Query 042606
Match_columns 72
No_of_seqs 97 out of 99
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 13:30:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042606.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/042606hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u97a_ a.17.1.2 (A:) Cytochro 66.4 2.5 0.00018 24.6 2.9 31 21-52 34-64 (69)
2 d3bjha_ a.39.2.1 (A:) Pheromon 39.3 6.4 0.00047 22.1 1.5 25 7-31 2-26 (117)
3 d2d5ba2 c.26.1.1 (A:1-348) Met 28.6 62 0.0045 20.0 7.7 52 3-54 23-90 (348)
4 d1qdma1 a.64.1.2 (A:1S-104S) ( 26.1 15 0.0011 20.3 1.7 15 33-47 4-18 (104)
5 d2d8da1 a.130.1.1 (A:3-82) Cho 19.8 52 0.0038 17.4 3.1 19 7-25 12-30 (80)
6 d1yvua1 b.34.14.1 (A:4-314) Ar 18.4 23 0.0017 24.6 1.6 21 35-55 284-304 (311)
7 d2db7a1 a.273.1.1 (A:3-57) Hai 17.8 49 0.0035 17.8 2.6 20 31-50 16-35 (55)
8 d1l9la_ a.64.1.1 (A:) Granulys 17.1 32 0.0023 18.1 1.7 27 21-48 32-58 (74)
9 d2gtga1 a.64.1.1 (A:2-79) Sapo 16.1 35 0.0026 17.5 1.7 33 15-48 27-59 (78)
10 d1n69a_ a.64.1.3 (A:) Saposin 13.1 97 0.0071 16.0 4.5 35 14-49 26-61 (78)
No 1
>d1u97a_ a.17.1.2 (A:) Cytochrome C oxidase copper chaperone, COX17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=66.39 E-value=2.5 Score=24.61 Aligned_cols=31 Identities=26% Similarity=0.736 Sum_probs=26.5
Q ss_pred HHHHHHhcCCHHHHhHHHHHHHHHHhhccCCC
Q 042606 21 KWCYRIEGVNHMQKCRHLVNQYLESTRGIGWG 52 (72)
Q Consensus 21 ~kCy~rEGvNh~qnC~~l~e~Yl~~~kdlG~~ 52 (72)
..|--..|+.. ++|+.++++|.+-+++.|+-
T Consensus 34 DeCil~~ge~~-~~C~~lIeahk~CMr~~GF~ 64 (69)
T d1u97a_ 34 DTCILFNGQDS-EKCKEFIEKYKECMKGYGFE 64 (69)
T ss_dssp HHHHHHTCTTS-TTSHHHHHHHHHHHHHHTCS
T ss_pred hHHHHhcCCcH-HHHHHHHHHHHHHHHHcCCC
Confidence 36888889874 68999999999999998874
No 2
>d3bjha_ a.39.2.1 (A:) Pheromone-binding protein asp1 {Common honeybee (Apis mellifera) [TaxId: 7460]}
Probab=39.32 E-value=6.4 Score=22.07 Aligned_cols=25 Identities=20% Similarity=0.488 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCH
Q 042606 7 WIDIEKAKIIREKLKWCYRIEGVNH 31 (72)
Q Consensus 7 wV~~e~~kIvrE~L~kCy~rEGvNh 31 (72)
||-.++..++++....|.+..|++-
T Consensus 2 ~~ppe~~e~~~~~~~~C~~~~gv~~ 26 (117)
T d3bjha_ 2 WVPPEVFDLVAEDKARCMSEHGTTQ 26 (117)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCH
T ss_pred CCCHHHHHHHHHHHHHhhhhhCcCH
Confidence 6778899999999999999999983
No 3
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]}
Probab=28.63 E-value=62 Score=19.99 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHHHH----------------HHHHHHHHHhcCCHHHHhHHHHHHHHHHhhccCCCCC
Q 042606 3 VREKWIDIEKAKIIR----------------EKLKWCYRIEGVNHMQKCRHLVNQYLESTRGIGWGKD 54 (72)
Q Consensus 3 iRE~wV~~e~~kIvr----------------E~L~kCy~rEGvNh~qnC~~l~e~Yl~~~kdlG~~~~ 54 (72)
+|...+.-.++|++| ..+..-.+.+|....+-|.....+|.+.++.+|+..+
T Consensus 23 ~r~~v~~D~l~R~lr~~G~~V~~v~g~D~~g~~i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (348)
T d2d5ba2 23 AYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGEDPKAFVDRVSGRFKRAWDLLGIAYD 90 (348)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEEECCSHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CHHHHHHHHHHHHHHhcCCCeEecCcCCCCCHHHHHHHHHcCCCHHHhhhhHHHHHHHHHHhcCcccc
Confidence 577777777888876 5566778899999999999999999999998887654
No 4
>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=26.07 E-value=15 Score=20.27 Aligned_cols=15 Identities=33% Similarity=0.669 Sum_probs=12.5
Q ss_pred HHhHHHHHHHHHHhh
Q 042606 33 QKCRHLVNQYLESTR 47 (72)
Q Consensus 33 qnC~~l~e~Yl~~~k 47 (72)
+.|..++++|.+.+-
T Consensus 4 ~eC~~~V~~Y~~~ii 18 (104)
T d1qdma1 4 QECKTIVSQYGQQIL 18 (104)
T ss_dssp HHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 579999999998654
No 5
>d2d8da1 a.130.1.1 (A:3-82) Chorismate mutase domain of P-protein {Thermus thermophilus [TaxId: 274]}
Probab=19.80 E-value=52 Score=17.43 Aligned_cols=19 Identities=11% Similarity=0.218 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 042606 7 WIDIEKAKIIREKLKWCYR 25 (72)
Q Consensus 7 wV~~e~~kIvrE~L~kCy~ 25 (72)
-||.+++.++.+|+.-+.+
T Consensus 12 ~iD~~i~~Ll~~R~~~~~~ 30 (80)
T d2d8da1 12 RVNREILRLLSERGRLVQE 30 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4799999999999876654
No 6
>d1yvua1 b.34.14.1 (A:4-314) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]}
Probab=18.36 E-value=23 Score=24.57 Aligned_cols=21 Identities=24% Similarity=0.574 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHhhccCCCCCC
Q 042606 35 CRHLVNQYLESTRGIGWGKDG 55 (72)
Q Consensus 35 C~~l~e~Yl~~~kdlG~~~~a 55 (72)
-+-+..+|.++++|-|||-|.
T Consensus 284 iryilrryvkalrdygwyisp 304 (311)
T d1yvua1 284 IRYILRRYVKALRDYGWYISP 304 (311)
T ss_dssp HHHHHHHHHHHHHTTTEEECS
T ss_pred HHHHHHHHHHHHHhcCcccCc
Confidence 355678999999999999874
No 7
>d2db7a1 a.273.1.1 (A:3-57) Hairy/enhancer-of-split related with YRPW motif protein 1; HESR-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.82 E-value=49 Score=17.82 Aligned_cols=20 Identities=25% Similarity=0.546 Sum_probs=16.7
Q ss_pred HHHHhHHHHHHHHHHhhccC
Q 042606 31 HMQKCRHLVNQYLESTRGIG 50 (72)
Q Consensus 31 h~qnC~~l~e~Yl~~~kdlG 50 (72)
.+..|..++.+|+..+.+++
T Consensus 16 GF~ECa~EV~RyL~~~eg~d 35 (55)
T d2db7a1 16 GFRECLAEVARYLSIIEGLD 35 (55)
T ss_dssp HHHHHHHHHHHHHHHTSCCC
T ss_pred cHHHHHHHHHHHhhccCCCC
Confidence 36789999999999888654
No 8
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.05 E-value=32 Score=18.13 Aligned_cols=27 Identities=15% Similarity=0.353 Sum_probs=20.2
Q ss_pred HHHHHHhcCCHHHHhHHHHHHHHHHhhc
Q 042606 21 KWCYRIEGVNHMQKCRHLVNQYLESTRG 48 (72)
Q Consensus 21 ~kCy~rEGvNh~qnC~~l~e~Yl~~~kd 48 (72)
+-|..--+ ....-|..++++|...+-+
T Consensus 32 ~~C~~lp~-~~~~~C~~lv~~Y~~~ii~ 58 (74)
T d1l9la_ 32 RVCRTGRS-RWRDVCRNFMRRYQSRVIQ 58 (74)
T ss_dssp HGGGSSCH-HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHCCH-HHHHHHHHHHHHHHHHHHH
Confidence 34875433 5788999999999997753
No 9
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.05 E-value=35 Score=17.47 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHhhc
Q 042606 15 IIREKLKWCYRIEGVNHMQKCRHLVNQYLESTRG 48 (72)
Q Consensus 15 IvrE~L~kCy~rEGvNh~qnC~~l~e~Yl~~~kd 48 (72)
|...--+.|-.- +.+....|..++++|...+-+
T Consensus 27 I~~~l~~~C~~l-p~~~~~~C~~~v~~y~~~ii~ 59 (78)
T d2gtga1 27 ILDAFDKMCSKL-PKSLSEECQEVVDTYGSSILS 59 (78)
T ss_dssp HHHHHHHHTTSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CcchhhhhHHHHHHHHHHHHH
Confidence 333334567432 335789999999999987653
No 10
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.12 E-value=97 Score=16.03 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=25.5
Q ss_pred HHHHH-HHHHHHHHhcCCHHHHhHHHHHHHHHHhhcc
Q 042606 14 KIIRE-KLKWCYRIEGVNHMQKCRHLVNQYLESTRGI 49 (72)
Q Consensus 14 kIvrE-~L~kCy~rEGvNh~qnC~~l~e~Yl~~~kdl 49 (72)
..+.+ --+.|..- |.....-|..++++|...+-++
T Consensus 26 ~~I~~~l~~~C~~l-p~~~~~~C~~~V~~y~~~ii~~ 61 (78)
T d1n69a_ 26 QALVEHVKEECDRL-GPGMADICKNYISQYSEIAIQM 61 (78)
T ss_dssp HHHHHHHHHHGGGG-CTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-ChHHHHHhHHHHHHHHHHHHHH
Confidence 43433 34567755 6778899999999999888754
Done!