BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 042607
         (249 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P06200|PHLC_PSEAE Hemolytic phospholipase C OS=Pseudomonas aeruginosa (strain ATCC
           15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=plcH PE=3
           SV=2
          Length = 730

 Score = 62.0 bits (149), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 24/131 (18%)

Query: 17  HFKKDCEEGKLP--NYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQ- 73
             +KD +E  LP  +++V    Y +         HP    S G+ +V  V EAL S+P+ 
Sbjct: 296 QLRKDVQENTLPQVSWIVAPYCYCE---------HPWWGPSFGEYYVTRVLEALTSNPEV 346

Query: 74  WNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFD---------RLGVRVP 124
           W   +FI+ YDE  GFYDH   P   VP   D VG    +   +          LG RVP
Sbjct: 347 WARTVFILNYDEGDGFYDHASAP---VPPWKDGVGLSTVSTAGEIEVSSGLPIGLGHRVP 403

Query: 125 TIFISPWIQRG 135
            I ISPW + G
Sbjct: 404 LIAISPWSKGG 414


>sp|Q9RGS8|PHLN_BURPS Non-hemolytic phospholipase C OS=Burkholderia pseudomallei (strain
           K96243) GN=plcN PE=1 SV=2
          Length = 700

 Score = 57.8 bits (138), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 33/140 (23%)

Query: 14  FDLHFKKDCEEGKLP--NYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSS 71
           FD+  ++D + G LP  +++   + Y          +HP+   + G  +V++V +AL S+
Sbjct: 287 FDV-LQQDVKNGTLPQVSWICAPEAY---------SEHPNWPANYGAWYVEQVLKALTSN 336

Query: 72  PQ-WNEILFIITYDEHGGFYDHVPTP---------VTGVPSPDDIVGPE------PYNFK 115
           P  W++    ITYDE+ GF+DHV  P         ++ V +  +I   +      PY   
Sbjct: 337 PDVWSKTALFITYDENDGFFDHVAPPFAPQSRENGLSTVSTAGEIFAGDATHMAGPYG-- 394

Query: 116 FDRLGVRVPTIFISPWIQRG 135
              LG RVP + +SPW + G
Sbjct: 395 ---LGPRVPMLVVSPWTKGG 411


>sp|P95245|PHLC_MYCTU Phospholipase C 3 OS=Mycobacterium tuberculosis GN=plcC PE=3 SV=2
          Length = 517

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 18/102 (17%)

Query: 48  DHPSHDVSEGQ-KFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDI 106
           +HPS  V+ G    V  +   LR+   W +   II YDEHGGF+DHV TP+T   +P+  
Sbjct: 313 EHPSFPVAVGAVTIVNLIRVLLRNPAVWEKTALIIAYDEHGGFFDHV-TPLT---APEGT 368

Query: 107 VGPE-PYNFKFDR------------LGVRVPTIFISPWIQRG 135
            G   P +   D+            LG RVP   ISP+ + G
Sbjct: 369 PGEWIPNSVDIDKVDGSGGIRGPIGLGFRVPCFVISPYSRGG 410


>sp|P95246|PHLB_MYCTU Phospholipase C 2 OS=Mycobacterium tuberculosis GN=plcB PE=1 SV=2
          Length = 521

 Score = 48.9 bits (115), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 31/142 (21%)

Query: 14  FDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQ 73
           + L F  D    +LP    V   +  LLS     +HP+  V+ G   + +    L S+P 
Sbjct: 289 YPLDFAADVRNNRLPKVSWVLPGF--LLS-----EHPAFPVNVGAVAIVDALRILLSNPA 341

Query: 74  -WNEILFIITYDEHGGFYDH--------------VPTP-VTGVPSPDDIVGPEPYNFKFD 117
            W +   I+ YDE+GGF+DH              V  P +  VP    I GP        
Sbjct: 342 VWEKTALIVNYDENGGFFDHVVPPTPPPGTPGEFVTVPDIDSVPGSGGIRGPI------- 394

Query: 118 RLGVRVPTIFISPWIQRGTFTL 139
            LG RVP + ISP+  RG   +
Sbjct: 395 GLGFRVPCLVISPY-SRGPLMV 415


>sp|Q04001|PHLA_MYCTU Phospholipase C 1 OS=Mycobacterium tuberculosis GN=plcA PE=1 SV=3
          Length = 520

 Score = 46.6 bits (109), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 56/134 (41%), Gaps = 31/134 (23%)

Query: 18  FKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQ-WNE 76
           F  D    +LP    V     ++L      +HP+  V+ G   +      L S+P  W +
Sbjct: 289 FAADVRANRLPK---VSWLVPNIL----QSEHPALPVALGAVSMVTALRILLSNPAVWEK 341

Query: 77  ILFIITYDEHGGFYDHVPTP---------------VTGVPSPDDIVGPEPYNFKFDRLGV 121
              I++YDE+GGF+DHV  P               +  VP    I GP         LG 
Sbjct: 342 TALIVSYDENGGFFDHVTPPTAPPGTPGEFVTVPNIDAVPGSGGIRGPL-------GLGF 394

Query: 122 RVPTIFISPWIQRG 135
           RVP I ISP+  RG
Sbjct: 395 RVPCIVISPY-SRG 407


>sp|P15713|PHLN_PSEAE Non-hemolytic phospholipase C OS=Pseudomonas aeruginosa (strain
           ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=plcN
           PE=3 SV=2
          Length = 692

 Score = 43.9 bits (102), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 28/137 (20%)

Query: 18  FKKDCEEGKLP--NYVVVEQRYFDLLSVPANDDHPSHDVS-EGQKFVKEVYEALRSSPQ- 73
            K+D     LP  +++V   +Y          +HP       G ++   V +AL ++P+ 
Sbjct: 272 LKRDVLANSLPQVSWIVAPAKY---------SEHPGPSSPIWGAEYTSWVLDALTANPEV 322

Query: 74  WNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIV---------------GPEPYNFKFDR 118
           W++   ++ +DE+ GF+DHV  P     + D  +               G   Y  +   
Sbjct: 323 WSKTALLVMFDENDGFFDHVAPPAAPSLNKDGTLRGKTTADATLEWHTKGDIRYRNQPYG 382

Query: 119 LGVRVPTIFISPWIQRG 135
           LG RVP   ISPW + G
Sbjct: 383 LGPRVPMYVISPWSKGG 399


>sp|P0A5R8|PHLD_MYCTU Phospholipase C 4 OS=Mycobacterium tuberculosis GN=plcD PE=3 SV=1
          Length = 514

 Score = 41.2 bits (95), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 19/133 (14%)

Query: 13  QFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSP 72
            +   F  D    +LP    V     +        +HP+   + G   +  +   L ++P
Sbjct: 282 SYPASFAADVLANRLPRVSWVIPNVLE-------SEHPAVPAAAGAFAIVNILRILLANP 334

Query: 73  Q-WNEILFIITYDEHGGFYDHV---------PTPVTGVPSPDDIVGPEPYNFKFDRLGVR 122
             W +   I++YDE+GGF+DHV         P     VP  D + G          LG R
Sbjct: 335 AVWEKTALIVSYDENGGFFDHVVPATAPAGTPGEYVTVPDIDQVPGSGGIRGPIG-LGFR 393

Query: 123 VPTIFISPWIQRG 135
           VP   ISP+  RG
Sbjct: 394 VPCFVISPY-SRG 405


>sp|P0A5R9|PHLD_MYCBO Phospholipase C 4 OS=Mycobacterium bovis (strain ATCC BAA-935 /
           AF2122/97) GN=plcD PE=3 SV=1
          Length = 514

 Score = 41.2 bits (95), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 19/133 (14%)

Query: 13  QFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSP 72
            +   F  D    +LP    V     +        +HP+   + G   +  +   L ++P
Sbjct: 282 SYPASFAADVLANRLPRVSWVIPNVLE-------SEHPAVPAAAGAFAIVNILRILLANP 334

Query: 73  Q-WNEILFIITYDEHGGFYDHV---------PTPVTGVPSPDDIVGPEPYNFKFDRLGVR 122
             W +   I++YDE+GGF+DHV         P     VP  D + G          LG R
Sbjct: 335 AVWEKTALIVSYDENGGFFDHVVPATAPAGTPGEYVTVPDIDQVPGSGGIRGPIG-LGFR 393

Query: 123 VPTIFISPWIQRG 135
           VP   ISP+  RG
Sbjct: 394 VPCFVISPY-SRG 405


>sp|D7B6L8|MSHB_NOCDD 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
           deacetylase OS=Nocardiopsis dassonvillei (strain ATCC
           23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488)
           GN=mshB PE=3 SV=1
          Length = 282

 Score = 33.5 bits (75), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 27/123 (21%)

Query: 36  RYFD--LLSVPANDDHP----SHDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGF 89
           RY D  ++  P N+ HP      DV E    + +V   +R          +++YDEHGG 
Sbjct: 85  RYRDSGMMGAPTNE-HPRAFWGADVEEAATLLAQVIREVRPH-------VLVSYDEHGG- 135

Query: 90  YDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDG 149
           Y H          PD I         F R G R   +  +PW  R  + + +P  ++ + 
Sbjct: 136 YGH----------PDHIQAHRVARRAFLRAGERA--MPGTPWQVRKLYAIAQPVSRIEES 183

Query: 150 EAK 152
            A+
Sbjct: 184 IAR 186


>sp|B3EML3|Y2042_CHLPB UPF0747 protein Cphamn1_2042 OS=Chlorobium phaeobacteroides (strain
           BS1) GN=Cphamn1_2042 PE=3 SV=1
          Length = 563

 Score = 33.5 bits (75), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 91  DHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTL-KLRDG 149
           DHV      +  P +I     Y   ++  G+++P  FI P   RG+FTL EP + +  D 
Sbjct: 352 DHVLPTFAYIAGPGEISYMAQYRKTYEHFGLKMP--FIIP---RGSFTLIEPAVRRTMDK 406

Query: 150 EAKEDAKLTDFQQELVQMA 168
             ++  +LT  +++L   A
Sbjct: 407 VLQKTGRLTQSRKQLYHTA 425


>sp|Q98QK2|Y359_MYCPU DegV domain-containing protein MYPU_3590 OS=Mycoplasma pulmonis
           (strain UAB CTIP) GN=MYPU_3590 PE=4 SV=1
          Length = 288

 Score = 32.7 bits (73), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 142 PTLKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKD 178
           P +K  +GE  ++ K   FQ+ L ++ ++L+G Y KD
Sbjct: 184 PIIKFENGELLKEGKGISFQKTLTKLISSLSGKYSKD 220


>sp|D1A8M1|MSHB_THECD 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
           deacetylase OS=Thermomonospora curvata (strain ATCC
           19995 / DSM 43183 / JCM 3096 / NCIMB 10081) GN=mshB PE=3
           SV=1
          Length = 297

 Score = 32.3 bits (72), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 14/60 (23%)

Query: 40  LLSVPANDDHPS----HDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHG--GFYDHV 93
           ++  P+ND HP      DV E  + + E+   +R  PQ      I+TYDEHG  G  DH+
Sbjct: 99  MMGAPSND-HPRCFWRADVEEAARLLAEIIREVR--PQ-----VIVTYDEHGHYGHPDHI 150


>sp|Q1H4F2|CH60_METFK 60 kDa chaperonin OS=Methylobacillus flagellatus (strain KT / ATCC
           51484 / DSM 6875) GN=groL PE=3 SV=1
          Length = 544

 Score = 32.0 bits (71), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 18/128 (14%)

Query: 107 VGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELVQ 166
           +GP+  N   +R        F SP + +   ++ +  ++L D       KL +   +LV+
Sbjct: 31  LGPKGRNVVLERS-------FGSPTVTKDGVSVAKE-IELSD-------KLENMGAQLVK 75

Query: 167 MAATLNGDYKKD-IYPHKLVEEMTVAEGAKYVEDAFK--KFRGQCEKAEAEGVDESQIVV 223
             A+   D   D      ++ +  V EG KYV   F     +   +KA AE V+E + + 
Sbjct: 76  EVASKTNDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGIDKAVAEIVNEIKAIA 135

Query: 224 VPTPTTKQ 231
            PT T+K+
Sbjct: 136 KPTTTSKE 143


>sp|P67510|SYL_MYCTU Leucine--tRNA ligase OS=Mycobacterium tuberculosis GN=leuS PE=3
           SV=1
          Length = 969

 Score = 31.6 bits (70), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 99  GVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEP--TLKLRDGEAKEDAK 156
           GVP  DD     P       L  R+   +   W + GTF +P P  +L   DG A  D K
Sbjct: 11  GVPRADDADSDVPRYRYTAELAARLERTWQENWARLGTFNVPNPVGSLAPPDGAAVPDDK 70

Query: 157 LTDFQQEL 164
           L  F Q++
Sbjct: 71  L--FVQDM 76


>sp|A5TYB2|SYL_MYCTA Leucine--tRNA ligase OS=Mycobacterium tuberculosis (strain ATCC
           25177 / H37Ra) GN=leuS PE=3 SV=1
          Length = 969

 Score = 31.6 bits (70), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 99  GVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEP--TLKLRDGEAKEDAK 156
           GVP  DD     P       L  R+   +   W + GTF +P P  +L   DG A  D K
Sbjct: 11  GVPRADDADSDVPRYRYTAELAARLERTWQENWARLGTFNVPNPVGSLAPPDGAAVPDDK 70

Query: 157 LTDFQQEL 164
           L  F Q++
Sbjct: 71  L--FVQDM 76


>sp|C1AJ38|SYL_MYCBT Leucine--tRNA ligase OS=Mycobacterium bovis (strain BCG / Tokyo 172
           / ATCC 35737 / TMC 1019) GN=leuS PE=3 SV=1
          Length = 969

 Score = 31.6 bits (70), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 99  GVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEP--TLKLRDGEAKEDAK 156
           GVP  DD     P       L  R+   +   W + GTF +P P  +L   DG A  D K
Sbjct: 11  GVPRADDADSDVPRYRYTAELAARLERTWQENWARLGTFNVPNPVGSLAPPDGAAVPDDK 70

Query: 157 LTDFQQEL 164
           L  F Q++
Sbjct: 71  L--FVQDM 76


>sp|A1KEK9|SYL_MYCBP Leucine--tRNA ligase OS=Mycobacterium bovis (strain BCG / Pasteur
           1173P2) GN=leuS PE=3 SV=1
          Length = 969

 Score = 31.6 bits (70), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 99  GVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEP--TLKLRDGEAKEDAK 156
           GVP  DD     P       L  R+   +   W + GTF +P P  +L   DG A  D K
Sbjct: 11  GVPRADDADSDVPRYRYTAELAARLERTWQENWARLGTFNVPNPVGSLAPPDGAAVPDDK 70

Query: 157 LTDFQQEL 164
           L  F Q++
Sbjct: 71  L--FVQDM 76


>sp|P67511|SYL_MYCBO Leucine--tRNA ligase OS=Mycobacterium bovis (strain ATCC BAA-935 /
           AF2122/97) GN=leuS PE=3 SV=1
          Length = 969

 Score = 31.6 bits (70), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 99  GVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEP--TLKLRDGEAKEDAK 156
           GVP  DD     P       L  R+   +   W + GTF +P P  +L   DG A  D K
Sbjct: 11  GVPRADDADSDVPRYRYTAELAARLERTWQENWARLGTFNVPNPVGSLAPPDGAAVPDDK 70

Query: 157 LTDFQQEL 164
           L  F Q++
Sbjct: 71  L--FVQDM 76


>sp|O75106|AOC2_HUMAN Retina-specific copper amine oxidase OS=Homo sapiens GN=AOC2 PE=1
           SV=2
          Length = 756

 Score = 31.2 bits (69), Expect = 7.0,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 10  HFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDH 49
           H H F  HFK D +   L N+VV E   F  ++ P N +H
Sbjct: 516 HTHAF--HFKLDLDVAGLKNWVVAEDVVFKPVAAPWNPEH 553


>sp|Q21BY5|SECA_RHOPB Protein translocase subunit SecA OS=Rhodopseudomonas palustris
           (strain BisB18) GN=secA PE=3 SV=1
          Length = 947

 Score = 31.2 bits (69), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 13/89 (14%)

Query: 106 IVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELV 165
           I G +  +    RLG++     I PWI +           L   + K +A+  D ++ L+
Sbjct: 637 IFGSDRLDTMLTRLGLKEGEAIIHPWINKA----------LEKAQQKVEARNFDIRKNLL 686

Query: 166 QMAATLNGDYKKDIYPHK--LVEEMTVAE 192
           +     N D +K+I+ H+  L+++ +VAE
Sbjct: 687 KFDNVQN-DQRKEIFDHRISLMKDDSVAE 714


>sp|B1VG60|FPG_CORU7 Formamidopyrimidine-DNA glycosylase OS=Corynebacterium urealyticum
           (strain ATCC 43042 / DSM 7109) GN=mutM PE=3 SV=1
          Length = 289

 Score = 30.8 bits (68), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 71/214 (33%), Gaps = 45/214 (21%)

Query: 42  SVPANDDHPSHDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVP 101
           ++P      S  V  G+K +   +   R+  QW   +  +  D HGGF        TGVP
Sbjct: 92  ALPTTHVRISARVDVGEKDLVLSFVDQRTFGQWQ--VTPVVADPHGGF--------TGVP 141

Query: 102 SPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKE-DAKLTDF 160
            P   + P+P+   FD                        P +  R   AK+ D K    
Sbjct: 142 VPVAHIAPDPFEAVFD------------------------PAVVARRLRAKKTDVKRAIL 177

Query: 161 QQELVQMAATLNGD---YKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEG-- 215
            Q LV     +  D   +   + P +    M   +    +E A    R    +A A+G  
Sbjct: 178 DQTLVSGIGNIYADEALWAAGVAPSRRTRGMRQRDAVAVLEQAGAVMR----RALAQGGT 233

Query: 216 -VDESQIVVVPTPTTKQRKSKSFGRKLLSCLACN 248
             D   + V        R   ++GR    C  C 
Sbjct: 234 SFDSLYVNVNGASGYFARSLNAYGRAGKPCPRCG 267


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.137    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,169,481
Number of Sequences: 539616
Number of extensions: 4787306
Number of successful extensions: 10501
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 10485
Number of HSP's gapped (non-prelim): 26
length of query: 249
length of database: 191,569,459
effective HSP length: 115
effective length of query: 134
effective length of database: 129,513,619
effective search space: 17354824946
effective search space used: 17354824946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)