Query 042607
Match_columns 249
No_of_seqs 218 out of 752
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 13:31:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042607.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042607hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d1g_A Acid phosphatase; ACPA, 100.0 2.6E-37 8.8E-42 299.7 12.1 147 11-177 320-474 (498)
2 3lxq_A Uncharacterized protein 97.0 0.004 1.4E-07 57.4 10.9 64 54-138 275-338 (450)
3 4fdi_A N-acetylgalactosamine-6 96.3 0.013 4.6E-07 55.1 8.9 78 53-138 231-310 (502)
4 2qzu_A Putative sulfatase YIDJ 95.7 0.014 4.8E-07 54.5 6.2 68 54-137 283-350 (491)
5 3ed4_A Arylsulfatase; structur 95.4 0.02 7E-07 53.1 6.0 80 54-137 274-356 (502)
6 3b5q_A Putative sulfatase YIDJ 95.2 0.024 8.3E-07 53.2 5.8 68 54-137 254-323 (482)
7 2vqr_A Putative sulfatase; pho 94.9 0.035 1.2E-06 52.4 6.0 68 54-137 323-392 (543)
8 1fsu_A N-acetylgalactosamine-4 94.8 0.069 2.4E-06 49.9 7.8 73 54-138 229-303 (492)
9 1p49_A Steryl-sulfatase; stero 94.1 0.088 3E-06 50.2 6.9 80 53-137 290-372 (562)
10 1auk_A Arylsulfatase A; cerebr 93.9 0.12 4.1E-06 48.5 7.2 76 53-137 232-309 (489)
11 1hdh_A Arylsulfatase; hydrolas 93.8 0.066 2.3E-06 50.4 5.4 34 54-88 287-320 (536)
12 2w8d_A Processed glycerol phos 92.8 0.23 7.9E-06 45.8 7.3 73 54-137 228-303 (436)
13 2w5q_A Processed glycerol phos 92.4 0.21 7.2E-06 45.9 6.4 73 54-137 228-302 (424)
14 3m7v_A Phosphopentomutase; str 91.8 0.25 8.5E-06 42.9 5.8 76 53-169 315-390 (413)
15 2w5v_A Alkaline phosphatase; p 85.8 0.69 2.4E-05 41.8 4.4 34 53-89 273-307 (375)
16 4a3u_A NCR, NADH\:flavin oxido 74.5 1.5 5E-05 40.2 2.5 38 182-223 136-173 (358)
17 2i09_A Phosphopentomutase; str 65.7 7.5 0.00026 36.9 5.3 87 17-135 275-368 (403)
18 4gbu_A NADPH dehydrogenase 1; 65.3 3.6 0.00012 38.2 3.0 36 184-223 158-193 (400)
19 3igz_B Cofactor-independent ph 63.3 13 0.00044 36.8 6.6 118 18-169 405-537 (561)
20 3l5l_A Xenobiotic reductase A; 58.7 5.7 0.00019 36.3 3.0 36 184-223 144-179 (363)
21 4ab4_A Xenobiotic reductase B; 58.0 6.6 0.00022 36.2 3.3 37 183-223 138-174 (362)
22 2zkt_A 2,3-bisphosphoglycerate 57.7 10 0.00035 35.5 4.6 56 54-137 320-375 (412)
23 3l5a_A NADH/flavin oxidoreduct 57.1 5.5 0.00019 37.4 2.7 36 184-223 156-191 (419)
24 3gka_A N-ethylmaleimide reduct 56.8 6.6 0.00023 36.2 3.1 37 183-223 146-182 (361)
25 3hgj_A Chromate reductase; TIM 56.7 6.5 0.00022 35.6 3.0 36 184-223 138-173 (349)
26 3gr7_A NADPH dehydrogenase; fl 55.3 7 0.00024 35.4 3.0 36 184-223 130-165 (340)
27 3kru_A NADH:flavin oxidoreduct 53.3 9.8 0.00034 34.7 3.7 35 184-222 129-163 (343)
28 1o98_A 2,3-bisphosphoglycerate 52.8 16 0.00053 35.6 5.1 59 54-132 418-476 (511)
29 1z41_A YQJM, probable NADH-dep 52.4 11 0.00037 33.8 3.8 36 184-223 130-165 (338)
30 2gso_A Phosphodiesterase-nucle 52.0 8.6 0.0003 34.2 3.0 35 53-88 187-221 (393)
31 2x98_A Alkaline phosphatase; h 48.4 15 0.00051 34.8 4.2 27 61-89 282-309 (431)
32 2hsa_B 12-oxophytodienoate red 47.3 10 0.00035 35.3 2.8 36 184-223 157-192 (402)
33 1vyr_A Pentaerythritol tetrani 46.1 14 0.00049 33.7 3.6 36 184-223 147-182 (364)
34 3tjl_A NADPH dehydrogenase; OL 44.5 11 0.00039 35.5 2.6 37 184-224 153-190 (407)
35 1icp_A OPR1, 12-oxophytodienoa 44.3 14 0.00046 34.1 3.1 36 184-223 153-188 (376)
36 3a52_A Cold-active alkaline ph 44.2 13 0.00045 34.8 3.0 34 53-89 241-275 (400)
37 2gou_A Oxidoreductase, FMN-bin 43.7 14 0.00046 33.9 3.0 35 184-222 147-181 (365)
38 3k30_A Histamine dehydrogenase 39.9 15 0.00052 35.7 2.8 35 184-222 142-176 (690)
39 2r14_A Morphinone reductase; H 39.7 15 0.00051 33.8 2.6 36 184-223 152-187 (377)
40 3aty_A Tcoye, prostaglandin F2 35.8 21 0.00072 32.9 2.9 36 184-223 159-196 (379)
41 3ot9_A Phosphopentomutase; alk 35.6 34 0.0012 32.3 4.3 56 54-136 307-362 (399)
42 1ps9_A 2,4-dienoyl-COA reducta 33.9 29 0.001 33.5 3.8 35 184-222 127-161 (671)
43 1o94_A Tmadh, trimethylamine d 32.5 25 0.00084 34.7 3.0 36 184-223 135-170 (729)
44 3nkq_A Ectonucleotide pyrophos 29.5 43 0.0015 34.1 4.3 33 53-85 292-324 (831)
45 1ujo_A Transgelin; CH domain, 27.0 1.1E+02 0.0038 24.3 5.5 51 164-223 46-97 (144)
46 3e2d_A Alkaline phosphatase; c 25.2 62 0.0021 31.5 4.3 34 53-89 287-321 (502)
47 1p2x_A RNG2 protein, RAS GTPas 21.8 1.2E+02 0.004 24.6 4.8 49 164-223 44-92 (159)
48 1wym_A Transgelin-2; CH domain 21.7 1.5E+02 0.005 23.9 5.4 50 164-223 54-104 (155)
49 1ivn_A Thioesterase I; hydrola 21.4 2.6E+02 0.009 21.2 6.7 54 17-82 53-106 (190)
50 1cvr_A Gingipain R, RGPB; casp 20.9 1.2E+02 0.004 28.6 5.2 42 50-91 114-158 (435)
51 2luz_A CALU16; structural geno 20.9 2.2E+02 0.0076 23.4 6.4 47 159-205 138-185 (192)
52 3i6x_A P195, RAS GTPase-activa 20.8 82 0.0028 26.6 3.7 57 159-223 69-137 (193)
53 1h67_A Calponin alpha; cytoske 20.7 1.5E+02 0.005 22.3 4.8 48 164-223 34-81 (108)
No 1
>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp}
Probab=100.00 E-value=2.6e-37 Score=299.71 Aligned_cols=147 Identities=18% Similarity=0.356 Sum_probs=123.0
Q ss_pred cCcchHhHHHHHhcCCCCCeEEEeccccCCCCCCCCCCCCC-CChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCc
Q 042607 11 FHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPS-HDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGF 89 (249)
Q Consensus 11 f~~~~~~F~~D~~~G~LP~vSfI~P~~~d~~~~~~nd~HP~-~dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGf 89 (249)
++.++ +|++|+++|+||+||||+|+++ +|+||+ +++.+|++||++||++|++||+|++|||||||||+|||
T Consensus 320 ~~~l~-~F~~d~~~g~LP~vs~i~p~~~-------~d~Hp~~~~~~~g~~~v~~v~~al~~sp~W~~T~iiit~DE~~G~ 391 (498)
T 2d1g_A 320 QYDIS-EFWKALDQNNMPAVSYLKAPGY-------QDGHGGYSNPLDEQEWLVNTINRIQQSKDWDSTAIIIIYDDSDGD 391 (498)
T ss_dssp EEEHH-HHHHHHHTTCCCSEEEEECCGG-------GSCCTTTCCHHHHHHHHHHHHHHHHTSTTGGGEEEEEEESCCTTC
T ss_pred cCCHH-HHHHHHHcCCCCceEEEEcCCC-------CCCCCCCCChHHHHHHHHHHHHHHhcCccccCcEEEEEEECCCCC
Confidence 34455 8999999999999999999875 699999 58999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCCCCCeEec----Cccccc-cccCCcccCCCCCcc-HHH
Q 042607 90 YDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTL----PEPTLK-LRDGEAKEDAKLTDF-QQE 163 (249)
Q Consensus 90 yDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~k~G~V~~----~~~vl~-lr~~~~~~~~~ls~~-~~~ 163 (249)
||||+||..+. .| .+++.|+|.|||+||||||+|+|+|.. ++|||| |+...+ .+.|+.| +++
T Consensus 392 ~DHV~pP~~p~---~G-------~~~~~GlG~RVP~~viSP~~k~G~V~~~~~dH~Silrtie~~~g--l~~l~~~~~da 459 (498)
T 2d1g_A 392 YDHVYSPKSQF---SD-------IKGRQGYGPRLPMLVISPYAKANYVDHSLLNQASVLKFIEYNWG--IGSVSKYSNDK 459 (498)
T ss_dssp CCCCCCCCCTT---TT-------STTCCCCCCBCCEEEESTTBCTTEEECCCEETHHHHHHHHHHHT--CCCSCTTCGGG
T ss_pred ccCcCCCCcCC---CC-------ccCccCCCCcceEEEecCCCCCCceeCCccchhHHHHHHHHHhC--CCCCCcccccc
Confidence 99999998742 23 234468899999999999999999974 588866 665332 3378887 445
Q ss_pred HH-HHhhhhcCCCCC
Q 042607 164 LV-QMAATLNGDYKK 177 (249)
Q Consensus 164 l~-~la~~l~~~~~~ 177 (249)
.+ +|+++|++....
T Consensus 460 ~a~~l~~~F~F~~~p 474 (498)
T 2d1g_A 460 YSNNILNMFDFNKEQ 474 (498)
T ss_dssp GCCCSGGGBCSSCSS
T ss_pred cccCHHHHhCCCCCC
Confidence 44 899999998853
No 2
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus}
Probab=97.02 E-value=0.004 Score=57.40 Aligned_cols=64 Identities=16% Similarity=0.286 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCCC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQ 133 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~k 133 (249)
+..-|..|++++++|.+.+.|++|+||||=|=+..++.|-. ....+.|||+|+..|-++
T Consensus 275 v~~~D~~ig~~l~~L~~~g~~~nTlvI~tsDHG~~~~~~~~---------------------~~~~~~~vP~ii~~p~~~ 333 (450)
T 3lxq_A 275 VKYSDYALGTFFDKAKKSSYWDDTIFIVIADHDARVFGANL---------------------VPVKHFHIPALIIGKDIQ 333 (450)
T ss_dssp HHHHHHHHHHHHHHHTTSSSGGGEEEEEEESCCSCCCSCCS---------------------CCGGGGEECEEEECTTCC
T ss_pred HHHHHHHHHHHHHHHHhCCCcCCeEEEEECCCCcccCCCCC---------------------CccccceEeEEEECCCCC
Confidence 67789999999999999999999999998774433333210 012378999999999888
Q ss_pred CCeEe
Q 042607 134 RGTFT 138 (249)
Q Consensus 134 ~G~V~ 138 (249)
++.++
T Consensus 334 ~~~~~ 338 (450)
T 3lxq_A 334 PRKDD 338 (450)
T ss_dssp CEEEC
T ss_pred CceeC
Confidence 76654
No 3
>4fdi_A N-acetylgalactosamine-6-sulfatase; glycoprotein, enzyme replacement therapy, formylg N-linked glycosylation, lysosomal enzyme, hydrolase; HET: NAG CIT; 2.20A {Homo sapiens} PDB: 4fdj_A*
Probab=96.28 E-value=0.013 Score=55.07 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=51.3
Q ss_pred ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCCCCCcCceeeEEEccC
Q 042607 53 DVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEP-YNFKFDRLGVRVPTIFISPW 131 (249)
Q Consensus 53 dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~~~p~pDg~~g~~p-~~f~f~~lG~RVP~ivISPw 131 (249)
.|..=|..|.+|+++|.+...|++|+||+|=|=++.+..|- .. .|..|+.. ......-.|.|||+||-.|-
T Consensus 231 ~v~~~D~~vG~il~~L~~~gl~dnTiViftSDhG~~~~~~~---~~-----~g~~g~~~~~K~~~~E~g~rVPlii~~Pg 302 (502)
T 4fdi_A 231 AVREIDDSIGKILELLQDLHVADNTFVFFTSDNGAALISAP---EQ-----GGSNGPFLCGKQTTFEGGMREPALAWWPG 302 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCTTSTT---TS-----CCCCTTSSCCTTSSSHHHHBCCEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcCceEEEecCCCccccccc---cc-----cCccCCCCCCCcccccCcccCcccccCCC
Confidence 36667999999999999999999999999876544332220 00 01111110 01122235899999999995
Q ss_pred -CCCCeEe
Q 042607 132 -IQRGTFT 138 (249)
Q Consensus 132 -~k~G~V~ 138 (249)
+++|.|.
T Consensus 303 ~~~~g~~~ 310 (502)
T 4fdi_A 303 HVTAGQVS 310 (502)
T ss_dssp TSCTTEEC
T ss_pred ccCCCcee
Confidence 5778774
No 4
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis}
Probab=95.73 E-value=0.014 Score=54.52 Aligned_cols=68 Identities=19% Similarity=0.223 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCCC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQ 133 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~k 133 (249)
+..-|..|.+++++|.+...|++|+||+|=|=+..+.+| |..+. ......|.|||+||..|-..
T Consensus 283 v~~~D~~iG~ll~~L~~~g~~dnTiIiftSDHG~~~g~~------------g~~~K----~~~~e~~~rVPlii~~Pg~~ 346 (491)
T 2qzu_A 283 ITGVDENVGRIIEALKQNNLFDNTIVVFTSDHGICMGAH------------ENAGK----DIFYEESMRIPMILSWPDQI 346 (491)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSTTEEEEEECSCCCCTTGG------------GCSSC----CSSSHHHHBCCEEEECTTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCcCCeEEEEECcCCcccccc------------cCCCC----CCccccccccCeEEECCCCC
Confidence 445678899999999999999999999987743322233 11111 01123489999999999776
Q ss_pred CCeE
Q 042607 134 RGTF 137 (249)
Q Consensus 134 ~G~V 137 (249)
+|.+
T Consensus 347 ~g~~ 350 (491)
T 2qzu_A 347 KPRK 350 (491)
T ss_dssp CCEE
T ss_pred CCce
Confidence 6754
No 5
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli}
Probab=95.39 E-value=0.02 Score=53.10 Aligned_cols=80 Identities=19% Similarity=0.212 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCC--CCCCCCCCCCCCCCCCCCCCCcCceeeEEEccC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVT--GVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPW 131 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~--~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw 131 (249)
+..-|..|.+++++|.++..|++|+||+|=| ||+....-..+.. ......+..|. .......|.|||+||-.|-
T Consensus 274 i~~~D~~iG~ll~~L~~~g~~dnTlVIftSD-HG~~~~~~~~~~~~~~~g~~~~~~g~---k~~~~e~~~rVPlii~~Pg 349 (502)
T 3ed4_A 274 ISYLDAQVGKVLDKIKAMGEEDNTIVIFTSD-NGPVTREARKVYELNLAGETDGLRGR---KDNLWEGGIRVPAIIKYGK 349 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEEEEEEES-SCCCCSCCCSGGGTTCCCCCTTCSCC---TTCCSHHHHBCCEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHcCCcCCeEEEEeCC-CCCCccccccccccccccCCCcccCC---CCCccCcceEeeEEEEeCC
Confidence 5566899999999999999999999999865 5542110000000 00000011110 1112235889999999997
Q ss_pred -CCCCeE
Q 042607 132 -IQRGTF 137 (249)
Q Consensus 132 -~k~G~V 137 (249)
+++|.+
T Consensus 350 ~i~~g~~ 356 (502)
T 3ed4_A 350 HLPQGMV 356 (502)
T ss_dssp SSCTTEE
T ss_pred cCCCCCE
Confidence 788876
No 6
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.17 E-value=0.024 Score=53.16 Aligned_cols=68 Identities=29% Similarity=0.372 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCC-ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGG-FYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWI 132 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GG-fyDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~ 132 (249)
+..-|..|.+++++|.+...|++|+||+|=| ||. +.+| |..|.. ......|.|||+||-.|-.
T Consensus 254 i~~~D~~vG~ll~~L~~~g~~dnTiVIftSD-HG~~~g~~------------g~~gk~---~~~~e~~~rVPlii~~Pg~ 317 (482)
T 3b5q_A 254 TKMVSKQVDSVLKALYSTPAGRNTIVVIMAD-HGDGMASH------------RMVTKH---ISFYDEMTNVPFIFAGPGI 317 (482)
T ss_dssp HHHHHHHHHHHHHHHTTSTTGGGEEEEEEES-CCCCTTGG------------GCCSCS---SCCCHHHHBCCEEEESTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCcCCeEEEEECC-CCcccccc------------cccccC---CccccccceeeEEEECCCC
Confidence 4455778999999999999999999999877 543 3233 112211 0112358999999999976
Q ss_pred CC-CeE
Q 042607 133 QR-GTF 137 (249)
Q Consensus 133 k~-G~V 137 (249)
.+ |.+
T Consensus 318 ~~~g~~ 323 (482)
T 3b5q_A 318 KQQKKP 323 (482)
T ss_dssp CCCSSC
T ss_pred CCCCcE
Confidence 54 644
No 7
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase, plasmid, formylglycine, phosphodiesterase; 1.42A {Rhizobium leguminosarum BV} PDB: 2w8s_A
Probab=94.86 E-value=0.035 Score=52.43 Aligned_cols=68 Identities=22% Similarity=0.450 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCCC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQ 133 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~k 133 (249)
+..-|..|.+++++|.+...|++|+||+|=|=+..+-+|- ..+. ......|.|||+||-.|-..
T Consensus 323 i~~~D~~iG~ll~~L~~~gl~dnTiIiftSDHG~~~g~~~------------~~~K----~~~~e~~~rVPlii~~P~~~ 386 (543)
T 2vqr_A 323 ITEVDDCLGRVFSYLDETGQWDDTLIIFTSDHGEQLGDHH------------LLGK----IGYNDPSFRIPLVIKDAGEN 386 (543)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCCCTTGGG------------CCSS----CSSCHHHHBCCEEEECSSSC
T ss_pred HHHHHHHHHHHHHHHHhcCCcCCeEEEEECcCCccccccc------------cccC----cCcccccceeeEEEEeCCcc
Confidence 4556888999999999999999999999966433333441 1111 01123589999999999765
Q ss_pred --CCeE
Q 042607 134 --RGTF 137 (249)
Q Consensus 134 --~G~V 137 (249)
+|.+
T Consensus 387 ~~~g~~ 392 (543)
T 2vqr_A 387 ARAGAI 392 (543)
T ss_dssp TTTTCE
T ss_pred ccCCcc
Confidence 5654
No 8
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2
Probab=94.83 E-value=0.069 Score=49.92 Aligned_cols=73 Identities=32% Similarity=0.373 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCcc-ccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFY-DHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWI 132 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfy-DHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~ 132 (249)
|..-|..|.+++++|.+...|++|+||+|=| ||+.. .|-. . -...|. .......|.|||+||-.|-.
T Consensus 229 v~~~D~~vG~ll~~L~~~g~~dnTiviftSD-hG~~~~~~~~------~--~~l~g~---K~~~~e~~~rVPlii~~P~~ 296 (492)
T 1fsu_A 229 VSLMDEAVGNVTAALKSSGLWNNTVFIFSTD-NGGQTLAGGN------N--WPLRGR---KWSLWEGGVRGVGFVASPLL 296 (492)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEEEEEEES-SCCCGGGTCC------C--TTSSCC---TTSSSHHHHBCCEEEECTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCccCEEEEEECC-CCCCccCCCC------C--CCcCCC---CCCccCCCeeeEEEEECCCc
Confidence 5567889999999999999999999999877 44432 2200 0 001111 01122358999999999975
Q ss_pred -CCCeEe
Q 042607 133 -QRGTFT 138 (249)
Q Consensus 133 -k~G~V~ 138 (249)
++|.+.
T Consensus 297 ~~~g~~~ 303 (492)
T 1fsu_A 297 KQKGVKN 303 (492)
T ss_dssp SSCSEEE
T ss_pred CCCCcee
Confidence 457653
No 9
>1p49_A Steryl-sulfatase; steroid biosynthesis, steroid sulfatase, estrone sulfate, dehydroepiandrosterone sulfate, human placental enzyme; HET: ALS BOG NAG; 2.60A {Homo sapiens} SCOP: c.76.1.2
Probab=94.12 E-value=0.088 Score=50.20 Aligned_cols=80 Identities=24% Similarity=0.165 Sum_probs=49.5
Q ss_pred ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCcc-ccCCCCCCCCCCCCCCCCCCC-CCCCCCCCcCceeeEEEcc
Q 042607 53 DVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFY-DHVPTPVTGVPSPDDIVGPEP-YNFKFDRLGVRVPTIFISP 130 (249)
Q Consensus 53 dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfy-DHV~PP~~~~p~pDg~~g~~p-~~f~f~~lG~RVP~ivISP 130 (249)
.|..-|..|.+++++|.+...|++|+||+|=| ||+.. +|-..-.. -.+..|+.. ........|.|||+||-.|
T Consensus 290 ~v~~~D~~vG~il~~L~~~g~~dnTiviftsD-hG~~~~~~~~~~~~----~g~~~~~~~g~K~~~~e~~~rvP~ii~~P 364 (562)
T 1p49_A 290 AVEEMDWSVGQILNLLDELRLANDTLIYFTSD-QGAHVEEVSSKGEI----HGGSNGIYKGGKANNWEGGIRVPGILRWP 364 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEES-SCCCTTCBCSSSCB----CSCCCTTCCCCTTSSSHHHHCCCEEEECT
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCeEEEEECC-CCcccccccccccc----cCccCCCccCCccCccCCceEEeEEEecC
Confidence 46677899999999999999999999999877 55432 22000000 001111100 0011123589999999999
Q ss_pred C-CCCCeE
Q 042607 131 W-IQRGTF 137 (249)
Q Consensus 131 w-~k~G~V 137 (249)
- +++|.+
T Consensus 365 ~~~~~g~~ 372 (562)
T 1p49_A 365 RVIQAGQK 372 (562)
T ss_dssp TTSCTTCE
T ss_pred CcCCCCce
Confidence 7 677765
No 10
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P*
Probab=93.86 E-value=0.12 Score=48.53 Aligned_cols=76 Identities=22% Similarity=0.126 Sum_probs=48.3
Q ss_pred ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCCCCCcCceeeEEEccC
Q 042607 53 DVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEP-YNFKFDRLGVRVPTIFISPW 131 (249)
Q Consensus 53 dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~~~p~pDg~~g~~p-~~f~f~~lG~RVP~ivISPw 131 (249)
.|..-|..|.+++++|.+...|++|+||+|=| ||+..... .. .|..|+.. ........|.|||+||-.|-
T Consensus 232 ~v~~~D~~vG~ll~~L~~~gl~dnTiViftSD-hG~~~~~~--~~------~g~~g~~~~~K~~~~e~g~rVPlii~~Pg 302 (489)
T 1auk_A 232 SLMELDAAVGTLMTAIGDLGLLEETLVIFTAD-NGPETMRM--SR------GGCSGLLRCGKGTTYEGGVREPALAFWPG 302 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEES-SCCCGGGG--GG------SCCCTTSCCCTTSSSHHHHBCCCEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCeEEEEeCC-CCcccccc--CC------CCcccccCCCccCccCCceeEEEEEecCC
Confidence 35667889999999999999999999999866 55432100 00 01111100 00112235899999999997
Q ss_pred -CCCCeE
Q 042607 132 -IQRGTF 137 (249)
Q Consensus 132 -~k~G~V 137 (249)
+++|.+
T Consensus 303 ~i~~g~~ 309 (489)
T 1auk_A 303 HIAPGVT 309 (489)
T ss_dssp TSCSEEE
T ss_pred CCCCCcc
Confidence 677733
No 11
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A {Pseudomonas aeruginosa} SCOP: c.76.1.2
Probab=93.81 E-value=0.066 Score=50.39 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGG 88 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GG 88 (249)
|..-|..|.+|+++|.++..|++|+||+|=| ||+
T Consensus 287 v~~~D~~iG~ll~~L~~~g~~dnTiIiftSD-hG~ 320 (536)
T 1hdh_A 287 VERMDWNIGRVVDYLRRQGELDNTFVLFMSD-NGA 320 (536)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEEEEEEES-SSC
T ss_pred HHHHHHHHHHHHHHHHHcCCcCCeEEEEECc-CCC
Confidence 3456778999999999999999999999877 554
No 12
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis}
Probab=92.82 E-value=0.23 Score=45.84 Aligned_cols=73 Identities=14% Similarity=0.270 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCc-cccCCCCCCCCCCCCCCCCCCCCCCCCCCCc--CceeeEEEcc
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGF-YDHVPTPVTGVPSPDDIVGPEPYNFKFDRLG--VRVPTIFISP 130 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGf-yDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG--~RVP~ivISP 130 (249)
+..-|..|++++++|.++..|++|+||+|=| |||. .+|-. .-.+..|... ...+ ..| .|||+||-.|
T Consensus 228 v~~~D~~iG~ll~~Lk~~gl~dnTiIv~tsD-HG~~~~~~~~-------~~~~~~g~k~-~~~~-e~~~~~rVPlii~~P 297 (436)
T 2w8d_A 228 AHYLDQSIEQFFNDLKKDGLYDKSIIVMYGD-HYGISENHNK-------AMAKVLGKDE-ITDY-DNAQLQRVPLFIHAA 297 (436)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSTTEEEEEEEC-SCSSCGGGHH-------HHHHHTTCSC-CCHH-HHHHTTBCCEEEEET
T ss_pred HHHHHHHHHHHHHHHHhcCCcCCeEEEEECC-CCcccccchh-------hHHHhhCCCC-CCcc-cccccceEeEEEEeC
Confidence 5567889999999999999999999999766 5542 22300 0000111100 0001 124 7999999999
Q ss_pred CCCCCeE
Q 042607 131 WIQRGTF 137 (249)
Q Consensus 131 w~k~G~V 137 (249)
- ++|.+
T Consensus 298 g-~~g~~ 303 (436)
T 2w8d_A 298 G-VKGEK 303 (436)
T ss_dssp T-SCCCE
T ss_pred C-CCCce
Confidence 8 65654
No 13
>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase; transmembrane, cell WALL biogenesis/degradation, LTAS, membrane, secreted; 1.20A {Staphylococcus aureus} PDB: 2w5s_A* 2w5t_A* 2w5r_A*
Probab=92.43 E-value=0.21 Score=45.86 Aligned_cols=73 Identities=15% Similarity=0.127 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCc-cccCCCCCCCCCCCCCCCCCCCCCCCCCC-CcCceeeEEEccC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGF-YDHVPTPVTGVPSPDDIVGPEPYNFKFDR-LGVRVPTIFISPW 131 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGf-yDHV~PP~~~~p~pDg~~g~~p~~f~f~~-lG~RVP~ivISPw 131 (249)
+..-|..|++++++|.++..|++|+||+|=| |||. .+|-. .-.+..|.. ...+++ .+.|||+||-.|-
T Consensus 228 i~~~D~~iG~ll~~Lk~~g~~dnTiIVf~sD-HG~~~~~~~~-------~~~~~~g~k--~~~~e~~~~~rVPlii~~Pg 297 (424)
T 2w5q_A 228 ARYLDEALEEYINDLKKKGLYDNSVIMIYGD-HYGISENHNN-------AMEKLLGEK--ITPAKFTDLNRTGFWIKIPG 297 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSTTSEEEEEEC-SCSSCGGGHH-------HHHHHHTSC--CCHHHHHHTTBCCEEEECTT
T ss_pred HHHHHHHHHHHHHHHHhcCCcCCeEEEEECC-CCcccccchh-------hhhhhhCCC--CCccccccccceeEEEEeCC
Confidence 5667889999999999999999999998876 6652 22200 000011100 001111 1289999999998
Q ss_pred CCCCeE
Q 042607 132 IQRGTF 137 (249)
Q Consensus 132 ~k~G~V 137 (249)
++|.+
T Consensus 298 -~~g~~ 302 (424)
T 2w5q_A 298 -KSGGI 302 (424)
T ss_dssp -CCCEE
T ss_pred -CCCce
Confidence 56655
No 14
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=91.81 E-value=0.25 Score=42.93 Aligned_cols=76 Identities=22% Similarity=0.286 Sum_probs=48.9
Q ss_pred ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCC
Q 042607 53 DVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWI 132 (249)
Q Consensus 53 dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~ 132 (249)
.|..-|..|.+++++|. +||+||+|=| ||. .|. ..| ....|.|||+||-.|-+
T Consensus 315 ~i~~~D~~vg~~l~~L~-----entliiftsD-nG~------~~~--------~~~-------~~~~~~~vp~~~~~p~~ 367 (413)
T 3m7v_A 315 CLHEFDERLPEIIAAMK-----VDDLLLITAD-HGN------DPT--------YAG-------TDHTREYVPLLAYSPSF 367 (413)
T ss_dssp HHHHHHHHHHHHHHTCC-----TTEEEEEECS-SBC------CTT--------SSS-------SSCBCBCEEEEEECTTC
T ss_pred HHHHHHhHHHHHHHhcC-----CCCEEEEEcc-CCC------CCC--------CCC-------CCCCCeeEEEEEEECCC
Confidence 35666888999999986 6899999865 442 111 111 12358899999999976
Q ss_pred CCCeEecCccccccccCCcccCCCCCccHHHHHHHhh
Q 042607 133 QRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELVQMAA 169 (249)
Q Consensus 133 k~G~V~~~~~vl~lr~~~~~~~~~ls~~~~~l~~la~ 169 (249)
+++.+.... .+.++-+-+++|+.
T Consensus 368 ~~~~~~~~~--------------~~~d~~pt~~~~~g 390 (413)
T 3m7v_A 368 TGNGVLPVG--------------HYADISATIADNFG 390 (413)
T ss_dssp SCCEECCCE--------------ETTHHHHHHHHHHT
T ss_pred CCCCcCCCc--------------EEehHHHHHHHHcC
Confidence 655443211 34566666666664
No 15
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=85.84 E-value=0.69 Score=41.85 Aligned_cols=34 Identities=21% Similarity=0.406 Sum_probs=26.7
Q ss_pred ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCC-CCc
Q 042607 53 DVSEGQKFVKEVYEALRSSPQWNEILFIITYDEH-GGF 89 (249)
Q Consensus 53 dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~-GGf 89 (249)
.+..=|..|.+++++|..+. +|+||+|=|=+ ||+
T Consensus 273 ~v~~~D~~vG~il~~L~~~g---nTlviftsDhG~Gg~ 307 (375)
T 2w5v_A 273 EINDFDDAIGTALAFAKKDG---NTLVIVTSDHETGGF 307 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHS---SEEEEEECSCEETTC
T ss_pred HHHHHHHHHHHHHHHHhhCC---CEEEEEECcCCCCCc
Confidence 35556888999999999876 99999997742 554
No 16
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=74.49 E-value=1.5 Score=40.19 Aligned_cols=38 Identities=16% Similarity=0.280 Sum_probs=33.1
Q ss_pred cccCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 182 HKLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 182 ~~l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
...|+.||..| +++-++.|.+|++.|+++|.|.=+|-.
T Consensus 136 ~~~pr~mt~~e----I~~ii~~F~~AA~rA~~AGFDgVEIH~ 173 (358)
T 4a3u_A 136 YDVARALRLDE----IPRLLDDYEKAARHALKAGFDGVQIHA 173 (358)
T ss_dssp CCEEEECCGGG----HHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CccCccCCHHH----HHHHHHHHHHHHHHHHHcCCCeEeecc
Confidence 34688999999 788899999999999999999877755
No 17
>2i09_A Phosphopentomutase; structural genomics, target T1865, NYSGXRC, PSI, protein structure initiative; 2.00A {Streptococcus mutans} PDB: 3m7v_A
Probab=65.70 E-value=7.5 Score=36.88 Aligned_cols=87 Identities=23% Similarity=0.262 Sum_probs=49.9
Q ss_pred hHHHHHhc-CCCCCeEEEeccccCCCCCCCCCCCCCC------ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCc
Q 042607 17 HFKKDCEE-GKLPNYVVVEQRYFDLLSVPANDDHPSH------DVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGF 89 (249)
Q Consensus 17 ~F~~D~~~-G~LP~vSfI~P~~~d~~~~~~nd~HP~~------dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGf 89 (249)
...+.+++ +.-..+.|+.=.-.|. .-+|-.. -+..=|..|.+++++|.. +|+||||=|= |.
T Consensus 275 ~~i~~l~~~~~~~dfi~vn~~~~Dm-----~~GH~~d~~~y~~aIe~vD~~LG~Il~aL~~-----~tllIITADH-Gn- 342 (403)
T 2i09_A 275 TLIKTMGLSAFTKGFSFTNLVDFDA-----LYGHRRNAHGYRDCLHEFDERLPEIIAAMKV-----DDLLLITADH-GN- 342 (403)
T ss_dssp HHHHHHHCSSCCSEEEEEEECHHHH-----HTTTTTCHHHHHHHHHHHHHHHHHHHHTCCT-----TEEEEEECSS-BC-
T ss_pred HHHHHHHhcCCCCCEEEEEeccCCc-----ccCcCCCHHHHHHHHHHHHHHHHHHHHhhCC-----CCEEEEecCC-CC-
Confidence 45566666 4322677775111110 0135432 244457789999999874 7899888664 32
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCCCCC
Q 042607 90 YDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRG 135 (249)
Q Consensus 90 yDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~k~G 135 (249)
| |.. .+ .+....|||+|+.+|-.++|
T Consensus 343 -d----p~~--------~~-------t~HT~~~VPlIi~gpg~~~g 368 (403)
T 2i09_A 343 -D----PTY--------AG-------TDHTREYVPLLAYSPSFTGN 368 (403)
T ss_dssp -C----TTS--------SS-------SSCBCBCEEEEEECTTCSCC
T ss_pred -C----CCC--------CC-------cCCCCCceeEEEEECCCCCC
Confidence 1 111 00 11345799999999977655
No 18
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=65.26 E-value=3.6 Score=38.16 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=31.4
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|..||..| +++-++.|.+|++.|+++|.|.=+|-.
T Consensus 158 ~pr~mt~~e----I~~ii~~F~~AA~rA~~AGFDgVEIH~ 193 (400)
T 4gbu_A 158 PQHSLTKDE----IKQYIKEYVQAAKNSIAAGADGVEIHS 193 (400)
T ss_dssp CCEECCHHH----HHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCccCCHHH----HHHHHHHHHHHHHHHHhcCcCeeeecc
Confidence 477899999 778889999999999999999877643
No 19
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A
Probab=63.33 E-value=13 Score=36.82 Aligned_cols=118 Identities=14% Similarity=0.128 Sum_probs=62.8
Q ss_pred HHHHHhcCCCCCeEEEe---ccccCCCCCCCCCCCCCC------ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCC
Q 042607 18 FKKDCEEGKLPNYVVVE---QRYFDLLSVPANDDHPSH------DVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGG 88 (249)
Q Consensus 18 F~~D~~~G~LP~vSfI~---P~~~d~~~~~~nd~HP~~------dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GG 88 (249)
..+.+++++ +.+.++. |++ -+|-+. -+..=|..|.+++++|...- |+||||=| ||.
T Consensus 405 ~i~al~~~~-~DfI~vn~an~Dm---------vGHtGd~~a~~kAIE~vD~~LGrIl~aL~e~G----tiIIITAD-HGn 469 (561)
T 3igz_B 405 AIEALKSGM-YNVVRINFPNGDM---------VGHTGDLKATITGVEAVDESLAKLKDAVDSVN----GVYIVTAD-HGN 469 (561)
T ss_dssp HHHHHHHSC-CSEEEEEECHHHH---------HHTTTCHHHHHHHHHHHHHHHHHHHHHHHHTT----CEEEEECS-SBS
T ss_pred HHHHHHhCC-CCEEEEecCChhh---------hhcCCCHHHHHHHHHHHHHHHHHHHHHHHhCC----CEEEEEcC-CCC
Confidence 445555554 7888776 332 135332 24455788999999998753 78888765 443
Q ss_pred c---cccCCCCCCCCCCCCCCC--CCCCCCC-CCCCCcCceeeEEEccCCCCCeEecCccccccccCCcccCCCCCccHH
Q 042607 89 F---YDHVPTPVTGVPSPDDIV--GPEPYNF-KFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQ 162 (249)
Q Consensus 89 f---yDHV~PP~~~~p~pDg~~--g~~p~~f-~f~~lG~RVP~ivISPw~k~G~V~~~~~vl~lr~~~~~~~~~ls~~~~ 162 (249)
. .||- ..|.. |.....+ .....+.|||+|+.+|-.++|.....+ + +...|.+.-+
T Consensus 470 ~e~m~d~~---------~~G~plrg~KG~~~e~t~HT~~~VPlII~gPg~~~g~~l~~~----l------~~~sL~DIAP 530 (561)
T 3igz_B 470 SDDMAQRD---------KKGKPMKDGNGNVLPLTSHTLSPVPVFIGGAGLDPRVAMRTD----L------PAAGLANVTA 530 (561)
T ss_dssp TTCCBCBC---------TTCCBCBCTTSCBCBCCSCBCCCEEEEEECTTSCTTEEECSS----C------TTCBTHHHHH
T ss_pred chhccccc---------ccCCccccccccccccccccCceecEEEEcCCCCCCceeccc----c------CceeehHHHH
Confidence 2 2210 01110 0000000 122357899999999976655431100 0 0114566666
Q ss_pred HHHHHhh
Q 042607 163 ELVQMAA 169 (249)
Q Consensus 163 ~l~~la~ 169 (249)
-+++|+.
T Consensus 531 TILdL~G 537 (561)
T 3igz_B 531 TFINLLG 537 (561)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 6776663
No 20
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=58.74 E-value=5.7 Score=36.27 Aligned_cols=36 Identities=17% Similarity=0.312 Sum_probs=31.5
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 144 ~p~~mt~~e----I~~ii~~f~~aA~~a~~aGfDgVEih~ 179 (363)
T 3l5l_A 144 VPREMTLDD----IARVKQDFVDAARRARDAGFEWIELHF 179 (363)
T ss_dssp CCEECCHHH----HHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCccCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEEcc
Confidence 588999999 778899999999999999999766654
No 21
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=57.98 E-value=6.6 Score=36.25 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=31.8
Q ss_pred ccCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 183 KLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 183 ~l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
..|..||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 138 ~~pr~mt~~e----I~~ii~~f~~AA~~a~~aGfDgVEih~ 174 (362)
T 4ab4_A 138 PTPRALETEE----INDIVEAYRSGAENAKAAGFDGVEIHG 174 (362)
T ss_dssp CCCEECCHHH----HHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCcCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 3589999999 778889999999999999998766654
No 22
>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}
Probab=57.69 E-value=10 Score=35.47 Aligned_cols=56 Identities=14% Similarity=0.297 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCCC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQ 133 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~k 133 (249)
+..=|.++.+++++|+.. .++||||=|=+- |.. . .+..+.+||+|+.+|-++
T Consensus 320 ie~~D~~lg~ll~al~~~----~~~liitaDHG~--------p~~---~-------------~~Ht~~~VP~ii~g~~~~ 371 (412)
T 2zkt_A 320 IERADRMIGYILDHVDLE----EVVIAITGDHST--------PCE---V-------------MNHSGDPVPLLIAGGGVR 371 (412)
T ss_dssp HHHHHHHHHHHHTTSCTT----TEEEEEECSSBC--------CTT---T-------------TSCBCCCEEEEEESTTCC
T ss_pred HHHHHHHHHHHHHHHHhC----CCEEEEECCCCC--------CCC---C-------------CcCCCCceeEEEEeCCcC
Confidence 455677888888888665 488888765331 110 0 013478999999999877
Q ss_pred CCeE
Q 042607 134 RGTF 137 (249)
Q Consensus 134 ~G~V 137 (249)
+|.+
T Consensus 372 ~~~~ 375 (412)
T 2zkt_A 372 TDDT 375 (412)
T ss_dssp CCSC
T ss_pred CCcc
Confidence 6644
No 23
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=57.14 E-value=5.5 Score=37.45 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=31.7
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|..||..| +++-++.|.+|++.|+++|.|.=+|-.
T Consensus 156 ~pr~mt~~e----I~~ii~~F~~AA~rA~~AGfDgVEIH~ 191 (419)
T 3l5a_A 156 VVIAMSHEK----INSIIQQYRDATLRAIKAGFDGVEISI 191 (419)
T ss_dssp EEEECCHHH----HHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCccCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 588999999 778889999999999999999877654
No 24
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=56.81 E-value=6.6 Score=36.21 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=31.9
Q ss_pred ccCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 183 KLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 183 ~l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
..|..||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 146 ~~pr~mt~~e----I~~ii~~f~~AA~~A~~aGfDgVEih~ 182 (361)
T 3gka_A 146 VTPRALELDE----IPGVVAAFRRGAENARAAGFDGVEVHG 182 (361)
T ss_dssp CCCEECCGGG----HHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCccCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 3689999999 778889999999999999998766654
No 25
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=56.67 E-value=6.5 Score=35.61 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=31.2
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 138 ~p~~mt~~e----I~~ii~~f~~aA~~a~~aGfDgVEih~ 173 (349)
T 3hgj_A 138 VPEPLDEAG----MERILQAFVEGARRALRAGFQVIELHM 173 (349)
T ss_dssp CCEECCHHH----HHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCccCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 588999999 778889999999999999999766554
No 26
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=55.31 E-value=7 Score=35.44 Aligned_cols=36 Identities=28% Similarity=0.461 Sum_probs=31.5
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 130 ~p~~mt~~e----I~~ii~~f~~aA~~a~~aGfDgVEih~ 165 (340)
T 3gr7_A 130 TPKEMTKAD----IEETVQAFQNGARRAKEAGFDVIEIHA 165 (340)
T ss_dssp CCEECCHHH----HHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCccCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEEcc
Confidence 588999999 778889999999999999999766654
No 27
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=53.33 E-value=9.8 Score=34.71 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=31.7
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCee
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIV 222 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~ 222 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-
T Consensus 129 ~p~~mt~~e----I~~ii~~f~~AA~~a~~aGfDgVEih 163 (343)
T 3kru_A 129 LPRELSVEE----IKSIVKAFGEAAKRANLAGYDVVEIH 163 (343)
T ss_dssp CCEECCHHH----HHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CchhcCHHH----HHHHHHHHHHHHhhccccCCceEEEe
Confidence 588999999 78889999999999999999987776
No 28
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=52.79 E-value=16 Score=35.63 Aligned_cols=59 Identities=25% Similarity=0.268 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWI 132 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~ 132 (249)
+..=|..|.+++++|.... |+||||=| ||....-.. | .|.. .....|.|||+|+.+|-+
T Consensus 418 Ie~vD~~lGrll~~Lk~~g----TlIIiTSD-HG~~e~m~d-~-------~Gk~-------~t~ht~~~VPlIi~~pgi 476 (511)
T 1o98_A 418 VEAVDECLGKVVDAILAKG----GIAIITAD-HGNADEVLT-P-------DGKP-------QTAHTTNPVPVIVTKKGI 476 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTT----CEEEEECS-SBSTTCCBC-T-------TSCB-------CCSCBCCCEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHHCC----CEEEEECC-CCccccccC-C-------CCCc-------ccCCCCeEEEEEEEECCc
Confidence 5556888999999998763 88888765 554211000 0 1110 012358999999999864
No 29
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=52.37 E-value=11 Score=33.85 Aligned_cols=36 Identities=22% Similarity=0.401 Sum_probs=31.3
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|+.||..| +++.++.|.++++.|+++|.|.=+|-.
T Consensus 130 ~p~~mt~~e----I~~~i~~~~~aA~~a~~aGfDgVeih~ 165 (338)
T 1z41_A 130 TPVEMSAEK----VKETVQEFKQAAARAKEAGFDVIEIHA 165 (338)
T ss_dssp CCEECCHHH----HHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCccCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEecc
Confidence 588899999 778899999999999999998877644
No 30
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP, hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A 2gsu_A* 2rh6_A*
Probab=52.03 E-value=8.6 Score=34.22 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=29.8
Q ss_pred ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCC
Q 042607 53 DVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGG 88 (249)
Q Consensus 53 dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GG 88 (249)
.+..=|..|.+++++|.+...|++|+||||=| ||+
T Consensus 187 ~i~~~D~~ig~ll~~L~~~g~~~nT~vi~tSD-HG~ 221 (393)
T 2gso_A 187 AVRAVDAAIGRLLAGMQRDGTRARTNIIVVSD-HGM 221 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCGGGEEEEEECS-CCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEcC-CCC
Confidence 35567889999999999999999999999977 554
No 31
>2x98_A Alkaline phosphatase; hydrolase; 1.70A {Halobacterium salinarum}
Probab=48.42 E-value=15 Score=34.85 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=18.3
Q ss_pred HHHHHHHHhcCcCcCceEEEEEEe-CCCCc
Q 042607 61 VKEVYEALRSSPQWNEILFIITYD-EHGGF 89 (249)
Q Consensus 61 l~~v~eAL~~sP~W~~TliIITyD-E~GGf 89 (249)
++++++-...+ |++||||||=| |+||+
T Consensus 282 v~~a~~~~~~~--~~dTLIIVTADH~~GGl 309 (431)
T 2x98_A 282 AGQLVEYAETT--AEPTFLVSTGDHECGGL 309 (431)
T ss_dssp HHHHHHHHHHC--SSCEEEEEEEEEEESCC
T ss_pred HHHHHHHHhcC--CCCeEEEEeCcCCCCCc
Confidence 44444444443 67899999999 66775
No 32
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=47.32 E-value=10 Score=35.32 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=31.5
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 157 ~p~~mt~~e----I~~ii~~f~~AA~~a~~AGfDgVEIh~ 192 (402)
T 2hsa_B 157 KPRAIGTYE----ISQVVEDYRRSALNAIEAGFDGIEIHG 192 (402)
T ss_dssp CCEECCGGG----HHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCccCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 588999999 778899999999999999999876654
No 33
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=46.06 E-value=14 Score=33.67 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=30.7
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|+.||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 147 ~p~~mt~~e----I~~~i~~f~~aA~~a~~aGfDgVeih~ 182 (364)
T 1vyr_A 147 TPRALELDE----IPGIVNDFRQAVANAREAGFDLVELHS 182 (364)
T ss_dssp CCEECCGGG----HHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCcCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 588899999 667788999999999999999877643
No 34
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=44.54 E-value=11 Score=35.46 Aligned_cols=37 Identities=24% Similarity=0.341 Sum_probs=31.9
Q ss_pred cCCcccHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCCCeeEc
Q 042607 184 LVEEMTVAEGAKYVEDAFKK-FRGQCEKAEAEGVDESQIVVV 224 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~-f~~~~~~~~~~g~~~~~~~~~ 224 (249)
.|..||..| +++-++. |.+|++.|+++|.|.=+|-.-
T Consensus 153 ~pr~lt~~e----I~~ii~~~~~~aa~~a~~aGfdgveih~~ 190 (407)
T 3tjl_A 153 PVRALTTQE----VKDLVYEAYTNAAQKAMDAGFDYIELHAA 190 (407)
T ss_dssp CCEECCHHH----HHHHHHTHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCcCCHHH----HHHHHHHHHHHHHHHHHHhCCCeEEECCc
Confidence 588999999 7788889 999999999999998777543
No 35
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=44.28 E-value=14 Score=34.06 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=31.0
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 153 ~p~~mt~~e----I~~~i~~f~~AA~~a~~aGfDgVEih~ 188 (376)
T 1icp_A 153 RPRRLTTDE----IPQIVNEFRVAARNAIEAGFDGVEIHG 188 (376)
T ss_dssp CCEECCTTT----HHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCcCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 488899999 778889999999999999998877644
No 36
>3a52_A Cold-active alkaline phosphatase; hydrolase; 2.20A {Shewanella}
Probab=44.18 E-value=13 Score=34.84 Aligned_cols=34 Identities=24% Similarity=0.487 Sum_probs=26.1
Q ss_pred ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEe-CCCCc
Q 042607 53 DVSEGQKFVKEVYEALRSSPQWNEILFIITYD-EHGGF 89 (249)
Q Consensus 53 dv~~G~~~l~~v~eAL~~sP~W~~TliIITyD-E~GGf 89 (249)
.+.+=+..|+.+++.+..+| +||||||=| ||||+
T Consensus 241 e~~~fD~AV~~al~~~~~~~---dTLIIVTADH~~Ggl 275 (400)
T 3a52_A 241 EMQGFANAIEVVEQYIRQHP---DTLLVVTADHNTGGL 275 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHCC---SEEEEEECSCEETTC
T ss_pred HHHHHHHHHHHHHHHHhcCC---CcEEEEeccCCCCcc
Confidence 34455778899999998876 799999998 34554
No 37
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=43.70 E-value=14 Score=33.88 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=30.6
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCee
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIV 222 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~ 222 (249)
.|+.||..| +++.++.|.++++.|+++|.|.=+|-
T Consensus 147 ~p~~mt~~e----I~~~i~~f~~aA~~a~~aGfDgVeih 181 (365)
T 2gou_A 147 VPRAMTKAD----IAQVIADYRQAALNAMEAGFDGIELH 181 (365)
T ss_dssp CCEECCHHH----HHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCcCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 588999998 77888999999999999999877663
No 38
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=39.94 E-value=15 Score=35.73 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=31.2
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCee
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIV 222 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~ 222 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-
T Consensus 142 ~p~~~t~~e----i~~~i~~f~~aA~~a~~aGfDgVeih 176 (690)
T 3k30_A 142 QARAMTKQD----IDDLRRWHRNAVRRSIEAGYDIVYVY 176 (690)
T ss_dssp BCEECCHHH----HHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCcCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEEc
Confidence 588999999 78889999999999999999987763
No 39
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=39.75 E-value=15 Score=33.82 Aligned_cols=36 Identities=14% Similarity=0.324 Sum_probs=31.2
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 152 ~p~~mt~~e----I~~~i~~f~~aA~~a~~aGfDgVEIh~ 187 (377)
T 2r14_A 152 TPRALETDE----IPGIVEDYRQAAQRAKRAGFDMVEVHA 187 (377)
T ss_dssp CCEECCGGG----HHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCccCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 588899999 778889999999999999999877644
No 40
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=35.80 E-value=21 Score=32.92 Aligned_cols=36 Identities=28% Similarity=0.273 Sum_probs=31.0
Q ss_pred cCCcccHHHHHHHHH-HHHHHHHHHHHHHH-HcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVE-DAFKKFRGQCEKAE-AEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~-~a~~~f~~~~~~~~-~~g~~~~~~~~ 223 (249)
.|..||..| ++ +.++.|.++++.|+ ++|.|.=+|-.
T Consensus 159 ~pr~lt~~e----I~~~~i~~f~~AA~~a~~~aGfDgVEih~ 196 (379)
T 3aty_A 159 VPEELTDDE----VRDGIIPLFVEGAKNAIFKAGFDGVEIHG 196 (379)
T ss_dssp CCEECCHHH----HHHTHHHHHHHHHHHHHHTSCCSEEEEEE
T ss_pred CCccCCHHH----HhHHHHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 588999999 67 78899999999999 99999877644
No 41
>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A
Probab=35.56 E-value=34 Score=32.32 Aligned_cols=56 Identities=30% Similarity=0.479 Sum_probs=34.9
Q ss_pred hhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCCC
Q 042607 54 VSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQ 133 (249)
Q Consensus 54 v~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGfyDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~k 133 (249)
+..=|..|.+++++|... .+|||| =+||. |+ .. .+ .+....|||+|+.+|-++
T Consensus 307 Ie~vD~~IGrIL~~L~e~-----~lVIiT-SDHG~--dp----~~--------~~-------t~ht~~~VPlIi~~Pgi~ 359 (399)
T 3ot9_A 307 LQEYDARLPEVFAKLKED-----DLLLIT-ADHGN--DP----IH--------PG-------TDHTREYVPLLAYSPSMK 359 (399)
T ss_dssp HHHHHTTHHHHHHHCCTT-----EEEEEE-CSSBC--CS----SS--------SS-------SSCBCBCEEEEEECTTCT
T ss_pred HHHHHHHHHHHHHHhhcC-----CeEEEE-cCCCC--CC----CC--------CC-------cCCCCCeEeEEEEECCCC
Confidence 455577899999999752 355555 44554 21 11 00 012356999999999876
Q ss_pred CCe
Q 042607 134 RGT 136 (249)
Q Consensus 134 ~G~ 136 (249)
+|.
T Consensus 360 ~g~ 362 (399)
T 3ot9_A 360 EGG 362 (399)
T ss_dssp TCC
T ss_pred CCc
Confidence 653
No 42
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=33.93 E-value=29 Score=33.52 Aligned_cols=35 Identities=17% Similarity=0.315 Sum_probs=30.4
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCee
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIV 222 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~ 222 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-
T Consensus 127 ~p~~~t~~e----i~~~i~~~~~aA~~a~~aGfd~veih 161 (671)
T 1ps9_A 127 VPHELSHEE----ILQLIDNFARCAQLAREAGYDGVEVM 161 (671)
T ss_dssp CCEECCHHH----HHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCccCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEEc
Confidence 478899999 77788899999999999999987764
No 43
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=32.46 E-value=25 Score=34.67 Aligned_cols=36 Identities=11% Similarity=0.258 Sum_probs=31.6
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 184 LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 184 l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
.|..||..| +++-++.|.++++.|+++|.|.=+|-.
T Consensus 135 ~p~~~t~~e----I~~~i~~f~~aA~~a~~aGfDgVEih~ 170 (729)
T 1o94_A 135 YCKEMDLSD----IAQVQQFYVDAAKRSRDAGFDIVYVYG 170 (729)
T ss_dssp BCEECCHHH----HHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCcCCHHH----HHHHHHHHHHHHHHHHHcCCCEEEEcc
Confidence 588999998 778889999999999999999877654
No 44
>3nkq_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2; lysophospholipase D, autotaxin, ENPP2, lysophosphatidic acid hydrolase; HET: NAG BMA MAN NKQ; 1.70A {Mus musculus} PDB: 3nkm_A* 3nkn_A* 3nkp_A* 3nko_A* 3nkr_A* 2xrg_A* 2xr9_A*
Probab=29.48 E-value=43 Score=34.07 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=29.1
Q ss_pred ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeC
Q 042607 53 DVSEGQKFVKEVYEALRSSPQWNEILFIITYDE 85 (249)
Q Consensus 53 dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE 85 (249)
.+..=|..|++++++|.+...+++|+||||=|=
T Consensus 292 al~~vD~~IG~Ll~~Lk~~GL~dnT~VI~TSDH 324 (831)
T 3nkq_A 292 PLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDH 324 (831)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTTCEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEEEEcCC
Confidence 466678999999999999999999999999773
No 45
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=26.98 E-value=1.1e+02 Score=24.33 Aligned_cols=51 Identities=14% Similarity=0.115 Sum_probs=32.4
Q ss_pred HHHHhhhhcCCCCCCCCccccC-CcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 164 LVQMAATLNGDYKKDIYPHKLV-EEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 164 l~~la~~l~~~~~~~~~p~~l~-~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
||+|++.|.-... .+.+-++. ..|+|. +.+-+..|+++|++ .|+.+..+..
T Consensus 46 LCkL~N~l~P~~~-~~I~~kin~~~~~f~-----~~eNI~~FL~ac~~---~Gv~~~~lF~ 97 (144)
T 1ujo_A 46 LSKLVNSLYPEGS-KPVKVPENPPSMVFK-----QMEQVAQFLKAAED---YGVIKTDMFQ 97 (144)
T ss_dssp HHHHHHHHSCTTT-CCSCCCSSCCCSHHH-----HHHHHHHHHHHHHH---HTCCSSSCCC
T ss_pred HHHHHHHhCcccC-CCcceeecCCCchhH-----HHHHHHHHHHHHHH---cCcCccccCC
Confidence 8899999874210 12221222 234443 67889999999765 9998877754
No 46
>3e2d_A Alkaline phosphatase; cold-adaptation, metalloenzyme, dimer, psychrophilic bacteria, crystallography, hydrolase; 1.40A {Vibrio SP}
Probab=25.17 E-value=62 Score=31.46 Aligned_cols=34 Identities=26% Similarity=0.487 Sum_probs=24.1
Q ss_pred ChhHHHHHHHHHHHHHhcCcCcCceEEEEEEe-CCCCc
Q 042607 53 DVSEGQKFVKEVYEALRSSPQWNEILFIITYD-EHGGF 89 (249)
Q Consensus 53 dv~~G~~~l~~v~eAL~~sP~W~~TliIITyD-E~GGf 89 (249)
++.+-+..|+.+++-+.++| +||||||=| |+||+
T Consensus 287 E~~~fD~AV~~A~~~~~~~~---dTLIIVTADH~tGGl 321 (502)
T 3e2d_A 287 ELLKFDEAIQTVYEWAKDRE---DTIVIVTADHETGSF 321 (502)
T ss_dssp HHHHHHHHHHHHHHHHTTCS---SEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHhhcCC---CeEEEEeCCCCCCCc
Confidence 34455667777777776665 599999999 45653
No 47
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=21.80 E-value=1.2e+02 Score=24.61 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=33.3
Q ss_pred HHHHhhhhcCCCCCCCCccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 164 LVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 164 l~~la~~l~~~~~~~~~p~~l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
||+|++.+.-....... -+..+++. +.+-+..|+++|+ +.|+.+..+..
T Consensus 44 LCkL~N~l~P~~i~kI~---~~~~~~f~-----~~eNI~~FL~a~~---~~Gv~~~~lF~ 92 (159)
T 1p2x_A 44 LALLVQKFQPDKLIKIF---YSNELQFR-----HSDNINKFLDFIH---GIGLPEIFHFE 92 (159)
T ss_dssp HHHHHHHHCTTSCCCCC---CCSSCCTT-----HHHHHHHHHHHHH---HTTCCGGGCCC
T ss_pred HHHHHHHhCCCCccccc---cccCCcch-----HHHHHHHHHHHHH---HcCCCcccccC
Confidence 78999988755443221 12355665 5778999999876 69998876643
No 48
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=21.68 E-value=1.5e+02 Score=23.87 Aligned_cols=50 Identities=16% Similarity=0.266 Sum_probs=32.0
Q ss_pred HHHHhhhhcCCCCCCCCccccCC-cccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 164 LVQMAATLNGDYKKDIYPHKLVE-EMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 164 l~~la~~l~~~~~~~~~p~~l~~-~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
||+|++.|.-... .+.| ++-+ .|+|. +.+-+..|+++|+. .|+.+..+..
T Consensus 54 LCkL~N~l~P~~~-~~i~-kIn~~~~~F~-----~~eNI~~FL~ac~~---~Gv~~~~lF~ 104 (155)
T 1wym_A 54 LCELINALYPEGQ-APVK-KIQASTMAFK-----QMEQISQFLQAAER---YGINTTDIFQ 104 (155)
T ss_dssp HHHHHHHHSCTTT-CSCC-CCCCCCCHHH-----HHHHHHHHHHHHHH---HTCCTTTCCC
T ss_pred HHHHHHHhccccC-CCcC-cccCCCcccc-----HHHHHHHHHHHHHH---cCCCccccCC
Confidence 7899999875100 1222 2222 34443 67889999998764 9998877754
No 49
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=21.37 E-value=2.6e+02 Score=21.17 Aligned_cols=54 Identities=13% Similarity=0.338 Sum_probs=35.1
Q ss_pred hHHHHHhcCCCCCeEEEeccccCCCCCCCCCCCCCCChhHHHHHHHHHHHHHhcCcCcCceEEEEE
Q 042607 17 HFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQWNEILFIIT 82 (249)
Q Consensus 17 ~F~~D~~~G~LP~vSfI~P~~~d~~~~~~nd~HP~~dv~~G~~~l~~v~eAL~~sP~W~~TliIIT 82 (249)
++.+++...+ |.+.+|. .+.||.-...++..=..-++++++.|++. +-.+++++
T Consensus 53 ~~~~~~~~~~-pd~Vii~--------~G~ND~~~~~~~~~~~~~l~~li~~~~~~---~~~vil~~ 106 (190)
T 1ivn_A 53 RLPALLKQHQ-PRWVLVE--------LGGNDGLRGFQPQQTEQTLRQILQDVKAA---NAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHC-CSEEEEE--------CCTTTTSSSCCHHHHHHHHHHHHHHHHHT---TCEEEEEC
T ss_pred HHHHHHHhcC-CCEEEEE--------eeccccccCCCHHHHHHHHHHHHHHHHHc---CCCEEEEe
Confidence 4555555433 8888886 34577655455665566788999999886 33456664
No 50
>1cvr_A Gingipain R, RGPB; caspases, cysteine proteinase, hydrolase-hydrolase inhibitor; HET: H37; 2.00A {Porphyromonas gingivalis} SCOP: b.1.18.12 c.17.1.2
Probab=20.92 E-value=1.2e+02 Score=28.65 Aligned_cols=42 Identities=14% Similarity=0.145 Sum_probs=33.5
Q ss_pred CCCChhHHHHHHHHHHHHHhcC---cCcCceEEEEEEeCCCCccc
Q 042607 50 PSHDVSEGQKFVKEVYEALRSS---PQWNEILFIITYDEHGGFYD 91 (249)
Q Consensus 50 P~~dv~~G~~~l~~v~eAL~~s---P~W~~TliIITyDE~GGfyD 91 (249)
|..++++.+.+|.++++--... -.|.+.+++|.-|+.+++.|
T Consensus 114 pv~t~~ea~~~v~Kii~Ye~~~~~~g~Wr~~~l~ia~~~~~~~~d 158 (435)
T 1cvr_A 114 SCESKEDLKTQIDRTIHYERNITTEDKWLGQALCIASAEGGPSAD 158 (435)
T ss_dssp CCSSHHHHHHHHHHHHHHHHSCCTTCTTTTEEEEEECSCBCTTSG
T ss_pred ECCCHHHHHHHHHHHHHHhhCCCcccchhceEEEEecCCCCcccc
Confidence 3358899999999999988773 35999999999887766544
No 51
>2luz_A CALU16; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Micromonospora echinospora}
Probab=20.88 E-value=2.2e+02 Score=23.43 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=36.0
Q ss_pred ccHHHHHHHhhhhcCCCCCCCCccc-cCCcccHHHHHHHHHHHHHHHH
Q 042607 159 DFQQELVQMAATLNGDYKKDIYPHK-LVEEMTVAEGAKYVEDAFKKFR 205 (249)
Q Consensus 159 ~~~~~l~~la~~l~~~~~~~~~p~~-l~~~~~~~~~~~y~~~a~~~f~ 205 (249)
.|+..|..|++.|.|+......|.. ...-..-.|+..|++.+...+-
T Consensus 138 GW~~~Ld~L~~~L~g~~p~~p~~~~~~~~~~~s~e~~~f~~~~~~~W~ 185 (192)
T 2luz_A 138 GWEMALDFLGMFIRGDLPGGPVPEDAAEEFEPSPEMMRISQERGEAWA 185 (192)
T ss_dssp HHHHHHHHHHHHHTTCCSCCSCSSCSCSSSCSCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCCCCCCCCcchhhhhcCCHHHHHHHHHHHHHHH
Confidence 5888899999999998887665542 3344556788889999998884
No 52
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=20.82 E-value=82 Score=26.57 Aligned_cols=57 Identities=9% Similarity=0.165 Sum_probs=35.5
Q ss_pred ccHHH------HHHHhhhhcCCCCC--CCCccc----cCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 159 DFQQE------LVQMAATLNGDYKK--DIYPHK----LVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 159 ~~~~~------l~~la~~l~~~~~~--~~~p~~----l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
+|+.. ||+|++.|.-.... ..++.. -...++|. +.+-+..|+++|+ +.|+.+..+..
T Consensus 69 ~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~~~~~~~~~~~~F~-----~~eNI~~FL~ac~---~~Gvp~~~lFe 137 (193)
T 3i6x_A 69 ELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFR-----HTDNVIQWLNAMD---EIGLPKIFYPE 137 (193)
T ss_dssp GHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTTTCHHHHHSCCCGG-----GHHHHHHHHHHHH---HHTCCGGGCCC
T ss_pred HHHHHhccHHHHHHHHHHHCCCCCCccccCCcccccccCcccchH-----HHHHHHHHHHHHH---HcCCCcccCCC
Confidence 56655 78999998754331 111100 01245554 5678999999987 58998876644
No 53
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=20.69 E-value=1.5e+02 Score=22.31 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=32.1
Q ss_pred HHHHhhhhcCCCCCCCCccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeE
Q 042607 164 LVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVV 223 (249)
Q Consensus 164 l~~la~~l~~~~~~~~~p~~l~~~~~~~~~~~y~~~a~~~f~~~~~~~~~~g~~~~~~~~ 223 (249)
||+|++.+.-....... ...+++. +.+-+..|+++|+ +.|+.+..++.
T Consensus 34 LCkL~N~l~P~~v~ki~----~~~~~f~-----~~eNI~~Fl~a~~---~~Gv~~~~lF~ 81 (108)
T 1h67_A 34 LCELINKLQPGSVQKVN----DPVQNWH-----KLENIGNFLRAIK---HYGVKPHDIFE 81 (108)
T ss_dssp HHHHHHHHSTTSSTTCC----CTTSSHH-----HHHHHHHHHHHHH---HHTSCGGGSCC
T ss_pred HHHHHHHhCCCCccccc----ccccchH-----HHHHHHHHHHHHH---HcCCCcccccC
Confidence 78999998755443211 1234443 6678999999976 58998776544
Done!