BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 042607
         (249 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2D1G|A Chain A, Structure Of Francisella Tularensis Acid Phosphatase A
           (Acpa) Bound To Orthovanadate
 pdb|2D1G|B Chain B, Structure Of Francisella Tularensis Acid Phosphatase A
           (Acpa) Bound To Orthovanadate
          Length = 498

 Score = 38.5 bits (88), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 10/76 (13%)

Query: 58  QKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFD 117
           Q+++      ++ S  W+    II YD+  G YDHV +P +      DI G + Y     
Sbjct: 360 QEWLVNTINRIQQSKDWDSTAIIIIYDDSDGDYDHVYSPKSQF---SDIKGRQGY----- 411

Query: 118 RLGVRVPTIFISPWIQ 133
             G R+P + ISP+ +
Sbjct: 412 --GPRLPMLVISPYAK 425


>pdb|2A2O|A Chain A, Crystal Structure Of A Putativetena Family Transcriptional
           Regulator (Bt_3146) From Bacteroides Thetaiotaomicron
           Vpi-5482 At 2.16 A Resolution
 pdb|2A2O|B Chain B, Crystal Structure Of A Putativetena Family Transcriptional
           Regulator (Bt_3146) From Bacteroides Thetaiotaomicron
           Vpi-5482 At 2.16 A Resolution
 pdb|2A2O|C Chain C, Crystal Structure Of A Putativetena Family Transcriptional
           Regulator (Bt_3146) From Bacteroides Thetaiotaomicron
           Vpi-5482 At 2.16 A Resolution
 pdb|2A2O|D Chain D, Crystal Structure Of A Putativetena Family Transcriptional
           Regulator (Bt_3146) From Bacteroides Thetaiotaomicron
           Vpi-5482 At 2.16 A Resolution
 pdb|2A2O|E Chain E, Crystal Structure Of A Putativetena Family Transcriptional
           Regulator (Bt_3146) From Bacteroides Thetaiotaomicron
           Vpi-5482 At 2.16 A Resolution
 pdb|2A2O|F Chain F, Crystal Structure Of A Putativetena Family Transcriptional
           Regulator (Bt_3146) From Bacteroides Thetaiotaomicron
           Vpi-5482 At 2.16 A Resolution
 pdb|2A2O|G Chain G, Crystal Structure Of A Putativetena Family Transcriptional
           Regulator (Bt_3146) From Bacteroides Thetaiotaomicron
           Vpi-5482 At 2.16 A Resolution
 pdb|2A2M|A Chain A, Crystal Structure Of A Putativetena Family Transcriptional
           Regulator (Bt_3146) From Bacteroides Thetaiotaomicron
           Vpi-5482 At 1.88 A Resolution
 pdb|2A2M|B Chain B, Crystal Structure Of A Putativetena Family Transcriptional
           Regulator (Bt_3146) From Bacteroides Thetaiotaomicron
           Vpi-5482 At 1.88 A Resolution
          Length = 258

 Score = 30.0 bits (66), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 9/93 (9%)

Query: 127 FISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTD------FQQELVQMAATLNGDYKKDIY 180
           F + W+++ TF +P   L  R    K D    D      +   L      L  DY K I 
Sbjct: 16  FKNQWLRKRTFAIPASRLTGRLTTLKSDVPAADSLFWKLWNGSLDTAVQVLQTDYFKGIA 75

Query: 181 PHKLVEEMTVAEGAKYVEDAFKKFRGQCEKAEA 213
              L      A G+  V+D +  FRG+ + A A
Sbjct: 76  AGTLDPN---AYGSLXVQDGYYCFRGRDDYATA 105


>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of
           Semicarbazide-Sensitive Amine Oxidase
 pdb|2C10|B Chain B, The Structure Of A Truncated, Soluble Version Of
           Semicarbazide-Sensitive Amine Oxidase
 pdb|2C10|C Chain C, The Structure Of A Truncated, Soluble Version Of
           Semicarbazide-Sensitive Amine Oxidase
 pdb|2C10|D Chain D, The Structure Of A Truncated, Soluble Version Of
           Semicarbazide-Sensitive Amine Oxidase
 pdb|2C11|A Chain A, Crystal Structure Of The 2-Hydrazinopyridine Of
           Semicarbazide-Sensitive Amine Oxidase
 pdb|2C11|B Chain B, Crystal Structure Of The 2-Hydrazinopyridine Of
           Semicarbazide-Sensitive Amine Oxidase
 pdb|2C11|C Chain C, Crystal Structure Of The 2-Hydrazinopyridine Of
           Semicarbazide-Sensitive Amine Oxidase
 pdb|2C11|D Chain D, Crystal Structure Of The 2-Hydrazinopyridine Of
           Semicarbazide-Sensitive Amine Oxidase
          Length = 735

 Score = 28.5 bits (62), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 8   LKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDH 49
           L   H    HFK D +   L N+V  E   F  ++VP + +H
Sbjct: 488 LGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEH 529


>pdb|3LV4|A Chain A, Crystal Structure Of The Glycoside Hydrolase, Family 43
           Yxia Protein From Bacillus Licheniformis. Northeast
           Structural Genomics Consortium Target Bir14.
 pdb|3LV4|B Chain B, Crystal Structure Of The Glycoside Hydrolase, Family 43
           Yxia Protein From Bacillus Licheniformis. Northeast
           Structural Genomics Consortium Target Bir14
          Length = 456

 Score = 28.5 bits (62), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 11/70 (15%)

Query: 51  SHDVSEGQKFVKEVYEALRSSPQWNE--ILFI--ITYDEHGGFYDHV-------PTPVTG 99
           S  V +G   +  VYE L+ + +W E   L+   +T  E G FY +        P    G
Sbjct: 47  SSSVHDGNPLIPNVYEELKETFEWAESDTLWAPDVTQLEDGKFYXYYNACRGDSPRSALG 106

Query: 100 VPSPDDIVGP 109
           +   DDI GP
Sbjct: 107 LAVADDIEGP 116


>pdb|4EY3|A Chain A, Crystal Structure Of Solute Binding Protein Of Abc
           Transporter In Complex With P-Hydroxybenzoic Acid
 pdb|4EYG|A Chain A, Crystal Structure Of Solute Binding Protein Of Abc
           Transporter From Rhodopseudomonas Palustris Bisb5 In
           Complex With Vanillic Acid
 pdb|4EYG|B Chain B, Crystal Structure Of Solute Binding Protein Of Abc
           Transporter From Rhodopseudomonas Palustris Bisb5 In
           Complex With Vanillic Acid
 pdb|4EYK|A Chain A, Crystal Structure Of Solute Binding Protein Of Abc
           Transporter From Rhodopseudomonas Palustris Bisb5 In
           Complex With 3,4-Dihydroxy Benzoic Acid
          Length = 368

 Score = 28.1 bits (61), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 10/71 (14%)

Query: 129 SPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKDIYPHKLVEEM 188
           SP+I R +FTL + ++ + D  AK            ++  ATL  DY          +E 
Sbjct: 113 SPYIVRTSFTLAQSSIIIGDWAAKNG----------IKKVATLTSDYAPGNDALAFFKER 162

Query: 189 TVAEGAKYVED 199
             A G + VE+
Sbjct: 163 FTAGGGEIVEE 173


>pdb|1BEE|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
           Tyr
 pdb|1BEZ|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
           Tyr At Ph 5
          Length = 310

 Score = 27.7 bits (60), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 25/129 (19%)

Query: 34  EQRYFDLLSVPAN----DDHP------SHDVSEGQKFVKEVYEALRSSPQWNEIL--FII 81
           +QR+ +L   P +    DD P      +H + EG    ++V+  L   P W+ +    I 
Sbjct: 9   DQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIP 68

Query: 82  TYDEHGGFYDHVPTP-VTGVPSPDDIVGPEPYNFKF---------DRLGVRVPTIFISPW 131
            + E G     V  P   G    D  V  E Y F+F         +RL +R  T+ +  W
Sbjct: 69  VFAESGA---RVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDW 125

Query: 132 IQRGTFTLP 140
                 TLP
Sbjct: 126 GGFLGLTLP 134


>pdb|2DHD|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
           Haloalkane Dehalogenase
          Length = 310

 Score = 27.7 bits (60), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 25/129 (19%)

Query: 34  EQRYFDLLSVPAN----DDHP------SHDVSEGQKFVKEVYEALRSSPQWNEIL--FII 81
           +QR+ +L   P +    DD P      +H + EG    ++V+  L   P W+ +    I 
Sbjct: 9   DQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIP 68

Query: 82  TYDEHGGFYDHVPTP-VTGVPSPDDIVGPEPYNFKF---------DRLGVRVPTIFISPW 131
            + E G     V  P   G    D  V  E Y F+F         +RL +R  T+ +  W
Sbjct: 69  VFAESGA---RVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQXW 125

Query: 132 IQRGTFTLP 140
                 TLP
Sbjct: 126 GGFLGLTLP 134


>pdb|1CIJ|A Chain A, Haloalkane Dehalogenase Soaked With High Concentration Of
           Bromide
 pdb|1BE0|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Acetic Acid
          Length = 310

 Score = 27.7 bits (60), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 25/129 (19%)

Query: 34  EQRYFDLLSVPAN----DDHP------SHDVSEGQKFVKEVYEALRSSPQWNEIL--FII 81
           +QR+ +L   P +    DD P      +H + EG    ++V+  L   P W+ +    I 
Sbjct: 9   DQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIP 68

Query: 82  TYDEHGGFYDHVPTP-VTGVPSPDDIVGPEPYNFKF---------DRLGVRVPTIFISPW 131
            + E G     V  P   G    D  V  E Y F+F         +RL +R  T+ +  W
Sbjct: 69  VFAESGA---RVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDW 125

Query: 132 IQRGTFTLP 140
                 TLP
Sbjct: 126 GGFLGLTLP 134


>pdb|1EDB|A Chain A, Crystallographic And Fluorescence Studies Of The
           Interaction Of Haloalkane Dehalogenase With Halide Ions:
           Studies With Halide Compounds Reveal A Halide Binding
           Site In The Active Site
 pdb|1EDD|A Chain A, Crystallographic And Fluorescence Studies Of The
           Interaction Of Haloalkane Dehalogenase With Halide Ions:
           Studies With Halide Compounds Reveal A Halide Binding
           Site In The Active Site
 pdb|1EDE|A Chain A, Refined X-Ray Structures Of Haloalkane Dehalogenase At Ph
           6.2 And Ph 8.2 And Implications For The Reaction
           Mechanism
 pdb|2DHC|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
           Haloalkane Dehalogenase
 pdb|2DHE|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
           Haloalkane Dehalogenase
 pdb|2EDA|A Chain A, Crystallographic And Fluorescence Studies Of The
           Interaction Of Haloalkane Dehalogenase With Halide Ions:
           Studies With Halide Compounds Reveal A Halide Binding
           Site In The Active Site
 pdb|2EDC|A Chain A, Crystallographic And Fluorescence Studies Of The
           Interaction Of Haloalkane Dehalogenase With Halide Ions:
           Studies With Halide Compounds Reveal A Halide Binding
           Site In The Active Site
 pdb|2HAD|A Chain A, Crystal Structure Of Haloalkane Dehalogenase: An Enzyme To
           Detoxify Halogenated Alkanes
 pdb|2PKY|X Chain X, The Effect Of Deuteration On Protein Structure A High
           Resolution Comparison Of Hydrogenous And Perdeuterated
           Haloalkane Dehalogenase
 pdb|2YXP|X Chain X, The Effect Of Deuteration On Protein Structure A High
           Resolution Comparison Of Hydrogenous And Perdeuterated
           Haloalkane Dehalogenase
          Length = 310

 Score = 27.7 bits (60), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 25/129 (19%)

Query: 34  EQRYFDLLSVPAN----DDHP------SHDVSEGQKFVKEVYEALRSSPQWNEIL--FII 81
           +QR+ +L   P +    DD P      +H + EG    ++V+  L   P W+ +    I 
Sbjct: 9   DQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIP 68

Query: 82  TYDEHGGFYDHVPTP-VTGVPSPDDIVGPEPYNFKF---------DRLGVRVPTIFISPW 131
            + E G     V  P   G    D  V  E Y F+F         +RL +R  T+ +  W
Sbjct: 69  VFAESGA---RVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDW 125

Query: 132 IQRGTFTLP 140
                 TLP
Sbjct: 126 GGFLGLTLP 134


>pdb|3KXY|A Chain A, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|B Chain B, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|C Chain C, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|D Chain D, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|E Chain E, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|F Chain F, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|G Chain G, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|H Chain H, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|I Chain I, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|J Chain J, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|K Chain K, Crystal Structure Of The Exsc-Exse Complex
 pdb|3KXY|L Chain L, Crystal Structure Of The Exsc-Exse Complex
          Length = 133

 Score = 27.7 bits (60), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 9   KHFHQFDLHFKKDCEEGKLPNYVVV 33
           +H+H+FDLHF  D   GK+  Y  +
Sbjct: 77  RHWHRFDLHFGFDELTGKVQLYAQI 101


>pdb|3C9F|A Chain A, Crystal Structure Of 5'-Nucleotidase From Candida
          Albicans Sc5314
 pdb|3C9F|B Chain B, Crystal Structure Of 5'-Nucleotidase From Candida
          Albicans Sc5314
          Length = 557

 Score = 27.7 bits (60), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 74 WNEILFIITYDEHGGFYDHVPTPV 97
          WN+I F+ T D HG +  H+  P+
Sbjct: 13 WNDINFVHTTDTHGWYSGHINQPL 36


>pdb|1HDE|A Chain A, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
           Trp
 pdb|1HDE|B Chain B, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
           Trp
          Length = 310

 Score = 27.7 bits (60), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 25/129 (19%)

Query: 34  EQRYFDLLSVPAN----DDHP------SHDVSEGQKFVKEVYEALRSSPQWNEIL--FII 81
           +QR+ +L   P +    DD P      +H + EG    ++V+  L   P W+ +    I 
Sbjct: 9   DQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIP 68

Query: 82  TYDEHGGFYDHVPTP-VTGVPSPDDIVGPEPYNFKF---------DRLGVRVPTIFISPW 131
            + E G     V  P   G    D  V  E Y F+F         +RL +R  T+ +  W
Sbjct: 69  VFAESGA---RVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDW 125

Query: 132 IQRGTFTLP 140
                 TLP
Sbjct: 126 GGFLGLTLP 134


>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine
           Oxidase
 pdb|1TU5|B Chain B, Crystal Structure Of Bovine Plasma Copper-Containing Amine
           Oxidase
 pdb|2PNC|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine
           Oxidase In Complex With Clonidine
 pdb|2PNC|B Chain B, Crystal Structure Of Bovine Plasma Copper-Containing Amine
           Oxidase In Complex With Clonidine
          Length = 746

 Score = 27.3 bits (59), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 8   LKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDH 49
           L   H    H+K D + G L N+V  E   F   ++P + +H
Sbjct: 499 LGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTAIPWSPEH 540


>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1
 pdb|1US1|B Chain B, Crystal Structure Of Human Vascular Adhesion Protein-1
 pdb|1PU4|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1
 pdb|1PU4|B Chain B, Crystal Structure Of Human Vascular Adhesion Protein-1
 pdb|2Y73|A Chain A, The Native Structures Of Soluble Human Primary Amine
           Oxidase Aoc3
 pdb|2Y73|B Chain B, The Native Structures Of Soluble Human Primary Amine
           Oxidase Aoc3
 pdb|2Y74|A Chain A, The Crystal Structure Of Human Soluble Primary Amine
           Oxidase Aoc3 In The Off-Copper Conformation
 pdb|2Y74|B Chain B, The Crystal Structure Of Human Soluble Primary Amine
           Oxidase Aoc3 In The Off-Copper Conformation
          Length = 763

 Score = 27.3 bits (59), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 12  HQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDH 49
           H    HFK D +   L N+V  E   F  ++VP + +H
Sbjct: 520 HTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEH 557


>pdb|1B6G|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Chloride
          Length = 310

 Score = 27.3 bits (59), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 25/129 (19%)

Query: 34  EQRYFDLLSVPAN----DDHP------SHDVSEGQKFVKEVYEALRSSPQWNEIL--FII 81
           +QR+ +L   P +    DD P      +H + EG    ++V+  L   P W+ +    I 
Sbjct: 9   DQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIP 68

Query: 82  TYDEHGGFYDHVPTP-VTGVPSPDDIVGPEPYNFKF---------DRLGVRVPTIFISPW 131
            + E G     V  P   G    D  V  E Y F+F         +RL +R  T+ +  W
Sbjct: 69  VFAESGA---RVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDW 125

Query: 132 IQRGTFTLP 140
                 TLP
Sbjct: 126 GGFLGLTLP 134


>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space
           Group C2
 pdb|3ALA|B Chain B, Crystal Structure Of Vascular Adhesion Protein-1 In Space
           Group C2
 pdb|3ALA|C Chain C, Crystal Structure Of Vascular Adhesion Protein-1 In Space
           Group C2
 pdb|3ALA|D Chain D, Crystal Structure Of Vascular Adhesion Protein-1 In Space
           Group C2
 pdb|3ALA|E Chain E, Crystal Structure Of Vascular Adhesion Protein-1 In Space
           Group C2
 pdb|3ALA|F Chain F, Crystal Structure Of Vascular Adhesion Protein-1 In Space
           Group C2
 pdb|3ALA|G Chain G, Crystal Structure Of Vascular Adhesion Protein-1 In Space
           Group C2
          Length = 748

 Score = 26.9 bits (58), Expect = 9.7,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 12  HQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDH 49
           H    HFK D +   L N+V  E   F  ++VP + +H
Sbjct: 505 HTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEH 542


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.318    0.137    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,360,964
Number of Sequences: 62578
Number of extensions: 372579
Number of successful extensions: 797
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 788
Number of HSP's gapped (non-prelim): 23
length of query: 249
length of database: 14,973,337
effective HSP length: 96
effective length of query: 153
effective length of database: 8,965,849
effective search space: 1371774897
effective search space used: 1371774897
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)