHGLCK 337
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R+D EA ++LL+M + V +V T++ +I CK R + A +F RM C P
Sbjct: 338 AG---RVD-EAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIP 393
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ TF+ L+ + + E + + M +AG+ G + Y + +CG + +E A+ ++
Sbjct: 394 HPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIY 453
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF-----DEAVRNG------VEVKPKE 452
KMK PD TY L+ C RVD+A D V NG VEV K+
Sbjct: 454 HKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQ 513
Query: 453 YRVD 456
VD
Sbjct: 514 GEVD 517
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 41/305 (13%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI-FPDDKICD 237
P FF+ GF+ + + +++ + A +L+K+ + FP++ +
Sbjct: 56 PDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYT 115
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK------DPF--- 288
+I G+C G++D+A L EM G ++ + ++ + + LCRK + F
Sbjct: 116 TVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTL---IQGLCRKGRIDEALEQFKSM 172
Query: 289 ----------------------RLDSEAEKVLLDME-----YNGVPRNVETFNVLISNLC 321
R+D EA ++ DME +G +V +++ +I LC
Sbjct: 173 GEECSPNVITYNTVVNGLCKANRID-EALELFDDMEKRYEASHGCEPDVISYSTVIDALC 231
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K +R + A + F RM GC PN T+ LI L + R E E++ MK G+ I
Sbjct: 232 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINII 291
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
D+ L L + E+A FE++ G P+ TY++ + C RVD+A + E
Sbjct: 292 DFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEM 351
Query: 442 VRNGV 446
V + V
Sbjct: 352 VESKV 356
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 144/325 (44%), Gaps = 54/325 (16%)
Query: 134 LSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
L F+++ R+ F+ +H+ +V+ + G +T +D + A L + +M+R
Sbjct: 402 LHGFSEHKKSREAFR-VHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK- 459
Query: 194 GFKR--DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLD 250
KR D ++ +++ LC A++ + A+ + P+ IC L++ C G++D
Sbjct: 460 --KRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVD 517
Query: 251 EAKRLAREMYRGGFE-LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
EA + + G + LG K+ ++ R EA LL G +
Sbjct: 518 EACSVLDNVVEVGCQPLGET---------FKILVEELYLRKKWEAASKLL--RSPGFVAD 566
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
T+++ ++ +CK + ++A+++ +M G P+E T++ +++SL
Sbjct: 567 AATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSL-------------- 612
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
CG++R+E A++ FEKM + G P TY LL+ + C+ +
Sbjct: 613 ---------------------CGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSAD 651
Query: 430 RVDKANALFDEAVRNGVEVKPKEYR 454
D+A +F+ V G + + R
Sbjct: 652 MADEAFRIFEAMVAAGFTPQAQTMR 676
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 17/304 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG----YASYAEK 220
T +S ID L + RP++ L M ++ GF + ++ L +N + E+
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHM-KEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 315
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
L+K P+ ++ + G C G++DEA R+ EM + Y+ I+D
Sbjct: 316 LLKSGKK---PNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIID---G 369
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
C+ R+D + M + +P V TF L+ + ++S +A ++ M G
Sbjct: 370 FCKAG---RMDKADDVFTRMMVHECIPHPV-TFMTLLHGFSEHKKSREAFRVHEDMVNAG 425
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P T+ VL+ + A V E+ +MK Y + LC R+++A
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAK 485
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR--VDPR 458
+ M+ D P+ L+ C VD+A ++ D V G + + ++ V+
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Query: 459 YLKK 462
YL+K
Sbjct: 546 YLRK 549
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 8/283 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + G + F ++ R +K + + ++ C+ + AE L+
Sbjct: 338 THTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSR 397
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ K LI G G ++A L M + GF YN +D LC+
Sbjct: 398 MKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFID---SLCK 454
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA K+L G+ + T+ +LIS LC+ + +A+ F +M + G P
Sbjct: 455 KGRFL----EACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQP 510
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI + + R+ E +++ G K+ Y + C + A+ F
Sbjct: 511 DMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFF 570
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M G PDS TY L++ C +++D+A L++ V G+
Sbjct: 571 NRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGL 613
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 37/305 (12%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS----YAEKLVKDTANEIF 230
R GR + + + M R GF D + L++ CE G+AS Y +K V+
Sbjct: 243 RMGRISDTDRWLKDMVRR-GFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLK--- 298
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ LI G C G + +A + EM + G++ + ++D + K + FRL
Sbjct: 299 PNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRL 358
Query: 291 D-----------------------------SEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
+ AE +L M+ G+ N +T+ LI
Sbjct: 359 FLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHS 418
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K E A +L MG+ G N T+ I SL + R E +++ + G
Sbjct: 419 KAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTV 478
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y ++ LC +A+ F KM G PD TY+ L+ + R++++ LF EA
Sbjct: 479 TYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEA 538
Query: 442 VRNGV 446
V G+
Sbjct: 539 VGLGL 543
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ I C G+ EA +L ++ +R G + TV Y + +S+LCR+ D EA
Sbjct: 446 NAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTIL---ISELCRRADT----REALV 498
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
M GV ++ T+N LI+ + RR E++ KLF G P + T+ +I
Sbjct: 499 FFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYC 558
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ V + +RM G Y ++ LC ++++A ++E M G +P
Sbjct: 559 RDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEV 618
Query: 417 TYDLLMTKWCAHNRVDKANAL 437
T L ++C + D A A+
Sbjct: 619 TRLTLAYEYCKQD--DSATAM 637
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 158/439 (35%), Gaps = 89/439 (20%)
Query: 90 FSHVTPTPSLVQS---TLNFSPEAGRAILGFNHWLTQNANFSHTDET---LSFFTDYFGR 143
+S TP L+QS L+ +P++ L +T A+ + + LSFF G
Sbjct: 79 YSQQTPHVRLLQSPSINLSVNPDS----LTHEQAITVVASLASEAGSMVALSFFNWAIGF 134
Query: 144 RKDFKAIHDFLVDNKEVLGPKTLA---SCIDRLVRA----GRPTQVLGFFERMERDYGFK 196
K + ++V +G + +D +VR G+ + + ME ++G
Sbjct: 135 PKFRYFMRFYIVCATSFIGNENFERAHEVMDCMVRVFAEIGKFQEAVNMVIEME-NHGLV 193
Query: 197 RDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRL 255
+L V E G YAE + + + PD L+ +C G++ + R
Sbjct: 194 LTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRW 253
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL------------------------- 290
++M R GF + C L +S C K R+
Sbjct: 254 LKDMVRRGFVVDNA--TCTL-MISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLING 310
Query: 291 ------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY---------- 334
+A ++L +M G NV T LI LCK +E A +LF
Sbjct: 311 LCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKP 370
Query: 335 --------------------------RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
RM E G PN T+ LI +A + E++
Sbjct: 371 NVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELM 430
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
D M G++ Y F+ LC R +A + +K G D+ TY +L+++ C
Sbjct: 431 DLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRR 490
Query: 429 NRVDKANALFDEAVRNGVE 447
+A F + + GV+
Sbjct: 491 ADTREALVFFSKMFKAGVQ 509
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 13/313 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + + D + V T + ID ++GR LG ME + G D +
Sbjct: 302 GRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGN-GCNPDDWT 360
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
++ LC G AE+L+ F I +I G+C K+D+A R+ M
Sbjct: 361 YNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMI 419
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L AY ++ + K R K EA+ L ++ NG+ NV + +I
Sbjct: 420 SSKCKLDLQAYGVLISVLIKKHRLK-------EAKDTLNEIFANGLSPNVVIYTSIIDAY 472
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK+ + A+++F GC PN T+ LI L Q ++ + +I +M+ G G
Sbjct: 473 CKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 532
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C + A +FE M+ +G PD + Y++L C R ++A +
Sbjct: 533 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL-- 590
Query: 441 AVRNGVEVKPKEY 453
V+ GV + Y
Sbjct: 591 -VKKGVVLTKVTY 602
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 138/335 (41%), Gaps = 25/335 (7%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV 174
L F W+ + F HT + + RR+ A +D K V+ + + + +
Sbjct: 74 LAFFEWVARRPGFRHTAASHAALLQLLARRRA-PANYD-----KLVVSMISCSGTAEDMR 127
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDS---LRLVVEKLCENGYASYAEKLVKDTANE-IF 230
A Q + R G KR S L + L + KL E +
Sbjct: 128 EAVDAIQAI-------RRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLL 180
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + +I +C +G L A R R + G E+ T N +L CR D
Sbjct: 181 PDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALL---LGYCRTGDL--- 234
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A +L+ M G RN ++ +LI LC+ R +A+ L M + GC PN T+ +
Sbjct: 235 -RKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTL 293
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI+ L + R+ + ++D M G Y + C R++ A+ + M+ +G
Sbjct: 294 LIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNG 353
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
NPD TY+ L+ C + D+A L + A+ G
Sbjct: 354 CNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARG 387
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 12/289 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTA 226
S ID + G+ L F+ E + G + + + ++ L ++ A L+ K
Sbjct: 467 SIIDAYCKVGKVGAALEVFKLTEHE-GCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 525
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ I P LI+G C + D A RL M + G AYN + D + K R ++
Sbjct: 526 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEE 585
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+ + GV T+ L+ K +E A L +M GC +
Sbjct: 586 AYSF----------LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSH 635
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ VL+++L + ++ E ++D+M G Y ++ + + + A S+F +M
Sbjct: 636 TYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM 695
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ GH P + TY + ++ +C R+++A L E RNGV Y V
Sbjct: 696 ISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNV 744
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 138/345 (40%), Gaps = 33/345 (9%)
Query: 131 DETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERME 190
++ + TD + + + FLV VL T S +D +AG E+M
Sbjct: 567 EQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMV 626
Query: 191 RDYGFKRDKDSLRLVVEKLCE----NGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCV 245
+ G K D + ++++ LC+ N S +++ ++ I I +IK
Sbjct: 627 NE-GCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIK---- 681
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
+GK D AK + EM G + + Y + K+ R + EA ++ +ME NG
Sbjct: 682 EGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIE-------EAGHLIGEMERNG 734
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK-----SLYQAAR 360
V +V T+NV I+ + + A RM + C PN T+ +L+K SL A
Sbjct: 735 VAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHY 794
Query: 361 VGEGD-----------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
V ++++RM G Y + C R+E+A + + M
Sbjct: 795 VDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGK 854
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+P+ E Y +L+ C +KA + + G + + Y
Sbjct: 855 DISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYH 899
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 109/290 (37%), Gaps = 22/290 (7%)
Query: 161 LGPKTLASCIDRLVRAG----RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
L P A+ + L RA P L FFE + R GF+ S +A+
Sbjct: 48 LAPFVTAAHVADLFRAPVAPLDPATALAFFEWVARRPGFRHTAAS------------HAA 95
Query: 217 YAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
+ L + A + DK+ +I + EA + + R G + ++ C
Sbjct: 96 LLQLLARRRAPANY--DKLVVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNL 153
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ L R F + K+ + G+ + T+N +I CK A + F +
Sbjct: 154 ALRSLLR----FDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLL 209
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
E G + T L+ + + + ++ M G + Y + LC +
Sbjct: 210 RESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCV 269
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+A+ + M DG +P+ TY LL+ C R+ A L DE R GV
Sbjct: 270 REALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGV 319
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 23/259 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-------ERDYGFKR-DKDSLR-------LVVEKL 209
T ++ ID +AG+ + FERM + D FK+ D +S R +++
Sbjct: 549 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 608
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C++ A KL+ + E P+ + D LI G C GKLDEA+ + EM GF
Sbjct: 609 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 668
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
Y+ ++D K+ R+ A KVL M N NV + +I LCK+ ++++
Sbjct: 669 YTYSSLIDRYFKVKRQ-------DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 721
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A KL M E GC PN T+ +I ++ E+++RM S G A Y +
Sbjct: 722 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781
Query: 389 RLCGIERIEQAMSVFEKMK 407
C ++ A ++ E+MK
Sbjct: 782 HCCKNGALDVAHNLLEEMK 800
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 112/267 (41%), Gaps = 32/267 (11%)
Query: 198 DKDSLRLVVEKLCENGYASY-AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
DKDSL + L E Y+ A +V + N + C GK ++A +
Sbjct: 379 DKDSLNFDLLDLAEKAYSEMLAAGVVLNKIN--------VSSFTRCLCSAGKYEKAFSVI 430
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
REM GF T Y+ +L+ + + + F L E M+ G+ +V T+ ++
Sbjct: 431 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE-------MKRGGLVADVYTYTIM 483
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ + CK E A K F M E GC PN T+ LI + +A +V +E+ + M S G
Sbjct: 484 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE----------------TYDL 420
Y + C ++E+A +FE+M PD + TY
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 603
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ +C +RV++A L D G E
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCE 630
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 114/295 (38%), Gaps = 15/295 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L A + FE M+R G D + ++V+ C+ G A K +
Sbjct: 444 TYSKVLNYLCNASKMELAFLLFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQARKWFNE 502
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--C---- 277
P+ LI + K+ A L M G V Y+ ++D C
Sbjct: 503 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 562
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEY-----NGVPRNVETFNVLISNLCKIRRSEDAIKL 332
V K C+ + R+ + +DM + N NV T+ L+ CK R E+A KL
Sbjct: 563 VEKACQIFE--RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 620
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M GC PN+ + LI L + ++ E E+ M G+ Y + R
Sbjct: 621 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 680
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++R + A V KM + P+ Y ++ C + D+A L G +
Sbjct: 681 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 735
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 151/410 (36%), Gaps = 68/410 (16%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV----DNKEVLGPKTLAS 168
A++ F W + + HT + D R D K +FL D+KEV G + L
Sbjct: 106 AVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFG-QFLNV 164
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFK-------------------------------- 196
+ + R G + L R+ +D+ F+
Sbjct: 165 LVRKHCRNGSFSIALEELGRL-KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 223
Query: 197 ---RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
D +LR LC+ G A LV +T N + PD LI G C +EA
Sbjct: 224 NLRMDGFTLRCFAYSLCKVGKWREALTLV-ETENFV-PDTVFYTKLISGLCEASLFEEAM 281
Query: 254 RLAREMYRGGFELGTVAYNCIL-DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
M V Y+ +L C++K + ++VL M G + +
Sbjct: 282 DFLNRMRATSCLPNVVTYSTLLCGCLNK--------KQLGRCKRVLNMMMMEGCYPSPKI 333
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM----- 367
FN L+ C A KL +M + G P + +LI S+ G+ D +
Sbjct: 334 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI-----CGDKDSLNFDLL 388
Query: 368 ------IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
M +AG + K + F LC + E+A SV +M G PD+ TY +
Sbjct: 389 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 448
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+ C ++++ A LF+E R G+ Y + K +++ +K
Sbjct: 449 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 498
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 126/350 (36%), Gaps = 60/350 (17%)
Query: 139 DYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFK-- 196
D FGR+ FL +E L + I+ L RP+ V+ FF R G+K
Sbjct: 72 DVFGRKS-----QKFLRQFREKLSESLV---IEVLRLIARPSAVISFFVWAGRQIGYKHT 123
Query: 197 ------------RDKDS---------------------LRLVVEKLCENGYASYA-EKLV 222
RD D L ++V K C NG S A E+L
Sbjct: 124 APVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELG 183
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ P + LI+ + +LD A + REM + C + K+
Sbjct: 184 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 243
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ ++ L E E N VP V + LIS LC+ E+A+ RM C
Sbjct: 244 KWREALTL-VETE--------NFVPDTV-FYTKLISGLCEASLFEEAMDFLNRMRATSCL 293
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ L+ ++G +++ M G K + + C A +
Sbjct: 294 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 353
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCA------HNRVDKANALFDEAVRNGV 446
+KM GH P Y++L+ C + +D A + E + GV
Sbjct: 354 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGV 403
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 123/303 (40%), Gaps = 25/303 (8%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D +AG Q +F M R+ G + + ++ + SYA +L + +E
Sbjct: 484 VDSFCKAGLIEQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 542
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAR-----------EMYRGGFELGT-----VAYN 272
P+ LI G C G++++A ++ +MY ++ + V Y
Sbjct: 543 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 602
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+LD K R + EA K+L M G N ++ LI LCK+ + ++A ++
Sbjct: 603 ALLDGFCKSHRVE-------EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
M E G T+ LI ++ R +++ +M A Y E + LC
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+ + ++A + + M+ G P+ TY ++ + +++ L + GV
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775
Query: 453 YRV 455
YRV
Sbjct: 776 YRV 778
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID G+ L ERM G + + R++++ C+NG A L+++
Sbjct: 740 TYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 798
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+P +I+G+ + + E+ L E+ + Y ++D + K R
Sbjct: 799 MKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQR 856
Query: 284 KKDPFRLDSEA---EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ RL E L+D T+N LI +LC + E A +LF M + G
Sbjct: 857 LEMALRLLEEVATFSATLVDYS--------STYNSLIESLCLANKVETAFQLFSEMTKKG 908
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMID 369
P +F LIK L++ +++ E ++D
Sbjct: 909 VIPEMQSFCSLIKGLFRNSKISEALLLLD 937
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ C+ G AE +V D ++ +++ + L+ G+C G +DEA RL M + G
Sbjct: 338 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 397
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
FE+ N I S CR EA+++LL ME GV NV +F++LI CK
Sbjct: 398 FEIDAFTCNII---ASGFCRSNRR----EEAKRLLLTMEERGVAPNVVSFSILIDIYCKE 450
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A +LF M + G P+ T+ I+ + ++ E ++I+ M+ G D
Sbjct: 451 QNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM---PDT 507
Query: 384 YEFLTRLCGIER----IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + + + G ER +++A+ +F +M G N + TY ++++ R D+A L+D
Sbjct: 508 YTYTSLIDG-ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYD 566
Query: 440 EAVRNGV 446
E + G+
Sbjct: 567 EMNKEGI 573
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 7/231 (3%)
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
T + P+ LI G C G++ A+ + +M G ++ V +N ++D C+K
Sbjct: 324 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD---GYCKK 380
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ EA ++ M+ G + T N++ S C+ R E+A +L M E G PN
Sbjct: 381 G----MIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPN 436
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+F +LI + E + M+ G A Y F+ R C ++E+A +
Sbjct: 437 VVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 496
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M+ G PD+ TY L+ A VD+A LF+E + G+ Y V
Sbjct: 497 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 547
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 9/284 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
FG K + D + + + V T + I+ +AG M+ G ++
Sbjct: 310 FGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK-GVDVNRV 368
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLAREM 259
+++ C+ G A +L + F D C+++ G+C + +EAKRL M
Sbjct: 369 IFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 428
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G V+++ ++D C++++ +EA ++ ME G +V T+N I
Sbjct: 429 EERGVAPNVVSFSILIDI---YCKEQNF----AEARRLFKVMEKKGKAPSVVTYNAFIER 481
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
CK + E+A KL M E G P+ T+ LI + V E+ + M G
Sbjct: 482 YCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRN 541
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
Y ++ L R ++A ++++M +G PD Y L+
Sbjct: 542 VVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 585
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 112/253 (44%), Gaps = 16/253 (6%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFP---------DDKICDLLIKGWCVDGKLDEAKRL 255
+VEK C+ + Y + + D++ E+F D++ C + G ++
Sbjct: 120 IVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEF 179
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
R+M G E+ ++ ++D LC+K + R A+ ++ ++ G +V T+N
Sbjct: 180 LRQMVDSGIEIRVCSWTAVVD---GLCKKGEVVR----AKALMDELVCKGFKPSVITYNT 232
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L++ +I+ ++ M + N TT+ +LI+ +++++ E +++ D M G
Sbjct: 233 LLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKG 292
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + C +++A +F++M P++ TY L+ C + A
Sbjct: 293 IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 352
Query: 436 ALFDEAVRNGVEV 448
+ ++ GV+V
Sbjct: 353 MMVNDMQSKGVDV 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 42/243 (17%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
++ G C G++ AK L E+ GF+ + YN +L+ ++ KD ++L
Sbjct: 198 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEI---KDV----GGVNEIL 250
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE---------------WGCH- 342
ME N V NV T+ +LI + + E+A KLF M + W C
Sbjct: 251 SLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKF 310
Query: 343 -------------------PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
PN T+ LI +A + + M++ M+S G + + +
Sbjct: 311 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 370
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C I++A+ + M+ G D+ T +++ + +C NR ++A L
Sbjct: 371 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 430
Query: 444 NGV 446
GV
Sbjct: 431 RGV 433
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
I+ +C GK++EA +L EM G T Y ++D ++ +D E +
Sbjct: 478 FIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID------GERASGNVDRALE-LF 530
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G+ RNV T+ V+IS L K R+++A KL+ M + G P++ + LI SL++
Sbjct: 531 NEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 590
Query: 359 ARVGEGDE-MIDRMKS 373
+ G E ++DR+++
Sbjct: 591 GPLVSGLENVVDRIET 606
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 152/362 (41%), Gaps = 20/362 (5%)
Query: 92 HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFK--- 148
H S V + L G AI F W + A F H T + + K++
Sbjct: 81 HGQVLGSHVAAVLRSLKVTGTAI-SFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCY 139
Query: 149 AIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
AIH+ ++ K + P T + I R R + FE M+R K D + ++V
Sbjct: 140 AIHEEML--KAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKR-CKPDLHTFLILV 196
Query: 207 EKLCENGYASYAEKLVKDTANEIF--PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LC+ G A ++ + F PD + +++ ++ EA+ + +M + GF
Sbjct: 197 DCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGF 256
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLISNLCKI 323
+AYN ++D ++K + EA KVL +M VP V T+ +L+++LCK
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQ-------EALKVLDNMLAKACVPTEV-TYGILVNSLCKA 308
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
E A +LF M G PN + LI ++ R+ E + D M AGY +
Sbjct: 309 GTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH 368
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC EQA FE+M G P+ TY ++ RV A + +
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428
Query: 444 NG 445
+G
Sbjct: 429 HG 430
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 123/296 (41%), Gaps = 26/296 (8%)
Query: 170 IDRLVRAGRPTQVLGFFERM--------ERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
ID L +AG + L + M E YG ++V LC+ G AE+L
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG---------ILVNSLCKAGTLERAEEL 317
Query: 222 VKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ A F P+ I LI G+ G++ EA L EM G+ + + ++D
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID---G 374
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
LC+ + +A K +M G NV T+ +I L KI R +A ++ M G
Sbjct: 375 LCKSGNF----EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P+ T++ L+ + R+ E +++D + + + Y + LC +E+ +
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490
Query: 401 S-VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+FE+ K D ++ C R+D+A +F V G + Y +
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 10/271 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L++A R + F +ME+ GF D + +++ L + G+A A K++ + A P
Sbjct: 235 LLKAKRVKEAREVFGQMEK-CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ +L+ C G L+ A+ L R M GF +V Y ++ +K R K
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK------ 347
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA + +M G +V T V+I LCK E A K F M GC PN T+ +
Sbjct: 348 -EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I+ L + RV ++ M + G Y L C + R+++A + +++
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466
Query: 412 NPDSETYDLLMTKWCAHNRVDKA-NALFDEA 441
+P+ + Y L+ C V+K + LF+++
Sbjct: 467 SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQS 497
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 120/291 (41%), Gaps = 12/291 (4%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN--GYAS 216
E L P S I L + GR + F+RM + G K D + +++ LC +
Sbjct: 502 ETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE-GCKPDATTYNILINGLCRSRENRVE 560
Query: 217 YAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
A L+ D + PD L G C G++D A ++ E G+ VAY +
Sbjct: 561 RAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL- 619
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ LC + R A + +M G + + +I+ L K+++ EDA K F
Sbjct: 620 --CTGLCYQGQVDR----AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDE 673
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR-LCGIE 394
M G P T+ L+++L A V E + M + G +G Y+ L C
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKAL 733
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+++ A+ +FE M + G+ P + T L + +KA L E G
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 21/250 (8%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDK---------ICDLLIKGWCVDGKLDEAKRL 255
+V LC+ G V+ T +++F K +C +I G C G+LDEA R+
Sbjct: 476 LVNGLCDGGS-------VEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRI 528
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
+ M G + YN + ++ LCR ++ R++ A +L D+E G + T+
Sbjct: 529 FQRMVSEGCKPDATTYNIL---INGLCRSREN-RVE-RAFALLHDLEKVGYLPDAVTYTP 583
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L LCKI + A+K+ G + + + L L +V + M G
Sbjct: 584 LCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
A Y + L ++++E A F++M G P TY L+ C VD+A
Sbjct: 644 GAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703
Query: 436 ALFDEAVRNG 445
F+ + G
Sbjct: 704 HRFESMLARG 713
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 18/298 (6%)
Query: 163 PKTLASCIDRL-VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
P+T +R V RP + FF + R +G +D +++ L ++ +A A L
Sbjct: 139 PRTFPIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASL 198
Query: 222 VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
V+ PD + L GWC A + R+M G YN IL
Sbjct: 199 VRALERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIIL------ 252
Query: 282 CRKKDPFRLDS--EAEKVLLDMEYNG-----VPRNVETFNVLISNLCKIRRSEDAIKLFY 334
K FR A L M+ G +V ++ ++ L + + A K+F
Sbjct: 253 ---KGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFD 309
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M GC P+ T+ LI+ + V + + D M GY Y + LC
Sbjct: 310 EMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAG 369
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+I++AM + +KMK +G P+ +TY++L+ ++KA LF E + G E P +
Sbjct: 370 KIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLF-ETMSKGEECLPNQ 426
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++ G V G+LD+A+++ EM R G YN ++ C+K +
Sbjct: 283 PDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVT---CKKGNV--- 336
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A V DM G NV T+ VLI LC + + A+KL +M GC PN T+ V
Sbjct: 337 -EDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNV 395
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI L++ + + + + M + +D Y + + + + M+V +M +
Sbjct: 396 LIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVE 454
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I + G+++ A + M GF V +N +++ KL D A+
Sbjct: 224 NIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHD-------AKA 276
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
L + +G+ +V TF LI LC + +DA F M EWG PN T+ VLI L
Sbjct: 277 FLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLC 336
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMKTDGHNP 413
A V + E++++MK G D Y F + C + +IE+A +F M G +P
Sbjct: 337 SAGHVSKAIELLNKMKMDGIT---PDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSP 393
Query: 414 DSETYDLLMTKWCAHNRVDKANALF 438
DS TY+ L+ C RVD+A +
Sbjct: 394 DSYTYNALIKALCDERRVDEAKEII 418
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
++IK + + +A + +M G +YN ++DC +K E E+
Sbjct: 190 MIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAK----------AGEVERA 239
Query: 298 LLD---MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
L M+ +G N+ TFN LI+ K+ DA + E G P+ TF LI
Sbjct: 240 LETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDG 299
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L ++ + M G + Y + LC + +A+ + KMK DG PD
Sbjct: 300 LCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPD 359
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +++ + +C +++KA LF++ R GV P Y
Sbjct: 360 AYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVS--PDSY 396
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 12/240 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID +AG + L + M+ GF + + ++ + G A+ +K
Sbjct: 227 IDCFAKAGEVERALETIKVMQES-GFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHG 285
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD LI G C +LD+A EM G YN + + LC
Sbjct: 286 LMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVL---IHGLCSAGHV- 341
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
S+A ++L M+ +G+ + +FN I + C++R+ E A KLF M +G P+ T+
Sbjct: 342 ---SKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTY 398
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD--YYEFLTRLCGIERIEQAMSVFEKM 406
LIK+L RV E E+I M+S IG K Y+ + L + R +A K+
Sbjct: 399 NALIKALCDERRVDEAKEIILAMESIS-CIGTKQHTYWPVVGALTKMGRFSEAGMFMNKL 457
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 9/249 (3%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
LG I +R ++ +F +M D G +S +V++ + G A +
Sbjct: 183 LGFDMYIMIIKSFLRCKDISKANKYFSQMVSD-GLLSSVESYNIVIDCFAKAGEVERALE 241
Query: 221 LVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+K F P+ + LI G+ G + +AK + + G + + ++D +
Sbjct: 242 TIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLC 301
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+ D F SE M GV NV+T+NVLI LC AI+L +M
Sbjct: 302 HTHQLDDAFNCFSE-------MSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMD 354
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ +F I S + ++ + ++ + M G + Y + LC R+++A
Sbjct: 355 GITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 414
Query: 400 MSVFEKMKT 408
+ M++
Sbjct: 415 KEIILAMES 423
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 7/205 (3%)
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA LA++M + G+ LG+ ++ ++ C K+ D L + K G
Sbjct: 133 EAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIK-------KGGNLGF 185
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+ + ++I + + + A K F +M G + ++ ++I +A V E I
Sbjct: 186 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKV 245
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ +G++ + + + + A + + + G PD T+ L+ C ++
Sbjct: 246 MQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQ 305
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+D A F E GV + Y V
Sbjct: 306 LDDAFNCFSEMSEWGVRPNVQTYNV 330
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 8/242 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + D + +V +C G A +LVK I P+ +L+ G+C +++EA
Sbjct: 5 GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 64
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ M G Y ++ + K+ +R+ SE +E + ++
Sbjct: 65 VCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEW------IESDPTLHSI-A 117
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
++ L+ L K ++A++L +M + G TTF ++I + + E++D
Sbjct: 118 YHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFI 177
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G +G Y + + I +A F +M +DG E+Y++++ + V+
Sbjct: 178 KKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVE 237
Query: 433 KA 434
+A
Sbjct: 238 RA 239
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M +G + T+N L+ +C+ ++A++L +M G PN T+ +L+ A+R
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60
Query: 361 VGEGDEMIDRMKSAGYAIGKKDY 383
V E +++RMK G + + Y
Sbjct: 61 VEEAVCVLERMKEKGVSATEATY 83
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ C+ G AE +V D ++ +++ + L+ G+C G +DEA RL M + G
Sbjct: 334 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 393
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
FE+ N I S CR EA+++LL ME GV NV +F++LI CK
Sbjct: 394 FEIDAFTCNII---ASGFCRSNRR----EEAKRLLLTMEERGVAPNVVSFSILIDIYCKE 446
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +A +LF M + G P+ T+ I+ + ++ E ++I+ M+ G D
Sbjct: 447 QNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM---PDT 503
Query: 384 YEFLTRLCGIER----IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + + + G ER +++A+ +F +M G N + TY ++++ R D+A L+D
Sbjct: 504 YTYTSLIDG-ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYD 562
Query: 440 EAVRNGV 446
E + G+
Sbjct: 563 EMNKEGI 569
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 7/231 (3%)
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
T + P+ LI G C G++ A+ + +M G ++ V +N ++D C+K
Sbjct: 320 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD---GYCKK 376
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ EA ++ M+ G + T N++ S C+ R E+A +L M E G PN
Sbjct: 377 G----MIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPN 432
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+F +LI + E + M+ G A Y F+ R C ++E+A +
Sbjct: 433 VVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 492
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M+ G PD+ TY L+ A VD+A LF+E + G+ Y V
Sbjct: 493 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 543
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 9/284 (3%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
FG K + D + + + V T + I+ +AG M+ G ++
Sbjct: 306 FGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK-GVDVNRV 364
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLAREM 259
+++ C+ G A +L + F D C+++ G+C + +EAKRL M
Sbjct: 365 IFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 424
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G V+++ ++D C++++ +EA ++ ME G +V T+N I
Sbjct: 425 EERGVAPNVVSFSILIDI---YCKEQNF----AEARRLFKVMEKKGKAPSVVTYNAFIER 477
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
CK + E+A KL M E G P+ T+ LI + V E+ + M G
Sbjct: 478 YCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRN 537
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
Y ++ L R ++A ++++M +G PD Y L+
Sbjct: 538 VVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 581
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 112/253 (44%), Gaps = 16/253 (6%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFP---------DDKICDLLIKGWCVDGKLDEAKRL 255
+VEK C+ + Y + + D++ E+F D++ C + G ++
Sbjct: 116 IVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEF 175
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
R+M G E+ ++ ++D LC+K + R A+ ++ ++ G +V T+N
Sbjct: 176 LRQMVDSGIEIRVCSWTAVVD---GLCKKGEVVR----AKALMDELVCKGFKPSVITYNT 228
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L++ +I+ ++ M + N TT+ +LI+ +++++ E +++ D M G
Sbjct: 229 LLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKG 288
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + C +++A +F++M P++ TY L+ C + A
Sbjct: 289 IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 348
Query: 436 ALFDEAVRNGVEV 448
+ ++ GV+V
Sbjct: 349 MMVNDMQSKGVDV 361
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 42/243 (17%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
++ G C G++ AK L E+ GF+ + YN +L+ ++ KD ++L
Sbjct: 194 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEI---KDV----GGVNEIL 246
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE---------------WGCH- 342
ME N V NV T+ +LI + + E+A KLF M + W C
Sbjct: 247 SLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKF 306
Query: 343 -------------------PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
PN T+ LI +A + + M++ M+S G + + +
Sbjct: 307 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 366
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ C I++A+ + M+ G D+ T +++ + +C NR ++A L
Sbjct: 367 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 426
Query: 444 NGV 446
GV
Sbjct: 427 RGV 429
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
I+ +C GK++EA +L EM G T Y ++D ++ +D E +
Sbjct: 474 FIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID------GERASGNVDRALE-LF 526
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G+ RNV T+ V+IS L K R+++A KL+ M + G P++ + LI SL++
Sbjct: 527 NEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 586
Query: 359 ARVGEGDE-MIDRMKS 373
+ G E ++DR+++
Sbjct: 587 GPLVSGLENVVDRIET 602
>gi|302813796|ref|XP_002988583.1| hypothetical protein SELMODRAFT_42378 [Selaginella moellendorffii]
gi|300143690|gb|EFJ10379.1| hypothetical protein SELMODRAFT_42378 [Selaginella moellendorffii]
Length = 478
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 22/260 (8%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
S L+V CE G A +LVK+ A ++ P++ ++KG+C G+++E A E
Sbjct: 1 SYNLLVRGYCEAGEVCKALRLVKEMKARDLAPNEATHGEILKGFCQIGRMEE----ALEH 56
Query: 260 YRGGFELGTV---AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+R + V YN ++D K+ + D F L AE++++D+ + +P V T N L
Sbjct: 57 FRSVIDTSGVDPAMYNTLIDGFCKVAKLSDAFNL---AEEMIVDLGW--MPSAV-TCNTL 110
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL----VLIKSLYQAARVGEGDEMI-DRM 371
++ LCK + A+KLF RM E + L LI L +A RV E E++ +R
Sbjct: 111 VAGLCKAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFERC 170
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCAHNR 430
K I Y + LC +R+E + + E+M T G NPD+ TY+ ++ +C +
Sbjct: 171 KDKAM-INAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDM 229
Query: 431 VDKANALFDEAVRNGVEVKP 450
V++A F V G + P
Sbjct: 230 VEQALEFFSN-VTQGNKCAP 248
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 12/286 (4%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
+K ++ T I L ++ R L E M G D + +V CE
Sbjct: 172 DKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVE 231
Query: 217 YAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
A + + N+ PD + L+ G C G+ +A L EM R G + + Y C+
Sbjct: 232 QALEFFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVY-CL 290
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLISNLCKIRRSEDAIK-L 332
+ + +LC + +A K+L + G P N T+ +++ L K R E A + L
Sbjct: 291 M--IEELCNSGEA----DKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHL 344
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
+ P+ T +I L ++ R E + M G Y L LC
Sbjct: 345 KGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCK 404
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
++ +A++ F +M+ +G P TY++L+ +C ++++A A+F
Sbjct: 405 AAKMGEALAFFHEMQDEGL-PSVVTYNILLDGFCKVVKIEEACAVF 449
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 110/279 (39%), Gaps = 13/279 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P + ID + + + E M D G+ + +V LC+ G A KL
Sbjct: 68 PAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKAGSFDKAVKLF 127
Query: 223 KDTA-----NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
A N + LI G C G++DEA L E + + V Y ++
Sbjct: 128 TRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFERCKDKAMINAVTYGILIQG 187
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ K R +D RL E G+ + T+N +++ C++ E A++ F +
Sbjct: 188 LCKSKRVEDGLRLLEEMST------SRGLNPDAATYNSIVAGFCELDMVEQALEFFSNVT 241
Query: 338 EWG-CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ C P+ L+ L ++ R + E+++ M G + Y + LC
Sbjct: 242 QGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEA 301
Query: 397 EQAMSVFEKMKTDGHNP-DSETYDLLMTKWCAHNRVDKA 434
++A + + G P ++ TY +++ +R +KA
Sbjct: 302 DKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKA 340
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 128/335 (38%), Gaps = 61/335 (18%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-G 263
+++ C+ G A + + + D + + LI G+C KL +A LA EM G
Sbjct: 40 ILKGFCQIGRMEEALEHFRSVIDTSGVDPAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLG 99
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM----EYNGVPRNVETFNVLISN 319
+ V N + V+ LC K F +A K+ M + N + N LI
Sbjct: 100 WMPSAVTCNTL---VAGLC-KAGSF---DKAVKLFTRMAERTKRNSTMVTLAAANALIDG 152
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA-GYAI 378
LC+ R ++A++L + + N T+ +LI+ L ++ RV +G +++ M ++ G
Sbjct: 153 LCRAGRVDEALELVFERCKDKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNP 212
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVF----------------------------------- 403
Y + C ++ +EQA+ F
Sbjct: 213 DAATYNSIVAGFCELDMVEQALEFFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALEL 272
Query: 404 -EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
E+M G P S+ Y L++ + C DKA L E +R G P
Sbjct: 273 LEEMDRVGCQPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRA---------PANTGT 323
Query: 463 PIAVKKGKKRETLPEKMARKRRRLKQIRLSFVKKP 497
+ G + PEK RR LK I S + P
Sbjct: 324 YTMIVDGLYKTHRPEK---ARRHLKGILSSSLSAP 355
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 47/243 (19%)
Query: 157 NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYAS 216
NK P + + ++ L ++GR Q L E M+R G + L++E+LC +G A
Sbjct: 244 NKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDR-VGCQPSSQVYCLMIEELCNSGEAD 302
Query: 217 YAEKLVKDT--------------------------------------ANEIFPDDKICDL 238
A KL+ +T ++ P
Sbjct: 303 KACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVTSCA 362
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G C G+ EA+ M + G + T YN +L LC+ EA
Sbjct: 363 IIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLL---GGLCKAAKM----GEALAFF 415
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M+ G+P +V T+N+L+ CK+ + E+A +F M + C P T+ L + ++
Sbjct: 416 HEMQDEGLP-SVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRS 474
Query: 359 ARV 361
++
Sbjct: 475 GKM 477
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 9/243 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLL 239
Q L FF + + D + +V LC++G + A +L+++ P ++ L+
Sbjct: 232 QALEFFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLM 291
Query: 240 IKGWCVDGKLDEAKRLAREMYRGG-FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
I+ C G+ D+A +L E R G T Y I+D + K R + R K +
Sbjct: 292 IEELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARR----HLKGI 347
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
L + +V T +I LCK R +A MG+ G N + L+ L +A
Sbjct: 348 LSSSLS--APSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKA 405
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
A++GE M+ G Y L C + +IE+A +VF M P + TY
Sbjct: 406 AKMGEALAFFHEMQDEGLP-SVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTY 464
Query: 419 DLL 421
L
Sbjct: 465 KTL 467
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 144/331 (43%), Gaps = 14/331 (4%)
Query: 121 LTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDN---KEVLGPKTL-ASCIDRLVRA 176
+ +N T T + D D + + +VD K V G L + I+ RA
Sbjct: 192 IMENGGIEATVGTYTILVDSLSTAGDISKV-EAVVDEMKAKNVAGDVYLYTAVINAYCRA 250
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC 236
G + F+ + G + ++ + +++ C+ G AE L+ D ++I
Sbjct: 251 GNVRRASEVFDECVGN-GIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQII 309
Query: 237 -DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ +I G+C G +D A ++ M + G EL YN L C LCR R+ +EA+
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYN-TLAC--GLCRVN---RM-AEAK 362
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+L M GVP N T+ LIS CK +A +LF M G P+ T+ V++
Sbjct: 363 TLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGY 422
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ + E + M+ G Y + C +++ A+ +FE+MK G P+
Sbjct: 423 IKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNV 482
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y L++ R ++A L+D+ ++ G+
Sbjct: 483 VAYTALISGLAKEGRSEEAFQLYDDMLKAGL 513
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 16/315 (5%)
Query: 139 DYFGRRKDFKAIHDFL--VDNKEV---LGPKTLASCIDRLVRAGRPTQVLGFFERMERDY 193
D + RRKD + + L ++N + +G T+ +D L AG ++V + M+
Sbjct: 175 DCYVRRKDDARVQELLEIMENGGIEATVGTYTI--LVDSLSTAGDISKVEAVVDEMKAK- 231
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEA 252
D V+ C G A ++ + N I P+++ +LI G+C G+++ A
Sbjct: 232 NVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAA 291
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L +M G + +N ++D CR+ + A KV ME G+ +V T
Sbjct: 292 EMLLADMQGRGVGHNQIIFNTMID---GYCRQG----MVDNALKVKAAMEKMGIELDVYT 344
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N L LC++ R +A L + M E G PN T+ LI + + E + M
Sbjct: 345 YNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMA 404
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + I +A ++M+ G PD TY L+ C + +VD
Sbjct: 405 GKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVD 464
Query: 433 KANALFDEAVRNGVE 447
A LF+E G E
Sbjct: 465 VALKLFEEMKHRGTE 479
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 42/244 (17%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+++ G+C G++D+A+ L EM R G L + YN +LDC R+KD D+ +++
Sbjct: 137 VVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDC---YVRRKD----DARVQEL 189
Query: 298 LLDMEYNGVPRNVETFNVLISNL-----------------------------------CK 322
L ME G+ V T+ +L+ +L C+
Sbjct: 190 LEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCR 249
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
A ++F G PNE T+ VLI + ++ + ++ M+ G +
Sbjct: 250 AGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQII 309
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + C ++ A+ V M+ G D TY+ L C NR+ +A L +
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369
Query: 443 RNGV 446
GV
Sbjct: 370 EKGV 373
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 122/344 (35%), Gaps = 52/344 (15%)
Query: 135 SFFTDYF---GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMER 191
S D F GR D +A+ D + + L S +D VR +V E ME
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLD 250
G + + ++V+ L G S E +V + A + D + +I +C G +
Sbjct: 196 G-GIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNV- 253
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
R A E++ +CV NG+ N
Sbjct: 254 ---RRASEVFD--------------ECVG------------------------NGIEPNE 272
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ VLI+ CKI + E A L M G N+ F +I + V ++
Sbjct: 273 RTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAA 332
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ G + Y LC + R+ +A ++ M G P+ TY L++ C
Sbjct: 333 MEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGD 392
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
+ +A LF E G Y V +KKG RE
Sbjct: 393 MVEARRLFREMAGKGAMPSVVTYNV-----MMDGYIKKGSIREA 431
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 156/348 (44%), Gaps = 14/348 (4%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRRKDFKA---IHDFLVDNKEVLGPKTLASCIDRL 173
F +W+++ S + + D GR + F+ + D + + + T ++R
Sbjct: 23 FFNWVSKEGTISLSSCVYNEILDILGRMRRFEELTLVLDEMSKREGFVDEDTYRVLVNRY 82
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDD 233
A + +G F + R+ G + D S + ++ LC + AE L+ +E D
Sbjct: 83 AGAHMVEEAIGAFNK-RRELGLELDLVSFQKLLMYLCRYKHVDVAETLLHSKGHEFGVDI 141
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
K ++++ GWCV G + EAKR +++ + Y + ++ + +L
Sbjct: 142 KTMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDVFTYGTFIKALTNKGKLGTAMKLYEA 201
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
K+ +V N +I LC +R +A+ +F M E GC PN T+ LIK
Sbjct: 202 MWKM-------QCKPDVVICNCVIDALCFKKRVPEALAVFEGMKERGCIPNVATYNSLIK 254
Query: 354 SLYQAARVGEGDEMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ + R+ + E++D M+ G + + + +L + +++ E+ V E+MK +G
Sbjct: 255 HMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLK--SLKKPEEVAGVLERMKINGCK 312
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
+++T +LL+ + +K ++E +NG+ + + Y + +L
Sbjct: 313 MNNDTCNLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIMIHWL 360
>gi|357150687|ref|XP_003575543.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Brachypodium distachyon]
Length = 1109
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 165/402 (41%), Gaps = 37/402 (9%)
Query: 56 IDDPDQVIARSLSGELLEN-LEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAI 114
+++ QV++ S + L++ LE PL TP+LV + + G A
Sbjct: 689 VEEMCQVLSSSDNWSLMQQALEMKPLQF-------------TPNLVNAVMKRCKRKGHAA 735
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK------TLAS 168
L F W+++ + HT ET + G KDFK + +E+ G + T
Sbjct: 736 LKFFSWVSRLTYYMHTTETYNTAMKLAGSAKDFKHMRHLY---REMAGAQCSPTVDTWNV 792
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC--ENGYASYAEKLVKDT- 225
I + AG L F +M++ GF+ DK + ++ L + A K++K+
Sbjct: 793 MICQYGNAGLSEMALDTFYQMKQQ-GFQPDKTTYNHLIMYLSRRKGRKVGAAVKILKEMI 851
Query: 226 -ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
A + ++ +C L C G L EA+ + + GF + Y+ +L + + RK
Sbjct: 852 HAGYLLDNEVLCTHL-SALCECGMLVEARSSLVSLCKQGFAI-QAGYSILLRSLCRSDRK 909
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ EA + D+E G RN + LI L + EDA+ F M G +
Sbjct: 910 E-------EAVSLFDDVEKYGCSRNDYMYGSLIHALLRWDCFEDAVAKFAEMKNAGIRQS 962
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ I ++ V + +M M G Y + G+ + +A VFE
Sbjct: 963 THMYTSFIIYFFRKRDVAKAVDMFKEMAENGCEPTVITYSALIRGYMGMGMVSEAWDVFE 1022
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+MK G +PD ETY + MT C R + L + + G+
Sbjct: 1023 RMKLKGPSPDFETYSMFMTFLCKAGRSEDGLQLIHDMLDGGI 1064
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 175/434 (40%), Gaps = 59/434 (13%)
Query: 81 PISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDY 140
P+ QRL + VT TP LV LN + F +W+ Q F HT ET +
Sbjct: 190 PVEQRLGNL--GVTYTPRLVNMVLNRCFKKRHLGCRFFYWVKQLPGFRHTTETYNTMMYI 247
Query: 141 FGRRKDFKAIHDFLVDNKEVLGP---KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
G + F + + + + + + P KT I +A + + +L F M++
Sbjct: 248 AGEERSFGLMVELMDEMDQEMCPKDVKTWTIIIASYGKARKTSNMLSTFHAMKKSGSVTV 307
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKD-----------------------TANEIF--PD 232
D R ++ LC + A + KD A +F D
Sbjct: 308 DTHVYRRILRALCNDARHELALEFYKDMPKNMDVGSDILRLLLCLLAGANNAEAVFLIRD 367
Query: 233 DKI---------CDL-LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
D + C L +++ +CV GK+ EA+++ ++M + + A+ +L LC
Sbjct: 368 DMVKSTRYPEEYCYLEVLRSFCVSGKIVEAQKVFQQMTNKSMD-SSSAFETLL---RGLC 423
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ R+D EA +V+ M+ N + F LI + A++L M E+GC
Sbjct: 424 KSG---RMD-EALQVMEHMK-NRSCISSTAFGFLIDGYLRKGERMKALELLRGMREYGCV 478
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P +++ L++ L+ + E+ + M+ G + I +A V
Sbjct: 479 PLASSYTQLMQHLFTFDQYEAACELYEEMQKNGVPPDIVTITALIAGHISNGHISKAWDV 538
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE---YRV---- 455
++K +G P + Y + + + C +R ++ L E + + + +P E YRV
Sbjct: 539 LRRIKENGQRPTMKAYTVFIQELCKASRPLESLELLKEMLES--DFRPSEEIFYRVVCAL 596
Query: 456 -DPRYLKKPIAVKK 468
D YL++ V+K
Sbjct: 597 RDNNYLEEASNVEK 610
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+A + +EM G E + Y S L R + SEA V M+ G +
Sbjct: 981 KAVDMFKEMAENGCEPTVITY-------SALIRGYMGMGMVSEAWDVFERMKLKGPSPDF 1033
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
ET+++ ++ LCK RSED ++L + M + G P+ F ++ L
Sbjct: 1034 ETYSMFMTFLCKAGRSEDGLQLIHDMLDGGIIPSAVNFRTVVHGL 1078
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 17/295 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + + L + G + L F E + F+ DK +V C G A+++V
Sbjct: 312 TYNTFVHMLSKHGHGDEALEFLREAE-ERRFRVDKVGYSAIVHSFCREGRMDKAKEIV-- 368
Query: 225 TANEIFPDDKICDLL-----IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
NE+F I D++ I G C + K+D+AK++ R+MY+ G + TV+Y +L+
Sbjct: 369 --NEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN--- 423
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC+ + EA +++ E + N T++VL+ + +S +A L M +
Sbjct: 424 GLCKNGNSL----EAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 479
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P +LI+SL Q +V E +++ + G A+ ++ + C + +E A
Sbjct: 480 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 539
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+S+ + M +PD TY ++ R+++A L + +R G+ P YR
Sbjct: 540 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYR 594
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 160/371 (43%), Gaps = 36/371 (9%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRR-----KDFKAI-HDFLVDN-----KEVLGPK- 164
F H L+++ H DE L F + RR + AI H F + KE++
Sbjct: 316 FVHMLSKHG---HGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372
Query: 165 ---------TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
T S I+ L + + Q +M + +G K + S ++ LC+NG +
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK-HGCKPNTVSYTALLNGLCKNGNS 431
Query: 216 SYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
A +++ + + + P+ +L+ G+ +GK EA L REM + GF V N +
Sbjct: 432 LEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 491
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ LC+++ ++D EA++ + NG NV F +I C+ E A+ L
Sbjct: 492 ---IQSLCQEE---KVD-EAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M HP+ T+ +I +L + R+ E ++ +M G Y + + C +
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMG 604
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE-Y 453
R+E + + EKM + Y+ ++ K C+ +++A L + +R ++ +
Sbjct: 605 RVEDLLKLLEKMLS--RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 662
Query: 454 RVDPRYLKKPI 464
+ YL K I
Sbjct: 663 MLIESYLSKGI 673
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 14/229 (6%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD IC+ I + +LD+A R M E + YNC++ L R +D
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAM 259
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM-GEWGCHPNETT 347
L +E M + G + ++ ++ LCK +R ++ L +M + P++ T
Sbjct: 260 ELIAE-------MPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVT 312
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAG---YAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ + L ++ G GDE ++ ++ A + + K Y + C R+++A +
Sbjct: 313 YNTFVHML---SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 369
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+M + G PD TY ++ C +VD+A + + ++G + Y
Sbjct: 370 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 418
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 6/212 (2%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
EI P+ + LIKG+C +L++A L EM G ++Y ++ LC++K
Sbjct: 234 EIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVM---GFLCKEKRI 290
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ EK+L D N +P V T+N + L K ++A++ E ++
Sbjct: 291 KEVRLLMEKMLKD--SNLLPDQV-TYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVG 347
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ ++ S + R+ + E+++ M S G Y + LC +++QA + +M
Sbjct: 348 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 407
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
G P++ +Y L+ C + +A + +
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMN 439
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 15/206 (7%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
AKR+ R M + E A+ ++ S+ + ++ R VL M+ G+ ++
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMR-------VLTMMQKAGIEPDLS 205
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
N I L R + A++ RM PN T+ LIK R+ + E+I M
Sbjct: 206 ICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEM 265
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNR 430
G + K YY + LC +RI++ + EKM D + PD TY+ + H
Sbjct: 266 PFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGH 325
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVD 456
D+A EA + + +RVD
Sbjct: 326 GDEALEFLREA-------EERRFRVD 344
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 9/242 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEA 252
GFK S ++ L + Y +K++ + FP D C++++ C GKL +A
Sbjct: 190 GFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKA 249
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ + ++M V YN IL+ K R K R +L DME NG+ ++ T
Sbjct: 250 ESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALR-------ILDDMEKNGIEADLYT 301
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N++I LCK++RS A L RM E P+E ++ LI + ++ + ++M
Sbjct: 302 YNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQML 361
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
Y + C R ++A V +M+ G P TY L+ +C H+++
Sbjct: 362 RQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLG 421
Query: 433 KA 434
A
Sbjct: 422 PA 423
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 122/295 (41%), Gaps = 28/295 (9%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL 239
++ + F + D F D + +V+ LC G S AE +++ N P+ + +
Sbjct: 211 SEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTI 270
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ + G+ A R+ +M + G E YN ++D + KL R + L +V L
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330
Query: 300 ---DMEYNGVPR-------------------------NVETFNVLISNLCKIRRSEDAIK 331
+ YN + +V T+ LI C+ R+++A +
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARR 390
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+ Y M G P+E T+ L+ + +++G ++I ++S +I + Y + C
Sbjct: 391 VLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFC 450
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ + +A + + M DG +PD TY L+ C + + + ++GV
Sbjct: 451 QLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGV 505
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ V+ GR L + ME++ G + D + ++++KLC+ ++ A L+K
Sbjct: 266 TYNTILNWYVKKGRCKSALRILDDMEKN-GIEADLYTYNIMIDKLCKLKRSARAYLLLKR 324
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD+ + LI G+ +GK++ A + +M R + Y ++D CR
Sbjct: 325 MREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALID---GYCR 381
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
R D EA +VL +M+ GV + T++ L++ CK + A+ L +
Sbjct: 382 NG---RTD-EARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISI 437
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N T + +LI Q V + +++ M + G Y + +C + I + +
Sbjct: 438 NRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEIL 497
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M+ G P++ Y L+ +C +A F + R+G+
Sbjct: 498 SRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGL 540
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 127/323 (39%), Gaps = 57/323 (17%)
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPD 232
++ G+ ++ L + M ++ G K D + RL++ LCE G A K ++ E +FPD
Sbjct: 801 IKKGQLSRTLYLYRDMVKE-GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPD 859
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREM-----YRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ D+LIK + K+ A +L M G FEL
Sbjct: 860 NLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKE------------------- 900
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
DM+ GV + + ++ LCK + E+AI +F + G P T
Sbjct: 901 ------------DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIAT 948
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
F L+ L + ++ + + M+S G + Y +T LC + I A+ ++E+MK
Sbjct: 949 FTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMK 1008
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVK 467
+ G P+ TY L A + L + G+ P Y
Sbjct: 1009 SKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIV---------PSY-------- 1051
Query: 468 KGKKRETLPEKMARKRRRLKQIR 490
K E+L +M +RL IR
Sbjct: 1052 --KHPESLEWRMENAIKRLNTIR 1072
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANE 228
ID + G ++ + M D G D + ++ +C+ G E L + +
Sbjct: 446 IDGFCQLGEVSKAKQILKCMLAD-GIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 504
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P++ + L+ +C G EA + ++YR G +V +N +L R+
Sbjct: 505 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALL---CSFYREG--- 558
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +EAE+ M + +V +FN +I + C+ +A ++ M G P+ T+
Sbjct: 559 -MIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 617
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L++ L Q + + E + + AI +K L +C +++A+ + EKM T
Sbjct: 618 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 677
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD+ TY +L+ +C +V A L + G+
Sbjct: 678 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGL 715
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 34/308 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D + G+ L + M + G D + ++ L G A + ++ +
Sbjct: 691 LDGFCKRGKVVPALILLQMM-LEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 749
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK---LCRK 284
++ D + ++ G+ G+++E +RL R M+ + +YN ++ K L R
Sbjct: 750 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 809
Query: 285 KDPFRLDSEAEKVLLDMEYNGV-PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+R DM G+ P NV T+ +LI LC+ E A+K +M G P
Sbjct: 810 LYLYR----------DMVKEGIKPDNV-TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFP 858
Query: 344 NETTFLVLIKSLYQAAR-------------VGEGD---EMIDRMKSAGYAIGKKDYYEFL 387
+ F +LIK+ + ++ VG+ D E+ + MK+ G + +
Sbjct: 859 DNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIV 918
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
LC ++E+A+ VF + G P T+ LM C ++D A L G++
Sbjct: 919 RGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLK 978
Query: 448 VKPKEYRV 455
V Y V
Sbjct: 979 VDVVTYNV 986
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 116/279 (41%), Gaps = 9/279 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ + + G + RM++ G + +V C+ G+A A K D
Sbjct: 476 TYSALINGMCKMGMIHETKEILSRMQKS-GVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 534
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + + I + L+ + +G + EA++ + M R ++NCI+D C+
Sbjct: 535 IYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIID---SYCQ 591
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + EA V +M +G P ++ T+ L+ LC+ A + + E C
Sbjct: 592 RGNVL----EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI 647
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T L+ + + + E ++ ++M + Y L C ++ A+ +
Sbjct: 648 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 707
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ M G PD+ Y L+ +V A+ +F E +
Sbjct: 708 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEII 746
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 7/243 (2%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D+ +L ++ +C++G A L K I PD +L+ G+C GK+ A L
Sbjct: 648 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 707
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G T+AY C+L+ + + K + E + G+ + +N +
Sbjct: 708 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI------ICKEGLYADCIAYNSM 761
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
++ K + + +L M E +P+ ++ +L+ + ++ + M G
Sbjct: 762 MNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGI 821
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + LC IE A+ EKM +G PD+ +D+L+ + +++ A
Sbjct: 822 KPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQ 881
Query: 437 LFD 439
LF
Sbjct: 882 LFS 884
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 99/218 (45%), Gaps = 10/218 (4%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
DLL+ + +GK+ +A M GF+ + N IL+ + + + + + E+
Sbjct: 164 DLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKES-- 221
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH-PNETTFLVLIKSL 355
LD ++ P +V T N+++++LC + A + +M C PN T+ ++
Sbjct: 222 --LDRKF---PLDVTTCNIVLNSLCTQGKLSKAESMLQKMKN--CRLPNAVTYNTILNWY 274
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ R ++D M+ G Y + +LC ++R +A + ++M+ PD
Sbjct: 275 VKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+Y+ L+ + +++ A +F++ +R ++ Y
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATY 372
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 14/274 (5%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F + DF V + K+ + D LV + +GF++ M R+ G SL +++
Sbjct: 108 FHKMEDFQVKPTQ----KSYLTVFDILVEENHVKRAIGFYKEM-REKGIPPTVVSLNILI 162
Query: 207 EKLCENG-YASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LC+N A +L ++ N PD LI G C GK+ +AK L EM G
Sbjct: 163 KALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGL 222
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
V+Y + + LC+ + LD EA ++L +M NG+ NV T++ L+ LCK
Sbjct: 223 SPSVVSYTSL---IHGLCQSNN---LD-EAIELLEEMIINGIEPNVFTYSSLMDGLCKSG 275
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
S A++L M PN T+ LI L + + E E++DRM+ G Y
Sbjct: 276 HSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYG 335
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ LC ++A + ++M G +P+ ++
Sbjct: 336 RIISGLCAACNYQEAANFIDEMALGGISPNRASW 369
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 151/358 (42%), Gaps = 16/358 (4%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNAN-FSHTDETLSFFTDYFGRRKDFKAIHDFL 154
T SLV+ + + + ++ F+ + +N F H T F+ L
Sbjct: 14 TNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGML 73
Query: 155 ----VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
++ EV L C R RP + F +ME D+ K + S V + L
Sbjct: 74 ERMKQEDCEVTEDVFLTIC-RGYGRVHRPLDAIRVFHKME-DFQVKPTQKSYLTVFDILV 131
Query: 211 ENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGK-LDEAKRLAREMYRGGFELGT 268
E + A K+ + P + ++LIK C + + ++ A RL REM G + +
Sbjct: 132 EENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDS 191
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
Y +++ + KL + S+A+++L +ME G+ +V ++ LI LC+ ++
Sbjct: 192 YTYGTLINGLCKLGKI-------SQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDE 244
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
AI+L M G PN T+ L+ L ++ + E+++ M Y +
Sbjct: 245 AIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLIN 304
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC + +A+ + ++M+ G PD+ Y +++ CA +A DE G+
Sbjct: 305 GLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGI 362
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVK 223
T +S +D L ++G +Q + E M R + + ++ LC+ G + E L +
Sbjct: 263 TYSSLMDGLCKSGHSSQAMELLEVMVRRR-LLPNMVTYSTLINGLCKEGKHREAVEILDR 321
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD----CVS 279
+ PD + +I G C EA EM GG ++ + V
Sbjct: 322 MRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQ 381
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC DP R A ++ L M G+ + TF+ L+ CK A ++ M
Sbjct: 382 GLCNNVDPTR----AFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILD 437
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMI 368
GC P+E + VL+ L+ +V E E++
Sbjct: 438 GCIPDEGMWNVLMCGLWDRKKVRETTELL 466
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 6/191 (3%)
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+EM G V+ N + + LC+ ++ A ++ +M G + T+ L
Sbjct: 144 KEMREKGIPPTVVSLNIL---IKALCKNEETVE---SAFRLFREMPNRGCQPDSYTYGTL 197
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK+ + A +L M E G P+ ++ LI L Q+ + E E+++ M G
Sbjct: 198 INGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGI 257
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + LC QAM + E M P+ TY L+ C + +A
Sbjct: 258 EPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVE 317
Query: 437 LFDEAVRNGVE 447
+ D G++
Sbjct: 318 ILDRMRLQGLK 328
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 30/310 (9%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
+ G+ Q + F +M R G D + V+ LC++G A + + +E + P +
Sbjct: 386 KQGKVDQAMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL--- 290
+ + LI C+ K D+AK L EM G L T+ +N I+D K R + +L
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 291 -------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
EA K+L M G+ + T+N LI+ CKI R
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
EDA+ LF M G P+ T+ ++++ L+Q R E+ + +G + Y
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L LC ++A+ +F+ + ++ T+++++ R D+A LF NG
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Query: 446 VEVKPKEYRV 455
+ + Y +
Sbjct: 685 LVPDVRTYSL 694
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 9/295 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V N + +T S + +G+P + +GF ++M D G + D + +++ LC+NG
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNG 318
Query: 214 YASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ A K+ T + P+ L++G+ G L E L M R G ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ C ++D +A V M G+ + T+ +I LCK R EDA++
Sbjct: 379 ILI------CAYAKQGKVD-QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F +M + P + LI SL + + E+I M G + + + C
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
R+ ++ +F+ M G PD TY L+ +C ++D+A L V G++
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 8/231 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLD 250
D G D +++ C+ G +EKL + PD LI G+C+ GK+D
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA +L M G + V YN +++ K+ R +D L E ME +GV ++
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE-------MESSGVSPDI 584
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N+++ L + RR+ A +L+ + E G +T+ +++ L + E M
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ + + + + L + R ++A +F + +G PD TY L+
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 16/249 (6%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++ + A+E+ P+ +LI C G+LD + + GF + +A+ +L
Sbjct: 78 RMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLL---K 134
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC K R + VL M G NV ++N+L+ LC RS++A++L M +
Sbjct: 135 GLCADK---RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191
Query: 340 G--CHPNETTFLVLIKSLYQAARV----GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
G C P+ ++ +I ++ + G EM+DR G Y + LC
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR----GILPNVVTYSSIIAALCKA 247
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +++AM V M +G P+ TY+ ++ +C+ + +A + +GVE Y
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307
Query: 454 RVDPRYLKK 462
YL K
Sbjct: 308 NSLMDYLCK 316
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 15/265 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV--KDTANEIFPDDKICDLLIKGWCVDGKLDE 251
GF+ D + +++ LC + S A +V + T P+ ++L+KG C + + E
Sbjct: 121 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQE 180
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR---LDSEAEKVLLDMEYNGVPR 308
A L + M G + C D VS F+ LD +A +M G+
Sbjct: 181 ALELLQMMPDDGGD-------CPPDVVSYTTVINGFFKEGDLD-KAYGTYHEMLDRGILP 232
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV T++ +I+ LCK + + A+++ M + G PN T+ ++ + + E +
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M S G Y + LC R +A +F+ M G P+ TY L+ +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
+ + + L D VRNG+ P Y
Sbjct: 353 GALVEMHGLLDLMVRNGIH--PNHY 375
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ID + GR + F+ M R G K D + +++ C G A KL+ +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD + LI G+C ++++A L REM G + YN IL + +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT----- 597
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + A+++ + + +G + T+N+++ LCK +++A+++F +
Sbjct: 598 --RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
TF ++I +L + R E ++ + + G
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + I+ + R L F ME G D + ++++ L + + A++L V
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESS-GVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T + + ++++ G C + DEA R+ + + +L T +N ++ + K+ R
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA+ + + NG+ +V T++++ NL + E+ LF M E GC
Sbjct: 670 -------NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722
Query: 344 NETTFLVLIKSLYQ---AARVGEGDEMID 369
N +++ L Q R G MID
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMID 751
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 127/313 (40%), Gaps = 36/313 (11%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D +AG + L E M R+ D + ++V LC G A L+++
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRE-NILPDVITYTILVNGLCRVGQVQVAFYLLEE 331
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + PD L+ G C G+++EA +L +EM G G V Y+ + VS CR
Sbjct: 332 IVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSL---VSGYCR 388
Query: 284 KKDPFRLD-------------------------------SEAEKVLLDMEYNGVPRNVET 312
+ + S+A ++ D+ G +V T
Sbjct: 389 AGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 448
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI LCK R +A L M GC PN+ T ++ L + RV + ++ M
Sbjct: 449 YNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 508
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+A Y + LC +R++ A V + M+ G D Y L+ RV
Sbjct: 509 RKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVA 568
Query: 433 KANALFDEAVRNG 445
+A A++DE V G
Sbjct: 569 EAMAMYDEMVARG 581
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 10/267 (3%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
R+ RP + FF+ G+K D S +++ L ++G+ K+ KD + P+
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+LI+G C G+ A R + +N + + L + +P +
Sbjct: 63 VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVL---IHGLFKDGNP----DQ 115
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG--CHPNETTFLVL 351
A K+ +ME + V + T+N +IS LCK E A +L M G P+ T+ L
Sbjct: 116 AVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTL 175
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + Y+A+R+ E ++MK+AG ++ +C +E+A+ + + MK G
Sbjct: 176 INAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGP 235
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALF 438
PD TY+ ++ C +V +A +
Sbjct: 236 VPDVITYNSIIHALCVAGKVVEAAEIL 262
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 116/311 (37%), Gaps = 49/311 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT---- 225
I L + G P Q + FE ME K + + V+ LC++G A +L+++
Sbjct: 104 IHGLFKDGNPDQAVKLFENMESSR-VKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKG 162
Query: 226 ----------------------------------ANEIFPDDKICDLLIKGWCVDGKLDE 251
A I PD C++L+ G C DG ++E
Sbjct: 163 GKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEE 222
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A + M G + YN I + LC EA ++L M ++
Sbjct: 223 ALEILDGMKLAGPVPDVITYNSI---IHALCVAGKVV----EAAEILKTMS---CSPDLV 272
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
TFN L+ CK A+++ M P+ T+ +L+ L + +V +++ +
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
GY Y + LC IE+A + ++M G Y L++ +C V
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV 392
Query: 432 DKANALFDEAV 442
KA + E V
Sbjct: 393 HKAREILAEMV 403
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 113/284 (39%), Gaps = 44/284 (15%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT---- 225
++ L R G+ E + R G+ D + +V+ LC++G A KLVK+
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQ-GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG 371
Query: 226 -----------------------ANEIF---------PDDKICDLLIKGWCVDGKLDEAK 253
A EI P ++++ G DG + +A
Sbjct: 372 CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV 431
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L ++ G+ V YN ++D + K R ++ L E M G N T
Sbjct: 432 SLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE-------MASRGCFPNDVTL 484
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
++ LC++ R +DA L M PN + LI L ++ R+ + ++D M+
Sbjct: 485 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRG 544
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
G A+ Y + + + R+ +AM+++++M G PD T
Sbjct: 545 QGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 27/322 (8%)
Query: 128 SHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFE 187
S D + FF D+ G + +K HD N +D LV++G + ++
Sbjct: 5 SRPDLAIQFF-DWAGEQDGYK--HDVHSYNH----------LLDILVKSGHHFRTGKVYK 51
Query: 188 RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVD 246
+ G + + ++++ C+ G A A + ++ + PD I ++LI G D
Sbjct: 52 DLLHS-GCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKD 110
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G D+A +L M + V YN + +S LC+ + +A ++L +M G
Sbjct: 111 GNPDQAVKLFENMESSRVKPEIVTYNTV---ISGLCKSGNL----EKARELLEEMIRKGG 163
Query: 307 PR--NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
++ T+N LI+ + R +A +M G +P+ T +L+ + + V E
Sbjct: 164 KSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEA 223
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E++D MK AG Y + LC ++ +A + + M +PD T++ L+
Sbjct: 224 LEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC---SPDLVTFNTLLDG 280
Query: 425 WCAHNRVDKANALFDEAVRNGV 446
+C + +A + +E R +
Sbjct: 281 FCKAGMLPRALEVLEEMCRENI 302
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
E +G +V ++N L+ L K K++ + GC PN TF +LI+ +A +
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI---EQAMSVFEKMKTDGHNPDSETY 418
E + + A D Y F + G+ + +QA+ +FE M++ P+ TY
Sbjct: 79 MRALEFLRALDEFSVA---PDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTY 135
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
+ +++ C ++KA L +E +R G + P
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAP 167
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 9/296 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ + GR + M G + ++ LC++G A +L + + +
Sbjct: 419 INGFCKQGRLEEAAEIVNSMSAK-GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
PD + LI G C + K++EA L +M+ G TV YN ++ +D
Sbjct: 478 CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAF----LMRDSI 533
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +A K++ +M + G P + T+N LI LCK E + LF M G P +
Sbjct: 534 Q---QAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISC 590
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + +V + + + M G Y + LC + +++A ++F K+++
Sbjct: 591 NILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQS 650
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPI 464
+G PD+ TY+ L+++ C + A L + V +G + + Y+ K I
Sbjct: 651 EGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKI 706
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 132/310 (42%), Gaps = 18/310 (5%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I L RAGR + +RM GF D + ++ LC G A L+
Sbjct: 276 QTFNDVIHGLCRAGRIHEAAKLLDRMLLR-GFSTDALTYGYLMHGLCRMGQVDEARALLN 334
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA-REMYRGGFELGTVAYNCILDCVSKLC 282
N P+ + + LI G+ G+ +EAK L M G+E +N ++D + K
Sbjct: 335 KIPN---PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKG 391
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
L +E M NV T+ +LI+ CK R E+A ++ M G
Sbjct: 392 YLVSALELLNE-------MVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLS 444
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQA 399
N + LI +L + + E ++ M G K D Y F + LC ++E+A
Sbjct: 445 LNTVGYNCLICALCKDGNIEEALQLFGEMSGKGC---KPDIYTFNSLINGLCKNHKMEEA 501
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
+S++ M +G ++ TY+ L+ + + + +A L DE + G + Y +
Sbjct: 502 LSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKA 561
Query: 460 LKKPIAVKKG 469
L K AV+KG
Sbjct: 562 LCKTGAVEKG 571
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 13/260 (5%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
F+R G+ D+ L+++KL G EKL+K +E + + + L++K +
Sbjct: 85 LFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHY 144
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTV--AYNCILDC-VSKLCRKKDPFRLDSEAEKVLLD 300
G +A RL +M+ G + +YN +LD V C + P V D
Sbjct: 145 GKAGLPGQATRLLLDMW-GVYSCDPTFKSYNVVLDILVDGDCPRVAP--------NVFYD 195
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M GV V TF V++ LC + + A L M + GC PN + LI +L + R
Sbjct: 196 MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNR 255
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E ++++ M + + + + LC RI +A + ++M G + D+ TY
Sbjct: 256 VSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315
Query: 421 LMTKWCAHNRVDKANALFDE 440
LM C +VD+A AL ++
Sbjct: 316 LMHGLCRMGQVDEARALLNK 335
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 138/334 (41%), Gaps = 16/334 (4%)
Query: 127 FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE--VLGPKTLASCIDR-LVRAGRPTQVL 183
+SHT + D G DFK I L K+ +L ++L I + +AG P Q
Sbjct: 95 YSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQAT 154
Query: 184 GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKG 242
M Y S +V++ L + A + D + + P +++K
Sbjct: 155 RLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKA 214
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
C+ ++D A L R+M + G +V Y + + LC SEA ++L DM
Sbjct: 215 LCMVSEVDSACSLLRDMAKHGCVPNSVIYQTL---IHALCENNRV----SEALQLLEDMF 267
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
+V+TFN +I LC+ R +A KL RM G + T+ L+ L + +V
Sbjct: 268 LMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVD 327
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS-VFEKMKTDGHNPDSETYDLL 421
E +++++ + + Y ++ R E+A ++ M G+ PD+ T++++
Sbjct: 328 EARALLNKIPNPNTVL----YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIM 383
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ + A L +E V E Y +
Sbjct: 384 IDGLVKKGYLVSALELLNEMVAKRFEPNVITYTI 417
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 11/278 (3%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDK 234
+G+P +G F+RM RD G + D + ++ LC+NG + A K+ P+
Sbjct: 286 SGKPNDAIGVFKRMCRD-GVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSA 344
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
L+ G+ +G L + L M R G + +N ++ +K + D L S+
Sbjct: 345 TYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSK- 403
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
M G+ + T+ +++ LC + + +DA+ F R+ G P+ F LI
Sbjct: 404 ------MRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHG 457
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + + +E+ M G + L LC + +A ++F+ M D
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD 517
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
TY+ L+ +C H +VD+A L + V +G VKP E
Sbjct: 518 VITYNTLIDGYCLHGKVDEAAKLLEGMVLDG--VKPNE 553
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 11/292 (3%)
Query: 158 KEVLGPKTLASCI--DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
++ L P T+ I D L G+ + F R+ + G D R ++ LC
Sbjct: 406 RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE-GLTPDAVVFRNLIHGLCARDKW 464
Query: 216 SYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
AE+L V+ I P++ + L+ C +G + AK + M R + + YN +
Sbjct: 465 DKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTL 524
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+D L K D EA K+L M +GV N T+N +I+ CK R EDA LF
Sbjct: 525 IDGYC-LHGKVD------EAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFR 577
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
+M G +P T+ +++ L+QA R E+ M +G Y L LC
Sbjct: 578 QMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNN 637
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ A+ +F+ + + ++ T+++++ R D+A LF + G+
Sbjct: 638 CTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGL 689
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 13/221 (5%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMY-----RGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+L+KG C + + +A L M RGG+ V+YN +++ + + R+ D
Sbjct: 167 ILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLD------ 220
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
A + M G+ +V T+N +IS L K R + A + RM + G PN T L+
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ + + + RM G Y + LC R +A +F+ M GH
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+S TY L+ + + K + L D VRNG++ P Y
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ--PDHY 379
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 110/262 (41%), Gaps = 14/262 (5%)
Query: 201 SLRLVVEKLCENGYASYAEKL-----VKDTANEIFPDDKIC-DLLIKGWCVDGK-LDEAK 253
S ++++ LC+ + A L V D +P D + + +I G +G+ LD A
Sbjct: 164 SYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAY 223
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
L +M G V YN I+ +SK R D +A VL+ M NG N T
Sbjct: 224 HLFDQMLDQGLSPDVVTYNSIISALSK-ARAMD------KAAVVLVRMVKNGAMPNRITH 276
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N L+ C + DAI +F RM G P+ T+ L+ L + R E ++ D M
Sbjct: 277 NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G+ Y L + + + + M +G PD +++L+ + H +VD
Sbjct: 337 RGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDD 396
Query: 434 ANALFDEAVRNGVEVKPKEYRV 455
A LF + R G+ Y +
Sbjct: 397 AMLLFSKMRRQGLNPDTVTYGI 418
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 128/278 (46%), Gaps = 9/278 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA- 226
+ ++ L + G + F+ M R +RD + +++ C +G A KL++
Sbjct: 488 TLLNHLCKEGMVARAKNIFDLMVR-VDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVL 546
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ + P++ + +I G+C +G++++A L R+M G G V Y+ IL + +
Sbjct: 547 DGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQA----- 601
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + A+++ L M +G+ ++ T+N+++ LC+ ++DA+++F + H
Sbjct: 602 --RRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENR 659
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
TF ++I +L + R E ++ + + G Y+ + L +E+ +F +
Sbjct: 660 TFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSL 719
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ +G +S + L+ K V KA + N
Sbjct: 720 EKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDEN 757
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 12/222 (5%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G LD A + R G+ + ++ +L LC KK R + L M G
Sbjct: 105 GHLDLAFAALGRVIRSGWTAEAITFSPLL---KALCDKK---RTSEAMDIALRRMPVLGC 158
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRM-----GEWGCHPNETTFLVLIKSLYQAAR- 360
NV ++ +L+ LC RS+ A+ L + M G P+ ++ +I L + R
Sbjct: 159 TPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQ 218
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + D+M G + Y ++ L +++A V +M +G P+ T++
Sbjct: 219 LDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNS 278
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
L+ +C+ + + A +F R+GVE Y YL K
Sbjct: 279 LLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCK 320
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V YN + +S LC+ + SEA +L +M Y+G ++ T+ LI+ CK ++S+D
Sbjct: 55 VTYNSL---ISGLCKAERA----SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDD 107
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI-GKKDYYEFL 387
A+++F ++ G P+ T+ LI L + R+ E ++ RM +G + Y +
Sbjct: 108 ALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 167
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ C + ++++AM++ E+M G +PD TY LM +C R+D A L ++ R G+
Sbjct: 168 SGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 226
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 7/237 (2%)
Query: 205 VVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC+ AS A L+++ + PD LI G+C K D+A R+ ++ G
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 119
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F V Y+C++D + K R K+ L K M N T+N LIS C++
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP------NTVTYNSLISGFCRM 173
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ ++A+ L RM E G P+ T+ L+ + AR+ + +++++M G +
Sbjct: 174 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTF 233
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ LC R+ A+ + +M+ +P TY+ ++ +C N++++A E
Sbjct: 234 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 16/278 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I ++ + L FE++ GF+ D + +++ LC+ G A L
Sbjct: 91 TYTTLITGFCKSKKSDDALRVFEQLVAR-GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGR 149
Query: 225 T--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ P+ + LI G+C GK+DEA L M G V Y +++ KL
Sbjct: 150 MIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLA 209
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R D + L L M G+ NV TF L+ LC+ R DA+ + M C
Sbjct: 210 RLDDAYDL-------LNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS 262
Query: 343 PNETTFLVLIKSLYQAARVGEGDE-MIDRMKSAGYAIGKKDYYEFLTR-LCGIERIEQAM 400
P T+ ++ + ++ E + M++ M + + + R LC + R +AM
Sbjct: 263 PTVYTYNTILDGYCRVNQLEEARKFMLEEMDCPPNVVS----FNIMIRGLCKVNRSSEAM 318
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ E+ + NPD Y ++ C +VD+A ++
Sbjct: 319 ELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVY 356
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 8/206 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G C + EA L EM G Y + ++ C+ K +A +V
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTL---ITGFCKSKK----SDDALRVF 112
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKSLYQ 357
+ G +V T++ LI LCK R ++AI LF RM + G C PN T+ LI +
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
++ E +++RM G + Y + C + R++ A + +M G P+ T
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVR 443
+ LM C NR+ A + E R
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEMRR 258
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 27/234 (11%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + GR + + F RM + + + ++ C G A L++
Sbjct: 126 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 185
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A PD L+ G+C +LD+A L +M R G V + ++D + + R
Sbjct: 186 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENR 245
Query: 284 KKDPFRLDSEAEK-----------VLLD---------------MEYNGVPRNVETFNVLI 317
D + E + +LD +E P NV +FN++I
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCPPNVVSFNIMI 305
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
LCK+ RS +A++L C+P+ + +I L + +V E + +M
Sbjct: 306 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKM 359
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P T+ LI L +A R E ++++ M +G Y +T C ++ + A+ V
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
FE++ G PD TY L+ C R+ +A LF +++G
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 154
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G D + +V+ L +N A L+ K TAN P + L+ G C G+L+EA
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L R++ G V Y ++D + K +K F EA K+ +M G+ +
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGK---EKRSF----EAYKLFKEMALRGLALDTVC 374
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ LI L + + A ++ M GC P+ T +I L +A R+G + M+
Sbjct: 375 YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 434
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G A + Y + LC +++ A+ + +MK PD+ TY++L+ C V+
Sbjct: 435 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 494
Query: 433 KANALFDEAVRNGVEVKPKEY 453
A A FDE + G KP Y
Sbjct: 495 AARAFFDEMLEAG--CKPDVY 513
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
K TAN P + L+ G C G+L+EA L R++ G V Y ++D + K
Sbjct: 11 KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK-- 68
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+K F EA K+ +M G+ + + LI L + + A ++ M GC
Sbjct: 69 -EKRSF----EAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T +I L +A R+G + M++ G A + Y + LC +++ A+ +
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+MK PD+ TY++L+ C V+ A A FDE + G KP Y
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG--CKPDVY 232
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 128/294 (43%), Gaps = 12/294 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I L++ G+ Q ++ M +G D +L +++ L + G A ++ K A
Sbjct: 98 IRELLQTGKIPQASSVYKTMT-SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 156
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P++ + LI G C K+D A + +M + T+ YN ++D LC+ D
Sbjct: 157 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLID---GLCKSGDV- 212
Query: 289 RLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAI-KLFYRMGEWGCHPNET 346
EA + D M G +V T+N+LIS CK ++ A L GC +
Sbjct: 213 ----EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIH 268
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ ++ L + ++ E +++++ + G Y L LC + R+E+A+ + K+
Sbjct: 269 TYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 328
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
+G PD TY L+ R +A LF E G+ + Y R L
Sbjct: 329 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIREL 382
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 8/282 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVK 223
TL++ ID L +AGR + F+ ME G ++ ++ LC+ A E L +
Sbjct: 128 TLSTMIDGLSKAGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDCALEMLAQ 186
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD ++LI G C G ++ A+ EM G + YN + +S C+
Sbjct: 187 MKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL---ISGFCK 243
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ D+ + + + NG ++ T+ ++ L K ++ E+A+ L ++ GC P
Sbjct: 244 AGNT---DAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ L+ L + R+ E +++ ++ G Y + L +R +A +F
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++M G D+ Y L+ + ++ +A++++ +G
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 21/331 (6%)
Query: 118 NHWLTQNANFSHTD---ETLSFFTDYFGRRKDFK---AIHDFLVDNKEVLGPKTLASCID 171
+H L Q + T + D+ + K + A+ + + N T + ++
Sbjct: 251 SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLN 310
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP 231
L + GR + + ++ D G D + +++ L + + A KL K+ A
Sbjct: 311 GLCKMGRLEEAIDLLRKI-VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLA 369
Query: 232 DDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
D +C LI+ GK+ +A + + M G V + ++D +SK R R
Sbjct: 370 LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR- 428
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+ ME G+ N ++ LI LCK R+ + A+++ +M + C P+ T+ +
Sbjct: 429 ------IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 482
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMK 407
LI L ++ V D M AG K D Y + ++ C + A VF+ M
Sbjct: 483 LIDGLCKSGDVEAARAFFDEMLEAGC---KPDVYTYNILISGFCKAGNTDAACGVFDDMS 539
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ + + TY L++ C ++ KA+ F
Sbjct: 540 SSRCSANVVTYGALISGLCKRRQLTKASLYF 570
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA ++ + NG + T+N L++ LCK+ R E+AI L ++ + GC P+ T+ LI
Sbjct: 4 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 63
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L + R E ++ M G A+ Y + L +I QA SV++ M + G
Sbjct: 64 DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123
Query: 413 PDSETYDLLMTKWCAHNRVDKANALF 438
PD T ++ R+ A +F
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIF 149
>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 9/287 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKI 235
G Q + F++ R+ G + ++VE +C ++ A +++D A E +PD
Sbjct: 219 GNAEQAIRFWKDQLRN-GCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVT 277
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ L+ C G L+E + + + G EL TV YN +L LC + E E
Sbjct: 278 YNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLL---HSLCSNE----YWDEVE 330
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++L M V T+N+LI+ LCK R AI FY+M E C P+ T+ L+ ++
Sbjct: 331 EILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAM 390
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ V + E++ +KS G Y + L +++A+ ++ M G +PD
Sbjct: 391 SKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDD 450
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
T L+ +C N V++A+ + E G ++ YR+ + L K
Sbjct: 451 ITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCK 497
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 110/262 (41%), Gaps = 49/262 (18%)
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLVKDTA--NEI--FPDDKICDLLIKGWCVDGKLDE 251
+ D+++ ++ LC NG + A KLV+ A N++ FP C L++G +LD+
Sbjct: 97 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPS---CSNLVRGLARIDQLDK 153
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A + R M G T+ YN I + LC KK R A +L DM +G P +V
Sbjct: 154 AMVILRIMVMSGGVPDTITYNMI---IGNLC-KKGHIR---SALVLLEDMSLSGSPPDVI 206
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N +I + +E AI+ + GC P T+ VL+
Sbjct: 207 TYNTVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLV------------------- 247
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
E + R CG R AM V E M +G PD TY+ L+ C +
Sbjct: 248 -------------ELVCRYCGSAR---AMDVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 291
Query: 432 DKANALFDEAVRNGVEVKPKEY 453
++ + + +G+E+ Y
Sbjct: 292 EEVALVIQHILSHGLELNTVTY 313
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 8/227 (3%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDE 251
+G + + + ++ LC N Y E+++ + P ++LI G C L
Sbjct: 304 HGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSR 363
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A +M V YN +L +SK +D E + L + +P +
Sbjct: 364 AIDFFYQMLEQKCLPDIVTYNTLLGAMSK------EGMVDDAIELLGLLKSTSCLP-GLI 416
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+N +I L + + A++L++ M + G P++ T LI +A V E +++
Sbjct: 417 TYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKET 476
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ G I Y + LC +E A+ V E M T G PD Y
Sbjct: 477 SNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIY 523
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 44/289 (15%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDE 251
GF D + +V LC+ A +L+ D + + + + LI G+C G++D+
Sbjct: 179 GFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDK 238
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV----- 306
A+ + M R G E V YN L+ C D LD +A+K+L ME +G+
Sbjct: 239 AQAIKSFMRRNGCEPDLVTYNVFLN---YFC---DELMLD-DAKKLLKLMERSGIEPDVY 291
Query: 307 ---------------------------PR---NVETFNVLISNLCKIRRSEDAIKLFYRM 336
P+ +V ++N +I CKI + A KLF M
Sbjct: 292 SYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEM 351
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
G+ G P+ TF + IK+ +++D+M G + Y + LC ++
Sbjct: 352 GQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKV 411
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
E A S+F M G +PD +++ L+ +C +RV +A L++E G
Sbjct: 412 EMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRG 460
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 23/341 (6%)
Query: 118 NHWLTQNA--NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLG--PKTLASCI--D 171
NH+ +Q FS + T S F + K+F I + L D E L P A I
Sbjct: 64 NHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHD-METLNCLPDIWAFNIYLH 122
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF- 230
L GR L FE++ ++ G K D + +++ +C+ A + +D ++ F
Sbjct: 123 LLFVEGRIDLALEVFEKIVKN-GRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFS 181
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG-FELGTVAYNCILDCVSKLCRKKDPFR 289
PD+K C ++ G C K+D A L ++ + G +L T+ YN + +S CR R
Sbjct: 182 PDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNAL---ISGFCRAG---R 235
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+D +A+ + M NG ++ T+NV ++ C +DA KL M G P+ ++
Sbjct: 236 ID-KAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYN 294
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD---YYEFLTRLCGIERIEQAMSVFEKM 406
L+K + + D+ M + + G D Y + C I A +FE+M
Sbjct: 295 QLLKGICKG---NCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEM 351
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G PD T+ + + + + A L D+ G+
Sbjct: 352 GQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLS 392
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLA 256
D S +++ C+ G + A KL ++ + P D + + IK + G + AK+L
Sbjct: 324 DVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLL 383
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+M G + Y I+D LC+ A + DM G+ +V +FN L
Sbjct: 384 DQMTEMGLSPDCIFYTTIID---HLCKSGKV----EMAHSIFCDMVEQGISPDVISFNAL 436
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ CK R +A+ L+ M G +P+E T+ ++I L + ++ + +M G+
Sbjct: 437 INGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGF 496
Query: 377 AI 378
+
Sbjct: 497 TL 498
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
+ D A +M GF L + Y+ ++ LC+ K+ +D ++L DME
Sbjct: 59 RFDLANHYYSQMGTRGFSLSSFTYS---RFITGLCKVKNFTFID----ELLHDMETLNCL 111
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ FN+ + L R + A+++F ++ + G P+ T+ ++I + + + +
Sbjct: 112 PDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQF 171
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS-VFEKMKTDGHNPDSETYDLLMTKWC 426
M G++ K + LC +++ A + + MK+ + Y+ L++ +C
Sbjct: 172 WRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFC 231
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEK 478
R+DKA A+ RNG E Y V Y + + KK L E+
Sbjct: 232 RAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMER 283
>gi|297842697|ref|XP_002889230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335071|gb|EFH65489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 580
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 14/284 (4%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L +A R + + E M G D + +V +LC+ G YA +LV+ + FP
Sbjct: 119 LCKANRLKKAIRVIELMVSS-GIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGFPS 177
Query: 233 DKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ + + L++G C+ G L+++ + + + G Y+ +L+ K R
Sbjct: 178 NTVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLEAAYKE-------RGT 230
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+A K+L ++ G N+ ++NVL++ CK R++DA+KLF + G N ++ +L
Sbjct: 231 DQAVKLLDEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNIL 290
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
++ L R E + ++ M A Y + L R EQAM V ++M H
Sbjct: 291 LRCLCCDGRWDEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMSKGHH 350
Query: 412 NP---DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
+ + +Y+ ++ + C +VD DE + KP E
Sbjct: 351 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYR--RCKPNE 392
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 10/225 (4%)
Query: 216 SYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
S+ E LV D P+ L+ C +L +A R+ M G AY +
Sbjct: 95 SHLECLVTDGHK---PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL- 150
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
V++LC++ + A +++ ME +G P N T+N L+ LC + +++ R
Sbjct: 151 --VNQLCKRGNV----GYAMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVER 204
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
+ + G PN T+ L+++ Y+ + +++D + + G Y LT C R
Sbjct: 205 LMQRGLAPNAFTYSFLLEAAYKERGTDQAVKLLDEIIAKGGQPNLVSYNVLLTGFCKEGR 264
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ AM +F ++ G + +Y++L+ C R D+AN+L E
Sbjct: 265 TDDAMKLFRELPVKGFKANVVSYNILLRCLCCDGRWDEANSLLAE 309
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 5/227 (2%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREM 259
S +++ C+ G A KL ++ + F + + ++L++ C DG+ DEA L EM
Sbjct: 251 SYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCDGRWDEANSLLAEM 310
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G V YN +++ ++ R + ++ E K ++ ++N +I+
Sbjct: 311 DGGDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMSK----GHHHQFRVTATSYNPVIAR 366
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LCK + + +K M C PNE T+ + +V E +I + +
Sbjct: 367 LCKEGKVDLVVKCLDEMIYRRCKPNEGTYSAIGALCEHNGKVQEAFYIIQSLSNKQKCCT 426
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
Y +T +C A + +M G +PD+ TY L+ C
Sbjct: 427 HDFYKSVITSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLC 473
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G NV L+ +LCK R + AI++ M G P+ + + L+ L + VG
Sbjct: 103 DGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGY 162
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+++++M+ G+ Y + LC + + Q++ E++ G P++ TY L+
Sbjct: 163 AMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLE 222
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
D+A L DE + G + Y V
Sbjct: 223 AAYKERGTDQAVKLLDEIIAKGGQPNLVSYNV 254
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A +V+ M +G+ + + L++ LCK A++L +M + G N T+ L+
Sbjct: 127 KAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGFPSNTVTYNALV 186
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER-IEQAMSVFEKMKTDGH 411
+ L + + + ++R+ G A Y FL ER +QA+ + +++ G
Sbjct: 187 RGLCMLGSLNQSLQFVERLMQRGLAPNAFT-YSFLLEAAYKERGTDQAVKLLDEIIAKGG 245
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
P+ +Y++L+T +C R D A LF E G + Y + R L
Sbjct: 246 QPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCL 294
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-NGYASYAEKLVKDTANE 228
I RL + G+ V+ + M Y + + + LCE NG A +++ +N+
Sbjct: 364 IARLCKEGKVDLVVKCLDEM--IYRRCKPNEGTYSAIGALCEHNGKVQEAFYIIQSLSNK 421
Query: 229 IFPDDKICD-----LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
K C +I C G A +L EM R GF+ Y+ + + LC
Sbjct: 422 ----QKCCTHDFYKSVITSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSAL---IRGLCL 474
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ F E ++ + EY+ V+ FN +I LCKIRR++ A+++F M P
Sbjct: 475 E-GMFIGAMEVLSIMEESEYH--KPTVDNFNAMILGLCKIRRTDLALEVFEMMVGKKRMP 531
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
NETT+ ++++ + + E+++ ++S
Sbjct: 532 NETTYAIIVEGIAHEDELELAKEVLEELRS 561
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 120/304 (39%), Gaps = 44/304 (14%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDD 233
+ GR + F + GFK + S +++ LC +G A L+ + + P
Sbjct: 261 KEGRTDDAMKLFRELPVK-GFKANVVSYNILLRCLCCDGRWDEANSLLAEMDGGDRAPSV 319
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRG---GFELGTVAYNCILDCVSKLC-------- 282
++LI G+ ++A ++ +EM +G F + +YN + +++LC
Sbjct: 320 VTYNILINSLAFHGRTEQAMQVLKEMSKGHHHQFRVTATSYNPV---IARLCKEGKVDLV 376
Query: 283 ---------RKKDPFRLDSEAEKVLLDMEYNGVPRNV----------------ETFNVLI 317
R+ P A L E+NG + + + +I
Sbjct: 377 VKCLDEMIYRRCKPNEGTYSAIGALC--EHNGKVQEAFYIIQSLSNKQKCCTHDFYKSVI 434
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+++C+ + A +L Y M G P+ T+ LI+ L E++ M+ + Y
Sbjct: 435 TSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFIGAMEVLSIMEESEYH 494
Query: 378 IGKKDYYE-FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
D + + LC I R + A+ VFE M P+ TY +++ + ++ A
Sbjct: 495 KPTVDNFNAMILGLCKIRRTDLALEVFEMMVGKKRMPNETTYAIIVEGIAHEDELELAKE 554
Query: 437 LFDE 440
+ +E
Sbjct: 555 VLEE 558
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 133/300 (44%), Gaps = 9/300 (3%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
I D V+ G T + I L AG+ T+ +F +M +D G + S +V++
Sbjct: 414 ILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKD-GLLCNVCSYNMVIDCF 472
Query: 210 CENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ A K+ + P + + + LI G+C G++ +++ L + GF+
Sbjct: 473 CKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDI 532
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
++ I+D LCR K +A +M G+ N T+N+LI +LC I
Sbjct: 533 FTFSSIID---GLCRAKQI----EDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPR 585
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
++KL +M G +P+ +F LI+S + +V + ++ M S G Y F+
Sbjct: 586 SMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIK 645
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
C R +A +F M+ +G PDS T ++++ ++ + A + G+ V
Sbjct: 646 VFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILV 705
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 128/312 (41%), Gaps = 44/312 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID LV++ F++M D K D+ + +++ +C +G A +LVK
Sbjct: 224 IDALVKSNSLDLAYLKFQQMSAD-NCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLG 282
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREM-------------------YRG-----GF 264
+ P+ +LI G+ K+DEA R+ M +R F
Sbjct: 283 YSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAF 342
Query: 265 ELGT-----------VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
EL +A + +L C+S K+ R EA +L G + TF
Sbjct: 343 ELAIEFIEREPVLQRLACDTLLCCLSS----KNMAR---EAGALLKKFGKIGHKPDSATF 395
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N+ ++ L K + + R E G +T+L LIK+LY A +V EG+ ++M
Sbjct: 396 NIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVK 455
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G Y + C +++A + F++M+ G P+ T++ L+ +C + K
Sbjct: 456 DGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICK 515
Query: 434 ANALFDEAVRNG 445
+ L + +G
Sbjct: 516 SRDLLVMLLEHG 527
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 101/255 (39%), Gaps = 28/255 (10%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
K + +A+ PD ++LI G C G +DEA RL ++M G+ Y ++D
Sbjct: 239 KFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFF 298
Query: 280 KLCRKKDPFRL--DSEAEKV-----LLDMEYNGVPRNVE--------------------- 311
+ + FR+ +A KV + +GV R V
Sbjct: 299 NAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRL 358
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+ L+ L + +A L + G+ G P+ TF + + L + + E ++DR
Sbjct: 359 ACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRF 418
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G G Y + L ++ + F +M DG + +Y++++ +C + +
Sbjct: 419 VEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMM 478
Query: 432 DKANALFDEAVRNGV 446
DKA F E G+
Sbjct: 479 DKATNTFKEMQYKGI 493
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 55/124 (44%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+++ + + G+ + +N +I L K + A F +M C P+ T+ +LI
Sbjct: 201 CDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIH 260
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ ++ V E ++ +M+ GY+ Y + +++++A V E MK +P
Sbjct: 261 GVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSP 320
Query: 414 DSET 417
T
Sbjct: 321 SEAT 324
>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 155/352 (44%), Gaps = 28/352 (7%)
Query: 90 FSHVTPTP----------SLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTD 139
F TP P S V TL+ + L F +W+ + F HT ET + D
Sbjct: 29 FHSRTPNPPQSDPLNLDSSTVFQTLSCYNNDWKRALDFFNWVETESQFQHTTETYNRMID 88
Query: 140 YFGRRKDFKAIHDFL--VDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGF 195
G+ +F D + + N P T R + A + + +E +++G
Sbjct: 89 ILGKFFEFDLSWDLIQRMRNNPFSTPNHTTFRVLFHRYISAHLVNEAVSVYEDRLKEFGL 148
Query: 196 KRDKDSLRLVVEKLCENGYASYAEKLV---KDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
K D+ S ++V+ LCE + A +L + + + KI +++++GW G +
Sbjct: 149 K-DETSYCILVDALCEYKHVIEAHELCFGNNNNSINVRNITKIYNMILRGWFKMGWWGKC 207
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ EM R +Y+ +D LC+ P++ A K+ +M+ G+ +V
Sbjct: 208 REFWEEMDRKEVCKDLHSYSIYMDI---LCKSGKPWK----AVKLYKEMKSKGIKLDVVA 260
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +I+ + + ++++ M E GC PN T +IK L + R+ E +M+D M
Sbjct: 261 YNTVINAIGLSEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCENGRIKEAYKMLDEMP 320
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ A Y+ F L E+ ++ + +F++M +G P +TY +LM K
Sbjct: 321 QSYIAPDVFTYHCFFRCL---EKPKEILCLFDQMIENGVCPRMDTYVMLMRK 369
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 9/293 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ PD +I G+C +G +DEA L
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G + T++Y +L + R D AE ++ M G P N TFN L
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVD-------AEDLMSQMIQQGCPLNPITFNTL 478
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ LCK E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y + L RI + + +F+ ++ D+ Y+ +++ C ++A
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET-LPEKMARKRRRLKQ 488
V +G Y + R L VK+ ++ T L K A ++ +K
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 651
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 9/274 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L GR L + M R G +++E C G A ++++D A
Sbjct: 132 LCARGRIADALAVLDEMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCAL 190
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D C+L++ C G +DEA L R++ G E V+YN +L LC K R
Sbjct: 191 DVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL---KGLCMAK---RWG 244
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
++++ +M P N+ TFN LIS LC+ E ++ +M E GC P+ + +
Sbjct: 245 C-VQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 303
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + + + E+++RM S G Y L LC ER E+ + +M
Sbjct: 304 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
D T+++L+ +C + VD+ L ++ + G
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 8/242 (3%)
Query: 205 VVEKLCENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC NG + E L + + PD ++ +I G C +G L+ A + M G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 327
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V YN +L LC + R + E E++L +M P + TFN+L+ C+
Sbjct: 328 LKPNVVCYNTLL---KGLCSAE---RWE-ETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ I+L +M E GC P+ T+ +I + + E ++ M + G Y
Sbjct: 381 GLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
L LC ER A + +M G + T++ L+ C V++A L + +
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500
Query: 444 NG 445
NG
Sbjct: 501 NG 502
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 116/301 (38%), Gaps = 35/301 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G D + LV+ +C+ G A L++D + PD + ++KG C+ +
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE------------------- 293
+ L EM R V +N + +S LCR R+
Sbjct: 247 QELMEEMVRMACPPNIVTFNTL---ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 303
Query: 294 ------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
A ++L M G+ NV +N L+ LC R E+ +L M + C
Sbjct: 304 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
++ TF +L+ Q V E++++M G Y + C I++A+
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVM 423
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ + M G P++ +Y +++ C+ R A L + ++ G + P + +L
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483
Query: 462 K 462
K
Sbjct: 484 K 484
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 60/138 (43%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
VP N T+ ++ LC R DA+ + M GC P + V++++ +
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
+++ + + G A+ + L +C +++A+ + + + G PD +Y+ ++
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 426 CAHNRVDKANALFDEAVR 443
C R L +E VR
Sbjct: 238 CMAKRWGCVQELMEEMVR 255
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +++ C+ + E A +L + PN T+ ++++L R+ + ++D M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPV---PPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G A Y+ L C A+ V E + G D +L++ C VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 433 KANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
+A L + G E Y LK K+ + L E+M R
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNA---VLKGLCMAKRWGCVQELMEEMVR 255
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 12/282 (4%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD- 224
L +C L R VL ++ G + + ++ LC+ G + A +L D
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKL----GLQPTIVTFTTLINWLCKVGKFAQAMELFDDM 194
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
A PD +I G C G+ A L ++M G + V Y+ I+D +
Sbjct: 195 VARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIID-----SHR 249
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
KD R +EA + M+ G+ ++ T+N LI LC + ++A L M P+
Sbjct: 250 KD--RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD 307
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
TF VL+ ++ + +V E ++ M G Y + + +A +F+
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFD 367
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M T G PD +Y++L+ +C R+D+A LF+E + G+
Sbjct: 368 AMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL 409
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 15/293 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID + R + L F M+ G D + +++ LC A L+ +
Sbjct: 240 TYSTIIDSHRKDRRVNEALDIFSYMKVK-GISPDIFTYNSLIQGLCNFSQWKEASALLNE 298
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I PD ++L+ C +GK+ EA+ + + M G E V Y+ ++
Sbjct: 299 MRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMY------- 351
Query: 284 KKDPFRLDSE---AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ L SE A K+ M G +V ++N+LI+ CK++R ++A +LF M G
Sbjct: 352 ---GYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN ++ LI L Q + E + M + G Y L C +A
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAF 468
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+F M++ P+ Y++L+ C + A LF E G++ + Y
Sbjct: 469 RLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIY 521
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++LI G+C ++DEAK+L EM G V+YN ++ + +L +
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR----- 430
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA + +M NG N+ T+++L+ CK A +LF M PN + +
Sbjct: 431 --EARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI ++ ++ + + ++ + G + Y + LC +++A+ F M+ DG
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
PD +Y++++ + H +A L E
Sbjct: 549 CPPDEISYNVIIRGFLHHKDESRAVQLIGE 578
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ +LI + ++D A + ++ + G + V + +++ + K+ +
Sbjct: 131 PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKF------ 184
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
++A ++ DM G +V T+ +I+ LCKI + A L +M E GC PN T+
Sbjct: 185 -AQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYST 243
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I S + RV E ++ MK G + Y + LC + ++A ++ +M++
Sbjct: 244 IIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLN 303
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PD T+++L+ C +V +A + GVE
Sbjct: 304 IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVE 340
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 8/269 (2%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKL 249
R D + ++V+ +C+ G S A+ ++K T + PD L+ G+ + ++
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
EA++L M G + +YN + ++ C+ K R+D EA+++ +M + G+ N
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNIL---INGYCKVK---RID-EAKQLFNEMIHQGLTPN 412
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
++N LI LC++ +A LF M G PN T+ +L+ + G+ +
Sbjct: 413 NVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFR 472
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M+S Y + +C + A +F ++ G P+++ Y ++ C
Sbjct: 473 AMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEG 532
Query: 430 RVDKANALFDEAVRNGVEVKPKEYRVDPR 458
+D+A F +G Y V R
Sbjct: 533 LLDEALEAFRNMEEDGCPPDEISYNVIIR 561
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI C GK +A L +M G Y I ++ LC+ + + A +L
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTI---INGLCKIGET----AAAAGLL 226
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME G NV T++ +I + K RR +A+ +F M G P+ T+ LI+ L
Sbjct: 227 KKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNF 286
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ E +++ M+S + + +C ++ +A V + M G PD TY
Sbjct: 287 SQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTY 346
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
LM + + V +A LFD + G + Y +
Sbjct: 347 SSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNI 383
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + S ++ LC+ G A L K+ N P+ +L+ G+C G +A
Sbjct: 408 GLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKA 467
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
RL R M + V YN ++D + K +D +L SE + G+ N +
Sbjct: 468 FRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSE-------LFVKGLQPNAQI 520
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +I+ LCK ++A++ F M E GC P+E ++ V+I+ ++I M+
Sbjct: 521 YTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMR 580
Query: 373 SAGY 376
G+
Sbjct: 581 DKGF 584
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ N+ T ++LI+ ++R + A + ++ + G P TF LI L + +
Sbjct: 124 MELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGK 183
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E+ D M + G Y + LC I A + +KM+ G P+ TY
Sbjct: 184 FAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYST 243
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
++ RV++A +F G+
Sbjct: 244 IIDSHRKDRRVNEALDIFSYMKVKGIS 270
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
Query: 313 FNVLISNLCKIRRSED-AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
F L+S + K+ + D I L +M G PN T +LI RV ++ ++
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKI 159
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G + + LC + + QAM +F+ M G PD TY ++ C
Sbjct: 160 IKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGET 219
Query: 432 DKANALFDEAVRNGVE 447
A L + G +
Sbjct: 220 AAAAGLLKKMEEAGCQ 235
>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 738
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 25/367 (6%)
Query: 97 PSLVQSTLN--FSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL 154
PSLV + L+ SPE L F W+ + F+HT ET GR L
Sbjct: 86 PSLVYNVLHGAASPEHA---LQFYRWVERAGLFTHTPETTLKIVQILGRYSKLNHARCIL 142
Query: 155 VDN------KEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
D+ + + S ID RAG + + F++M ++ G R S + +
Sbjct: 143 FDDTRGGASRATVTEDAFVSLIDSYGRAGIVQESVKLFKKM-KELGVDRTVKSYDALFKV 201
Query: 209 LCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
+ G A++ NE + P ++L+ G + +LD A R +M G
Sbjct: 202 ILRRGRYMMAKRYYNAMLNESVEPTRHTYNILLWGMFLSLRLDTAVRFYEDMKSRGILPD 261
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V YN +++ + F+ EAEK+ ++M+ + NV +F ++ + +
Sbjct: 262 VVTYNTLINGYFR-------FKKVEEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGQID 314
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
DA+K+F M G PN TF L+ L A ++ E +++ M I KD F+
Sbjct: 315 DALKVFEEMKGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEM--VERYIAPKDNAVFM 372
Query: 388 TRL---CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ C ++ A V + M ++ Y +L+ +C N DKA L D+ +
Sbjct: 373 KLMSCQCKAGDLDAAGDVLKAMIRLSIPTEAGHYGVLIENFCKANLYDKAEKLLDKMIEK 432
Query: 445 GVEVKPK 451
+ ++ K
Sbjct: 433 EIVLRQK 439
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 6/234 (2%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
KL+ A+ + + RGG TV + + + R + E+ K+ M+ GV
Sbjct: 134 KLNHARCILFDDTRGGASRATVTEDAFVSLIDSYGRAG----IVQESVKLFKKMKELGVD 189
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
R V++++ L + + R A + + M P T+ +L+ ++ + R+
Sbjct: 190 RTVKSYDALFKVILRRGRYMMAKRYYNAMLNESVEPTRHTYNILLWGMFLSLRLDTAVRF 249
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ MKS G Y + +++E+A +F +MK P+ ++ ++ + A
Sbjct: 250 YEDMKSRGILPDVVTYNTLINGYFRFKKVEEAEKLFVEMKGRDIVPNVISFTTMLKGYVA 309
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
++D A +F+E G VKP A K + R+ L E + R
Sbjct: 310 AGQIDDALKVFEEM--KGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEMVER 361
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 107/283 (37%), Gaps = 12/283 (4%)
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPD 232
V AG+ L FE M + G K + + ++ LC+ + A ++ + I P
Sbjct: 308 VAAGQIDDALKVFEEM-KGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPK 366
Query: 233 DKICDL-LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKLCRKKDPFR 289
D + L+ C G LD A + + M R Y +++ C + L K +
Sbjct: 367 DNAVFMKLMSCQCKAGDLDAAGDVLKAMIRLSIPTEAGHYGVLIENFCKANLYDKAEKL- 425
Query: 290 LDSEAEKVLLDMEYNGVPRNV-----ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
LD EK ++ + N + +N++I LC+ R+ A F ++ + G +
Sbjct: 426 LDKMIEKEIVLRQKNAYETELFEMEPSAYNLMIGYLCEHGRTGKAETFFRQLMKKGVQ-D 484
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+F LI + E+I M G A Y + A + +
Sbjct: 485 SVSFNNLICGHSKEGNPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALD 544
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M GH P+S Y +M RV A+ + V GV+
Sbjct: 545 GMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGVK 587
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 13/300 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
GR +D + + D +V KE L P ++ + + + G + L F M R G D
Sbjct: 241 GRMEDARKVFDEMV--KEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK-GIMPDV 297
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLARE 258
+ ++ +C+ G A LV++ ++I LI G+C G LD+A RE
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M + + V YN +++ + R EA +++ +ME GV +V T++ ++S
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRM-------DEARELVREMEAKGVKPDVVTYSTILS 410
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
CK + A +L +M E G P+ T+ LI+ L + R+G+ + M S G
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ Y + C +E+A+S+ ++M G PD TY +L+ R +A L
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGW 243
FF+ M D G + + ++V LC G+ A +++D P+ + L+ +
Sbjct: 144 FFDSMLSD-GVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAF 202
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G++D A+RL M GG + V +N +++ + K R +D A KV +M
Sbjct: 203 CRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMED-------ARKVFDEMVK 255
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ + ++N L+ CK+ S +A+ +F M G P+ TF LI + +A +
Sbjct: 256 EGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLER 315
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++ M+ G + + + + C ++ A+ +M+ P Y+ L+
Sbjct: 316 AVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALIN 375
Query: 424 KWCAHNRVDKANALFDEAVRNGVE 447
+C R+D+A L E GV+
Sbjct: 376 GYCMVGRMDEARELVREMEAKGVK 399
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 10/275 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I + +AG + +G M R+ G + ++ + +++ C+ G+ A V++
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREM-RERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+C + LI G+C+ G++DEA+ L REM G + V Y+ IL K
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
F+L+ + M NGV + T++ LI LC+ +R DA LF M G P
Sbjct: 418 THSAFQLNQQ-------MLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ LI + V + D M AG Y + L R ++A +
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
K+ + P + YD LM + C + + AL
Sbjct: 531 FKLYHEEPVPANIKYDALM-RCCRNAELKSVLALL 564
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 131/308 (42%), Gaps = 9/308 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ++ + +AGR F+ M ++ G D S +V C+ G + A + +
Sbjct: 229 TFNSVVNGICKAGRMEDARKVFDEMVKE-GLAPDGVSYNTLVGGYCKVGCSHEALSVFAE 287
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T I PD LI C G L+ A L REM G ++ + + ++D C+
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALID---GFCK 344
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K LD +A + +M + +V +N LI+ C + R ++A +L M G P
Sbjct: 345 KG---FLD-DALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKP 400
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ ++ + + ++ +M G Y + LC +R+ A +F
Sbjct: 401 DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLF 460
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
+ M + G PD TY L+ C V++A +L DE V+ GV Y V L K
Sbjct: 461 KNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKS 520
Query: 464 IAVKKGKK 471
K+ ++
Sbjct: 521 ARTKEAQR 528
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G+ +AYN +L +S DS M +GV NV T+N+L+ LC
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRFFDS--------MLSDGVAPNVYTYNILVRALCG 169
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
++A+ + M GC PN T+ L+ + +A V + ++D M+ G
Sbjct: 170 RGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVT 229
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + +C R+E A VF++M +G PD +Y+ L+ +C +A ++F E
Sbjct: 230 FNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMT 289
Query: 443 RNGV 446
R G+
Sbjct: 290 RKGI 293
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 7/204 (3%)
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
D L A+R M G YN + V LC + EA VL DM G
Sbjct: 135 DASLPSARRFFDSMLSDGVAPNVYTYNIL---VRALCGRGH----RKEALSVLRDMRGAG 187
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
N T+N L++ C+ + A +L M E G PN TF ++ + +A R+ +
Sbjct: 188 CDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDAR 247
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ D M G A Y + C + +A+SVF +M G PD T+ L+
Sbjct: 248 KVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVM 307
Query: 426 CAHNRVDKANALFDEAVRNGVEVK 449
C +++A L E G+++
Sbjct: 308 CKAGNLERAVGLVREMRERGLQMN 331
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 50/225 (22%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G D + ++ LCE A L K+ + + PD+ LI G C +G ++ A
Sbjct: 432 GVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERA 491
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL---------------------- 290
L EM + G V Y+ +++ +SK R K+ RL
Sbjct: 492 LSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC 551
Query: 291 ---------------------DSEAEKV---LLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+EA+KV +LD +N + ++VLI C+
Sbjct: 552 CRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWN---LDGSVYSVLIHGHCREGNV 608
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
A+ +M + G PN T+ + LI+ L++ V E D++I ++
Sbjct: 609 MKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 130/321 (40%), Gaps = 27/321 (8%)
Query: 117 FNHWLTQNANFSH--TDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV 174
FN LT A H T +LS D FG + +H L + L
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLH-------------ILINSFCHLN 110
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDD 233
R G VL ++ G + D + ++ +C G A L E F PD
Sbjct: 111 RVGFAFSVLAKILKL----GHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDV 166
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
LI G C G A RL M + + AYN I+D LC+ + +E
Sbjct: 167 VTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID---SLCKDRQV----TE 219
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A + +M G+ ++ T+N LI LC + + L M + P+ +F ++
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+L + +V E +++D+M G Y + C + +++A+ VF+ M G P
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339
Query: 414 DSETYDLLMTKWCAHNRVDKA 434
+ +Y+ L+ +C R+DKA
Sbjct: 340 NVISYNTLINGYCKIQRIDKA 360
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 13/271 (4%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D S VV+ LC+ G + A +V K + P+ L+ G C+ ++DEA ++
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS------------EAEKVLLDMEYN 304
M G ++YN +++ K+ R EA KV M
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCK 389
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G NV ++N LI+ CKI+R + A+ LF M P+ T+ LI L R+ +
Sbjct: 390 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 449
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ M + Y L LC + +AM++ + ++ +PD + ++ +
Sbjct: 450 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 509
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C ++ A LF G++ Y +
Sbjct: 510 MCRAGELEAARDLFSNLSSKGLQPDVWTYSI 540
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
+DG + R M R TV +N +L ++K+ L + M+
Sbjct: 42 IDGAISSFNR----MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ-------MDSF 90
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+P N+ T ++LI++ C + R A + ++ + G P+ TF LI+ + ++GE
Sbjct: 91 GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA 150
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ D+M G+ Y + LC + A+ + M P+ Y+ ++
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210
Query: 425 WCAHNRVDKANALFDEAVRNGVE 447
C +V +A LF E V G+
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGIS 233
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 105/275 (38%), Gaps = 44/275 (16%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDL 238
+ +L +M+ +G + +L +++ C +A L K PD
Sbjct: 78 STLLSLSHQMD-SFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTT 136
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI+G CV+GK+ EA L +M GF
Sbjct: 137 LIRGICVEGKIGEALHLFDKMIGEGFR--------------------------------- 163
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+V T+ LI+ LCK+ + AI+L M + C PN + +I SL +
Sbjct: 164 ---------PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+V E + M + G + Y + LC + + ++ +M PD ++
Sbjct: 215 RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF 274
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ ++ C +V +A+ + D+ ++ GVE Y
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 203 RLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
R++++ LC+N Y + A L+K + + PD ++ ++ I G C G+L+ A+ L +
Sbjct: 469 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 528
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G + Y+ + ++ LCR+ L EA K+ +M+ NG N +N +
Sbjct: 529 KGLQPDVWTYSIM---INGLCRRG----LLDEASKLFREMDENGCTLNGCIYNTITRGFL 581
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+ + AI+L M G + +T + +K L
Sbjct: 582 RNNETSRAIQLLQEMVARGFSADASTMTLFVKML 615
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 9/282 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMER-DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
++ L +AGR L + M R D + D +L VV+ LC++G A V+ +
Sbjct: 179 VNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSS 238
Query: 229 IF---PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ P+ + LI +C G + A L +M G V N I+ + + R
Sbjct: 239 VHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTG 298
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
E V + + N V T++ L+ L A++LF+ G P+
Sbjct: 299 AALEFFREKRTVWPEGKGNAV-----TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDA 353
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ +I L QA R+ + M MK AG+ + K Y + C +R+ +A + ++
Sbjct: 354 IMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQE 413
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
MK G PD TY+ L++ C + L + + +G +
Sbjct: 414 MKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ 455
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 14/314 (4%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEVLG-PK---TLASCIDRLVRAGRPTQVLGFFER 188
T + D F R + ++ LV+ E G P+ TL + + L RAGR L FF
Sbjct: 248 TYNCLIDAFCRVGNISMAYE-LVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306
Query: 189 MERDY-GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVD 246
+ K + + +V L A +L + +E PD + +I G
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+L++A +A M GF+L T AYN + ++ CRKK RL EA ++L +M+ G+
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNIL---IAGFCRKK---RL-HEAYELLQEMKEVGI 419
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T+N L+S CK +L +M + GC P+ TF L+ + ++ E
Sbjct: 420 RPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALR 479
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ M +G Y + LC ++ A+ +F++MK + T++ L+
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLR 539
Query: 427 AHNRVDKANALFDE 440
N +KA L D+
Sbjct: 540 DKNMPEKAFELMDQ 553
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 110/275 (40%), Gaps = 13/275 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFE-RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
TL + +D L ++GR + L F E RM +G + + +++ C G S A +LV+
Sbjct: 211 TLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVE 270
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELG---TVAYNCILDCVS 279
NE P + + + ++ G C G+ A RE R + G V Y+ ++ +
Sbjct: 271 KMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE-KRTVWPEGKGNAVTYSTLVGALL 329
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
L E M P + F +IS L + R EDA + M E
Sbjct: 330 HTNNVGMAMELFHE------KMSEGHSPDAIMYFT-MISGLTQAGRLEDACSMASSMKEA 382
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G + + +LI + R+ E E++ MK G Y L+ C
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAV 442
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ KM DG P T+ L+ +C ++D+A
Sbjct: 443 DELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEA 477
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 11/230 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL--GTVAYNCILDCVSKLCRKKDPF 288
PD +L+ G C G++ +A R+ M R ++ V N ++D + K R ++
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +G P N T+N LI C++ A +L +M G N T
Sbjct: 230 AFVEQRMS-----SVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTL 284
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD---YYEFLTRLCGIERIEQAMSVFEK 405
++ L +A R G E R K + GK + Y + L + AM +F +
Sbjct: 285 NTIVGGLCRAGRTGAALEFF-REKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHE 343
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++GH+PD+ Y +++ R++ A ++ G ++ K Y +
Sbjct: 344 KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNI 393
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 21/292 (7%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFT-----DYFGRRKDFKAI 150
T S + L + G A+ F+ +++ H+ + + +FT GR +D ++
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEG----HSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ + L K I R R + + M ++ G + D + ++ C
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLSGSC 434
Query: 211 ENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ G +A+ E L K + P L+ G+C GK+DEA R+ R M G V
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
YN ++D LC++ D +D E + +M+ VP NV TFN L+ L E A
Sbjct: 495 IYNTLIDF---LCKRGD---VDLAIE-LFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+L +M E C P+ T VL++ L +GE D + M+ + K+
Sbjct: 548 FELMDQMREERCFPDYVTVDVLMEWL---PVIGETDRLKRFMQQGEHTASKR 596
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 140/312 (44%), Gaps = 19/312 (6%)
Query: 144 RKDFKAIHDFLVDNKE-VLGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
+K F +I+ + +E + P ++ + I+ +G + F +M+ + G K
Sbjct: 61 QKRFDSIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQEN-GMKPTTS 119
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ +++ G + KL++ + E + P+ + ++L++ WC ++ EA + +
Sbjct: 120 TYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYK 179
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M G + V YN I ++ LD +AE V+L+M+ NGV N T +++S
Sbjct: 180 MIASGIQPDVVTYNTIATAYAQ------KGALD-QAEGVILEMQNNGVQPNERTCGIIMS 232
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
CK R +A++ YRM E G HPN F LIK DE+++ M+ G
Sbjct: 233 GYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGV-- 290
Query: 379 GKKDYYEFLTRLCGIER---IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
K D F T + +E+ +F+ M G PD+ Y +L + +KA
Sbjct: 291 -KPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAE 349
Query: 436 ALFDEAVRNGVE 447
L +++G +
Sbjct: 350 ELLTTMIKSGFQ 361
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
KD+ + K+ + L++ GK EA+ + + GG + ++Y +L ++
Sbjct: 7 KDSCRTVRSRTKLMNFLVE----KGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQK 62
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R + + S+ E+ NG+ + FN +I+ + E A++ F++M E G
Sbjct: 63 RFDSIYSIISQVEE-------NGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMK 115
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR-LCGIERIEQAMS 401
P +T+ LIK A + E ++++ M G Y L R C +RI +A +
Sbjct: 116 PTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWN 175
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
V KM G PD TY+ + T + +D+A + E NGV+
Sbjct: 176 VVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQ 221
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 29/274 (10%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G + D + + + G AE ++ + N + P+++ C +++ G+C +G++ EA
Sbjct: 184 GIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREA 243
Query: 253 KRLAREMYRGGFELGTVAYNC----------------ILDCVSKLCRKKDPFRLDS---- 292
R A M G V +N +L+ + + K D +
Sbjct: 244 LRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNA 303
Query: 293 --------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ ++ DM G+ + +++L + + E A +L M + G PN
Sbjct: 304 WSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPN 363
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
F +I A ++ + D+M G + K + + + +A + +
Sbjct: 364 VVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQ 423
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
M P+ T L+ W A +AN L
Sbjct: 424 IMTEFEVQPEKSTMLLVAEAWRATGMTKEANRLL 457
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ L + GRP Q + M G + +++ G A A K+VK+
Sbjct: 315 TYGAIINGLCKRGRPDQAKCLLDEMSCA-GLMPNVVVYSTLIDGFMRQGNADEAFKIVKE 373
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+A + P+ D LI+G C G++ A R+ ++M + G+ T+ YN +++ +
Sbjct: 374 MSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHN 433
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K++ F L +E K G+ NV T++++I+ LC+I SE A L +M G P
Sbjct: 434 KEEAFLLLNEMRK-------GGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKP 486
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N + LI + E + +M Y + L + ++++A+ +
Sbjct: 487 NAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYY 546
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++M G P+ TY L+ + ++KA L + + +G+
Sbjct: 547 DEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGL 589
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 138/329 (41%), Gaps = 12/329 (3%)
Query: 123 QNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV---LGPKTLASCIDRLVRAGRP 179
+ A S T S + + + +D ++ + + +E L T + I L RAG
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDL 238
+ G+ + ME DYG D + ++ LC+ G A+ L+ + + + P+ +
Sbjct: 295 EEAFGYKKEME-DYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+ G DEA ++ +EM G + + Y+ ++ + KL R A ++L
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRM-------GRASRIL 406
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G + T+N++I + E+A L M + G PN T+ ++I L Q
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI 466
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++++M + G Y ++ C A +KM + PD Y
Sbjct: 467 GESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCY 526
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ L+ ++D+A +DE + G +
Sbjct: 527 NSLIIGLSNVGKMDEAIEYYDEMLEKGFQ 555
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 7/227 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI+ +C L+ AK++ EM G L V YN ++ + + ++ F
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
E E +Y VP T+ +I+ LCK R + A L M G PN +
Sbjct: 299 GYKKEME------DYGLVPDGF-TYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + E +++ M +AG K Y + LC + R+ +A + ++M
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G+ D+ TY+L++ + ++A L +E + G+ Y +
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSI 458
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 127/312 (40%), Gaps = 47/312 (15%)
Query: 172 RLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIF 230
+L R GR +++L ++ G+ D + LV+E A L+ + I
Sbjct: 395 KLGRMGRASRILKQMTKI----GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGIS 450
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ ++I G C G+ + A L +M G + Y + +S CR+ F L
Sbjct: 451 PNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL---ISGYCREGS-FSL 506
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
E K M + ++ +N LI L + + ++AI+ + M E G PN+ T+
Sbjct: 507 ACETLK---KMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGG 563
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL----------------------- 387
LI A + + ++++ +M ++G Y + L
Sbjct: 564 LIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKG 623
Query: 388 ----TRLCGI--------ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
RL GI ++ A+SV ++ +G PDS Y L++ +C ++KA
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683
Query: 436 ALFDEAVRNGVE 447
L DE + G+E
Sbjct: 684 GLLDEMAKKGIE 695
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 75/189 (39%), Gaps = 13/189 (6%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ +V T++ LI CK+R E A K+ M E GC N T+ LI L +A
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E M+ G Y + LC R +QA + ++M G P+ Y
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMA 480
L+ + D+A + E GV+ Y R L K +M
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCK-------------LGRMG 400
Query: 481 RKRRRLKQI 489
R R LKQ+
Sbjct: 401 RASRILKQM 409
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 113/284 (39%), Gaps = 13/284 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S I L G+ + + +++ M + GF+ + + ++ G AE+L+ N
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEM-LEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLN 586
Query: 228 E-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ P+D I +++G+ L++ + M G Y ++ +S +
Sbjct: 587 SGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQ- 645
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
A VL +E NG+ + + LIS CK E A+ L M + G P +
Sbjct: 646 ------AAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGIS 699
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
+ LI ++ + + + + G Y + C I A+ ++ +M
Sbjct: 700 CYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEM 759
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALF--DEAVRNGVEV 448
T+G PD+ Y +L C+ N D ALF +E + G +
Sbjct: 760 LTEGVAPDAFVYSVL-AAGCS-NSGDLQQALFITEEMIARGYAI 801
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 112/300 (37%), Gaps = 28/300 (9%)
Query: 149 AIHDFLVDNKEVLGPKTL--ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
A+ V K L P +L S I +A + +G + M + G + ++
Sbjct: 647 AVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKK-GIEPGISCYNALI 705
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ C++ S+A + + P + + LI G+C G + +A L EM G
Sbjct: 706 DGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVA 765
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
Y+ + + C + +A + +M G + +FN L+ CK +
Sbjct: 766 PDAFVYSVL----AAGCSNSGDLQ---QALFITEEMIARGYAI-ISSFNTLVHGFCKRGK 817
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
++ +K + M + P+ T ++ L +A ++ E + ++ + D+
Sbjct: 818 LQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLS 877
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
S+F M G P ++++ + C +DKA L D V G
Sbjct: 878 ---------------SLFTDMINQGLVPLDVIHNMIQSH-CKQGYLDKALMLHDALVAKG 921
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 135/336 (40%), Gaps = 30/336 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVK 223
T + ID + R + GF M G + + + +++ LC +G +E LV+
Sbjct: 20 TYNTMIDGYCKLKRTDEAFGFLRSMGLK-GLEPNLITFNMIINGLCRDGRLKETSEVLVE 78
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK--- 280
+ PD+ + L+ G+C +G +A L EM R G V Y +++ + K
Sbjct: 79 MSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGN 138
Query: 281 ---------------LCRKKDPFR----------LDSEAEKVLLDMEYNGVPRNVETFNV 315
LC + + L EA +VL +M +G ++ T+N
Sbjct: 139 LNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNA 198
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI+ C + R E+AI L M G P+ ++ +I + + +M M
Sbjct: 199 LINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKS 258
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC R+ +A +F++M T PD TY L+ +C ++KA
Sbjct: 259 VLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKAL 318
Query: 436 ALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
L DE ++ G Y V L K K+ ++
Sbjct: 319 HLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARR 354
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 9/221 (4%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N P+ + +I G+C + DEA R M G E + +N I ++ LCR
Sbjct: 12 NGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMI---INGLCRDG- 67
Query: 287 PFRLDSEAEKVLLDMEYNG-VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
RL E +VL++M G VP V T+N L++ CK A+ L M G PN
Sbjct: 68 --RL-KETSEVLVEMSRKGYVPDEV-TYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI S+ +A + E D+M G ++ Y + +++A V +
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M G P TY+ L+ C R+++A L + V GV
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGV 224
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%)
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
+ME NG NV T+N +I CK++R+++A MG G PN TF ++I L +
Sbjct: 8 EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ E E++ M GY + Y + C QA+ + +M +G +P+ TY
Sbjct: 68 RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127
Query: 420 LLMTKWCAHNRVDKANALFDE 440
L+ C +++A FD+
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQ 148
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 7/192 (3%)
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
R +EM R G V YN ++D KL R + F L M G+ N+ TF
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGF-------LRSMGLKGLEPNLITF 56
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N++I+ LC+ R ++ ++ M G P+E T+ L+ + + + M
Sbjct: 57 NMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVR 116
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
G + Y + +C + +AM F++M G P+ TY ++ + +D+
Sbjct: 117 NGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDE 176
Query: 434 ANALFDEAVRNG 445
A + +E R+G
Sbjct: 177 AYRVLNEMTRSG 188
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 9/279 (3%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
+H +V N T S I+ + +AG + + FF++M G ++ + ++
Sbjct: 109 VLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVR-GLCPNERTYTTIING 167
Query: 209 LCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
+ G A +++ + T + P + LI G CV G+++EA L ++M G
Sbjct: 168 FAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPD 227
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V+Y+ I +S R ++ R A ++ ++M V + T++ LI LC+ RR
Sbjct: 228 VVSYSTI---ISGFARNQELDR----AFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLT 280
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A +F M P+E T+ LI + + + + + D M G+ Y +
Sbjct: 281 EACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLI 340
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
L R ++A + K+ D P + TY+ L+ C
Sbjct: 341 NGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCC 379
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 94/244 (38%), Gaps = 55/244 (22%)
Query: 180 TQVLGFFERMERDYGFKR-----------DKDSLRLVVEKLCENGYASYAEKLVKDTAN- 227
T + GF E D F+ D + +++ LCE + A + ++
Sbjct: 233 TIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTI 292
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
++ PD+ LI +C +G L++A L EM + GF V YN +++ ++K R K+
Sbjct: 293 KLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352
Query: 288 FRL-------DS------------------------------------EAEKVLLDMEYN 304
RL DS EA++V M
Sbjct: 353 RRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINK 412
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
N +NV+I C+I A KL+ M P+ T L L+K+L+ GE
Sbjct: 413 NHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGEL 472
Query: 365 DEMI 368
+E+I
Sbjct: 473 NEVI 476
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%)
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
++ F M GC PN T+ +I + R E + M G + +
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC R+++ V +M G+ PD TY+ L+ +C +A L E VRNG+
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 9/282 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMER-DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE 228
++ L +AGR L + M R D + D +L VV+ LC++G A V+ +
Sbjct: 179 VNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSS 238
Query: 229 IF---PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
+ P+ + LI +C G + A L +M G V N I+ + + R
Sbjct: 239 VHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTG 298
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
E V + + N V T++ L+ L A++LF+ G P+
Sbjct: 299 AALEFFREKRTVWPEGKGNAV-----TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDA 353
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ +I L QA R+ + M MK AG+ + K Y + C +R+ +A + ++
Sbjct: 354 IMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQE 413
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
MK G PD TY+ L++ C + L + + +G +
Sbjct: 414 MKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ 455
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 14/314 (4%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEVLG-PK---TLASCIDRLVRAGRPTQVLGFFER 188
T + D F R + ++ LV+ E G P+ TL + + L RAGR L FF
Sbjct: 248 TYNCLIDAFCRVGNISMAYE-LVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306
Query: 189 MERDY-GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVD 246
+ K + + +V L A +L + +E PD + +I G
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+L++A +A M GF+L T AYN + ++ CRKK RL EA ++L +M+ G+
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNIL---IAGFCRKK---RLH-EAYELLQEMKEVGI 419
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+V T+N L+S CK +L +M + GC P+ TF L+ + ++ E
Sbjct: 420 RPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALR 479
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ M +G Y + LC ++ A+ +F++MK + T++ L+
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLR 539
Query: 427 AHNRVDKANALFDE 440
N +KA L D+
Sbjct: 540 DKNMPEKAFELMDQ 553
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 110/275 (40%), Gaps = 13/275 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFE-RMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
TL + +D L ++GR + L F E RM +G + + +++ C G S A +LV+
Sbjct: 211 TLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVE 270
Query: 224 DTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELG---TVAYNCILDCVS 279
NE P + + + ++ G C G+ A RE R + G V Y+ ++ +
Sbjct: 271 KMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE-KRTVWPEGKGNAVTYSTLVGALL 329
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
L E M P + F +IS L + R EDA + M E
Sbjct: 330 HTNNVGMAMELFHE------KMSEGHSPDAIMYFT-MISGLTQAGRLEDACSMASSMKEA 382
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G + + +LI + R+ E E++ MK G Y L+ C
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAV 442
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ KM DG P T+ L+ +C ++D+A
Sbjct: 443 DELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEA 477
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 11/232 (4%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL--GTVAYNCILDCVSKLCRKKD 286
+ PD +L+ G C G++ +A R+ M R ++ V N ++D + K R ++
Sbjct: 168 VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQE 227
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+ +G P N T+N LI C++ A +L +M G N
Sbjct: 228 ALAFVEQRMS-----SVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIV 282
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD---YYEFLTRLCGIERIEQAMSVF 403
T ++ L +A R G E R K + GK + Y + L + AM +F
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFF-REKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELF 341
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ ++GH+PD+ Y +++ R++ A ++ G ++ K Y +
Sbjct: 342 HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNI 393
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 18/266 (6%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFT-----DYFGRRKDFKAI 150
T S + L + G A+ F+ +++ H+ + + +FT GR +D ++
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEG----HSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
+ + L K I R R + + M ++ G + D + ++ C
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLSGSC 434
Query: 211 ENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ G +A+ E L K + P L+ G+C GK+DEA R+ R M G V
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
YN ++D LC++ D +D E + +M+ VP NV TFN L+ L E A
Sbjct: 495 IYNTLID---FLCKRGD---VDLAIE-LFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSL 355
+L +M E C P+ T VL++ L
Sbjct: 548 FELMDQMREERCFPDYVTVDVLMEWL 573
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 143/336 (42%), Gaps = 32/336 (9%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK----TLASCIDRLVRAGRPTQ 181
F + +T S G+R+D +++ L+ E LG K T CI L RAG+ +
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMG-LLKEMETLGLKPNVYTFTICIRVLGRAGKINE 278
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF---------PD 232
+RM+ D G D + ++++ LC A KL D A E+F PD
Sbjct: 279 AYEILKRMD-DEGCGPDVVTYTVLIDALCT------ARKL--DCAKEVFAKMKTGRHKPD 329
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF-RLD 291
L+ + + LD + EM + G V + ++D + K + F +LD
Sbjct: 330 RVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLD 389
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
M G+ N+ T+N LI L ++ R +DA+++F M G P T++V
Sbjct: 390 V--------MRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVF 441
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I ++ E ++MK+ G A L L R +A +F +K G
Sbjct: 442 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 501
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
PDS TY+++M + +D+A L E V N E
Sbjct: 502 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCE 537
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 12/284 (4%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL---VKDTANEIFPDDKICDLLIK 241
FE+ +D G + + L++ L E A+ + VK+T PD + L+
Sbjct: 773 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTG--CIPDVATYNFLLD 830
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
+ GK+DE + +EM E T+ +N ++ + K D L + ++ D
Sbjct: 831 AYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYD---LMSDR 887
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
+++ T+ LI L K R +A +LF M ++GC PN + +LI +A
Sbjct: 888 DFS---PTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEA 944
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ RM G K Y + LC + R+++ + F ++K G NPD Y+L+
Sbjct: 945 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLI 1004
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIA 465
+ +R+++A LF+E ++ + P Y + L IA
Sbjct: 1005 INGLGKFHRLEEALVLFNE-MKKSRGITPDLYTYNSLILNLGIA 1047
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 7/207 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+ K V G L +A R+M GF L +YN ++ + K R +EA +V
Sbjct: 161 IFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLK-------SRFCTEAMEVY 213
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M +G +++T++ L+ L K R E + L M G PN TF + I+ L +A
Sbjct: 214 RRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRA 273
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ E E++ RM G Y + LC +++ A VF KMKT H PD TY
Sbjct: 274 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTY 333
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
L+ ++ + +D N + E ++G
Sbjct: 334 ITLLDRFSDNRDLDSVNQFWSEMEKDG 360
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 109/258 (42%), Gaps = 43/258 (16%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ID L ++GR + FE M DYG + + +++ + G A A L K
Sbjct: 895 TYGPLIDGLSKSGRLYEAKQLFEGMS-DYGCRPNCAIYNILINGFGKAGEADAACALFKR 953
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E + PD K +L+ C+ G++DE RE+ G V YN I++ + K R
Sbjct: 954 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHR 1013
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ L +E +K G+ ++ T+N LI NL E+A K++ + G P
Sbjct: 1014 LEEALVLFNEMKKS------RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1067
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF LI+ GY++ K E A +V+
Sbjct: 1068 NVFTFNALIR---------------------GYSLSGKP--------------EHAYAVY 1092
Query: 404 EKMKTDGHNPDSETYDLL 421
+ M T G +P++ TY+ L
Sbjct: 1093 QTMVTGGFSPNTGTYEQL 1110
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 20/325 (6%)
Query: 130 TDETLSFFTDYFGRRKD-FKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFF 186
T T F DY+G+ D A+ F + + P +A + + L +AGR + F
Sbjct: 434 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 493
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCV 245
+ +D G D + ++++ + G A KL+ + N PD + + LI
Sbjct: 494 YGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYK 552
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
++DEA ++ M + V YN +L + K + + EA ++ M G
Sbjct: 553 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ-------EAIELFEGMVQKG 605
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
P N TFN L LCK A+K+ ++M + GC P+ T+ +I L + +V E
Sbjct: 606 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 665
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEK-MKTDGHNPDSETYDLL 421
+MK Y D+ T L G+ + IE A + + + P + ++ L
Sbjct: 666 CFFHQMKKLVYP----DFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDL 721
Query: 422 MTKWCAHNRVDKANALFDEAVRNGV 446
M A +D A + + V NG+
Sbjct: 722 MGSILAEAGIDNAVSFSERLVANGI 746
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 126/312 (40%), Gaps = 12/312 (3%)
Query: 133 TLSFFTDYFGRRKDFK---AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
T + D + +F A D + D + T + I L+R R L F+ M
Sbjct: 367 TFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNM 426
Query: 190 ERDYGFKRDKDSLRLVVEKLCENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGK 248
E G K + + ++ ++G S E K I P+ C+ + G+
Sbjct: 427 E-SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 485
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
EAK++ + G +V YN ++ C SK+ EA K+L +M N
Sbjct: 486 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI-------DEAIKLLSEMVENCCEP 538
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V N LI+ L K R ++A K+F RM E P T+ L+ L + ++ E E+
Sbjct: 539 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M G + LC + + A+ + KM G PD TY+ ++ +
Sbjct: 599 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658
Query: 429 NRVDKANALFDE 440
+V +A F +
Sbjct: 659 GQVKEAMCFFHQ 670
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ DN E LG K T ID ++G L FE+M+ G + + + L
Sbjct: 422 IFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GIAPNIVACNASLYSL 480
Query: 210 CENGYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+ G A+++ +KD + PD ++++K + G++DEA +L EM E
Sbjct: 481 AKAGRDREAKQIFYGLKDIG--LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEP 538
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+ N +++ + K R+D EA K+ + M+ + V T+N L++ L K +
Sbjct: 539 DVIVVNSLINTLYK------ADRVD-EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 591
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++AI+LF M + GC PN TF L L + V +M+ +M G Y
Sbjct: 592 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 651
Query: 387 LTRLCGIERIEQAMSVFEKMK 407
+ L ++++AM F +MK
Sbjct: 652 IFGLVKNGQVKEAMCFFHQMK 672
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 141/340 (41%), Gaps = 20/340 (5%)
Query: 121 LTQNANFSHTDETLSFFTDYF---GRRKDFKAIHDFL---VDNKEVLGPKTLASCIDRLV 174
+ N+N HT ET ++ + G+ ++ + D + + ++ T+ C+ V
Sbjct: 110 VAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLS--V 167
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDD 233
+ G + F R R++GF + S ++ L ++ + + A ++ + + F P
Sbjct: 168 KGG--LRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSL 225
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ L+ G ++ L +EM G + + C+ L R +E
Sbjct: 226 QTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTI---CIRVLGRAGKI----NE 278
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A ++L M+ G +V T+ VLI LC R+ + A ++F +M P+ T++ L+
Sbjct: 279 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLD 338
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ ++ M+ G+ + + LC +A + + M+ G P
Sbjct: 339 RFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILP 398
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ TY+ L+ +R+D A +FD G VKP Y
Sbjct: 399 NLHTYNTLICGLLRVHRLDDALEIFDNMESLG--VKPTAY 436
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
I+ + G + + E M G D + ++ +C+ G A +L+ T+
Sbjct: 224 IEATIVEGGINEAMKLLEEM-LARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR----- 283
PD ++L++ + GK DE ++L EM+ G E V Y+ + +S LCR
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL---ISSLCRFGRID 339
Query: 284 -------------------KKDPF--------RLDSEAEKVLLDMEYNGVPRNVETFNVL 316
DP RLD A ++ M NG ++ +N +
Sbjct: 340 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDL-AIGIMDYMISNGCLPDIVNYNTI 398
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
++ LCK + A+++F ++ GC PN +++ +I +L+ M+ M S G
Sbjct: 399 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGI 458
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y ++ LC +E+A+ + + M+ G P +Y++++ C R+D A
Sbjct: 459 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 518
Query: 437 LFDEAVRNGVEVKPKE 452
+F E + G +P E
Sbjct: 519 MFAEMIEKG--CRPNE 532
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 14/255 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G + +K + +++ LC G A ++K E+ PD D LI C +G+LD A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ M G V YN IL + LC+ + ++A ++ + G P NV +
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTIL---AALCKNGNA----NQALEIFNKLRGMGCPPNVSS 429
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +IS L A+ + M G P+E T+ LI L + V E ++D M+
Sbjct: 430 YNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDME 489
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM-----TKWCA 427
+G+ Y L LC + RI+ A+ +F +M G P+ TY LL+ W
Sbjct: 490 QSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGW-R 548
Query: 428 HNRVDKANALFDEAV 442
++ AN+LF V
Sbjct: 549 TEAMELANSLFSRDV 563
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 13/236 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
FGR + ++ +++ + L P T + I L + GR +G + M + G D
Sbjct: 335 FGRIDEAISVLKVMIEKE--LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN-GCLPD 391
Query: 199 KDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ ++ LC+NG A+ A E K P+ + +I G A +
Sbjct: 392 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 451
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
M G + + YN ++ C LCR L EA +L DME +G V ++N+++
Sbjct: 452 AMISKGIDPDEITYNSLISC---LCRDG----LVEEAIGLLDDMEQSGFRPTVISYNIVL 504
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
LCK+RR +DAI +F M E GC PNETT+++LI+ + A E E+ + + S
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 560
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 120/265 (45%), Gaps = 18/265 (6%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN---GYA-SYAEKLVKDTANEIFPDDKI 235
TQVL RM + GF D + +++ LC G A + ++L+ D P
Sbjct: 167 TQVL---NRM-KARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNC---MPTVIT 219
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+LI+ V+G ++EA +L EM G YN I + +C++ + A
Sbjct: 220 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI---IRGMCKEG----MVERAA 272
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+++ + G +V ++N+L+ + ++ KL M GC PN+ T+ +LI SL
Sbjct: 273 ELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ R+ E ++ M Y ++ LC R++ A+ + + M ++G PD
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392
Query: 416 ETYDLLMTKWCAHNRVDKANALFDE 440
Y+ ++ C + ++A +F++
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNK 417
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 8/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +C LIKG+ +++A R+ E+ E AYN + +S C+
Sbjct: 111 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAV---ISGFCKVNQI--- 163
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A +VL M+ G ++ T+N++I +LC R+ A+ + ++ C P T+ +
Sbjct: 164 -EAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTI 222
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI++ + E ++++ M + G Y + +C +E+A + + + G
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD +Y++L+ + + D+ L E G E Y +
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 327
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 125/271 (46%), Gaps = 8/271 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
TL I R + + MER G D+ + ++++ C A +L +
Sbjct: 290 TLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDE 349
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N + + IC+ LI G+C +G++ EA+RL M E + +Y+ ++D CR
Sbjct: 350 MLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMD---GFCR 406
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ L ++A V +M G+ NV T N L+ LC++ EDA+ +++ M + G P
Sbjct: 407 EG----LVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTP 462
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E ++ L+ L++ + + + + GY + + C +E++ +A F
Sbjct: 463 DEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETF 522
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+MK G PD TY L+ +C V++A
Sbjct: 523 NRMKELGFEPDGVTYRTLIDGYCKLGNVEEA 553
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 136/338 (40%), Gaps = 51/338 (15%)
Query: 149 AIHDFLVDNKEVLG-PKTLASC---IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
A+H F DN LG +L SC + LVR G + + ++ + R G D + +
Sbjct: 167 ALHVF--DNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINR-LGIVPDVFTCSI 223
Query: 205 VVEKLCENGYASYAEKLVKD-----------TANE------------------------- 228
+V C++G+ + A VK+ T N
Sbjct: 224 MVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERG 283
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKDP 287
I + LLIKG+C KL+EA+++ REM R G L AY ++D ++C+ D
Sbjct: 284 ILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDA 343
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RL E V G+ N+ N LI+ CK + +A +L RM +W P +
Sbjct: 344 VRLRDEMLNV-------GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYS 396
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ + V + + + M G + L LC + E A+ V+ M
Sbjct: 397 YSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLML 456
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G PD +Y L+ +A AL+++ + G
Sbjct: 457 KRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARG 494
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 29/270 (10%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ C+NG S AE+L+ + ++ P+ L+ G+C +G + +A + EM R G
Sbjct: 365 LINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVG 424
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRL-----------DSEAEKVLLDMEYN-------- 304
+ V +N +L + ++ +D + D + LLD+ +
Sbjct: 425 IQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRAL 484
Query: 305 ---------GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
G R+ FN +I+ CK+ + +A + F RM E G P+ T+ LI
Sbjct: 485 ALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGY 544
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ V E ++ ++M+ + Y + L ++ + M + +M G +P+
Sbjct: 545 CKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNV 604
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY L+ WC R+DKA + + + G
Sbjct: 605 VTYGTLIAGWCDEGRLDKAFTAYFDMIEKG 634
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 12/231 (5%)
Query: 221 LVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD-C 277
LV D N I PD C +++ +C DG ++ A +EM GFEL V YN ++D C
Sbjct: 204 LVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGC 263
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
VS D R AE VL M G+ RN T +LI C+ + E+A K+ M
Sbjct: 264 VS----IGDMER----AEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315
Query: 338 -EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
G +E + VLI + ++ + + D M + G + + C ++
Sbjct: 316 RSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQV 375
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+A + +M P+S +Y LM +C V KA ++++E +R G++
Sbjct: 376 SEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQ 426
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 30/237 (12%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR--------------- 283
LI GWC +G+LD+A +M GF + + I+ + +L R
Sbjct: 610 LIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLD 669
Query: 284 ------------KKDPFRLDSEAEKVLLDMEYNG--VPRNVETFNVLISNLCKIRRSEDA 329
K D LDS+ LD +P +V +N+ I+ LCK + +DA
Sbjct: 670 VFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSV-VYNIAIAGLCKSGKVDDA 728
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
K+F + G P+ T+ LI A V + + D M G A Y +
Sbjct: 729 KKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALING 788
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
LC +++A +F+K+ G P+ +Y++L+ +C + +A L ++ ++ G+
Sbjct: 789 LCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGI 845
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 42/223 (18%)
Query: 218 AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
A+ L + + + P+ + ++ I G C GK+D+AK++ + GF Y ++
Sbjct: 694 ADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHG 753
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
S D F L E K G+ N+ T+N LI+ LCK + A KLF ++
Sbjct: 754 YSAAGNVNDAFSLRDEMLK-------RGLAPNIITYNALINGLCKSGNLDRAQKLFDKLH 806
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
G PN ++ +LI GY C
Sbjct: 807 LKGLAPNVISYNILID---------------------GY--------------CKNGNTR 831
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+A+ + KM +G +P TY L+ +C + KA L DE
Sbjct: 832 EALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDE 874
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
+ + LC++G A+K+ F PD+ LI G+ G +++A L EM +
Sbjct: 714 IAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKR 773
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + YN + ++ LC+ + R A+K+ + G+ NV ++N+LI CK
Sbjct: 774 GLAPNIITYNAL---INGLCKSGNLDR----AQKLFDKLHLKGLAPNVISYNILIDGYCK 826
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +A+ L +M + G P+ T+ LI + +G+ ++D M+
Sbjct: 827 NGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMR 876
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 120/285 (42%), Gaps = 21/285 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY---ASYAEKL 221
+ ++ +D R G T+ + + M R G + + + +++ LC G A + L
Sbjct: 396 SYSTLMDGFCREGLVTKAISVYNEMLR-VGIQSNVVTHNSLLKGLCRVGAFEDALHVWHL 454
Query: 222 VKDTANEIFPDD----KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+ + PD+ + DLL K G+ A L ++ G+ T A+N +
Sbjct: 455 MLKRG--VTPDEVSYCTLLDLLFKM----GEFFRALALWNDILARGYGRSTYAFNTM--- 505
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
++ C+ + EAE+ M+ G + T+ LI CK+ E+A K+ +M
Sbjct: 506 INGFCKMEKMI----EAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKME 561
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ P+ + LI L+++ + E +++ M G + Y + C R++
Sbjct: 562 KEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLD 621
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+A + + M G P+ +++ R+D+AN L + V
Sbjct: 622 KAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 666
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 15/281 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I RAG + + +M D D + ++ C+ G A +L +
Sbjct: 289 TYNSLIGGYCRAGDMDEAIRLLGKMVDD-NCAPDVITYTTLMSAFCKMGRLDDAYELFQQ 347
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CVSKL 281
AN++ PD L+ G C +G++++A L E+ R G YNC++D C S
Sbjct: 348 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQ 407
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG- 340
RK AE+++ D G N T+N+L++ C+ R++ A++ ++ G
Sbjct: 408 VRK---------AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 458
Query: 341 -CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
C + + +++ +L + R + + + M GY + + LC + +QA
Sbjct: 459 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 518
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ E+M GH P T D +++ +C + KA+ L E
Sbjct: 519 HELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 559
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 11/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ +D L + R + + GF D + V++ LC+ G A + ++
Sbjct: 221 TYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
+ P + LI G+C G +DEA RL +M + Y ++ K+ R
Sbjct: 281 MS--CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRL 338
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D + L + M N + +V TF L+ LC R EDA++L + GC P
Sbjct: 339 DDAYELFQQ-------MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ ++ ++ +V + +E++ +S G+ Y + C R +QA+ +
Sbjct: 392 IYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD 451
Query: 405 KMKTDGH-NPDS-ETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++ ++G P S Y +++ C R D A ++E ++ G
Sbjct: 452 QLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG 494
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 23/289 (7%)
Query: 152 DFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE 211
DFL K V G L +AGR + + M D +L +VV+ LC
Sbjct: 148 DFLTYTKLVHG----------LSKAGRLRDAVQVLQEMVSARHVP-DNTTLTVVVQSLCL 196
Query: 212 NGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA-KRLAREMYRGGFELGTV 269
A +LV++ + + I L+ G C +LDEA L E+ R GF V
Sbjct: 197 GDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIV 256
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
Y+ ++D + K R +D + E + P + T+N LI C+ ++A
Sbjct: 257 TYSTVIDGLCKAGRLRDAVDIFEE---------MSCAPTAI-TYNSLIGGYCRAGDMDEA 306
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
I+L +M + C P+ T+ L+ + + R+ + E+ +M + + + +
Sbjct: 307 IRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 366
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LCG R+E A+ + E++ G P TY+ ++ +C N+V KA L
Sbjct: 367 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELV 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 118/284 (41%), Gaps = 14/284 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T ++ ID L +AGR + FE M + ++ C G A +L+ K
Sbjct: 257 TYSTVIDGLCKAGRLRDAVDIFEEMS----CAPTAITYNSLIGGYCRAGDMDEAIRLLGK 312
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD L+ +C G+LD+A L ++M V + ++D + R
Sbjct: 313 MVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+D L E + G P + T+N ++ CK + A +L G P
Sbjct: 373 MEDALELLEEITR-------RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVP 425
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAG--YAIGKKDYYEFLTRLCGIERIEQAMS 401
N T+ +L+ +A R + + +D++ S G Y L LC R + A+
Sbjct: 426 NTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQ 485
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+E+M G+ P + T+ ++ C ++ +A+ L +E ++ G
Sbjct: 486 FYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 529
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 29/261 (11%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL----------LI 240
RD G D L ++ +LC+ +DT + DK+ +L LI
Sbjct: 38 RDRGLSPDPVELNTILAELCD----------ARDTTTAMALFDKMAELGAVNHTTYYNLI 87
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
C LDEA L +M G GT+ +N + + LCR RL A V
Sbjct: 88 HPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVV---IGGLCRAG---RL-RHALGVYRQ 140
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + P + T+ L+ L K R DA+++ M P+ TT V+++SL R
Sbjct: 141 MN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDR 199
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS-VFEKMKTDGHNPDSETYD 419
V + E+++ M G A Y + LC ER+++A++ + ++ G PD TY
Sbjct: 200 VDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYS 259
Query: 420 LLMTKWCAHNRVDKANALFDE 440
++ C R+ A +F+E
Sbjct: 260 TVIDGLCKAGRLRDAVDIFEE 280
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 40/189 (21%)
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
ELG V + + + LC+ RL EA +LLDM+ G+ NV+I LC+
Sbjct: 74 ELGAVNHTTYYNLIHPLCKA----RLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAG 129
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
R A+ ++ +M + HP + FL K ++ ++ G
Sbjct: 130 RLRHALGVYRQMNDA--HPPD--FLTYTKLVHGLSKAG---------------------- 163
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
R+ A+ V ++M + H PD+ T +++ C +RVD A L +E +
Sbjct: 164 ----------RLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHR 213
Query: 445 GVEVKPKEY 453
G+ Y
Sbjct: 214 GMAANAITY 222
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 30/310 (9%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
+ G+ Q + F +M R G D + V+ LC++G A + + +E + P +
Sbjct: 386 KQGKVDQAMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL--- 290
+ + LI C+ K D+AK L EM G L T+ +N I+D K R + +L
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 291 -------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
EA K+L M G+ + T+N LI+ CKI R
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
EDA+ LF M G P+ T+ ++++ L+Q R E+ + +G + Y
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L LC ++A+ +F+ + ++ T+++++ R D+A LF NG
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Query: 446 VEVKPKEYRV 455
+ + Y +
Sbjct: 685 LVPDVRTYSL 694
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 9/295 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V N + +T S + +G+P + +GF ++M D G + D + +++ LC+NG
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNG 318
Query: 214 YASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ A K+ T + P+ L++G+ G L E L M R G ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ C ++D +A V M G+ + T+ +I LCK R EDA++
Sbjct: 379 ILI------CAYAKQGKVD-QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F +M + P + LI SL + + E+I M G + + + C
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
R+ ++ +F+ M G PD TY L+ +C ++D+A L V G++
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 8/231 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLD 250
D G D +++ C+ G +EKL + PD LI G+C+ GK+D
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA +L M G + V YN +++ K+ R +D L E ME +GV ++
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE-------MESSGVSPDI 584
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N+++ L + RR+ A +L+ + E G +T+ +++ L + E M
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ + + + + L + R ++A +F + +G PD TY L+
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 16/249 (6%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++ + A+E+ P+ +L+ C G+LD + + GF + +A+ +L
Sbjct: 78 RMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPML---K 134
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC K R + VL M G NV ++N+L+ LC RS++A++L M +
Sbjct: 135 GLCADK---RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDD 191
Query: 340 G--CHPNETTFLVLIKSLYQAARV----GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
G C P+ ++ +I ++ + G EM+DR G Y + LC
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR----GILPNVVTYSSIIAALCKA 247
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +++AM V M +G P+ TY+ ++ +C+ + +A + +GVE Y
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307
Query: 454 RVDPRYLKK 462
YL K
Sbjct: 308 NSLMDYLCK 316
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 15/265 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV--KDTANEIFPDDKICDLLIKGWCVDGKLDE 251
GF D + +++ LC + S A +V + T P+ ++L+KG C D + E
Sbjct: 121 GFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQE 180
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR---LDSEAEKVLLDMEYNGVPR 308
A L + M G + C D VS F+ LD +A +M G+
Sbjct: 181 ALELLQMMPDDGGD-------CPPDVVSYTTVINGFFKEGDLD-KAYGTYHEMLDRGILP 232
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV T++ +I+ LCK + + A+++ M + G PN T+ ++ + + E +
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M S G Y + LC R +A +F+ M G P+ TY L+ +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
+ + + L D VRNG+ P Y
Sbjct: 353 GALVEMHGLLDLMVRNGIH--PNHY 375
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ID + GR + F+ M R G K D + +++ C G A KL+ +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD + LI G+C ++++A L REM G + YN IL + +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT----- 597
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + A+++ + + +G + T+N+++ LCK +++A+++F +
Sbjct: 598 --RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
TF ++I +L + R E ++ + + G
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + I+ + R L F ME G D + ++++ L + + A++L V
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESS-GVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T + + ++++ G C + DEA R+ + + +L T +N ++ + K+ R
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA+ + + NG+ +V T++++ NL + E+ LF M E GC
Sbjct: 670 -------NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722
Query: 344 NETTFLVLIKSLYQ---AARVGEGDEMID 369
N +++ L Q R G MID
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMID 751
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 30/310 (9%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
+ G+ Q + F +M R G D + V+ LC++G A + + +E + P +
Sbjct: 386 KQGKVDQAMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL--- 290
+ + LI C+ K D+AK L EM G L T+ +N I+D K R + +L
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 291 -------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
EA K+L M G+ + T+N LI+ CKI R
Sbjct: 505 MVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
EDA+ LF M G P+ T+ ++++ L+Q R E+ + +G + Y
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L LC ++A+ +F+ + ++ T+++++ R D+A LF NG
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Query: 446 VEVKPKEYRV 455
+ + Y +
Sbjct: 685 LVPDVRTYSL 694
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 148/366 (40%), Gaps = 65/366 (17%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V N + +T S + +G+P + +GF ++M D G + D + +++ LC+NG
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNG 318
Query: 214 YASYAEKLVKDTA------------------------------------NEIFPDDKICD 237
+ A K+ N I P+ +
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR-----LDS 292
+LI + GK+D+A + +M + G TV Y ++ + K R +D R +D
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 293 -----------------------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDA 329
+A++++L+M G+ + FN +I + CK R ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 330 IKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTR 389
KLF M G PN T+ LI A ++ E +++ M S G Y +
Sbjct: 499 EKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558
Query: 390 LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
C I R+E A+ +F +M++ G +PD TY++++ R A L+ +G +++
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618
Query: 450 PKEYRV 455
Y +
Sbjct: 619 LSTYNI 624
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 16/249 (6%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++ + A+E+ P+ +LI C G+LD + + GF + +A+ +L
Sbjct: 78 RMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLL---K 134
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC K R + VL M G NV ++N+L+ LC RS++A++L M +
Sbjct: 135 GLCADK---RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191
Query: 340 G--CHPNETTFLVLIKSLYQAARV----GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
G C P+ ++ +I ++ + G EM+DR G Y + LC
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR----GILPNVVTYNSIIAALCKA 247
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +++AM V M +G P+ TY+ ++ +C+ + +A + +GVE Y
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307
Query: 454 RVDPRYLKK 462
YL K
Sbjct: 308 NSLMDYLCK 316
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 15/265 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV--KDTANEIFPDDKICDLLIKGWCVDGKLDE 251
GF+ D + +++ LC + S A +V + T P+ ++L+KG C + + E
Sbjct: 121 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQE 180
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR---LDSEAEKVLLDMEYNGVPR 308
A L + M G + C D VS F+ LD +A +M G+
Sbjct: 181 ALELLQMMPDDGGD-------CPPDVVSYTTVINGFFKEGDLD-KAYGTYHEMLDRGILP 232
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV T+N +I+ LCK + + A+++ M + G PN T+ ++ + + E +
Sbjct: 233 NVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M S G Y + LC R +A +F+ M G P+ TY L+ +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
+ + + L D VRNG+ P Y
Sbjct: 353 GALVEMHGLLDLMVRNGIH--PNHY 375
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ID + GR + F+ M R G K + + +++ C G A KL+ +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVR-IGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD + LI G+C ++++A L REM G + YN IL + +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT----- 597
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + A+++ + + +G + T+N+++ LCK +++A+++F +
Sbjct: 598 --RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
TF ++I +L + R E ++ + + G
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + I+ + R L F ME G D + ++++ L + + A++L V
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESS-GVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T + + ++++ G C + DEA R+ + + +L T +N ++ + K+ R
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA+ + + NG+ +V T++++ NL + E+ LF M E GC
Sbjct: 670 -------NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722
Query: 344 NETTFLVLIKSLYQ---AARVGEGDEMID 369
N +++ L Q R G MID
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMID 751
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 9/280 (3%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDD 233
++G + + F M+R+ D S V+ LC+ A++L K+ E P+
Sbjct: 141 QSGDSHKAMDLFCMMKRNC-LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNS 199
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
LI G+C +G ++E L EM + G E Y+ + +S C K D R
Sbjct: 200 VTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSAL---ISGFCSKGDIER---- 252
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+++ +M V NV T++ L++ LCK ++ ++A ++ M P+ + VL
Sbjct: 253 GKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLAD 312
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L + R + +++D M G Y + LC R++ A+ + E M G P
Sbjct: 313 GLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKP 372
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
D TY L+ C ++D+A L + + +KP +
Sbjct: 373 DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 167/403 (41%), Gaps = 42/403 (10%)
Query: 89 IFSHVTPTPSLVQSTLNFS-PEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKD- 146
+F T +L++S +N P +LG L F + F + D
Sbjct: 90 VFPCFTSLSALIESFVNTQKPSFAFGVLG----LIMKRGFHLNVYNFNLLLKGFCQSGDS 145
Query: 147 FKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
KA+ F + + L P ++ + I+ L + R + F+ M + K + +
Sbjct: 146 HKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEM-KGGECKPNSVTFSA 204
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDK-ICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+NG L+++ D + LI G+C G ++ K L EM R
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRL----------------------------DSEAE 295
V Y+C+++ + K + K+ ++ S+A
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
KVL M G N T+N +I+ LCK R +DA+ + M + G P+ T+ L+K L
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEKMKTDGHN 412
++ E ++++ + S + I K D + F + LC R+ A V+ M G
Sbjct: 385 CGVGKIDEAVDLLNLLMSKEFHI-KPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFP 443
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ TY++L+ + + ++ KA L+ +AV +G+ Y V
Sbjct: 444 SNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTV 486
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 122/255 (47%), Gaps = 11/255 (4%)
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-I 229
D L + GR + + + M + G + + + ++ LC+ G A +++ A +
Sbjct: 312 DGLSKNGRASDAIKVLDLMVK-RGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGK 370
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL--GTVAYNCILDCVSKLCRKKDP 287
PD L+KG C GK+DEA L + F + A+N + + +LC+++
Sbjct: 371 KPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLV---IQELCKQR-- 425
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RL A++V M G P N+ T+N+LI + A++L+ + G PN T
Sbjct: 426 -RL-RHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAAT 483
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ VLI L + + + ++ +++G +Y + LC +EQA ++F++M+
Sbjct: 484 YTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMR 543
Query: 408 TDGHNPDSETYDLLM 422
H+PD ++++++
Sbjct: 544 NANHDPDVVSFNIII 558
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 15/253 (5%)
Query: 198 DKDSLRLVVEKLCENGYASYAEK---LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKR 254
D + ++ + L +NG AS A K L+ E P++ + +I G C +G++D+A
Sbjct: 303 DVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEE--PNNVTYNAIINGLCKEGRVDDALG 360
Query: 255 LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE--KVLLDMEYNGVPRNVET 312
+ M + G + V Y+ + V LC ++D + +L+ E++ P +V
Sbjct: 361 ILETMAKKGKKPDVVTYSTL---VKGLC---GVGKIDEAVDLLNLLMSKEFHIKP-DVFA 413
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN++I LCK RR A +++Y M E G N T+ +LI A ++ + E+
Sbjct: 414 FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAV 473
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+G + Y + LC ++ + A +F K + G P Y+ LM C + V+
Sbjct: 474 DSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVE 533
Query: 433 KANALFDEAVRNG 445
+A LF E +RN
Sbjct: 534 QARNLFQE-MRNA 545
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 141/351 (40%), Gaps = 52/351 (14%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + D +V E T + I+ L + GR LG E M + G K D +
Sbjct: 318 GRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKK-GKKPDVVT 376
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF---PDDKICDLLIKGWCVDGKLDEAKRLARE 258
+V+ LC G A L+ ++ F PD +L+I+ C +L AKR+
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436
Query: 259 MYRGGFELGTVAYNCILD---CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
M GF V YN ++D KL + + ++ D +G+ N T+ V
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWK----------DAVDSGISPNAATYTV 486
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LI+ LCK++ A LF + G P + + L+ SL + + V + + M++A
Sbjct: 487 LINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNAN 546
Query: 376 Y-------------AIGKKD----------------------YYEFLTRLCGIERIEQAM 400
+ + D + + R + ++++A
Sbjct: 547 HDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAA 606
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
S++E+M + GH PD+ +D L+ + + +K ++ + V + K
Sbjct: 607 SLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSK 657
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 18/293 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANE 228
ID + AG+ T+ L ++ D G + + +++ LC+ S A+ L K A+
Sbjct: 453 IDGYLSAGKLTKALELWKD-AVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASG 511
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P + L+ C + +++A+ L +EM + V++N I+D K
Sbjct: 512 TRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLK------AG 565
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++S E +L + N VP N+ TF++LI+ K+ + ++A L+ RM G P+ F
Sbjct: 566 DVESAKELLLEMLNMNLVPDNI-TFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLF 624
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEK 405
L+K + + M+ +M + K L LC + + IE+ + F +
Sbjct: 625 DSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQ 684
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALF-DEAVRNG-VEVKPKEYRVD 456
+ G + +LLM H D AN L + A+ G V++ RVD
Sbjct: 685 HTSVG--ASIKCNELLMKLNKVHP--DNANILVANTAMGTGKVKIYGARVRVD 733
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 128/297 (43%), Gaps = 19/297 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD---------YGFKRDKDSLRLVVEKLCENGYA 215
T + ++ L R GR + L +RM + K D +V++LC++G
Sbjct: 12 TFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKDGNH 71
Query: 216 SYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
A+ L + + IFP+ + +I +C G+ +A +L R M V ++ +
Sbjct: 72 INAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSAL 131
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
++ K R SEAE++ +M + T+N +I CK R +DA ++
Sbjct: 132 INAFVKE-------RKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 184
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M GC P+ TF LI +A RV G E+ M G Y + C +
Sbjct: 185 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 244
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
++ A + +M + G PD T+ ++ C+ + KA A+ ++ ++ EV P+
Sbjct: 245 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS--EVCPR 299
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 11/222 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI-------LDCVSKLCRKKDPFRLD 291
L+ C +G++ EA L M G + + + I V +LC+ +
Sbjct: 16 LMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKDGNHIN-- 73
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
A+ + +M G+ NV T+N +I + C R DA +L M E +P+ TF L
Sbjct: 74 --AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSAL 131
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I + + +V E +E+ M Y + C +R++ A + + M + G
Sbjct: 132 INAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC 191
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+PD T+ L+ +C RVD +F E R G+ Y
Sbjct: 192 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 233
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY---AIGKKDY-------YE 385
M E GC PN TF L+ SL + RV E ++DRM G+ A+G+
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ RLC A ++F +M G P+ TY+ ++ +C R A+ L
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 113
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 22/159 (13%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G NV TFN L+++LC+ R +A+ L RM E G PN + + A
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNA------MGQSHIKAD 54
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYY----------EFLTRLCGIE------RIEQAMSVFE 404
V ++DR+ G I ++ + LT C I+ R A +
Sbjct: 55 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 114
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
M NPD T+ L+ + +V +A ++ E +R
Sbjct: 115 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR 153
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 30/310 (9%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
+ G+ Q + F +M R G D + V+ LC++G A + + +E + P +
Sbjct: 386 KQGKVDQAMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL--- 290
+ + LI C+ K D+AK L EM G L T+ +N I+D K R + +L
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 291 -------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
EA K+L M G+ + T+N LI+ CKI R
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
EDA+ LF M G P+ T+ ++++ L+Q R E+ + +G + Y
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L LC ++A+ +F+ + ++ T+++++ R D+A LF NG
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Query: 446 VEVKPKEYRV 455
+ + Y +
Sbjct: 685 LVPDVRTYSL 694
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 9/295 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
+V N + +T S + +G+P + +GF ++M D G + D + +++ LC+NG
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNG 318
Query: 214 YASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ A K+ T + P+ L++G+ G L E L M R G ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++ C ++D +A V M G+ + T+ +I LCK R EDA++
Sbjct: 379 ILI------CAYAKQGKVD-QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F +M + P + LI SL + + E+I M G + + + C
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
R+ ++ +F+ M G PD TY L+ +C ++D+A L V G++
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 16/249 (6%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++ + A+E+ P+ +LI C G+LD + + GF + +A+ +L
Sbjct: 78 RMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLL---K 134
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
LC K R + VL M G NV ++N+L+ LC RS++A++L M +
Sbjct: 135 GLCADK---RTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191
Query: 340 G--CHPNETTFLVLIKSLYQAARV----GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
G C P+ ++ +I ++ + G EM+DR G Y + LC
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR----GILPNVVTYSSIIAALCKA 247
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ +++AM V M +G P+ TY+ ++ +C+ + +A + +GVE Y
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307
Query: 454 RVDPRYLKK 462
YL K
Sbjct: 308 NSLMDYLCK 316
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 8/231 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLD 250
D G D +++ C+ G +EKL + PD LI G+C+ GK+D
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA +L M G + V YN +++ K+ R +D L E ME +GV ++
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE-------MESSGVSPDI 584
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+N+++ L + RR+ A +L+ + E G +T+ +++ L + E M
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ + + + + L + R ++A +F + +G PD TY L+
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 15/265 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLV--KDTANEIFPDDKICDLLIKGWCVDGKLDE 251
GF+ D + +++ LC + S A +V + T P+ ++L+KG C + + E
Sbjct: 121 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQE 180
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR---LDSEAEKVLLDMEYNGVPR 308
A L + M G + C D VS F+ LD +A +M G+
Sbjct: 181 ALELLQMMPDDGGD-------CPPDVVSYTTVINGFFKEGDLD-KAYGTYHEMLDRGILP 232
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
NV T++ +I+ LCK + + A+++ M + G PN T+ ++ + + E +
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M S G Y + LC R +A +F+ M G P+ TY L+ +
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 429 NRVDKANALFDEAVRNGVEVKPKEY 453
+ + + L D VRNG+ P Y
Sbjct: 353 GALVEMHGLLDLMVRNGIH--PNHY 375
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ID + GR + F+ M R G K D + +++ C G A KL+ +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD + LI G+C ++++A L REM G + YN IL + +
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT----- 597
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + A+++ + + +G + T+N+++ LCK +++A+++F +
Sbjct: 598 --RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
TF ++I +L + R E ++ + + G
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VK 223
T + I+ + R L F ME G D + ++++ L + + A++L V
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESS-GVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T + + ++++ G C + DEA R+ + + +L T +N ++ + K+ R
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ EA+ + + NG+ +V T++++ NL + E+ LF M E GC
Sbjct: 670 -------NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722
Query: 344 NETTFLVLIKSLYQ---AARVGEGDEMID 369
N +++ L Q R G MID
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMID 751
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 8/283 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + G + F ++ R G+K + + ++ C+ + AE L+
Sbjct: 331 THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + P+ LI G C G A L M + GF YN I+D LC+
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIID---GLCK 447
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K LD EA ++L + +G+ + T+ +L+S C+ + ++ F +M + G P
Sbjct: 448 KGS---LD-EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTP 503
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ LI + ++ E + + + S G KK Y + C A+ +F
Sbjct: 504 DIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++M G PDS TY L++ C +++D A L+D + G+
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 20/321 (6%)
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
F+VDN T ID + G +V+G+F +M + G + + ++ LC+
Sbjct: 255 FIVDNA------TCTLIIDAFCQKGYVNRVVGYFWKMV-EMGLAPNVINFTALINGLCKQ 307
Query: 213 GYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVA 270
G A +L+++ + P+ LI G C G ++A RL ++ R G++
Sbjct: 308 GSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
Y +++ C++ R AE +L M+ G+ N T+ LI CK+ A
Sbjct: 368 YTAMIN---GYCKEDKLNR----AEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAY 420
Query: 331 KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL 390
+L MG+ G PN T+ +I L + + E +++++ G Y ++
Sbjct: 421 ELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVH 480
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C +++ F KM G PD +Y L++ +C ++ ++ LF+EAV G+
Sbjct: 481 CRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTK 540
Query: 451 KEYRVD----PRYLKKPIAVK 467
K Y RY +AVK
Sbjct: 541 KTYTSMICGYCRYGNTSLAVK 561
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 132/340 (38%), Gaps = 13/340 (3%)
Query: 121 LTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKE---VLGPKTLASCIDRLVRAG 177
L N N +E + F K + +V+ + V +TL +D V G
Sbjct: 144 LIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMG 203
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKIC 236
F M + G D S +L+V C G AEK + F D+ C
Sbjct: 204 LVEIAENMFVEMCQR-GVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATC 262
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
L+I +C G ++ +M G + + +++ + K K F L
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFEL------ 316
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW-GCHPNETTFLVLIKSL 355
L +M G NV T LI LCK +E A +LF ++ G PN T+ +I
Sbjct: 317 -LEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGY 375
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ ++ + ++ RM+ G Y + C + +A + + M +G +P+
Sbjct: 376 CKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNI 435
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY+ ++ C +D+A L ++ +G++ Y +
Sbjct: 436 YTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTI 475
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 9/256 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGW 243
RM+ + G + ++ +++ C+ G A +L+ E F P+ + +I G
Sbjct: 387 LLSRMQ-EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGL 445
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G LDEA RL ++ G + V Y ++ S CR+ D R K+L
Sbjct: 446 CKKGSLDEAYRLLNKVSVHGLQADGVTYTILM---SVHCRQADTNRSLVFFNKML----K 498
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G ++ ++ LIS C+ ++ +++ +LF G P + T+ +I +
Sbjct: 499 VGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSL 558
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++ RM + G A Y ++ LC +++ A ++++ M G +P T L
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618
Query: 424 KWCAHNRVDKANALFD 439
++C + A + D
Sbjct: 619 EYCKKDDSSTAINVLD 634
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 14/309 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
GR D A+ + + ++ V P + I + R G+ + L ERM ++G D
Sbjct: 60 GRVHDVVALFERWIQDR-VYSPDVWSFNVVIKGVCRVGQVQKALELVERMN-EFGCSPDT 117
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ ++V+ LC S ++++ + P+ +I G+C GKL++A +
Sbjct: 118 VTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 177
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
+M G TV YN +++ K+ L S E V M P +V TF+ LI
Sbjct: 178 DMVASGIMPNTVTYNVLINGYGKV------GDLGSAVE-VYQQMTRLRCPPDVVTFSSLI 230
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK-SAGY 376
C+ + +DA++++ M + PN TF ++I SL + R E +++ +
Sbjct: 231 DGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDI 290
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
A Y + LC ++++A + + M+ G PD TY +L+ +C +R+ +A
Sbjct: 291 APQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIM 350
Query: 437 LFDEAVRNG 445
F E V G
Sbjct: 351 FFHEMVEAG 359
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 7/214 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + L+ LD + L + G + AYN ++ + R D L
Sbjct: 9 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL 68
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
E+ + D Y+ +V +FNV+I +C++ + + A++L RM E+GC P+ T +
Sbjct: 69 ---FERWIQDRVYS---PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNI 122
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAI-GKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
L+ L + V G E++ R++ G + + ++ C ++E AM+V+ M
Sbjct: 123 LVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVAS 182
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
G P++ TY++L+ + + A ++ + R
Sbjct: 183 GIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 216
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 99/236 (41%), Gaps = 11/236 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ +D A+++ +V + + T I+ + G + +++M R D +
Sbjct: 167 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR-LRCPPDVVT 225
Query: 202 LRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM- 259
+++ C G A ++ D A + I P+ ++I C + DEA L E+
Sbjct: 226 FSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELN 285
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
R YN ++D + K C K D EA + ME G + T+ +LI
Sbjct: 286 LRPDIAPQAFIYNPVIDVLCK-CGKVD------EANLIRKGMEEKGCRPDKYTYTILIIG 338
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
C R +AI F+ M E GC P+ T I L +A E D ++ R+ S G
Sbjct: 339 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM-RLASGG 393
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR-MKSAGYAIGKKDYYEFLTRL 390
L + E+GC + L+ SL RV + + +R ++ Y+ + + +
Sbjct: 33 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 92
Query: 391 CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
C + ++++A+ + E+M G +PD+ T+++L+ C N V + + + R+GV
Sbjct: 93 CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGV 148
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 18/278 (6%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDK 234
R G ++ L F+ M G K+ + L+ + LC+ G +AEK++ +E+
Sbjct: 328 RKGHCSEALKLFDEMVSK-GIKQTVVTYNLIAKALCKEGEMEHAEKIL----DEMLLAGM 382
Query: 235 I--CDLL--IKGWCV--DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ C L + W + G+LD RL REM + C+ +LC+
Sbjct: 383 MVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTA---CIQELCKSGK-- 437
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA ++ + G+ NV T N LI LC+ ++A K+ M G + T+
Sbjct: 438 --HEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITY 495
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
++I+ +A+++ E ++ D M G+ + FL C + ++E+ + + ++MK+
Sbjct: 496 NIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKS 555
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+G PD TY ++ +C + KAN E ++NG+
Sbjct: 556 EGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGL 593
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 10/233 (4%)
Query: 218 AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA--YNCIL 275
A+ ++ +A P K C +L++ G+LD A+++ EM G TVA +
Sbjct: 160 ADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGK----TVAPDVHTYT 215
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ LCR + +D+ A +L ++ +G+ V T+NVL+ LCK R E+A +L R
Sbjct: 216 AMIKALCRAGE---IDA-AFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGR 271
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E P+ TF +LI L + + GE ++ M+ G + Y E + C
Sbjct: 272 MVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGH 331
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+A+ +F++M + G TY+L+ C ++ A + DE + G+ V
Sbjct: 332 CSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 131/318 (41%), Gaps = 46/318 (14%)
Query: 166 LASCIDRLVRAGRPTQVLG-FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ +CI L ++G+ + +F+ + + G + + ++ LC+ A K++K
Sbjct: 425 MTACIQELCKSGKHEEAAEIWFQVLGKGLGV--NVATSNALIHGLCQGNNMKEATKVLKA 482
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFE---------------LG- 267
N D+I +++I+G C K+DEA +L +M + GF+ LG
Sbjct: 483 MVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGK 542
Query: 268 -------------------TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
V Y I+D C+ KD + A + L ++ NG+
Sbjct: 543 VEEILHLLDQMKSEGLKPDIVTYGTIID---GYCKAKDMHK----ANEYLTELMKNGLRP 595
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N +N LI + DAI + M G P T+ L+ + A V E +
Sbjct: 596 NAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVF 655
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ +G Y + C I +I++A+ F++M + G P+ TY LM +
Sbjct: 656 AQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKS 715
Query: 429 NRVDKANALFDEAVRNGV 446
++A+ LFDE V G+
Sbjct: 716 GNKEEASKLFDEMVSLGI 733
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 9/263 (3%)
Query: 195 FKRDKDSLRLV-VEKLCENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
F + D+L +++LC++G + AE + + + + LI G C + EA
Sbjct: 417 FLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEA 476
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ + M G EL + YN ++ K + + +L DM G ++ T
Sbjct: 477 TKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD-------DMIKRGFKPDLFT 529
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN+ + C + + E+ + L +M G P+ T+ +I +A + + +E + +
Sbjct: 530 FNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELM 589
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + I A+ + + MK +G P TY+ LM C V+
Sbjct: 590 KNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVE 649
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
+ A+F + + +E+ Y +
Sbjct: 650 EVKAVFAQCIVKDIELGVIGYTI 672
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 13/263 (4%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKI 235
G+ ++L ++M+ + G K D + +++ C+ A E L + N + P+ I
Sbjct: 541 GKVEEILHLLDQMKSE-GLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVI 599
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ LI G+ +G + +A + M G + V YN ++ +C L E +
Sbjct: 600 YNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLM---YWMCHAG----LVEEVK 652
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
V + V + ++I CKI + ++A+ F M G PN+ T+ L+ +
Sbjct: 653 AVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAY 712
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
++ E ++ D M S G Y ++ C ++ +++ + +M + D
Sbjct: 713 SKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDG 772
Query: 416 ETY----DLLMTKWCAHNRVDKA 434
+Y D + T WC V A
Sbjct: 773 CSYNAFVDGITTPWCQKEAVSNA 795
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 130/357 (36%), Gaps = 72/357 (20%)
Query: 171 DRLVRAGRPTQVLGFFERMERDY------GFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
D LVRA + G R + G + ++VE L G A K+ +
Sbjct: 141 DLLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGE 200
Query: 225 T--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ PD +IK C G++D A + E+ R G + V YN ++D + K
Sbjct: 201 MRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSG 260
Query: 283 RKKDPFRLDS----------------------------EAEKVLLDMEYNGVPRNVETFN 314
R ++ FRL E VL +M+ G+ N +N
Sbjct: 261 RVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYN 320
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
+I C+ +A+KLF M G T+ ++ K+L + + ++++D M A
Sbjct: 321 EMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLA 380
Query: 375 GYAI----------------GKKDYY-----EFLTR---------------LCGIERIEQ 398
G + G+ D E L R LC + E+
Sbjct: 381 GMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEE 440
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A ++ ++ G + T + L+ C N + +A + V +GVE+ Y +
Sbjct: 441 AAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNI 497
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I + G +D+A + +EM G V +N ++ SKL + A+
Sbjct: 425 NMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHN-------AKA 477
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
VL + +G+ ++ TF LI+ LC + +DA F M EWG PN T+ VL+ +L
Sbjct: 478 VLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALC 537
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
A V + +++++MK G + + C ++++++A ++F M G PD+
Sbjct: 538 SAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNY 597
Query: 417 TYDLLMTKWCAHNRVDKANALF 438
TY+ L+ C R+D+A +
Sbjct: 598 TYNSLIKALCDERRIDEAKEIL 619
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 7/197 (3%)
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
+A + M G G +YN ++DC K +D AE ++ +M GV N
Sbjct: 403 SKANHYLKRMVLDGLLSGVTSYNMVIDCFVK------AGAVDKAAE-IIKEMREKGVLPN 455
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
+ TFN LIS K+ +A + + E G P+ TF LI L ++ + + +
Sbjct: 456 LVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFN 515
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
M G Y + LC + +A+ + KMK DG PD+ +++ + +C
Sbjct: 516 EMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMK 575
Query: 430 RVDKANALFDEAVRNGV 446
+VDKA +F+ +R GV
Sbjct: 576 KVDKARNIFNAMLRLGV 592
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 118/307 (38%), Gaps = 32/307 (10%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL--CENGYASYAEKLVKDTAN 227
+D AGRP + F+ M ++ G ++ S R +V C + +Y L +
Sbjct: 253 VDGFCNAGRPEDAVHVFDTM-KEKGVSPNEASYRTLVHGAFRCLGRHKAYV-MLTEWLGR 310
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC------VSKL 281
E P ++ + E + ++M G+ L + ++ C +S L
Sbjct: 311 EPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDL 370
Query: 282 CRKKDPF----------------------RLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
C D F + S+A L M +G+ V ++N++I
Sbjct: 371 CGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDC 430
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
K + A ++ M E G PN TF LI + V ++ + G
Sbjct: 431 FVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPD 490
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ + LC +++ A F +M G P++ TY++LM C+ V+KA L +
Sbjct: 491 IITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLN 550
Query: 440 EAVRNGV 446
+ ++G+
Sbjct: 551 KMKKDGI 557
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 10/272 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
+ +RM D G S +V++ + G A +++K+ + + P+ + LI G+
Sbjct: 408 YLKRMVLD-GLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGY 466
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
G + AK + + + G + + +++ + + D F +E M
Sbjct: 467 SKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNE-------MAE 519
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
GV N T+NVL+ LC AI L +M + G P+ +F I S + +V +
Sbjct: 520 WGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDK 579
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL-LM 422
+ + M G Y + LC RI++A + M++ G + + L ++
Sbjct: 580 ARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGSSATTHHTHLPIV 639
Query: 423 TKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
+ + KA L ++ R V++ R
Sbjct: 640 SALTKTGQFSKAGQLMNKYNRRNVQLSCGSNR 671
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 12/258 (4%)
Query: 191 RDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKL 249
R G + ++ LR ++ G A YA E V+ + P + + LI G +
Sbjct: 133 RGCGCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAV 192
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
D A ++M G + YN + V +C++ + EA +++ ME G+ N
Sbjct: 193 DTAYLRFQQMPADGCQPDCFTYNTL---VHGVCQRG----IIDEALRLVRQMEGAGIRPN 245
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
V T+ +L+ C R EDA+ +F M E G PNE ++ L+ ++ + M+
Sbjct: 246 VFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLT 305
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
+ L L E ++ + V +KM + G+ D+ + ++++ CA
Sbjct: 306 EWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVS--CAVK 363
Query: 430 RVDKAN--ALFDEAVRNG 445
++ ++ L D+ V+ G
Sbjct: 364 CLELSDLCGLLDDFVKKG 381
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%)
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
E LI++ ++ ++ A ++F +M G P+ + LI + +A V +
Sbjct: 142 ELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQ 201
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M + G Y + +C I++A+ + +M+ G P+ TY +L+ +C R
Sbjct: 202 MPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGR 261
Query: 431 VDKANALFDEAVRNGVEVKPKEYR 454
+ A +FD GV YR
Sbjct: 262 PEDAVHVFDTMKEKGVSPNEASYR 285
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 134/293 (45%), Gaps = 9/293 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + L +GR + + F M R+ G + + + +++ +C+ +++
Sbjct: 75 RTYTVIVHALFESGRRMEAINLFSEM-RERGCEPNIHTYTVMINAMCKETKLEEGRRILD 133
Query: 224 DTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + + P + LI G+C +G ++ A+ + M+ YN + + C
Sbjct: 134 EMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYN---ELICGFC 190
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
RKK+ R A +L M + + +V T+N LI CKI + A +L M E G
Sbjct: 191 RKKNVHR----AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVV 246
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P++ T+ V I +L + R+ E + + + +K G + Y + C +++ A S+
Sbjct: 247 PDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSL 306
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++M T+ P+S TY+ L+ C +V +A L + ++ G++ Y +
Sbjct: 307 LDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 109/268 (40%), Gaps = 8/268 (2%)
Query: 205 VVEKLCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ C+ GY A +L+ N + PD + I C G+++EA L + G
Sbjct: 220 LIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG 279
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V Y ++D K + D A +L M N T+N LI LCK
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDD-------ANSLLDRMLTEDCLPNSSTYNALIDGLCKE 332
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R+ ++A+ L M + G T+ +LI ++ + ++D+M S+GY Y
Sbjct: 333 RKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIY 392
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
F+ C I++A + M G PD+ TY L++ + ++ A +
Sbjct: 393 TAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFD 452
Query: 444 NGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
G + Y ++L K KK K
Sbjct: 453 TGCDPSHHTYSCLIKHLLKEELTKKYKN 480
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 131/327 (40%), Gaps = 24/327 (7%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G+ D ++ D ++ + T + ID L + + + L E M + G K +
Sbjct: 298 GKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK-GLKCTVPT 356
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ + + G YA +++ + + PD I I +C G + EA+ + M+
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRL-----DSEAE----------KVLLDMEYNG 305
G + Y ++D L F + D+ + K LL E
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTK 476
Query: 306 VPRNV-------ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+NV F ++++ K+ + E A++LF +M E GC PN T+ LI L +
Sbjct: 477 KYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKV 536
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R+G ++ D M G + + Y L C + A+ + M GH P E+
Sbjct: 537 GRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESL 596
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNG 445
++L +KA +F ++ G
Sbjct: 597 NVLFCGLYEEGSKEKAKVVFSNLLQCG 623
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 239 LIKGWCVDGKLDEAK---------RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
++ G+C G L EA + M + G V+Y + + LC + R
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYT---NLIHGLC---EVGR 54
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+D E + M + V T+ V++ L + R +AI LF M E GC PN T+
Sbjct: 55 VD-EGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYT 113
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
V+I ++ + ++ EG ++D M G Y + C +E A + + M ++
Sbjct: 114 VMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSN 173
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
NP+ TY+ L+ +C V +A AL + + +
Sbjct: 174 SCNPNERTYNELICGFCRKKNVHRAMALLSKMLES 208
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G RN ++ LI LC++ R ++ I +F +M E C+P T+ V++ +L+++ R E
Sbjct: 34 GCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEA 93
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ M+ G Y + +C ++E+ + ++M G P TY+ L+
Sbjct: 94 INLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDG 153
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+C V+ A + D N + Y
Sbjct: 154 YCKEGMVEAAQEILDLMHSNSCNPNERTY 182
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 123/314 (39%), Gaps = 52/314 (16%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID L + GR + F + ++ G K ++ +++ C+ G A L+ E
Sbjct: 256 IDTLCKKGRIEEANVLFNSL-KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ + LI G C + K+ EA L M + G + Y ++ V+ L K+ F
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILI--VAML--KEGDF 370
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC---KIRRSEDAIKLFY----------- 334
A ++L M +G +V + I C I+ +ED + + +
Sbjct: 371 ---DYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTY 427
Query: 335 ---------------------RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
RM + GC P+ T+ LIK L + +E+ + K+
Sbjct: 428 TLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLK-------EELTKKYKN 480
Query: 374 AGYAIGKKD-YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ ++ + + + + E A+ +FEKM G +P+ TY L+ C R+
Sbjct: 481 VALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLG 540
Query: 433 KANALFDEAVRNGV 446
A LFD GV
Sbjct: 541 VAQKLFDHMNERGV 554
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G C G+L A++L M G YN +L+C +L D RL
Sbjct: 529 LIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAM---- 584
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME+ +P +E+ NVL L + E A +F + + G + +E + +LI L +
Sbjct: 585 --MEHGHLPL-LESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKN 641
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
E++ M++ G I + Y + L G
Sbjct: 642 GLSDGCSELLGVMEARGCQIHPQTYRMLIEGLDG 675
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + LC + R+++ +++F+KM+ D P TY +++ R +A LF E
Sbjct: 42 YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR 101
Query: 443 RNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
G E Y V + K +++G++
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRR 130
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 126/275 (45%), Gaps = 9/275 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I+ L + G G F++M + G + D + +++ LC++ + A +
Sbjct: 12 TYTTIINGLCKIGETVAAAGLFKKMG-EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSY 70
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A I P+ + LI+G C + EA + EM V ++ +++ C+
Sbjct: 71 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI---FCK 127
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + F EA VL M GV NV T++ L++ +A KLF M GC P
Sbjct: 128 EGNVF----EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ +LI +A R+GE ++ + M G Y + LC + R+ +A +F
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ M T+G+ PD TY +L+ +C + KA LF
Sbjct: 244 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLF 278
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 9/292 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ ID L + R + L F M+ G + + +++ LC A ++ +
Sbjct: 47 TYSTIIDSLCKDRRVNEALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNE 105
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I P+ LLI +C +G + EA+ + + M G E V Y+ +++ S
Sbjct: 106 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYS---L 162
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + F EA K+ M G +V ++N+LI+ CK +R +A +LF M G P
Sbjct: 163 QAEVF----EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTP 218
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ ++ LI L Q R+ E ++ M + G Y L C + +A +F
Sbjct: 219 DIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLF 278
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
M++ P+ Y++L+ C + +A LF E G++ K +++
Sbjct: 279 RAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKL 330
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 7/216 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +I G C G+ A L ++M G + V Y+ I+D LC+ R
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIID---SLCKD----RR 60
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+EA + M+ G+ N+ T+N LI LC R +A + M PN TF +
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI + V E ++ M G Y + + +A +F+ M T G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD +Y++L+ +C R+ +A LF+E + G+
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 105/253 (41%), Gaps = 8/253 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G++ D + ++ LC+ G A L K PD +I C D +++EA
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ M G YN ++ + R + EA +L +M + N+ T
Sbjct: 65 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR-------EASAMLNEMMSLNIMPNIVT 117
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
F++LI+ CK +A + M E G PN T+ L+ A V E ++ D M
Sbjct: 118 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMI 177
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G Y + C +RI +A +F +M G PD +Y+ L+ C R+
Sbjct: 178 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 237
Query: 433 KANALFDEAVRNG 445
+A+ LF + NG
Sbjct: 238 EAHDLFKNMLTNG 250
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +V T+ +I+ LCKI + A LF +MGE GC P+ T+ +I SL + RV E
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
++ MK+ G + Y + LC R +A ++ +M + P+ T+ LL+
Sbjct: 65 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124
Query: 425 WCAHNRVDKANALFDEAVRNGVE 447
+C V +A + GVE
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVE 147
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +V T++ +I +LCK RR +A+ +F M G PN T+ LI+ L +R E
Sbjct: 40 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 99
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
M++ M S + + C + +A V + M G P+ TY LM
Sbjct: 100 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 159
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ V +A LFD + G + Y +
Sbjct: 160 YSLQAEVFEARKLFDVMITKGCKPDVFSYNI 190
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 144/325 (44%), Gaps = 14/325 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I+ L + G+ + F ME G K + + +V C +G A+ ++ +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETS-GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI G C G+L+EA ++ EM + G V YN ++D C K +
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID---GFCNKGN-- 341
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
LD A +M G+ + T+N LI L +R+++A + + E G P+ T+
Sbjct: 342 -LDM-ASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI + A + + D M ++G KK Y L L R+++A +F+K+ +
Sbjct: 400 NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
+G PD ++ L+ C+++ V A L + R ++V P E + K
Sbjct: 460 EGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDR--MKVPPDEVTFNTIMQGHCREGKV 517
Query: 469 GKKRETLPEKMARKRRRLKQIRLSF 493
+ RE E KRR +K +SF
Sbjct: 518 EEARELFDE---MKRRGIKPDHISF 539
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++I C +GKL +AK M G + V YN I V C R+++ A+
Sbjct: 225 NIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI---VHGYCSSG---RVEA-ADA 277
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L M+ + + T+ LIS +CK R E+A K+F M + G P+ + LI
Sbjct: 278 ILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC 337
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ D M G + Y + L +R ++A + ++++ G +PD+
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAI 397
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
TY++L+ +C KA L DE + +G++ K Y
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTY 434
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 100/233 (42%), Gaps = 14/233 (6%)
Query: 218 AEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
AE ++K+ + I PD ++LI G+C +A L EM G + Y +L
Sbjct: 380 AECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLH 439
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+SK R K EA+ + + GV +V FN LI C + A +L M
Sbjct: 440 VLSKKNRMK-------EADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER- 395
P+E TF +++ + +V E E+ D MK G K D+ F T + G R
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI---KPDHISFNTLISGYSRR 549
Query: 396 --IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
I+ A V +M G NP TY+ L+ C + D A L E V G+
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
F + D LIK C + DEA M G N +L KL R + +
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
L +E ++ + +V TFN++I+ LCK + + A M G PN T+
Sbjct: 208 LYAEMFRL-------RIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYN 260
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++ + RV D ++ MK Y ++ +C R+E+A +FE+M
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P + Y+ L+ +C +D A+A DE ++ G+
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+HD ++ + KT S + L + R + F+++ + G D +++
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLPDVIMFNALIDGH 476
Query: 210 CENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C N A +L+KD ++ PD+ + +++G C +GK++EA+ L EM R G +
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+++N ++ S+ KD FR+ +E +LD +N V T+N L+ LCK + +
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNE----MLDTGFNPT---VLTYNALVQGLCKNQEGDL 589
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
A +L M G P++TT+ LI+ + A+V DE
Sbjct: 590 AEELLKEMVSKGMTPDDTTYFTLIEGI---AKVNIPDE 624
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ +++ LC+ G A+ V + + P+ + ++ G+C G+++ A + M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
R E + Y + +S +C++ RL+ EA K+ +M G+ + +N LI
Sbjct: 283 KRQKIEPDSFTYGSL---ISGMCKQG---RLE-EASKIFEEMVQKGLRPSAVIYNTLIDG 335
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C + A M + G P +T+ LI +L+ R E + MI ++ G +
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + C ++A + ++M G P +TY L+ NR+ +A+ LF
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455
Query: 440 EAVRNGV 446
+ GV
Sbjct: 456 KITSEGV 462
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 12/235 (5%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+++VK+ + P+ LI G C +G++DEA + EM G E Y +
Sbjct: 257 DRMVKEGCD---PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP---I 310
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
+ LC + + EA +++ M+ G NV+T+ LIS L ++ + E AI L+++M +
Sbjct: 311 TALCAIEH----EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G PN T+ LI L R ++ M+ G + Y E + LC IE+
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
AM +FEKM G P TY+ L+ + V+ A L D NG E P E+
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE--PDEW 479
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 124/295 (42%), Gaps = 17/295 (5%)
Query: 158 KEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
KE L P T+ + I+ L GR + L F ME +G + + +++ LC G
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGSLANTQTYNEIIKGLCLGGDI 424
Query: 216 SYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
A EK++K P + LI G+ G ++ A RL M G E Y
Sbjct: 425 EKAMVLFEKMLKMGP---LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N ++ SK + L+S A +M G+ N ++ LI K + + A+
Sbjct: 482 NELVSGFSKWGK------LES-ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALS 534
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
L RM E GC+PN ++ +I L + R E +++ D+M G Y + LC
Sbjct: 535 LLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLC 594
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
R + A +F M+ P+ TY L+ C + D+A L E R G+
Sbjct: 595 RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 649
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G DGK+D A L + M G +YN +++ +SK ++ F SEAEK+
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK----ENRF---SEAEKIC 571
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G+ NV T+ LI LC+ R++ A K+F+ M + C PN T+ LI L Q
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E + ++ M+ G A + + + + RI+ A + +M G P+ TY
Sbjct: 632 GKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTY 691
Query: 419 DLLM 422
+L+
Sbjct: 692 SVLL 695
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 121/299 (40%), Gaps = 9/299 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ L GR + L E M + G + + L + LC + A +LV
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEM-IEKGIEPTVYTYTLPITALCAIEHEEEAIELVAR 328
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ + LI G GKL+ A L +M + G TV YN + +++LC
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL---INELCV 385
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
S A K+ ME +G N +T+N +I LC E A+ LF +M + G P
Sbjct: 386 GGR----FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP 441
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ LI V ++D MK G + Y E ++ ++E A F
Sbjct: 442 TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYF 501
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
++M G NP+ +Y L+ +VD A +L G + Y L K
Sbjct: 502 QEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI---------FPDD 233
+ R+ RD F D +R+++ K C N + V D NEI + +
Sbjct: 112 ISMLNRLVRDRVFA-PADHIRILMIKACRN---EEEIRRVADFLNEISGMGFGFSLYSCN 167
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ L K V+G A+ L ++M G + + +N +++ +SK K R E
Sbjct: 168 TLLIQLAKFEMVEG----ARNLYKQMLNSGIQPSLLTFNTLINILSK----KGKVR---E 216
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
AE +L + + +V T+ LI C+ R + A +F RM + GC PN T+ LI
Sbjct: 217 AELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLIN 276
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L RV E +M++ M G Y +T LC IE E+A+ + +MK G P
Sbjct: 277 GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRP 336
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ +TY L++ +++ A L+ + ++ G+
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K CR ++ R L ++ G ++ + N L+ L K E A L+ +M
Sbjct: 136 KACRNEEEIR---RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ TF LI L + +V E + ++ ++ + Y + C ++ A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
VF++M +G +P+S TY L+ C RVD+A + +E + G+E
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 9/194 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P + + ID + G+ L +RME + G + +S V+ L + S AEK+
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRME-EMGCNPNVESYNAVINGLSKENRFSEAEKIC 571
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ + P+ LI G C +G+ A ++ +M + Y+ + + L
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL---IYGL 628
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C++ EAE +L +ME G+ + TF LI + R + A L RM + GC
Sbjct: 629 CQEGKA----DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGC 684
Query: 342 HPNETTFLVLIKSL 355
PN T+ VL+K L
Sbjct: 685 KPNYRTYSVLLKGL 698
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 22/267 (8%)
Query: 161 LGPKTLASCIDRLVRAGRPTQ-VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
L P+ A + +V + T+ V+ FF + + +K + N + S
Sbjct: 69 LSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNM------------NCFISMLN 116
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+LV+D P D I L+IK + ++ E+ GF + N +L ++
Sbjct: 117 RLVRDRV--FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLA 174
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K F + A + M +G+ ++ TFN LI+ L K + +A + ++ ++
Sbjct: 175 K-------FEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQY 227
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
P+ T+ LI + + + DRM G Y + LC R+++A
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ + E+M G P TY L +T C
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALC 314
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 19/295 (6%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+ ID L ++G + +FE+M D G + ++ LC AE+L+ +
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE-- 471
Query: 227 NEIFPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
D IC + +I C +G++ E+++L M R G + + YN ++D
Sbjct: 472 ---MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC- 527
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
L K D EA K+L M GV ++ T+ LI+ C++ R +DA+ LF M G
Sbjct: 528 LAGKMD------EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ ++++ L+ R E+ + +G + Y L LC ++A+
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+F+ + ++ T+++++ R+D+A LF NG+ + Y +
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 137/320 (42%), Gaps = 30/320 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S ++ L + GR T+ F+ M + G + D + R +++ G L+
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTK-RGLEPDIATYRTLLQGYATKGALVEMHALLDL 366
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N I PD + ++LI + K+D+A + +M + G V Y ++D + K
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 284 KKDPF-----RLDS-----------------------EAEKVLLDMEYNGVPRNVETFNV 315
D +D +AE+++L+M G+ N FN
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I + CK R ++ KLF M G P+ T+ LI A ++ E +++ M S G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + C + R++ A+++F++M + G +P+ TY++++ R A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
L+ ++G +++ Y +
Sbjct: 607 ELYVSITKSGTQLELSTYNI 626
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 9/276 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLL 239
Q + F +M R +G + V++ LC++G A + +E + P+ + L
Sbjct: 394 QAMLVFSKM-RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
I G C K D+A+ L EM G L T+ +N I+D K R E+EK+
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI-------ESEKLFD 505
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M GV ++ T+N LI C + ++A KL M G P+ T+ LI + +
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ + + M S+G + Y L L R A ++ + G + TY+
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+++ C +N D+A +F ++++ + + +
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 15/289 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T A I RAGR + + GF+ D + +++ LC + S A +V
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKK-GFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152
Query: 225 TANEI--FPDDKICDLLIKGWCVDGKLDEAKRLAREMY---RGGFELGTVAYNCILDCVS 279
E+ PD + L+KG C + + EA L M GG V+YN +L+
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 280 KLCRKKDPFRLDSE-AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
K DS+ A +M G+ +V T++ +I+ LCK + + A+++ M +
Sbjct: 213 K--------EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P+ T+ ++ + + E + +M+S G Y + LC R +
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
A +F+ M G PD TY L+ + + + +AL D VRNG++
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 239 LIKGWCVDGKLDEAKRLA-REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+KG C D + +A + R M G +YN +L + R ++ L +
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL----LHM 188
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ D G P +V ++N +++ K S+ A ++ M + G P+ T+ +I +L +
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
A + + E+++ M G Y L C + ++A+ +KM++DG P+ T
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
Y LM C + R +A +FD + G+E YR
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 345
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 8/248 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G +EKL + PD + LI G C+ GK+DEA +L M G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V Y +++ ++ R D L E M +GV N+ T+N+++ L
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKE-------MVSSGVSPNIITYNIILQGLFHT 599
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR+ A +L+ + + G +T+ +++ L + E M + + + +
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ L R+++A +F +G PD TY L+ +++ + LF
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719
Query: 444 NGVEVKPK 451
NG +
Sbjct: 720 NGCSADSR 727
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 9/269 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ID + GR + F+ M R G K D + +++ C G A KL+ +
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD LI G+C ++D+A L +EM G + YN IL +
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT----- 599
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + A+++ + + +G + T+N+++ LCK +++A+++F +
Sbjct: 600 --RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
TF ++I +L + R+ E ++ + G + Y L +E+ +F M
Sbjct: 658 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 717
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ +G + DS + ++ K + +A
Sbjct: 718 EENGCSADSRMLNSIVRKLLQRGDITRAG 746
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 41/304 (13%)
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF 230
D L+R GR + YG R V + S ++ + A ++
Sbjct: 44 DELLRRGRGASI----------YGLNRALAD----VARHSPAAAVSRYNRMARAGAGKVT 89
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P +LI C G+LD + + GF + + + +L LC K R
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLL---KGLCADK---RT 143
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE---WGCHPNETT 347
+ VL M G +V ++N L+ LC RS++A++L + M + G P+ +
Sbjct: 144 SDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203
Query: 348 FLVLIKSLYQAARVGEGD---------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
+ ++ ++ EGD EM+DR G Y + LC + +++
Sbjct: 204 YNTVLNGFFK-----EGDSDKAYSTYHEMLDR----GILPDVVTYSSIIAALCKAQAMDK 254
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR 458
AM V M +G PD TY+ ++ +C+ + +A + +GVE Y
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 314
Query: 459 YLKK 462
YL K
Sbjct: 315 YLCK 318
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 161/392 (41%), Gaps = 50/392 (12%)
Query: 105 NFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK 164
+ E ++ +N + + DE L F D K ++A H +V+
Sbjct: 59 SMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDM---EKRYEASHGC---EPDVISYS 112
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ ID L +A R + +F+RM R G + + +++ LC+ A L+
Sbjct: 113 TV---IDALCKAQRVDKAYEYFKRM-RAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQ 168
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV----- 278
E + P + ++ G+ GK E L M GF + + +N +L +
Sbjct: 169 LKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 228
Query: 279 -SKLCR--------KKDPFRLD--------------SEAEKVLLDMEYNGVPRNVETFNV 315
K C+ K P + EA ++LL+M + V +V T++
Sbjct: 229 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSS 288
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I CK R + A +F RM C P+ TF+ L+ + + E + + M +AG
Sbjct: 289 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 348
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ G + Y + +CG + +E A+ ++ KMK PD+ TY L+ C RVD+A
Sbjct: 349 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAK 408
Query: 436 ALF-----DEAVRNG------VEVKPKEYRVD 456
D V NG VEV K+ VD
Sbjct: 409 EFLDVMEADNVVPNGAICHALVEVLCKQGEVD 440
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 13/282 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ +AG+ Q + M ++ G K D +++ LC G A + K E
Sbjct: 6 INGFCKAGQVDQAFELLDEM-KERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC 64
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYR-----GGFELGTVAYNCILDCVSKLCRK 284
P+ + ++ G C ++DE L +M + G E ++Y+ ++D LC+
Sbjct: 65 SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVID---ALCKA 121
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ R+D +A + M G NV T++ LI LCK+ R ++A L ++ P
Sbjct: 122 Q---RVD-KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ ++ + + E E++ MK G+ I D+ L L + E+A FE
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++ G P+ TY++ + C +VD+A + E V + V
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKV 279
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+I G+C G++D+A L EM G ++ + ++ + + LCRK R+D EA +
Sbjct: 5 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTL---IQGLCRKG---RID-EALEQF 57
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM-----GEWGCHPNETTFLVLIK 353
M P NV T+N +++ LCK R ++ ++LF M GC P+ ++ +I
Sbjct: 58 KSMGEECSP-NVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVID 116
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+L +A RV + E RM++ G A Y + LC ++R+++A S+ ++K + P
Sbjct: 117 ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVP 176
Query: 414 DSETYDLLMTKW 425
+ Y+ ++ +
Sbjct: 177 RAMYYNAVVNGF 188
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 135/325 (41%), Gaps = 63/325 (19%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVKDTANEIFPDDKICDLLIKGW 243
FFER+ + G K + + + V LC+ G A + L++ +++ PD +I G+
Sbjct: 235 FFERLLKS-GKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGF 293
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G++D+A + M V + +L S+ + ++ FR+ DM
Sbjct: 294 CKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE-------DMVN 346
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV-- 361
G ++T+NVL+ +C E A++++++M P+ T+ LI+ L +A RV
Sbjct: 347 AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDE 406
Query: 362 ------------------------------GEGDE----------------------MID 369
GE DE +I+
Sbjct: 407 AKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIE 466
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
+M G + Y L LCG++R++ A++ FEKM + G P TY LL+ + C+ +
Sbjct: 467 QMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSAD 526
Query: 430 RVDKANALFDEAVRNGVEVKPKEYR 454
D A +F+ V G + + R
Sbjct: 527 MADDAFRIFEAMVAAGFTPQAQTMR 551
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +I +A +V + E++D MK G + + + LC RI++A+ F+ M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ +P+ TY+ ++ C NR+D+ LFD+
Sbjct: 62 EEC-SPNVITYNTVVNGLCKANRIDEGLELFDD 93
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 142/326 (43%), Gaps = 19/326 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR + A+ D ++++ T + +D + + G L +ME +
Sbjct: 196 GRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVI 255
Query: 202 LRLVVEKLCENGYASYAEKL-VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+++ L ++G S A L ++ EIFPD + +I G+C+ G+ +A++L +EM
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEML 315
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
V ++ +++ K + F EAE++ +M + + T++ +I
Sbjct: 316 ERKINPDVVTFSALINAFVK----EGKFF---EAEELYDEMLPRSIIPSTVTYSSMIDGF 368
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R + A +FY GC P+ TF LI +A RV +G +++ M AG
Sbjct: 369 CKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 428
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD- 439
Y + C + + A + ++M + G P+ T + L+ C + ++ A +F
Sbjct: 429 ITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 488
Query: 440 --------EAVR--NGVEVKPKEYRV 455
+A R NGVE + Y +
Sbjct: 489 MQKSKMDIDASRPFNGVEPDVQTYNI 514
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C G L+ A+ L +EM G V N +LD + + KD + +K
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 299 LDME----YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+D++ +NGV +V+T+N+LI L + +A +L+ M G P+ T+ +I
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + +R+ E +M D M S ++ + +T C ++ + +F +M G D
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVAD 613
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ TY L+ + + +D A +F E + +GV
Sbjct: 614 AITYITLIYGFRKVDNIDGALDIFQEMISSGV 645
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 140/323 (43%), Gaps = 23/323 (7%)
Query: 133 TLSFFTDYFGRRKDFKAI-HDFLVDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T S D F ++ A H F + + P T + I RA R + M
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGK 248
+ G + + ++ C+ G + A+ L+++ ++ + P+ C+ L+ G C +GK
Sbjct: 420 -TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478
Query: 249 LDEAKRLAREMYRG-----------GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L +A + + M + G E YN ++ C + + EAE++
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILI------CGLINEGKF-LEAEEL 531
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+M + G+ + T++ +I LCK R ++A ++F MG P+ TF LI +
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCK 591
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
A V +G E+ M G Y + ++ I+ A+ +F++M + G PD+ T
Sbjct: 592 AGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTIT 651
Query: 418 YDLLMTKWCAHNRVDKANALFDE 440
++T + +++A A+ ++
Sbjct: 652 IRNMLTGLWSKEELERAVAMLED 674
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 41/289 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L R GR + + +RM D G + ++ + +V+ +C+ G A L++
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMLED-GLQPNQITYGTIVDGMCKMGDTVSALNLLR- 241
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
K++E + + V YN I+D + K R
Sbjct: 242 -----------------------KMEEVSHIIPNV---------VIYNTIIDGLWKDGRH 269
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D A + ++M+ + ++ T+N +I+ C R DA +L M E +P+
Sbjct: 270 SD-------AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPD 322
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
TF LI + + + E +E+ D M Y + C R++ A +F
Sbjct: 323 VVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFY 382
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
T G +PD T++ L+ +C RVD L E G+ Y
Sbjct: 383 LTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY 431
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 205 VVEKLCENGYASYAEKLVKDTA------------NEIFPDDKICDLLIKGWCVDGKLDEA 252
+++ LC+NG A ++ K N + PD + ++LI G +GK EA
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEA 528
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ L EM G T+ Y+ ++D LC++ RLD EA ++ M +V T
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMID---GLCKQS---RLD-EATQMFDSMGSKSFSPDVVT 581
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN LI+ CK +D ++LF MG+ G + T++ LI + + ++ M
Sbjct: 582 FNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMI 641
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
S+G LT L E +E+A+++ E ++
Sbjct: 642 SSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+L+K +C KL A ++ + GF V +N +L LC + R+ SEA
Sbjct: 121 ILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLL---HGLCVED---RI-SEA--- 170
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
LD+ + NV TF L++ LC+ R +A+ L RM E G PN+ T+ ++ + +
Sbjct: 171 -LDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYE-FLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
++ +M+ + I Y + L R A ++F +M+ PD
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAV 442
TY+ ++ +C R A L E +
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEML 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME +P N +F +L+ C + A+ F ++ + G HP TF L+ L R
Sbjct: 107 MEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDR 166
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E ++ +M + + LC R+ +A+++ ++M DG P+ TY
Sbjct: 167 ISEALDLFHQMCKPNVVT----FTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 222
Query: 421 LMTKWC 426
++ C
Sbjct: 223 IVDGMC 228
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +C LI+ C G+ +A R+ R G + AYN + V+ CR RL
Sbjct: 72 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTL---VAGYCRYG---RL 125
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+ A +++ M VP + T+ +I LC R DA+ L M + GC P+ T+ V
Sbjct: 126 DA-ARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTV 181
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L++++ +++ GE ++D M++ G Y + +C R++ A + ++ + G
Sbjct: 182 LLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYG 241
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
PD +Y ++ CA R D LF E V
Sbjct: 242 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMV 273
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 35/316 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
I+ + + GR F M YG D S V+ LC G +A++L+ + +
Sbjct: 323 INAICKQGRVDDAYDFLNNMGM-YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 381
Query: 230 FPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD--CV-------- 278
P +++ + I C G +++A +L M G +G V YN ++ CV
Sbjct: 382 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 441
Query: 279 -------------------SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+ LC + RLD+ AE +L M P N TFNVL+S
Sbjct: 442 ELFNNLPCEPNTITYTTLLTGLCHAE---RLDAAAE-LLAGMIQKDCPLNAVTFNVLVSF 497
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
C+ E+A++L +M E GC PN TF L+ + + E E++ + S G ++
Sbjct: 498 FCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD 557
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y + L +R E+A+ + ++ G P Y+ ++ C D+A F
Sbjct: 558 TITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFA 617
Query: 440 EAVRNGVEVKPKEYRV 455
V NG Y +
Sbjct: 618 YMVSNGCMPNESTYII 633
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 30/292 (10%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN-GYASYAEKLVKDTANEIFPDDKI 235
GR L + M + G + + +++E +C++ G+ L + A P+
Sbjct: 155 GRVGDALALLDDMLQR-GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVT 213
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE-- 293
+++I G C +G++D+AK + + GF+ V+Y +L + R D L +E
Sbjct: 214 YNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMV 273
Query: 294 --------------------------AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
A +VL M +G N N++I+ +CK R +
Sbjct: 274 DKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVD 333
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
DA MG +GC+P+ ++ +++ L +A R E++ M + + F+
Sbjct: 334 DAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFI 393
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
LC IEQA+ + E M G + TY+ L+ +C RVD A LF+
Sbjct: 394 CILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN 445
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 22/267 (8%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC G S A ++++ P D + L+ G+C G+LD A+RL M
Sbjct: 80 LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---P 136
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
Y I + LC D R+ +A +L DM G +V T+ VL+ +CK
Sbjct: 137 VPPDAYTYTPI---IRGLC---DRGRV-GDALALLDDMLQRGCQPSVVTYTVLLEAVCKS 189
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+A+ + M GC PN T+ V+I + + RV + E+++R+ S G+ Y
Sbjct: 190 SGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSY 249
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
L LC R + +F +M P+ T+D+L+ +C V++A + + +
Sbjct: 250 TTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 309
Query: 444 NG-----------VEVKPKEYRVDPRY 459
+G + K+ RVD Y
Sbjct: 310 HGCTPNTTLCNIVINAICKQGRVDDAY 336
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 147/369 (39%), Gaps = 17/369 (4%)
Query: 84 QRLHLIFSH-VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDY-- 140
Q L + H TP +L +N + GR ++ +L + +T+S+ T
Sbjct: 302 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD-FLNNMGMYGCNPDTISYTTVLRG 360
Query: 141 ---FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
GR + K + +V T + I L + G Q + E M +YG
Sbjct: 361 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP-EYGCSV 419
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ +V C G A +L + E P+ L+ G C +LD A L
Sbjct: 420 GIVTYNALVHGFCVQGRVDSALELFNNLPCE--PNTITYTTLLTGLCHAERLDAAAELLA 477
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
M + L V +N + VS C+K EA +++ M +G N+ TFN L+
Sbjct: 478 GMIQKDCPLNAVTFNVL---VSFFCQKG----FVEEAMELVNQMMEHGCTPNLITFNTLL 530
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
+ K SE+A++L + + G + T+ ++ L + R E +M+ ++ G
Sbjct: 531 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR 590
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + L LC +QA+ F M ++G P+ TY +L+ + +A +
Sbjct: 591 PKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYV 650
Query: 438 FDEAVRNGV 446
E GV
Sbjct: 651 LSELYAKGV 659
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 8/248 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEK-LVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D + ++ C+ G AE+ LV N PD+ LI G C +G+ + A
Sbjct: 316 GLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRA 375
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L E G + + YN ++ +S L EA ++ +M G+ V+T
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQ-------GLILEAAQLASEMSEKGLIPEVQT 428
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN+L++ LCK+ DA L M G P+ TF +LI ++ E++D M
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMM 488
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y L LC + E M ++ M G P+ T+++L+ C ++++D
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLD 548
Query: 433 KANALFDE 440
KA L +E
Sbjct: 549 KALGLLEE 556
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 147/354 (41%), Gaps = 14/354 (3%)
Query: 97 PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD 156
P V + + + +A+ FN ++ F HT T + G F+A+ + LVD
Sbjct: 7 PKHVTTVIRCQKDPMKALEMFNSMRKEDG-FKHTLSTYRSIIEKLGLYGKFEAMEEVLVD 65
Query: 157 NKEVLGPKTL----ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
++ +G L + R G+ + + FERM+ Y + S ++ L ++
Sbjct: 66 MRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDF-YDCEPTVFSYNAIMSILVDS 124
Query: 213 GYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
GY A K+ + I PD + +K +C + A RL M G E+ VAY
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
C ++ F+ E ++ M +GV + TFN L+ LCK ++ K
Sbjct: 185 -----CTVVGGFYEENFK--DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEK 237
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
L ++ + G PN T+ I+ L Q + M+ R+ G Y + LC
Sbjct: 238 LLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLC 297
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ ++A K+ +G PDS TY+ L+ +C V A + AV NG
Sbjct: 298 KNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNG 351
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 44/275 (16%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L G + L F G K + +++ L G A +L +
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNE-ALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASE 416
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + + P+ + ++L+ G C G + +A L + M G+ +N ++ S +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ E V++D NGV +V T+N L++ LCK + ED ++ + M E GC P
Sbjct: 477 MENAL----EILDVMMD---NGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAP 529
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF +L++SL C ++++A+ +
Sbjct: 530 NLFTFNILLESL-----------------------------------CRYHKLDKALGLL 554
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
E+MK NPD+ T+ L+ +C + +D A LF
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 129/305 (42%), Gaps = 18/305 (5%)
Query: 161 LGPKTLASCIDRLVRAGR-PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYA 218
+GP L + ++R + P + L F M ++ GFK + R ++EKL G + +
Sbjct: 1 MGPPLLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAME 60
Query: 219 EKLV---KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
E LV ++ N + + + K + GK+ EA + M E +YN I+
Sbjct: 61 EVLVDMRQNVGNHMLEGVYVGAM--KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIM 118
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ D D +A KV + M G+ +V +F + + + C+ R A++L
Sbjct: 119 SILV------DSGYFD-QAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNN 171
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M GC N + ++ Y+ EG E+ +M ++G ++ + + L LC
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGD 231
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+++ + +K+ G P+ TY+ + C +D A + + G PK V
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQG----PKPDVV 287
Query: 456 DPRYL 460
YL
Sbjct: 288 TYNYL 292
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 8/243 (3%)
Query: 206 VEKLCENGYASYAEKLVKDTANEI-FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ LC+ G A ++V ++ PD + LI G C + K EA+ ++ G
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
E + YN + ++ C+ + AE++L++ +NG + T+ LI LC
Sbjct: 318 EPDSFTYNTL---IAGYCKGG----MVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEG 370
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYY 384
+ A+ LF G PN + LIK L + E ++ M G + +
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFN 430
Query: 385 EFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
+ LC + + A + + M + G+ PD T+++L+ + +++ A + D + N
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDN 490
Query: 445 GVE 447
GV+
Sbjct: 491 GVD 493
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 9/151 (5%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + G F +ME Y + +++ E + AEKL ++
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD L++ G+C G +D + EM GF +++C LC
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINC---LCV 684
Query: 284 KKDPFRLDSEAEKVLLDMEYNG-VPRNVETF 313
+ + EA ++ M G VP V T
Sbjct: 685 EDRVY----EAAGIIHRMVQKGLVPEAVNTI 711
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 6/179 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
++L++ C KLD+A L EM V + ++D K + L + E+
Sbjct: 535 NILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
V + V + T+N++I + A KLF M + P+ T+ +++
Sbjct: 595 VYM------VSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+ V G + + M G+ + LC +R+ +A + +M G P++
Sbjct: 649 KTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 125/287 (43%), Gaps = 43/287 (14%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+ G + L+ + N I P+ +LI G C +GK+++A + R M G
Sbjct: 244 LIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKG 303
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
E + Y+ I+D C + R A +V + G+ N+ ++++LI+ CK
Sbjct: 304 VEPDIITYSAIMD---GYCLRGQVDR----ARRVFNVLRDKGIKPNIFSYSILINGYCKK 356
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG-------- 375
+ A++LF + + G P+ T+ ++ L + R+G+ ++ D M G
Sbjct: 357 KNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLH 416
Query: 376 ---------YAI-------------GKKD-----YYEFLTRLCGIERIEQAMSVFEKMKT 408
Y + ++D Y + LC +R+ +A ++FEK+ +
Sbjct: 417 STLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPS 476
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
G PD TY++++T +C D+ + + NG Y V
Sbjct: 477 IGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNV 523
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 122/278 (43%), Gaps = 30/278 (10%)
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSL----RLVVEKLCENGYASYAEKLVKDTANEI 229
++ G P V+ F + + + D++ +LV EK+CE
Sbjct: 124 LKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICE------------------ 165
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P++ + ++ G G ++ L R M +G + Y+ ++D LC+
Sbjct: 166 -PNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDA---LCKD---IN 218
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
LD+ A +L +M+ +P N+ T+N LI LCK+ + E L M +PN TF
Sbjct: 219 LDA-AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
+LI L + +V + DE++ M G Y + C ++++A VF ++
Sbjct: 278 ILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDK 337
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G P+ +Y +L+ +C + KA LF E + G++
Sbjct: 338 GIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLK 375
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 121/282 (42%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + G+ M + G + D + +++ C G A ++
Sbjct: 275 TFSILIDGLCKEGKVEDADEVMRHM-IEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNV 333
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ I P+ +LI G+C L +A +L E+ + G + TV Y+ IL + ++ R
Sbjct: 334 LRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR 393
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D A+K+ +M G ++ + L+ K E+A+ LF ++
Sbjct: 394 IGD-------AKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDT 446
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N + + V+I L + RV E + +++ S G + Y +T C ++ +
Sbjct: 447 NISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGIL 506
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
KM+ +G ++ TY+++M + N++ + + E G
Sbjct: 507 RKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 10/186 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC--DLLIKGWCVDGKLDE 251
G K D + ++ L E G A+K+ D + P IC L+ G+ G ++E
Sbjct: 373 GLKPDTVTYSTILHGLIEVGRIGDAKKIF-DEMLRVGPTPDICLHSTLLFGYFKYGLVEE 431
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L ++ R + Y + ++ LC K D R EA + + G+ +V
Sbjct: 432 AMLLFSKLERNREDTNISFYTVV---INGLC-KNDRVR---EAHAIFEKLPSIGLIPDVR 484
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+NV+I+ C+ ++ + +M + GC N T+ V+++ +++ ++ E + M
Sbjct: 485 TYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544
Query: 372 KSAGYA 377
G++
Sbjct: 545 AGRGFS 550
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANE 228
I+ + G + + E M G D + ++ +C+ G A +L+ T+
Sbjct: 214 IEATIVEGGINEAMKLLEEM-LARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR----- 283
PD ++L++ + GK DE ++L EM+ G E V Y+ + +S LCR
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL---ISSLCRFGRID 329
Query: 284 -------------------KKDPF--------RLDSEAEKVLLDMEYNGVPRNVETFNVL 316
DP RLD A ++ M NG ++ +N +
Sbjct: 330 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDL-AIGIMDYMISNGCLPDIVNYNTI 388
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
++ LCK + A+++F ++ GC PN +++ +I +L+ M+ M S G
Sbjct: 389 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGV 448
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
+ Y ++ LC +E+A+ + + M+ G P +Y++++ C R+D A
Sbjct: 449 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 508
Query: 437 LFDEAVRNGVEVKPKE 452
+F E + G +P E
Sbjct: 509 MFAEMIEKG--CRPNE 522
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 14/255 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G + +K + +++ LC G A ++K E+ PD D LI C +G+LD A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ M G V YN IL + LC+ + ++A ++ + G P NV +
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTIL---AALCKNGNA----NQALEIFNKLRGMGCPPNVSS 419
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N +IS L A+ + M G P+E T+ LI L + V E ++D M+
Sbjct: 420 YNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDME 479
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM-----TKWCA 427
+G+ Y L LC + RI+ A+ +F +M G P+ TY LL+ W
Sbjct: 480 QSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGW-R 538
Query: 428 HNRVDKANALFDEAV 442
++ AN+LF V
Sbjct: 539 TEAMELANSLFSRDV 553
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 13/236 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRD 198
FGR + ++ +++ + L P T + I L + GR +G + M + G D
Sbjct: 325 FGRIDEAISVLKVMIEKE--LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN-GCLPD 381
Query: 199 KDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAR 257
+ ++ LC+NG A+ A E K P+ + +I G A +
Sbjct: 382 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 441
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
M G + + YN ++ C LCR L EA +L DME +G V ++N+++
Sbjct: 442 AMISKGVDPDEITYNSLISC---LCRDG----LVEEAIGLLDDMEQSGFRPTVISYNIVL 494
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
LCK+RR +DAI +F M E GC PNETT+++LI+ + A E E+ + + S
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 550
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 12/283 (4%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+V + S ++ R TQVL RM + GF D + +++ LC A
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVL---NRM-KARGFLPDIVTYNIMIGSLCNRRKLGLA 191
Query: 219 EKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
K++ + P +LI+ V+G ++EA +L EM G YN I
Sbjct: 192 LKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI--- 248
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ +C++ + A +++ + G +V ++N+L+ + ++ KL M
Sbjct: 249 IRGMCKEG----MVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMF 304
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
GC PN+ T+ +LI SL + R+ E ++ M Y ++ LC R++
Sbjct: 305 SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLD 364
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
A+ + + M ++G PD Y+ ++ C + ++A +F++
Sbjct: 365 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNK 407
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +C LIKG+ +++A R+ E+ E AYN + +S C+ R+
Sbjct: 101 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAV---ISGFCKVN---RI 153
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
++ A +VL M+ G ++ T+N++I +LC R+ A+K+ ++ C P T+ +
Sbjct: 154 EA-ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTI 212
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI++ + E ++++ M + G Y + +C +E+A + + + G
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD +Y++L+ + + D+ L E G E Y +
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 317
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ LI G C G+++ A+ L EM G +L V +N ++D K + F
Sbjct: 318 IVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAF 377
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL ME G +V T+N+L S LCK+ R E+A ++ M E G PN T
Sbjct: 378 RLQD-------IMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTC 430
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
I+ Q + E + + ++ G Y + E+++QA + +M
Sbjct: 431 ATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVE 490
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
G PD TY L+ C ++VD+A LF+E + G+ K Y
Sbjct: 491 KGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTY 535
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 8/263 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
FF RM SL +VV+ LC G A++L+ + A + P + L+
Sbjct: 168 FFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNAC 227
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
V + + M R G V Y +++ + R EAEKV +M
Sbjct: 228 VVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERI-------GEAEKVYEEMCE 280
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
V +V + +IS C+ A LF M G PN TF LI + +A ++
Sbjct: 281 RNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEA 340
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ +++ M+ G + + + C +++A + + M+ G D TY++L +
Sbjct: 341 AEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILAS 400
Query: 424 KWCAHNRVDKANALFDEAVRNGV 446
C +R ++A + + V GV
Sbjct: 401 GLCKLHRYEEAKRVLNVMVEKGV 423
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 120/256 (46%), Gaps = 28/256 (10%)
Query: 206 VEKLCENGYASYAEKLVKDTANEIFPDD-KICDLLI-KGWCVDG---------KLDEAKR 254
VE LC+ + A+ N +F D K+ D ++ KG V+G K++ R
Sbjct: 115 VETLCDMLFRVCAD-------NRMFRDALKVFDYVMEKGLVVEGRSCFXKKCNKVELCVR 167
Query: 255 LAREMYRGG-FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
R M G ++G + ++D LCR+ + R A++++ +M GV V T+
Sbjct: 168 FFRRMVESGRVDIGVQSLTIVVDV---LCRRGEVGR----AKELMNEMAARGVVPTVFTY 220
Query: 314 NVLISNLCKIRRSEDAI-KLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
N L+ N C +R+ + + ++ M G + T+ +LI+ + R+GE +++ + M
Sbjct: 221 NTLL-NACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMC 279
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y ++ C + +A ++F++M G P++ T+ L++ C +++
Sbjct: 280 ERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQME 339
Query: 433 KANALFDEAVRNGVEV 448
A L +E GV++
Sbjct: 340 AAEILLEEMQCKGVDL 355
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 11/220 (5%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD-CVSKLCRKKDPFRLDSEA-E 295
+++ C G++ AK L EM G YN +L+ CV R D E +
Sbjct: 187 IVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACV---------VRKDREGVD 237
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++L ME GV ++ T+ +LI R +A K++ M E + + +I
Sbjct: 238 EILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWN 297
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+A V + D M G + ++ +C ++E A + E+M+ G + +
Sbjct: 298 CRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNV 357
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ +M +C +D+A L D R G E Y +
Sbjct: 358 VIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNI 397
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 9/273 (3%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TANEIFPDDK 234
GR L M G ++ + V+ C+ G A K+ + T E+ P+
Sbjct: 86 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 145
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
+ + LI G+C GKLD A M G + YN ++ + R + + L E
Sbjct: 146 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE- 204
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
M G+ +V T+N+LI+ CK + A+++F M G T+ LI +
Sbjct: 205 ------MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 258
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L + +V E D++ D G Y + I++A + +M+ PD
Sbjct: 259 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 318
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY+ LM C RVD+A L DE + G++
Sbjct: 319 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 351
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 12/248 (4%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
+ +++ LC G + A +L++ P+ + +I G+C G++ A + REM
Sbjct: 43 TFNIMLRHLCSAGKPARALELLRQMPR---PNAVTYNTVIAGFCSRGRVQAALDIMREMR 99
Query: 261 -RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLIS 318
RGG Y + +S C+ R+D EA KV +M G V +N LI
Sbjct: 100 ERGGIAPNQYTYGTV---ISGWCKVG---RVD-EAVKVFDEMLTKGEVKPEAVMYNALIG 152
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
C + + A+ RM E G T+ +L+ +L+ R E E+++ M G A
Sbjct: 153 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 212
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y + C +++A+ +FE M G TY L+ +V + + LF
Sbjct: 213 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 272
Query: 439 DEAVRNGV 446
DEAVR G+
Sbjct: 273 DEAVRRGI 280
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 177 GRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDK 234
G+ L + +RM ER G + L+V L +G + A +LV++ + + PD
Sbjct: 158 GKLDTALLYRDRMVER--GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 215
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
++LI G C +G + +A + M R G V Y ++ +SK + ++ +L EA
Sbjct: 216 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 275
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
+ G+ ++ +N LI++ + A ++ M + P++ T+ L++
Sbjct: 276 VR-------RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 328
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L RV E ++ID M G Y ++ ++ A+ + +M G NP
Sbjct: 329 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 388
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
TY+ L+ C + + D A + E V NG+
Sbjct: 389 LLTYNALIQGLCKNGQGDDAENMVKEMVENGI 420
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 18/240 (7%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++++ C GK A L R+M R V YN + ++ C + R+ + A
Sbjct: 45 NIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTV---IAGFCSRG---RVQA-ALD 93
Query: 297 VLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG-CHPNETTFLVLIKS 354
++ +M E G+ N T+ +IS CK+ R ++A+K+F M G P + LI
Sbjct: 94 IMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 153
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
++ DRM G A+ Y + L R +A + E+M G PD
Sbjct: 154 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPD 213
Query: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
TY++L+ C V KA +F+ R GV Y L KKG+ +ET
Sbjct: 214 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS-----KKGQVQET 268
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+P TFN+++ +LC + A++L +M PN T+ +I RV
Sbjct: 37 LPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAAL 92
Query: 366 EMIDRMKS-AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMT 423
+++ M+ G A + Y ++ C + R+++A+ VF++M T G P++ Y+ L+
Sbjct: 93 DIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 152
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+C ++D A D V GV + Y +
Sbjct: 153 GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 184
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 24/257 (9%)
Query: 150 IHDFLVDNK--------EVLGPKTLAS-------CIDRLVRAGRPTQVLGFFERMERDYG 194
+H +D + E +G K LA I+ + G + L FE M R G
Sbjct: 186 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR-RG 244
Query: 195 FKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAK 253
+ + ++ L + G +KL + I PD + + LI G +D A
Sbjct: 245 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 304
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
+ EM + V YN ++ + L R EA K++ +M G+ ++ T+
Sbjct: 305 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV-------DEARKLIDEMTKRGIQPDLVTY 357
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LIS +DA+++ M G +P T+ LI+ L + + + + M+ M
Sbjct: 358 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 417
Query: 374 AGYAIGKKDYYEFLTRL 390
G Y + L
Sbjct: 418 NGITPDDSTYISLIEGL 434
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 13/280 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I + R G + L ERM ++G D + ++V+ LC + L++ +
Sbjct: 225 IKGVCRVGNFQKALELVERMT-EFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDG 283
Query: 229 -IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P+ +I G+C G++++A + +M G TV YN +++ K
Sbjct: 284 VCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGK------- 336
Query: 288 FRLDSE-AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
LD E A ++ + P +V TF+ LI C+ + +DA++++ MG+ PN
Sbjct: 337 -ALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVY 395
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMK-SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
TF ++I SL + R E + + A A Y + LC ++E+A +
Sbjct: 396 TFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTD 455
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M+ G +PD TY +L+ C R+ +A LF + V G
Sbjct: 456 MEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETG 495
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 9/224 (4%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEI-FPDDKICDLLIKGWCVD-GKLDEAKRLAREMYRG 262
V+ LC +G A KL ++ + D + + G C + G LD A L + +
Sbjct: 117 VITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTKASQF 176
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G + AYN +L+ + R +D L E + D Y+ + +FNV+I +C+
Sbjct: 177 GRRIEPYAYNNLLNLLIARGRAQDAVAL---FESWIQDGLYS---PDGWSFNVVIKGVCR 230
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI-GKK 381
+ + A++L RM E+GC P+ T +L+ L +A +V G +++ R++ G +
Sbjct: 231 VGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVV 290
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
Y ++ C R+E A+SV+ M G P++ TY++L+ +
Sbjct: 291 TYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGY 334
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 47/284 (16%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPK--TLASCIDRLVRAGRPTQVLGFFER 188
T + D R K HD L + V P T S I +AGR L +
Sbjct: 255 THNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYND 314
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGY--ASYAEKLVKDTANEIF----PDDKICDLLIKG 242
M + G + + + +++ NGY A E V+ I PD LI G
Sbjct: 315 M-LESGTRPNTVTYNVLI-----NGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDG 368
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF--------RLD--- 291
+C G+LD+A R+ +EM + + ++ I+ + K R + R D
Sbjct: 369 YCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAP 428
Query: 292 ------------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
EA ++ DME G + T+ +LI C R +AI LF
Sbjct: 429 QTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLF 488
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
++M E GC P++ T I + +A E D+++ + ++G+A
Sbjct: 489 HKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIM--LIASGHA 530
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW-GCHPNETTFLVLIKSLYQAARVGEG 364
VP + ++++ +I+ LC+ R DA+KLF +M + G P+ F + S A +
Sbjct: 107 VPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAA 166
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG-HNPDSETYDLLMT 423
++ + G I Y L L R + A+++FE DG ++PD ++++++
Sbjct: 167 VTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIK 226
Query: 424 KWCAHNRVDKANALFDEAVRNG 445
C KA L + G
Sbjct: 227 GVCRVGNFQKALELVERMTEFG 248
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 174/448 (38%), Gaps = 42/448 (9%)
Query: 36 HYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSH--- 92
H + L +P + PTS P + P + I +L D + ++ R H+I SH
Sbjct: 7 HRFSTLIEPPNKTPTSKPFFLPIPHRTIPEPRGQDL------DFICVAHR-HVINSHWEK 59
Query: 93 -----VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
+ TP ++ L + L + W+ ++ SHT +T S + + F
Sbjct: 60 LLPLSTSLTPFRLKHLLLALQNDHVSSLKLSTWVLKHNPSSHTLDTHSILLHTLSKHRQF 119
Query: 148 KAIHDFLVDNKEVLGPKTLASCI---DRLVRAGRPTQVLGFFERME-------------- 190
K FL P TL + RL + P F+ +
Sbjct: 120 KTTQKFLTQTLSSHPPHTLFDALLFSYRLCNSSSPLVFDSLFKTLAHTNKFRHATHIYTL 179
Query: 191 -RDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDG 247
+++GF S + L A A ++ + P+ +++I+ +C+ G
Sbjct: 180 MKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLG 239
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
++ + + +M G V++N + +S C K L A KV M NGV
Sbjct: 240 EVQKGFDMLEKMMDMGLSPNVVSFNTL---ISGYCNKG----LFGLALKVKSLMVENGVQ 292
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
NV TFN LI+ CK R+ +A ++F M P+ T+ L+ Q G +
Sbjct: 293 PNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRV 352
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M G Y + LC + ++A ++ + P++ T+ L+T C
Sbjct: 353 YEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCV 412
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRV 455
N ++A ++ VR+G + +++
Sbjct: 413 RNNSERAFLIYRSMVRSGCSPNGQTFQM 440
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 103/269 (38%), Gaps = 49/269 (18%)
Query: 186 FERMER--DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TANEIFPDDKICDLLIK 241
F+ +E+ D G + S ++ C G A K VK N + P+ + LI
Sbjct: 245 FDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALK-VKSLMVENGVQPNVVTFNTLIN 303
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE-AEKVLLD 300
G+C + KL EA R+ EM + V YN +L+ ++ DSE +V +
Sbjct: 304 GFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVG--------DSEMGVRVYEE 355
Query: 301 MEYNGVPRNVETFNVLISNLCK----------------------------------IRRS 326
M NG+ ++ T+N LI LCK +R +
Sbjct: 356 MMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNN 415
Query: 327 EDAIKLFYR-MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+ L YR M GC PN TF +LI + + +++ M + E
Sbjct: 416 SERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSE 475
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
LC + + A+++ +M+ PD
Sbjct: 476 LCDGLCRCGKNQLALALCSEMEVRRLLPD 504
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 12/235 (5%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+++VK+ + P+ LI G C +G++DEA + EM G E Y +
Sbjct: 299 DRMVKEGCD---PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP---I 352
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
+ LC + + EA +++ M+ G NV+T+ LIS L ++ + E AI L+++M +
Sbjct: 353 TALCAIEH----EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 408
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G PN T+ LI L R ++ M+ G + Y E + LC IE+
Sbjct: 409 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 468
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
AM +FEKM G P TY+ L+ + V+ A L D NG E P E+
Sbjct: 469 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE--PDEW 521
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 124/295 (42%), Gaps = 17/295 (5%)
Query: 158 KEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
KE L P T+ + I+ L GR + L F ME +G + + +++ LC G
Sbjct: 408 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGSLANTQTYNEIIKGLCLGGDI 466
Query: 216 SYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
A EK++K P + LI G+ G ++ A RL M G E Y
Sbjct: 467 EKAMVLFEKMLKMGP---LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 523
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N ++ SK + L+S A +M G+ N ++ LI K + + A+
Sbjct: 524 NELVSGFSKWGK------LES-ASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALS 576
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
L RM E GC+PN ++ +I L + R E +++ D+M G Y + LC
Sbjct: 577 LLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLC 636
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
R + A +F M+ P+ TY L+ C + D+A L E R G+
Sbjct: 637 RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G DGK+D A L M G +YN +++ +SK ++ F SEAEK+
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK----ENRF---SEAEKIC 613
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G+ NV T+ LI LC+ R++ A K+F+ M + C PN T+ LI L Q
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E + ++ M+ G A + + + + RI+ A + +M G P+ TY
Sbjct: 674 GKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTY 733
Query: 419 DLLM 422
+L+
Sbjct: 734 SVLL 737
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 126/317 (39%), Gaps = 33/317 (10%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P + + ID + G+ L ERME + G + +S V+ L + S AEK+
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERME-EMGCNPNVESYNAVINGLSKENRFSEAEKIC 613
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
A + + P+ LI G C +G+ A ++ +M + Y+ + + L
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL---IYGL 670
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C++ EAE +L +ME G+ + TF LI + R + A L RM + GC
Sbjct: 671 CQEGKA----DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGC 726
Query: 342 HPNETTFLVLIKSLYQAARVGEG------------------------DEMIDRMKSAGYA 377
PN T+ VL+K L + + E ++ RM G
Sbjct: 727 KPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCE 786
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y ++ LC R +A + + MK G PD E Y L+ C + VD A +
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846
Query: 438 FDEAVRNGVEVKPKEYR 454
F G ++ YR
Sbjct: 847 FHSIEAKGFQLHLSIYR 863
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 131/319 (41%), Gaps = 12/319 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ L GR + L E M + G + + L + LC + A +LV
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEM-IEKGIEPTVYTYTLPITALCAIEHEEEAIELVAR 370
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ + LI G GKL+ A L +M + G TV YN + +++LC
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL---INELCV 427
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
S A K+ ME +G N +T+N +I LC E A+ LF +M + G P
Sbjct: 428 GGR----FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP 483
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ LI V ++D MK G + Y E ++ ++E A F
Sbjct: 484 TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYF 543
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
++M G NP+ +Y L+ +VD A +L + G + Y L K
Sbjct: 544 QEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKE 603
Query: 464 IAVKKGKKRETLPEKMARK 482
+ + E + +KMA +
Sbjct: 604 ---NRFSEAEKICDKMAEQ 619
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI---------FPDD 233
+ R+ RD F D +R+++ K C N + V D NEI + +
Sbjct: 154 ISMLNRLVRDRVFA-PADHIRILMIKACRN---EEEIRRVADFLNEISGMGFGFSLYSCN 209
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ L K V+G A+ L ++M G + + +N +++ +SK K R E
Sbjct: 210 TLLIQLAKFEMVEG----ARNLYKQMLNSGIQPSLLTFNTLINILSK----KGKVR---E 258
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
AE +L + + +V T+ LI C+ R + A +F RM + GC PN T+ LI
Sbjct: 259 AELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLIN 318
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L RV E +M++ M G Y +T LC IE E+A+ + +MK G P
Sbjct: 319 GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRP 378
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ +TY L++ +++ A L+ + ++ G+
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 411
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 19/276 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L R GR F ME+ + + ++ LC+ G A AE L+K+
Sbjct: 627 TYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP-NLYTYSSLIYGLCQEGKADEAEILLKE 685
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + PD+ LI G+ V G++D A L R M G + Y+ +L + K C
Sbjct: 686 MERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECL 745
Query: 284 KKD--------------PFRLDSEAEKV---LLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+ P D E V L M G ++T++ L+S LC+ R
Sbjct: 746 LLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRF 805
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+A +L M E G P+ + L+ + + V ++ +++ G+ + Y
Sbjct: 806 YEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 865
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ LC ++E+A ++F+ M N D + +L+
Sbjct: 866 ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 901
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K CR ++ R L ++ G ++ + N L+ L K E A L+ +M
Sbjct: 178 KACRNEEEIR---RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ TF LI L + +V E + ++ ++ + Y + C ++ A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
VF++M +G +P+S TY L+ C RVD+A + +E + G+E
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 342
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 22/267 (8%)
Query: 161 LGPKTLASCIDRLVRAGRPTQ-VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
L P+ A + +V + T+ V+ FF + + +K + N + S
Sbjct: 111 LSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNM------------NCFISMLN 158
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+LV+D P D I L+IK + ++ E+ GF + N +L ++
Sbjct: 159 RLVRDRV--FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLA 216
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K F + A + M +G+ ++ TFN LI+ L K + +A + ++ ++
Sbjct: 217 K-------FEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQY 269
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
P+ T+ LI + + + DRM G Y + LC R+++A
Sbjct: 270 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 329
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ + E+M G P TY L +T C
Sbjct: 330 LDMLEEMIEKGIEPTVYTYTLPITALC 356
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 7/145 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ G C G+ EA++L ++M GF Y +L K +D A K+
Sbjct: 795 LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK------NLEVD-HALKIF 847
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+E G ++ + LI LCK + E+A LF M E + +E + VL+ L +
Sbjct: 848 HSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKE 907
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDY 383
+ +++ M+S + + Y
Sbjct: 908 GELDLCMKLLHIMESKNFTPNIQTY 932
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 9/308 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L +AGR F+ M R+ G D S +V C+ G A + +
Sbjct: 227 TFNTVVNGLCKAGRMEDARKMFDEMARE-GLTPDGVSYNTLVSGYCKAGCLHEALAVFAE 285
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
A + + PD LI C G L+ A L +M G + + ++D CR
Sbjct: 286 MAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALID---GFCR 342
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
LD +A + +M + +V +NVLI+ CK+ R ++A +L + M G P
Sbjct: 343 NG---FLD-DALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKP 398
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ ++ + E+ +M G Y + LC R+ A +F
Sbjct: 399 DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELF 458
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
EKM G PD TY L+ C V KA +L DE ++ GV Y V L K
Sbjct: 459 EKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKS 518
Query: 464 IAVKKGKK 471
K+ ++
Sbjct: 519 ARTKEAQR 526
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 151/336 (44%), Gaps = 18/336 (5%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
GR +D + + D + +E L P ++ + + +AG + L F M + G D
Sbjct: 239 GRMEDARKMFDEMA--REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQK-GVVPDV 295
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLARE 258
+ ++ +C G A LV ++ LI G+C +G LD+A +E
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M + V YN +++ KL R EA +++ +ME G+ +V T++ ++S
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRM-------DEARELIHEMEAKGMKPDVVTYSTILS 408
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
CKI ++ A +L +M + G P+ T+ LI+ L + R+G+ E+ ++M G
Sbjct: 409 GYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQP 468
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL- 437
+ Y + C +++A+S+ ++M G PD TY +L+ R +A L
Sbjct: 469 DEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528
Query: 438 ----FDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+++ V + ++ + + K +A+ KG
Sbjct: 529 FKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKG 564
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 8/204 (3%)
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD-MEYN 304
D L A+RL M R G YN + V LC + EA V+ D M
Sbjct: 132 DASLPSARRLLASMLRDGVAPNVYTYNIL---VRALCARGQ----REEALGVVGDDMRGA 184
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G NV T+N L++ C+ + A +L M E G P+ TF ++ L +A R+ +
Sbjct: 185 GCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDA 244
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+M D M G Y ++ C + +A++VF +M G PD T+ L+
Sbjct: 245 RKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHA 304
Query: 425 WCAHNRVDKANALFDEAVRNGVEV 448
C +++A AL + G+ +
Sbjct: 305 MCRAGNLERAVALVGQMRERGLRM 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCVSKLCRKKDP 287
+ P+ ++L++ C G+ +EA + + RG G V YN + V+ CR +
Sbjct: 150 VAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTL---VAAFCRAGE- 205
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+D+ AE+++ M GV ++ TFN +++ LCK R EDA K+F M G P+ +
Sbjct: 206 --VDA-AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVS 262
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+ +A + E + M G + + +C +E+A+++ +M+
Sbjct: 263 YNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR 322
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKA 434
G + T+ L+ +C + +D A
Sbjct: 323 ERGLRMNEFTFTALIDGFCRNGFLDDA 349
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 87/216 (40%), Gaps = 10/216 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S I L R FE+M + G + D+ + +++ C+ G A L +
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQ-LGLQPDEFTYTTLIDGHCKEGNVQKALSLHDE 495
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC------ 277
+ + PD +LI G + EA+RL ++Y + Y ++ C
Sbjct: 496 MIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEF 555
Query: 278 --VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
V L + L ++A+KV M + ++VLI C+ A+ +
Sbjct: 556 KSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQ 615
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+ G PN T+ + L++ L++ E D +I +
Sbjct: 616 LLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 9/277 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NE 228
I G+ + L F +M+ D F D + ++V CE G + A K ++ N
Sbjct: 267 IHGFCEVGKIDEALELFFQMKEDGCFP-DVPTYTVLVAAFCEVGKETEALKFFEEMVENG 325
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ +LI +C GK+DE + M G V +N ++D C++
Sbjct: 326 IEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALID---GYCKRG--- 379
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+ +A VL M+ N V N T+N LI C+ + + A+ L +M E PN T+
Sbjct: 380 -MMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTY 438
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L +A V + M G+ ++ + F+ LC + ++EQA VFE +K
Sbjct: 439 NTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKE 498
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ Y L+ +C + A+ LF + G
Sbjct: 499 KHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG 535
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 25/302 (8%)
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICD 237
P L FF+ + +GF S + ++ L NG+ AE V+++
Sbjct: 82 HPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAEN-VRNS------------ 128
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+IK CV EA+ + + F L +YN + +S+ F L E +
Sbjct: 129 -MIKS-CVSSH--EARFVLNLLTHHEFSLSVTSYNRLFMVLSR-------FGLIDELNCL 177
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
DM +GV N+ +FN +++ CKI A F + ++G + T+ LI +
Sbjct: 178 FKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCK 237
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+G+ ++ + M G + Y + C + +I++A+ +F +MK DG PD T
Sbjct: 238 IHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPT 297
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKR-ETLP 476
Y +L+ +C + +A F+E V NG+E Y V Y K + +G + T+
Sbjct: 298 YTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTML 357
Query: 477 EK 478
EK
Sbjct: 358 EK 359
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C +L +A ++ M + G V+Y + + C ++D EA ++
Sbjct: 231 LILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYT---NLIHGFCEVG---KID-EALELF 283
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ +G +V T+ VL++ C++ + +A+K F M E G PN T+ VLI +
Sbjct: 284 FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKV 343
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ EG EM+ M G + + C +E A+ V + MK + P+S TY
Sbjct: 344 GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY 403
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRN 444
+ L+ +C +D+A AL ++ N
Sbjct: 404 NELICGFCRKKSMDRAMALLNKMYEN 429
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 8/249 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C GK+DEA L +M G Y + V+ C ++EA K
Sbjct: 266 LIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVL---VAAFCEVGK----ETEALKFF 318
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M NG+ NV T+ VLI CK+ + ++ +++ M E G + F LI +
Sbjct: 319 EEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKR 378
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + ++D MK + Y E + C + +++AM++ KM + +P+ TY
Sbjct: 379 GMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTY 438
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKR-ETLPE 477
+ L+ C VD A L +++G + + L K V++ + E+L E
Sbjct: 439 NTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKE 498
Query: 478 KMARKRRRL 486
K A L
Sbjct: 499 KHAEANEFL 507
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 28/262 (10%)
Query: 227 NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
N++ P+ + LI G C +D A RL M + GF + +DC+ K+ + +
Sbjct: 429 NKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQ 488
Query: 287 PFRL-DSEAEK----------VLLD-----------------MEYNGVPRNVETFNVLIS 318
++ +S EK L+D M + G N TFNVL+
Sbjct: 489 AHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLD 548
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
L K + EDA+ L MG++ P T+ +LI+ + + + + +D+M S+G
Sbjct: 549 GLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQP 608
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
Y F+ C R+ +A + K+K +G DS YD+L+ + ++D A +
Sbjct: 609 NVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVL 668
Query: 439 DEAVRNGVEVKPKEYRVDPRYL 460
G E + Y + ++L
Sbjct: 669 IRMFDTGCEPSRQTYSILLKHL 690
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 206 VEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
++ C G AE++V E I D I D+L+ + G+LD A + M+ G
Sbjct: 617 IKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGC 676
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN----GVPRNVETFNVLISNL 320
E Y+ +L K L+ +YN G+ N +V +N+
Sbjct: 677 EPSRQTYSILL--------------------KHLIFEKYNKEGMGLDLNSTNISVDNANI 716
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
KI E LF +M E GC PN T+ LIK L + + + + MK +G + +
Sbjct: 717 WKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSE 776
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ L+ C + E+A+ + + M H E+Y LL+ +KA +F
Sbjct: 777 NIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRS 836
Query: 441 AVRNGVEVKPKEYRV 455
+ G ++V
Sbjct: 837 LLSCGYNYDEVVWKV 851
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 132/333 (39%), Gaps = 53/333 (15%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+H ++ + V +T + ID L + G+ Q FE ++ + + ++ +++
Sbjct: 457 LHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHA-EANEFLYTALIDGY 515
Query: 210 CENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAR----------- 257
C+ S A L K E FP+ ++L+ G +GK+++A L
Sbjct: 516 CKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTV 575
Query: 258 ------------------------EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+M G + V Y + CR+ RL E
Sbjct: 576 HTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAF---IKAYCRQG---RL-LE 628
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
AE++++ ++ G+ + ++VL++ I + + A + RM + GC P+ T+ +L+K
Sbjct: 629 AEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLK 688
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L EG M + S ++ + ++ I E +FEKM G P
Sbjct: 689 HLIFEKYNKEG--MGLDLNSTNISVDNANIWK-------IADFEIITMLFEKMVEQGCVP 739
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ TY L+ C + A LF+ +G+
Sbjct: 740 NVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGI 772
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GFK + +++ + ++ L ++ +++ I P+ ++LI G CV+G L +A
Sbjct: 944 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L ++M GF V YN +L+ K R K L M G+ +V T
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDY-------MICKGIEADVCT 1056
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NV I NLC RS A L +M + PNE T+ LI + ++G ++ + M
Sbjct: 1057 YNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS 1116
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y + C + E+A+ + + M+ G + TY L+ C H + +
Sbjct: 1117 KFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFE 1176
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A L + N + V Y V
Sbjct: 1177 LAKRLLERMRVNDMVVGHIAYTV 1199
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 116/278 (41%), Gaps = 43/278 (15%)
Query: 204 LVVEKLCENGYASYAEKLV----KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
++++ LC+NG A +LV KD N PD LI G+C G + AK + M
Sbjct: 1199 VLIDGLCKNGMLDEAVQLVGNMYKDGVN---PDVITYSSLINGFCRVGNIKSAKEIICRM 1255
Query: 260 YRGGFELGTVAYN-------------------CILDC-------------VSKLCRKKDP 287
YR G L + Y+ +++C VS LCR
Sbjct: 1256 YRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 1315
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
EAEK L M G+ N T++ +I+ I +A F M + G HP+ T
Sbjct: 1316 ----GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFT 1371
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ L+K L + + E + ++R+ A+ Y L C + +A+++F+KM
Sbjct: 1372 YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 1431
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ PDS TY L+T C + A LF A+ G
Sbjct: 1432 QNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG 1469
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 9/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L R + ++M ++ ++ + ++ + G A ++ + + +
Sbjct: 1061 IDNLCTNHRSAKAYLLLKKMRKEM-ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFD 1119
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ + LI G C G +EA RL M G L V Y +L+ LC K + F
Sbjct: 1120 LSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLN---GLC-KHEKF 1175
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
L A+++L M N + + VLI LCK ++A++L M + G +P+ T+
Sbjct: 1176 EL---AKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITY 1232
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + + E+I RM +G + K Y + C + +AM V+ M
Sbjct: 1233 SSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNC 1292
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+GH D T ++L++ C ++ +A R G+
Sbjct: 1293 NGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGL 1330
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 121/319 (37%), Gaps = 31/319 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T S + L + G + F R+ G D ++ + C++G A L K
Sbjct: 1371 TYGSLLKGLCKGGNLVEAKKFLNRLHYIPG-AVDSVMYNTLLAETCKSGNLHEAVALFDK 1429
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRL-AREMYRGGFELGTVAYNCILDCVSKLC 282
N + PD L+ G C GK A L M RG V Y C++D +SK
Sbjct: 1430 MVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAG 1489
Query: 283 RKKDPFRL-----------DSEAEKVLLD-----------------MEYNGVPRNVETFN 314
K F D+ A ++D M + GV N+ T+N
Sbjct: 1490 HPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 1549
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
+L+ K + + L+ M G P++ TF LI L ++ G +++ +M
Sbjct: 1550 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 1609
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G + + + + ++ +A + M T G PD +TY+ + + ++
Sbjct: 1610 GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 1669
Query: 435 NALFDEAVRNGVEVKPKEY 453
+ E + NGV K +Y
Sbjct: 1670 TVVLHEMLENGVIPKHAQY 1688
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 118/307 (38%), Gaps = 13/307 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L ++G P + +M + G D+ + +++ K E+G A LV
Sbjct: 1582 TFHSLILGLSKSGIPDLGVKLLGKMIME-GTLADQFTFNILINKYSESGKMRKAFDLVNF 1640
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+FPD + + G E+ + EM G Y +++ + ++
Sbjct: 1641 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 1700
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ F+L E ME G + + ++ L ++EDA+ + M P
Sbjct: 1701 IQGAFKLKDE-------MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1753
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
TF L+ + A++ E ++ M+ G + Y + +C A ++
Sbjct: 1754 TIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELY 1813
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
E+M+ P+ TY +L+ A N + + L + G+ + ++L K
Sbjct: 1814 EEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL----ISWGGSTQHLDKE 1869
Query: 464 IAVKKGK 470
+ V GK
Sbjct: 1870 LTVAMGK 1876
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 42/183 (22%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +V T N++++++ K +R+E LF M + G PN TF +LI L
Sbjct: 944 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGL--------- 994
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
C +++A ++ ++M+ +G P TY+ L+
Sbjct: 995 --------------------------CVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 1028
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV-------DPRYLKKPIAVKKGKKRETLPE 477
+C R A L D + G+E Y V + R K + +KK +K P
Sbjct: 1029 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 1088
Query: 478 KMA 480
++
Sbjct: 1089 EVT 1091
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 21/251 (8%)
Query: 185 FFERMERDYG-----FKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDL 238
FFE+ R + K D S ++++ CE GY E L + + P+ +
Sbjct: 145 FFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 204
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVA----YNCILDCVSKLCRKKDPFRLDSEA 294
LI G C +G ++ K+L Y+ G EL VA Y +++ K+ KKD L +
Sbjct: 205 LIDGCCKNGDIERGKQL---FYKMG-ELDVVANQYTYTVLINGFFKMGLKKDGIELYEK- 259
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
M+ G+ NV T+N +I C + +A +LF M E G N T+ LI
Sbjct: 260 ------MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGG 313
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L Q RV E + ++ RMK G + Y + C I +++A S+F +MK+ G +P
Sbjct: 314 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPS 373
Query: 415 SETYDLLMTKW 425
TY++L+ +
Sbjct: 374 LATYNILIAGF 384
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 8/288 (2%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I+ VR+ P Q L +F +M G ++ ++ L ++ + A ++ +T
Sbjct: 100 AIINAHVRSQLPEQALFYFNQM-IGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKG 158
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ D ++IKG C G LD+ + +M G V Y ++D C+ D
Sbjct: 159 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID---GCCKNGDI 215
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
R +++ M V N T+ VLI+ K+ +D I+L+ +M G PN T
Sbjct: 216 ER----GKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYT 271
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +I ++ E+ D M+ G A Y + LC R+ +A + +MK
Sbjct: 272 YNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK 331
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
DG +P+ +Y+ L+ +C+ +DKA++LF++ +G Y +
Sbjct: 332 RDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 379
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ + +I C DGKL+ A L EM G V YN + + LC+++
Sbjct: 265 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTL---IGGLCQERRVL 321
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EAE+++ M+ +G+ N+ ++N LI C I + A LF +M G P+ T+
Sbjct: 322 ----EAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATY 377
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI +A +M+ M++ G + K Y + L + IE+A ++ M+
Sbjct: 378 NILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEK 437
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
G D Y +L+ C + +A+ LF
Sbjct: 438 AGLVADIYIYGVLIHGLCVVGDMKEASKLF 467
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ LI G C + ++ EA+RL M R G ++YN ++D + LD +A
Sbjct: 308 NTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGN------LD-KASS 360
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+ M+ +G ++ T+N+LI+ + + S + M G P++ T+ +L+ +L
Sbjct: 361 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 420
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
++ + + ++ M+ AG Y + LC + +++A +F+ + P+
Sbjct: 421 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 480
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
Y+ ++ +C +A L E NG+ Y + L K
Sbjct: 481 IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCK 526
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 121/324 (37%), Gaps = 32/324 (9%)
Query: 127 FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFF 186
+++T FF G +KD +++ + V T S I R G+ F
Sbjct: 235 YTYTVLINGFFK--MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 292
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCV 245
+ M R+ G + + ++ LC+ AE+L+ + + + P+ + LI G+C
Sbjct: 293 DEM-RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCS 351
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK--------- 296
G LD+A L +M G YN ++ S+ + E E
Sbjct: 352 IGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVT 411
Query: 297 --VLLD-----------------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+L+D ME G+ ++ + VLI LC + ++A KLF +
Sbjct: 412 YTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLD 471
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E PN+ + +I + ++ M G Y + LC E+
Sbjct: 472 EMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWT 531
Query: 398 QAMSVFEKMKTDGHNPDSETYDLL 421
+A + + M G P ++++
Sbjct: 532 EAEVLLKDMIELGLKPSISIWNMI 555
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ D I +LI G CV G + EA +L + + + V YN + + C++ +
Sbjct: 440 LVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM---IYGYCKEGSSY 496
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A ++L +M NG+ NV ++N I LCK + +A L M E G P+ + +
Sbjct: 497 R----ALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIW 552
Query: 349 LVLIKS 354
++ K+
Sbjct: 553 NMISKA 558
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 113/280 (40%), Gaps = 35/280 (12%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
+ + +V+ L + G A L +D A PD + + LI G C +L E+ L
Sbjct: 323 NSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLL 382
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKD---------PFRL----------------- 290
+EM G E + NCI C LCR+ D R+
Sbjct: 383 QEMEESGIEPTSFTNNCIFGC---LCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKEL 439
Query: 291 -----DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ EA K L+DM G ++ ++ + L KI+ + A+KLF + G P+
Sbjct: 440 CKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDV 499
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
+ +LIK L + R+ E ++ M+ G Y + LC + +E+AM
Sbjct: 500 IAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSM 559
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
M P+ TY L+ C R D A L++E R G
Sbjct: 560 MIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKG 599
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 16/246 (6%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDG-----KLDEAKRLAREM 259
+V++LC++G A K + D A E F D ++ C+DG ++D+A +L +++
Sbjct: 435 LVKELCKHGKEVEACKFLVDMAEEGFQPD----IVAYSACLDGLIKIQEVDQALKLFQDI 490
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G+ +AYN + + LC+ + R+ +EA+ +L +ME G+ + T+N LI
Sbjct: 491 CAQGYCPDVIAYNIL---IKGLCKTQ---RI-AEAQNLLHEMEEKGLVPSAVTYNTLIDG 543
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LCK E+A+ M E PN T+ LI L A R + + + M G
Sbjct: 544 LCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPS 603
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
Y F+ L R +A+ +M+ PD+ Y L+ + + A +
Sbjct: 604 SIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQ 663
Query: 440 EAVRNG 445
E V G
Sbjct: 664 EMVDKG 669
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 24/279 (8%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA----------NEIF---- 230
FFE M D K V+ L +NG A L++ ++F
Sbjct: 259 FFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKA 318
Query: 231 ---PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P+ ++I G G LD A L R+M R G + + YN ++D LC
Sbjct: 319 MVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLID---GLCTSN-- 373
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
RL E+ +L +ME +G+ T N + LC+ A+ L +M G P
Sbjct: 374 -RL-QESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKH 431
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
L+K L + + E + + M G+ Y L L I+ ++QA+ +F+ +
Sbjct: 432 STSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDIC 491
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G+ PD Y++L+ C R+ +A L E G+
Sbjct: 492 AQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGL 530
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 123/309 (39%), Gaps = 35/309 (11%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
L KT S I V+ R + L F++M++ GF D +++ LC N A
Sbjct: 168 LNKKTFCSLIYGFVKESRVDKALHLFDKMKKS-GFTPDISLYDVIIGGLCVNKDVKKALC 226
Query: 221 LVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG-GFELGTVAYNCILDCV 278
L + +I PD KI LI + K +E EM+ + T+ YN +L+ +
Sbjct: 227 LYSEMKGFKIQPDVKIVTKLISSF---SKEEELTCFFEEMHEDMDPKASTLLYNSVLNSL 283
Query: 279 SKLCRKKDPFRL-----------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ L D E K+ VP N TF+++I+ L K +
Sbjct: 284 VDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAM--VPPNSTTFSIVINGLIKTGDLD 341
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A+ LF M GC P+ + LI L + R+ E ++ M+ +G
Sbjct: 342 LAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIF 401
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
LC I A+ + +KM+ GH P W H + +L E ++G E
Sbjct: 402 GCLCRRHDISGALHLLKKMRIHGHVP-----------WIKH-----STSLVKELCKHGKE 445
Query: 448 VKPKEYRVD 456
V+ ++ VD
Sbjct: 446 VEACKFLVD 454
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 247 GKLDEAKRLAREMYRGGFEL-GTVAYNCILDCVSK-LCRKKDPFRLDSEAEKVLLDMEYN 304
G + EA L ++ + G + + +Y C+L+ +SK +C RL +M +
Sbjct: 44 GLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLK--------EMHDH 95
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G + T ++ C + + A+ +F + + G +E F +L+ + + +V +
Sbjct: 96 GWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRG-WVDEYVFSILVLAFSKWGKVDKA 154
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E+I+ M+ + KK + + R+++A+ +F+KMK G PD YD+++
Sbjct: 155 CELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGG 214
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKP 450
C + V KA L+ E G +++P
Sbjct: 215 LCVNKDVKKALCLYSE--MKGFKIQP 238
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
F++L+ K + + A +L M E N+ TF LI + +RV + + D+M
Sbjct: 137 VFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKM 196
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
K +G+ Y + LC + +++A+ ++ +MK PD + L++ +
Sbjct: 197 KKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSF 250
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 14/262 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLIKGWCVDGKLDEA 252
GFK + V+ L E G + + +K+ FP D C++++ C++G L A
Sbjct: 185 GFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGA 244
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
K + +M + YN IL K R K A VL DME NGV +V T
Sbjct: 245 KHMIHKMKSCSLP-NVITYNTILHWYVKKGRFK-------AAMCVLEDMEKNGVEADVYT 296
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N++I LCK++RS A L RM P+E T+ LIK + +++ + + M
Sbjct: 297 YNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEML 356
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y + C I++A+ V +M+ G P TY ++ + V
Sbjct: 357 RQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAML-----NGSVH 411
Query: 433 KANALFDEAVRNGVEVKPKEYR 454
+A +++D + G YR
Sbjct: 412 EAFSVYDNMEKYGCSPDVYTYR 433
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 130/274 (47%), Gaps = 14/274 (5%)
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPD 232
V+ GR + E ME++ G + D + ++++KLC+ +++A L+K + + PD
Sbjct: 270 VKKGRFKAAMCVLEDMEKN-GVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPD 328
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
+ + LIKG+ + K+ A + EM R G + Y ++D CR
Sbjct: 329 ECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLID---GYCRNGTI----D 381
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
EA +VL +M+ GV + T++ +++ +A ++ M ++GC P+ T+ L+
Sbjct: 382 EALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEAFSVYDNMEKYGCSPDVYTYRNLL 436
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ L + + + E + + AI +K L +C +++A+ + EKM T
Sbjct: 437 RGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFI 496
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
PD TY +L++ +C ++ A L + G+
Sbjct: 497 PDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGL 530
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
TA I P + +++G GK++E + + R G + ++ + K +
Sbjct: 772 TALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKI 831
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
D L S ME G+ +V T+NVLI+ LCKI+ DA++L+ M G PN
Sbjct: 832 SDALHLKSL-------MESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPN 884
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
TT+ L +++Y R EG+++++ ++ G
Sbjct: 885 VTTYTTLTEAIYGTGRTLEGEKLLNDIEDRG 915
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 7/191 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P K +I G L + + R+M G E Y +++ + FRL
Sbjct: 708 PSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRL 767
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
E + + VP V ++ + L K + E+ I +F + G P TF
Sbjct: 768 KEEMTALGI------VPAEVADSSI-VRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTT 820
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ L + A++ + + M+S G I Y +T LC I+ + A+ ++E+MK+ G
Sbjct: 821 LMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKG 880
Query: 411 HNPDSETYDLL 421
P+ TY L
Sbjct: 881 LRPNVTTYTTL 891
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 111/286 (38%), Gaps = 30/286 (10%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLA 256
D+ +L ++ +C +G A L + F PD +L+ G+C GK+ A L
Sbjct: 463 DQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILL 522
Query: 257 REMYRGGFELGTVAYNCILDCVSK--------------LCRK---KDPFRLDS------- 292
+ M G V Y C+L + K +C++ D +S
Sbjct: 523 QMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLK 582
Query: 293 -----EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ E + DM N V N ++N+L+ K +I L+ M G P T
Sbjct: 583 AGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVT 642
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +LI L + + + +D+M G + + + R+ A+ +F MK
Sbjct: 643 YRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMK 702
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+P S+TY ++ N + + + + V +G+E K Y
Sbjct: 703 WLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHY 748
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 115/281 (40%), Gaps = 9/281 (3%)
Query: 174 VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPD 232
++ G ++ + ++ M R G K + RL++ L ++G A K + E I+PD
Sbjct: 616 IKKGHLSRSIYLYKDMVRK-GIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPD 674
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
D+LI + ++ +A +L M + Y+ + ++ L RK
Sbjct: 675 RLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAM---INGLIRKN----WLQ 727
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+ VL DM +G+ + LI+ C+ A +L M G P E ++
Sbjct: 728 HSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIV 787
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ L + +V EG + + AG + + LC +I A+ + M++ G
Sbjct: 788 RGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLK 847
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
D TY++L+T C V A L++E G+ Y
Sbjct: 848 IDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTY 888
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 118/302 (39%), Gaps = 59/302 (19%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP---DD 233
G + ++ ME+ YG D + R ++ LC+ G+ A++ + + P D
Sbjct: 408 GSVHEAFSVYDNMEK-YGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVH--IPSAIDQ 464
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
K + L+ G C G LDEA L +M
Sbjct: 465 KTLNALLLGICNHGSLDEALDLCEKM---------------------------------- 490
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+ N +P ++ T+ +L+S C+ + A+ L M E G P+ T+ L+K
Sbjct: 491 -------VTINFIP-DIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLK 542
Query: 354 SLYQAARVGEGDEMIDRM--KSAGYA--IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
L + +V + + K YA I + + ++E M++++ M +
Sbjct: 543 GLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVE--MTIYD-MNQN 599
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK----PIA 465
P+ +Y++LM + ++ L+ + VR G++ YR+ L K IA
Sbjct: 600 KVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIA 659
Query: 466 VK 467
VK
Sbjct: 660 VK 661
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
DLL+ + + ++ +A M GF+ A N +L+ + ++ K + E
Sbjct: 159 DLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEG-- 216
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
P +V T N++++++C + A + ++M PN T+ ++
Sbjct: 217 -----LVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYV 270
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ R +++ M+ G Y + +LC ++R A + ++M+ D PD
Sbjct: 271 KKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDEC 330
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY+ L+ + +++ A +F+E +R G++
Sbjct: 331 TYNTLIKGFFDESKMMLAIHIFNEMLRQGLK 361
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 10/199 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI C G ++ A RL EM G VA + I+ +SK C K + E V
Sbjct: 751 LINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSK-CGKVE------EGIIVF 803
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ G+ + TF L+ LCK + DA+ L M G + T+ VLI L +
Sbjct: 804 CSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKI 863
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
V + E+ + MKS G Y + G R + + ++ G P +Y
Sbjct: 864 QCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVP---SY 920
Query: 419 DLLMTKWCAHNRVDKANAL 437
+W N +D+ N +
Sbjct: 921 TDQCPEWRMENAMDRLNMI 939
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 108/256 (42%), Gaps = 7/256 (2%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKI-CDLLIKGWCVDGKLDEA 252
GF D + L++ LCENG + A + + F + I LI G C G + +A
Sbjct: 848 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 907
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ EM R G++ + ++D + K + FRL L + + NV T
Sbjct: 908 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL------FLKLVRSDTYKPNVHT 961
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+ +I CK + A LF RM E G PN T+ LI +A G E+++ M
Sbjct: 962 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 1021
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G+ Y + LC R +A + K + G D TY +L+ + C N ++
Sbjct: 1022 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 1081
Query: 433 KANALFDEAVRNGVEV 448
+A A F + G E
Sbjct: 1082 QALAFFCRMNKTGFEA 1097
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 9/296 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + G + F ++ R +K + + ++ C+ + AE L
Sbjct: 925 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 984
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ +FP+ LI G C G A L M GF YN +D + K R
Sbjct: 985 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 1044
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + L ++A +E +GV T+ +LI CK A+ F RM + G
Sbjct: 1045 APEAYELLNKAFSC--GLEADGV-----TYTILIQEQCKQNDINQALAFFCRMNKTGFEA 1097
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ +LI + + ++ E + + + S G K+ Y ++ C I+ A+ F
Sbjct: 1098 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 1157
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRY 459
MK G PDS TY L++ C + VD+A L++ + G+ P+ RV Y
Sbjct: 1158 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS-PPEVTRVTLAY 1212
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Query: 247 GKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGV 306
G+L+EA + +M G ++ NC+L+ +L L AE V +M GV
Sbjct: 762 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVEL-------GLIEYAENVFDEMSVRGV 814
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
+ ++ +++ + + ++A + M + G P+ T +++ +L + V
Sbjct: 815 VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIW 874
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+M G+ ++ + LC I+QA + E+M +G P+ T+ L+ C
Sbjct: 875 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 934
Query: 427 AHNRVDKANALFDEAVRN 444
+KA LF + VR+
Sbjct: 935 KRGWTEKAFRLFLKLVRS 952
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 24/209 (11%)
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
+G L +A + R M R E+G RL+ EA +++DM+
Sbjct: 740 ANGNLQKAHEVMRCMLRNFSEIG---------------------RLN-EAVGMVMDMQNQ 777
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ + T N ++ ++ E A +F M G P+ +++ +++ ++ ++ E
Sbjct: 778 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 837
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
D + M G+ LT LC + +A+ F KM G P+ + L+
Sbjct: 838 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 897
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEY 453
C + +A + +E VRNG KP Y
Sbjct: 898 LCKKGSIKQAFEMLEEMVRNG--WKPNVY 924
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 9/273 (3%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
R+G + L F+ M D G + ++ +C+ G A+ LV + + I +
Sbjct: 346 RSGNVKRALVLFDEM-TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 404
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
I + LI G+C G +DEA RL M + G E AYN I + KL RK E
Sbjct: 405 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK-------DE 457
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A+ +L M GV N +F LI CK +A ++F M E G PN T+ VLI
Sbjct: 458 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 517
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ + E ++ D +++ G + C +++ A+ +F++M G P
Sbjct: 518 GYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP 577
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ TY +++ R ++A L+DE G+
Sbjct: 578 NVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 610
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 30/227 (13%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
L P + ID +G + L ME+ G + D + + LC+ A+
Sbjct: 402 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKK-GLESDVFAYNSIASGLCKLNRKDEAKG 460
Query: 221 LVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L+ + P+ LI +C +G EAKR+ REM G + YN ++D S
Sbjct: 461 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 520
Query: 280 KLCRKKDPFRLDSEAE----------------------------KVLLDMEYNGVPRNVE 311
K K+ +L E E K+ +M G+ NV
Sbjct: 521 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 580
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
T+ +IS L K RSE+A KL+ M E G P++T + L+ SL+ A
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLL 239
+ L FE ME+ GF D+ S + + L G + + N ++ ++
Sbjct: 177 EALEAFEHMEKK-GFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIV 235
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD-SEAEKVL 298
+ G C G ++ ++L E+ G + V YN ++ K RLD ++L
Sbjct: 236 LDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFK--------RLDLGGVAEIL 287
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME GV NV T+ +LI I + E+A +LF M E G + + +I ++
Sbjct: 288 TLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRS 347
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
V + D M G Y + +C ++E A + +M+ G + + +
Sbjct: 348 GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF 407
Query: 419 DLLMTKWCAHNRVDKA 434
+ L+ +C VD+A
Sbjct: 408 NTLIDGYCESGMVDEA 423
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 7/219 (3%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D++ C + + G++D R R M E+ + +LD LC++ D
Sbjct: 193 DERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD---GLCKRGDV---- 245
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
K++ ++ GV NV T+N I K ++ M + G N T+ +L
Sbjct: 246 EMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLL 305
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I ++ E + + M+ G Y ++ C +++A+ +F++M G
Sbjct: 306 IHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGL 365
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
P + TY L+ C +++ A L +E G+++ P
Sbjct: 366 IPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 404
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 141/322 (43%), Gaps = 18/322 (5%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVD-NKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERM 189
T + R+K F ++ + K L P T+ + I+ +G Q + FE+M
Sbjct: 356 TYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKM 415
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDG 247
++ G K + +++ + G + +L++ + + P+D+ C++L++ WC
Sbjct: 416 -KESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL---CRKKDPFRLDSEAEKVLLDMEYN 304
K++EA + +M G + V +N + S++ C +D ++ M +N
Sbjct: 475 KIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAED---------MIIPRMLHN 525
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
V NV T +++ C+ + E+A++ FYRM E G HPN F LIK +
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E++D M+ G + + + +++ ++ M G +PD + +L
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKG 645
Query: 425 WCAHNRVDKANALFDEAVRNGV 446
+ +KA + ++ + GV
Sbjct: 646 YARAGEPEKAEQILNQMRKFGV 667
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-N 212
++ NK +T + ++ G+ + L FF RM ++ G + +++ N
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM-KELGVHPNLFVFNSLIKGFLNIN 580
Query: 213 GYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVA 270
E V D E + PD L+ W G + + + R+M GG + A
Sbjct: 581 DMDGVGE--VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHA 638
Query: 271 YNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAI 330
++ + R +P +AE++L M GV NV + +IS C + A+
Sbjct: 639 FSIL---AKGYARAGEP----EKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 691
Query: 331 KLFYRM-GEWGCHPNETTFLVLIKSLYQA 358
+++ +M G G PN TT+ LI +A
Sbjct: 692 QVYNKMRGSVGLSPNLTTYETLIWGFGEA 720
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 156/363 (42%), Gaps = 21/363 (5%)
Query: 91 SHVTPTPSLVQST----LNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKD 146
S + +PS+ ++T L F +A FN W ++N F+H + D GR +
Sbjct: 17 SLFSLSPSISKTTFFQVLRFIASPPKAFEFFN-WASRNG-FAHDSRSYFMMLDILGRNGN 74
Query: 147 FKAIHDFL--VDNKEVLGPKTLASCIDRLVR----AGRPTQVLGFFERMERDYGFKRDKD 200
+FL ++ + K + L+R AG + + F M + G
Sbjct: 75 LNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLM-KSSGVSPSVI 133
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ ++ L + G + A + + + PD ++LI+G+C + +DE R +E
Sbjct: 134 TFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKE 193
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M R E V YN ++D LCR R+ K ++ + P +V T+ L+
Sbjct: 194 MSRFNCEPDVVTYNTLVD---GLCRA-GKVRIAHNVVKGMVKKMKDLSP-DVVTYTTLVR 248
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID-RMKSAGYA 377
C + ++A+ +F M G PN+ T+ LIK L + + + E++ + G+
Sbjct: 249 GYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFV 308
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
Y + C ++A+ +F+KMK PDS TY +L+ C ++A L
Sbjct: 309 PDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQL 368
Query: 438 FDE 440
FD+
Sbjct: 369 FDK 371
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 15/271 (5%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV----KDTANEIFPDDK 234
P + FF R+ GF D S ++++ L NG + A + + + + +D+
Sbjct: 40 PPKAFEFFNWASRN-GFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDR 98
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
C+ L++ + G +EA +L M G + +N +L + K R + A
Sbjct: 99 FCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRT-------NMA 151
Query: 295 EKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
V +M GV + TFN+LI CK ++ + F M + C P+ T+ L+
Sbjct: 152 HSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVD 211
Query: 354 SLYQAARVGEGDEMIDRM--KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
L +A +V ++ M K + Y + C + I++A+ VFE+M + G
Sbjct: 212 GLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGL 271
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
P+ TY+ L+ C + DK + AV
Sbjct: 272 KPNDITYNTLIKGLCEVQKFDKIKEILGGAV 302
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 110/269 (40%), Gaps = 38/269 (14%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN---EIFPDDKICDLLIK 241
FF+ M R + + D + +V+ LC G A +VK ++ PD L++
Sbjct: 190 FFKEMSR-FNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVR 248
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G+C+ ++DEA + EM G + + YN + + LC + + D E + +
Sbjct: 249 GYCMKQEIDEALVVFEEMVSRGLKPNDITYNTL---IKGLCEVQ---KFDKIKEILGGAV 302
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
G + T+N L++ C ++A+K+F +M E P+ T+ VLI++L Q
Sbjct: 303 GGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDF 362
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+++ D++ ++ DG P Y+ +
Sbjct: 363 ERAEQLFDKLSDEDIL----------------------------LRDDGCTPLVAAYNPI 394
Query: 422 MTKWCAHNRVDKANALFDEAVRNGVEVKP 450
C + + KA +F + ++ G + P
Sbjct: 395 FDFLCKNGKTHKAERVFRQLMKKGTQDPP 423
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY-YEF 386
+AIKLF M G P+ TF L+ L + R + D M Y + Y +
Sbjct: 115 EAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEM-CGTYGVTPDTYTFNI 173
Query: 387 LTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
L R C +++ F++M PD TY+ L+ C +V A+ + V+
Sbjct: 174 LIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKM 233
Query: 446 VEVKP 450
++ P
Sbjct: 234 KDLSP 238
>gi|356510096|ref|XP_003523776.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g18475-like [Glycine max]
Length = 640
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 8/279 (2%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ +D L R GR + FE M D + +++ + C G A +++
Sbjct: 365 TYSTFMDGLCRNGRVKEAFELFEEMVSRDHIVPDPLTYNVLINEFCRRGKPDRARNVIEF 424
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+N +P+ L+ G C GKL++AK + EM G + TV Y + ++ LCR
Sbjct: 425 MKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVLAEMKGSGLKPDTVTYTSL---INFLCR 481
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
EA +L +++ N + TFNV++ LC+ R E+A+ + ++ + G +
Sbjct: 482 NGQI----GEAMGLLKEIKENTCQADTVTFNVILGGLCREDRFEEALDMLEKLPQQGVYL 537
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N+ ++ +++ SL Q + + E++ M S G+ E L LC ++ A
Sbjct: 538 NKGSYRIVLNSLTQKCELKKAKELLGLMLSRGFRPHYATSNELLVCLCKAGMVDDAAVAL 597
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ G P E++++L+ C ++ L +E V
Sbjct: 598 FYLVEMGFQPGLESWEVLIGLICRERKLLYVFELLNELV 636
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 8/217 (3%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMY-RGGFELGTVAYNCILDCVSKLCRKKDPF 288
+P+ + G C +G++ EA L EM R + YN + +++ CR+ P
Sbjct: 360 YPNLFTYSTFMDGLCRNGRVKEAFELFEEMVSRDHIVPDPLTYNVL---INEFCRRGKPD 416
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A V+ M+ N NV ++ L+ LCK+ + EDA + M G P+ T+
Sbjct: 417 R----ARNVIEFMKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVLAEMKGSGLKPDTVTY 472
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L + ++GE ++ +K + L LC +R E+A+ + EK+
Sbjct: 473 TSLINFLCRNGQIGEAMGLLKEIKENTCQADTVTFNVILGGLCREDRFEEALDMLEKLPQ 532
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
G + +Y +++ + KA L + G
Sbjct: 533 QGVYLNKGSYRIVLNSLTQKCELKKAKELLGLMLSRG 569
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 78/160 (48%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+NVLI+ C+ + + A + M C+PN + L+ L + ++ + ++ M
Sbjct: 401 TYNVLINEFCRRGKPDRARNVIEFMKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVLAEM 460
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
K +G Y + LC +I +AM + +++K + D+ T+++++ C +R
Sbjct: 461 KGSGLKPDTVTYTSLINFLCRNGQIGEAMGLLKEIKENTCQADTVTFNVILGGLCREDRF 520
Query: 432 DKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
++A + ++ + GV + YR+ L + +KK K+
Sbjct: 521 EEALDMLEKLPQQGVYLNKGSYRIVLNSLTQKCELKKAKE 560
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRM-GEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N+ T++ + LC+ R ++A +LF M P+ T+ VLI + + +
Sbjct: 362 NLFTYSTFMDGLCRNGRVKEAFELFEEMVSRDHIVPDPLTYNVLINEFCRRGKPDRARNV 421
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
I+ MKS +Y + LC + ++E A V +MK G PD+ TY L+ C
Sbjct: 422 IEFMKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVLAEMKGSGLKPDTVTYTSLINFLCR 481
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ ++ +A L E N + + V
Sbjct: 482 NGQIGEAMGLLKEIKENTCQADTVTFNV 509
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ++ + +AG+ F+ M R+ G D S +V C+ G + A + +
Sbjct: 262 TFNSMVNGMCKAGKMEDARKVFDEMVRE-GLAPDGVSYNTLVGGYCKAGCSHEALSVFAE 320
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
T I PD LI C G L+ A L R+M G ++ V + ++D C+
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALID---GFCK 377
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K LD +A + M+ + +V +N LI+ C + R ++A +L + M G P
Sbjct: 378 KG---FLD-DALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKP 433
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ +I + + E+ +M G Y + LCG +R+ A +F
Sbjct: 434 DVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLF 493
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ M G PD TY L+ C V+ A +L D+ V+ GV
Sbjct: 494 KNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 9/259 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I + +AG + + +M R+ G + ++ + +++ C+ G+ A V+
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQM-RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+C + LI G+C+ G++DEA+ L EM G + V Y+ I+ K C
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
F L+ + M GV + T++ LI LC +R DA LF M + G P
Sbjct: 451 THSAFELNQQ-------MLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+E T+ LI + V + D+M AG Y + L R +A +
Sbjct: 504 DEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563
Query: 404 EKMKTDGHNPDSETYDLLM 422
K+ + P + YD LM
Sbjct: 564 FKLYHEDPIPANTKYDALM 582
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 9/264 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGW 243
FF+ M D G + + ++V LC G+ A +++D P+ + L+ +
Sbjct: 177 FFDSMLSD-GVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAF 235
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
G++D A+RL M GG + V +N +++ + K + +D A KV +M
Sbjct: 236 FRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMED-------ARKVFDEMVR 288
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ + ++N L+ CK S +A+ +F M + G P+ TF LI + +A +
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
++ +M+ G + + + + C ++ A+ MK P Y+ L+
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALIN 408
Query: 424 KWCAHNRVDKANALFDEAVRNGVE 447
+C R+D+A L E G++
Sbjct: 409 GYCMVGRMDEARELLHEMEAKGLK 432
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 13/300 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDK 199
G+ +D + + D +V +E L P ++ + + +AG + L F M + G D
Sbjct: 274 GKMEDARKVFDEMV--REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK-GIMPDV 330
Query: 200 DSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLARE 258
+ ++ +C+ G A LV+ +++ LI G+C G LD+A R
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLIS 318
M + + V YN +++ + R EA ++L +ME G+ +V T++ +IS
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRM-------DEARELLHEMEAKGLKPDVVTYSTIIS 443
Query: 319 NLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI 378
CK + A +L +M E G P+ T+ LI+ L R+ + + M G
Sbjct: 444 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503
Query: 379 GKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ Y + C +E A+S+ +KM G PD TY +L+ R +A L
Sbjct: 504 DEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G+ +AYN +L +S + A + M +GV NV T+N+L+ LC
Sbjct: 151 GYVPSVLAYNAVLLALSDASL--------TSARRFFDSMLSDGVAPNVYTYNILVRALCG 202
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
++A+ + M GC PN T+ L+ + ++A V + ++ M+ G
Sbjct: 203 RGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVT 262
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ + +C ++E A VF++M +G PD +Y+ L+ +C +A ++F E
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 322
Query: 443 RNGV 446
+ G+
Sbjct: 323 QKGI 326
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 10/266 (3%)
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDG 247
M R+ G K + + +V +C+ G A K+ + E + PD + L+ G+C G
Sbjct: 250 MMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAG 309
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
EA + EM + G V + + + +C+ + R A ++ M G+
Sbjct: 310 CSHEALSVFAEMTQKGIMPDVVTFTSL---IHVMCKAGNLER----AVTLVRQMRERGLQ 362
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N TF LI CK +DA+ M + P+ + LI R+ E E+
Sbjct: 363 MNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEAREL 422
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M++ G Y ++ C A + ++M G PD+ TY L+ C
Sbjct: 423 LHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCG 482
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEY 453
R+ A+ LF ++ G++ P E+
Sbjct: 483 EKRLSDAHVLFKNMIKLGLQ--PDEF 506
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 7/203 (3%)
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
D L A+R M G YN + V LC + EA +L DM G
Sbjct: 168 DASLTSARRFFDSMLSDGVAPNVYTYNIL---VRALCGRGH----RKEALSILRDMRGAG 220
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
NV T+N L++ + + A +L M E G PN TF ++ + +A ++ +
Sbjct: 221 CGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDAR 280
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++ D M G A Y + C +A+SVF +M G PD T+ L+
Sbjct: 281 KVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 340
Query: 426 CAHNRVDKANALFDEAVRNGVEV 448
C +++A L + G+++
Sbjct: 341 CKAGNLERAVTLVRQMRERGLQM 363
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EK 220
T +S I L R + F+ M + G + D+ + +++ C+ G A +K
Sbjct: 472 TYSSLIRVLCGEKRLSDAHVLFKNMIK-LGLQPDEFTYTSLIDGHCKEGNVESALSLHDK 530
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+VK + PD +LI G + EA++L ++Y Y+ ++ C K
Sbjct: 531 MVKAG---VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRK 587
Query: 281 ------------LCRKKDPFRLDSEAEKV---LLDMEYNGVPRNVETFNVLISNLCKIRR 325
C K L +EA+KV +LD +N + ++VLI C+
Sbjct: 588 AELKSVLALLKGFCMKG----LMNEADKVYQSMLDRNWN---LDGSVYSVLIHGHCRAGN 640
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
A+ +M + G PN T+ + LI+ L++ V E D++I ++
Sbjct: 641 VMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 686
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 11/226 (4%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+LV+D + PD + +IK +C +G L A R R + GG E T N + V
Sbjct: 58 QLVQDG---LLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL---VL 111
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
CR + +A + L M G RN ++ +LI LC + A+ LF M
Sbjct: 112 GYCRTGEL----RKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRD 167
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
GC PN F LI L ++ RVG+ + D M G Y + + R+ A
Sbjct: 168 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 227
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ + E M+ +G +PD TY+ L+ C + ++A L + AV+ G
Sbjct: 228 LKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 272
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 13/313 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR D + + D + N V T + I + GR L E ME++ G D +
Sbjct: 187 GRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKN-GCHPDDWT 245
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ LC+ AE+L+ + E F P LI G+C+ K D+A R+ +M
Sbjct: 246 YNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 304
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+L + +++ + K KD + EA+++L ++ NG+ NV T+ +I
Sbjct: 305 SSKCKLDLQVFGKLINSLIK----KDRLK---EAKELLNEISANGLVPNVITYTSIIDGY 357
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + + A+++ M GC PN T+ L+ L + ++ + ++ +M+ G
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L C + A +FE M+ +G PD Y +L C R ++A +
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI-- 475
Query: 441 AVRNGVEVKPKEY 453
VR GV + Y
Sbjct: 476 -VRKGVALTKVYY 487
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 10/237 (4%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E L + +AN + P+ +I G+C GK+D A + + M R G + YN ++
Sbjct: 333 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM--- 389
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L + K + A +L M+ +G+ NV T+ L+ C ++A +LF M +
Sbjct: 390 YGLVKDKKLHK----AMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P+E + VL +L +A R E I R G A+ K Y + +
Sbjct: 446 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDF 502
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A ++ E+M +G PDS TY +L+ C R+++A + D+ G++ Y +
Sbjct: 503 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 559
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 10/278 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANE 228
I L A + L F M+RD G + + ++ LC++G A L N
Sbjct: 145 IQGLCDAKCVRKALVLFLMMKRD-GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 203
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P + +I G+ G++++A ++ M + G YN + + LC +K
Sbjct: 204 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL---IYGLCDQKT-- 258
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EAE++L + G V TF LI+ C + +DA+++ +M C + F
Sbjct: 259 ---EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 315
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI SL + R+ E E+++ + + G Y + C +++ A+ V + M+
Sbjct: 316 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 375
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
DG P++ TY+ LM ++ KA AL + ++G+
Sbjct: 376 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 413
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 12/314 (3%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R K+ K + + + N V T S ID ++G+ L + MERD G + + +
Sbjct: 327 RLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD-GCQPNAWTY 385
Query: 203 RLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
++ L ++ A L+ K + I P+ L++G C + D A RL M +
Sbjct: 386 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G + AY + D + K R ++ + + GV + LI
Sbjct: 446 NGLKPDEHAYAVLTDALCKAGRAEEAYSF----------IVRKGVALTKVYYTTLIDGFS 495
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
K ++ A L RM + GC P+ T+ VL+ +L + R+ E ++D+M G
Sbjct: 496 KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIF 555
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + + + + A ++ +M + GH P + TY + + +C R++ A L +
Sbjct: 556 AYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 615
Query: 442 VRNGVEVKPKEYRV 455
R GV Y +
Sbjct: 616 EREGVAPDVVTYNI 629
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 135/342 (39%), Gaps = 33/342 (9%)
Query: 135 SFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYG 194
+ TD + + + F+V L + ID +AG ERM D G
Sbjct: 456 AVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM-IDEG 514
Query: 195 FKRDKDSLRLVVEKLCENGYASYA-----EKLVKDTANEIFPDDKICDLLIKGWCVDGKL 249
D + +++ LC+ + A + ++ IF + D +++ +GK
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR----EGKH 570
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
D AKR+ EM G + Y ++ K R +D AE ++L ME GV +
Sbjct: 571 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED-------AEDLILKMEREGVAPD 623
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA--ARVGEGD-- 365
V T+N+LI + + A RM C PN T+ +L+K L + A V D
Sbjct: 624 VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTS 683
Query: 366 ------------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
++++RM G Y + C R+E+A + + M G +P
Sbjct: 684 GMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSP 743
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ + Y LL+ C +KA + G + + + YR+
Sbjct: 744 NEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 785
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 101/262 (38%), Gaps = 11/262 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
ID ++R G+ + M G K + + + C+ G AE L+ E
Sbjct: 561 IDEMLREGKHDHAKRMYNEMTSS-GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 619
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK----LCRK 284
+ PD ++LI G G +D A + M E Y +L + K R
Sbjct: 620 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 679
Query: 285 KDPFRLDSEAE-----KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
D + + E ++L M +G+ V T++ LI+ CK R E+A L M
Sbjct: 680 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 739
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G PNE + +LIK + + M G+ + Y + LC E+
Sbjct: 740 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 799
Query: 400 MSVFEKMKTDGHNPDSETYDLL 421
S+F + G+N D + +L
Sbjct: 800 KSLFCDLLELGYNHDEVAWKIL 821
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G+ + T+N +I + CK A + F + E G P T L+ + + +
Sbjct: 62 DGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRK 121
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+ M G + Y + LC + + +A+ +F MK DG +P+ + L++
Sbjct: 122 ACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLIS 181
Query: 424 KWCAHNRVDKANALFDEAVRNGV 446
C RV A LFD +NGV
Sbjct: 182 GLCKSGRVGDARLLFDAMPQNGV 204
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 9/273 (3%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDD 233
R+G + L F+ M D G + ++ +C+ G A+ LV + + I +
Sbjct: 342 RSGNVKRALVLFDEM-TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 400
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
I + LI G+C G +DEA RL M + G E AYN I + KL RK E
Sbjct: 401 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK-------DE 453
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A+ +L M GV N +F LI CK +A ++F M E G PN T+ VLI
Sbjct: 454 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 513
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+ + E ++ D +++ G + C +++ A+ +F++M G P
Sbjct: 514 GYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP 573
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ TY +++ R ++A L+DE G+
Sbjct: 574 NVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 606
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 30/227 (13%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
L P + ID +G + L ME+ G + D + + LC+ A+
Sbjct: 398 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKK-GLESDVFAYNSIASGLCKLNRKDEAKG 456
Query: 221 LVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L+ + P+ LI +C +G EAKR+ REM G + YN ++D S
Sbjct: 457 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 516
Query: 280 KLCRKKDPFRLDSEAE----------------------------KVLLDMEYNGVPRNVE 311
K K+ +L E E K+ +M G+ NV
Sbjct: 517 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 576
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
T+ +IS L K RSE+A KL+ M E G P++T + L+ SL+ A
Sbjct: 577 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLL 239
+ L FE ME+ GF D+ S + + L G + + N ++ ++
Sbjct: 173 EALEAFEHMEKK-GFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIV 231
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD-SEAEKVL 298
+ G C G ++ ++L E+ G + V YN ++ K RLD ++L
Sbjct: 232 LDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFK--------RLDLGGVAEIL 283
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME GV NV T+ +LI I + E+A +LF M E G + + +I ++
Sbjct: 284 TLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRS 343
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
V + D M G Y + +C ++E A + +M+ G + + +
Sbjct: 344 GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF 403
Query: 419 DLLMTKWCAHNRVDKA 434
+ L+ +C VD+A
Sbjct: 404 NTLIDGYCESGMVDEA 419
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 7/219 (3%)
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D++ C + + G++D R R M E+ + +LD LC++ D
Sbjct: 189 DERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD---GLCKRGDV---- 241
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
K++ ++ GV NV T+N I K ++ M + G N T+ +L
Sbjct: 242 EMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLL 301
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I ++ E + + M+ G Y ++ C +++A+ +F++M G
Sbjct: 302 IHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGL 361
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
P + TY L+ C +++ A L +E G+++ P
Sbjct: 362 IPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 400
>gi|357119779|ref|XP_003561611.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Brachypodium distachyon]
Length = 547
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 8/253 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G+ D + V++ LC+ G A K+ + ++ + P++ + +C G D A
Sbjct: 269 GYDIDAVTYTTVIDGLCKVGNIVDARKMWDEMVHKGMEPNEYAYCSFLGYYCKAGDFDMA 328
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
++ EM GF+ TV+ N IL + C R+D EA V M G+ +V T
Sbjct: 329 YKVYGEMLGKGFKESTVSCNIIL---AGFCVH---MRVD-EAISVFEGMVTEGIEHDVFT 381
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+N LI LCK+ R +AI+++ R+ G P +TF LI ++ + +V E+ M+
Sbjct: 382 YNTLIQGLCKVGRLAEAIRMYQRLLSSGLEPTVSTFTPLIDTMCEEGQVDHAVELFRLMQ 441
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G+ + + C R + AM+ M P +T++ L+ RVD
Sbjct: 442 AKGFEPLVRSNDSVINGFCKARRADDAMAWLAGMLKSNLKPQKQTFNSLLELLSTSERVD 501
Query: 433 KANALFDEAVRNG 445
A + + +++G
Sbjct: 502 DALLILNTMLKSG 514
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 105/270 (38%), Gaps = 8/270 (2%)
Query: 179 PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL 238
P V F F D D++ + + +L++D A P
Sbjct: 149 PDLVFNLFSTFSSSPDFPGDADTVSCLARACAADRRPLDGLRLLRDAARRGSPPSSAAAA 208
Query: 239 -LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+K + G + M G+ TV Y CI+ + ++ EA +V
Sbjct: 209 DLVKAFAASGNFPKVSDTLHLMISAGYPPDTVVYQCIIHGLFA-------HKMGGEALRV 261
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+++ G + T+ +I LCK+ DA K++ M G PNE + + +
Sbjct: 262 FNEIKLRGYDIDAVTYTTVIDGLCKVGNIVDARKMWDEMVHKGMEPNEYAYCSFLGYYCK 321
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
A ++ M G+ L C R+++A+SVFE M T+G D T
Sbjct: 322 AGDFDMAYKVYGEMLGKGFKESTVSCNIILAGFCVHMRVDEAISVFEGMVTEGIEHDVFT 381
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
Y+ L+ C R+ +A ++ + +G+E
Sbjct: 382 YNTLIQGLCKVGRLAEAIRMYQRLLSSGLE 411
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 9/266 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L + G ++ M G + ++ + + C+ G A K+ +
Sbjct: 276 TYTTVIDGLCKVGNIVDARKMWDEMVHK-GMEPNEYAYCSFLGYYCKAGDFDMAYKVYGE 334
Query: 225 TANEIFPDDKI-CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ F + + C++++ G+CV ++DEA + M G E YN ++ + K+ R
Sbjct: 335 MLGKGFKESTVSCNIILAGFCVHMRVDEAISVFEGMVTEGIEHDVFTYNTLIQGLCKVGR 394
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ R+ +++L +G+ V TF LI +C+ + + A++LF M G P
Sbjct: 395 LAEAIRM---YQRLL----SSGLEPTVSTFTPLIDTMCEEGQVDHAVELFRLMQAKGFEP 447
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ +I +A R + + M + K+ + L L ER++ A+ +
Sbjct: 448 LVRSNDSVINGFCKARRADDAMAWLAGMLKSNLKPQKQTFNSLLELLSTSERVDDALLIL 507
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHN 429
M G DS +L+ K C N
Sbjct: 508 NTMLKSGFGLDSLPCTILVDKLCTGN 533
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P + +T + L RR D ++L G P+ L+K+ + + +
Sbjct: 166 PGDADTVSCLARACAADRRPLDGLRLLRDAARRGSPPSSAAAADLVKAFAASGNFPKVSD 225
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ M SAGY Y + L + +A+ VF ++K G++ D+ TY ++ C
Sbjct: 226 TLHLMISAGYPPDTVVYQCIIHGLFAHKMGGEALRVFNEIKLRGYDIDAVTYTTVIDGLC 285
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEY 453
+ A ++DE V G+E P EY
Sbjct: 286 KVGNIVDARKMWDEMVHKGME--PNEY 310
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 15/289 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA----EKLVKDT 225
I RA R +RM ++ GF D + +++ LC G A +L+K+
Sbjct: 133 ITGFCRANRIDSAYQVLDRM-KNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKEN 191
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
P +LI+ + G +DEA +L EM + YN I + +CR+
Sbjct: 192 CK---PTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSI---IRGMCREG 245
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
R A +++ + G +V T+N+L+ L + E +L M GC N
Sbjct: 246 YVDR----AFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANV 301
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ VLI S+ + +V EG ++ MK G Y + LC R++ A+ V +
Sbjct: 302 VTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDV 361
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
M +DG PD Y+ ++ C R D+A ++F++ G Y
Sbjct: 362 MISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYN 410
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 8/248 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ +C GY A +++ +++ + D I ++L++G GK + L +M G
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
E V Y+ + +S +CR E +L DM+ G+ + ++ LI+ LCK
Sbjct: 297 CEANVVTYSVL---ISSVCRDGKV----EEGVGLLKDMKKKGLKPDGYCYDPLIAALCKE 349
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R + AI++ M GC P+ + ++ L + R E + +++ G + Y
Sbjct: 350 GRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSY 409
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ L +A+ + +M G +PD TY+ L++ C VD+A L +
Sbjct: 410 NSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEM 469
Query: 444 NGVEVKPK 451
E KP
Sbjct: 470 ESSECKPS 477
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD +C LI G +D+A ++ + G +AYN I ++ CR R+
Sbjct: 90 PDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHP-DLIAYNAI---ITGFCRAN---RI 142
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
DS A +VL M+ G ++ T+N+LI +LC + A++ ++ + C P T+ +
Sbjct: 143 DS-AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTI 201
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI++ + E +++D M Y + +C +++A + + + G
Sbjct: 202 LIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKG 261
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ PD TY++L+ + + L + V G E Y V
Sbjct: 262 YAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 123/310 (39%), Gaps = 41/310 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ R +AG + L +F R + G K D ++ L + A +++ N
Sbjct: 64 LSRSCKAGNFNESL-YFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG 122
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
PD + +I G+C ++D A ++ M GF V YN + + LC +
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNIL---IGSLCSRG---M 176
Query: 290 LDS----------------------------------EAEKVLLDMEYNGVPRNVETFNV 315
LDS EA K+L +M + ++ T+N
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNS 236
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I +C+ + A ++ + G P+ T+ +L++ L + G E++ M + G
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y ++ +C ++E+ + + + MK G PD YD L+ C RVD A
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356
Query: 436 ALFDEAVRNG 445
+ D + +G
Sbjct: 357 EVLDVMISDG 366
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 10/232 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G + + + +++ +C +G L+KD + D C D LI C +G++D A
Sbjct: 296 GCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLA 355
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+ M G V YN IL C LC++K R D EA + + G N +
Sbjct: 356 IEVLDVMISDGCVPDIVNYNTILAC---LCKQK---RAD-EALSIFEKLGEVGCSPNASS 408
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID--R 370
+N + S L A+ + M + G P+ T+ LI L + V E E++
Sbjct: 409 YNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDME 468
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
M+S+ Y L LC + R+ A+ V M G P+ TY L+
Sbjct: 469 MESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLI 520
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
W K+ A + EM G + + YN ++ C LCR + EA ++L+DME
Sbjct: 417 WSTGHKV-RALGMILEMLDKGVDPDGITYNSLISC---LCRDG----MVDEAIELLVDME 468
Query: 303 YNG--VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
+V ++N+++ LCK+ R DAI++ M + GC PNETT+ LI+ +
Sbjct: 469 MESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523
>gi|357451329|ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 29/304 (9%)
Query: 183 LGFFERMERDY-GFKRDKDSLRLVVEKLCENGYASYAE-KLVKDTAN-----EIFPDDKI 235
+ F M + + F DK + +++ C++ + Y+ L+ T N I PD
Sbjct: 122 IAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGT 181
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD--------- 286
DL ++ C ++D+A L +E+ +YN + V LC+ +
Sbjct: 182 VDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFL---VKNLCKSRTLSLVYPNLV 238
Query: 287 --PFRLDS--------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+D+ EA +++ +E G + +N ++ C + R +AI+++ RM
Sbjct: 239 TYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRM 298
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
E G P+ T+ LI L ++ RV E +++ M G+ + Y + +C
Sbjct: 299 KEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGET 358
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
A+++ E+M+ G +P++ TY+ L+ C DKA L+ +G+++ Y
Sbjct: 359 LAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATF 418
Query: 457 PRYL 460
R L
Sbjct: 419 VRAL 422
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 112/275 (40%), Gaps = 31/275 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKD------------------------TANEI 229
G DK ++ L V LC A +L+K+ T + +
Sbjct: 174 GISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLV 233
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
+P+ +LI C L EA RL + GF+ YN I+ L R
Sbjct: 234 YPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSR------ 287
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
SEA +V M+ GV ++ T+N LI L K R +A KL M E G P+E T+
Sbjct: 288 -GSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYT 346
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
L+ + + +++ M+ G + Y L LC ++AM ++ MK+D
Sbjct: 347 SLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSD 406
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
G D +Y + C+ RV A +FD AV +
Sbjct: 407 GLKLDMASYATFVRALCSVGRVADAYEVFDYAVES 441
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 32/329 (9%)
Query: 163 PKTLASC--IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
P L+ C + L R G+ + M R+ D + +V++ LC+ S A +
Sbjct: 8 PNALSYCYLVKALCRTGKIDKACSTIAEMARE-KLVPDVFTYNVVIDTLCKARRISRAIE 66
Query: 221 LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+ PD + L+ G C +G++ +A L M G V Y ++D K
Sbjct: 67 FFETMPE---PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 123
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+C+ + + L L M V ++ +I+ LCK R+ + A +LF M G
Sbjct: 124 MCQFETAYGL-------LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P+ T+ LI L R+ E +++ M + K + + LC +RI++A
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR-- 458
+F+ M G PD T+ +L++K C ++ A ++ VRN Y P
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSV----VRN--------YPACPEAV 284
Query: 459 YLKKPIAVKKGKKR-----ETLPEKMARK 482
L PI + G++R L +KMAR+
Sbjct: 285 ILYTPIFRELGRRRGFDRAARLLQKMARR 313
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 167/450 (37%), Gaps = 47/450 (10%)
Query: 39 NFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLE-----NLEADPLPISQRLH--LIFS 91
N LS + K ID IA +L+ N+ D L ++R+ + F
Sbjct: 9 NALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFF 68
Query: 92 HVTPTPSLV--QSTLNFSPEAGRAILGFNHWLT-QNANFSHTDETLSFFTDYFGRRKDFK 148
P P +V + L + GR + + + + A + +D T + D F + F+
Sbjct: 69 ETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 128
Query: 149 AIHDFL-VDNKEVLGPKTLASC--IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV 205
+ L + P + C I+ L + + Q FE M+ G K D+ + +
Sbjct: 129 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLA-GCKPDRVTYNTL 187
Query: 206 VEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LC A+ L+ F DKI LI+G C ++ EA L + M + G
Sbjct: 188 IHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 247
Query: 265 ELGTVAYNCILDCVSKLC--RKKDPF---------------------------RLDSEAE 295
V + + VSKLC RK P R A
Sbjct: 248 APDLVTHTVL---VSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAA 304
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++L M GV NV T+ L + A + F RM E G P+ + VL+
Sbjct: 305 RLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 364
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+A R+ ++M+ M +G Y + C ++E + M + G PD
Sbjct: 365 CKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDV 424
Query: 416 ETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
T+ L+ +VD A + + A+ G
Sbjct: 425 ATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C PN ++ L+K+L + ++ + I M Y + LC RI +A+
Sbjct: 6 CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 65
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
FE M PD TY+ L+ C + RV +A +LF G+
Sbjct: 66 EFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGI 107
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 24/328 (7%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G D + L + +LG I+ L RA R + ++++M R+ K D
Sbjct: 282 GYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE-NIKPDVML 340
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
+++ L + G + A L+ + D IC + LIKG+C G LDEA+ L E+
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEIS 400
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ Y+ IL C +C+ L ++A+ + +ME G +V TFN LI+ L
Sbjct: 401 KHDCFPNNHTYS-ILIC--GMCKNG----LINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453
Query: 321 CKIRRSEDAIKLFYRMGEWGCHP--------------NETTFLVLIKSLYQAARVGEGDE 366
CK R E+A LFY+M E P + + V+++ L ++ + + +
Sbjct: 454 CKANRLEEARLLFYQM-EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYK 512
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ ++ +G + Y + C I A +F++M+ GH PDS TY L+
Sbjct: 513 LLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLY 572
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYR 454
R + A +F++ V+ G + Y+
Sbjct: 573 RAGRNEDALEIFEQMVKKGCVPESSTYK 600
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANE 228
I L + GR T+ L M + G + D +++ C+ GY AE L ++ + ++
Sbjct: 345 IRGLSQEGRVTEALTLLGEMT-ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD 403
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
FP++ +LI G C +G +++A+ + +EM + G V +N +++ + K R ++
Sbjct: 404 CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEAR 463
Query: 289 RLDSEAEKV----LLDMEYNGVPR--NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
L + E V L G + ++ + V++ LC+ A KL ++ + G
Sbjct: 464 LLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVL 523
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ +LI + + ++ M+ G+ Y + L R E A+ +
Sbjct: 524 PDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEI 583
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN 444
FE+M G P+S TY +MT C N + A +++ + +R+
Sbjct: 584 FEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRD 625
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A + +M + V Y ++ + K C+ +D L E M G+ N
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDE-------MTDRGILPNQI 234
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+++++S LC+ ++ DA +LF +M GC+ + T+ VL+ ++ + + ++ +
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
G+ +G Y + L R E+A ++KM + PD Y +++ RV
Sbjct: 295 TKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRV 354
Query: 432 DKANALFDEAVRNGV 446
+A L E G+
Sbjct: 355 TEALTLLGEMTERGL 369
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 112/260 (43%), Gaps = 8/260 (3%)
Query: 204 LVVEKLC-ENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
L++ KL EN + Y + L + + I + +LI+ + G ++A M
Sbjct: 98 LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDF 157
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
+ A+N IL +K+ F L +L N +V T+ +LI LCK
Sbjct: 158 DCKPDLFAFNLIL----HFLVRKEAFLLALAVYNQMLKCNLNP---DVVTYGILIHGLCK 210
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+++DA+ LF M + G PN+ + +++ L QA ++ + + +M+++G
Sbjct: 211 TCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLIT 270
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y L C ++ A ++ + + DGH Y L+ R ++A+ + + +
Sbjct: 271 YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKML 330
Query: 443 RNGVEVKPKEYRVDPRYLKK 462
R ++ Y + R L +
Sbjct: 331 RENIKPDVMLYTIMIRGLSQ 350
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 13/216 (6%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
I PD ++L+ G+C D K+ E K + M + G V YN ++D
Sbjct: 142 NIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVD----------G 191
Query: 288 FRLDSE---AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+RL E A+ + M GV ++ ++N+LI+ CKI++ + A+ LF M PN
Sbjct: 192 YRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPN 251
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ LI L ++ R+ +++D+M G Y + L ++++A+++
Sbjct: 252 VVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALIT 311
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
K K G P TY +L+ C R+ A +F++
Sbjct: 312 KFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFED 347
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
TL + I L G+ Q F +++ GF D+ S ++ LC+ G A L++
Sbjct: 9 TLNTLIKGLCLKGQIHQAFLFHDKLVA-LGFHLDQVSYGTLIHGLCKVGETRAALDLLQR 67
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
++ + + + +I G C D +++A L EM G V Y+ ++ + +
Sbjct: 68 VDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGK 127
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
KD L K++L+ + + TFN+L+ CK R+ ++ +F M + G P
Sbjct: 128 LKDAIDL---FNKIILE----NIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ L+ V + + M G + Y + C I+++++AM++F
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+M P+ TY+ L+ R+ A L D+ GV
Sbjct: 241 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGV 283
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 42/245 (17%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK---------- 280
P+ + LIKG C+ G++ +A ++ GF L V+Y ++ + K
Sbjct: 5 PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64
Query: 281 ----------------------LCRKK---DPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
+C+ K D F L SE M G+ NV T++
Sbjct: 65 LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSE-------MVSKGISPNVVTYSA 117
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
LIS + + +DAI LF ++ P+ TF +L+ + ++ EG + M G
Sbjct: 118 LISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQG 177
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + ++ + A S+F M G NPD +Y++L+ +C +VDKA
Sbjct: 178 IIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAM 237
Query: 436 ALFDE 440
LF+E
Sbjct: 238 NLFNE 242
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 17/247 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN-----GYASYAE 219
T ++ I G+ + F ++ + K D + ++V+ C++ G +A
Sbjct: 114 TYSALISGFFVVGKLKDAIDLFNKIILE-NIKPDGYTFNILVDGFCKDRKMKEGKTVFAM 172
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+ I PD + L+ G+ + +++ AK + M +GG +YN +++
Sbjct: 173 MM----KQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFC 228
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K+ +K D +A + +M + NV T+N LI L K R A++L +M +
Sbjct: 229 KI-KKVD------KAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 281
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G PN T+ +I +L++ +V + +I + K G Y + LC R++ A
Sbjct: 282 GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDA 341
Query: 400 MSVFEKM 406
++FE +
Sbjct: 342 RNIFEDL 348
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G N T N LI LC + A ++ G H ++ ++ LI L +
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+++ R+ + Y + +C + + A ++ +M + G +P+ TY L++
Sbjct: 62 LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+ ++ A LF++ + +KP Y
Sbjct: 122 FFVVGKLKDAIDLFNKIILE--NIKPDGY 148
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 23/254 (9%)
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
K T+ I PD ++L+ +C +G++ EAK M + G + V YN ++D + C
Sbjct: 301 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMD---RYC 357
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ ++A+ + M + GV NV +++++I+ CKI+ + A+KLF M
Sbjct: 358 LVNEV----NKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIF 413
Query: 343 PNETTFLVLIKSLYQAARVGEG----DEMIDR------------MKSAGYAIGKKDYYEF 386
PN T+ LI L ++ R+ DEM DR +K G Y
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTIL 473
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ LC R+E A ++FE + G+N TY +++ +C D+A L + N
Sbjct: 474 IDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCC 533
Query: 447 EVKPKEYRVDPRYL 460
Y + R L
Sbjct: 534 IPNAVTYEIIIRSL 547
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V YN I+D +C+ K LD++A + +M + +V T+N LI+ C + + +D
Sbjct: 242 VMYNTIID---SMCKDK----LDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKD 294
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
AI LF +M +P+ TF +L+ + + RV E + M G Y +
Sbjct: 295 AIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMD 354
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
R C + + +A S+F M G + +Y +++ ++C VD+A LF E
Sbjct: 355 RYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKE 406
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 25/292 (8%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LV 222
T + I+ G+ +G F +M + D + ++V+ C+ G A+ L
Sbjct: 277 NTYNALINGFCIVGKLKDAIGLFNKMTSE-NINPDVYTFNILVDAFCKEGRVKEAKNGLA 335
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
I PD + L+ +C+ ++++AK + M G +Y+ + +++ C
Sbjct: 336 MMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIM---INRFC 392
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR----------------S 326
+ ++ +A K+ +M + + NV T++ LI LCK R
Sbjct: 393 K----IKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQ 448
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
D I L ++ + G PN T+ +LI L + R+ + + + + GY I Y
Sbjct: 449 PDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVM 508
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
+ C ++AM++ KMK + P++ TY++++ ++ DKA F
Sbjct: 509 IHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 89/234 (38%), Gaps = 46/234 (19%)
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+KL + + Y+E + K IFPD + LI G+C+ GKL +A L +M
Sbjct: 254 DKLDNDAFDLYSEMVSK----RIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTS----- 304
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
+ +V TFN+L+ CK R
Sbjct: 305 -------------------------------------ENINPDVYTFNILVDAFCKEGRV 327
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++A M + G P+ T+ L+ V + + + M G + Y
Sbjct: 328 KEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIM 387
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ R C I+ ++QAM +F++M P+ TY L+ C R+ A L DE
Sbjct: 388 INRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDE 441
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 35/139 (25%)
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N+ +N +I ++CK + DA L+ M P+ T+ LI
Sbjct: 240 NLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGF------------- 286
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
C + +++ A+ +F KM ++ NPD T+++L+ +C
Sbjct: 287 ----------------------CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 324
Query: 429 NRVDKANALFDEAVRNGVE 447
RV +A ++ G++
Sbjct: 325 GRVKEAKNGLAMMMKQGIK 343
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 9/282 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ ID G + L + M+ G K ++ + ++ LC+ G + AEK++++
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIK-GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
++ I PD+ + LI G+ G + A + EM + Y ++ + +
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVI 415
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+P + + +M G+ + T+ LI CK +A L M + G PN
Sbjct: 416 EP-------QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L + + +E++D M+ G + Y + +C IEQA+ + ++
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M+ G +PD+ TY ++ +C +DKA+ L E + G++
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 10/262 (3%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
F E + R G K D+ + +++ C+ G A L + + P+ LI G
Sbjct: 421 FHEMISR--GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C G+LD A L EM + G +L YN + V+ +C+ + +A K++ +ME
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSM---VNGICKAGNI----EQAIKLMKEMEV 531
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
G+ + T+ +I C++ + A KL M + G P TF VL+ + +
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
GD ++ M G Y + + C + ++++M+ G PDS TY++L+
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIK 651
Query: 424 KWCAHNRVDKANALFDEAVRNG 445
C + +A L+ E + G
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKG 673
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 10/286 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ SC L R ++ + ++ +YG + S +++ LC G A +L+
Sbjct: 224 TVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQ 283
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD +I G+C G+L +A +L +M G + YN I + LC+
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSI---ILLLCK 340
Query: 284 KKDPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
F EAEKVL +M +P NV + LI K+ A K F M
Sbjct: 341 IGKSF----EAEKVLREMMSQKIIPDNV-VYTTLIHGFFKLGHVRTANKWFDEMLSKKIS 395
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ LI+ Q +V E + M S G + Y + C + A S+
Sbjct: 396 PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSL 455
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+M G P+ TY L+ C H +D AN L DE + G+++
Sbjct: 456 HNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 131/298 (43%), Gaps = 25/298 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID +AG M + G + + +++ LC++G D
Sbjct: 435 TYTTLIDVYCKAGEMVNAFSLHNEMVQ-MGMTPNIVTYGALIDGLCKHGEL--------D 485
Query: 225 TANEIFPDDK---------ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
TANE+ + + I + ++ G C G +++A +L +EM G + + Y ++
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
D CR D +A K+L +M G+ V TFNVL++ C + ED +L
Sbjct: 546 DAY---CRLGDI----DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E G P+ T+ L+K + ++ RM++ G A Y + C
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+++A ++++M G+ P +Y+ L+ ++ ++ +A LF+E +G+ + Y
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIY 716
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 122/295 (41%), Gaps = 9/295 (3%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
++H+ +V T + ID L + G + M R G + + +V
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM-RKKGLQLNVCIYNSMVNG 512
Query: 209 LCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
+C+ G A KL+K+ I PD +I +C G +D+A +L +EM G +
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V +N +++ L +D +++L M G+ + T+N L+ C
Sbjct: 573 VVTFNVLMNGFCMLGMLED-------GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
K++ RM G P+ T+ +LIK +A + E + M GY Y +
Sbjct: 626 TTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
R ++I +A +FE+M+ G D E Y+ + V+ L DEA+
Sbjct: 686 KRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAI 740
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD+ LI +C G++ A L EM + G V Y ++D LC+ + L
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID---GLCKHGE---L 484
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+ A ++L +M G+ NV +N +++ +CK E AIKL M G P+ T+
Sbjct: 485 DT-ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I + + + + +++ M G + + C + +E + M G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD+ TY+ LM + C N ++ ++ GV Y +
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 118 NHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAG 177
N++ +++ +F+ D+ LS F +I DF A + + +
Sbjct: 14 NNFHSKSLHFNTLDDALSSFNRLLHMHPP-PSIVDF-------------AKLLTSIAKMK 59
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKIC 236
+ VL +M+ +G + +L +++ C +A L K PD
Sbjct: 60 HYSTVLSLSTQMDS-FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTF 118
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
LI+G CV+GK+ EA L +M GF+ V Y +++ LC+ + S A +
Sbjct: 119 TTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN---GLCKVGNT----SAAIR 171
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+L ME +V + +I +LCK R+ +A LF +M G P+ T+ L+ +L
Sbjct: 172 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 231
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
++++M ++ + + LC ++ +A + + M G PD
Sbjct: 232 NLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV 291
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNG 445
TY LM C + +D+A +FD VR G
Sbjct: 292 TYTTLMDGHCLQSEMDEAVKVFDMMVRKG 320
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M+ GVP NV T N+LI++ C + R A + ++ + G P+ TTF LI+ L +
Sbjct: 71 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 130
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+GE + D+M G+ Y + LC + A+ + M+ PD Y
Sbjct: 131 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 190
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
++ C +V +A LF + V G+
Sbjct: 191 IIDSLCKDRQVTEAFNLFSQMVGQGIS 217
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 120/313 (38%), Gaps = 27/313 (8%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFT--DYFGRRKDFKAIHDFLVDNKEVLGPKTLASCI 170
+I+ F LT A H LS T D FG + ++ L +
Sbjct: 44 SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN-------------ILINSF 90
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF 230
L R G VL ++ G + D + ++ LC G A L +E F
Sbjct: 91 CHLNRVGFAFSVLAKILKL----GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF 146
Query: 231 -PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
P+ LI G C G A RL R M +G + V Y I+D LC+ R
Sbjct: 147 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID---SLCKD----R 199
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+EA + M G+ ++ T+ L+ LC + + L +M P+ F
Sbjct: 200 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 259
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++ +L + +V E E++D M G Y + C +++A+ VF+ M
Sbjct: 260 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 319
Query: 410 GHNPDSETYDLLM 422
G PD +Y L+
Sbjct: 320 GFAPDVISYTTLI 332
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
VV+ LC+ G + A ++V + PD L+ G C+ ++DEA ++ M R G
Sbjct: 261 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 320
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
F ++Y +++ KKD L S E + L E P V+ V + K+
Sbjct: 321 FAPDVISYTTLIN-----AGKKDGGGLVSLQEVIGLVKE---TPDAVKGGAVEVIRKDKM 372
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+ E L M PN F ++ +L + +V E +++D M G
Sbjct: 373 KLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRG 424
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+DA+ F R+ P+ F L+ S+ + + +M S G
Sbjct: 27 DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 86
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ C + R+ A SV K+ GH PD T+ L+ C ++ +A LFD+ + G
Sbjct: 87 INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF 146
Query: 447 E 447
+
Sbjct: 147 Q 147
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 146/371 (39%), Gaps = 51/371 (13%)
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIH---DFLVDNKEVLGPKTLASCIDRLVRAGRPTQ 181
++ D T D + DFK++ D + K V+ K +A P +
Sbjct: 54 GSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEK 113
Query: 182 VLGFFERMERDYGFKRDKDSLR-------------------------------------- 203
+G F+RM ++ KR S
Sbjct: 114 AVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFN 173
Query: 204 LVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
LV++ +C+ G A ++ +D ++ PD L+ G C ++DEA L EM
Sbjct: 174 LVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQID 233
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G V +N + ++ LC+K D R+ K++ +M G N T+N LI LC
Sbjct: 234 GCFPSPVTFNVL---INGLCKKGDLARV----AKLVDNMFLKGCAPNEVTYNTLIHGLCL 286
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ E AI L RM C PN T+ +I L + R +G ++ M+ GY + +
Sbjct: 287 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYV 346
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y ++ L + ++AM +F++M ++ Y ++ C + D+A + E
Sbjct: 347 YSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406
Query: 443 RNGVEVKPKEY 453
N KP Y
Sbjct: 407 NN--RCKPNAY 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 122/305 (40%), Gaps = 30/305 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + +D L +A R + + + M+ D F + +++ LC+ G + KLV +
Sbjct: 206 TYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV-TFNVLINGLCKKGDLARVAKLVDN 264
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P++ + LI G C+ GKL++A L M V Y I++ + K R
Sbjct: 265 MFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGR 324
Query: 284 KKDPFRL----------------------------DSEAEKVLLDMEYNGVPRNVETFNV 315
D R+ EA ++ +M N ++
Sbjct: 325 ALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSA 384
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I LC+ + ++A+++ M C PN T+ L+K ++A + EM M
Sbjct: 385 VIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHN 444
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ + Y + LC ++++AM V+ +M G PD Y ++ V+ A
Sbjct: 445 FTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDAL 504
Query: 436 ALFDE 440
L++E
Sbjct: 505 QLYNE 509
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 151/359 (42%), Gaps = 27/359 (7%)
Query: 82 ISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETL--SFFTD 139
IS ++ S P + +N + GRA+ G H +E + + +
Sbjct: 294 ISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISG 353
Query: 140 YFGRRKDFKAIHDF--LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
F K +A+ F + + L ++ ID L R G+P + L M + K
Sbjct: 354 LFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNR-CKP 412
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLA 256
+ + +++ E G A ++ KD A F +++C +LI G C DGK+ EA +
Sbjct: 413 NAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVW 472
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+M G + VAY +++ +S +D +L +E +L E + P +V T+N+L
Sbjct: 473 AQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNE----MLCQEPDSQP-DVVTYNIL 527
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR-VGEGDEMIDRMKSAG 375
++ LCK AI L M + GC P+ T ++ +++L + +G E +D +
Sbjct: 528 LNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGL---- 583
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+ RL +R+ A + E M P T+ ++ C +V A
Sbjct: 584 -----------VVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAA 631
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G +GK EA +L +EM EL T+ Y+ ++D LCR P EA +VL
Sbjct: 350 LISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVID---GLCRDGKP----DEALEVL 402
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M N N T++ L+ + AI+++ M + NE + VLI L +
Sbjct: 403 SEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKD 462
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM--KTDGHNPDSE 416
+V E + +M G Y + L +E A+ ++ +M + PD
Sbjct: 463 GKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVV 522
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
TY++L+ C + + +A L + + G +
Sbjct: 523 TYNILLNALCKQSSISRAIDLLNSMLDRGCD 553
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 4/149 (2%)
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMG-EWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
+ F V+ K E A+ LF RM E+ C +F ++ + Q E +
Sbjct: 96 KCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYN 155
Query: 370 RMKSA-GYAIGKK--DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ A G I + + +C + ++ A+ +F M PD TY LM C
Sbjct: 156 HVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLC 215
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+R+D+A +L DE +G P + V
Sbjct: 216 KADRIDEAVSLLDEMQIDGCFPSPVTFNV 244
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 150/319 (47%), Gaps = 20/319 (6%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPK-TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
R K+ + + + ++ + +L + T + + L + G + L F E + F+ DK
Sbjct: 289 RIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE-ERRFRVDKVG 347
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL-----IKGWCVDGKLDEAKRLA 256
+V C G A+++V NE+F I D++ I G C + K+D+AK++
Sbjct: 348 YSAIVHSFCREGRMDKAKEIV----NEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 403
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL-LDMEYNGVPRNVETFNV 315
R+MY+ G + TV+Y +L+ LC+ + EA +++ + E +P N T++V
Sbjct: 404 RQMYKHGCKPNTVSYTALLN---GLCKNGNSL----EAREMMNMSEEXWWIP-NAITYSV 455
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ + +S +A L M + G P +LI+SL Q +V E +++ + G
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
A+ ++ + C + +E A+S+ + M +PD TY ++ R+++A
Sbjct: 516 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 575
Query: 436 ALFDEAVRNGVEVKPKEYR 454
L + +R G P YR
Sbjct: 576 KLAMKMLRVGWIPTPVTYR 594
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 160/371 (43%), Gaps = 36/371 (9%)
Query: 117 FNHWLTQNANFSHTDETLSFFTDYFGRR-----KDFKAI-HDFLVDN-----KEVLGPK- 164
F H L+++ H DE L F + RR + AI H F + KE++
Sbjct: 316 FVHMLSKHG---HGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372
Query: 165 ---------TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
T S I+ L + + Q +M + +G K + S ++ LC+NG +
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK-HGCKPNTVSYTALLNGLCKNGNS 431
Query: 216 SYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCI 274
A +++ + + P+ +L+ G+ +GK EA L REM + GF V N +
Sbjct: 432 LEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 491
Query: 275 LDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFY 334
+ LC+++ ++D EA++ + NG NV F +I C+ E A+ L
Sbjct: 492 ---IQSLCQEE---KVD-EAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544
Query: 335 RMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIE 394
M HP+ T+ +I +L + R+ E ++ +M G+ Y + + C +
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMG 604
Query: 395 RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE-Y 453
R+E + + EKM + Y+ ++ K C+ +++A L + +R ++ +
Sbjct: 605 RVEDLLKLLEKMLS--RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 662
Query: 454 RVDPRYLKKPI 464
+ YL K I
Sbjct: 663 MLIESYLSKGI 673
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 14/229 (6%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD IC+ I + +LD+A R M + YNC++ L R +D
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLED-- 257
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM-GEWGCHPNETT 347
A +++ +M + G + ++ ++ LCK +R ++ L +M + P++ T
Sbjct: 258 -----AXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVT 312
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAG---YAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ + L ++ G GDE ++ ++ A + + K Y + C R+++A +
Sbjct: 313 YNTFVHML---SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 369
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+M + G PD TY ++ C +VD+A + + ++G + Y
Sbjct: 370 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 418
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 6/212 (2%)
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
EI P+ + LIKG+C +L++A L EM G ++Y ++ LC++K
Sbjct: 234 EIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVM---GFLCKEKRI 290
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
L EK+L D N +P V T+N + L K ++A++ E ++
Sbjct: 291 KELRLLMEKMLKD--SNLLPDQV-TYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVG 347
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ ++ S + R+ + E+++ M S G Y + LC +++QA + +M
Sbjct: 348 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 407
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
G P++ +Y L+ C + +A + +
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMN 439
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 15/206 (7%)
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
AKR+ R M + E A+ ++ S+ + ++ R L M+ G+ ++
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMR-------XLTMMQKAGIEPDLS 205
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
N I L R + A++ RM PN T+ LIK R+ + E+I M
Sbjct: 206 ICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEM 265
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH-NPDSETYDLLMTKWCAHNR 430
G + K YY + LC +RI++ + EKM D + PD TY+ + H
Sbjct: 266 PFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGH 325
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVD 456
D+A EA + + +RVD
Sbjct: 326 GDEALEFLREA-------EERRFRVD 344
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 9/282 (3%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
++ ID G + L + M+ G K ++ + ++ LC+ G + AEK++++
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIK-GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355
Query: 227 NE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
++ I PD+ + LI G+ G + A + EM + Y ++ + +
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVI 415
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+P + + +M G+ + T+ LI CK +A L M + G PN
Sbjct: 416 EP-------QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ LI L + + +E++D M+ G + Y + +C IEQA+ + ++
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
M+ G +PD+ TY ++ +C +DKA+ L E + G++
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 9/282 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I + G+ + F M G K D+ + +++ C+ G A L +
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEM-ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ LI G C G+LD A L EM + G +L YN + V+ +C+
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM---VNGICK 515
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +A K++ +ME G+ + T+ +I C++ + A KL M + G P
Sbjct: 516 AGNI----EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
TF VL+ + +GD ++ M G Y + + C + ++
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++M+ G PDS TY++L+ C + +A L+ E + G
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 10/286 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T+ SC L R ++ + ++ +YG + S +++ LC G A +L+
Sbjct: 224 TVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQ 283
Query: 225 T-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
PD +I G+C G+L +A +L +M G + YN I + LC+
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSI---ILLLCK 340
Query: 284 KKDPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
F EAEKVL +M +P NV + LI K+ A K F M
Sbjct: 341 IGKSF----EAEKVLREMMSQKIIPDNV-VYTTLIHGFFKLGHVRTANKWFDEMLSKKIS 395
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ LI+ Q +V E + M S G + Y + C + A S+
Sbjct: 396 PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSL 455
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+M G P+ TY L+ C H +D AN L DE + G+++
Sbjct: 456 HNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 130/298 (43%), Gaps = 25/298 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID +AG M + G + + +++ LC++G D
Sbjct: 435 TYTTLIDVYCKAGEMVNAFSLHNEMVQ-MGMTPNIVTYGALIDGLCKHGEL--------D 485
Query: 225 TANEIFPDDK---------ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
TANE+ + + I + ++ G C G +++A +L +EM G + + Y ++
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
D CR D +A K+L +M G+ V TFNVL++ C + ED +L
Sbjct: 546 D---AYCRLGDI----DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M E G P+ T+ L+K + ++ RM++ G A Y + C
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+++A ++++M G+ P +Y+ L+ ++ + +A LF+E +G+ + Y
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIY 716
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 120/295 (40%), Gaps = 9/295 (3%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
++H+ +V T + ID L + G + M R G + + +V
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM-RKKGLQLNVCIYNSMVNG 512
Query: 209 LCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
+C+ G A KL+K+ I PD +I +C G +D+A +L +EM G +
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V +N +++ L +D +++L M G+ + T+N L+ C
Sbjct: 573 VVTFNVLMNGFCMLGMLED-------GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
K++ RM G P+ T+ +LIK +A + E + M GY Y +
Sbjct: 626 TTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
R + +A +FE+M+ G D E Y+ + V+ L DEA+
Sbjct: 686 KRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAI 740
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 7/225 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD+ LI +C G++ A L EM + G V Y ++D LC+ + L
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID---GLCKHGE---L 484
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+ A ++L +M G+ NV +N +++ +CK E AIKL M G P+ T+
Sbjct: 485 DT-ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I + + + + +++ M G + + C + +E + M G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
PD+ TY+ LM + C N ++ ++ GV Y +
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 8/256 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLD 250
D+G + + V++ LC+ AE +++ +E I P+ + LI G+ G+
Sbjct: 280 DHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWT 339
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA R+ +EM R G V Y+ ++DC LC+ L +EA ++ M +G N
Sbjct: 340 EAVRILKEMSRDGQRPNVVTYSMLIDC---LCKSG----LHAEAREIFNSMIQSGQKPNA 392
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ L+ D + M + G P F + I + + R+ E ++
Sbjct: 393 STYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNK 452
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ G+ Y + LC I R++ AMS F +M DG +PD T++ L+ + H +
Sbjct: 453 MQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGK 512
Query: 431 VDKANALFDEAVRNGV 446
+KA LF E + G+
Sbjct: 513 WEKAEELFYEMMDRGI 528
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 111/281 (39%), Gaps = 24/281 (8%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ + ++++ G Q + F + KR D++ +V+ ++ E G
Sbjct: 165 AALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCT------------ 212
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
PD L+KG C + K +EA L M G NC + VS
Sbjct: 213 ---PDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDG-------DNCPPNVVSYTTVIHGF 262
Query: 288 FRLD--SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
F+ +A + M +G+P NV T N +I LCK++ + A + +M + PN
Sbjct: 263 FKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNC 322
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
TT+ LI + + E ++ M G Y + LC +A +F
Sbjct: 323 TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNS 382
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M G P++ TY L+ + + N + D V+NG+
Sbjct: 383 MIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM 423
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 127/301 (42%), Gaps = 9/301 (2%)
Query: 148 KAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
+A+ ++D + T S I + +G+ T+ + + M RD G + + + ++++
Sbjct: 307 EAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD-GQRPNVVTYSMLID 365
Query: 208 KLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
LC++G + A ++ P+ L+ G+ +G L + + M + G
Sbjct: 366 CLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRP 425
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
G +N + K C + D EA M+ G ++ + +I LCKI R
Sbjct: 426 GRHVFNIEIYAYCK-CGRLD------EASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRL 478
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
+DA+ F +M + G P+ TF LI + + +E+ M G +
Sbjct: 479 DDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSM 538
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ +L ++ +A +F+ M G P+ +Y+ ++ + V + L D+ + G+
Sbjct: 539 IDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL 598
Query: 447 E 447
+
Sbjct: 599 K 599
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 121/333 (36%), Gaps = 55/333 (16%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA---SY 217
LGP+ D L++ RP + + + R V +G A S
Sbjct: 78 LGPEDALDLFDELLQRARPGSIYALNQLL---------TTVARAPVSSSVRDGPALAVSM 128
Query: 218 AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
++ + A ++ PD +LI C G L+ ++ + G V + +L
Sbjct: 129 FNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLL-- 186
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
LC +K R VL M G +V ++ L+ LC ++ E+A +L + M
Sbjct: 187 -RTLCAEK---RTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMA 242
Query: 338 EWG--CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
E G C PN ++ +I ++ VG+ + +M G + LC ++
Sbjct: 243 EDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 302
Query: 396 IEQAMSVFEKM-----------------------------------KTDGHNPDSETYDL 420
+++A +V ++M DG P+ TY +
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
L+ C +A +F+ +++G + Y
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTY 395
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
GFK + +++ + ++ L ++ +++ I P+ ++LI G CV+G L +A
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L ++M GF V YN +L+ K R K L M G+ +V T
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDY-------MICKGIEADVCT 305
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NV I NLC RS A L +M + PNE T+ LI + ++G ++ + M
Sbjct: 306 YNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS 365
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y + C + E+A+ + + M+ G + TY L+ C H + +
Sbjct: 366 KFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFE 425
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
A L + N + V Y V
Sbjct: 426 LAKRLLERMRVNDMVVGHIAYTV 448
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 37/275 (13%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++++ LC+NG A +LV + + + PD LI G+C G + AK + MYR
Sbjct: 448 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 507
Query: 263 GFELGTVAYN-------------------CILDC-------------VSKLCRKKDPFRL 290
G L + Y+ +++C VS LCR
Sbjct: 508 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL--- 564
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EAEK L M G+ N T++ +I+ I +A F M + G HP+ T+
Sbjct: 565 -GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS 623
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+K L + + E + ++R+ A+ Y L C + +A+++F+KM +
Sbjct: 624 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 683
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PDS TY L+T C + A LF A+ G
Sbjct: 684 VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG 718
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 139/325 (42%), Gaps = 12/325 (3%)
Query: 126 NFSHTDETLSFFTDYFGRRKDFKA---IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQV 182
F T T + +++ ++ +KA + D+++ T ID L R +
Sbjct: 263 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 322
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIK 241
++M ++ ++ + ++ + G A ++ + + ++ P+ + LI
Sbjct: 323 YLLLKKMRKEM-ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG 381
Query: 242 GWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM 301
G C G +EA RL M G L V Y +L+ LC K + F L A+++L M
Sbjct: 382 GHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLN---GLC-KHEKFEL---AKRLLERM 434
Query: 302 EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
N + + VLI LCK ++A++L M + G +P+ T+ LI + +
Sbjct: 435 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 494
Query: 362 GEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
E+I RM +G + K Y + C + +AM V+ M +GH D T ++L
Sbjct: 495 KSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVL 554
Query: 422 MTKWCAHNRVDKANALFDEAVRNGV 446
++ C ++ +A R G+
Sbjct: 555 VSSLCRDGKLGEAEKFLCHMSRIGL 579
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 121/319 (37%), Gaps = 31/319 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-K 223
T S + L + G + F R+ G D ++ + C++G A L K
Sbjct: 620 TYGSLLKGLCKGGNLVEAKKFLNRLHYIPG-AVDSVMYNTLLAETCKSGNLHEAVALFDK 678
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRL-AREMYRGGFELGTVAYNCILDCVSKLC 282
N + PD L+ G C GK A L M RG V Y C++D +SK
Sbjct: 679 MVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAG 738
Query: 283 RKKDPFRL-----------DSEAEKVLLD-----------------MEYNGVPRNVETFN 314
K F D+ A ++D M + GV N+ T+N
Sbjct: 739 HPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 798
Query: 315 VLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSA 374
+L+ K + + L+ M G P++ TF LI L ++ G +++ +M
Sbjct: 799 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 858
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G + + + + ++ +A + M T G PD +TY+ + + ++
Sbjct: 859 GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 918
Query: 435 NALFDEAVRNGVEVKPKEY 453
+ E + NGV K +Y
Sbjct: 919 TVVLHEMLENGVIPKHAQY 937
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 118/307 (38%), Gaps = 13/307 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L ++G P + +M + G D+ + +++ K E+G A LV
Sbjct: 831 TFHSLILGLSKSGIPDLGVKLLGKMIME-GTLADQFTFNILINKYSESGKMRKAFDLVNF 889
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+FPD + + G E+ + EM G Y +++ + ++
Sbjct: 890 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 949
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ F+L E ME G + + ++ L ++EDA+ + M P
Sbjct: 950 IQGAFKLKDE-------MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1002
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
TF L+ + A++ E ++ M+ G + Y + +C A ++
Sbjct: 1003 TIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELY 1062
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
E+M+ P+ TY +L+ A N + + L + G+ + ++L K
Sbjct: 1063 EEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL----ISWGGSTQHLDKE 1118
Query: 464 IAVKKGK 470
+ V GK
Sbjct: 1119 LTVAMGK 1125
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 42/183 (22%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G +V T N++++++ K +R+E LF M + G PN TF +LI L
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGL--------- 243
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
C +++A ++ ++M+ +G P TY+ L+
Sbjct: 244 --------------------------CVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV-------DPRYLKKPIAVKKGKKRETLPE 477
+C R A L D + G+E Y V + R K + +KK +K P
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337
Query: 478 KMA 480
++
Sbjct: 338 EVT 340
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 9/282 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
LV +G L + RM G ++ + ++++ LC+ G A A K+ + + I P
Sbjct: 182 LVDSGVILLALALYNRMVAA-GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP 240
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ KI +L+ C GK+DEA +L M G V YN L + K+ R + F
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF--- 297
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ L+ ++ G ++ ++ LI L + RR ++ + M E P+ + ++
Sbjct: 298 ----QRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I+ +A R+ + +D MK G+ Y L LC +E+A ++ +M +
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
DS T +++ C VD+A +FDE +G + Y
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 42/251 (16%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P + + ++K G + A L M G YN ++D LC++ +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMD---GLCKQG----M 222
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A K+ +M G+ NV+ + VL+S+LC + ++A++L M + GC P+E T+
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY--------------------------- 383
+ L + RV E + + ++ G+A+G K Y
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342
Query: 384 -------YEFLTRLCG-IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + R C RIE A+S + MK G PD+ Y+ ++ C H +++A+
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402
Query: 436 ALFDEAVRNGV 446
L E ++N +
Sbjct: 403 TLRSEMLQNNL 413
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 34/295 (11%)
Query: 173 LVRAGRPTQVLGFFER--MERDYGFKRDKDSLRLVVEKLCE-----NGYASYAEKLVKDT 225
L + GR + F+R M +D GF +++ L + G+ Y L ++
Sbjct: 287 LCKVGRVNEA---FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN- 342
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
I PD + ++I+G G++++A M + GF T YN +L LC
Sbjct: 343 ---ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV---LCDHG 396
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D R A + +M N + + T ++I LCK ++A+++F MGE GC P
Sbjct: 397 DLER----AHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTV 452
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMK-------------SAGYAIGKKDYYEFLTRLCG 392
T+ LI Y+ R+ E + +M+ A + + + +C
Sbjct: 453 MTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQ 512
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++ +A + + G PD TY+ L+ C +D A LF E G+
Sbjct: 513 SGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGIS 567
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 43/270 (15%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDK 234
AGR L F + M++ GF D V++ LC++G A L + N + D
Sbjct: 360 AGRIEDALSFLDVMKKK-GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL---- 290
++I G C G +DEA ++ EM G + + YN ++D + R ++ L
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 291 --------------------DSE-----------------AEKVLLDMEYNGVPRNVETF 313
DSE A K+L + +GV +V T+
Sbjct: 479 EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTY 538
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LI+ LCK R + A++LF + G P+E T+ LI L +A R + + +
Sbjct: 539 NTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+G + Y + LC ++++ QA++++
Sbjct: 599 SGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 288 FRLDSEAEKV----LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW---- 339
RL S A++ L D G+P + F L++ R DA++ F RM E+
Sbjct: 111 LRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRP 170
Query: 340 -------------------------------GCHPNETTFLVLIKSLYQAARVGEGDEMI 368
GC PN T+ VL+ L + G+ +M
Sbjct: 171 TAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMF 230
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
D M G K Y L+ LC +I++A+ + MK G PD TY+ ++ C
Sbjct: 231 DEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKV 290
Query: 429 NRVDKA 434
RV++A
Sbjct: 291 GRVNEA 296
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 120/332 (36%), Gaps = 87/332 (26%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERD------------YGFKRDKDSLRLVVEKLCEN 212
T + ID R GR + F +ME RD +SLR +V +C++
Sbjct: 454 TYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQS 513
Query: 213 GYASYAEKLVKDTANE-IFPDDKICDLLIKGWC--------------------------- 244
G A KL++ + + PD + LI G C
Sbjct: 514 GQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITY 573
Query: 245 ---VDGKL-----DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR------------- 283
+DG L ++A L + + + G YN ++ LCR
Sbjct: 574 GTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM---RSLCRMKKLSQAINLWLD 630
Query: 284 ---KKDPFRLDSEA------------------EKVLLDMEYNGVPRNVETFNVLISNLCK 322
KK F ++SE E + +D EY + N + + + LC+
Sbjct: 631 YLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSN--PYTIWLIGLCQ 688
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+RR++DA+++F+ + E+G +LI L + +++ S + +
Sbjct: 689 VRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPV 748
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L LC R + A ++ +M G++ D
Sbjct: 749 GNRLLRWLCICYRRQDAQALAWRMHLVGYDMD 780
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 17/319 (5%)
Query: 154 LVDNKEVL-GPKTLASCIDRLVRAGRPTQV--LGFFERMERDYGFKRDKDSLRLVVEKLC 210
++DN +L G K A C L G+ + + R +D + + +++ LC
Sbjct: 139 ILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLC 198
Query: 211 ENGYASYAEKLVKDTANE-------IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+ A ++ + E + PD + + LI G C G+ +EA L +M
Sbjct: 199 KFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQ 258
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
T +NC+ ++ CR + A K+ +ME + NV T N L+ +CK
Sbjct: 259 CAPTTATFNCL---INGYCRSGEI----EVAHKLFNEMENAQIEPNVITLNTLVDGMCKH 311
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R A++ F M + G N T+ V I + + + E +D M G Y
Sbjct: 312 NRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVY 371
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
Y + L R++ A SV K+K G D Y++L++++C N++D+A +E
Sbjct: 372 YTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMEL 431
Query: 444 NGVEVKPKEYRVDPRYLKK 462
GV+ Y Y K
Sbjct: 432 AGVKPDSVTYNTLISYFSK 450
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 131/328 (39%), Gaps = 49/328 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-----ERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
T I+ L + R L FE+M E D +++ LC+ G A
Sbjct: 189 TFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEAL 248
Query: 220 KLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
L+ K +++ P + LI G+C G+++ A +L EM E + N ++D +
Sbjct: 249 CLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGM 308
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
K R S A + M+ G+ N T+ V I+ C + A++ M +
Sbjct: 309 CKHNRI-------STAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSK 361
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
GC P+ + LI L QA R+ + ++ ++K AG+ + + Y ++ C ++++
Sbjct: 362 DGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDR 421
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMT----------------------------------- 423
A +M+ G PDS TY+ L++
Sbjct: 422 AQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALI 481
Query: 424 -KWCAHNRVDKANALFDEAVRNGVEVKP 450
+C +N +D+A +F E +V P
Sbjct: 482 HAYCLNNNIDEAIKIFKEMNNVASKVPP 509
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 133/304 (43%), Gaps = 21/304 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-NGYASYAEKLVK 223
TL + +D + + R + + FF M++ G K + + + + C N E L +
Sbjct: 300 TLNTLVDGMCKHNRISTAVEFFRVMQQK-GLKGNNVTYTVFINAFCNVNNMNKAMEFLDE 358
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + FPD + LI G G+LD+A + ++ GF L V YN + +S+ C+
Sbjct: 359 MSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVL---ISEFCK 415
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW-GCH 342
K +LD A++ L +ME GV + T+N LIS KI + A K +M E G
Sbjct: 416 KN---KLD-RAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLS 471
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAI--GKKDYYEFLTRLCGIERIEQAM 400
P T+ LI + + E ++ M + + Y + LC ++ A+
Sbjct: 472 PTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFAL 531
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYL 460
S+ + MK G P++ TY+ + N +DKA L D V E +P Y+
Sbjct: 532 SLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMV---------EQACNPDYI 582
Query: 461 KKPI 464
I
Sbjct: 583 TMEI 586
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLLIKGWCVDGKLDE 251
G K D + ++ + G A K +K E + P LI +C++ +DE
Sbjct: 433 GVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDE 492
Query: 252 AKRLAREMYRGGFEL--GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
A ++ +EM ++ TV YN ++D LC++ + A +L DM++ GV N
Sbjct: 493 AIKIFKEMNNVASKVPPNTVIYNILID---SLCKQTQV----NFALSLLDDMKFRGVMPN 545
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARV 361
T+N + L + A KL RM E C+P+ T +L + L +
Sbjct: 546 TTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEI 597
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 14/259 (5%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++V+ C G A+ L+ + + I P I LI G C + KL EA+ + R+M
Sbjct: 191 VLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDS 250
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G YN ++D K K L + +LD +G+ NV TF +LI LCK
Sbjct: 251 GVFPNLYTYNVLMDGYCKTANVKQALHL----YQGMLD---DGLQPNVVTFGILIDALCK 303
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+R A + F +M ++G PN F LI +A E +++ M+ +
Sbjct: 304 VRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFT 363
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD------KANA 436
Y + C + +E+A + ++M+ +G +S Y+ L+ +C ++ KA
Sbjct: 364 YSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATK 423
Query: 437 LFDEAVRNGVEVKPKEYRV 455
F + RNG+ Y V
Sbjct: 424 FFSDMRRNGLRPDALAYAV 442
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 18/213 (8%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI + G +DEA R+ ++ G F A N +L+ + KK F +
Sbjct: 124 VLIIAFSEVGLVDEALRVYLKV--GAFP-AVQACNALLNGL----LKKSSF-------DI 169
Query: 298 LLDMEYNGVPR----NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
+ ++ N V R V T+NVL+ C+ A L M + G P + LI
Sbjct: 170 MWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIH 229
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L +++ E + M +MK +G Y + C ++QA+ +++ M DG P
Sbjct: 230 GLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQP 289
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ T+ +L+ C + A F + + GV
Sbjct: 290 NVVTFGILIDALCKVRELLAARRFFVQMAKFGV 322
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
L EA +V L + G V+ N L++ L K + +L+ M P T+
Sbjct: 134 LVDEALRVYLKV---GAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYN 190
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
VL+ + + V +I M G Y + LC ++ +A S+F +MK
Sbjct: 191 VLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDS 250
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G P+ TY++LM +C V +A L+ + +G++
Sbjct: 251 GVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQ 288
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 3/184 (1%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ID L + FF +M + +G + +++ + G S A L+ +
Sbjct: 293 TFGILIDALCKVRELLAARRFFVQMAK-FGVVPNVVVFNSLIDGYSKAGNCSEATDLLLE 351
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+I PD +LIK C G ++EA + + M + G +V YN ++D K
Sbjct: 352 MEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGN 411
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ + +A K DM NG+ + + V++ + D + L M + G P
Sbjct: 412 MEKALEI-FKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVP 470
Query: 344 NETT 347
NE T
Sbjct: 471 NEVT 474
>gi|21553611|gb|AAM62704.1| unknown [Arabidopsis thaliana]
Length = 463
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 150/362 (41%), Gaps = 33/362 (9%)
Query: 118 NHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAG 177
N L A+ + D+T+ FF + +F+ G T + RA
Sbjct: 89 NSVLQSYASIAVVDDTVKFFQHIMKSQPNFRP------------GRSTFLILLSHACRA- 135
Query: 178 RPTQVLGFFERMER---DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDD 233
P + R+ + G + D+ + + V LCE G A+ L+K+ T PD
Sbjct: 136 -PDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDT 194
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL--GTVAYNCILDCVSKLCRKKDPFRLD 291
+ L+K C L EM R F++ V++ ++D V C K+ R
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDNV---CNSKN-LR-- 247
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
EA ++ + G + +N ++ C + + +A+ ++ +M E G P++ T+ L
Sbjct: 248 -EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A RV E + M AGY Y + +C A+S+ E+M+ G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGC 366
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
P+ TY+ L+ C +DK L++ +GV+++ Y R L VK GK
Sbjct: 367 APNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSL-----VKSGKV 421
Query: 472 RE 473
E
Sbjct: 422 AE 423
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLI 240
V F + M D+ K D S ++++ +C + A LV N F PD + + ++
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIM 272
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
KG+C K EA + ++M G E + YN ++ +SK R + EA L
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE-------EARMYLKT 325
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G + T+ L++ +C+ S A+ L M GC PN+ T+ L+ L +A
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ +G E+ + MKS+G + Y + L ++ +A VF+ D+ Y
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYST 445
Query: 421 LMT--KW 425
L T KW
Sbjct: 446 LETTLKW 452
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 138/328 (42%), Gaps = 17/328 (5%)
Query: 127 FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGP-KTLASCIDRLVR----AGRPTQ 181
F+H +T R + F + + D + P K + L+R AGR
Sbjct: 79 FTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYES 138
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE--IFPDDKICDLL 239
+ F R+ D+G KR SL ++ L +N + K++ I P+ C+LL
Sbjct: 139 SMRIFLRIP-DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 197
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE-AEKVL 298
+K C ++ A ++ E+ G V Y IL R D E A++VL
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA--------RGDMESAKRVL 249
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M G + T+ VL+ CK+ R +A + M + PNE T+ V+I++L +
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ GE M D M + + + LC ++++A ++ KM + PD+
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
L+ C RV +A LFDE + +
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFEKGSI 397
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 9/307 (2%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
++L + ++ L++ R V F+ + +G + + L+V+ LC+ A K++
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 224 DTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + + P+ ++ G+ G ++ AKR+ EM G+ Y ++D KL
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R SEA V+ DME N + N T+ V+I LCK ++S +A +F M E
Sbjct: 276 RF-------SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ + +I +L + +V E + +M + LC R+ +A +
Sbjct: 329 PDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL 388
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
F++ + G P TY+ L+ C + +A L+D+ + Y V L K
Sbjct: 389 FDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447
Query: 463 PIAVKKG 469
VK+G
Sbjct: 448 NGNVKEG 454
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 13/254 (5%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
GR + + D + N+ T I L + + + F+ M + F D
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM-LERSFMPDSS 332
Query: 201 SLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
V++ LCE+ A L K N PD+ + LI C +G++ EA++L E
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
+G + YN + ++ +C K + +EA ++ DM N T+NVLI
Sbjct: 393 EKGSIP-SLLTYNTL---IAGMCEKGEL----TEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM-IDRMKSAGYAI 378
L K ++ +++ M E GC PN+TTFL+L + L + + E D M I M +
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK--EEDAMKIVSMAVMNGKV 502
Query: 379 GKKDYYEFLTRLCG 392
K+ + FL + G
Sbjct: 503 DKESWELFLKKFAG 516
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 23/271 (8%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +D + GR ++ + ME++ + ++ + +++ LC+ + A + +
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKN-EIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD------C 277
F PD +C +I C D K+DEA L R+M + NC+ D
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN---------NCMPDNALLSTL 372
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ LC++ +EA K+ + E +P ++ T+N LI+ +C+ +A +L+ M
Sbjct: 373 IHWLCKEGRV----TEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E C PN T+ VLI+ L + V EG +++ M G K + L + + E
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
AM + +G D E+++L + K+
Sbjct: 488 DAMKIVSMAVMNG-KVDKESWELFLKKFAGE 517
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 3/178 (1%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE-WGCHPNETTFLVLIKSLYQAARVGE 363
GV R+V + N L++ L + +R + +F E +G PN T +L+K+L + +
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
+++D + S G Y L +E A V E+M G PD+ TY +LM
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 424 KWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMAR 481
+C R +A + D+ +N +E Y V R L K K G+ R E + R
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK--EKKSGEARNMFDEMLER 325
>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 733
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 158/384 (41%), Gaps = 33/384 (8%)
Query: 97 PSLVQSTLN--FSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL 154
PSLV + L+ SPE L F W+ + F+HT ET GR L
Sbjct: 86 PSLVYNVLHGAASPEHA---LQFYRWVERAGLFTHTPETTLKIVQILGRYSKLNHARCIL 142
Query: 155 VDN------KEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
++ + + S ID RAG + + F++M ++ G R S + +
Sbjct: 143 FNDTRGGVSRAAVTEDAFVSLIDSYGRAGIVQESVKLFKKM-KELGLDRTVKSYDALFKV 201
Query: 209 LCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
+ G A++ E + P ++L+ G + +LD A R +M G
Sbjct: 202 ILRRGRYMMAKRYYNAMLLEGVDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPD 261
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
V YN +++ + F+ EAEK+ ++M+ + NV +F ++ R +
Sbjct: 262 VVTYNTLINGYFR-------FKKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGRID 314
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
DA+K+F M G PN TF L+ L A ++ E +++ M I KD F+
Sbjct: 315 DALKVFEEMKGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEM--VERYIAPKDNALFM 372
Query: 388 TRL---CGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV-- 442
+ C ++ A V + M ++ Y +L+ +C N DKA L D+ +
Sbjct: 373 KMMSCQCKAGDLDAAADVLKAMVRLSIPTEAGHYGVLIESFCKANVYDKAEKLLDKLIEK 432
Query: 443 ------RNGVEVKPKEYRVDPRYL 460
+N E++P Y + YL
Sbjct: 433 EIVLRPQNDSEMEPSAYNLMIGYL 456
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERM-------ERDYGFKR--DKDSLR-------LVVEK 208
T ++ ID +AG+ + FERM + D FK+ D +S R +++
Sbjct: 590 TYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDG 649
Query: 209 LCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
C+ A KL+ + E P+ + D LI G C GKLDEA+ + EM GF
Sbjct: 650 FCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPAT 709
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
Y+ ++D K+ R+ A KVL M N NV + +I LCK+ +++
Sbjct: 710 LYTYSSLIDRYFKVKRQ-------DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
+A KL M E GC PN T+ +I + ++ E+++RM S G A Y +
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLI 822
Query: 388 TRLCGIERIEQAMSVFEKMK 407
C ++ A ++ E+MK
Sbjct: 823 DHCCKNGALDVAHNLLEEMK 842
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 198 DKDSLRLVVEKLCENGYASY-AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
DKDSL + +L E Y+ A +V + N + C GK ++A +
Sbjct: 420 DKDSLSCHLLELAEKAYSEMLATGVVLNKIN--------VSSFTRCLCSAGKYEKAFSVI 471
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
REM GF T Y+ +L + + + F L E M+ G+ +V T+ ++
Sbjct: 472 REMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEE-------MKRGGLVADVYTYTIM 524
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
+ + CK E A K F M E GC PN T+ LI + +A +V +E+ + M S G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE-----------------TYD 419
Y + C ++E+A +FE+M PD + Y
Sbjct: 585 LPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYG 644
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ +C +RV++A L D G E
Sbjct: 645 ALLDGFCKLHRVEEARKLLDAMSMEGCE 672
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 110/279 (39%), Gaps = 27/279 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D +AG Q +F M R+ G + + ++ + SYA +L + +E
Sbjct: 525 VDSFCKAGLIEQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
P+ LI G C G++++A ++ FE ++C KD
Sbjct: 584 CLPNIVTYSALIDGHCKAGQMEKACQI--------FE--------------RMCGSKDVP 621
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+D ++ D N NV + L+ CK+ R E+A KL M GC PN+ +
Sbjct: 622 DVDMYFKQYDDD---NSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVY 678
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI L + ++ E E+ M G+ Y + R ++R + A V KM
Sbjct: 679 DALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 738
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+ P+ Y ++ C + D+A L G +
Sbjct: 739 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 777
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 145/405 (35%), Gaps = 58/405 (14%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLV----DNKEVLGPKTLAS 168
A++ F W + + HT + D R D K + L D+KEV G + L
Sbjct: 147 AVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFG-EFLNV 205
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFK-------------------------------- 196
+ + R+G + L R+ +D+ F+
Sbjct: 206 LVRKYCRSGSFSIALEELGRL-KDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLA 264
Query: 197 ---RDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
D +LR LC+ G + E L PD LI G C +EA
Sbjct: 265 NLRMDGFTLRCYAYSLCKVG--KWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 254 RLAREMYRGGFELGTVAYNCIL-DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
M V Y+ +L C++K + ++VL M G + +
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNK--------KQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL------YQAARVGEGDE 366
FN L+ C A KL +M + G P + +LI S+ + ++
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEK 434
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
M + G + K + F LC + E+A SV +M G PD+ TY ++ C
Sbjct: 435 AYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLC 494
Query: 427 AHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
++++ A LF+E R G+ Y + K +++ +K
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 130/348 (37%), Gaps = 50/348 (14%)
Query: 146 DFKAIHDFLVDNKEVLGPKTL------------ASCIDRLVRAGRPTQVLGFFERMERDY 193
D +AI D + +V G K+ + I+ L RP+ V+ FF R
Sbjct: 100 DARAIADAVSGGDDVFGSKSQKFLRQFREKLSESLVIEVLRLIERPSAVISFFVWAGRQI 159
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKL---VKDTANEIFPDDKICDLLIKGWCVDGKLD 250
G+K +V+ + + E+L ++D E+F + ++L++ +C G
Sbjct: 160 GYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGE--FLNVLVRKYCRSGSFS 217
Query: 251 EAKRLAREMYRGGFELGTVAYNCIL------DCV--SKLCRKK--------DPFRLDSEA 294
A + F YNC++ DC+ + L ++ D F L A
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYA 277
Query: 295 ----------EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
E + L N VP V + LIS LC+ E+A+ RM C PN
Sbjct: 278 YSLCKVGKWREALTLMETENFVPDTV-FYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
T+ L+ ++G +++ M G K + + C A + +
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 405 KMKTDGHNPDSETYDLLMTKWCAH------NRVDKANALFDEAVRNGV 446
KM GH P Y++L+ C + ++ A + E + GV
Sbjct: 397 KMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGV 444
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID R G+ L ERM G + + R++++ C+NG A L+++
Sbjct: 782 TYTAMIDGFGRIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 840
Query: 225 TANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+P +I+G+ + + E+ L E+ + Y ++D + K R
Sbjct: 841 MKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQR 898
Query: 284 KKDPFRLDSEA---EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ RL E L+D T+N LI +LC + + A +LF M + G
Sbjct: 899 LEMALRLLEEVATFSATLVDYS--------STYNSLIESLCLANKVDKAFRLFSEMSKKG 950
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMID 369
P TF LIK L++ +++ E ++D
Sbjct: 951 VIPEMQTFCSLIKGLFRNSKISEALLLLD 979
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 24/296 (8%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA---- 218
PK L ++ + RP L FF ER GFKR + S ++++ L NG A
Sbjct: 47 PKLLVRVLNTV--RNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVM 104
Query: 219 EKLVKD----------TANEI-FPDDK-ICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
EK+V +++E+ P K I DLL+ + L++ + +M G L
Sbjct: 105 EKVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGL-L 163
Query: 267 GTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
V NC + V +L R +D +D A +V M G+ V T+N ++ + CK
Sbjct: 164 PDVK-NC--NRVLRLLRDRDN-NIDV-AREVYNVMVECGICPTVVTYNTMLDSFCKKGMV 218
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
++A++L ++M GC PN+ T+ VL+ L + + + E+I M G + Y
Sbjct: 219 QEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPL 278
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
+ C +IE+A + E+M + G P TY+ +M C RV A L D V
Sbjct: 279 IRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMV 334
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 8/244 (3%)
Query: 205 VVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G A +L+ + A P+D ++L+ G G++++AK L ++M R G
Sbjct: 208 MLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLG 267
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
E+ Y+ + + C K EA ++ +M G V T+N ++ LCK
Sbjct: 268 LEVSVYTYDPL---IRGYCEKGQI----EEASRLGEEMLSRGAVPTVVTYNTIMYGLCKW 320
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R DA KL M P+ ++ LI + +GE + ++ A Y
Sbjct: 321 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTY 380
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC + ++ AM + ++M G +PD T+ + +C + A LFDE +
Sbjct: 381 NTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLN 440
Query: 444 NGVE 447
G++
Sbjct: 441 RGLQ 444
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 9/299 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID L R G + + M + +G D + V C+ G A++L +
Sbjct: 379 TYNTLIDGLCRLGDLDVAMRLKDEMIK-HGPDPDVFTFTTFVRGFCKMGNLPMAKELFDE 437
Query: 225 TANEIFPDDKICDLL-IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N D+ + I G G +A + EM GF + YN +D + KL
Sbjct: 438 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 497
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
K EA +++ M YNG+ + T+ +I A LF M G P
Sbjct: 498 LK-------EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP 550
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ VLI S R+ M G Y + LC + +++QA + F
Sbjct: 551 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFF 610
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+M+ G +P+ TY +L+ + C +A L+ + + ++ +R ++L K
Sbjct: 611 AEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 8/243 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ LC+ G S A KL+ N+ + PD + LI G+ G + EA L E+
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
V YN ++D + +L RL E K +G +V TF + CK+
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIK-------HGPDPDVFTFTTFVRGFCKM 425
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
A +LF M G P+ ++ I + + M + M + G+ Y
Sbjct: 426 GNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITY 485
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
F+ L + +++A + +KM +G PD TY ++ + KA ALF E +
Sbjct: 486 NVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLS 545
Query: 444 NGV 446
G+
Sbjct: 546 KGI 548
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV------L 316
GF+ ++Y+ ILD +++ + + EKV+ NGV V + V L
Sbjct: 76 GFKRSEISYSVILDILARNGLMRSAY---CVMEKVVSVKMENGVIDVVSSSEVSMPSVKL 132
Query: 317 ISNL---CKIRRS--EDAIKLFYRMGEWGCHP---NETTFLVLIKSLYQAARVGEGDEMI 368
I +L +++S E + +FY+M G P N L L++ + + E+
Sbjct: 133 ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRD--RDNNIDVAREVY 190
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+ M G Y L C +++A+ + +M+ G +P+ TY++L+
Sbjct: 191 NVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHS 250
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRVDP 457
+++A L + +R G+EV Y DP
Sbjct: 251 GEMEQAKELIQDMLRLGLEVSVYTY--DP 277
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 20/288 (6%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKD-SLRLVVEKLCENGYASYAEKLVKDTANE 228
I+ L +A + + F + M R + S ++ LC+ A + +E
Sbjct: 91 INELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSE 150
Query: 229 --IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----AYNCILDCVSKLC 282
+ PD +LI G+C K+DE R A ++Y+ +L V YN L+ + +
Sbjct: 151 RSVVPDVVSYSILIDGFC---KIDELGR-AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKG 206
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R D A+ V +M G +V T++ LI R+ + A +LF M GC
Sbjct: 207 RIAD-------AQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCR 259
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN T+ L+ L + ++ E E+ +M G K Y L C + +IEQA+ V
Sbjct: 260 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEV 319
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
F++M + GH+PD Y+ L+ + + +A LF V E KP
Sbjct: 320 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR--ECKP 365
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 138/325 (42%), Gaps = 44/325 (13%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ++ L +A + Q F M + D S ++++ C+ AEKL K +
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
P+ + + G G++ +A+ + EM G + Y+ ++ S L RK D
Sbjct: 186 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFS-LARKHD 244
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
+A ++ M G N T+N L+ LCK + ++A +LF +M E GC P++
Sbjct: 245 ------QAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKV 298
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGY--------------------AIGKKDYYEF 386
T+ L+ ++ + E+ D M S G+ ++ +
Sbjct: 299 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVM 358
Query: 387 LTRLC------------GI---ERIEQAMSVFEKMKTD-GHNPDSETYDLLMTKWCAHNR 430
++R C G+ +R++ A+ VFE+M+ D G +PD TY+ L+ C R
Sbjct: 359 VSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 418
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
+ +A +F E R + P + V
Sbjct: 419 LSEAMKVFKEIDRLKLSPDPHAFNV 443
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 26/279 (9%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
++D V T + ++ L+R GR G +E M G D + ++ +G
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM-ISAGCSPDVITYSTLI-----HG 236
Query: 214 YASYAEKLVKDTANEIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ S A K D A+E+F P+ + L+ G C + K DEA L R+M G
Sbjct: 237 F-SLARK--HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ V Y +L + + + +A +V +M G +V +N L+ +
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIE-------QAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 346
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM-KSAGYAIGKKDY 383
+ +A +LF M C P+ + ++I L +A R+ + E+ +RM + G + Y
Sbjct: 347 KPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTY 406
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ LCG +R+ +AM VF+++ +PD +++L+
Sbjct: 407 NSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 445
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 173 LVRAGRPTQVLGFFERM-ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF- 230
L + +P + F +M ER G DK + ++ C G A ++ + ++
Sbjct: 272 LCKESKPDEAHELFRKMVER--GCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 329
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + L+KG+ GK EA++L + M + TV++N ++D +SK RL
Sbjct: 330 PDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSK------AKRL 383
Query: 291 DSEAEKVLLDMEYN-GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
D +A +V ME + G ++ T+N LI LC +R +A+K+F + P+ F
Sbjct: 384 D-DAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFN 442
Query: 350 VLIKSLYQAAR 360
VL++++Y A
Sbjct: 443 VLLEAMYAAGH 453
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 19/149 (12%)
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE----------WGCHPNETTFLVLIKSL 355
P N + + LCK + E A + M E CH +I+ L
Sbjct: 7 APLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHS-------VIQEL 59
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDS 415
+A RV +++ M GY + + LC ++I++A + M S
Sbjct: 60 CKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRAS 119
Query: 416 E--TYDLLMTKWCAHNRVDKANALFDEAV 442
+Y+ L+ C +V +A A+F V
Sbjct: 120 SCFSYNSLLNSLCKAKKVHQAFAIFSTMV 148
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 9/262 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID + GR + FFE M + + D + ++ C+ G + ++
Sbjct: 170 TYNSMIDGYGKVGRLDDTVYFFEEM-KSMSCEPDVITYNTLINCFCKFGKLPKGLEFFRE 228
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ L+ +C + + +A + +M R G Y ++D K+
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGN 288
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D FRL E +V GV NV T+ LI LC + R ++A +LF +M G P
Sbjct: 289 LSDAFRLADEMSQV-------GVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIP 341
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N ++ LI +A + E++D MK G Y F+ LCG+E+IE A V
Sbjct: 342 NLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVM 401
Query: 404 EKMKTDGHNPDSETYDLLMTKW 425
+M+ G ++ Y LM +
Sbjct: 402 NEMQEKGIKANTFIYTTLMDAY 423
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 7/219 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+FP + C+ L+ + GK D KR ++M G + YN ++DC +C++ D
Sbjct: 94 VFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDC---MCKEGDI- 149
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
A + +M++ G+ + T+N +I K+ R +D + F M C P+ T+
Sbjct: 150 ---EAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITY 206
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + ++ +G E MK +G Y + C + ++QA+ + M+
Sbjct: 207 NTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRR 266
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
G P+ TY L+ +C + A L DE + GVE
Sbjct: 267 LGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVE 305
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 131/354 (37%), Gaps = 69/354 (19%)
Query: 159 EVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+V+ TL +C + G+ + L FF M++ G K + S +V+ C+ A
Sbjct: 202 DVITYNTLINC---FCKFGKLPKGLEFFREMKQS-GLKPNVVSYSTLVDAFCKEDMMQQA 257
Query: 219 EKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
K D + P++ L+ +C G L +A RLA EM + G E V Y ++D
Sbjct: 258 LKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDG 317
Query: 278 VSKLCRKKDPFRLDSE----------------------------AEKVLLDMEYNGVPRN 309
+ + R K+ L + A ++L +M+ G+ +
Sbjct: 318 LCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPD 377
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN------------------------- 344
+ + I +LC + + E A + M E G N
Sbjct: 378 LLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLE 437
Query: 345 ----------ETTFLVLIKSLYQAARVGEGDEMIDRMKSA-GYAIGKKDYYEFLTRLCGI 393
TF VLI L + V + + R+ + G Y + LC
Sbjct: 438 EMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKE 497
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+++E A ++FE+M G PD Y L+ V +A AL D+ GVE
Sbjct: 498 DQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVE 551
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 237 DLLIKG---WCVDG--KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
DLL+ G W + G K++ AK + EM G + T Y ++D K ++P
Sbjct: 377 DLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFK---SENP---- 429
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG-EWGCHPNETTFLV 350
SE +L +M + TF VLI LCK + AI F R+ ++G N +
Sbjct: 430 SEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTA 489
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
+I L + +V + ++M G + Y + + QA+++ +KM G
Sbjct: 490 MIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIG 549
Query: 411 HNPDSETYDL 420
+ DL
Sbjct: 550 VESGARFGDL 559
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 11/282 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL-VKDTANE 228
+ RL ++G V FF M G + ++++ LC+ G + +L V+
Sbjct: 202 LHRLSKSGNGQLVRKFFNDM-IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 260
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD + LI G+ G L+E L EM G + YN +++C K + F
Sbjct: 261 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 320
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
SE M+ NG+ NV T++ LI CK + AIKL M G PNE T+
Sbjct: 321 EYFSE-------MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTY 373
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI + +A + E ++++ M AG + Y L LC R+ +A VF M
Sbjct: 374 TSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 433
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
DG +P+ + Y L+ + R++ A + + +KP
Sbjct: 434 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE--CNIKP 473
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 118/290 (40%), Gaps = 9/290 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID +AG T+ M + G K + + +++ LC+ G AE++ +
Sbjct: 372 TYTSLIDANCKAGNLTEAWKLLNDMLQA-GVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 430
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ I P+ ++ L+ G+ ++++A ++ ++M + + Y I + C
Sbjct: 431 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI---IWGHCS 487
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ E + +L +M+ G+ N +I K +S DA+ F M + G
Sbjct: 488 QRKL----EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 543
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ VLI L +A V + RM S G Y + LC IE A +F
Sbjct: 544 TIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLF 603
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
++M+ G PD + L+ H + +A L +E Y
Sbjct: 604 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 653
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 132/327 (40%), Gaps = 12/327 (3%)
Query: 133 TLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPK--TLASCIDRLVRAGRPTQVLGFFERM 189
T + DY + D + V +E+ L P T S ID + G +V F M
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGK 248
+D G D + ++ C+ A E + N + P+ LI +C +G
Sbjct: 292 -KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 350
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
+ A +L +M R G Y ++D C+ + +EA K+L DM GV
Sbjct: 351 MQGAIKLLXDMRRTGLLPNEFTYTSLIDAN---CKAGNL----TEAWKLLNDMLQAGVKL 403
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
N+ T+ L+ LCK R +A ++F M + G PN+ + L+ +A R+ + +++
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M Y + C ++E+ + E+MK+ G + + ++ +
Sbjct: 464 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 523
Query: 429 NRVDKANALFDEAVRNGVEVKPKEYRV 455
+ A F E GVE Y V
Sbjct: 524 GKSSDALNFFQEMQDVGVEATIVTYCV 550
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 132/355 (37%), Gaps = 50/355 (14%)
Query: 115 LGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLV 174
L F W F HT E+ R + + HD + KEV+ ++ +
Sbjct: 88 LKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTV---KEVI--------MNSRM 136
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-------YASYAEKLVKDTAN 227
G P V F+ + +C +G ++ + E + + AN
Sbjct: 137 DMGFP--VCNIFDMLWS--------------TRNICVSGSGVFDVLFSVFVELGLLEEAN 180
Query: 228 EIF---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
E F P + C+ L+ G ++ +M G YN ++D
Sbjct: 181 ECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMID-- 238
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
LC++ D + ++ + M G+ +V T+N LI K+ E+ LF M +
Sbjct: 239 -YLCKEGDL----ENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 293
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
GC P+ T+ LI + ++ E MK+ G Y + C ++
Sbjct: 294 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 353
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
A+ + M+ G P+ TY L+ C + +A L ++ ++ GV++ Y
Sbjct: 354 AIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 408
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 9/216 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA-EKL 221
P + ID +AG+ + L FF+ M+ D G + + ++++ LCE G A +
Sbjct: 510 PVISTTIIDAYFKAGKSSDALNFFQEMQ-DVGVEATIVTYCVLIDGLCEAGIVELAVDYF 568
Query: 222 VKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ + + P+ + LI G C + ++ AK+L EM G A+ ++D K
Sbjct: 569 CRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 628
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
++ L S ++ ++ + + + L+S + A K F M E G
Sbjct: 629 GNLQEALVLISRMTELAIEFD-------LHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 681
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
P E + L++ Y+ ++ E E+ + M+ Y+
Sbjct: 682 LPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYS 717
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 112/312 (35%), Gaps = 30/312 (9%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
L T + +D L +AGR + F M +D G ++ +V + A K
Sbjct: 403 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKD-GISPNQQVYTALVHGYIKAERMEDAMK 461
Query: 221 LVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++K T I PD + +I G C KL+E K + EM G V I+D
Sbjct: 462 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 521
Query: 280 KLCRKKDPFRLDSEAEKV-----------LLD-----------------MEYNGVPRNVE 311
K + D E + V L+D M G+ NV
Sbjct: 522 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVA 581
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+ LI LC E A KLF M G P+ T F LI + + E +I RM
Sbjct: 582 VYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 641
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
Y ++ + QA F +M G P+ L+ ++ ++
Sbjct: 642 TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQL 701
Query: 432 DKANALFDEAVR 443
D+A L +E R
Sbjct: 702 DEAIELKNEMER 713
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 123/316 (38%), Gaps = 44/316 (13%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
A+ + L AGR T+ GF+ + +++ C G +A K+ +
Sbjct: 181 ATMVHGLCEAGR-TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N P+ + LI G C GK++ A L M G E V Y ++ +
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
FRL L ME NG+ N TF+VLI LCK + E+A + + G NE
Sbjct: 300 CAFRL-------LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNE 352
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM----- 400
+ LI L + ++ DE++ +M S G+ Y + LC +++ QA
Sbjct: 353 VVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLED 412
Query: 401 ------------------------------SVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+F+KM G NPD TY + + +C R
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 431 VDKANALFDEAVRNGV 446
++ A ++ + V GV
Sbjct: 473 MEDAESMIVQMVDRGV 488
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
A+ PD + ++ G C G+ +EA+ L E GFE V YN ++D C
Sbjct: 170 ADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID---GYCNAG 226
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG----- 340
+ A KV M+ N NV T+ LI LCK + E A+ LF RM E G
Sbjct: 227 EM----EHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNV 282
Query: 341 ----------CH--------------------PNETTFLVLIKSLYQAARVGEGDEMIDR 370
C+ PN+ TF VLI +L + +V E +
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+ G + + Y + LC +I+ A + +KM ++G PD+ +Y L+ C +
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+ +A + ++ + G++ P Y + L + + + KK
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 133/300 (44%), Gaps = 9/300 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I L ++G+ + + F RM + G + + + +++ C G+ A +L+
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRM-VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306
Query: 224 DT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
N + P+D +LI C K++EA+ + + G ++ V Y ++D LC
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID---GLC 363
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ ++D+ A++++ M G + +++ LI LC+ ++ A + M E G
Sbjct: 364 KTG---KIDA-ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
+ T+ ++I L + ++ D+M + G Y F+ C R+E A S+
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+M G P+ TY+ L+ + V +A + F+ V G + Y V R + K
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 7/209 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI +C+ G + AK+ + G + AY V CR + + A +V
Sbjct: 78 LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF---VLGYCRAG----MLTHACRVF 130
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ M G R T+ L+ L +A+ +F M C P+ + ++ L +A
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R E + +++ S G+ Y + C +E A+ VFE M + +P+ TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ C +V++A LF V G+E
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLE 279
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 104/297 (35%), Gaps = 69/297 (23%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F+ +H + N V T + ID L + + + F + + G K ++ ++
Sbjct: 302 FRLLH-LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKK-GVKVNEVVYTSLI 359
Query: 207 EKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LC+ G A++L++ +E F PD LI G C KL +A + +M G +
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRL----------------------------DSEAEKV 297
V Y I+D + + + P ++ +AE +
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK---- 353
++ M GV N+ T+N LI + A F M G PNE ++ VL++
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Query: 354 ----------------------------------SLYQAARVGEGDEMIDRMKSAGY 376
L Q V E ++ MK GY
Sbjct: 540 KSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGY 596
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 21/251 (8%)
Query: 185 FFERMERDYG-----FKRDKDSLRLVVEKLCENGYASYA-EKLVKDTANEIFPDDKICDL 238
FFE+ R + K D S ++++ CE GY E L + + P+ +
Sbjct: 132 FFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 191
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVA----YNCILDCVSKLCRKKDPFRLDSEA 294
LI G C +G ++ K+L Y+ G EL VA Y +++ K+ KKD L +
Sbjct: 192 LIDGCCKNGDIERGKQL---FYKMG-ELDVVANQYTYTVLINGFFKMGLKKDGIELYEK- 246
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
M+ G+ NV T+N +I C + +A +LF M E G N T+ LI
Sbjct: 247 ------MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGG 300
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L Q RV E + ++ RMK G + Y + C I +++A S+F +MK+ G +P
Sbjct: 301 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPS 360
Query: 415 SETYDLLMTKW 425
TY++L+ +
Sbjct: 361 LATYNILIAGF 371
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 8/288 (2%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ I+ VR+ P Q L F+ G ++ ++ L ++ + A ++ +T
Sbjct: 87 AIINAHVRSQLPEQAL-FYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKG 145
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ D ++IKG C G LD+ + +M G V Y ++D C+ D
Sbjct: 146 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID---GCCKNGDI 202
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
R +++ M V N T+ VLI+ K+ +D I+L+ +M G PN T
Sbjct: 203 ER----GKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYT 258
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +I ++ E+ D M+ G A Y + LC R+ +A + +MK
Sbjct: 259 YNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK 318
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
DG +P+ +Y+ L+ +C+ +DKA++LF++ +G Y +
Sbjct: 319 RDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 366
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I P+ + +I C DGKL+ A L EM G V YN + + LC+++
Sbjct: 252 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTL---IGGLCQERRVL 308
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EAE+++ M+ +G+ N+ ++N LI C I + A LF +M G P+ T+
Sbjct: 309 ----EAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATY 364
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI +A +M+ M++ G + K Y + L + IE+A ++ M+
Sbjct: 365 NILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEK 424
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
G D Y +L+ C + +A+ LF
Sbjct: 425 AGLVADIYIYGVLIHGLCVVGDMKEASKLF 454
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 96/210 (45%), Gaps = 7/210 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+ LI G C + ++ EA+RL M R G ++YN ++D + LD +A
Sbjct: 295 NTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGN------LD-KASS 347
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
+ M+ +G ++ T+N+LI+ + + S + M G P++ T+ +L+ +L
Sbjct: 348 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 407
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
++ + + ++ M+ AG Y + LC + +++A +F+ + P+
Sbjct: 408 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 467
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
Y+ ++ +C +A L E NG+
Sbjct: 468 IYNTMIYGYCKEGSSYRALRLLKEMGENGM 497
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 121/324 (37%), Gaps = 32/324 (9%)
Query: 127 FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFF 186
+++T FF G +KD +++ + V T S I R G+ F
Sbjct: 222 YTYTVLINGFFK--MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 279
Query: 187 ERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCV 245
+ M R+ G + + ++ LC+ AE+L+ + + + P+ + LI G+C
Sbjct: 280 DEM-RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCS 338
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK--------- 296
G LD+A L +M G YN ++ S+ + E E
Sbjct: 339 IGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVT 398
Query: 297 --VLLD-----------------MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+L+D ME G+ ++ + VLI LC + ++A KLF +
Sbjct: 399 YTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLD 458
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
E PN+ + +I + ++ M G Y + LC E+
Sbjct: 459 EMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWT 518
Query: 398 QAMSVFEKMKTDGHNPDSETYDLL 421
+A + + M G P ++++
Sbjct: 519 EAEVLLKDMIELGLKPSISIWNMI 542
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ D I +LI G CV G + EA +L + + + V YN + + C++ +
Sbjct: 427 LVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM---IYGYCKEGSSY 483
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
R A ++L +M NG+ NV ++N I LCK + +A L M E G P+ + +
Sbjct: 484 R----ALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIW 539
Query: 349 LVLIKS 354
++ K+
Sbjct: 540 NMISKA 545
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 15/287 (5%)
Query: 159 EVLGPKTLASCID--RLVRAG----RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
E++ + L S +D RL+ A R V+ F ++ME YG D S +++ C
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL-YGISHDLYSFTILIHCFCRC 119
Query: 213 GYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
S+A ++ + P L+ G+C+ ++ +A L M + G+E V Y
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N ++D LC+ + + A ++L +ME G+ +V T+N L++ LC R DA +
Sbjct: 180 NTLID---GLCKNGEL----NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+ M + +P+ TF LI + + E E+ M + Y + LC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
R+ A F+ M + G P+ TY+ L++ +C VD+ LF
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 148/342 (43%), Gaps = 27/342 (7%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD+ + G P + + I+ L + L F ME+ G + D + ++ L
Sbjct: 696 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISGL 754
Query: 210 CENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
+G + A +L++D +I P+ LI + +G L EA+ L +EM R
Sbjct: 755 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 814
Query: 269 VAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
YN +++ C+ C + D K G +V T+N LI+ CK +R
Sbjct: 815 FTYNSLINGFCIHG-CLGDAKYMFDLMVSK--------GCFPDVVTYNTLITGFCKSKRV 865
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
ED +KLF M G + T+ LI QA ++ ++ +RM G + Y
Sbjct: 866 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 925
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L LC +IE+A+ + E ++ + D TY++++ C +++ +A LF R GV
Sbjct: 926 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 985
Query: 447 EVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQ 488
+ Y I + G R+ L + + RR+K+
Sbjct: 986 KPDAIAY----------ITMISGLCRKGLQREADKLCRRMKE 1017
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 154/389 (39%), Gaps = 50/389 (12%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDR 172
+I+ F LT AN + + YF ++ + I + ++ L C R
Sbjct: 70 SIVDFTRLLTATANLRRYETVI-----YFSQKMELYGI------SHDLYSFTILIHCFCR 118
Query: 173 LVRAGRPTQVLGFFERMERD----------YGF---KRDKDSLRLVV------------- 206
R VLG ++ + +GF R D+ LV+
Sbjct: 119 CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 207 -----EKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
+ LC+NG + A +L+ + + D + + L+ G C G+ +A R+ R+M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ V + ++D K LD EA+++ +M + V N T+N +I+ L
Sbjct: 239 KRSINPDVVTFTALIDVFVK------QGNLD-EAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C R DA K F M GC PN T+ LI + V EG ++ RM G+
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C + ++ A+ +F M + PD T+ +L+ C + ++ A FD+
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
+ + Y + L K V+K
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 123/287 (42%), Gaps = 9/287 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G L ME+ G D + ++ LC +G S A ++++D
Sbjct: 183 IDGLCKNGELNIALELLNEMEKK-GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI + G LDEA+ L +EM + + V YN I ++ LC +
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI---INGLCMHGRLY 298
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A+K M G NV T+N LIS CK R ++ +KLF RM G + + T+
Sbjct: 299 ----DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI Q ++ ++ M S + L LC IE A+ F+ M+
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
Y++++ C ++V+KA LF GV+ + Y +
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ G+C + EA L M GF V YN + ++ LC+ +D + A +V
Sbjct: 680 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTV---INGLCKNRDL----NNALEVF 732
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME G+ + T+N LIS L R DA +L M + PN F LI + +
Sbjct: 733 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 792
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E + M Y + C + A +F+ M + G PD TY
Sbjct: 793 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 852
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ L+T +C RV+ LF E G+
Sbjct: 853 NTLITGFCKSKRVEDGMKLFCEMTYQGL 880
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 38/242 (15%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
IH L D K + C +V T + GF + KR +D ++L
Sbjct: 825 CIHGCLGDAKYMFDLMVSKGCFPDVVTYN--TLITGFCKS-------KRVEDGMKL---- 871
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
CE Y + LV D + LI G+C GKL+ A+++ M G
Sbjct: 872 FCEMTY----QGLVGDAFTY--------NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 919
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLL---DMEYNGVPRNVETFNVLISNLCKIRR 325
V YN +LDC LC + + EK L+ D++ + + ++ T+N++I LC+ +
Sbjct: 920 VTYNILLDC---LCN-------NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
++A LF + G P+ ++ +I L + E D++ RMK G+ ++ Y E
Sbjct: 970 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 1029
Query: 386 FL 387
L
Sbjct: 1030 TL 1031
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C+ G L +AK + M G V YN + ++ C+ K R++ + K+
Sbjct: 820 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL---ITGFCKSK---RVE-DGMKLF 872
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M Y G+ + T+N LI C+ + A K+F RM + G P+ T+ +L+ L
Sbjct: 873 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 932
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE-------------- 404
++ + M++ ++ + + Y + LC +++++A +F
Sbjct: 933 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 992
Query: 405 ---------------------KMKTDGHNPDSETYD 419
+MK DG P YD
Sbjct: 993 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ ++ +F +LI C+ R A+ L +M + G P+ T L+ Q R
Sbjct: 630 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 689
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E ++D M G+ Y + LC + A+ VF M+ G D+ TY+
Sbjct: 690 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 749
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L++ R A L + V+ ++
Sbjct: 750 LISGLSNSGRWTDAARLLRDMVKRKID 776
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A + +M ++ ++ F L++ +RR E I +M +G + +F +LI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ +R+ ++ +M GY + L C + RI A S+ M G+
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ Y+ L+ C + ++ A L +E + G+ Y
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 87/208 (41%), Gaps = 9/208 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G D K + D +V T + I ++ R + F M G D +
Sbjct: 828 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFT 886
Query: 202 LRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ C+ G + A+K+ + + PD ++L+ C +GK+++A + ++
Sbjct: 887 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 946
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ ++ + YN I + LCR D + EA + + GV + + +IS L
Sbjct: 947 KSEMDVDIITYNII---IQGLCRT-DKLK---EAWCLFRSLTRKGVKPDAIAYITMISGL 999
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTF 348
C+ +A KL RM E G P+E +
Sbjct: 1000 CRKGLQREADKLCRRMKEDGFMPSERIY 1027
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 23/311 (7%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
F R A +L N L P I R P L FFE +
Sbjct: 57 FFRSHSLNACFGYLSRN---LNPSIAFEVIKRF---SDPLLGLKFFEFSRTHLSINHTFN 110
Query: 201 SLRLVVEKLCENGYASYAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ L++ LC+ G A K+V D ++ I PD I +LL+ + GKLD AK E
Sbjct: 111 TYDLLMRNLCKVGLNDSA-KIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL---DMEYNGVPRNVETFNV 315
++ G ++ YN +L+ + K + E VLL +E VP +V +FN+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVK---------QNLVDEAVLLFREHLEPYFVP-DVYSFNI 219
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI-DRMKSA 374
LI LC+I + A + F MG +GC P+ ++ LI + + +G +++ + M
Sbjct: 220 LIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G + Y ++ C + ++ A +F++M + G P+ T+++L+ + + A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339
Query: 435 NALFDEAVRNG 445
++++ + G
Sbjct: 340 MVMYEKMLLLG 350
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 10/282 (3%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
+ P + ++ LV+ + + F Y F D S +++ LC G A +
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY-FVPDVYSFNILIRGLCRIGEIDKAFE 235
Query: 221 LVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLARE-MYRGGFELGTVAYNCILDCV 278
++ N FPD + LI G+C ++ + L +E M G + Y I +
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI---I 292
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
S C+ D A ++ +M +G+ N TFNVLI K+ A+ ++ +M
Sbjct: 293 SGYCKLGDM----KAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
GC P+ TF LI + V +G ++ + MK + Y + LC RI +
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
A + +K+ P Y+ ++ +C +VD+AN + E
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAE 450
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++LI+G C G++D+A + M G V+YN + ++ CR +
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL---INGFCRVNEI--- 265
Query: 291 DSEAEKVLL-DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
S+ +L DM GV +V T+ +IS CK+ + A +LF M G PN+ TF
Sbjct: 266 -SKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFN 324
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
VLI + + M ++M G + + C + Q + ++E+MK
Sbjct: 325 VLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVR 384
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
+P+ TY +L+ C NR+ +A EV PK + +P
Sbjct: 385 NLSPNVYTYAVLINALCKENRIREARNFLRHL--KSSEVVPKPFIYNP 430
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 12/289 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TAN 227
I L R G + FF+ M ++G D S ++ C S L+K+
Sbjct: 221 IRGLCRIGEIDKAFEFFQNMG-NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ PD +I G+C G + A L EM G + +N ++D K+ +
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ EK+LL G +V TF LI C+ +KL+ M PN T
Sbjct: 340 MVM---YEKMLLL----GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ VLI +L + R+ E + +KS+ Y + C ++++A + +M+
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
PD T+ +L+ C R+ +A + F + + + P E ++
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE--INCVPDEITIN 499
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 92/243 (37%), Gaps = 49/243 (20%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLG----PKTLASCIDRLVRAGRPTQVLGF 185
D T + D FG+ + ++ + + +LG T S ID R G Q L
Sbjct: 319 NDFTFNVLIDGFGKVGNMRSAM-VMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKL 377
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWC 244
+E M + + + +++ LC+ A ++ ++E+ P I + +I G+C
Sbjct: 378 WEEM-KVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFC 436
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
GK+DEA + EM K CR
Sbjct: 437 KAGKVDEANFIVAEMQE------------------KKCR--------------------- 457
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
P + TF +LI C R +AI FY+M E C P+E T LI L +A E
Sbjct: 458 --PDKI-TFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEA 514
Query: 365 DEM 367
++
Sbjct: 515 SQI 517
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 384 YEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y+ L R LC + + A VF+ M++DG PDS +LL++ + ++D A +E
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH 171
Query: 443 RNGVEVKPKEY 453
G++V P Y
Sbjct: 172 CYGIKVSPFVY 182
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 23/311 (7%)
Query: 141 FGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD 200
F R A +L N L P I R P L FFE +
Sbjct: 57 FFRSHSLNACFGYLSRN---LNPSIAFEVIKRF---SDPLLGLKFFEFSRTHLSINHTFN 110
Query: 201 SLRLVVEKLCENGYASYAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ L++ LC+ G A K+V D ++ I PD I +LL+ + GKLD AK E
Sbjct: 111 TYDLLMRNLCKVGLNDSA-KIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL---DMEYNGVPRNVETFNV 315
++ G ++ YN +L+ + K + E VLL +E VP +V +FN+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVK---------QNLVDEAVLLFREHLEPYFVP-DVYSFNI 219
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI-DRMKSA 374
LI LC+I + A + F MG +GC P+ ++ LI + + +G +++ + M
Sbjct: 220 LIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279
Query: 375 GYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
G + Y ++ C + ++ A +F++M + G P+ T+++L+ + + A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339
Query: 435 NALFDEAVRNG 445
++++ + G
Sbjct: 340 MVMYEKMLLLG 350
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 10/282 (3%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
+ P + ++ LV+ + + F Y F D S +++ LC G A +
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY-FVPDVYSFNILIRGLCRIGEIDKAFE 235
Query: 221 LVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLARE-MYRGGFELGTVAYNCILDCV 278
++ N FPD + LI G+C ++ + L +E M G + Y I +
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI---I 292
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
S C+ D A ++ +M +G+ N TFNVLI K+ A+ ++ +M
Sbjct: 293 SGYCKLGDM----KAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
GC P+ TF LI + V +G ++ + MK + Y + LC RI +
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
A + +K+ P Y+ ++ +C +VD+AN + E
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAE 450
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD ++LI+G C G++D+A + M G V+YN + ++ CR +
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL---INGFCRVNEI--- 265
Query: 291 DSEAEKVLL-DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
S+ +L DM GV +V T+ +IS CK+ + A +LF M G PN+ TF
Sbjct: 266 -SKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFN 324
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
VLI + + M ++M G + + C + Q + ++E+MK
Sbjct: 325 VLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVR 384
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDP 457
+P+ TY +L+ C NR+ +A EV PK + +P
Sbjct: 385 NLSPNVYTYAVLINALCKENRIREARNFLRHL--KSSEVVPKPFIYNP 430
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 12/289 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD--TAN 227
I L R G + FF+ M ++G D S ++ C S L+K+
Sbjct: 221 IRGLCRIGEIDKAFEFFQNMG-NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ PD +I G+C G + A L EM G + +N ++D K+ +
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
+ EK+LL G +V TF LI C+ +KL+ M PN T
Sbjct: 340 MVM---YEKMLLL----GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ VLI +L + R+ E + +KS+ Y + C ++++A + +M+
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
PD T+ +L+ C R+ +A + F + + + P E ++
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE--INCVPDEITIN 499
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 92/243 (37%), Gaps = 49/243 (20%)
Query: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLG----PKTLASCIDRLVRAGRPTQVLGF 185
D T + D FG+ + ++ + + +LG T S ID R G Q L
Sbjct: 319 NDFTFNVLIDGFGKVGNMRSAM-VMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKL 377
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWC 244
+E M + + + +++ LC+ A ++ ++E+ P I + +I G+C
Sbjct: 378 WEEM-KVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFC 436
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
GK+DEA + EM K CR
Sbjct: 437 KAGKVDEANFIVAEMQE------------------KKCR--------------------- 457
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
P + TF +LI C R +AI FY+M E C P+E T LI L +A E
Sbjct: 458 --PDKI-TFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEA 514
Query: 365 DEM 367
++
Sbjct: 515 SQI 517
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 384 YEFLTR-LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y+ L R LC + + A VF+ M++DG PDS +LL++ + ++D A +E
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH 171
Query: 443 RNGVEVKPKEY 453
G++V P Y
Sbjct: 172 CYGIKVSPFVY 182
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 8/244 (3%)
Query: 203 RLVVEKLCENG-YASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYR 261
+++E C G + S L A D C+L++ C G +DE L R++
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS 206
Query: 262 GGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLC 321
G E V+YN +L LC K R D + E+++++M G P NV TFN LI+ LC
Sbjct: 207 FGCEPDIVSYNAVL---KGLCMAK---RWD-DVEELMVEMVRVGCPPNVATFNTLIAYLC 259
Query: 322 KIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKK 381
+ E + +M E GC P+ + +I + + ++++ RM S G
Sbjct: 260 RNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVV 319
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y L LC ER E+A + +M + D T+++L+ +C + VD+ L ++
Sbjct: 320 CYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 379
Query: 442 VRNG 445
+ +G
Sbjct: 380 LEHG 383
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 10/294 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ PD +I G+C +G +DEA L
Sbjct: 352 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 411
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G + T++Y +L LCR + +A++++ M G N TFN L
Sbjct: 412 KNMSACGCKPNTISYTIVL---KGLCRAERWV----DAQELISHMIQQGCLPNPVTFNTL 464
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ +CK E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 465 INFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 524
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + L R ++ + +F+ ++ D+ Y+ +++ C D+A
Sbjct: 525 TPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAID 584
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIR 490
F V NG Y + R L V++ + + L E +R+ R +R
Sbjct: 585 FFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ--DLLSELCSRRAVRKHLVR 636
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 141/306 (46%), Gaps = 12/306 (3%)
Query: 145 KDFKAIHDFLVDNKEVLGPKTLAS---CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
K + + + +V+ V P +A+ I L R G QV +M ++G D
Sbjct: 227 KRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMP-EHGCTPDLRM 285
Query: 202 LRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
+++ +C++G+ A ++ + + +C + ++KG C + +EA+ L EM+
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ L V +N ++D C+ R+ E++L E+ +P +V T+ +I+
Sbjct: 346 QEDCPLDDVTFNILVD---FFCQNGLVDRVIELLEQML---EHGCIP-DVITYTTVINGF 398
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK ++A+ L M GC PN ++ +++K L +A R + E+I M G
Sbjct: 399 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 458
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+ + +C +EQA+ + ++M +G +PD +Y ++ + ++A L +
Sbjct: 459 VTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 518
Query: 441 AVRNGV 446
+ G+
Sbjct: 519 MINKGI 524
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 113/301 (37%), Gaps = 35/301 (11%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G D + LVV +CE G +L++ + PD + ++KG C+ + D+
Sbjct: 173 GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKK--------------------------- 285
+ L EM R G +N + ++ LCR
Sbjct: 233 EELMVEMVRVGCPPNVATFNTL---IAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATI 289
Query: 286 -DPFRLDSE---AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
D D A +L M G+ NV +N ++ LC R E+A L M + C
Sbjct: 290 IDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 349
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
++ TF +L+ Q V E++++M G Y + C +++A+
Sbjct: 350 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 409
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLK 461
+ + M G P++ +Y +++ C R A L ++ G P + ++
Sbjct: 410 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC 469
Query: 462 K 462
K
Sbjct: 470 K 470
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 7/200 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
+++ C G + +A + EM G + IL+ CR FR A +VL
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILE---AACRGGG-FRSAVRALQVL 169
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
G + N+++S +C+ ++ ++L ++ +GC P+ ++ ++K L A
Sbjct: 170 ---HAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMA 226
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R + +E++ M G + + LC EQ +M G PD Y
Sbjct: 227 KRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMY 286
Query: 419 DLLMTKWCAHNRVDKANALF 438
++ C + AN +
Sbjct: 287 ATIIDGICKDGHHEVANDIL 306
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 159/381 (41%), Gaps = 32/381 (8%)
Query: 135 SFFTDYF--GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192
S ++F GR++D I+ ++ L + +D + +AG + FE ++
Sbjct: 521 SLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQ 580
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDE 251
G D S +++ L + G++ KL + + + D + +++I G+C GK+++
Sbjct: 581 -GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNK 639
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK--------------- 296
A +L EM G + V Y ++D ++K+ R + + L EA+
Sbjct: 640 AYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLID 699
Query: 297 -------------VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+L ++ G+ N T+N L+ L K ++A+ F M C P
Sbjct: 700 GFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPP 759
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
NE T+ +++ L + + + M+ G Y ++ L + + +A +F
Sbjct: 760 NEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLF 819
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKP 463
E+ K+ G PDS Y+ ++ N+ A LF+E G + K V L K
Sbjct: 820 ERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKA 879
Query: 464 IAVKKGKKRETLPEKMARKRR 484
+++ + +MA+ +
Sbjct: 880 DCLEQAAIVGAVLREMAKSQH 900
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 129/315 (40%), Gaps = 29/315 (9%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
CID + G+ FF + + G D + ++ LC+ A +L ++ +N
Sbjct: 278 CIDCFGKVGKVDMAWKFFHEL-KSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSN 336
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ P + +I G+ GK +EA L R G +AYNCIL C+ + + ++
Sbjct: 337 KSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEA 396
Query: 288 FRL----------DSEAEKVLLDM-----------------EYNGVPRNVETFNVLISNL 320
R+ + + +L+DM + G+ N+ T N++I L
Sbjct: 397 LRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRL 456
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK +R ++A +F + C P+ TF LI L + +V + + ++M +G
Sbjct: 457 CKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNA 516
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + R E ++++M G +PD + M ++K ALF+E
Sbjct: 517 VVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEE 576
Query: 441 AVRNGVEVKPKEYRV 455
G+ + Y +
Sbjct: 577 IKAQGLTPDVRSYSI 591
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 141/314 (44%), Gaps = 46/314 (14%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID L +AG L + M ++ G + ++ +++++LC+ A++L D A I
Sbjct: 418 IDMLCKAGELEAALKVQDSM-KEAGLFPNIITVNIMIDRLCK------AQRL--DEACSI 468
Query: 230 FP--DDKICD-------LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
F D K+C LI G GK+++A L +M G V Y ++ K
Sbjct: 469 FLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFK 528
Query: 281 LCRKKDPFRL-------------------------DSEAEK---VLLDMEYNGVPRNVET 312
RK+D ++ E EK + +++ G+ +V +
Sbjct: 529 CGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRS 588
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+++LI L K S+D KLFY M E G H + + ++I ++ +V + ++++ MK
Sbjct: 589 YSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMK 648
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G Y + L I+R+++A +FE+ K+ + + Y L+ + R+D
Sbjct: 649 TKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRID 708
Query: 433 KANALFDEAVRNGV 446
+A + +E ++ G+
Sbjct: 709 EAYLILEELMQKGL 722
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 120/300 (40%), Gaps = 15/300 (5%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRL--VRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
A+ D L E+ P+ + I RL VR L +F +ER ++ ++
Sbjct: 85 ALEDALNTFDEMPQPELVVGVIRRLKDVRVA-----LHYFRWVERKTKQLHSPEAYNALL 139
Query: 207 EKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ Y E+++++ + F P + C ++ + KL EA + M + F
Sbjct: 140 MLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFR 199
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRR 325
AY ++ +S + DP +L M+ G V F LI + R
Sbjct: 200 PAYSAYTTLIGALSA-AHEADPML------TLLRQMQEIGYEVTVHLFTTLICVFAREGR 252
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
+ A+ L M + + + V I + +V + +KS G +
Sbjct: 253 VDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTS 312
Query: 386 FLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ LC ER+++A+ +FE++ ++ P Y+ ++ + + + ++A +L + R G
Sbjct: 313 MIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKG 372
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
E++L +M G + T ++++ K R+ +A + M ++ P + + LI +
Sbjct: 152 EQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGA 211
Query: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IEQAMSVFEKMKTDGH 411
L A ++ +M+ GY + + F T +C R ++ A+S+ ++MK++
Sbjct: 212 LSAAHEADPMLTLLRQMQEIGYEV---TVHLFTTLICVFAREGRVDAALSLLDEMKSNSF 268
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
N D Y++ + + +VD A F E G+
Sbjct: 269 NADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGL 303
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 58/145 (40%)
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
E +N L+ + + R E ++ M G P+ T + ++ S ++ ++ E +I+
Sbjct: 133 EAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIET 192
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M+ + Y + L + +++ +M+ G+ + L+ + R
Sbjct: 193 MRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGR 252
Query: 431 VDKANALFDEAVRNGVEVKPKEYRV 455
VD A +L DE N Y V
Sbjct: 253 VDAALSLLDEMKSNSFNADLVLYNV 277
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 9/261 (3%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
G T + I+ L +AG+ + +R+ D G + S +V++ LC+ A ++
Sbjct: 429 GFSTYLTLIEALYKAGKMEIGNRYMDRLIND-GLISNIYSYNMVIDCLCKGKSMDRASEM 487
Query: 222 VKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+D N I P+ + LI G+C +G +D+A+ L + F +N ++D + +
Sbjct: 488 FRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQ 547
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ ++ F +E +E++ VP NV T+N+LI + C I + L +M G
Sbjct: 548 AHKHENAFGCFTEM------VEWD-VPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHG 600
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ +F LI+ R + +++ D M G Y + LC R ++A
Sbjct: 601 IQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAR 660
Query: 401 SVFEKMKTDGHNPDSETYDLL 421
+F MK +G PDS T L
Sbjct: 661 EIFLSMKENGCTPDSYTCSLF 681
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 12/230 (5%)
Query: 217 YAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
Y ++L+ D + I+ + + D L KG +D A + R+++ G V YN +
Sbjct: 452 YMDRLINDGLISNIYSYNMVIDCLCKG----KSMDRASEMFRDLHNRGISPNIVTYNTL- 506
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ CR + +D E + + +E P ++ TFN LI LC+ + E+A F
Sbjct: 507 --IGGFCRNGN---MDKAQELLEMLLESRFRP-DIFTFNSLIDGLCQAHKHENAFGCFTE 560
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M EW PN T+ +LI S V ++ +MK G + + G R
Sbjct: 561 MVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNR 620
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++A +F+ M G PD+ TY L+ C R DKA +F NG
Sbjct: 621 FQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENG 670
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 66/129 (51%)
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
TFN+ ++ + K + +F + G P +T+L LI++LY+A ++ G+ +DR
Sbjct: 396 STFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDR 455
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+ + G Y + LC + +++A +F + G +P+ TY+ L+ +C +
Sbjct: 456 LINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGN 515
Query: 431 VDKANALFD 439
+DKA L +
Sbjct: 516 MDKAQELLE 524
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 68/144 (47%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G+ N+ ++N++I LCK + + A ++F + G PN T+ LI + + +
Sbjct: 459 DGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDK 518
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
E+++ + + + + + LC + E A F +M P+ TY++L+
Sbjct: 519 AQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILIC 578
Query: 424 KWCAHNRVDKANALFDEAVRNGVE 447
+CA V ++ L + +G++
Sbjct: 579 SFCAIGDVSRSTHLLRQMKLHGIQ 602
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+L W G + + ++ G T YN ++D + K LD K
Sbjct: 199 ILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIK------SNSLDLAYLKF 252
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+N VP T+N+LI +C++ ++A++L +M G PN T+ +LI +
Sbjct: 253 QQMSSHNCVPDRF-TYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFN 311
Query: 358 AARVGEGDEMIDRMK 372
A R GE +++ MK
Sbjct: 312 AKRAGETFKVLQTMK 326
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 95/254 (37%), Gaps = 33/254 (12%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
K + +++ PD ++LI G C G +DEA RL ++M G+ Y ++D
Sbjct: 251 KFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFF 310
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR---- 335
R + F KVL M+ V N T L+ + + + A +L
Sbjct: 311 NAKRAGETF-------KVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVER 363
Query: 336 ---MGEWGC-------------------HPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+ + C P+ +TF + + + + + + D
Sbjct: 364 KQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFNITLACVLKKLDLKVTCTVFDNCVQ 423
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
+G G Y + L ++E +++ DG + +Y++++ C +D+
Sbjct: 424 SGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDR 483
Query: 434 ANALFDEAVRNGVE 447
A+ +F + G+
Sbjct: 484 ASEMFRDLHNRGIS 497
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 9/300 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S I L + G +V + M D D + ++ + G+ A +L +
Sbjct: 200 TYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDE 259
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N ++P KI L+ + K+++A + +EM G L Y + + K R
Sbjct: 260 MKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGR 319
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D +R V LDM +G +V N LI+ L K+ R E +KLF +M W C P
Sbjct: 320 VDDAYR-------VFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKP 372
Query: 344 NETTFLVLIKSLYQA-ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
N T+ +IK+L++ A E ++MK G A Y + C RIE+A+ +
Sbjct: 373 NVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLL 432
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
E+M G P Y L+ R + AN LF E N + Y V ++ K
Sbjct: 433 LEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGK 492
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 10/290 (3%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL--CENGYASYAEKLVK 223
+ S I+ L + GR L F +ME + K + + V++ L C+ + A K
Sbjct: 342 INSLINILGKVGRLEVTLKLFRKME-SWQCKPNVVTYNTVIKALFECKAPASEAASWFEK 400
Query: 224 DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I P +LI G+C ++++A L EM GF AY +++ + K+ R
Sbjct: 401 MKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKR 460
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ A ++ L+++ N + + V+I + K R +A+ LF M + G P
Sbjct: 461 YE-------AANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKP 513
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + L+ + +A + E ++ M G + + L L ++A+ +F
Sbjct: 514 DVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMF 573
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
KMK+ PD+ +Y+ ++ ++A L E G E Y
Sbjct: 574 AKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITY 623
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 6/215 (2%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + + LI G+L+ +L R+M + V YN + + L K P
Sbjct: 337 PDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTV---IKALFECKAP--- 390
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
SEA M+ G+ + T+++LI CK R E A+ L M E G P +
Sbjct: 391 ASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCS 450
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI SL + R +E+ +K + Y + R+ +A+ +F +M+ G
Sbjct: 451 LINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLG 510
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
PD Y+ LM+ +D+A +L NG
Sbjct: 511 SKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENG 545
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 80/202 (39%), Gaps = 8/202 (3%)
Query: 95 PTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETL-SFFTDYFGRRKDFKAIHDF 153
P P+ S +N + R +L N H+ + + +FG+ D
Sbjct: 443 PCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVD- 501
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
L + E LG K + + +VRAG + M+ + G D +S +++ L
Sbjct: 502 LFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDEN-GCSPDLNSHNIILNGL 560
Query: 210 CENGYASYA-EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
G A E K ++ I PD + ++ G +EA +L REM GFE
Sbjct: 561 ARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNN 620
Query: 269 VAYNCILDCVSKLCRKKDPFRL 290
+ Y IL+ V K+ + P L
Sbjct: 621 ITYTSILEAVGKVDEDRAPAAL 642
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
++ L K + A+ +FY++ C P TT+ +I L Q + + E+ + M + G
Sbjct: 169 IVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDG 228
Query: 376 YAIGKKDYYEFLTRLCG-IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
Y L G + + A+ +F++MK +G P ++ Y L+ + ++V+KA
Sbjct: 229 NCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKA 288
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 9/282 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
LV +G L + RM G ++ + ++++ LC+ G A A K+ + + I P
Sbjct: 182 LVDSGVILLALALYNRMVAA-GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP 240
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ KI +L+ C GK+DEA +L M G V YN L + K+ R + F
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF--- 297
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ L+ ++ G ++ ++ LI L + RR ++ + M E P+ + ++
Sbjct: 298 ----QRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I+ +A R+ + +D MK G+ Y L LC +E+A ++ +M +
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
DS T +++ C VD+A +FDE +G + Y
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 42/251 (16%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P + + ++K G + A L M G YN ++D LC++ +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMD---GLCKQG----M 222
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A K+ +M G+ NV+ + VL+S+LC + ++A++L M + GC P+E T+
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY--------------------------- 383
+ L + RV E + + ++ G+A+G K Y
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342
Query: 384 -------YEFLTRLCG-IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + R C RIE A+S + MK G PD+ Y+ ++ C H +++A+
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402
Query: 436 ALFDEAVRNGV 446
L E ++N +
Sbjct: 403 TLRSEMLQNNL 413
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 34/295 (11%)
Query: 173 LVRAGRPTQVLGFFER--MERDYGFKRDKDSLRLVVEKLCE-----NGYASYAEKLVKDT 225
L + GR + F+R M +D GF +++ L + G+ Y L ++
Sbjct: 287 LCKVGRVNEA---FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN- 342
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
I PD + ++I+G G++++A M + GF T YN +L LC
Sbjct: 343 ---ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV---LCDHG 396
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D R A + +M N + + T ++I LCK ++A+++F MGE GC P
Sbjct: 397 DLER----AHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTV 452
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMK-------------SAGYAIGKKDYYEFLTRLCG 392
T+ LI Y+ R+ E + +M+ A + + + +C
Sbjct: 453 MTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQ 512
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++ +A + + G PD TY+ L+ C +D A LF E G+
Sbjct: 513 SGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGIS 567
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 43/270 (15%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDK 234
AGR L F + M++ GF D V++ LC++G A L + N + D
Sbjct: 360 AGRIEDALSFLDVMKKK-GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL---- 290
++I G C G +DEA ++ EM G + + YN ++D + R ++ L
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 291 --------------------DSE-----------------AEKVLLDMEYNGVPRNVETF 313
DSE A K+L + +GV +V T+
Sbjct: 479 EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTY 538
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LI+ LCK R + A++LF + G P+E T+ LI L +A R + + +
Sbjct: 539 NTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+G + Y + LC ++++ QA++++
Sbjct: 599 SGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 288 FRLDSEAEKV----LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW---- 339
RL S A++ L D G+P + F L++ R DA++ F RM E+
Sbjct: 111 LRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRP 170
Query: 340 -------------------------------GCHPNETTFLVLIKSLYQAARVGEGDEMI 368
GC PN T+ VL+ L + G+ +M
Sbjct: 171 TAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMF 230
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
D M G K Y L+ LC +I++A+ + MK G PD TY+ ++ C
Sbjct: 231 DEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKV 290
Query: 429 NRVDKA 434
RV++A
Sbjct: 291 GRVNEA 296
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 121/332 (36%), Gaps = 87/332 (26%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYG---FKR---------DKDSLRLVVEKLCEN 212
T + ID R GR + F +ME F R D +SLR +V +C++
Sbjct: 454 TYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQS 513
Query: 213 GYASYAEKLVKDTANE-IFPDDKICDLLIKGWC--------------------------- 244
G A KL++ + + PD + LI G C
Sbjct: 514 GQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITY 573
Query: 245 ---VDGKL-----DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR------------- 283
+DG L ++A L + + + G YN ++ LCR
Sbjct: 574 GTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM---RSLCRMKKLSQAINLWLD 630
Query: 284 ---KKDPFRLDSEA------------------EKVLLDMEYNGVPRNVETFNVLISNLCK 322
KK F ++SE E + +D EY + N + + + LC+
Sbjct: 631 YLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSN--PYTIWLIGLCQ 688
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+RR++DA+++F+ + E+G +LI L + +++ S + +
Sbjct: 689 VRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPV 748
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L LC R + A ++ +M G++ D
Sbjct: 749 GNRLLRWLCICYRRQDAQALAWRMHLVGYDMD 780
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 159/411 (38%), Gaps = 52/411 (12%)
Query: 82 ISQRLHLIFS-HVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDY 140
IS RL L+ S P L+ L P A L H L ++ ++H+ LS
Sbjct: 39 ISHRLRLLRSLQSVPADRLLSHPL---PSTAHACLA-AHLLARDRLYAHSRRVLSRLVAL 94
Query: 141 FGRRKDFKA-IHDFLVDNKEVLGPK--TLASCIDRL-------------VRAGRPTQVL- 183
RR A + D L LGP+ LAS +D L VRA + L
Sbjct: 95 --RRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELR 152
Query: 184 ---------GFFERMERDYGFKRDKD-----------SLRLVVEKLCENGYASYAEKLVK 223
R+ RD + + + +V++ LC+ G + A L
Sbjct: 153 VPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFS 212
Query: 224 DTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
PD + LI G+ G+LDE ++L EM R G + V YN +++C K
Sbjct: 213 RMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFG 272
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R + + M+ GV NV TF+ + CK +A+KLF +M G
Sbjct: 273 RMETAY-------GYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
NE T+ LI +A R+ + ++D M G + Y + LC ++ +A V
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
M+ G + Y L+ + +KA L E G+E+ Y
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLY 436
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 11/285 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID + G +V E M R G K D + ++ C+ G A
Sbjct: 225 TFNSLIDGYGKCGELDEVEQLVEEMRRS-GCKADVVTYNALINCFCKFGRMETAYGYFAA 283
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
E + + + +C +G + EA +L +M G L Y C++D K R
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 284 KKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
D VLLD M GVP NV T+ VL+ LCK R+ +A + M + G
Sbjct: 344 LDDAI--------VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVR 395
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
NE + LI + + ++ MK+ G + Y + LC + ++++A S+
Sbjct: 396 ANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSL 455
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
KM G P+ Y +M +V +A A+ + + +G +
Sbjct: 456 LTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/464 (20%), Positives = 165/464 (35%), Gaps = 106/464 (22%)
Query: 52 NPKTIDDPDQVIARSLSGELLENL-EADPLPISQRLHLIFSHVTPTPSLVQSTLNFS--P 108
N +T + +AR SG L+ L E P P +++ + L ++ FS
Sbjct: 156 NTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMK 215
Query: 109 EAGRA--ILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTL 166
E G ++ FN + DE + RR KA +V+ L
Sbjct: 216 EMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM--RRSGCKA---------DVVTYNAL 264
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
+C + GR G+F M+R+ G + + V+ C+ G A KL
Sbjct: 265 INCFCKF---GRMETAYGYFAAMKRE-GVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK---LC 282
+ ++ LI G C G+LD+A L EM R G L V Y ++D + K +
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380
Query: 283 RKKDPFRL-------------------------DSEAEKVLLDMEYNGVPRNVETFNVLI 317
+D R+ +A +L +M+ G+ ++ + LI
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG------------- 364
LC + + ++A L +M E G PN + ++ + +++ +V E
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500
Query: 365 -------------DEMIDR-------------------------------MKSAGYAIGK 380
+EM+ + M +G +
Sbjct: 501 PNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL 560
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
Y F++ C + + +A VF +M G PD Y+ L+T+
Sbjct: 561 FCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQ 604
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 9/266 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L +AG+ + F M++ GF D + VV+ C++G A +++++ +
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQ-GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 362
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P ++ G +LDEA L E G EL V Y+ ++D K+ R
Sbjct: 363 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI---- 418
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA +L +M G+ NV T+N L+ L K +A+ F M E C PN T+
Sbjct: 419 ---DEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 475
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + + + M+ G Y ++ L + I A S+FE+ K
Sbjct: 476 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 535
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKA 434
+G PD+ +++ L+ NR +A
Sbjct: 536 NGGIPDAASFNALIEGMSNANRAMEA 561
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 137/325 (42%), Gaps = 12/325 (3%)
Query: 123 QNAN-FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQ 181
NAN +T +FF GR++D I L+ L + +D + +AG +
Sbjct: 223 HNANPVVYTSLIRNFFIH--GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 280
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLI 240
FE + R YGF D S +++ L + G A + + F D + + ++
Sbjct: 281 GRMIFEDI-RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 339
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G+C GK+ +A + EM + Y I+D ++K+ R + + L EA+
Sbjct: 340 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS---- 395
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
G+ NV ++ LI K+ R ++A + M + G PN T+ L+ +L +A
Sbjct: 396 ---KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 452
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E MK Y + LC +++ +A ++ M+ G P+ TY
Sbjct: 453 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 512
Query: 421 LMTKWCAHNRVDKANALFDEAVRNG 445
+++ + A +LF+ NG
Sbjct: 513 MISGLAKVGNITDAYSLFERFKANG 537
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 146/369 (39%), Gaps = 35/369 (9%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDR 172
+++ FN LT DE LS F +KD + T ID
Sbjct: 87 SVVSFNSILTCLGKKRKVDEALSLFEV---MKKDAEP------------NSSTYNIIIDM 131
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
L GR + + ME F + ++ ++V++LC+ A K+ + + P
Sbjct: 132 LCLGGRVEEAYRILDEMEHASLFP-NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 190
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D LI G G++DEA RL +M G V Y ++ RK+D
Sbjct: 191 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED----- 245
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
K+ ++ G ++ N + + K E +F + +G P+ ++ +L
Sbjct: 246 --GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A + E + MK G+A+ + Y + C ++ +A + E+MK
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYL 460
P TY ++ +R+D+A LF+EA G+E+ Y R+D YL
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 423
Query: 461 KKPIAVKKG 469
+KKG
Sbjct: 424 ILEEMMKKG 432
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 128/318 (40%), Gaps = 34/318 (10%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGW 243
FF ++ G K D S ++ LC+ G AE+L A P + +I G+
Sbjct: 5 FFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL------------- 290
G+ ++A +L + G V++N IL C+ K + + L
Sbjct: 64 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 123
Query: 291 --------------DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
EA ++L +ME+ + N+ T N+++ LCK R+ E+A K+F
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ GC+P+ T+ LI L + +V E + ++M AG+ Y + R
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
E +F+++ G PD + M V+K +F++ G + Y +
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303
Query: 457 PRYLKKPIAVKKGKKRET 474
L K G+ RET
Sbjct: 304 IHGLTKA-----GQARET 316
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
A K +++ G+ + ++ +I LCK R +A +LF +M P + +I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
A R + ++++R++ G + LT L ++++A+S+FE MK D P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-P 120
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDE 440
+S TY++++ C RV++A + DE
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDE 147
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 15/287 (5%)
Query: 159 EVLGPKTLASCID--RLVRAG----RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
E++ + L S +D RL+ A R V+ F ++ME YG D S +++ C
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL-YGISHDLYSFTILIHCFCRC 119
Query: 213 GYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
S+A ++ + P L+ G+C+ ++ +A L M + G+E V Y
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N ++D LC+ + + A ++L +ME G+ +V T+N L++ LC R DA +
Sbjct: 180 NTLID---GLCKNGEL----NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
+ M + +P+ TF LI + + E E+ M + Y + LC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
R+ A F+ M + G P+ TY+ L++ +C VD+ LF
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 145/360 (40%), Gaps = 50/360 (13%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDR 172
+I+ F LT AN + + YF ++ + I + ++ L C R
Sbjct: 70 SIVDFTRLLTATANLRRYETVI-----YFSQKMELYGI------SHDLYSFTILIHCFCR 118
Query: 173 LVRAGRPTQVLGFFERMERD----------YGF---KRDKDSLRLVV------------- 206
R VLG ++ + +GF R D+ LV+
Sbjct: 119 CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 207 -----EKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEAKRLAREMY 260
+ LC+NG + A +L+ + + D + + L+ G C G+ +A R+ R+M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ V + ++D K LD EA+++ +M + V N T+N +I+ L
Sbjct: 239 KRSINPDVVTFTALIDVFVK------QGNLD-EAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
C R DA K F M GC PN T+ LI + V EG ++ RM G+
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + C + ++ A+ +F M + PD T+ +L+ C + ++ A FD+
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 129/306 (42%), Gaps = 14/306 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-E 228
ID L + G L ME+ G D + ++ LC +G S A ++++D
Sbjct: 183 IDGLCKNGELNIALELLNEMEKK-GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD LI + G LDEA+ L +EM + + V YN I ++ LC +
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI---INGLCMHGRLY 298
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+A+K M G NV T+N LIS CK R ++ +KLF RM G + + T+
Sbjct: 299 ----DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
LI Q ++ ++ M S + L LC IE A+ F+ M+
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
Y++++ C ++V+KA LF GV+ + Y + L K
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL-----CKN 469
Query: 469 GKKRET 474
G +RE
Sbjct: 470 GPRREA 475
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%)
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
S A VL M G ++ TF L+ C + R DA L M + G PN + L
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L + + E+++ M+ G Y LT LC R A + M
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
NPD T+ L+ + +D+A L+ E +++ V+
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ ++ +F +LI C+ R A+ + +M + G P+ TF L+ R
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+G+ ++ M +GY Y + LC + A+ + +M+ G D TY+
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
L+T C R A + + ++ +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSI 242
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A + +M ++ ++ F L++ +RR E I +M +G + +F +LI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
+ +R+ ++ +M GY + L C + RI A S+ M G+
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 413 PDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ Y+ L+ C + ++ A L +E + G+ Y
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 113/291 (38%), Gaps = 17/291 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-- 227
I+ + + G+ + F M F D + ++++ C+ G A +
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDV-TYSILIDSFCKRGKLDVALHFLGKMTEVG 420
Query: 228 ---EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
++P LI G C GKL AK L EM G + V Y ++ K
Sbjct: 421 IKATVYPYSS----LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGEL 476
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
+ FRL E M G+ N TF LIS LC R +A KLF M EW PN
Sbjct: 477 HNAFRLYHE-------MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
E T+ VLI+ + E++D M G Y ++ LC R+ +A
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
++ + + + L+ +C R+D A E + GV + Y V
Sbjct: 590 DLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSV 640
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 8/264 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLD 250
++GF + ++ +V+ L + G A LV + P + + LI C DGKLD
Sbjct: 313 EFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLD 372
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA+ L M G V Y+ ++D C++ +LD A L M G+ V
Sbjct: 373 EAESLFNNMGHKGLFPNDVTYSILID---SFCKRG---KLDV-ALHFLGKMTEVGIKATV 425
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
++ LIS CK+ + A LF M G PN + LI + + +
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G + + ++ LC R+ +A +F +M P+ TY++L+ C
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545
Query: 431 VDKANALFDEAVRNGVEVKPKEYR 454
+A L DE V G+ YR
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYR 569
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 11/260 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + G+ L F +M + G K ++ C+ G A+ L +
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMT-EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDE 450
Query: 225 -TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
AN + P+ I LI G+C +G+L A RL EM G T + + +S LC
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL---ISGLCH 507
Query: 284 KKDPFRLDSEAEKVLLDM-EYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
R+ +EA K+ +M E+N +P V T+NVLI CK + A +L M E G
Sbjct: 508 AN---RM-AEANKLFGEMVEWNVIPNEV-TYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ T+ LI L RV E E ++ ++ + + + L C R++ A+
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDA 622
Query: 403 FEKMKTDGHNPDSETYDLLM 422
+M G D Y +L+
Sbjct: 623 CREMLGRGVAMDLVCYSVLI 642
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ G C + + + + EM GF A + ++D + K F L ++ +K
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF- 349
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
GV ++ +N LI+++CK + ++A LF MG G PN+ T+ +LI S +
Sbjct: 350 ------GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKR 403
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ + +M G Y ++ C + ++ A S+F++M +G P+ Y
Sbjct: 404 GKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIY 463
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
L++ +C + A L+ E G + P Y
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKG--ISPNTY 496
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 124/326 (38%), Gaps = 69/326 (21%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D + R ++ LC G S A + + D E +++C L+ G+C +G+LD+A
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD-----------------------PFR 289
REM G + V Y+ + + + R++D
Sbjct: 620 LDACREMLGRGVAMDLVCYSVL---IYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTM 676
Query: 290 LDSEAEKVLLDMEYN--------GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
+D+ A+ L M + G NV T+ LI+ LCKI + A L M
Sbjct: 677 IDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS 736
Query: 342 HPNETTFL----------------------------------VLIKSLYQAARVGEGDEM 367
PN+ T+ +LI+ + R+ E E+
Sbjct: 737 LPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEV 796
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M +G + Y + C +++A+ ++E M G NPD+ Y+ L+ C
Sbjct: 797 LVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCV 856
Query: 428 HNRVDKANALFDEAVRNGVEVKPKEY 453
+ KA L D+ +R GV+ Y
Sbjct: 857 TGELTKAFELRDDMMRRGVKPNRATY 882
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 97/223 (43%), Gaps = 7/223 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD + +++ C A+ + M G +L YN + LC+ + +
Sbjct: 213 PDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVF---IRGLCKNQRVW-- 267
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA ++ + Y G+ +V T+ L+ LCK+ E ++ M E+G P+E
Sbjct: 268 --EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+ L + +G ++++++K G A Y + +C ++++A S+F M G
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKG 385
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
P+ TY +L+ +C ++D A + G++ Y
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPY 428
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 8/263 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G + D + +V LC+ E+++ + F P + L+ G G + A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L ++ + G YN + ++ +C+ +LD EAE + +M + G+ N T
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNAL---INSMCKDG---KLD-EAESLFNNMGHKGLFPNDVT 392
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+++LI + CK + + A+ +M E G + LI + ++ + D M
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ G Y ++ C + A ++ +M G +P++ T+ L++ C NR+
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512
Query: 433 KANALFDEAVRNGVEVKPKEYRV 455
+AN LF E V V Y V
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNV 535
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 113/276 (40%), Gaps = 9/276 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L A R + F M ++ ++ + +++E C+ G A +L+ +
Sbjct: 497 TFTALISGLCHANRMAEANKLFGEMV-EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + PD LI G C G++ EA+ ++ +L + ++ +L K R
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGR 615
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
D LD+ E M GV ++ ++VLI + + + I L +M + G P
Sbjct: 616 LDDA--LDACRE-----MLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRP 668
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + +I + +A + + D M S G Y + LC I +++A +
Sbjct: 669 DNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLC 728
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+M P+ TY + + ++KA L D
Sbjct: 729 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD 764
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 64/141 (45%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G+ + T + +++ L +IR+ A+ LF + G P+ + +++SL +
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
E+I RM+S+G + Y F+ LC +R+ +A+ + + G D TY L+
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294
Query: 425 WCAHNRVDKANALFDEAVRNG 445
C + + +E + G
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFG 315
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 67/178 (37%), Gaps = 35/178 (19%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G+ +V + ++ +LC+++ A ++ RM GC + T+ V I+ L + RV E
Sbjct: 209 SGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWE 268
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE-------------------------- 397
E+ + + G Y + LC +E E
Sbjct: 269 AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVD 328
Query: 398 ---------QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
A + K+K G P Y+ L+ C ++D+A +LF+ G+
Sbjct: 329 GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGL 386
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 19/295 (6%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA 226
+ ID L ++G + +FE+M D G + ++ LC AE+L+ +
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE-- 471
Query: 227 NEIFPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
D IC + +I C +G++ E+++L M R G + + YN ++D
Sbjct: 472 ---MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC- 527
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
L K D EA K+L M GV ++ T+ LI+ C++ R +DA+ LF M G
Sbjct: 528 LAGKMD------EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
PN T+ ++++ L+ R E+ + +G + Y L LC ++A+
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+F+ + ++ T+++++ R+D+A LF NG+ + Y +
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 137/320 (42%), Gaps = 30/320 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T +S ++ L + GR T+ F+ M + G + D + R +++ G L+
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTK-RGLEPDIATYRTLLQGYATKGALVEMHALLDL 366
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N I PD + ++LI + K+D+A + +M + G V Y ++D + K
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 284 KKDPF-----RLDS-----------------------EAEKVLLDMEYNGVPRNVETFNV 315
D +D +AE+++L+M G+ N FN
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I + CK R ++ KLF M G P+ T+ LI A ++ E +++ M S G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + C + R++ A+++F++M + G +P+ TY++++ R A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
L+ ++G +++ Y +
Sbjct: 607 ELYVSITKSGTQLELSTYNI 626
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 9/276 (3%)
Query: 181 QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLL 239
Q + F +M R +G + V++ LC++G A + +E + P+ + L
Sbjct: 394 QAMLVFSKM-RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
I G C K D+A+ L EM G L T+ +N I+D K R E+EK+
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI-------ESEKLFD 505
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
M GV ++ T+N LI C + ++A KL M G P+ T+ LI + +
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
R+ + + M S+G + Y L L R A ++ + G + TY+
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+++ C +N D+A +F ++++ + + +
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 239 LIKGWCVDGKLDEAKRLA-REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
L+KG C D + +A + R M G +YN +L + R ++ L +
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL----LHM 188
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ D G P +V ++N +++ K S+ A ++ M + G P+ T+ +I +L +
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
A + + E+++ M G Y L C + ++A+ +KM++DG P+ T
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 418 YDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
Y LM C + R +A +FD + G+E YR
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 345
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 8/248 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G +EKL + PD + LI G C+ GK+DEA +L M G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V Y +++ ++ R D L E M +GV N+ T+N+++ L
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKE-------MVSSGVSPNIITYNIILQGLFHT 599
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR+ A +L+ + + G +T+ +++ L + E M + + + +
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ L R+++A +F +G PD TY L+ +++ + LF
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719
Query: 444 NGVEVKPK 451
NG +
Sbjct: 720 NGCSADSR 727
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 123/288 (42%), Gaps = 13/288 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T A I RAGR + + GF+ D + +++ LC + S A +V
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKK-GFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152
Query: 225 TANEI--FPDDKICDLLIKGWCVDGKLDEAKRLAREMY---RGGFELGTVAYNCILDCVS 279
E+ PD + L+KG C + + EA L M GG V+YN +L+
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K + E +LD G+ +V T++ +I+ LCK + + A+++ M +
Sbjct: 213 KEGDSDKAYSTYHE----MLD---RGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ T+ ++ + + E + +M+S G Y + LC R +A
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
+F+ M G PD TY L+ + + + +AL D VRNG++
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 9/269 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
S ID + GR + F+ M R G K D + +++ C G A KL+ +
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+ PD LI G+C ++D+A L +EM G + YN IL +
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT----- 599
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
R + A+++ + + +G + T+N+++ LCK +++A+++F +
Sbjct: 600 --RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
TF ++I +L + R+ E ++ + G + Y L +E+ +F M
Sbjct: 658 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 717
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
+ +G + DS + ++ K + +A
Sbjct: 718 EENGCSADSRMLNSIVRKLLQRGDITRAG 746
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 41/304 (13%)
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF 230
D L+R GR + YG R V + S ++ + A ++
Sbjct: 44 DELLRRGRGASI----------YGLNRALAD----VARHSPAAAVSRYNRMARAGAGKVT 89
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P +LI C G+LD + + GF + + + +L LC K R
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLL---KGLCADK---RT 143
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE---WGCHPNETT 347
+ VL M G +V ++N L+ LC RS++A++L + M + G P+ +
Sbjct: 144 SDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203
Query: 348 FLVLIKSLYQAARVGEGD---------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
+ ++ ++ EGD EM+DR G Y + LC + +++
Sbjct: 204 YNTVLNGFFK-----EGDSDKAYSTYHEMLDR----GILPDVVTYSSIIAALCKAQAMDK 254
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR 458
AM V M +G PD TY+ ++ +C+ + +A + +GVE Y
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 314
Query: 459 YLKK 462
YL K
Sbjct: 315 YLCK 318
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 18/294 (6%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L SC L + G+ ++R+ + D+ S ++ LC+ A + +
Sbjct: 113 LVSC---LCKNGKVDAAYELYKRLSDECSL--DRISYNMLTYGLCKADQIDRALAVFGEM 167
Query: 226 A-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----AYNCILDCVSK 280
N + P + L+ G+C G++++A L EM G V +YN + +S
Sbjct: 168 EENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTV---ISG 224
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
C+ R A VL M +G NV TFN L+ LC + ++A +F M E
Sbjct: 225 FCKA----RQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERN 280
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P T+ VLI +A R+ + ++ M G Y + LC ++E A+
Sbjct: 281 CEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDAL 340
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN-GVEVKPKEY 453
+ ++M + G P+ TY ++ C ++++A LF++A+ + + KP Y
Sbjct: 341 EILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSY 394
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 32/294 (10%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWC 244
F+ R F+ + + L + G+ S A K+ D E P+ ++++G C
Sbjct: 24 FKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLC 83
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK----------LCRKKDPFRLD--- 291
D K D A L ++M T N ++ C+ K R D LD
Sbjct: 84 DDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRIS 143
Query: 292 --------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM- 336
A V +ME N V ++ T+N L+ C+ R E A+ L M
Sbjct: 144 YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMI 203
Query: 337 -GEWGCH--PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
G+ G P+ ++ +I +A ++ ++ RM +G + + L LC
Sbjct: 204 EGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLT 263
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++++A ++FE M P + TY +L+T R+DKAN F + +R GVE
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVE 317
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 115/285 (40%), Gaps = 14/285 (4%)
Query: 175 RAGRPTQVLGFFERM---ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IF 230
RAGR Q + E M ++ D S V+ C+ A +++
Sbjct: 188 RAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCS 247
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ + L+ G C+ GKLDEA + M E V Y ++ ++ R+
Sbjct: 248 PNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHAR------ALRI 301
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D +A +DM GV NV T+ LI LC + EDA+++ RM G PN T+
Sbjct: 302 D-KANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTR 360
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT---RLCGIERIEQAMSVFEKMK 407
+I +L + ++ ++ + + A K D Y + T LC + +A F +M
Sbjct: 361 VIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMV 420
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
Y + +K + EA +G+E++ K+
Sbjct: 421 ESKLVAKPHIYKAMADGLELVQETEKVERVCLEASAHGIELQQKD 465
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 149/354 (42%), Gaps = 14/354 (3%)
Query: 97 PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD 156
P V + + + +A+ FN + + F HT T + G F+A+ + LVD
Sbjct: 7 PKHVTAVIKCQKDPMKALEMFNS-MRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVD 65
Query: 157 NKEVLGPKTL----ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCEN 212
+E +G L + R G+ + + FERM+ Y + S ++ L ++
Sbjct: 66 MRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDF-YDCEPTVFSYNAIMSVLVDS 124
Query: 213 GYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
GY A K+ + I PD + +K +C + A RL M G E+ VAY
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
C ++ F+ +E ++ M +GV + TFN L+ LCK ++ K
Sbjct: 185 -----CTVVGGFYEENFK--AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
L ++ + G PN T+ + I+ L Q + M+ + G Y + LC
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+ ++A KM +G PDS TY+ L+ +C V A + +AV NG
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 8/248 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEA 252
G + D + ++ C+ G AE++V D N PD LI G C +G+ + A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L E G + + YN ++ +S + EA ++ +M G+ V+T
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQ-------GMILEAAQLANEMSEKGLIPEVQT 428
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN+L++ LCK+ DA L M G P+ TF +LI ++ E++D M
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
G Y L LC + E M ++ M G P+ T+++L+ C + ++D
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 433 KANALFDE 440
+A L +E
Sbjct: 549 EALGLLEE 556
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 44/275 (16%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S ID L G + L F G K + +++ L G A +L +
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNE-ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ + + P+ + ++L+ G C G + +A L + M G+ +N ++ S +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++ E V+LD NGV +V T+N L++ LCK + ED ++ + M E GC P
Sbjct: 477 MENAL----EILDVMLD---NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
N TF +L++S LC ++++A+ +
Sbjct: 530 NLFTFNILLES-----------------------------------LCRYRKLDEALGLL 554
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
E+MK NPD+ T+ L+ +C + +D A LF
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 14/290 (4%)
Query: 161 LGPKTLASCIDRLVRAGR-PTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG-YASYA 218
+GP L + +++ + P + L F M ++ GFK + R V+EKL G + +
Sbjct: 1 MGPPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 219 EKLV---KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
E LV ++ N + + + K + GK+ EA + M E +YN I+
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAM--KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIM 118
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ D D +A KV + M G+ +V +F + + + CK R A++L
Sbjct: 119 SVLV------DSGYFD-QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNN 171
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M GC N + ++ Y+ EG E+ +M ++G ++ + + L LC
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+++ + +K+ G P+ TY+L + C +D A + + G
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 8/248 (3%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDTANEI-FPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
+ L ++ LC+ G A ++V + PD + LI G C + K EA+ +M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G E + YN + ++ C+ + AE+++ D +NG + T+ LI
Sbjct: 313 VNEGLEPDSYTYNTL---IAGYCKGG----MVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIG 379
LC + A+ LF G PN + LIK L + E ++ + M G
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 380 KKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFD 439
+ + + LC + + A + + M + G+ PD T+++L+ + +++ A + D
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 440 EAVRNGVE 447
+ NGV+
Sbjct: 486 VMLDNGVD 493
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 16/167 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ID + G F +ME Y + +++ E + AEKL ++
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 225 TANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ PD L++ G+C G ++ + EM GF +++C LC
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC---LCV 684
Query: 284 KKDPFRLDSEAEKVLLDMEYNG-VPRNVETFNVLISNLCKIRRSEDA 329
+ + EA ++ M G VP V T +C + + E A
Sbjct: 685 EDRVY----EAAGIIHRMVQKGLVPEAVNT-------ICDVDKKEVA 720
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 7/181 (3%)
Query: 295 EKVLLDMEYNGVPRNVETFNV-LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
E+VL+DM N +E V + N + + ++A+ +F RM + C P ++ ++
Sbjct: 60 EEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMS 119
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRL---CGIERIEQAMSVFEKMKTDG 410
L + + ++ RM+ G D Y F R+ C R A+ + M + G
Sbjct: 120 VLVDSGYFDQAHKVYMRMRDRGIT---PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGK 470
+ Y ++ + N + LF + + +GV + + R L K VK+ +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 471 K 471
K
Sbjct: 237 K 237
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 18/185 (9%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP------FRL 290
++L++ C KLDEA L EM V + ++D C+ D FR
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID---GFCKNGDLDGAYTLFRK 591
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
EA KV + T+N++I + A KLF M + P+ T+ +
Sbjct: 592 MEEAYKV---------SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
++ + V G + + M G+ + LC +R+ +A + +M G
Sbjct: 643 MVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Query: 411 HNPDS 415
P++
Sbjct: 703 LVPEA 707
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 9/280 (3%)
Query: 168 SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN 227
+ ID L + L F M+ + G + D + ++ LC G S A +L+ D
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 228 -EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKD 286
+I P+ LI + +GKL EA++L EM + + Y+ + ++ C
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL---INGFCMHD- 377
Query: 287 PFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
RLD L + + P NV T++ LI CK +R E+ ++LF M + G N
Sbjct: 378 --RLDEAKHMFELMISKDCFP-NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
T+ LI +QA + +M S G Y L LC ++ +AM VFE +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ PD TY++++ C +V+ LF GV
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 142/349 (40%), Gaps = 34/349 (9%)
Query: 154 LVDNKEVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD +G K T + I L + ++ + ++M + G + D + VV L
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGL 233
Query: 210 CENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ G A L+K +I D I + +I G C +D+A L EM G
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 269 VAYNCILDCVSKLCRKKDPFRLDS----------------------------EAEKVLLD 300
Y+ ++ C+ R D RL S EAEK+ +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M + ++ T++ LI+ C R ++A +F M C PN T+ LIK +A R
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V EG E+ M G Y + + A VF++M + G +P+ TY++
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKG 469
L+ C + ++ KA +F+ R+ +E Y + + K V+ G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 143/335 (42%), Gaps = 38/335 (11%)
Query: 114 ILGFNHWLTQNANFSHTDETLSFFTDY---------------------FGRRKDFKAIHD 152
++ +N + + H D+ L+ FT+ +GR D +
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 153 FLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKD----SLRLVVEK 208
+++ K T ++ ID V+ G+ + ++ M KR D + ++
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-----IKRSIDPDIFTYSSLING 372
Query: 209 LCENGYASYAEKLVK-DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELG 267
C + A+ + + + + FP+ LIKG+C +++E L REM + G
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
TV Y + + + +D A+ V M GV N+ T+N+L+ LCK +
Sbjct: 433 TVTYTTL---IHGFFQARDC----DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 328 DAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFL 387
A+ +F + P+ T+ ++I+ + +A +V +G E+ + G + Y +
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
+ C E+A S+ +KMK DG P+S TY+ L+
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 7/199 (3%)
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
K + L +M G Y+ ++C CR+ S A VL M G
Sbjct: 98 KFELVISLGEQMQTLGISHDLYTYSIFINC---FCRRSQL----SLALAVLAKMMKLGYE 150
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
++ T + L++ C +R DA+ L +M E G P+ TF LI L+ + E +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+D+M G Y + LC I+ A+S+ +KM+ D Y+ ++ C
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 428 HNRVDKANALFDEAVRNGV 446
+ +D A LF E G+
Sbjct: 271 YKHMDDALNLFTEMDNKGI 289
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL 239
T + GFF+ RD D+ ++V +++ G + P+ ++L
Sbjct: 438 TLIHGFFQ--------ARDCDNAQMVFKQMVSVG---------------VHPNILTYNIL 474
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLL 299
+ G C +GKL +A + + R E YN +++ + K + +D + L
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL-------FC 527
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
++ GV NV +N +IS C+ E+A L +M E G PN T+ LI+ A
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR-----A 582
Query: 360 RVGEGD-----EMIDRMKSAGYA 377
R+ +GD E+I M+S G+A
Sbjct: 583 RLRDGDREASAELIKEMRSCGFA 605
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+ I +C +L A + +M + G+E V + +L+ C K R+ S+A +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN---GYCHSK---RI-SDAVAL 175
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+ M G + TF LI L ++ +A+ L +M + GC P+ T+ ++ L +
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSET 417
+ ++ +M+ Y + LC + ++ A+++F +M G PD T
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 418 YDLLMTKWCAHNRVDKANALFDEAV 442
Y L++ C + R A+ L + +
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMI 320
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE 366
P VE FN L+S + K+ + E I L +M G + T+ + I + +++
Sbjct: 81 PSIVE-FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWC 426
++ +M GY L C +RI A+++ ++M G+ PD+ T+ L+
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 427 AHNRVDKANALFDEAVRNGVE 447
HN+ +A AL D+ V+ G +
Sbjct: 200 LHNKASEAVALVDQMVQRGCQ 220
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 106/267 (39%), Gaps = 9/267 (3%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLI 240
V+ E+M+ G D + + + C S A ++ + PD L+
Sbjct: 102 VISLGEQMQT-LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL 160
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G+C ++ +A L +M G++ T + ++ + L K SEA ++
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF-LHNKA------SEAVALVDQ 213
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G ++ T+ +++ LCK + A+ L +M + + + +I L +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ + + M + G Y ++ LC R A + M NP+ T+
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ + ++ +A L+DE ++ ++
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSID 360
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 204 LVVEKLCENGYASYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREM 259
++++ LC+NG + A E L + T PD +++I+G C GK+++ L +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTME---PDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 260 YRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISN 319
G +AYN + +S CRK EA+ +L M+ +G N T+N LI
Sbjct: 530 SLKGVSPNVIAYNTM---ISGFCRKGSK----EEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ E + +L M G + +T ++ L+
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 131/294 (44%), Gaps = 18/294 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL--CE---NGYASYAE 219
T + ID + G + F+ M + G + SL ++E C+ N + + +
Sbjct: 300 TYSVLIDGCCKNGNIEKAFEFYSEM-KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 358
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L AN +F + L+ C +GK++EA L E+ G V+YN I +
Sbjct: 359 ALESGLAN-VFTFNT----LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI---IL 410
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
CRK + + A KV +M NG N TF +L+ K E+A +F+RM +
Sbjct: 411 GHCRKDNI----NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 466
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
P +TT ++IK L +A R EG ++ ++ S G+ Y + I A
Sbjct: 467 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 526
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+V+ +M G P + TY L+ +C N +D A L ++ R G+++ K Y
Sbjct: 527 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 580
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 11/302 (3%)
Query: 150 IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
++ ++DN T +D + G F RM +D +L ++++ L
Sbjct: 424 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM-KDANILPTDTTLGIIIKGL 482
Query: 210 CENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
C+ G + L ++ F P + +I G+ +G ++ A + REM G T
Sbjct: 483 CKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPST 542
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
V Y ++D C+ + A K+L DM+ G+ +++ + LI CK R +
Sbjct: 543 VTYTSLID---GFCKGNNI----DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKS 595
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A +L + G PN + +I V E ++ +M + G K Y +
Sbjct: 596 AHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLID 655
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
L R+ A + +M + G PD + +L+ C + + A + ++ NG +
Sbjct: 656 GLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM--NGKNM 713
Query: 449 KP 450
P
Sbjct: 714 IP 715
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+KG+C+ G L A L E+ G V Y+ ++D K + F SE
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSE----- 323
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ G+ +V + N ++ K + ++A +F E G N TF L+ L +
Sbjct: 324 --MKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKE 380
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ E + D + + G + Y + C + I A V+++M +G P++ T+
Sbjct: 381 GKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTF 440
Query: 419 DLLMTKWCAHNRVDKANALF 438
+LM + ++ A ++F
Sbjct: 441 TILMDGYFKKGDIENAFSIF 460
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 109/280 (38%), Gaps = 45/280 (16%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPD 232
L R PT L +FER+++ F + D++ +++ L + A+ L A+
Sbjct: 89 LNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETHRAQYLFDQFAS----- 143
Query: 233 DKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS 292
GK +V ++C++D + + C K F LD
Sbjct: 144 --------------GK-------------------SVRFSCLMDRLVE-CTKLYNFPLDI 169
Query: 293 ------EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET 346
EAE+ L + GV + E +++ + LC S A+ L M G P E
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229
Query: 347 TFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
TF +I + + V E + D M + G ++ + C + A+ + ++
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289
Query: 407 KTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P+ TY +L+ C + ++KA + E G+
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGI 329
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 112/294 (38%), Gaps = 44/294 (14%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
TL I L +AGR + F + GF +++ + G + A + ++
Sbjct: 474 TLGIIIKGLCKAGRSFEGRDLFNKFVSQ-GFVPTCMPYNTIIDGFIKEGNINLASNVYRE 532
Query: 225 TAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
I P LI G+C +D A +L +M R G ++ AY ++D C+
Sbjct: 533 MCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID---GFCK 589
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
++D A ++L ++ G+ N +N +I+ + E+AI L+ +M G
Sbjct: 590 RRDM----KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPC 645
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ T+ LI L ++ R+ ++ M S G + + + LC + E A +
Sbjct: 646 DLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKIL 705
Query: 404 EKMK--------------TDGH---------------------NPDSETYDLLM 422
E M GH PD+ TYD+L+
Sbjct: 706 EDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 759
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEV-LGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDY 193
D F +R+D K+ H+ L + + L P S I + + +++M +
Sbjct: 583 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE- 641
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G D + +++ L ++G YA + + ++ I PDD+ +LI G C G+ + A
Sbjct: 642 GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 701
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+++ +M + YN ++ K ++ FRL E +LD VP N+ T
Sbjct: 702 RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDE----MLDRGL--VPDNI-T 754
Query: 313 FNVLIS 318
+++L++
Sbjct: 755 YDILVN 760
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 21/291 (7%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILG---FNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
+++ PT + + + +AGR+ G FN +++Q F T + D F + +
Sbjct: 466 ANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG--FVPTCMPYNTIIDGFIKEGNI 523
Query: 148 KAIHDFLVDNKEV-LGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
+ + EV + P T+ S ID + L M+R G K D +
Sbjct: 524 NLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK-GLKMDIKAYGT 582
Query: 205 VVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ A +L+ + + P+ I + +I G+ ++EA L ++M G
Sbjct: 583 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 642
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
Y ++D + K R A + +M G+ + VLI+ LC
Sbjct: 643 IPCDLKTYTSLIDGLLKSGRLL-------YASDIHTEMLSKGILPDDRAHTVLINGLCNK 695
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG----DEMIDR 370
+ E+A K+ M P+ + LI ++ + E DEM+DR
Sbjct: 696 GQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 746
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 35/296 (11%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA----SYAE-----------KL 221
GRPT L + + + Y D D V+E + NG SY E +L
Sbjct: 464 GRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMEL 523
Query: 222 VKDTANEIF-----PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
NE+ P++ LI G+C D KLD A R+ M R G YN ++
Sbjct: 524 ASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIH 583
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
++K ++ F E KV+L+ + + +V T++ +I+ LC A+++F +M
Sbjct: 584 GLTK----QNNFSGAEELCKVMLEEK---ISPDVVTYSTVINGLCNNGAIPLALEMFNKM 636
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ GC PN T+ LI++L Q RV E +EM +K G + Y + + ++
Sbjct: 637 VKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKV 696
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLM----TKWCAHNRVDKANA----LFDEAVRN 444
++A +M G P +TYD+L+ + H V NA FD+ + N
Sbjct: 697 DRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIIN 752
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 24/291 (8%)
Query: 162 GPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASY 217
GPK T + + +L + + V+ + ++ R+ G + + V+ LC++G
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILRE-GLQPNLLIYNSVINALCKDGNVRD 246
Query: 218 AEKLVKDTANEIF-----PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
AE ++ N++F PD +I G+C + LD A + M G E Y+
Sbjct: 247 AESII----NKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYS 302
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
+ ++ LC R++ EA + +M +GV V TF I LC + R EDA K+
Sbjct: 303 TL---INGLCNSG---RVN-EALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKI 355
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F M + GC PN T+ LI S + +R+ G + RM G Y + L
Sbjct: 356 FIDMKKKGCKPNVYTYTSLI-SGQRVSRMAIG--LFHRMSRDGVVPNTVTYNALMNVLME 412
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
I+ A+ VF M G P++ +Y+ L+ +C +KA ++ ++
Sbjct: 413 NMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLK 463
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 12/292 (4%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ L +GR + L F M R +G + + LC+ G A K+ D
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTR-HGVLPTVHTFTAPIVALCDMGRIEDAWKIFID 358
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
+ P+ LI G V A L M R G TV YN +++ +
Sbjct: 359 MKKKGCKPNVYTYTSLISGQRVSRM---AIGLFHRMSRDGVVPNTVTYNALMNVL----- 410
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
+ +DS A V M +G N ++N LI C I +E A+ + M + P
Sbjct: 411 -MENMEIDS-ALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTP 468
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ ++IK + +++ MK+ G + Y E ++ C I ++E A +F
Sbjct: 469 TLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMF 528
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+M G P+ TY L++ +C ++D A + + R+G + Y V
Sbjct: 529 NEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 258 EMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLI 317
++ R G + + YN +++ + K +D AE ++ + +G+ + T+ +I
Sbjct: 218 QILREGLQPNLLIYNSVINALCKDGNVRD-------AESIINKVFKSGMKPDTFTYTSMI 270
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
C+ R + A ++F RM E GC PN T+ LI L + RV E + I M G
Sbjct: 271 LGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVL 330
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK-ANA 436
+ + LC + RIE A +F MK G P+ TY T + RV + A
Sbjct: 331 PTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTY----TSLISGQRVSRMAIG 386
Query: 437 LFDEAVRNGV 446
LF R+GV
Sbjct: 387 LFHRMSRDGV 396
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 8/266 (3%)
Query: 204 LVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++++ C++G A ++++ AN PD+ LI G+C K++ A + EM
Sbjct: 475 IIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR 534
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
G V Y + +S C+ + +LD A ++L M+ +G NV+T+NVLI L K
Sbjct: 535 GLCPNEVTYTAL---ISGYCKDE---KLDCAA-RMLERMKRSGCRPNVQTYNVLIHGLTK 587
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
A +L M E P+ T+ +I L + EM ++M G
Sbjct: 588 QNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHT 647
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAV 442
Y + L R+E+A +F ++K G PD TY ++ +VD+A E +
Sbjct: 648 YSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMI 707
Query: 443 RNGVEVKPKEYRVDPRYLKKPIAVKK 468
G + + Y V + L+ + K
Sbjct: 708 NAGCQPTLQTYDVLIKGLQNEMVYHK 733
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
+++IKG+C G D A R+ M G + +Y + +S C K L S
Sbjct: 474 NIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYT---ELISGFC-KISKMELASGMFN 529
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
++D G+ N T+ LIS CK + + A ++ RM GC PN T+ VLI L
Sbjct: 530 EMMD---RGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLT 586
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
+ +E+ M + Y + LC I A+ +F KM G P+
Sbjct: 587 KQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLH 646
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
TY L+ RV++A +F E + G+
Sbjct: 647 TYSSLIQALGQEGRVEEAEEMFSELKKQGL 676
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 62/135 (45%)
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
T+ L+ L K+ + + ++++ G PN + +I +L + V + + +I+++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
+G Y + C ++ A +F +M +G P++ TY L+ C RV
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 432 DKANALFDEAVRNGV 446
++A E R+GV
Sbjct: 315 NEALDFISEMTRHGV 329
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 114/293 (38%), Gaps = 31/293 (10%)
Query: 185 FFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGW 243
ERM+R G + + + +++ L + S AE+L K E I PD +I G
Sbjct: 562 MLERMKRS-GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGL 620
Query: 244 CVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEY 303
C +G + A + +M + G Y+ ++ + + R + EAE++ +++
Sbjct: 621 CNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVE-------EAEEMFSELKK 673
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY------- 356
G+ + T+ +I + + A M GC P T+ VLIK L
Sbjct: 674 QGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHK 733
Query: 357 -----QAARVGEGDEMI----------DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
AA D+ I ++ + + ++ Y L+RL R +A +
Sbjct: 734 LVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANN 793
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
++ M + P+ +TY + +VD A +F E+ Y+
Sbjct: 794 LYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYK 846
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 124/324 (38%), Gaps = 42/324 (12%)
Query: 119 HWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPK--TLASCIDRLVRA 176
H LT+ NFS +E + E + P T ++ I+ L
Sbjct: 583 HGLTKQNNFSGAEELCKVMLE-------------------EKISPDVVTYSTVINGLCNN 623
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKI 235
G L F +M + +G + + +++ L + G AE++ + + + PD+
Sbjct: 624 GAIPLALEMFNKMVK-HGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVT 682
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+I+ + GK+D A EM G + Y+ ++ + L + A
Sbjct: 683 YVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAAS 742
Query: 296 KVLLDMEYNGVPRNV-----------------ETFNVLISNLCKIRRSEDAIKLFYRMGE 338
D + + ++V + ++ L+S L + R +A L+ M
Sbjct: 743 TSTFDDQI--INKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVS 800
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
PN+ T+ + SL +A +V ++ M + Y E + LC + R ++
Sbjct: 801 QSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKE 860
Query: 399 AMSVFEKMKTDGHNPDSETYDLLM 422
A VFEKM + N D + +L+
Sbjct: 861 ARFVFEKMLSRALNADEIVWTILI 884
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D S +V LC G YA +LV +P + + L++G C+ G L ++
Sbjct: 127 GIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQS 186
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L + + G Y+ +L+ K R EA K+L ++ G N+ +
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYK-------ERGADEASKLLDEIIAKGGKPNLVS 239
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NVL++ LCK R+EDA++LF + G PN ++ +L++SL R E + ++ M
Sbjct: 240 YNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMD 299
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y + L R E A+ V E+M P + +Y+ ++ + C +VD
Sbjct: 300 GDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVD 359
Query: 433 KANALFDEAV 442
D+ +
Sbjct: 360 LVVKCLDQMM 369
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ C K+ +A ++ M G +Y + VS LCRK +
Sbjct: 95 PDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFL---VSSLCRKGNV--- 148
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A +++ ME G P N T+N L+ LC +++L R+ + G PN T+
Sbjct: 149 -GYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+++ Y+ E +++D + + G Y LT LC R E AM +F ++ + G
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG 267
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+P+ +Y++L+ C R ++AN L E
Sbjct: 268 FSPNVVSYNILLRSLCNEGRWEEANVLLAE 297
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 10/270 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+ L R G + ++ME +YG+ + + +V LC +G + + +L+ +
Sbjct: 139 VSSLCRKGNVGYAMQLVDKME-EYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ L++ + DEA +L E+ G + V+YN +L + K R +D
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L E + G NV ++N+L+ +LC R E+A L M P+ T+
Sbjct: 258 QLFRE-------LPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTY 310
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI SL R E+++ M A + Y + RLC +++ + ++M
Sbjct: 311 NILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMY 370
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
NP+ TY+ + T C V +A ++
Sbjct: 371 RHCNPNEGTYNAIAT-LCEEGMVQEAFSII 399
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 35/319 (10%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD E G T + + LVR G TQ L +R+ + G + + ++E
Sbjct: 154 LVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQK-GLVPNAYTYSFLLEAA 212
Query: 210 CENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
+ A A KL+ + A P+ ++L+ G C +G+ ++A +L RE+ GF
Sbjct: 213 YKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNV 272
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSE----------------------------AEKVLLD 300
V+YN +L + R ++ L +E A +VL +
Sbjct: 273 VSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEE 332
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M ++N +I+ LCK R+ + +K +M C+PNE T+ I +L +
Sbjct: 333 MIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGM 391
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E +I + + + ++ Y +T LC A + +M G PDS TY
Sbjct: 392 VQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451
Query: 421 LMTKWCAHNRVDKANALFD 439
L+ C +++A +F
Sbjct: 452 LIRGLCMEGMLNEAIEIFS 470
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 44/303 (14%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L + GR + F + GF + S +++ LC G A L+ + +E P
Sbjct: 247 LCKEGRTEDAMQLFRELPSK-GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSP 305
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
++LI + G+ + A + EM R F+ +YN I +++LC+ + ++D
Sbjct: 306 STVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPI---IARLCKDR---KVD 359
Query: 292 SEAEKVLLDMEYNGVPRNVETFN----------------------------------VLI 317
K L M Y N T+N ++I
Sbjct: 360 LVV-KCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVI 418
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
++LC+ + A +L Y M ++G P+ T+ LI+ L + E E+ M+
Sbjct: 419 TSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIK 477
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ ++Y + C R + A+ VFE M G+ + TY +L+ +D A +
Sbjct: 478 LDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEV 537
Query: 438 FDE 440
E
Sbjct: 538 LRE 540
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%)
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ +LCK + AIK+ M G P+ ++ L+ SL + VG +++D+M+ G
Sbjct: 103 LLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYG 162
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y Y + LC + Q++ + +++ G P++ TY L+ D+A+
Sbjct: 163 YPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAS 222
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
L DE + G + Y V
Sbjct: 223 KLLDEIIAKGGKPNLVSYNV 242
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 206 VEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LCE G A +++ N + F + ++I C G A +L EM + GF
Sbjct: 383 IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGF 442
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ Y+ + + LC + + +EA ++ ME N + + E +N LI CK R
Sbjct: 443 TPDSFTYSSL---IRGLCMEG----MLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSR 494
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
R++ A+ +F M G NETT+ +L++ + + E++ ++
Sbjct: 495 RTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 542
>gi|259489858|ref|NP_001159344.1| uncharacterized protein LOC100304439 [Zea mays]
gi|223943533|gb|ACN25850.1| unknown [Zea mays]
Length = 322
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 12/282 (4%)
Query: 161 LGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK 220
L P T ++ I + P Q + F R+ R +G + + +++ LC NG + A K
Sbjct: 8 LSPTTFSAVISSYGHSRLPDQAVEVFNRLPR-FGCPQTTEVYNALLDALCANGNFTGAYK 66
Query: 221 LVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L++ A + + PD L+ WC GKL EA+ +M G + ++D +
Sbjct: 67 LLRRMARKGVAPDRATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLV 126
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+ + +A+ L M G+ +V TFN L LC + A+ L
Sbjct: 127 RAGHLE-------QAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVSLLADASSR 179
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ +T+ V++ ++ + ++ E + G+ Y + LC R A
Sbjct: 180 GLCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAIIKALCKAGRFADA 239
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNR--VDKANALFD 439
+ F MKT GH P+ Y +++ K C V+ AN L +
Sbjct: 240 FAFFGDMKTKGHPPNRPVY-VMLVKMCVRGGRFVEAANYLVE 280
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 74/187 (39%), Gaps = 5/187 (2%)
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
RL +A +V + G P+ E +N L+ LC A KL RM G P+ TF
Sbjct: 24 RLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRMARKGVAPDRATF 83
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
L+ S A ++ E +D M G + + L +EQA + +M
Sbjct: 84 STLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLEQAKAFALRMTK 143
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKK 468
+G PD T++ L C VD A +L +A G+ Y+V P K
Sbjct: 144 EGILPDVATFNSLAEALCNAGDVDFAVSLLADASSRGLCPDISTYKV-----MLPAVAKV 198
Query: 469 GKKRETL 475
GK E
Sbjct: 199 GKIEEAF 205
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 9/187 (4%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D LVRAG Q F RM ++ G D + + E LC G +A L+ D ++
Sbjct: 122 VDGLVRAGHLEQAKAFALRMTKE-GILPDVATFNSLAEALCNAGDVDFAVSLLADASSRG 180
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ PD +++ GK++EA RL G Y I+ + K R D F
Sbjct: 181 LCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAIIKALCKAGRFADAF 240
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
DM+ G P N + +L+ + R +A M E G P TF
Sbjct: 241 AF-------FGDMKTKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGFTPRAPTF 293
Query: 349 LVLIKSL 355
++ L
Sbjct: 294 SAVVDGL 300
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 7/204 (3%)
Query: 250 DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRN 309
D+A + + R G T YN +LD LC + + A K+L M GV +
Sbjct: 27 DQAVEVFNRLPRFGCPQTTEVYNALLD---ALCANGN----FTGAYKLLRRMARKGVAPD 79
Query: 310 VETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
TF+ L+ + C + ++A M G P +L+ L +A + +
Sbjct: 80 RATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLEQAKAFAL 139
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHN 429
RM G + LC ++ A+S+ + G PD TY +++
Sbjct: 140 RMTKEGILPDVATFNSLAEALCNAGDVDFAVSLLADASSRGLCPDISTYKVMLPAVAKVG 199
Query: 430 RVDKANALFDEAVRNGVEVKPKEY 453
++++A LF AV +G P Y
Sbjct: 200 KIEEAFRLFYAAVEDGHRPFPSLY 223
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M G+P + TF+ +IS+ R + A+++F R+ +GC + L+ +L
Sbjct: 1 MRGLGLPLSPTTFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGN 60
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+++ RM G A + + + C ++++A + + M G P DL
Sbjct: 61 FTGAYKLLRRMARKGVAPDRATFSTLVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDL 120
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGV 446
L+ +++A A + G+
Sbjct: 121 LVDGLVRAGHLEQAKAFALRMTKEGI 146
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 148/342 (43%), Gaps = 27/342 (7%)
Query: 154 LVDNKEVLG--PKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD+ + G P + + I+ L + L F ME+ G + D + ++ L
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISGL 229
Query: 210 CENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
+G + A +L++D +I P+ LI + +G L EA+ L +EM R
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 289
Query: 269 VAYNCILD--CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
YN +++ C+ C + D K G +V T+N LI+ CK +R
Sbjct: 290 FTYNSLINGFCIHG-CLGDAKYMFDLMVSK--------GCFPDVVTYNTLITGFCKSKRV 340
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
ED +KLF M G + T+ LI QA ++ ++ +RM G + Y
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 387 LTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
L LC +IE+A+ + E ++ + D TY++++ C +++ +A LF R GV
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 447 EVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQ 488
+ Y I + G R+ L + + RR+K+
Sbjct: 461 KPDAIAY----------ITMISGLCRKGLQREADKLCRRMKE 492
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 7/208 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+ G+C + EA L M GF V YN + ++ LC+ +D + A +V
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTV---INGLCKNRDL----NNALEVF 207
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME G+ + T+N LIS L R DA +L M + PN F LI + +
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E + M Y + C + A +F+ M + G PD TY
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ L+T +C RV+ LF E G+
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 38/242 (15%)
Query: 149 AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEK 208
IH L D K + C +V T + GF + KR +D ++L
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYN--TLITGFCKS-------KRVEDGMKL---- 346
Query: 209 LCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
CE Y + LV D + LI G+C GKL+ A+++ M G
Sbjct: 347 FCEMTY----QGLVGDAFTY--------NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLL---DMEYNGVPRNVETFNVLISNLCKIRR 325
V YN +LDC LC + + EK L+ D++ + + ++ T+N++I LC+ +
Sbjct: 395 VTYNILLDC---LCN-------NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 326 SEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYE 385
++A LF + G P+ ++ +I L + E D++ RMK G+ ++ Y E
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 386 FL 387
L
Sbjct: 505 TL 506
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G+C+ G L +AK + M G V YN + ++ C+ K R++ + K+
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL---ITGFCKSK---RVE-DGMKLF 347
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+M Y G+ + T+N LI C+ + A K+F RM + G P+ T+ +L+ L
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE-------------- 404
++ + M++ ++ + + Y + LC +++++A +F
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 405 ---------------------KMKTDGHNPDSETYD 419
+MK DG P YD
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%)
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
ME G+ ++ +F +LI C+ R A+ L +M + G P+ T L+ Q R
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
E ++D M G+ Y + LC + A+ VF M+ G D+ TY+
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 421 LMTKWCAHNRVDKANALFDEAVRNGVE 447
L++ R A L + V+ ++
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKID 251
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 87/208 (41%), Gaps = 9/208 (4%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
G D K + D +V T + I ++ R + F M G D +
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFT 361
Query: 202 LRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMY 260
++ C+ G + A+K+ + + PD ++L+ C +GK+++A + ++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 261 RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ ++ + YN I + LCR D + EA + + GV + + +IS L
Sbjct: 422 KSEMDVDIITYNII---IQGLCRT-DKLK---EAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTF 348
C+ +A KL RM E G P+E +
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIY 502
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 41/339 (12%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCE-- 211
+V N + +T S + +G+P + +GF +++ D + D L + C
Sbjct: 257 MVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSD---GVEPDGLEPDIATYCTLL 313
Query: 212 NGYASYAEKLVKDTA-------NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
GYA+ LV A N I PD + ++LI + GK+DEA + +M + G
Sbjct: 314 QGYATKG-ALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGL 372
Query: 265 ELGTVAYNCILDCVSKLCRKKDPF-----RLDS-----------------------EAEK 296
V Y ++ + K R +D +D AE+
Sbjct: 373 NPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 432
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY 356
++L+M G+ N FN +I + CK R ++ KLF M G P+ T+ LI
Sbjct: 433 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 492
Query: 357 QAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSE 416
A ++ E +++ M S G Y + C I R+ A+ +F++M++ G +PD
Sbjct: 493 LAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDII 552
Query: 417 TYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
TY++++ R A L+ +G +++ Y +
Sbjct: 553 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 591
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 19/297 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L ++GR + +FE+M D G ++ LC AE+L+ +
Sbjct: 378 TYGAVIGILCKSGRVEDAMLYFEQM-IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 436
Query: 225 TANEIFPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
D IC + +I C +G++ E+++L M R G + + Y+ ++D
Sbjct: 437 -----MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L K D EA K+L M G+ N T+ LI+ CKI R DA+ LF M
Sbjct: 492 C-LAGKMD------EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMES 544
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G P+ T+ ++++ L+Q R E+ R+ +G I Y L LC + +
Sbjct: 545 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 604
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A+ +F+ + ++ T+++++ R +A LF NG+ YR+
Sbjct: 605 ALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRL 661
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 8/245 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ G +EKL + PD LI G+C+ GK+DEA +L M G
Sbjct: 452 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG 511
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ TV Y +++ K+ R D L E ME +GV ++ T+N+++ L +
Sbjct: 512 LKPNTVTYRTLINGYCKISRMGDALVLFKE-------MESSGVSPDIITYNIILQGLFQT 564
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR+ A +L+ R+ E G +T+ +++ L + + M + + + +
Sbjct: 565 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 624
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ L + R +A +F ++G P+ TY L+ +++ + LF
Sbjct: 625 NIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 684
Query: 444 NGVEV 448
NG V
Sbjct: 685 NGCTV 689
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 123/291 (42%), Gaps = 12/291 (4%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
++D L S ID + GR + F+ M R G K D + +++ C G
Sbjct: 437 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAG 495
Query: 214 YASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A KL+ + + P+ LI G+C ++ +A L +EM G + YN
Sbjct: 496 KMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYN 555
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
IL + + R + A+++ + + +G + T+N+++ LCK + ++DA+++
Sbjct: 556 IILQGLFQT-------RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRM 608
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F + TF ++I +L + R GE ++ S G Y + G
Sbjct: 609 FQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 668
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN---ALFDE 440
+E+ +F M+ +G DS + ++ + + +A ++ DE
Sbjct: 669 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 719
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 52/298 (17%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI--FPDDKICDLLIKGWCVDGKLDE 251
GF+ + + +++ LC + S A +V E+ PD C +L+KG C + + E
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQE 176
Query: 252 AKRLAREMY---RGGFELGTVAYNCILD-------------------------------- 276
A L M GG V+Y +++
Sbjct: 177 ALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSS 236
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
++ LC+ + +A +VL M NGV N T+ ++ C + ++AI ++
Sbjct: 237 IIAALCKGQAM----DKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKV 292
Query: 337 GEWGCHPNE-----TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
G P+ T+ L++ + ++D M G D+Y + +C
Sbjct: 293 RSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGI---HPDHYVYNILIC 349
Query: 392 GIE---RIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
++++AM VF KM+ G NPD+ TY ++ C RV+ A F++ + G+
Sbjct: 350 AYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 407
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 12/235 (5%)
Query: 219 EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
+++VK+ + P+ LI G C +G++DEA + EM G E Y +
Sbjct: 257 DRMVKEGCD---PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP---I 310
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
+ LC + + EA +++ M+ G NV+T+ LIS L ++ + E AI L+++M +
Sbjct: 311 TALCAIEH----EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G PN T+ LI L R ++ M+ G + Y E + LC IE+
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
AM +FEKM G P TY+ L+ + V+ A L D NG E P E+
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE--PDEW 479
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 11/216 (5%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI G DGK+D A L + M G +YN +++ +SK ++ F SEAEK+
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK----ENRF---SEAEKIC 571
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M G+ NV T+ LI LC+ R++ A K+F+ M + C PN T+ LI L Q
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ E + RM G Y ++ LC R +A + + MK G PD E Y
Sbjct: 632 GKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIY 687
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
L+ C + VD A +F G ++ YR
Sbjct: 688 YSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 723
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 119/283 (42%), Gaps = 17/283 (6%)
Query: 158 KEVLGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA 215
KE L P T+ + I+ L GR + L F ME +G + + +++ LC G
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGSLANTQTYNEIIKGLCLGGDI 424
Query: 216 SYA----EKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAY 271
A EK++K P + LI G+ G ++ A RL M G E Y
Sbjct: 425 EKAMVLFEKMLKMGP---LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481
Query: 272 NCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIK 331
N ++ SK +L+S A +M G+ N ++ LI K + + A+
Sbjct: 482 NELVSGFSKW------GKLES-ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALS 534
Query: 332 LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLC 391
L RM E GC+PN ++ +I L + R E +++ D+M G Y + LC
Sbjct: 535 LLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLC 594
Query: 392 GIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
R + A +F M+ P+ TY L+ C + D+A
Sbjct: 595 RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 121/299 (40%), Gaps = 9/299 (3%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T ++ I+ L GR + L E M + G + + L + LC + A +LV
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEM-IEKGIEPTVYTYTLPITALCAIEHEEEAIELVAR 328
Query: 225 TANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
P+ + LI G GKL+ A L +M + G TV YN + +++LC
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL---INELCV 385
Query: 284 KKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHP 343
S A K+ ME +G N +T+N +I LC E A+ LF +M + G P
Sbjct: 386 GGRF----STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP 441
Query: 344 NETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
T+ LI V ++D MK G + Y E ++ ++E A F
Sbjct: 442 TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYF 501
Query: 404 EKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
++M G NP+ +Y L+ +VD A +L G + Y L K
Sbjct: 502 QEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 9/278 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T + I L R G+ +G + +M ++ G + + ++ +LC G S A K+
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKE-GLVPNTVTYNALINELCVGGRFSTALKIFH 397
Query: 224 -DTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
+ + + + +IKG C+ G +++A L +M + G V YN +++ L
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN--GYLT 455
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ + A ++L M+ NG + T+N L+S K + E A F M E G +
Sbjct: 456 KGNV-----NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
PN ++ LI + +V ++ RM+ G + Y + L R +A +
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+KM G P+ TY L+ C + R A +F +
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 608
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 183 LGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI---------FPDD 233
+ R+ RD F D +R+++ K C N + V D NEI + +
Sbjct: 112 ISMLNRLVRDRVFA-PADHIRILMIKACRN---EEEIRRVADFLNEISGMGFGFSLYSCN 167
Query: 234 KICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
+ L K V+G A+ L ++M G + + +N +++ +SK K R E
Sbjct: 168 TLLIQLAKFEMVEG----ARNLYKQMLNSGIQPSLLTFNTLINILSK----KGKVR---E 216
Query: 294 AEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
AE +L + + +V T+ LI C+ R + A +F RM + GC PN T+ LI
Sbjct: 217 AELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLIN 276
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
L RV E +M++ M G Y +T LC IE E+A+ + +MK G P
Sbjct: 277 GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRP 336
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ +TY L++ +++ A L+ + ++ G+
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K CR ++ R L ++ G ++ + N L+ L K E A L+ +M
Sbjct: 136 KACRNEEEIR---RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ TF LI L + +V E + ++ ++ + Y + C ++ A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
VF++M +G +P+S TY L+ C RVD+A + +E + G+E
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 113/261 (43%), Gaps = 13/261 (4%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P + + ID + G+ L +RME + G + +S V+ L + S AEK+
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRME-EMGCNPNVESYNAVINGLSKENRFSEAEKIC 571
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ + P+ LI G C +G+ A ++ +M + Y+ + + L
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL---IYGL 628
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
C++ EAE+ M G ++T++ L+S LC+ R +A +L M E G
Sbjct: 629 CQEGKA----DEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 680
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
P+ + L+ + + V ++ +++ G+ + Y + LC ++E+A +
Sbjct: 681 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 740
Query: 402 VFEKMKTDGHNPDSETYDLLM 422
+F+ M N D + +L+
Sbjct: 741 LFDNMLEKEWNADEIVWTVLV 761
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 22/267 (8%)
Query: 161 LGPKTLASCIDRLVRAGRPTQ-VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAE 219
L P+ A + +V + T+ V+ FF + + +K + N + S
Sbjct: 69 LSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNM------------NCFISMLN 116
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+LV+D P D I L+IK + ++ E+ GF + N +L ++
Sbjct: 117 RLVRDRV--FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLA 174
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
K F + A + M +G+ ++ TFN LI+ L K + +A + ++ ++
Sbjct: 175 K-------FEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQY 227
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
P+ T+ LI + + + DRM G Y + LC R+++A
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWC 426
+ + E+M G P TY L +T C
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALC 314
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 11/241 (4%)
Query: 143 RRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSL 202
R + + I D +V+ + T + ID L R GR F ME+ + +
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP-NLYTY 621
Query: 203 RLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRG 262
++ LC+ G A AE++ + P L+ G C G+ EA++L ++M
Sbjct: 622 SSLIYGLCQEGKADEAERMSEIGCE---PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKER 678
Query: 263 GFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCK 322
GF Y +L K +D A K+ +E G ++ + LI LCK
Sbjct: 679 GFCPDREIYYSLLIAHCK------NLEVD-HALKIFHSIEAKGFQLHLSIYRALICALCK 731
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+ E+A LF M E + +E + VL+ L + + +++ M+S + +
Sbjct: 732 AGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQT 791
Query: 383 Y 383
Y
Sbjct: 792 Y 792
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 115/285 (40%), Gaps = 16/285 (5%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV--- 222
+ +C+ RL A VLG ++ G + + +V LC G + A + V
Sbjct: 124 VINCLCRLSHAVFGFSVLGLMFKI----GVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHL 179
Query: 223 KDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
KD E D C + G C G A ++M L AY+ ++D LC
Sbjct: 180 KDMGYE--SDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVD---GLC 234
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ F EA + M G+ ++ T+N LI LC R ++A L M G
Sbjct: 235 KDGMVF----EALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIM 290
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
P+ TF V+ ++ + + M G Y + C + +++ AM V
Sbjct: 291 PDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEV 350
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
F+ M + G P+ TY L+ WC ++KA E V NG++
Sbjct: 351 FDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLD 395
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 21/288 (7%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + ++ L G Q + F + + +D G++ D + + LC+ G++S A +K
Sbjct: 155 TFNTIVNGLCVEGNVAQAIRFVDHL-KDMGYESDSYTCGAITNGLCKVGHSSAALSYLKK 213
Query: 225 TANEIFPDDKICDL-------LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
++K C+L ++ G C DG + EA L +M G + YNC++
Sbjct: 214 M------EEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHG 267
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ R K EA +L +M G+ +V+TFNV+ K A +F M
Sbjct: 268 LCNFDRWK-------EAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMV 320
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
G + T+ +I + ++ + E+ D M S G Y + C + +
Sbjct: 321 HMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMN 380
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
+AM +M +G +P+ T+ L+ C + A LF ++G
Sbjct: 381 KAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHG 428
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 126/331 (38%), Gaps = 30/331 (9%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+D L + G + L F +M G + D + ++ LC A L+ + +
Sbjct: 230 VDGLCKDGMVFEALNLFSQMTGK-GIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKG 288
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
I PD + +++ + G + AK + M G E V Y I+ L + KD
Sbjct: 289 IMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAM 348
Query: 289 RL----------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
+ ++A L +M NG+ NV T++ LI +
Sbjct: 349 EVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGV 408
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK + A +LF M + G PN T +++ L++ E + ++ + +
Sbjct: 409 CKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNI 468
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y L +C ++ A+ +F + + G D TY++++ C +D A L +
Sbjct: 469 IIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMK 528
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
NG Y V + L + + K K
Sbjct: 529 MEENGCPPNECTYNVFVQGLLRRYQISKSTK 559
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%)
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ A ++ M Y GV V T N++I+ LC++ + + M + G P+ TF +
Sbjct: 100 TTAISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTI 159
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
+ L V + +D +K GY LC + A+S +KM+
Sbjct: 160 VNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNC 219
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
N D Y ++ C V +A LF + G++
Sbjct: 220 NLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQ 255
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
GV +V T+N++I LCK +DA L +M E GC PNE T+ V ++ L + ++ +
Sbjct: 498 GVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKS 557
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVF 403
+ + MK G+ +FL + +A+ VF
Sbjct: 558 TKYLMFMKDKGFQ-ADATTTKFLINYFSANKENRALEVF 595
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 93/235 (39%), Gaps = 43/235 (18%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI GWC +++A EM G + V ++ + + +C+ P A+++
Sbjct: 369 LIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTL---IGGVCKAGKPV----AAKELF 421
Query: 299 LDMEYNGVPRNVETFNVLI-----------------------------------SNLCKI 323
L M +G N++T +++ +C
Sbjct: 422 LVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSS 481
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ DA++LF + G + T+ ++IK L + + + ++++ +M+ G + Y
Sbjct: 482 GKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTY 541
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
F+ L +I ++ MK G D+ T L+ + A N+ ++A +F
Sbjct: 542 NVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYFSA-NKENRALEVF 595
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 9/282 (3%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
LV +G L + RM G ++ + ++++ LC+ G A A K+ + + I P
Sbjct: 182 LVDSGVILLALALYNRMVAA-GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP 240
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ KI +L+ C GK+DEA +L M G V YN L + K+ R + F
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF--- 297
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
+ L+ ++ G ++ ++ LI L + RR ++ + M E P+ + ++
Sbjct: 298 ----QRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I+ +A R+ + +D MK G+ Y L LC +E+A ++ +M +
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
DS T +++ C VD+A +FDE +G + Y
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 42/251 (16%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P + + ++K G + A L M G YN ++D LC++ +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMD---GLCKQG----M 222
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
+A K+ +M G+ NV+ + VL+S+LC + ++A++L M + GC P+E T+
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY--------------------------- 383
+ L + RV E + + ++ G+A+G K Y
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342
Query: 384 -------YEFLTRLCG-IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + R C RIE A+S + MK G PD+ Y+ ++ C H +++A+
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402
Query: 436 ALFDEAVRNGV 446
L E ++N +
Sbjct: 403 TLRSEMLQNNL 413
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 34/295 (11%)
Query: 173 LVRAGRPTQVLGFFER--MERDYGFKRDKDSLRLVVEKLCE-----NGYASYAEKLVKDT 225
L + GR + F+R M +D GF +++ L + G+ Y L ++
Sbjct: 287 LCKVGRVNEA---FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN- 342
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
I PD + ++I+G G++++A M + GF T YN +L LC
Sbjct: 343 ---ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV---LCDHG 396
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
D R A + +M N + + T ++I LCK ++A+++F MGE GC P
Sbjct: 397 DLER----AHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTV 452
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMK-------------SAGYAIGKKDYYEFLTRLCG 392
T+ LI Y+ R+ E + +M+ A + + + +C
Sbjct: 453 MTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQ 512
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++ +A + + G PD TY+ L+ C +D A LF E G+
Sbjct: 513 SGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGIS 567
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 135/320 (42%), Gaps = 50/320 (15%)
Query: 176 AGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDK 234
AGR L F + M++ GF D V++ LC++G A L + N + D
Sbjct: 360 AGRIEDALSFLDVMKKK-GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418
Query: 235 ICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL---- 290
++I G C G +DEA ++ EM G + + YN ++D + R ++ L
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 291 --------------------DSE-----------------AEKVLLDMEYNGVPRNVETF 313
DSE A K+L + +GV +V T+
Sbjct: 479 EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTY 538
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
N LI+ LCK R + A++LF + G P+E T+ LI L +A R + + +
Sbjct: 539 NTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
+G + Y + LC ++++ QA++++ +N E+ L AH ++
Sbjct: 599 SGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN----AHKEIED 654
Query: 434 ANALFDEAVRNGVEVKPKEY 453
+ D+ VR +++ +EY
Sbjct: 655 GS--LDDGVRELIKID-QEY 671
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 39/186 (20%)
Query: 288 FRLDSEAEKVLLDMEYN----GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW---- 339
RL S A++ + D + G+P + F L++ R+ DA++ F RM E+
Sbjct: 111 LRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRP 170
Query: 340 -------------------------------GCHPNETTFLVLIKSLYQAARVGEGDEMI 368
GC PN T+ VL+ L + G+ +M
Sbjct: 171 TAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMF 230
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
D M G K Y L+ LC +I++A+ + MK G PD TY+ ++ C
Sbjct: 231 DEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKV 290
Query: 429 NRVDKA 434
RV++A
Sbjct: 291 GRVNEA 296
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 121/332 (36%), Gaps = 87/332 (26%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYG---FKR---------DKDSLRLVVEKLCEN 212
T + ID R GR + F +ME F R D +SLR +V +C++
Sbjct: 454 TYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQS 513
Query: 213 GYASYAEKLVKDTANE-IFPDDKICDLLIKGWC--------------------------- 244
G A KL++ + + PD + LI G C
Sbjct: 514 GQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITY 573
Query: 245 ---VDGKL-----DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR------------- 283
+DG L ++A L + + + G YN ++ LCR
Sbjct: 574 GTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM---RSLCRMKKLSQAINLWLD 630
Query: 284 ---KKDPFRLDSEA------------------EKVLLDMEYNGVPRNVETFNVLISNLCK 322
KK F ++SE E + +D EY + N + + + LC+
Sbjct: 631 YLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSN--PYTIWLIGLCQ 688
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKD 382
+RR++DA+++F+ + E+G +LI L + +++ S + +
Sbjct: 689 VRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPV 748
Query: 383 YYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
L LC R + A ++ +M G++ D
Sbjct: 749 GNRLLRWLCICYRRQDAQALAWRMHLVGYDMD 780
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P K C++L++ G+LD A+++ EM G V ++ + LCR + +
Sbjct: 178 PSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVM--IKALCRAGE---I 232
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D+ A +L ++E +G+ V T+NVL+ LC+ R E+A +L RM E P+ TF +
Sbjct: 233 DA-AFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGI 291
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
LI L + R GE D ++ M+ G + Y + + C +A+ +F++M + G
Sbjct: 292 LINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKG 351
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
TY+L+ C ++ A + DE + G+ V
Sbjct: 352 IKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTV 389
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 16/277 (5%)
Query: 175 RAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDK 234
R G ++ L F+ M G K+ + L+ + LC+ G +AE+++ + +
Sbjct: 333 REGHCSEALRLFDEMVSK-GIKQTVVTYNLIAKALCKEGEMEHAEQILDEM---LLAGMT 388
Query: 235 I-CDLL--IKGWCV--DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
+ C L + W + G+LD RL REM + C+ +LC++
Sbjct: 389 VHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTA---CIQELCKRGK--- 442
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
EA ++ + G+ N+ T N LI LC+ ++A K+ M + G + T+
Sbjct: 443 -HEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYN 501
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
++I+ +A+++ E ++ D M G+ + FL C + ++E + + ++MK++
Sbjct: 502 IMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSE 561
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G PD TY ++ +C V KAN E ++NG+
Sbjct: 562 GLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGL 598
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 8/256 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLD 250
D G + D+ + ++++ C+ A +L D F PD + ++ +C GK++
Sbjct: 490 DSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVE 549
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+ L +M G + V Y I+D C+ KD + A K L+++ NG+ N
Sbjct: 550 DILHLLDQMKSEGLKPDIVTYGTIID---GYCKAKDVHK----ANKYLIELIKNGLRPNA 602
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
+N LI + DAI + M G P T+ L+ + A V E E+ +
Sbjct: 603 VIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQ 662
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+G Y + C I +I++A+ F++M P+ TY LM +C
Sbjct: 663 CILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGN 722
Query: 431 VDKANALFDEAVRNGV 446
++A LFDE V +G+
Sbjct: 723 KEEAFKLFDEMVSSGI 738
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 123/328 (37%), Gaps = 66/328 (20%)
Query: 201 SLRLVVEKLCENGYASYAEKLVKDT--ANEIFPDDKICDLLIKGWCVDGKLDEAKRLARE 258
+ ++VE L G A K+ + N + PD ++IK C G++D A + E
Sbjct: 182 TCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAE 241
Query: 259 MYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDS-------------------------- 292
+ R G + V YN ++D + + R ++ F+L
Sbjct: 242 LERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQR 301
Query: 293 --EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
E + VL +ME G+ N +N LI C+ +A++LF M G T+ +
Sbjct: 302 FGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNL 361
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAI----------------GKKDYYEFLTR----- 389
+ K+L + + ++++D M AG + G+ D L R
Sbjct: 362 IAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVAR 421
Query: 390 ---------------LCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
LC + E+A ++ + G + T + L+ C N + +A
Sbjct: 422 FLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEA 481
Query: 435 NALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+ V +GVE Y + ++ K
Sbjct: 482 TKVLKAMVDSGVEFDRITYNIMIQFCCK 509
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 9/223 (4%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEK-LVKDTANEIFPDDKI 235
G+ +L ++M+ + G K D + +++ C+ A K L++ N + P+ I
Sbjct: 546 GKVEDILHLLDQMKSE-GLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVI 604
Query: 236 CDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAE 295
+ LI G+ +G + +A + M G + + YN ++ +C L EA+
Sbjct: 605 YNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLM---YWMCHAG----LVEEAK 657
Query: 296 KVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL 355
++ + V + ++I CKI + ++A+ F M PN+ T+ L+ +
Sbjct: 658 EIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAY 717
Query: 356 YQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
+ E ++ D M S+G Y ++ C ++ +++
Sbjct: 718 CKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDK 760
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 8/257 (3%)
Query: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDG 247
M + G D S +V LC+ G YA +LV+ P + + + L++G C G
Sbjct: 122 MTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHG 181
Query: 248 KLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVP 307
L+++ +L ++ R G ++ +L+ K R EA K+L + G
Sbjct: 182 NLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKE-------RGVDEAMKLLDGIIAKGGK 234
Query: 308 RNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEM 367
N+ ++NVL++ LCK R+E+AI+ F + G +PN + ++++SL R E +E+
Sbjct: 235 PNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANEL 294
Query: 368 IDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCA 427
+ M S + Y + L RI+ A V ++M P + T++ +++ C
Sbjct: 295 VAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCK 354
Query: 428 HNRVDKANALFDEAVRN 444
+ D D+ + +
Sbjct: 355 EGKADLVVKCLDQMIHH 371
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 7/210 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ C K+ +A R+ G +Y + V+ LC++ +
Sbjct: 95 PDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFL---VNNLCKRGNI--- 148
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A +++ ME NG P N T+N L+ LCK +++L ++ G PNE T
Sbjct: 149 -GYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSF 207
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+++ Y+ V E +++D + + G Y LT LC R E+A+ F + + G
Sbjct: 208 LLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKG 267
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
NP+ + ++++ C R ++AN L E
Sbjct: 268 FNPNVVSCNIILRSLCCEGRWEEANELVAE 297
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 9/246 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEA 252
G K + S +++ LC+ G A + +D ++ F P+ C+++++ C +G+ +EA
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEA 291
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
L EM V YN ++ ++ R + F +VL +M + T
Sbjct: 292 NELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAF-------QVLDEMMRASFQPSAAT 344
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
FN +IS+LCK +++ +K +M C+PN+ TF I L + RV +I +
Sbjct: 345 FNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNA-IAVLCEGGRVQRAFSIIQSLG 403
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ + Y ++ LC A + +M G PD TY L+ C +D
Sbjct: 404 NKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLD 463
Query: 433 KANALF 438
+A +F
Sbjct: 464 EALEIF 469
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 111/285 (38%), Gaps = 43/285 (15%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L + GR + + FF + GF + S +++ LC G A +LV + + E P
Sbjct: 247 LCKEGRTEEAIQFFRDLPSK-GFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSP 305
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
++LI G++ A ++ EM R F+ +N I +S LC++
Sbjct: 306 SLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPI---ISHLCKEGKA---- 358
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVL----------------------------------I 317
K L M ++ N TFN + I
Sbjct: 359 DLVVKCLDQMIHHCCNPNDGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVI 418
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
S+LC+ + A +L Y M + G P+ T+ LI+ L + E E+ ++ Y
Sbjct: 419 SSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYR 478
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
++ + C R + ++ +FE M G+ P+ TY +L+
Sbjct: 479 PILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILV 523
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%)
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ +LCK + + A ++ E G P+ ++ L+ +L + +G +++++M+ G
Sbjct: 103 LLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENG 162
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + LC + Q++ + +K+ G P+ T+ L+ VD+A
Sbjct: 163 CPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAM 222
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
L D + G + Y V
Sbjct: 223 KLLDGIIAKGGKPNLVSYNV 242
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 73/190 (38%), Gaps = 50/190 (26%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDK---DSLRLVVEKLCENGYASYAEKLVKDTA 226
I L GR + + + G K++ D R V+ LC G A +L+ +
Sbjct: 383 IAVLCEGGRVQRAFSIIQSL----GNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMI 438
Query: 227 NEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
F PD LI+G CV+G LDEA +
Sbjct: 439 QSGFVPDPYTYSSLIRGLCVEGMLDEALEI------------------------------ 468
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
FRL +E N + FN LI CK R++ ++++F M G PNE
Sbjct: 469 --FRL----------LEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNE 516
Query: 346 TTFLVLIKSL 355
TT+ +L++ +
Sbjct: 517 TTYTILVEGI 526
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 9/266 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
I L +AG+ + F M++ GF D + VV+ C++G A +++++ +
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQ-GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 494
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P ++ G +LDEA L E G EL V Y+ ++D K+ R
Sbjct: 495 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI---- 550
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
EA +L +M G+ NV T+N L+ L K +A+ F M E C PN T+
Sbjct: 551 ---DEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 607
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI L + + + M+ G Y ++ L + I A S+FE+ K
Sbjct: 608 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 667
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKA 434
+G PD+ +++ L+ NR +A
Sbjct: 668 NGGIPDAASFNALIEGMSNANRAMEA 693
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 134/334 (40%), Gaps = 34/334 (10%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
CID +AG FF ++ G K D S ++ LC+ G AE+L A
Sbjct: 121 CIDCFGKAGNVDMACKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 179
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
P + +I G+ G+ ++A +L + G V++N IL C+ K + +
Sbjct: 180 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 239
Query: 288 FRL---------------------------DSEAEKVLLDMEYNGVPRNVETFNVLISNL 320
L EA ++L +ME+ + N+ T N+++ L
Sbjct: 240 LSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 299
Query: 321 CKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGK 380
CK R+ E+A K+F + GC+P+ T+ LI L + +V E + ++M AG+
Sbjct: 300 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 359
Query: 381 KDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
Y + R E VF+++ G PD + M V+K +F++
Sbjct: 360 VVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 419
Query: 441 AVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRET 474
G + Y + L K G+ RET
Sbjct: 420 IRSYGFLPDVRSYSILIHGLTKA-----GQARET 448
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 146/369 (39%), Gaps = 35/369 (9%)
Query: 113 AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDR 172
+++ FN LT DE LS F +KD + T ID
Sbjct: 219 SVVSFNSILTCLGKKRKVDEALSLFEV---MKKDAEP------------NSSTYNIIIDM 263
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
L GR + + ME F + ++ ++V++LC+ A K+ + + P
Sbjct: 264 LCLGGRVEEAYRILDEMEHASLFP-NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 322
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
D LI G G++DEA RL +M G V Y ++ RK+D
Sbjct: 323 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED----- 377
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVL 351
KV ++ G ++ N + + K E +F + +G P+ ++ +L
Sbjct: 378 --GHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435
Query: 352 IKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGH 411
I L +A + E + MK G+A+ + Y + C ++ +A + E+MK
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 495
Query: 412 NPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY-----------RVDPRYL 460
P TY ++ +R+D+A LF+EA G+E+ Y R+D YL
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 555
Query: 461 KKPIAVKKG 469
+KKG
Sbjct: 556 ILEEMMKKG 564
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 137/325 (42%), Gaps = 12/325 (3%)
Query: 123 QNAN-FSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQ 181
NAN +T +FF GR++D + L+ L + +D + +AG +
Sbjct: 355 HNANPVVYTSLIRNFFIH--GRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 412
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFP-DDKICDLLI 240
FE + R YGF D S +++ L + G A + + F D + + ++
Sbjct: 413 GRMIFEDI-RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 471
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G+C GK+ +A + EM + Y I+D ++K+ R + + L EA+
Sbjct: 472 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS---- 527
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
G+ NV ++ LI K+ R ++A + M + G PN T+ L+ +L +A
Sbjct: 528 ---KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 584
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
+ E MK Y + LC +++ +A ++ M+ G P+ TY
Sbjct: 585 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 644
Query: 421 LMTKWCAHNRVDKANALFDEAVRNG 445
+++ + A +LF+ NG
Sbjct: 645 MISGLAKVGNITDAYSLFERFKANG 669
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 49/235 (20%)
Query: 247 GKLDEAKR------LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G L EA+R L R+M G+E+G + ++ +++ + D L E + L+
Sbjct: 53 GALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLE 112
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
++ +NV I K + A K F+ + G P++ ++ +I L +A R
Sbjct: 113 -------PDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 165
Query: 361 VGEGDEMIDRMKS--------------AGYAIGKK--DYYEFLTRL-------------- 390
+GE +E+ +M++ GY + D Y+ L RL
Sbjct: 166 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 225
Query: 391 ---C-GIER-IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
C G +R +++A+S+FE MK D P+S TY++++ C RV++A + DE
Sbjct: 226 ILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNIIIDMLCLGGRVEEAYRILDE 279
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%)
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L + L + RR +DA+ M P + + VLI +L +A R E++ +M+ G
Sbjct: 16 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y +G + + L ++ A+++ +++K PD Y++ + + VD A
Sbjct: 76 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135
Query: 436 ALFDEAVRNGVE 447
F E G++
Sbjct: 136 KFFHELKAQGLK 147
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLDEA 252
G D S +V LC G YA +LV +P + + L++G C+ G L ++
Sbjct: 127 GIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQS 186
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+L + + G Y+ +L+ K R EA K+L ++ G N+ +
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYK-------ERGADEASKLLDEIIAKGGKPNLVS 239
Query: 313 FNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
+NVL++ LCK R+EDA++LF + G PN ++ +L++SL R E + ++ M
Sbjct: 240 YNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMD 299
Query: 373 SAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD 432
+ Y + L R E A+ V E+M P + +Y+ ++ + C +VD
Sbjct: 300 GDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVD 359
Query: 433 KANALFDEAV 442
D+ +
Sbjct: 360 LVVKCLDQMM 369
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
PD L+ C K+ +A ++ M G +Y + VS LCRK +
Sbjct: 95 PDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFL---VSSLCRKGNV--- 148
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
A +++ ME G P N T+N L+ LC +++L R+ + G PN T+
Sbjct: 149 -GYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDG 410
L+++ Y+ E +++D + + G Y LT LC R E AM +F ++ + G
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG 267
Query: 411 HNPDSETYDLLMTKWCAHNRVDKANALFDE 440
+P+ +Y++L+ C R ++AN L E
Sbjct: 268 FSPNVVSYNILLRSLCNEGRWEEANVLLAE 297
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 10/270 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE- 228
+ L R G + ++ME +YG+ + + +V LC +G + + +L+ +
Sbjct: 139 VSSLCRKGNVGYAMQLVDKME-EYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 229 IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ L++ + DEA +L E+ G + V+YN +L + K R +D
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
+L E + G NV ++N+L+ +LC R E+A L M P+ T+
Sbjct: 258 QLFRE-------LPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTY 310
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKT 408
+LI SL R E+++ M A + Y + RLC +++ + ++M
Sbjct: 311 NILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMY 370
Query: 409 DGHNPDSETYDLLMTKWCAHNRVDKANALF 438
NP+ TY+ + T C V +A ++
Sbjct: 371 RHCNPNEGTYNAIAT-LCEEGMVQEAFSII 399
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 35/319 (10%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
LVD E G T + + LVR G TQ L +R+ + G + + ++E
Sbjct: 154 LVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQK-GLVPNAYTYSFLLEAA 212
Query: 210 CENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
+ A A KL+ + A P+ ++L+ G C +G+ ++A +L RE+ GF
Sbjct: 213 YKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNV 272
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSE----------------------------AEKVLLD 300
V+YN +L + R ++ L +E A +VL +
Sbjct: 273 VSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEE 332
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M ++N +I+ LCK R+ + +K +M C+PNE T+ I +L +
Sbjct: 333 MIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGM 391
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDL 420
V E +I + + + ++ Y +T LC A + +M G PDS TY
Sbjct: 392 VQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451
Query: 421 LMTKWCAHNRVDKANALFD 439
L+ C +++A +F
Sbjct: 452 LIRGLCMEGMLNEAIEIFS 470
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 44/303 (14%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFP 231
L + GR + F + GF + S +++ LC G A L+ + +E P
Sbjct: 247 LCKEGRTEDAMQLFRELPSK-GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSP 305
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
++LI + G+ + A + EM R F+ +YN I +++LC+ + ++D
Sbjct: 306 STVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPI---IARLCKDR---KVD 359
Query: 292 SEAEKVLLDMEYNGVPRNVETFN----------------------------------VLI 317
K L M Y N T+N ++I
Sbjct: 360 LVV-KCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVI 418
Query: 318 SNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
++LC+ + A +L Y M ++G P+ T+ LI+ L + E E+ M+
Sbjct: 419 TSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIK 477
Query: 378 IGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANAL 437
+ ++Y + C R + A+ VFE M G+ + TY +L+ +D A +
Sbjct: 478 LDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEV 537
Query: 438 FDE 440
E
Sbjct: 538 LRE 540
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%)
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
L+ +LCK + AIK+ M G P+ ++ L+ SL + VG +++D+M+ G
Sbjct: 103 LLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYG 162
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y Y + LC + Q++ + +++ G P++ TY L+ D+A+
Sbjct: 163 YPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAS 222
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
L DE + G + Y V
Sbjct: 223 KLLDEIIAKGGKPNLVSYNV 242
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 206 VEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGF 264
+ LCE G A +++ N + F + ++I C G A +L EM + GF
Sbjct: 383 IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGF 442
Query: 265 ELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIR 324
+ Y+ + + LC + + +EA ++ ME N + + E +N LI CK R
Sbjct: 443 TPDSFTYSSL---IRGLCMEG----MLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSR 494
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMK 372
R++ A+ +F M G NETT+ +L++ + + E++ ++
Sbjct: 495 RTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 542
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 128/314 (40%), Gaps = 44/314 (14%)
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKIC 236
+P + +GF ++M D G + D + +++ LC+NG ++ A K+ T + PD
Sbjct: 281 QPKEAIGFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATY 339
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
L++G+ G L E L M R G +N IL C K D EA
Sbjct: 340 CTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN-ILICAYAKQEKVD------EAML 392
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL- 355
V M +G+ NV T+ +I LCK +DA+ F +M + G PN + LI SL
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 356 ----------------------------------YQAARVGEGDEMIDRMKSAGYAIGKK 381
+ RV E +++ D M G
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + C ++++A + M + G PD TY+ L+ +C +R+D A ALF E
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572
Query: 442 VRNGVEVKPKEYRV 455
V +GV Y +
Sbjct: 573 VSSGVSPNIITYNI 586
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 133/320 (41%), Gaps = 30/320 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S +D L + GR T+ F+ M + G + D + +++ G L+
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKR-GLEPDIATYCTLLQGYATKGALVEMHALLDL 361
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N I PD + ++LI + K+DEA + +M + G V Y ++ + K
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 284 KKDP----------------------------FRLDSEAEKVLLDMEYNGVPRNVETFNV 315
D F +AE+++L+M G+ N FN
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I + CK R ++ KLF M G PN T+ LI A ++ E +++ M S G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + C + R++ A+++F++M + G +P+ TY++++ R A
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
L+ ++G +++ Y +
Sbjct: 602 ELYVGITKSGTQLELSTYNI 621
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 131/297 (44%), Gaps = 19/297 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L ++G + +FE+M D G + ++ LC AE+L+ +
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILE 466
Query: 225 TANEIFPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
D IC + +I C +G++ E+++L M R G + + Y+ ++D
Sbjct: 467 -----MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L K D EA K+L M G+ + T+N LI+ C++ R +DA+ LF M
Sbjct: 522 C-LAGKMD------EATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G PN T+ ++++ L+ R E+ + +G + Y L LC ++
Sbjct: 575 SGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDE 634
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A+ +F+ + ++ T+++++ R D+A LF NG+ YR+
Sbjct: 635 ALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 8/245 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ C+ G +EKL + P+ LI G+C+ GK+DEA +L M+ G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V YN +++ ++ R D L E M +GV N+ T+N+++ L
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKE-------MVSSGVSPNIITYNIILQGLFHT 594
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR+ A +L+ + + G +T+ +++ L + E M + + + +
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ L + R ++A +F ++G P+ TY L+ +++ + LF
Sbjct: 655 NIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMED 714
Query: 444 NGVEV 448
NG V
Sbjct: 715 NGCTV 719
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 12/259 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI--FPDDKICDLLIKGWCVDGKLDE 251
GF+ + + +++ LC + S A +V E+ PD C +L+KG C + + E
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQE 176
Query: 252 AKRLAREMY---RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
A L M GG V+Y +++ K + E +LD +
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE----MLDRR---ISP 229
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T++ +I+ LCK + + A+++ M + G PN T+ ++ + + E +
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M+S G Y + LC R +A +F+ M G PD TY L+ +
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Query: 429 NRVDKANALFDEAVRNGVE 447
+ + +AL D VRNG+
Sbjct: 350 GALVEMHALLDLMVRNGIH 368
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 12/291 (4%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
++D L S I + GR + F+ M R G K + + +++ C G
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR-IGVKPNVITYSTLIDGYCLAG 525
Query: 214 YASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
A KL+ + + PD + LI G+C ++D+A L +EM G + YN
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
IL + R + A+++ + + +G + T+N+++ LCK +++A+++
Sbjct: 586 IILQGLFHT-------RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
F + TF ++I +L + R E ++ S G Y + G
Sbjct: 639 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN---ALFDE 440
+E+ +F M+ +G DS + ++ + + +A ++ DE
Sbjct: 699 QGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 118/304 (38%), Gaps = 41/304 (13%)
Query: 171 DRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF 230
D L+R GR + YG R V + S ++ + A ++
Sbjct: 39 DELLRRGRGASI----------YGLNRALAD----VARHSPAAAVSRYNRMARAGAGKVT 84
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P +LI C G+LD + + GF + + + +L LC K R
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLL---KGLCADK---RT 138
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE---WGCHPNETT 347
+ VL M +V + +L+ LC RS++A++L + M + G P+ +
Sbjct: 139 SDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVS 198
Query: 348 FLVLIKSLYQAARVGEGD---------EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
+ +I ++ EGD EM+DR S Y + LC + +++
Sbjct: 199 YTTVINGFFK-----EGDSDKAYSTYHEMLDRRISPDVVT----YSSIIAALCKGQAMDK 249
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPR 458
AM V M +G P+ TY+ ++ +C+ + +A + +GVE Y
Sbjct: 250 AMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD 309
Query: 459 YLKK 462
YL K
Sbjct: 310 YLCK 313
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 140 YFGRRKDFKA--IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKR 197
Y RK KA +++ ++ T + ID L +AG+ + ++ M+++
Sbjct: 302 YLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIP 361
Query: 198 DKD-SLRLV---------------VEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLI 240
D D R+V V+ LC+ A L+K + E P+ + D LI
Sbjct: 362 DVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALI 421
Query: 241 KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300
G C GKLDEA+ + M G++ Y+ ++D +L + K RLD A KVL
Sbjct: 422 DGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLID---RLFKDK---RLDL-ALKVLSK 474
Query: 301 MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 360
M N NV + +I LCK+ ++++A KL M E GC+PN T+ +I ++ R
Sbjct: 475 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGR 534
Query: 361 VGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
V + E++ +M S G A Y + C +++A + E+MK
Sbjct: 535 VEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMK 581
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 14/258 (5%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAK 253
G++ D+ +L LC++G + E L E PD + +I G C +EA
Sbjct: 5 GYRMDEFTLGCFAHSLCKSG--KWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAM 62
Query: 254 RLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETF 313
M R L V IL C C K+ +++L M G + F
Sbjct: 63 DFLTRM-RASSCLPNVLTYRILLCG---CLNKEKL---GRCKRILSMMITEGCYPSPRIF 115
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE-----GDEMI 368
N L+ C+ A KL +M + GC P + +LI + + G+ ++
Sbjct: 116 NSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAY 175
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
M AG + K + F LCGI + E+A +V +M + G PD+ TY ++ C
Sbjct: 176 GEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNA 235
Query: 429 NRVDKANALFDEAVRNGV 446
++V+KA LF E RNG+
Sbjct: 236 SKVEKAFQLFQEMKRNGI 253
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 230 FPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFR 289
+P +I + L+ +C G A +L ++M + G + G V YN + + +C ++P +
Sbjct: 109 YPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNIL---IGGICSSEEPGK 165
Query: 290 --LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
LD AEK +M GV N + LC I + E A + M G P+ +T
Sbjct: 166 DVLDL-AEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTST 224
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +I L A++V + ++ MK G A Y + C IEQA + F++M+
Sbjct: 225 YSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEME 284
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
DG P+ TY L+ + +V KAN +++ + G
Sbjct: 285 RDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 126/312 (40%), Gaps = 42/312 (13%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID +AG Q +F+ MERD G + + ++ +Y + ANE+
Sbjct: 264 IDSFCKAGFIEQARNWFDEMERD-GCAPNVVTYTALIH--------AYLKSRKVSKANEV 314
Query: 230 F---------PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----------- 269
+ P+ LI G C GK+++A ++ + M + E+ V
Sbjct: 315 YEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGAS 374
Query: 270 ------AYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
Y ++D + K + K EA +L M G N ++ LI CK
Sbjct: 375 NEPNVFTYGALVDGLCKAYQVK-------EARDLLKSMSVEGCEPNHVVYDALIDGCCKA 427
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ ++A ++F M E G PN T+ LI L++ R+ +++ +M A Y
Sbjct: 428 GKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIY 487
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
E + LC + + ++A + M+ G NP+ TY ++ + RV+K L +
Sbjct: 488 TEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSS 547
Query: 444 NGVEVKPKEYRV 455
G YRV
Sbjct: 548 KGCAPNFVTYRV 559
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 18/289 (6%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L C+++ + GR ++L E Y R +SL V C +G +YA KL+K
Sbjct: 84 LCGCLNK-EKLGRCKRILSMM-ITEGCYPSPRIFNSL---VHAYCRSGDYAYAYKLLKKM 138
Query: 226 AN-EIFPDDKICDLLIKGWCVD---GK--LDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
P + ++LI G C GK LD A++ EM G L V + C+
Sbjct: 139 VQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLC 198
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
+ + + +A V+ +M G + T++ +I LC + E A +LF M
Sbjct: 199 GIGKFE-------KAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRN 251
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
G P+ + LI S +A + + D M+ G A Y + ++ +A
Sbjct: 252 GIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKA 311
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
V+E M + G P+ TY L+ C +++KA+ ++ + VE+
Sbjct: 312 NEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEI 360
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 161/423 (38%), Gaps = 57/423 (13%)
Query: 65 RSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQN 124
RSLS LL + P P++ + + H P L +L P A+
Sbjct: 41 RSLSASLLAVAPSLPTPVADSVLKLLWHHAPRALLFFHSLLHLPPRAHAV---------- 90
Query: 125 ANFSHTDETLSFFTDYFGR----RKDFKAIHDFLVDNKEVLGPKTLASCIDRL-VRAGRP 179
TL D R R+ +I ++ P+T +RL V RP
Sbjct: 91 -----GPSTLDLALDLSARLRRPRQLTNSILGLFPRHRLAFTPRTFPILFERLAVSQRRP 145
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL 239
+ F + R + +D +++ L ++ +A A LV+ PD + L
Sbjct: 146 DLAVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTL 205
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC----------------VSKLCR 283
GWC A + R M G YN IL + K
Sbjct: 206 ADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGS 265
Query: 284 KKDPFRLD-----------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
K + + D +A KV +M G +V T+N LI +CK
Sbjct: 266 KDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNV 325
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
EDA+ +F M G PN T+ VLI+ L A ++ G ++++RMK+ G + Y
Sbjct: 326 EDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVL 385
Query: 387 LTRLCGIERIEQAMSVFEKM-KTDGHNPDSETYDLLMTKWCAHNRVDK---ANALFDEAV 442
+ L +E+ + +FEKM K + P+ +TY+++++ R + A + DE V
Sbjct: 386 IRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMV 445
Query: 443 RNG 445
G
Sbjct: 446 DRG 448
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 10/265 (3%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDE 251
+G D S +++ C NG S A L K ++ PD + +L++ C +++
Sbjct: 176 HGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNG 235
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVE 311
A L +M GF + Y +L+ LCRKK EA K+L M+ G ++
Sbjct: 236 AVDLFEDMLNKGFVPDSFTYTTLLN---SLCRKKKL----REAYKLLCRMKVKGCNPDIV 288
Query: 312 TFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
+N +I C+ R+ DA K+ M GC PN ++ L+ L + E + ++ M
Sbjct: 289 HYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEM 348
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
S G++ + + C + RIE+A V K P +T+ +++ + C +
Sbjct: 349 LSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDDG 408
Query: 432 DKANALFDEAVRNGVEVKPKEYRVD 456
K + + +E ++ +E+K VD
Sbjct: 409 VKIDGVLEEVLK--IEIKGDTRIVD 431
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%)
Query: 300 DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAA 359
D +GV + +++N+L+ C A LF +M + P+ ++ +L+++L + +
Sbjct: 172 DAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKS 231
Query: 360 RVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419
+V ++ + M + G+ Y L LC +++ +A + +MK G NPD Y+
Sbjct: 232 QVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 291
Query: 420 LLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYR 454
++ +C R A + D+ NG YR
Sbjct: 292 TVILGFCREGRAHDACKVIDDMQANGCLPNLVSYR 326
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%)
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
A LF + G P+ ++ +L+++ + + ++M + Y +
Sbjct: 166 AFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQ 225
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
LC ++ A+ +FE M G PDS TY L+ C ++ +A L
Sbjct: 226 ALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLL 275
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 25/289 (8%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYA---------SY 217
A +D L + GR T+ F+ + R G K + + + +GYA S+
Sbjct: 276 AVLLDYLCKNGRCTEARNIFDSLIRK-GIKP-----HVTIYGILLHGYATEGALSEMHSF 329
Query: 218 AEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
+ +V+ N + PD I +++ + +DEA + +M + G V Y ++D
Sbjct: 330 LDLMVR---NGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDA 386
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
+ KL R D ++ M GV ++ F+ L+ LC + + E A KLF+ +
Sbjct: 387 LCKLGRVDDAVLKFNQ-------MINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439
Query: 338 EWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIE 397
+ G N F +L+ +L + RV E +ID M Y + C RI+
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRID 499
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+A + + M + G PD TY+ L+ +C R+D A +LF E + G+
Sbjct: 500 EAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 23/277 (8%)
Query: 182 VLGFFERMERDYGFKRDKDSLRLVVEKLC-------ENGYASYAEKLVKDTANEIFPDDK 234
V+ F RM R+ K S + C ++G+A++ L+ T + +
Sbjct: 73 VVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFG--LILKTGWSL-NNTV 129
Query: 235 ICDLLIKGWCVDGKLDEAKR-LAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSE 293
I L+KG C ++DEA L R M G L ++YN +L LC +K E
Sbjct: 130 IFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILL---KGLCNEKRA----EE 182
Query: 294 AEKVLLDMEYNG----VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
A +++ M +G P NV T+ +I LCK + + A +F M + G PN T+
Sbjct: 183 ALELMHMMADDGDGSHTP-NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYT 241
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI + E +M+ M + G Y L LC R +A ++F+ +
Sbjct: 242 CLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRK 301
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
G P Y +L+ + + + ++ D VRNGV
Sbjct: 302 GIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGV 338
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 8/235 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ LC+ G A NE + PD + L+ G C K ++A++L E+ G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG 442
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
L +N IL C LCR+ EA++++ M V +V ++N L+ C
Sbjct: 443 IRLNAAFFN-ILMC--NLCREGRVM----EAQRLIDLMLRVDVRPDVISYNTLVDGHCLT 495
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
R ++A KL M G P+E T+ L+ +A R+ + + M G G Y
Sbjct: 496 GRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTY 555
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALF 438
L L I R +A ++ M + D TY +++ C +N VD+A +F
Sbjct: 556 NTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMF 610
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 107/252 (42%), Gaps = 8/252 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
V++ LC+ A+ + + ++ + P++ LI G+ GK E ++ +EM G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG 267
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V Y +LD + K R +EA + + G+ +V + +L+
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRC-------TEARNIFDSLIRKGIKPHVTIYGILLHGYATE 320
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
+ M G P+ F ++ + + A + E + D+M+ + G +Y
Sbjct: 321 GALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNY 380
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC + R++ A+ F +M +G PD + L+ C ++ +KA LF E +
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLD 440
Query: 444 NGVEVKPKEYRV 455
G+ + + +
Sbjct: 441 QGIRLNAAFFNI 452
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 38/238 (15%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFP 231
L R GR + + M R + D S +V+ C G A KL+ + + P
Sbjct: 457 LCREGRVMEAQRLIDLMLR-VDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKP 515
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC---VSKLCRKKDPF 288
D+ + L+ G+C ++D+A L REM G G V YN IL + + C K+ +
Sbjct: 516 DEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELY 575
Query: 289 --------RLDSEAEKVLLDMEYNGVPRN---------------------VETFNVLISN 319
+ D ++L NG+ RN + T N++I
Sbjct: 576 LNMINNRRKCDIYTYTIIL----NGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGA 631
Query: 320 LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA 377
L K R EDA+ LF + +G P+ T+ ++ ++L + + E DE+ M+ G A
Sbjct: 632 LLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTA 689
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 268 TVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSE 327
+ Y ++ C ++ R K F A ++L ++ N F L+ LC +R +
Sbjct: 92 SCTYTILIGCFCRMGRLKHGF----AAFGLILKTGWS--LNNTVIFGQLLKGLCDAKRVD 145
Query: 328 DAIK-LFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG---YAIGKKDY 383
+A L RM E+GC N ++ +L+K L R E E++ M G + Y
Sbjct: 146 EATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTY 205
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVR 443
+ LC + +++A VF+ M G P++ TY L+ + + + + + E
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMST 265
Query: 444 NGVEVKPKEYRVDPRYLKK 462
+G++ Y V YL K
Sbjct: 266 HGLQPDCVIYAVLLDYLCK 284
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 18/294 (6%)
Query: 166 LASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT 225
L SC L + G+ ++R+ + D+ S ++ LC+ A + +
Sbjct: 113 LVSC---LCKNGKVDAAYELYKRLSDECSL--DRISYNMLTYGLCKADQIDRALAVFGEM 167
Query: 226 A-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV----AYNCILDCVSK 280
N + P + L+ G+C G++++A L EM G V +YN + +S
Sbjct: 168 EENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTV---ISG 224
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
C+ R A VL M +G NV TFN L+ LC + ++A +F M E
Sbjct: 225 FCKA----RQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERN 280
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
C P T+ VLI +A R+ + ++ M G Y + LC ++E A+
Sbjct: 281 CEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDAL 340
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRN-GVEVKPKEY 453
+ ++M + G P+ TY ++ C ++++A LF++A+ + + KP Y
Sbjct: 341 EILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSY 394
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 32/294 (10%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWC 244
F+ R F+ + + L + G+ S A K+ D E P+ ++++G C
Sbjct: 24 FKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLC 83
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK----------LCRKKDPFRLD--- 291
D K D A L ++M T N ++ C+ K R D LD
Sbjct: 84 DDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRIS 143
Query: 292 --------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM- 336
A V +ME N V ++ T+N L+ C+ R E A+ L M
Sbjct: 144 YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMI 203
Query: 337 -GEWGCH--PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
G+ G P+ ++ +I +A ++ ++ RM +G + + L LC
Sbjct: 204 EGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLT 263
Query: 394 ERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
++++A ++FE M P + TY +L+T R+DKAN F + +R GVE
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVE 317
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 115/285 (40%), Gaps = 14/285 (4%)
Query: 175 RAGRPTQVLGFFERM---ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IF 230
RAGR Q + E M ++ D S V+ C+ A +++
Sbjct: 188 RAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCS 247
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P+ + L+ G C+ GKLDEA + M E V Y ++ ++ R+
Sbjct: 248 PNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHAR------ALRI 301
Query: 291 DSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLV 350
D +A +DM GV NV T+ LI LC + EDA+++ RM G PN T+
Sbjct: 302 D-KANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTR 360
Query: 351 LIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT---RLCGIERIEQAMSVFEKMK 407
+I +L + ++ ++ + + A K D Y + T LC + +A F +M
Sbjct: 361 VIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMV 420
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKE 452
Y + +K + EA +G+E++ K+
Sbjct: 421 ESKLVAKPHIYKAMADGLELVQETEKVERVCLEASAHGIELQQKD 465
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 37/267 (13%)
Query: 204 LVVEKLCENGYASYAEKLVKDTANEIFPDDKIC--DLLIKGWCVDGKLDEAKRLAREMYR 261
++++KLC +G + AE++V+ + P I + ++ G+C G +D A+R+ +
Sbjct: 101 ILIKKLCADGRVADAERVVE----ALGPSATIITYNTMVNGYCRAGNIDAARRMIDSV-- 154
Query: 262 GGFELGTVAYN----------CILDCVS----KLCRKKDP------FRLDSEAEK----- 296
F T YN C+LD ++ L R P LD+ ++
Sbjct: 155 -PFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQ 213
Query: 297 --VLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
VLLD M G ++ T+NVLI+ +C +A+K+ + +GC P+ T+ ++K
Sbjct: 214 AVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLK 273
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
SL + R E D+++ +M S A + + +T LC + +A V +M G P
Sbjct: 274 SLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTP 333
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDE 440
D TY +M C RVD+A L E
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKE 360
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 15/260 (5%)
Query: 193 YGFKRDKDSLRLVVEKLCENGYASYAEKLV-KDTANEIFPDDKICDLLIKGWCVDGKLDE 251
YG K D + V++ LC + A+KL+ K +N+ PD+ + +I C G +
Sbjct: 259 YGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGR 318
Query: 252 AKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDM-----EYNGV 306
A ++ +M G + Y+ I+D LC+++ R+D EA K+L ++ N +
Sbjct: 319 ATKVLAQMSEHGCTPDIITYSSIMD---GLCKER---RVD-EAIKLLKELLAEMVSKNCI 371
Query: 307 PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS-LYQAARVGEGD 365
P V TFN +I++LC+ + AIK+ M E GC P+ TT+ ++ L ++ + E
Sbjct: 372 PDQV-TFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEAL 430
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++++ M S G Y L + +E+A+ +F +++ G +PD Y+ ++
Sbjct: 431 DLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGL 490
Query: 426 CAHNRVDKANALFDEAVRNG 445
C R D A F V NG
Sbjct: 491 CKKWRTDLAIDFFAYMVSNG 510
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 123/296 (41%), Gaps = 20/296 (6%)
Query: 159 EVLGPK----TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGY 214
E LGP T + ++ RAG + RM F D + ++ LC G
Sbjct: 120 EALGPSATIITYNTMVNGYCRAGN----IDAARRMIDSVPFAPDTFTYNPLIRALCVRGC 175
Query: 215 ASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNC 273
A + D + P +L+ C + +A L EM G E V YN
Sbjct: 176 VLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNV 235
Query: 274 ILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF 333
+ ++ +C + D EA KVL + G + T+ ++ +LC R E+A KL
Sbjct: 236 L---INAMCSQGDV----GEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLL 288
Query: 334 YRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGI 393
+M C P+E TF +I SL Q VG +++ +M G Y + LC
Sbjct: 289 TKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKE 348
Query: 394 ERIEQAMSVFE----KMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
R+++A+ + + +M + PD T++ ++T C D+A + DE +G
Sbjct: 349 RRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHG 404
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 198 DKDSLRLVVEKLCENGYASYAEK-LVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D+ + V+ LC+ G+ A K L + + + PD ++ G C + ++DEA +L
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358
Query: 257 REMYRGGFELGTVAYNCILD------CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
+E+ V+ NCI D ++ LC+K L A KV+ +M +G ++
Sbjct: 359 KELLAE-----MVSKNCIPDQVTFNTIITSLCQKG----LFDRAIKVVDEMSEHGCIPDI 409
Query: 311 ETFNVLISN-LCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMID 369
T+N ++ LCK ++E+A+ L M G P+ TT+ L L + + M
Sbjct: 410 TTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFR 469
Query: 370 RMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLM 422
R+++ G + K Y L LC R + A+ F M ++G PD TY +L+
Sbjct: 470 RVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILV 522
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 38/229 (16%)
Query: 177 GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI-----FP 231
GR T+VL ++G D + +++ LC+ A KL+K+ E+ P
Sbjct: 317 GRATKVLAQMS----EHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIP 372
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC-VSKLCRKKDPFRL 290
D + +I C G D A ++ EM G YNCI+D + K C+ ++ L
Sbjct: 373 DQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDL 432
Query: 291 -----------DSEAEKVLL-------DMEYN-GVPRNVET---------FNVLISNLCK 322
D+ K L +ME G+ R V+ +N ++ LCK
Sbjct: 433 LNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCK 492
Query: 323 IRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRM 371
R++ AI F M GC P+E+T+++L++ + + E E++ +
Sbjct: 493 KWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNET--TFLVLIKSLYQAARVGEGDEMIDRM 371
N+LI LC R DA ++ +G P+ T T+ ++ +A + MID
Sbjct: 100 NILIKKLCADGRVADAERVVEALG-----PSATIITYNTMVNGYCRAGNIDAARRMID-- 152
Query: 372 KSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRV 431
S +A Y + LC + A++VF+ M G +P TY +L+ C +
Sbjct: 153 -SVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGY 211
Query: 432 DKANALFDEAVRNGVEVKPKEYRV 455
+A L DE G E Y V
Sbjct: 212 KQAVVLLDEMRSKGCEPDIVTYNV 235
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 10/294 (3%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLA 256
D + ++V+ C+NG +L++ PD +I G+C +G +DEA L
Sbjct: 327 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 386
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+ M G + T++Y +L LCR + +A++++ M G N TFN L
Sbjct: 387 KNMSACGCKPNTISYTIVL---KGLCRAERWV----DAQELISHMIQQGCLPNPVTFNTL 439
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGY 376
I+ +CK +E AI+L +M GC P+ ++ +I L +A + E E+++ M + G
Sbjct: 440 INFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 499
Query: 377 AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANA 436
Y + L R ++ + +F+ ++ D+ Y+ +++ C D+A
Sbjct: 500 TPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAID 559
Query: 437 LFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKKRETLPEKMARKRRRLKQIR 490
F V NG Y + R L V++ + + L E +R+ R +R
Sbjct: 560 FFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ--DLLSELCSRRAVRKHLVR 611
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 120/256 (46%), Gaps = 8/256 (3%)
Query: 192 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKIC-DLLIKGWCVDGKLD 250
++G D +++ +C++G+ A ++ + + +C + ++KG C + +
Sbjct: 251 EHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWE 310
Query: 251 EAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNV 310
EA+ L EM++ L V +N ++D C+ R+ E++L E+ +P +V
Sbjct: 311 EAEDLLAEMFQEDCPLDDVTFNILVD---FFCQNGLVDRVIELLEQML---EHGCIP-DV 363
Query: 311 ETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDR 370
T+ +I+ CK ++A+ L M GC PN ++ +++K L +A R + E+I
Sbjct: 364 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 423
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
M G + + +C EQA+ + ++M +G +PD +Y ++ +
Sbjct: 424 MIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 483
Query: 431 VDKANALFDEAVRNGV 446
++A L + + G+
Sbjct: 484 TEEALELLNVMINKGI 499
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 12/277 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEA 252
G D + LVV +CE G +L++ + PD + ++KG C+ + D+
Sbjct: 173 GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232
Query: 253 KRLAREMYRGGFELGTV-AYNCILD------CVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
+ L EM R L + + C D + +C+ A +L M G
Sbjct: 233 EELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGH----HEVANDILSRMPSYG 288
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ NV +N ++ LC R E+A L M + C ++ TF +L+ Q V
Sbjct: 289 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 348
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
E++++M G Y + C +++A+ + + M G P++ +Y +++
Sbjct: 349 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 408
Query: 426 CAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
C R A L ++ G P + ++ K
Sbjct: 409 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK 445
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 13/205 (6%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI+ C G+ +A AR + G G VAYN + ++ CR A V
Sbjct: 50 LIRSLCAAGRTADA---ARALDTAGDAAGVVAYNAM---IAGYCRAGQVAAARRLAAAV- 102
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
VP N T+ ++ +LC DA+ + M GC V++++ +
Sbjct: 103 ------PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRG 156
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ + + G + + ++ +C +++ + + K+ + G PD +Y
Sbjct: 157 GGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSY 216
Query: 419 DLLMTKWCAHNRVDKANALFDEAVR 443
+ ++ C R D L E VR
Sbjct: 217 NAVLKGLCMAKRWDDVEELMVEMVR 241
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 161/423 (38%), Gaps = 57/423 (13%)
Query: 65 RSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQN 124
RSLS LL + P P++ + + H P L +L P A+
Sbjct: 41 RSLSASLLAVAPSLPTPVADSVLKLLWHHAPRALLFFHSLLHLPPRAHAV---------- 90
Query: 125 ANFSHTDETLSFFTDYFGR----RKDFKAIHDFLVDNKEVLGPKTLASCIDRL-VRAGRP 179
TL D R R+ +I ++ P+T +RL V RP
Sbjct: 91 -----GPSTLDLALDLSARLRRPRQLTNSILGLFPRHRLAFTPRTFPILFERLAVSQRRP 145
Query: 180 TQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLL 239
+ F + R + +D +++ L ++ +A A LV+ PD + L
Sbjct: 146 DLAVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTL 205
Query: 240 IKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC----------------VSKLCR 283
GWC A + R M G YN IL + K
Sbjct: 206 ADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGS 265
Query: 284 KKDPFRLD-----------------SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRS 326
K + + D +A KV +M G +V T+N LI +CK
Sbjct: 266 KDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNV 325
Query: 327 EDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF 386
EDA+ +F M G PN T+ VLI+ L A ++ G ++++RMK+ G + Y
Sbjct: 326 EDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVL 385
Query: 387 LTRLCGIERIEQAMSVFEKM-KTDGHNPDSETYDLLMTKWCAHNRVDK---ANALFDEAV 442
+ L +E+ + +FEKM K + P+ +TY+++++ R + A + +E V
Sbjct: 386 IRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMV 445
Query: 443 RNG 445
G
Sbjct: 446 DRG 448
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 10/287 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P + I L + GR + FE M + G K + +++ +NG + A L
Sbjct: 330 PHAYSLVIGGLCKDGRTVEGSSVFENMNKK-GCKANVAIYTALIDAYGKNGNVNEAINLF 388
Query: 223 KDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ E F PDD +++ G C G+LDEA + + Y+ ++D + K
Sbjct: 389 ERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKA 448
Query: 282 CRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGC 341
R EAEK +M G P++ +N LI L K + E+A+ LF RM + GC
Sbjct: 449 GRV-------DEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGC 501
Query: 342 HPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMS 401
T+ +LI L++ R E ++ D M G + LC ++ +A
Sbjct: 502 DQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACK 561
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEV 448
+ +++ G P++ D++ C R ++A L D V G EV
Sbjct: 562 ILDELAPMGVIPETAFEDMI-NVLCKAGRTEQACKLADGIVDRGREV 607
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 143/357 (40%), Gaps = 16/357 (4%)
Query: 96 TPSLVQSTLNFSPEAGRAILGFNH--WLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDF 153
+P+ V L G+ + F W + N+ H E D DF +
Sbjct: 118 SPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCI 177
Query: 154 LVDNKEVLGPKTLASCIDRLVRA----GRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL 209
+ KE G + L+R+ G ++L + RM ++ G + + ++ L
Sbjct: 178 FGEFKEK-GFLMTVFAANSLIRSFGALGMVEELLWVWRRM-KESGIEPSLYTFNFLLNGL 235
Query: 210 CENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGT 268
+ + AE++ + +I PD + +IKG+C G +A +M + E
Sbjct: 236 VNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDK 295
Query: 269 VAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSED 328
+ Y ++ + C + F + +ME G+ ++++I LCK R+ +
Sbjct: 296 ITYLTLI----QACYSEGNF---DSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVE 348
Query: 329 AIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLT 388
+F M + GC N + LI + + V E + +RMK G+ Y +
Sbjct: 349 GSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVN 408
Query: 389 RLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
LC R+++A+ FE K + ++ Y L+ RVD+A F+E V G
Sbjct: 409 GLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERG 465
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 116/294 (39%), Gaps = 43/294 (14%)
Query: 198 DKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDL-LIKGWCVDGKLDEAKRLA 256
D S +++ C+ G A + D DKI L LI+ +G D L
Sbjct: 259 DVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLY 318
Query: 257 REMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVL 316
+EM G E+ AY+ + + LC+ E V +M G NV + L
Sbjct: 319 QEMEERGLEIPPHAYSLV---IGGLCKDGRTV----EGSSVFENMNKKGCKANVAIYTAL 371
Query: 317 ISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDE---------- 366
I K +AI LF RM G P++ T+ V++ L ++ R+ E E
Sbjct: 372 IDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEV 431
Query: 367 ---------MIDRMKSAGYAIGKKDYYE----------------FLTRLCGIERIEQAMS 401
+ID + AG + ++E + L ++E+A+
Sbjct: 432 AVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALV 491
Query: 402 VFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+F++M+ +G + TY +L++ +R ++A L+D + G+ +R
Sbjct: 492 LFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRA 545
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI+ + G ++E + R M G E +N +L+ + + ++S AE+V
Sbjct: 196 LIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLV------NSMFIES-AERVF 248
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
ME + +V ++N +I CK ++ A++ F M + P++ T+L LI++ Y
Sbjct: 249 EVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSE 308
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
+ M+ G I Y + LC R + SVFE M G + Y
Sbjct: 309 GNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIY 368
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
L+ + + V++A LF+ G E Y V
Sbjct: 369 TALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGV 405
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 58/151 (38%)
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
G V N LI + + E+ + ++ RM E G P+ TF L+ L + +
Sbjct: 185 GFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESA 244
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ + + M+ Y + C ++AM F M+ PD TY L+
Sbjct: 245 ERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQA 304
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+ D L+ E G+E+ P Y +
Sbjct: 305 CYSEGNFDSCLHLYQEMEERGLEIPPHAYSL 335
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 155/354 (43%), Gaps = 44/354 (12%)
Query: 135 SFFTDYF--GRRKDFKAIHDFLVD---NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
S ++F GR++D I++ ++ + ++L T C+ +AG + F+ +
Sbjct: 519 SLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV---FKAGEIEKGRALFQEI 575
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
++ GF D S +++ L + G+A A +L + D + + +I G+C GK
Sbjct: 576 -KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGK 634
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK------------ 296
+++A +L EM G E V Y ++D ++K+ R + + L EA+
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSS 694
Query: 297 ----------------VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
++ ++ G+ NV T+N L+ L K +A+ F M +
Sbjct: 695 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK 754
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IE 397
C PN T+ +LI L + + + M+ G+ K + + + T + G+ + I
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF---KPNVFTYTTMISGLAKAGNIV 811
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+A ++FEK K G DS Y+ ++ NR A LF+EA G + K
Sbjct: 812 EADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTK 865
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 36/320 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID L +AG+ L + M +D G + ++ ++V++LC+ A++L D A I
Sbjct: 416 IDMLCKAGKLETALVVRDAM-KDAGLFPNVITVNIMVDRLCK------AQRL--DDACSI 466
Query: 230 FP--DDKICD-------LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
F D K C LI+G G++DEA +L +M V Y ++ K
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
RK+D ++ +E ++ G ++ N + + K E LF + G
Sbjct: 527 CGRKEDGHKIYNEMLRL-------GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ ++ +LI L +A E E+ MK G + + Y + C ++ +A
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY------- 453
+ E+MKT GH P TY ++ +R+D+A LF+EA G+E+ Y
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 454 ----RVDPRYLKKPIAVKKG 469
R+D YL ++KG
Sbjct: 700 GKVGRIDEAYLIMEELMQKG 719
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 11/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT--AN 227
+DRL +A R FE ++ + D + ++E L +G A KL + AN
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHK-TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+I P+ + LI+ + G+ ++ ++ EM R G + N +DCV K +
Sbjct: 510 QI-PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG 568
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
L E + + G + ++ +LI L K + +A +LFY M E GC +
Sbjct: 569 RALFQEIKNL-------GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +I ++ +V + ++++ MK+ G+ Y + L I+R+++A +FE+ K
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ G + Y L+ + R+D+A + +E ++ G+
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 720
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
CID +AG+ F M+ + G D + ++ LC+ + A +L + N
Sbjct: 276 CIDCFGKAGKVDMAWKXFHEMKAN-GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ P + +I G+ + GK ++A L R G V+YNCIL C+ RK
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLG---RKGQV 391
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
EA K +M+ + +P N+ T+N++I LCK + E A+ + M + G PN T
Sbjct: 392 ----DEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+++ RLC +R++ A S+FE +
Sbjct: 447 VNIMVD-----------------------------------RLCKAQRLDDACSIFEGLD 471
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
PD+ TY L+ H RVD+A L+++
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 152/390 (38%), Gaps = 46/390 (11%)
Query: 65 RSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQN 124
R + + + LE P S L + P P LV L + A+ F W +
Sbjct: 65 RQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYF-RWAERL 123
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPKTLASCID---RLVRAGRPT 180
+ +H E + R + F + L + GP +CI+ +++ +
Sbjct: 124 TDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSN-NTCIEIVLSFIKSRKLR 182
Query: 181 QVLGFFERMERDYGFK----------------RDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ F + M R F+ RD D + + +++ E GYA
Sbjct: 183 EAFTFIQTM-RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTT- 240
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
LI+ + +G++D A L EM E V YN +DC K
Sbjct: 241 --------------LIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK---- 282
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
++D A K +M+ NG+ + T+ +I LCK R +A++LF M + P
Sbjct: 283 --AGKVDM-AWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ +I A + + +++R + G Y L+ L ++++A+ FE
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+MK D P+ TY++++ C +++ A
Sbjct: 400 EMKKDAI-PNLSTYNIMIDMLCKAGKLETA 428
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 9/216 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P + C ++ + KL EA + M + F AY ++ +S
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALST--------SR 214
Query: 291 DSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
DS+ L M+ G NV F LI + R + A+ L M P+ +
Sbjct: 215 DSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
V I +A +V + MK+ G + Y + LC +R+ +A+ +FE M +
Sbjct: 275 VCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P + Y+ ++ + + + A +L + R G
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI G C K ++A +EM + GF+ Y + +S L + + D+ EK
Sbjct: 764 ILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM---ISGLAKAGNIVEADTLFEKF 820
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY- 356
E GV + +N +I L R+ DA +LF GC T +VL+ SL+
Sbjct: 821 ---KEKGGVADSA-IYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHK 876
Query: 357 -----QAARVG 362
QAA VG
Sbjct: 877 AECIEQAAIVG 887
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Query: 295 EKVLLDMEYNGV-PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
E++L +M G P N +++S + K R+ +A M + P + + LI
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFI-KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIG 208
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+L + + +M+ GYA+ + + R++ A+S+ ++MK++ P
Sbjct: 209 ALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP 268
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
D Y++ + + +VD A F E NG+ + Y
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTY 308
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 155/354 (43%), Gaps = 44/354 (12%)
Query: 135 SFFTDYF--GRRKDFKAIHDFLVD---NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERM 189
S ++F GR++D I++ ++ + ++L T C+ +AG + F+ +
Sbjct: 519 SLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV---FKAGEIEKGRALFQEI 575
Query: 190 ERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGK 248
++ GF D S +++ L + G+A A +L + D + + +I G+C GK
Sbjct: 576 -KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGK 634
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK------------ 296
+++A +L EM G E V Y ++D ++K+ R + + L EA+
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSS 694
Query: 297 ----------------VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
++ ++ G+ NV T+N L+ L K +A+ F M +
Sbjct: 695 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK 754
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER---IE 397
C PN T+ +LI L + + + M+ G+ K + + + T + G+ + I
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF---KPNVFTYTTMISGLAKAGNIV 811
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPK 451
+A ++FEK K G DS Y+ ++ NR A LF+EA G + K
Sbjct: 812 EADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTK 865
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 36/320 (11%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
ID L +AG+ L + M +D G + ++ ++V++LC+ A++L D A I
Sbjct: 416 IDMLCKAGKLETALVVRDAM-KDAGLFPNVITVNIMVDRLCK------AQRL--DDACSI 466
Query: 230 FP--DDKICD-------LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
F D K C LI+G G++DEA +L +M V Y ++ K
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
RK+D ++ +E ++ G ++ N + + K E LF + G
Sbjct: 527 CGRKEDGHKIYNEMLRL-------GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ ++ +LI L +A E E+ MK G + + Y + C ++ +A
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 401 SVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY------- 453
+ E+MKT GH P TY ++ +R+D+A LF+EA G+E+ Y
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 454 ----RVDPRYLKKPIAVKKG 469
R+D YL ++KG
Sbjct: 700 GKVGRIDEAYLIMEELMQKG 719
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 45/273 (16%)
Query: 169 CIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT-AN 227
CID +AG+ FF M+ + G D + ++ LC+ + A +L + N
Sbjct: 276 CIDCFGKAGKVDMAWKFFHEMKAN-GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+ P + +I G+ + GK ++A L R G V+YNCIL C+ RK
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLG---RKGQV 391
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
EA K +M+ + +P N+ T+N++I LCK + E A+ + M + G PN T
Sbjct: 392 ----DEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+++ RLC +R++ A S+FE +
Sbjct: 447 VNIMVD-----------------------------------RLCKAQRLDDACSIFEGLD 471
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDE 440
PD+ TY L+ H RVD+A L+++
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 11/279 (3%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT--AN 227
+DRL +A R FE ++ + D + ++E L +G A KL + AN
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHK-TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509
Query: 228 EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDP 287
+I P+ + LI+ + G+ ++ ++ EM R G + N +DCV K +
Sbjct: 510 QI-PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG 568
Query: 288 FRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETT 347
L E + + G + ++ +LI L K + +A +LFY M E GC +
Sbjct: 569 RALFQEIKNL-------GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Query: 348 FLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK 407
+ +I ++ +V + ++++ MK+ G+ Y + L I+R+++A +FE+ K
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 408 TDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
+ G + Y L+ + R+D+A + +E ++ G+
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 720
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 152/390 (38%), Gaps = 46/390 (11%)
Query: 65 RSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQN 124
R + + + LE P S L + P P LV L + A+ + W +
Sbjct: 65 RQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAV-NYFRWAERL 123
Query: 125 ANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEV-LGPKTLASCID---RLVRAGRPT 180
+ +H E + R + F + L + GP +CI+ +++ +
Sbjct: 124 TDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSN-NTCIEIVLSFIKSRKLR 182
Query: 181 QVLGFFERMERDYGFK----------------RDKDSLRLVVEKLCENGYASYAEKLVKD 224
+ F + M R F+ RD D + + +++ E GYA
Sbjct: 183 EAFTFIQTM-RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTT- 240
Query: 225 TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRK 284
LI+ + +G++D A L EM E V YN +DC K
Sbjct: 241 --------------LIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK---- 282
Query: 285 KDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPN 344
++D A K +M+ NG+ + T+ +I LCK R +A++LF M + P
Sbjct: 283 --AGKVDM-AWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 345 ETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFE 404
+ +I A + + +++R + G Y L+ L ++++A+ FE
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399
Query: 405 KMKTDGHNPDSETYDLLMTKWCAHNRVDKA 434
+MK D P+ TY++++ C +++ A
Sbjct: 400 EMKKDAI-PNLSTYNIMIDMLCKAGKLETA 428
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 9/216 (4%)
Query: 231 PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRL 290
P + C ++ + KL EA + M + F AY ++ +S
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALST--------SR 214
Query: 291 DSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
DS+ L M+ G NV F LI + R + A+ L M P+ +
Sbjct: 215 DSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
V I +A +V + MK+ G + Y + LC +R+ +A+ +FE M +
Sbjct: 275 VCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
P + Y+ ++ + + + A +L + R G
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+LI G C K ++A +EM + GF+ Y + +S L + + D+ EK
Sbjct: 764 ILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM---ISGLAKAGNIVEADTLFEKF 820
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLY- 356
E GV + +N +I L R+ DA +LF GC T +VL+ SL+
Sbjct: 821 ---KEKGGVADSA-IYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHK 876
Query: 357 -----QAARVG 362
QAA VG
Sbjct: 877 AECIEQAAIVG 887
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Query: 295 EKVLLDMEYNGV-PRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIK 353
E++L +M G P N +++S + K R+ +A M + P + + LI
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFI-KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIG 208
Query: 354 SLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNP 413
+L + + +M+ GYA+ + + R++ A+S+ ++MK++ P
Sbjct: 209 ALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP 268
Query: 414 DSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
D Y++ + + +VD A F E NG+ + Y
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTY 308
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 9/261 (3%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
G T + I+ L +AG+ + +R+ D G + S +V++ LC+ A ++
Sbjct: 438 GFSTYLTLIEALYKAGKMEIGNRYMDRLIND-GLISNIYSYNMVIDCLCKGKSMDRASEM 496
Query: 222 VKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSK 280
+D N I P+ + LI G+C +G +D+A+ L + F +N ++D + +
Sbjct: 497 FRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQ 556
Query: 281 LCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG 340
+ ++ F +E +E++ VP NV T+N+LI + C I + L +M G
Sbjct: 557 AHKHENAFGCFTEM------VEWD-VPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHG 609
Query: 341 CHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM 400
P+ +F LI+ R + +++ D M G Y + LC R ++A
Sbjct: 610 IQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAR 669
Query: 401 SVFEKMKTDGHNPDSETYDLL 421
+F MK +G PDS T L
Sbjct: 670 EIFLSMKENGCTPDSYTCSLF 690
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 12/230 (5%)
Query: 217 YAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCIL 275
Y ++L+ D + I+ + + D L KG +D A + R+++ G V YN +
Sbjct: 461 YMDRLINDGLISNIYSYNMVIDCLCKG----KSMDRASEMFRDLHNRGISPNIVTYNTL- 515
Query: 276 DCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYR 335
+ CR + +D E + + +E P ++ TFN LI LC+ + E+A F
Sbjct: 516 --IGGFCRNGN---MDKAQELLEMLLESRFRP-DIFTFNSLIDGLCQAHKHENAFGCFTE 569
Query: 336 MGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIER 395
M EW PN T+ +LI S V ++ +MK G + + G R
Sbjct: 570 MVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNR 629
Query: 396 IEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNG 445
++A +F+ M G PD+ TY L+ C R DKA +F NG
Sbjct: 630 FQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENG 679
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%)
Query: 290 LDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFL 349
+ SEA L+ G + TFN+ ++ + K + +F + G P +T+L
Sbjct: 384 MASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYL 443
Query: 350 VLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTD 409
LI++LY+A ++ G+ +DR+ + G Y + LC + +++A +F +
Sbjct: 444 TLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNR 503
Query: 410 GHNPDSETYDLLMTKWCAHNRVDKANALFD 439
G +P+ TY+ L+ +C + +DKA L +
Sbjct: 504 GISPNIVTYNTLIGGFCRNGNMDKAQELLE 533
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 68/144 (47%)
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G+ N+ ++N++I LCK + + A ++F + G PN T+ LI + + +
Sbjct: 468 DGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDK 527
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMT 423
E+++ + + + + + LC + E A F +M P+ TY++L+
Sbjct: 528 AQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILIC 587
Query: 424 KWCAHNRVDKANALFDEAVRNGVE 447
+CA V ++ L + +G++
Sbjct: 588 SFCAIGDVSRSTHLLRQMKLHGIQ 611
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 46/247 (18%)
Query: 238 LLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKV 297
+L W G + + ++ G T YN ++D + K LD K
Sbjct: 199 ILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIK------SNSLDLAYLKF 252
Query: 298 LLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQ 357
+N VP T+N+LI +C++ ++A++L +M G PN T+ +LI +
Sbjct: 253 QQMSSHNCVPDRF-TYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFN 311
Query: 358 AARVGEGDEMIDRMKSAGYAIGKKD--------------------YYEFLTRLCGIERI- 396
A R GE +++ MK + EF+ R GI ++
Sbjct: 312 AKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLV 371
Query: 397 --------------EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVD--KANALFDE 440
+A+ K +G+ P S T+++ T C ++D +FD
Sbjct: 372 CDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNI--TLACVLKKLDLKVTCTVFDN 429
Query: 441 AVRNGVE 447
V++GV+
Sbjct: 430 CVQSGVK 436
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 200/501 (39%), Gaps = 51/501 (10%)
Query: 2 PPSTSLL---LGRL-------------LLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPF 45
PPS SLL L R L P +S ++ S L +++ F
Sbjct: 95 PPSASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELF 154
Query: 46 SSKPTSNPKTIDDPDQVIARSLSGELLE-NLEADPLPISQRLHLIFSHVTPTPSLVQSTL 104
+S ++ K PD V L L + L D L + R+ S V ++ + +
Sbjct: 155 TSMREASVK----PDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVV 210
Query: 105 NFSPEAGR---AILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD-NKEV 160
+ + GR AI+ + + Q + T + D R D + KE
Sbjct: 211 DGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEG 270
Query: 161 LGPK--TLASCIDRLVRAGRPTQVLGFFERMERDYGFKR-DKDSLRLVVEKLCENGYASY 217
+ P T+ + + L R GR L FF + R + + +V +
Sbjct: 271 VTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVAL 330
Query: 218 AEKLVKDTANEIFPDDKICDL-LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILD 276
A +L + A++ +P D + +I G G+L +A +A M + GF+L AYN +
Sbjct: 331 AMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNIL-- 388
Query: 277 CVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ CRKK RL EA ++ +M+ G+ +V T+N L+S LCK +L M
Sbjct: 389 -IGGFCRKK---RLH-EAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNM 443
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
+ GC P+ TF L+ +A + E ++ M A Y + LC +
Sbjct: 444 IDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREV 503
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVD 456
+ A+ +F++M+ + + TY+ L+ N +KA L D+ KE R
Sbjct: 504 DVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM---------KEERCT 554
Query: 457 PRYLKKPIAVKKGKKRETLPE 477
P Y+ + + E LPE
Sbjct: 555 PDYVTMDVLM------EWLPE 569
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 128/314 (40%), Gaps = 44/314 (14%)
Query: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKIC 236
+P + +GF ++M D G + D + +++ LC+NG ++ A K+ T + PD
Sbjct: 281 QPKEAIGFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATY 339
Query: 237 DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEK 296
L++G+ G L E L M R G +N IL C K D EA
Sbjct: 340 CTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN-ILICAYAKQEKVD------EAML 392
Query: 297 VLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSL- 355
V M +G+ NV T+ +I LCK +DA+ F +M + G PN + LI SL
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 356 ----------------------------------YQAARVGEGDEMIDRMKSAGYAIGKK 381
+ RV E +++ D M G
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512
Query: 382 DYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEA 441
Y + C ++++A + M + G PD TY+ L+ +C +R+D A ALF E
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572
Query: 442 VRNGVEVKPKEYRV 455
V +GV Y +
Sbjct: 573 VSSGVSPNIITYNI 586
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 133/320 (41%), Gaps = 30/320 (9%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T S +D L + GR T+ F+ M + G + D + +++ G L+
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKR-GLEPDIATYCTLLQGYATKGALVEMHALLDL 361
Query: 225 TA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCR 283
N I PD + ++LI + K+DEA + +M + G V Y ++ + K
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 284 KKDP----------------------------FRLDSEAEKVLLDMEYNGVPRNVETFNV 315
D F +AE+++L+M G+ N FN
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+I + CK R ++ KLF M G PN T+ LI A ++ E +++ M S G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
Y + C + R++ A+++F++M + G +P+ TY++++ R A
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601
Query: 436 ALFDEAVRNGVEVKPKEYRV 455
L+ ++G +++ Y +
Sbjct: 602 ELYVGITKSGTQLELSTYNI 621
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 19/297 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD 224
T + I L ++G + +FE+M D G + ++ LC AE+L+ +
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILE 466
Query: 225 TANEIFPDDKIC------DLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCV 278
D IC + +I C +G++ E+++L M R G + + Y+ ++D
Sbjct: 467 -----MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521
Query: 279 SKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338
L K D EA K+L M G+ + T+N LI+ C++ R +DA+ LF M
Sbjct: 522 C-LAGKMD------EATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574
Query: 339 WGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQ 398
G PN T+ ++++ L+ R E+ + +G + Y L LC ++
Sbjct: 575 SGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDE 634
Query: 399 AMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
A+ +F+ + ++ T+++++ R D+A LF NG+ + Y +
Sbjct: 635 ALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 691
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 9/271 (3%)
Query: 186 FERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWC 244
F +M R +G + + V+ LC++G A + +E + P+ + LI C
Sbjct: 394 FSKM-RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 245 VDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYN 304
+ K D+A+ L EM G L T+ +N I + C++ E+EK+ M
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSI---IHSHCKEGRVI----ESEKLFDLMVRI 505
Query: 305 GVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG 364
GV NV T++ LI C + ++A KL M G P+ T+ LI + +R+ +
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565
Query: 365 DEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTK 424
+ M S+G + Y L L R A ++ + G + TY++++
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625
Query: 425 WCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
C +N D+A +F ++++ + + +
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNI 656
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
Query: 205 VVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
++ C+ G +EKL + P+ LI G+C+ GK+DEA +L M+ G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
+ V YN +++ ++ R D L E M +GV N+ T+N+++ L
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKE-------MVSSGVSPNIITYNIILQGLFHT 594
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDY 383
RR+ A +L+ + + G +T+ +++ L + E M + + + +
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654
Query: 384 YEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLL 421
+ L + R ++A +F + +G PD TY L+
Sbjct: 655 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 692
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 12/259 (4%)
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI--FPDDKICDLLIKGWCVDGKLDE 251
GF+ + + +++ LC + S A +V E+ PD C +L+KG C + + E
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQE 176
Query: 252 AKRLAREMY---RGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
A L M GG V+Y +++ K + E +LD +
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE----MLDRR---ISP 229
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
+V T++ +I+ LCK + + A+++ M + G PN T+ ++ + + E +
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289
Query: 369 DRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAH 428
+M+S G Y + LC R +A +F+ M G PD TY L+ +
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Query: 429 NRVDKANALFDEAVRNGVE 447
+ + +AL D VRNG+
Sbjct: 350 GALVEMHALLDLMVRNGIH 368
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 27/255 (10%)
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
++ + A ++ P +LI C G+LD + + GF + + + +L
Sbjct: 74 RMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLL---K 130
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE- 338
LC K R + VL M +V + +L+ LC RS++A++L + M +
Sbjct: 131 GLCADK---RTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 187
Query: 339 --WGCHPNETTFLVLIKSLYQAARVGEGD---------EMIDRMKSAGYAIGKKDYYEFL 387
G P+ ++ +I ++ EGD EM+DR S Y +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFK-----EGDSDKAYSTYHEMLDRRISPDVVT----YSSII 238
Query: 388 TRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
LC + +++AM V M +G P+ TY+ ++ +C+ + +A + +GVE
Sbjct: 239 AALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVE 298
Query: 448 VKPKEYRVDPRYLKK 462
Y YL K
Sbjct: 299 PDVVTYNSLMDYLCK 313
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 123/316 (38%), Gaps = 44/316 (13%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
A+ + L AGR T+ GF+ + +++ C G +A K+ +
Sbjct: 181 ATMVHGLCEAGR-TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N P+ + LI G C GK++ A L M G E V Y ++ +
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
FRL L ME NG+ N TF+VLI LCK + E+A + + G NE
Sbjct: 300 CAFRL-------LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNE 352
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM----- 400
+ LI L + ++ DE++ +M S G+ Y + LC +++ QA
Sbjct: 353 VVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLED 412
Query: 401 ------------------------------SVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+F+KM G NPD TY + + +C R
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 431 VDKANALFDEAVRNGV 446
++ A ++ + V GV
Sbjct: 473 MEDAESMIVQMVDRGV 488
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
A+ PD + ++ G C G+ +EA+ L E GFE V YN ++D C
Sbjct: 170 ADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID---GYCNAG 226
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG----- 340
+ A KV M+ N NV T+ LI LCK + E A+ LF RM E G
Sbjct: 227 EM----EHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNV 282
Query: 341 ----------CH--------------------PNETTFLVLIKSLYQAARVGEGDEMIDR 370
C+ PN+ TF VLI +L + +V E +
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+ G + + Y + LC +I+ A + +KM ++G PD+ +Y L+ C +
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+ +A + ++ + G++ P Y + L + + + KK
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 133/300 (44%), Gaps = 9/300 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I L ++G+ + + F RM + G + + + +++ C G+ A +L+
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRM-VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306
Query: 224 DT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
N + P+D +LI C K++EA+ + + G ++ V Y ++D LC
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID---GLC 363
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ ++D+ A++++ M G + +++ LI LC+ ++ A + M E G
Sbjct: 364 KTG---KIDA-ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
+ T+ ++I L + ++ D+M + G Y F+ C R+E A S+
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+M G P+ TY+ L+ + V +A + F+ V G + Y V R + K
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 135/358 (37%), Gaps = 59/358 (16%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F+ +H + N V T + ID L + + + F + + G K ++ ++
Sbjct: 302 FRLLH-LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKK-GVKVNEVVYTSLI 359
Query: 207 EKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LC+ G A++L++ +E F PD LI G C KL +A + +M G +
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIR 324
V Y I+D +L R+ + SE K + D M G+ ++ T+ V + + C+
Sbjct: 420 ASPVTYTIIID---ELVRE-----VGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEG 471
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA------- 377
R EDA + +M + G PN T+ LI+ V + + M G+
Sbjct: 472 RMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531
Query: 378 ----------------------------------------IGKKDYYEFLTRLCGIERIE 397
+ Y F+ LC ++R+E
Sbjct: 532 VLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLE 591
Query: 398 QAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV 455
+A F M+ P + Y ++ C + A L D ++G + YR+
Sbjct: 592 EAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRI 649
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 7/209 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI +C+ G + AK+ + G + AY V CR + + A +V
Sbjct: 78 LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF---VLGYCRAG----MLTHACRVF 130
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ M G R T+ L+ L +A+ +F M C P+ + ++ L +A
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R E + +++ S G+ Y + C +E A+ VFE M + +P+ TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ C +V++A LF V G+E
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLE 279
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 7/291 (2%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T ID LVR F++M G D + + V CE G AE ++
Sbjct: 422 PVTYTIIIDELVREVGSEGPKKIFDKMIAT-GINPDIVTYTVFVRSYCEEGRMEDAESMI 480
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ +FP+ + LI+G+ G + +A M G++ +Y +L V K
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540
Query: 282 CRKKDPFRL----DSEAEKVLL-DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ + D + +VLL D+ +P + ++ I LC++ R E+A F M
Sbjct: 541 SSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGM 600
Query: 337 GEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERI 396
P+E + +I + + + ++D M +GY + Y ++ LC
Sbjct: 601 QNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNF 660
Query: 397 EQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVE 447
A VF + N D + +L+ V + ++L +G +
Sbjct: 661 RTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQ 711
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 21/248 (8%)
Query: 142 GRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDS 201
GR +D +++ +VD T + I G +Q FE M G+K ++DS
Sbjct: 471 GRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGK-GWKPNEDS 529
Query: 202 ----LRLVVEKLCENGYASY--------AEKLVKDTANEIFP-DDKICDLLIKGWCVDGK 248
LRLVV+K + + L++D P I I+ C +
Sbjct: 530 YTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDR 589
Query: 249 LDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPR 308
L+EAK M Y I+DC +L ++ ++A +L M +G
Sbjct: 590 LEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRL-------KILTDALTLLDSMTKSGYLP 642
Query: 309 NVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMI 368
++E++ ++IS+LC+ A ++F + + +E + +LI L Q V E ++
Sbjct: 643 HLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLL 702
Query: 369 DRMKSAGY 376
MK GY
Sbjct: 703 SVMKEHGY 710
>gi|357127910|ref|XP_003565620.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Brachypodium distachyon]
Length = 1088
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 121/295 (41%), Gaps = 31/295 (10%)
Query: 151 HDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLC 210
H ++D + ID + R G +V+GF + MER G K + + +V C
Sbjct: 260 HRLMLDKGIAADVVNYTTVIDGMCREGSVDKVMGFLDEMERS-GAKPNLITYTSLVGGFC 318
Query: 211 ENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTV 269
+ A +V+ + + D+ + +LI C G LD+A L EM G + GTV
Sbjct: 319 KRNRLEDAFSVVRKLEQKGVVVDEYVYSILIDSLCKMGDLDKAFCLLGEMEGKGIKAGTV 378
Query: 270 AYNCILDCVSKLCRKKDPFRLDSEAEKVLLD--------------------------MEY 303
YN ++D LC+ D ++ V D +E
Sbjct: 379 TYNTVID---GLCKAGDTNNAIEISQGVAADNFTYSMLLHGCIKGEDSTGIMAIKSRLES 435
Query: 304 NGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGE 363
+G+ +V T N+LI L + + +DA LF+RM + G PN T+ +I + + +G
Sbjct: 436 SGIAVDVVTCNILIKALFMVNKMDDACSLFHRMRDMGLSPNTVTYHTIINMMCKLGDIGR 495
Query: 364 GDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
E+ D K G + + LC ++ A +F + PDS TY
Sbjct: 496 AVELFDEYKKDKSLSGTAVHNVLIGALCNGGKVNIAEQIFYDLIHKKLRPDSCTY 550
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 108/280 (38%), Gaps = 54/280 (19%)
Query: 173 LVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFP 231
L + G F E+ E+ GF D +VVE LC GY A L + E I P
Sbjct: 694 LKKEGEILDAYNFLEQAEQS-GFSVDLAMYSIVVEGLCRGGYLEKALDLCETMQKEGIHP 752
Query: 232 DDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLD 291
+ + ++ G C G EA RL + L T+ IL + LCR+ LD
Sbjct: 753 TIIVHNSVLSGLCQHGCFTEAFRLFDYLESSNI-LPTIITYAIL--IGALCREG---FLD 806
Query: 292 SEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLF------------YRMG-- 337
+A +++ M G+ +N+LIS C +E A+ L + +G
Sbjct: 807 -DAYQLIQKMSNKGIRPTTRVYNLLISGYCNYGLTEKALGLMSHFEEHFLLPDAFTLGSV 865
Query: 338 ------------------EWGCH---PNETTFLVLIKSLYQAARVGEG----------DE 366
E+ C P+ F+ L+K LY R+ E E
Sbjct: 866 INGHCLKGNTEAALGFFNEYHCKEMVPDFVGFMSLVKGLYAKGRMEESRGILREMFQCKE 925
Query: 367 MIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKM 406
++D + S G + + L+ C RI++ +++ ++
Sbjct: 926 IVDLINSVGNEVQTESLVALLSSACEEGRIDEVVTILNEV 965
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 63/146 (43%)
Query: 293 EAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLI 352
+A L E +G ++ +++++ LC+ E A+ L M + G HP ++
Sbjct: 702 DAYNFLEQAEQSGFSVDLAMYSIVVEGLCRGGYLEKALDLCETMQKEGIHPTIIVHNSVL 761
Query: 353 KSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHN 412
L Q E + D ++S+ Y + LC ++ A + +KM G
Sbjct: 762 SGLCQHGCFTEAFRLFDYLESSNILPTIITYAILIGALCREGFLDDAYQLIQKMSNKGIR 821
Query: 413 PDSETYDLLMTKWCAHNRVDKANALF 438
P + Y+LL++ +C + +KA L
Sbjct: 822 PTTRVYNLLISGYCNYGLTEKALGLM 847
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 7/195 (3%)
Query: 246 DGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG 305
+G++ +A + + GF + Y+ + V LCR +A + M+ G
Sbjct: 697 EGEILDAYNFLEQAEQSGFSVDLAMYSIV---VEGLCRGG----YLEKALDLCETMQKEG 749
Query: 306 VPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGD 365
+ + N ++S LC+ +A +LF + P T+ +LI +L + + +
Sbjct: 750 IHPTIIVHNSVLSGLCQHGCFTEAFRLFDYLESSNILPTIITYAILIGALCREGFLDDAY 809
Query: 366 EMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKW 425
++I +M + G + Y ++ C E+A+ + + PD+ T ++
Sbjct: 810 QLIQKMSNKGIRPTTRVYNLLISGYCNYGLTEKALGLMSHFEEHFLLPDAFTLGSVINGH 869
Query: 426 CAHNRVDKANALFDE 440
C + A F+E
Sbjct: 870 CLKGNTEAALGFFNE 884
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 16/198 (8%)
Query: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221
G T + ID L +AG + E G D + +++ C G S
Sbjct: 376 GTVTYNTVIDGLCKAGDTNNAI------EISQGVAADNFTYSMLLHG-CIKGEDSTGIMA 428
Query: 222 VKD--TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
+K ++ I D C++LIK + K+D+A L M G TV Y+ I++ +
Sbjct: 429 IKSRLESSGIAVDVVTCNILIKALFMVNKMDDACSLFHRMRDMGLSPNTVTYHTIINMMC 488
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
KL L E +K D +G NVLI LC + A ++FY +
Sbjct: 489 KLGDIGRAVELFDEYKK---DKSLSGTA----VHNVLIGALCNGGKVNIAEQIFYDLIHK 541
Query: 340 GCHPNETTFLVLIKSLYQ 357
P+ T+ LI + ++
Sbjct: 542 KLRPDSCTYRKLIHANFK 559
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 123/316 (38%), Gaps = 44/316 (13%)
Query: 167 ASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDT- 225
A+ + L AGR T+ GF+ + +++ C G +A K+ +
Sbjct: 181 ATMVHGLCEAGR-TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
N P+ + LI G C GK++ A L M G E V Y ++ +
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
FRL L ME NG+ N TF+VLI LCK + E+A + + G NE
Sbjct: 300 CAFRL-------LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNE 352
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAM----- 400
+ LI L + ++ DE++ +M S G+ Y + LC +++ QA
Sbjct: 353 VVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLED 412
Query: 401 ------------------------------SVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+F+KM G NPD TY + + +C R
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 431 VDKANALFDEAVRNGV 446
++ A ++ + V GV
Sbjct: 473 MEDAESMIVQMVDRGV 488
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
A+ PD + ++ G C G+ +EA+ L E GFE V YN ++D C
Sbjct: 170 ADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID---GYCNAG 226
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWG----- 340
+ A KV M+ N NV T+ LI LCK + E A+ LF RM E G
Sbjct: 227 EM----EHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNV 282
Query: 341 ----------CH--------------------PNETTFLVLIKSLYQAARVGEGDEMIDR 370
C+ PN+ TF VLI +L + +V E +
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342
Query: 371 MKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNR 430
+ G + + Y + LC +I+ A + +KM ++G PD+ +Y L+ C +
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402
Query: 431 VDKANALFDEAVRNGVEVKPKEYRVDPRYLKKPIAVKKGKK 471
+ +A + ++ + G++ P Y + L + + + KK
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 133/300 (44%), Gaps = 9/300 (3%)
Query: 164 KTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVK 223
+T I L ++G+ + + F RM + G + + + +++ C G+ A +L+
Sbjct: 248 RTYTELIHGLCKSGKVERAMVLFSRM-VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306
Query: 224 DT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLC 282
N + P+D +LI C K++EA+ + + G ++ V Y ++D LC
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID---GLC 363
Query: 283 RKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCH 342
+ ++D+ A++++ M G + +++ LI LC+ ++ A + M E G
Sbjct: 364 KTG---KIDA-ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Query: 343 PNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSV 402
+ T+ ++I L + ++ D+M + G Y F+ C R+E A S+
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479
Query: 403 FEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRVDPRYLKK 462
+M G P+ TY+ L+ + V +A + F+ V G + Y V R + K
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 7/209 (3%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
LI +C+ G + AK+ + G + AY V CR + + A +V
Sbjct: 78 LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF---VLGYCRAG----MLTHACRVF 130
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
+ M G R T+ L+ L +A+ +F M C P+ + ++ L +A
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
R E + +++ S G+ Y + C +E A+ VFE M + +P+ TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 419 DLLMTKWCAHNRVDKANALFDEAVRNGVE 447
L+ C +V++A LF V G+E
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLE 279
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 121/321 (37%), Gaps = 59/321 (18%)
Query: 147 FKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVV 206
F+ +H + N V T + ID L + + + F + + G K ++ ++
Sbjct: 302 FRLLH-LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKK-GVKVNEVVYTSLI 359
Query: 207 EKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFE 265
+ LC+ G A++L++ +E F PD LI G C KL +A + +M G +
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Query: 266 LGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD-MEYNGVPRNVETFNVLISNLCKIR 324
V Y I+D +L R+ + SE K + D M G+ ++ T+ V + + C+
Sbjct: 420 ASPVTYTIIID---ELVRE-----VGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEG 471
Query: 325 RSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYA------- 377
R EDA + +M + G PN T+ LI+ V + + M G+
Sbjct: 472 RMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531
Query: 378 ----------------------------------------IGKKDYYEFLTRLCGIERIE 397
+ Y F+ LC ++R+E
Sbjct: 532 VLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLE 591
Query: 398 QAMSVFEKMKTDGHNPDSETY 418
+A F M+ P + Y
Sbjct: 592 EAKHFFMGMQNANLTPSEDVY 612
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 7/196 (3%)
Query: 163 PKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLV 222
P T ID LVR F++M G D + + V CE G AE ++
Sbjct: 422 PVTYTIIIDELVREVGSEGPKKIFDKMIAT-GINPDIVTYTVFVRSYCEEGRMEDAESMI 480
Query: 223 KDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKL 281
+ +FP+ + LI+G+ G + +A M G++ +Y +L V K
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540
Query: 282 CRKKDPFRL----DSEAEKVLL-DMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRM 336
+ + D + +VLL D+ +P + ++ I LC++ R E+A F M
Sbjct: 541 SSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGM 600
Query: 337 GEWGCHPNETTFLVLI 352
P+E + +I
Sbjct: 601 QNANLTPSEDVYTSII 616
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 17/262 (6%)
Query: 207 EKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFEL 266
+KL + Y Y+E + K I P + LI G+C+ G+ EA L REM
Sbjct: 224 DKLVNDAYELYSEMITK----RISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINP 279
Query: 267 GTVAYNCILDCVSK-----------LCRKKDPFRLDSEAEKVLLD--MEYNGVPRNVETF 313
+N ++D + K K+ D L+D N V + +
Sbjct: 280 DVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVY 339
Query: 314 NVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKS 373
+++I+ CKI+ + A+ LFY M P+ T+ LI L ++ R+ E++D M+
Sbjct: 340 SIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRD 399
Query: 374 AGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDK 433
+G Y + LC +++A+++ +K+K G D TY++L+ C R+
Sbjct: 400 SGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKD 459
Query: 434 ANALFDEAVRNGVEVKPKEYRV 455
A +F + + G + Y +
Sbjct: 460 AQVIFQDLLIKGYNLTVWTYTI 481
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 15/284 (5%)
Query: 170 IDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEI 229
+ LV+ V+ F ++E + G K + SL +++ C G +A +
Sbjct: 78 LSSLVKLKHYPTVISLFYQLEFN-GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMG 136
Query: 230 F-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPF 288
+ P+ L+KG+C++ K+ EA + GF V+Y +++ + K+ +
Sbjct: 137 YHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAAL 196
Query: 289 RLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTF 348
++ + E L V +V ++ +I LCK + DA +L+ M P T
Sbjct: 197 QMLRQIEGKL-------VSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTL 249
Query: 349 LVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEF---LTRLCGIERIEQAMSVFEK 405
LI Y VG+ E ++ D Y F + LC +I++A S
Sbjct: 250 NSLI---YGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAV 306
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVK 449
M +G PD TY LM +C N V+KA ++ + ++K
Sbjct: 307 MMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIK 350
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 226 ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKK 285
NE+ + ++I G+C +D+A L EM TV YN ++D + K R
Sbjct: 329 VNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRIS 388
Query: 286 DPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNE 345
+ L E M +G P ++ T+N LI LCK + AI L ++ + G +
Sbjct: 389 YAWELVDE-------MRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDM 441
Query: 346 TTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEK 405
T+ +LI L + R+ + + + GY + Y + LC + +A ++ K
Sbjct: 442 YTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSK 501
Query: 406 MKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGV 446
M+ +G PD+ T + ++ +++ ++A L E + G+
Sbjct: 502 MEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 161 LGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYA 218
+ P T+ S ID L ++GR + + M RD G D + +++ LC+N + A
Sbjct: 367 IAPDTVTYNSLIDGLCKSGRISYAWELVDEM-RDSGQPADIITYNSLIDALCKNHHVDKA 425
Query: 219 EKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDC 277
LVK ++ I D ++LI G C G+L +A+ + +++ G+ L Y +
Sbjct: 426 IALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIM--- 482
Query: 278 VSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMG 337
++ LC + L +EAE +L ME NG + T +I L + ++E A KL M
Sbjct: 483 INGLCLEG----LLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMI 538
Query: 338 EWG 340
G
Sbjct: 539 ARG 541
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 131/294 (44%), Gaps = 18/294 (6%)
Query: 165 TLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKL--CE---NGYASYAE 219
T + ID + G + F+ M + G + SL ++E C+ N + + +
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEM-KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240
Query: 220 KLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVS 279
L AN +F + L+ C +GK++EA L E+ G V+YN I +
Sbjct: 241 ALESGLAN-VFTFNT----LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI---IL 292
Query: 280 KLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEW 339
CRK + + A KV +M NG N TF +L+ K E+A +F+RM +
Sbjct: 293 GHCRKDNI----NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 348
Query: 340 GCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQA 399
P +TT ++IK L +A R EG ++ ++ S G+ Y + I A
Sbjct: 349 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 408
Query: 400 MSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEY 453
+V+ +M G P + TY L+ +C N +D A L ++ R G+++ K Y
Sbjct: 409 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 462
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 120/298 (40%), Gaps = 11/298 (3%)
Query: 154 LVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENG 213
++DN T +D + G F RM +D +L ++++ LC+ G
Sbjct: 310 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM-KDANILPTDTTLGIIIKGLCKAG 368
Query: 214 YASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYN 272
+ L ++ F P + +I G+ +G ++ A + REM G TV Y
Sbjct: 369 RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYT 428
Query: 273 CILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKL 332
++D C+ + A K+L DM+ G+ +++ + LI CK R + A +L
Sbjct: 429 SLID---GFCKGNNI----DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 481
Query: 333 FYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCG 392
+ G PN + +I V E ++ +M + G K Y + L
Sbjct: 482 LNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLK 541
Query: 393 IERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKP 450
R+ A + +M + G PD + +L+ C + + A + ++ NG + P
Sbjct: 542 SGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM--NGKNMIP 597
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 239 LIKGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVL 298
L+KG+C+ G L A L E+ G V Y+ ++D K + F SE
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSE----- 205
Query: 299 LDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQA 358
M+ G+ +V + N ++ K + ++A +F E G N TF L+ L +
Sbjct: 206 --MKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKE 262
Query: 359 ARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETY 418
++ E + D + + G + Y + C + I A V+++M +G P++ T+
Sbjct: 263 GKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTF 322
Query: 419 DLLMTKWCAHNRVDKANALF 438
+LM + ++ A ++F
Sbjct: 323 TILMDGYFKKGDIENAFSIF 342
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 127/335 (37%), Gaps = 47/335 (14%)
Query: 127 FSHTDETLSFFTDYFGRRKDFK---AIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVL 183
F+ T + D + ++ D + +I + D + TL I L +AGR +
Sbjct: 315 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 374
Query: 184 GFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTAN-EIFPDDKICDLLIKG 242
F + GF +++ + G + A + ++ I P LI G
Sbjct: 375 DLFNKFVSQ-GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDG 433
Query: 243 WCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDME 302
+C +D A +L +M R G ++ AY ++D C+++D A ++L ++
Sbjct: 434 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID---GFCKRRDM----KSAHELLNELR 486
Query: 303 YNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVG 362
G+ N +N +I+ + E+AI L+ +M G + T+ LI L ++ R+
Sbjct: 487 GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLL 546
Query: 363 EGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMK--------------T 408
++ M S G + + + LC + E A + E M
Sbjct: 547 YASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLI 606
Query: 409 DGH---------------------NPDSETYDLLM 422
GH PD+ TYD+L+
Sbjct: 607 AGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 641
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 3/191 (1%)
Query: 256 AREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNV 315
ARE++ +G L + + C K+ EAE+ L + GV + E +++
Sbjct: 24 ARELHNKMLLVGVTGDCFTLHVMLRACLKEGNIL---EAEQHFLQAKARGVELDQEAYSI 80
Query: 316 LISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEGDEMIDRMKSAG 375
+ LC S A+ L M G P E TF +I + + V E + D M + G
Sbjct: 81 FVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCG 140
Query: 376 YAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYDLLMTKWCAHNRVDKAN 435
++ + C + A+ + ++ G P+ TY +L+ C + ++KA
Sbjct: 141 KSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAF 200
Query: 436 ALFDEAVRNGV 446
+ E G+
Sbjct: 201 EFYSEMKTKGI 211
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 137 FTDYFGRRKDFKAIHDFLVDNKEV-LGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDY 193
D F +R+D K+ H+ L + + L P S I + + +++M +
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE- 523
Query: 194 GFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEA 252
G D + +++ L ++G YA + + ++ I PDD+ +LI G C G+ + A
Sbjct: 524 GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 583
Query: 253 KRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312
+++ +M + YN ++ K ++ FRL E +LD VP N+ T
Sbjct: 584 RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDE----MLDRGL--VPDNI-T 636
Query: 313 FNVLIS 318
+++L++
Sbjct: 637 YDILVN 642
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 21/291 (7%)
Query: 91 SHVTPTPSLVQSTLNFSPEAGRAILG---FNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
+++ PT + + + +AGR+ G FN +++Q F T + D F + +
Sbjct: 348 ANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG--FVPTCMPYNTIIDGFIKEGNI 405
Query: 148 KAIHDFLVDNKEV-LGPKTLA--SCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRL 204
+ + EV + P T+ S ID + L M+R G K D +
Sbjct: 406 NLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK-GLKMDIKAYGT 464
Query: 205 VVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAREMYRGG 263
+++ C+ A +L+ + + P+ I + +I G+ ++EA L ++M G
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 524
Query: 264 FELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI 323
Y ++D + K R A + +M G+ + VLI+ LC
Sbjct: 525 IPCDLKTYTSLIDGLLKSGRLL-------YASDIHTEMLSKGILPDDRAHTVLINGLCNK 577
Query: 324 RRSEDAIKLFYRMGEWGCHPNETTFLVLIKSLYQAARVGEG----DEMIDR 370
+ E+A K+ M P+ + LI ++ + E DEM+DR
Sbjct: 578 GQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 628
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,033,300,797
Number of Sequences: 23463169
Number of extensions: 346764717
Number of successful extensions: 906636
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4577
Number of HSP's successfully gapped in prelim test: 2492
Number of HSP's that attempted gapping in prelim test: 825532
Number of HSP's gapped (non-prelim): 37876
length of query: 503
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 356
effective length of database: 8,910,109,524
effective search space: 3171998990544
effective search space used: 3171998990544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)